BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 039715
         (805 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
          Length = 787

 Score = 1091 bits (2821), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 530/808 (65%), Positives = 626/808 (77%), Gaps = 62/808 (7%)

Query: 26  RGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKK 85
           RG S Q+A  TQ+           S SEFNSH+YA +LQ CIQ D+      +HC++LK+
Sbjct: 14  RGFSVQSAKLTQEFVGHV------SPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKR 67

Query: 86  GNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLF 145
           G CLDLFA N+LLN+YVK + L DA+KLFDEMPERNTISFVT IQGY  S +F+EA+ LF
Sbjct: 68  GGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELF 127

Query: 146 STLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVC 205
             LHREGHELNPF FT  LK+LVSM   EL   + AC++KLGH+SNAFVGTALIDA+SVC
Sbjct: 128 VRLHREGHELNPFVFTTILKLLVSMDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVC 187

Query: 206 GCVEFARKVFDGLF----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVL 249
           G V+ AR+VFDG+                 NDCF+EAL  FSQMR VGFKPNNFTFA V 
Sbjct: 188 GRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVF 247

Query: 250 KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
           KACLGL+   V KS HGCALK+ YE+DLYV VALLDLYTKSG+I +AR  FEE+PKKDVI
Sbjct: 248 KACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVI 307

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
           PWSFMIARYAQ+D S +AVE+F +MRQA V PNQFTF SVLQACATMEGL+LGNQIH  V
Sbjct: 308 PWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHV 367

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT-WNTMIVGYVQLGEVGKA 428
           +++GL SDVFVSNALMDVYAKCGRMENS+ LFAESP RN VT WNT+IVG+VQLG+  KA
Sbjct: 368 IKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKA 427

Query: 429 MIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDM 488
           + +F  MLE +V ATEVTYSS LRACASLAALEPG+Q+H LTVK  +D D+VV NALIDM
Sbjct: 428 LRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDM 487

Query: 489 YAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTF 548
           YAKCGSI DARLVFD+MN  +EVSWNAMISGYSMHGL                       
Sbjct: 488 YAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGL----------------------- 524

Query: 549 VGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIP 608
                AC+N GLL+QG+AYF SM+ ++GIEPCIEHYT MV LLGR GHLDKA KLI+ IP
Sbjct: 525 -----ACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIP 579

Query: 609 FQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS 668
           FQPSVM+WRALLGAC+IHN++E+GR+SAQH+L+ EP+D+ATHVLLSN+YA A+ W+  AS
Sbjct: 580 FQPSVMVWRALLGACVIHNDIELGRISAQHVLEMEPQDKATHVLLSNMYATAKRWDNVAS 639

Query: 669 -----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPD 717
                      KEPGLSWIE+QG VH F  GDTSH ++ +I GMLEWL+MK++KAGYIP+
Sbjct: 640 VRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPN 699

Query: 718 LSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISK 777
            + VL DV ++EKER LWVHSE+LAL+F + + P  SPIRI+KNLRICVDCH AIK ISK
Sbjct: 700 YNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISK 759

Query: 778 IVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +VQREI++RD++RFHHFQ+G CSCGD+W
Sbjct: 760 VVQREIVVRDINRFHHFQEGLCSCGDYW 787


>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
 gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
          Length = 820

 Score = 1068 bits (2761), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 520/832 (62%), Positives = 630/832 (75%), Gaps = 39/832 (4%)

Query: 1   MIRLFNYKTFSCKQLTHQSKINAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYA 60
           MIRL   K     Q  +  K N  L  ++ ++ L+ Q+ S+S+         EFN++ Y 
Sbjct: 1   MIRLLRSKLL---QHPNHCKSNTALCIITQRSFLA-QRTSHSSP--------EFNTYIYG 48

Query: 61  TSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPER 120
           + LQSCI+N D  T   +HC+++KKGNCLDLFA N+LLN YVK + LPDA KLFDEMP+R
Sbjct: 49  SLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDR 108

Query: 121 NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVF 180
           NT+SFVT IQGY+   +F EA+GLFS L  EGHELNPF F+  LK+LVS  WA+L   V 
Sbjct: 109 NTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVH 168

Query: 181 ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFE 224
           ACVYKLG DS+AFVGTALID +SVCG  E AR+VFD +                 N+CFE
Sbjct: 169 ACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFE 228

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           E+L  FS+MR VGFKPNNFTFA VLKAC+GL+   V K+ HGCA KT Y  +L+V V L+
Sbjct: 229 ESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELI 288

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
           DLY KSG++ +A ++FEEMPK DVIPWSFMIARYAQ++ S +A+E+FCRMR+  V PNQF
Sbjct: 289 DLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQF 348

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           T  S+LQACA++  L LGNQIH  VV+VGL  +VFVSNALMD+YAKCGRMENS++LF+ES
Sbjct: 349 TLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSES 408

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
           P    V+WNT+IVGYVQ G   KA+I+F  MLE QV  TEVTYSSVLRACA +AALEPG 
Sbjct: 409 PNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGS 468

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
           Q+H L+VK  YD + VV NALIDMYAKCG+I DARLVFDM+ + ++VSWNAMISGYS+HG
Sbjct: 469 QIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHG 528

Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY 584
           L  E LK F+ M +   +P+ +TFVG+LSACSN GLL++G+AYFKSMV  Y IEPC EHY
Sbjct: 529 LYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHY 588

Query: 585 TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEP 644
           T MV LLGR+GHLDKAAKL+  IPF+PSVM+WRALL AC+IHN+VE+GR+SAQ +L+ EP
Sbjct: 589 TCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHNDVELGRISAQRVLEIEP 648

Query: 645 EDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHA 693
           EDEATHVLLSNIYA AR W   AS           KEPGLSWIENQG VHYF  GDTSH 
Sbjct: 649 EDEATHVLLSNIYANARRWGNVASIRTSMKRKGIRKEPGLSWIENQGRVHYFSVGDTSHP 708

Query: 694 DMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPS 753
           D  +I GMLEWLNMK+R  GY+PD S+VL DV + +KE+ LWVHSE+LALA+ L + P  
Sbjct: 709 DTKLINGMLEWLNMKARNEGYVPDFSSVLLDVEDVDKEQRLWVHSERLALAYGLIRTPSI 768

Query: 754 SPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           SP+RIIKNLRIC DCH AIK+ISKIVQR+IIIRD++RFHHF +G CSCGD+W
Sbjct: 769 SPLRIIKNLRICADCHAAIKLISKIVQRDIIIRDMNRFHHFHEGICSCGDYW 820


>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score = 1011 bits (2613), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 486/783 (62%), Positives = 593/783 (75%), Gaps = 28/783 (3%)

Query: 51  VSEFNSHSYATSLQSCIQND-DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD 109
           +S  +SHSYA  LQ  I+N  D      +HC +LK+G  LDLFA N+LLN YV+ N L D
Sbjct: 29  LSALDSHSYAHMLQQIIRNGADPIAGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQD 88

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A+KLFDEMP+ NTISFVT  QGY+   QF +A+     + +EGHE+NPF FT  LK+LVS
Sbjct: 89  ASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVS 148

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------- 218
           M  A LC  + ACVYKLGH ++AFVGTALIDA+SV G V+ AR VFD +           
Sbjct: 149 MDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGM 208

Query: 219 ----FNDCF-EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY 273
                 +CF EE+L  F+QMR +G+KPNNFT +  LK+CLGL+   V KS HGCALK CY
Sbjct: 209 VACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCY 268

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
           + DL+V +ALL+LY KSGEI +A+R+FEEMPK D+IPWS MIARYAQ+D S +A++LF R
Sbjct: 269 DHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLR 328

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           MRQ  V PN FTF SVLQACA+   LDLG QIHS V++ GL S+VFVSNA+MDVYAKCG 
Sbjct: 329 MRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGE 388

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           +ENS++LF E P RN VTWNT+IVGYVQLG+  +AM +F+ MLE  +  TEVTYSSVLRA
Sbjct: 389 IENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRA 448

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
            ASLAALEPG+Q+H LT+K  Y+ D VVAN+LIDMYAKCG I DARL FD MN  +EVSW
Sbjct: 449 SASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSW 508

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA 573
           NAMI GYSMHG+S E L +FD+MQ    +PN LTFVGVLSACSN GLL +G+A+F+SM  
Sbjct: 509 NAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSK 568

Query: 574 NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGR 633
           +Y I+PCIEHYT MV LLGR G  D+A KLI  I +QPSVM+WRALLGAC+IH  V++GR
Sbjct: 569 DYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGR 628

Query: 634 LSAQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMV 682
           + AQH+L+ EP D+ATHVLLSN+YA A  W+           K   KEPGLSW+ENQG+V
Sbjct: 629 VCAQHVLEMEPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVV 688

Query: 683 HYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLA 742
           HYF  GDTSH D+ +I  MLEWLN K+R AGY+PD +AVL DV++DEKER+LWVHSE+LA
Sbjct: 689 HYFSVGDTSHPDIKLICAMLEWLNKKTRDAGYVPDCNAVLLDVQDDEKERHLWVHSERLA 748

Query: 743 LAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCG 802
           LA+ L + P S  IRIIKNLRIC+DCHT +K+ISK+VQREI+IRD++RFHHF+ G CSCG
Sbjct: 749 LAYGLIRTPLSCSIRIIKNLRICIDCHTVMKLISKVVQREIVIRDINRFHHFRHGVCSCG 808

Query: 803 DFW 805
           D+W
Sbjct: 809 DYW 811


>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 716

 Score = 1000 bits (2585), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 475/716 (66%), Positives = 566/716 (79%), Gaps = 27/716 (3%)

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
           MP+RNT+SFVT IQGY  S Q  E V LFS +HREGHELNPF FT  LK+LVS+  AEL 
Sbjct: 1   MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------N 220
             + AC+YKLGH+SNAFVGTALIDA++VCG V  AR+ FD +                 N
Sbjct: 61  YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120

Query: 221 DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
           D F+++L  F++MR VGF PN+FTFA VLKAC+GL+   V KS HGC LKTCYEMDLYV 
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVG 180

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
           V LLDLYTK G+ ++  R+FEEMPK DVIPWSFMI+RYAQ++ S +AVELF +MR+AFV 
Sbjct: 181 VGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVL 240

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           PNQFTF SVLQ+CA++E L LG Q+H  V++VGL  +VFVSNALMDVYAKCGR++NS++L
Sbjct: 241 PNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKL 300

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F E P RN VTWNTMIVGYVQ G+  KA+ ++  MLE QV A+EVTYSSVLRACASLAA+
Sbjct: 301 FMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAM 360

Query: 461 EPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY 520
           E G Q+H L++K  YD DVVV NALIDMYAKCGSI +ARLVFDM+++ +E+SWNAMISGY
Sbjct: 361 ELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGY 420

Query: 521 SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPC 580
           SMHGL  E LK F +MQ+    PN LTFV +LSACSN GLL+ G+ YFKSMV +YGIEPC
Sbjct: 421 SMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPC 480

Query: 581 IEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHIL 640
           +EHYT MV LLGR+GHLDKA KLIE IP +P+V +WRALLGAC+IHN+V++G +SAQ IL
Sbjct: 481 MEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQIL 540

Query: 641 DFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGD 689
             +P+DEATHVLLSNIYA  R W   AS           KEPGLSWIENQG+VHYF  GD
Sbjct: 541 QIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSVGD 600

Query: 690 TSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFK 749
           TSH DM +I GMLEWLNMK+ KAGY+PDL+AVLRDV +DEK+R+LWVHSE+LALAF L +
Sbjct: 601 TSHPDMKMISGMLEWLNMKTEKAGYVPDLNAVLRDVEDDEKKRHLWVHSERLALAFGLIR 660

Query: 750 MPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            P    IRI+KNLRIC DCH+AIK+ISKIVQR+IIIRD++RFHHFQDG CSCGD+W
Sbjct: 661 TPSRGHIRILKNLRICTDCHSAIKLISKIVQRDIIIRDMNRFHHFQDGICSCGDYW 716



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 133/490 (27%), Positives = 254/490 (51%), Gaps = 20/490 (4%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N   + T L+  +  +  + A ++H  + K G+  + F    L++ Y     +  A +
Sbjct: 38  ELNPFVFTTILKLLVSVECAELAYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQ 97

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
            FD +  ++ +S+   +  Y  + +F +++ LF+ +   G   N F F   LK  + +  
Sbjct: 98  AFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEA 157

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------------- 218
             +   V  CV K  ++ + +VG  L+D ++  G      +VF+ +              
Sbjct: 158 FSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISR 217

Query: 219 --FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
              ++   EA+  F QMR     PN FTFA VL++C  ++ +++ K  H   LK   + +
Sbjct: 218 YAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGN 277

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           ++V+ AL+D+Y K G + N+ ++F E+P ++ + W+ MI  Y Q+     A+ L+  M +
Sbjct: 278 VFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLE 337

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             V  ++ T+ SVL+ACA++  ++LG QIHSL ++     DV V NAL+D+YAKCG ++N
Sbjct: 338 CQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKN 397

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           +  +F    +R+ ++WN MI GY   G VG+A+  F  M E +    ++T+ S+L AC++
Sbjct: 398 ARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSN 457

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSW 513
              L+ G Q +  ++  +Y ++  + +   ++ +  + G +  A +L+ ++  + N   W
Sbjct: 458 AGLLDIG-QNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVW 516

Query: 514 NAMISGYSMH 523
            A++    +H
Sbjct: 517 RALLGACVIH 526



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 122/416 (29%), Positives = 208/416 (50%), Gaps = 20/416 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  ++A  L++CI  +      ++H  VLK    +DL+    LL++Y K     D  ++F
Sbjct: 141 NHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVF 200

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           +EMP+ + I +   I  Y  S+Q  EAV LF  + R     N F F + L+   S+   +
Sbjct: 201 EEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQ 260

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDC------------ 222
           L   V   V K+G D N FV  AL+D ++ CG ++ + K+F  L N              
Sbjct: 261 LGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYV 320

Query: 223 ----FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                ++AL+ +  M     + +  T++ VL+AC  L  + +    H  +LKT Y+ D+ 
Sbjct: 321 QSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVV 380

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V  AL+D+Y K G I NAR +F+ + ++D I W+ MI+ Y+   L  +A++ F  M++  
Sbjct: 381 VGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETE 440

Query: 339 VAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
             PN+ TFVS+L AC+    LD+G N   S+V   G+   +     ++ +  + G ++ +
Sbjct: 441 CVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKA 500

Query: 398 VELFAESPKRNHV-TWNTMIVGYVQLGEVGKAMIMFSKMLE--EQVPATEVTYSSV 450
           V+L  E P   +V  W  ++   V   +V   ++   ++L+   Q  AT V  S++
Sbjct: 501 VKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQILQIDPQDEATHVLLSNI 556


>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Glycine max]
          Length = 780

 Score =  996 bits (2576), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 482/779 (61%), Positives = 590/779 (75%), Gaps = 28/779 (3%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +SHSYA  LQ  I+N D     ++HC +LK G  LDLFA N+LLN YV    L DA+KLF
Sbjct: 2   DSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLF 61

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           DEMP  NT+SFVT  QG++ S QF  A  L   L REG+E+N F FT  LK+LVSM  A+
Sbjct: 62  DEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLAD 121

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
            C  V A VYKLGH ++AFVGTALIDA+SVCG V+ AR+VFDG++               
Sbjct: 122 TCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYA 181

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            N C E++L  F QMR +G++PNNFT +  LK+C GL+  +V KS HGCALK CY+ DLY
Sbjct: 182 ENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLY 241

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA- 337
           V +ALL+LYTKSGEI+ A++ FEEMPK D+IPWS MI+RYAQ+D S +A+ELFCRMRQ+ 
Sbjct: 242 VGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSS 301

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            V PN FTF SVLQACA++  L+LGNQIHS V++VGL S+VFVSNALMDVYAKCG +ENS
Sbjct: 302 VVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENS 361

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
           V+LF  S ++N V WNT+IVGYVQLG+  KA+ +FS ML   +  TEVTYSSVLRA ASL
Sbjct: 362 VKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASL 421

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
            ALEPG Q+H LT+K  Y+ D VVAN+LIDMYAKCG I DARL FD M+  +EVSWNA+I
Sbjct: 422 VALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALI 481

Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
            GYS+HGL  E L +FD+MQQ   +PN LTFVGVLSACSN GLL++G A+FKSM+ +YGI
Sbjct: 482 CGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGI 541

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQ 637
           EPCIEHYT MV LLGR+G  D+A KLI  IPFQPSVM+WRALLGAC+IH N+++G++ AQ
Sbjct: 542 EPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGKVCAQ 601

Query: 638 HILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFR 686
            +L+ EP+D+ATHVLLSN+YA A+ W+  A            KEPGLSW+ENQG+VHYF 
Sbjct: 602 RVLEMEPQDDATHVLLSNMYATAKRWDNVAYVRKNMKKKKVKKEPGLSWVENQGVVHYFT 661

Query: 687 AGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFA 746
            GDTSH ++ +I  MLEWL  K+R AGY+PD S VL DV +DEKER LW+HSE+LALAF 
Sbjct: 662 VGDTSHPNIKLIFAMLEWLYKKTRDAGYVPDCSVVLLDVEDDEKERLLWMHSERLALAFG 721

Query: 747 LFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           L ++P    IRIIKNLRICVDCH  IK++SKIVQREI+IRD++RFHHF+ G CSCGD+W
Sbjct: 722 LIQIPSGCSIRIIKNLRICVDCHAVIKLVSKIVQREIVIRDINRFHHFRQGVCSCGDYW 780



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 133/491 (27%), Positives = 249/491 (50%), Gaps = 21/491 (4%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N   + T L+  +  D   T +++H  V K G+  D F    L++ Y     +  A +
Sbjct: 101 EVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQ 160

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +FD +  ++ +S+   +  Y  +    +++ LF  +   G+  N F  +A LK    +  
Sbjct: 161 VFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEA 220

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF--------- 223
            ++   V  C  K+ +D + +VG AL++ ++  G +  A++ F+ +  D           
Sbjct: 221 FKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISR 280

Query: 224 -------EEALNFFSQMRAVG-FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
                  +EAL  F +MR      PNNFTFA VL+AC  L  + +    H C LK   + 
Sbjct: 281 YAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDS 340

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
           +++V+ AL+D+Y K GEI N+ ++F    +K+ + W+ +I  Y Q      A+ LF  M 
Sbjct: 341 NVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNML 400

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
              + P + T+ SVL+A A++  L+ G QIHSL ++     D  V+N+L+D+YAKCGR++
Sbjct: 401 GLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRID 460

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
           ++   F +  K++ V+WN +I GY   G   +A+ +F  M +      ++T+  VL AC+
Sbjct: 461 DARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACS 520

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVS 512
           +   L+ G + H  ++  +Y ++  + +   ++ +  + G   +A +L+ ++    + + 
Sbjct: 521 NAGLLDKG-RAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMV 579

Query: 513 WNAMISGYSMH 523
           W A++    +H
Sbjct: 580 WRALLGACVIH 590


>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
 gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
          Length = 721

 Score =  948 bits (2451), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 458/720 (63%), Positives = 547/720 (75%), Gaps = 27/720 (3%)

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +FDEMPERNT+SFVT I GY  S++F+EA  LF+ LH EGHELNPF FT  LK+LVSM W
Sbjct: 2   VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-----------GLF-- 219
           AEL   V  CV K+G+ SN F+GTALIDA+SV GCV  AR+VFD           G+   
Sbjct: 62  AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121

Query: 220 ---NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
              NDCF EAL FFSQMR  GFKPNNFTFA VLKACLGL      K+ H   LKT YE D
Sbjct: 122 YAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERD 181

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           LYV V LL+LYT+ G+  +A R F +MPK DVIPWSFMI+R+AQ+  S  A+E+FC+MR+
Sbjct: 182 LYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRR 241

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
           AFV PNQFTF SVLQA A +E LDL   IH   ++ GL +DVFVSNALM  YAKCG +E 
Sbjct: 242 AFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQ 301

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           S+ELF     RN V+WNT+IV YVQLG+  +A+ +FS ML  QV ATEVTYSS+LRACA+
Sbjct: 302 SMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACAT 361

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           LAALE G+QVHCLT K  Y  DV V NALIDMYAKCGSI DAR +FDM++  ++VSWNA+
Sbjct: 362 LAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAI 421

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           I GYSMHGL  E +K+F+LM++   +P+ LTFVGVLSACSN G L++G+ YF SM  +YG
Sbjct: 422 ICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYG 481

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
           IEPC+EHYT MV L+GR+G+LD+A K IE IPF+PSVMIWRALLGAC+IHN+VE+GR+SA
Sbjct: 482 IEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRISA 541

Query: 637 QHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYF 685
           Q +L+ EP DEA+HVLLSNIYA AR W            K   KEPGLSWIENQG VH F
Sbjct: 542 QRVLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQGNVHCF 601

Query: 686 RAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAF 745
              DTSHAD+ +I GMLE+LNMK+RKAGY P L+AVL DV +DEKER LW+HSE+LALAF
Sbjct: 602 TVADTSHADLKLINGMLEFLNMKTRKAGYSPQLNAVLLDVEDDEKERLLWLHSERLALAF 661

Query: 746 ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            L +MP   PIRIIKNLRICVDCH+ IK+ISKIV R+II+RD++RFHHF++G CSC D+W
Sbjct: 662 GLVRMPAGCPIRIIKNLRICVDCHSVIKLISKIVGRDIIVRDMNRFHHFENGSCSCADYW 721



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 139/490 (28%), Positives = 247/490 (50%), Gaps = 20/490 (4%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N   + T L+  +  +  +    +H  VLK G   + F    L++ Y     +  A +
Sbjct: 43  ELNPFVFTTVLKLLVSMEWAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMARE 102

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +FDE+  ++ +S+   I  Y  +  F EA+  FS +   G + N F F   LK  + +  
Sbjct: 103 VFDEISSKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQN 162

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF-DGLFNDCF-------- 223
            +    V   V K  ++ + +VG  L++ ++ CG  + A + F D   ND          
Sbjct: 163 FDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISR 222

Query: 224 -------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
                  E+AL  F QMR     PN FTF+ VL+A   ++++ ++K+ HG ALK     D
Sbjct: 223 FAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTD 282

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           ++V+ AL+  Y K G I  +  +FE +  ++ + W+ +I  Y Q      A+ LF  M +
Sbjct: 283 VFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLR 342

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             V   + T+ S+L+ACAT+  L+LG Q+H L  +     DV V NAL+D+YAKCG +++
Sbjct: 343 YQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKD 402

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           +  +F     R+ V+WN +I GY   G   +A+ MF+ M E +    E+T+  VL AC++
Sbjct: 403 ARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSN 462

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSW 513
              L+ G Q +  ++K +Y ++  + +   ++ +  + G++  A + + D+  + + + W
Sbjct: 463 TGRLDEGKQ-YFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIW 521

Query: 514 NAMISGYSMH 523
            A++    +H
Sbjct: 522 RALLGACVIH 531



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 121/477 (25%), Positives = 218/477 (45%), Gaps = 47/477 (9%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N+ ++A  L++C+   +     T+HC VLK     DL+    LL +Y +     DA + F
Sbjct: 146 NNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAF 205

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
            +MP+ + I +   I  +  S Q  +A+ +F  + R     N F F++ L+    +   +
Sbjct: 206 GDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLD 265

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--NDCF--------- 223
           L   +     K G  ++ FV  AL+  ++ CGC+E + ++F+ L   ND           
Sbjct: 266 LSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYV 325

Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                E AL+ FS M     +    T++ +L+AC  L  + +    H    KT Y  D+ 
Sbjct: 326 QLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVA 385

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V  AL+D+Y K G I +AR +F+ +  +D + W+ +I  Y+   L ++A+++F  M++  
Sbjct: 386 VGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETK 445

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQ-IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
             P++ TFV VL AC+    LD G Q   S+    G+   +     ++ +  + G ++ +
Sbjct: 446 CKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQA 505

Query: 398 VELFAESPKRNHV-TWNTM-----IVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVL 451
           V+   + P    V  W  +     I   V+LG +    ++    LE +  A+ V  S++ 
Sbjct: 506 VKFIEDIPFEPSVMIWRALLGACVIHNDVELGRISAQRVL---ELEPRDEASHVLLSNIY 562

Query: 452 ---RACASLAAL-----------EPGM-------QVHCLTVKANYDMDVVVANALID 487
              R   ++A +           EPG+        VHC TV      D+ + N +++
Sbjct: 563 ARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQGNVHCFTVADTSHADLKLINGMLE 619


>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial; Flags: Precursor
 gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
 gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 822

 Score =  901 bits (2328), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/783 (55%), Positives = 557/783 (71%), Gaps = 32/783 (4%)

Query: 51  VSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDA 110
           +   +SH+Y   L+ CIQ +D  +A  IHC +LKKG+CLDLFATN+LLN YVK     DA
Sbjct: 44  IPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDA 103

Query: 111 TKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSM 170
             LFDEMPERN +SFVT  QGY       + +GL+S LHREGHELNP  FT+FLK+ VS+
Sbjct: 104 LNLFDEMPERNNVSFVTLAQGYACQ----DPIGLYSRLHREGHELNPHVFTSFLKLFVSL 159

Query: 171 GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------- 219
             AE+CP + + + KLG+DSNAFVG ALI+A+SVCG V+ AR VF+G+            
Sbjct: 160 DKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIV 219

Query: 220 -----NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
                N  FE++L   S MR  GF PNN+TF   LKA +GL     AK  HG  LKTCY 
Sbjct: 220 SCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYV 279

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
           +D  V V LL LYT+ G++S+A ++F EMPK DV+PWSFMIAR+ Q     +AV+LF RM
Sbjct: 280 LDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM 339

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
           R+AFV PN+FT  S+L  CA  +   LG Q+H LVV+VG   D++VSNAL+DVYAKC +M
Sbjct: 340 REAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKM 399

Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
           + +V+LFAE   +N V+WNT+IVGY  LGE GKA  MF + L  QV  TEVT+SS L AC
Sbjct: 400 DTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGAC 459

Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
           ASLA+++ G+QVH L +K N    V V+N+LIDMYAKCG I  A+ VF+ M   +  SWN
Sbjct: 460 ASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWN 519

Query: 515 AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
           A+ISGYS HGL  + L++ D+M+ R  +PN LTF+GVLS CSN GL++QG+  F+SM+ +
Sbjct: 520 ALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRD 579

Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL 634
           +GIEPC+EHYT MV LLGR+G LDKA KLIEGIP++PSVMIWRA+L A +  NN E  R 
Sbjct: 580 HGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARR 639

Query: 635 SAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVH 683
           SA+ IL   P+DEAT+VL+SN+YA A+ W   AS           KEPGLSWIE+QG VH
Sbjct: 640 SAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVH 699

Query: 684 YFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLAL 743
           YF  G + H DM +I GMLEWLNMK+ +AGY+PD +AVL D+ ++EK++ LWVHSE+LAL
Sbjct: 700 YFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLAL 759

Query: 744 AFALFKMPPS-SPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCG 802
           A+ L +MP S + I I+KNLRIC DCH+A+K+IS IVQR+++IRD++RFHHF  G CSCG
Sbjct: 760 AYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCG 819

Query: 803 DFW 805
           D W
Sbjct: 820 DHW 822


>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 822

 Score =  897 bits (2317), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 442/807 (54%), Positives = 565/807 (70%), Gaps = 39/807 (4%)

Query: 27  GLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKG 86
           G S Q A S+ Q S+S        V   +SH+Y T L+ CI+ +D  +A  IHC +LKKG
Sbjct: 27  GFSVQTAESSVQWSDSV-------VPCLDSHAYGTMLRRCIRKNDSVSAKAIHCDILKKG 79

Query: 87  NCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFS 146
           +CLDLFATN+LLN YVK     DA  LFDEMPERN +S+VT  QGY       + VGL+S
Sbjct: 80  SCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSYVTLTQGYACQ----DPVGLYS 135

Query: 147 TLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCG 206
            LHREGHELNP  FT+FLK+ VS+  AE+C  + + + KLG+DSNAFVG ALI+A+SVCG
Sbjct: 136 RLHREGHELNPHVFTSFLKLFVSLDKAEICWWLHSPIVKLGYDSNAFVGAALINAYSVCG 195

Query: 207 CVEFARKVFDGLF----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLK 250
            V+ AR VF+G+                 N CFE++L   S+M   GF PNN+TF   LK
Sbjct: 196 SVDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALK 255

Query: 251 ACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIP 310
           A +GL     AKS HG  LKTCYE+D  V V LL LYT+ G++S+A ++F EMPK DV+P
Sbjct: 256 ASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVP 315

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV 370
           WSFMIAR+ Q      AV++F RMR+ FV PN+FT  S+L  CA  +   LG Q+H LVV
Sbjct: 316 WSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVV 375

Query: 371 RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMI 430
           +VG   DV+VSNAL+DVYAKC +M+ +V+LFAE   +N V+WNT+IVGY  LGE GKA+ 
Sbjct: 376 KVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALN 435

Query: 431 MFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYA 490
           MF + L  QV  TEVT+SS L ACASLA++E G+QVH L +K N    V V+N+LIDMYA
Sbjct: 436 MFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYA 495

Query: 491 KCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVG 550
           KCG I  A+ VF+ M   +  SWNA+ISGYS HGL  + L++FD+M+    +PN LTF+G
Sbjct: 496 KCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLG 555

Query: 551 VLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQ 610
           VLS CSN GL++QG+  F+SM+ ++GIEPC+EHYT MV L GR+G LDKA  LIEGIP++
Sbjct: 556 VLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYE 615

Query: 611 PSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW------- 663
           PSVMIWRA+L A +   N E  R SA+ IL   P+DEAT+VLLSN+YA A+ W       
Sbjct: 616 PSVMIWRAMLSASMNQYNEEFARRSAEEILKINPKDEATYVLLSNMYAGAKQWANVASIR 675

Query: 664 ----EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLS 719
               EK   KEPGLSWIE+QG VH+F  G + H DM +I GMLEWLNMK+ +AGY+PD +
Sbjct: 676 KSMKEKGVKKEPGLSWIEHQGDVHFFSVGSSDHPDMKLINGMLEWLNMKATRAGYVPDRN 735

Query: 720 AVLRDVREDEKERYLWVHSEKLALAFALFKMPPS-SPIRIIKNLRICVDCHTAIKIISKI 778
           AVL D+ ++EK++ LWVHSE+LALA+ L +MP S + I I+KNLRIC DCH+A+K+IS I
Sbjct: 736 AVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSI 795

Query: 779 VQREIIIRDVHRFHHFQDGCCSCGDFW 805
           VQR+++IRD++RFHHF  G CSC D W
Sbjct: 796 VQRDLVIRDMNRFHHFHAGVCSCDDHW 822


>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
 gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
          Length = 825

 Score =  803 bits (2074), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/809 (49%), Positives = 538/809 (66%), Gaps = 34/809 (4%)

Query: 26  RGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKK 85
           R L+A AAL  Q   +   +    ++ + +S++ A  LQ CI   D +    +H +V+++
Sbjct: 22  RNLAANAAL--QWLDDELAS---LALPKLDSYACARLLQRCIARGDARAGRAVHARVVQR 76

Query: 86  GNC--LDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVG 143
           G    LD F  NVLLN+Y KL  L  A +LFD MPERN +SFVT +QGY +   F EA G
Sbjct: 77  GGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGYALRGGFEEAAG 136

Query: 144 LFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFS 203
           LF  L REGHE+N F  T  LKVLV+M    L  C+ AC  KLGHD NAFVG++LIDA+S
Sbjct: 137 LFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYS 196

Query: 204 VCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRAVGFKPNNFTFAF 247
           +CG V  AR VFDG+                 ND  E+ALN FS+MR  G KPN F    
Sbjct: 197 LCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTS 256

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
           VLKA + L +  + K  HGCA+KT  + + +V  ALLD+Y K G I +AR +FE +P  D
Sbjct: 257 VLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDD 316

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
           VI WSF+I+RYAQ+  +  A E+F RM ++ V PN+F+   VLQACA +  LDLG QIH+
Sbjct: 317 VILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHN 376

Query: 368 LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK 427
           LV+++G  S++FV NALMDVYAKC  MENS+E+F      N V+WNT+IVGY Q G    
Sbjct: 377 LVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAED 436

Query: 428 AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALID 487
           A+ +F +M    V +T+VT+SSVLRACA+ A+++  +Q+H L  K+ ++ D +V N+LID
Sbjct: 437 ALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLID 496

Query: 488 MYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLT 547
            YAKCG I DA  VF+ +   + VSWNA+ISGY++HG + + L++F+ M +   +PN++T
Sbjct: 497 TYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVT 556

Query: 548 FVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGI 607
           FV +LS C + GL+ QG + F SM  ++ I+P ++HYT +V LLGRAG L+ A K I  I
Sbjct: 557 FVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDI 616

Query: 608 PFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA 667
           P  PS M+WRALL +C++H NV +G+ SA+ +L+ EP+DE T+VLLSN+YA A   ++ A
Sbjct: 617 PSTPSPMVWRALLSSCVVHKNVALGKFSAEKVLEIEPQDETTYVLLSNMYAAAGILDQVA 676

Query: 668 -----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIP 716
                       KE GLSW+E +G VH F  G   H DM II  MLEWLN+K+ + GY+P
Sbjct: 677 LLRKSMRNIGVKKEVGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLKASREGYVP 736

Query: 717 DLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIIS 776
           D++ VL DV E+EK R LWVHSE+LALA+ L   PP  PIRI+KNLR C+DCHT  K+IS
Sbjct: 737 DINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMKNLRSCLDCHTVFKVIS 796

Query: 777 KIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           KIVQREI++RD++RFHHF +G CSCGD+W
Sbjct: 797 KIVQREIVVRDINRFHHFDEGICSCGDYW 825


>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 823

 Score =  794 bits (2051), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/817 (49%), Positives = 539/817 (65%), Gaps = 35/817 (4%)

Query: 19  SKINAWL-RGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMT 77
           S+IN  L R L+A  AL  Q   +   +    ++ + +S++ A  LQ CI   D +    
Sbjct: 12  SQINGLLSRNLAANEAL--QWLDDELAS---LALPKLDSYACARFLQRCIARGDARAGRA 66

Query: 78  IHCQVLKKGNC--LDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVS 135
           +H +V+++G    LD F  NVLLN Y KL  L  A +LFD MPERN +SFVT +QGY + 
Sbjct: 67  VHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGYALR 126

Query: 136 SQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVG 195
            +F EA+ LF  L REGHE+N F  T  LKVLV+M    L   + AC  KLGHD NAFVG
Sbjct: 127 GEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNAFVG 186

Query: 196 TALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRAVGFK 239
           TALIDA+S+CG V  AR VFDG+                 ND  E ALN FS+MR  GFK
Sbjct: 187 TALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFK 246

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           PN F     LKA + L +  + K  HGC++KT Y+ + +V  ALLD+Y K G+I +A  I
Sbjct: 247 PNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAI 306

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL 359
           FE +P  DVI WSF+I+RYAQ+  +  A E+F RM ++FV PN+F+   VLQACA +  L
Sbjct: 307 FEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFL 366

Query: 360 DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGY 419
           +LG QIH+L +++G  S++FV NALMD+YAKC  MENS+E+F+     N V+WNT+IVGY
Sbjct: 367 ELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGY 426

Query: 420 VQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDV 479
            Q G    A+ +F +M    + +T+VT+SSVLRACA+ ++++  +Q+H L  K+ ++ D 
Sbjct: 427 CQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDT 486

Query: 480 VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
           +V N+LID YAKCG I DA  VF+ + + + VSWN++IS Y++HG +   L++FD M + 
Sbjct: 487 IVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALELFDRMNKS 546

Query: 540 GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDK 599
             + N++TFV +LS C + GL+ QG   F SM+ ++ I+P +EHYT +V LLGRAG L  
Sbjct: 547 DIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTD 606

Query: 600 AAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAM 659
           A K I  IP  PS M+WRALL +C++H NV +GR +A+ +LD EP DE T+VLLSN+YA 
Sbjct: 607 ALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVLDIEPHDETTYVLLSNMYAA 666

Query: 660 A------RSWEKA-----ASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMK 708
           A        W K+       KE GLSW+E +G VH F  G   H DM II  MLEWLN+K
Sbjct: 667 AGILDEVALWRKSMRNVGVKKEAGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLK 726

Query: 709 SRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDC 768
           + + GY+PD++ VL DV E+EK R LWVHSE+LALA+ L   PP  PIRI+KNLR C+DC
Sbjct: 727 ASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMKNLRSCLDC 786

Query: 769 HTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           HT  K+ISKIVQREII+RD++RFHHF++G CSCGD+W
Sbjct: 787 HTMFKVISKIVQREIIVRDINRFHHFEEGICSCGDYW 823


>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g13230, mitochondrial-like [Brachypodium distachyon]
          Length = 1206

 Score =  786 bits (2029), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/809 (48%), Positives = 531/809 (65%), Gaps = 32/809 (3%)

Query: 26   RGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKK 85
            R L+A AAL   Q      T + F     +S++YA  LQ C+   D +    +H  V++ 
Sbjct: 401  RDLAANAAL---QWLEDELTSLAFPWPGVDSYAYARLLQGCVARGDARGGRAVHGHVVRS 457

Query: 86   GNC--LDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVG 143
            G    LDLF  NVLLN+Y K+     A ++FD +PERN +SFVT +QG+ +  +F EA  
Sbjct: 458  GGLARLDLFCANVLLNMYTKVGPFGSAHRVFDGLPERNMVSFVTLVQGHALRGEFEEASA 517

Query: 144  LFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFS 203
            LF  L  EGHE+N F  T  LK++V+M    L   V AC  KLGHD NAFVG+ALIDA+S
Sbjct: 518  LFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYS 577

Query: 204  VCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRAVGFKPNNFTFAF 247
            +CG V  AR+VFDG+                 NDC E  L  FS+MR    K N F    
Sbjct: 578  MCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTS 637

Query: 248  VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
            VL+A + L ++ + K  H C++KT Y+ + +V  ALLD+Y K G I +AR  FE +   D
Sbjct: 638  VLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDD 697

Query: 308  VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
            VI WS MI+RYAQ + +  A ELF RM ++ V+PN+F+  SVLQACA M  LDLG QIH+
Sbjct: 698  VILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHN 757

Query: 368  LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK 427
              +++G  S++FV NAL+D+YAKC  ME+S+E+F+     N V+WNT+IVGY + G    
Sbjct: 758  HAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEA 817

Query: 428  AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALID 487
            A+ +F +M    VP+T+VTYSSVLRACAS A++    QVHCL  K+ ++ D +V+N+LID
Sbjct: 818  ALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLID 877

Query: 488  MYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLT 547
             YAKCG I DAR +F+ + + + VSWNA+ISGY++HG +A   ++FD+M +   + N++T
Sbjct: 878  SYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDIT 937

Query: 548  FVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGI 607
            FV +LS C + GL+ QG + F SM  ++GIEP +EHYT +V LLGRAG L+ A   I  I
Sbjct: 938  FVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDI 997

Query: 608  PFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA 667
            P  PS M+WRALL +CI+H NVE+GR SA+ +L+ EP+DE T+VLLSN+Y+ A S ++ A
Sbjct: 998  PSAPSAMVWRALLSSCIVHKNVELGRFSAEKVLEIEPQDETTYVLLSNMYSAAGSLDQVA 1057

Query: 668  -----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIP 716
                        KEPGLSW+E +G VH F  G   H  M +I  MLEWLN+K+ + GY+P
Sbjct: 1058 FFRKSMRNIGVRKEPGLSWVEIKGEVHAFSVGSEDHPCMRVINAMLEWLNLKAIREGYVP 1117

Query: 717  DLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIIS 776
            D   VL D+ E++K R LWVHSE+LALA+ L   PP  PIRI+KNLR C+DCH   K+IS
Sbjct: 1118 DTDEVLHDLEEEQKVRMLWVHSERLALAYGLVMTPPGHPIRIMKNLRSCLDCHAIFKVIS 1177

Query: 777  KIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            KIV++EII+RD++RFHHF++G CSCGD+W
Sbjct: 1178 KIVKQEIIVRDINRFHHFEEGTCSCGDYW 1206


>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 837

 Score =  785 bits (2028), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/838 (47%), Positives = 534/838 (63%), Gaps = 40/838 (4%)

Query: 1   MIRLFN----YKTFSCKQLTHQSKINAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNS 56
           M+R  N      T SC    H+       RG +A AA         T+  I  SV   +S
Sbjct: 7   MLRPLNRGLLLPTLSCPVAPHR-------RGFAAYAAALQWLEDELTSLAILPSVPGVDS 59

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNC--LDLFATNVLLNVYVKLNRLPDATKLF 114
            + A  LQ CI   D +    +H  V+++G    LDLF  NVLLN+Y KL  L  A +LF
Sbjct: 60  FACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLF 119

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D MPERN +SFVT +Q +     F  A  LF  L  EGHE+N F  T  LK+ ++M  A 
Sbjct: 120 DRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAG 179

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
           L   V +C +KLGHD NAFVG+ LIDA+S+C  V  A  VF+G+                
Sbjct: 180 LAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYS 239

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            NDC E A   FS+MR  G KPN F    VLKA + L ++ + K  HGCA+KT  + + +
Sbjct: 240 ENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPH 299

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V  ALLD+Y K G+I +AR  FE +P  DVI  SFMI+RYAQ++ +  A ELF R+ ++ 
Sbjct: 300 VGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSS 359

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           V PN+++  SVLQAC  M  LD G QIH+  +++G  SD+FV NALMD YAKC  M++S+
Sbjct: 360 VLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSL 419

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
           ++F+     N V+WNT++VG+ Q G   +A+ +F +M   Q+P T+VTYSSVLRACAS A
Sbjct: 420 KIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTA 479

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           ++    Q+HC   K+ ++ D V+ N+LID YAKCG I DA  VF  + + + +SWNA+IS
Sbjct: 480 SIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIIS 539

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           GY++HG +A+ L++FD M +     N++TFV +LS CS+ GL+  G + F SM  ++GI+
Sbjct: 540 GYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIK 599

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P +EHYT +V LLGRAG L+ A + I  IP  PS M+WRALL +CIIH NV +GR SA+ 
Sbjct: 600 PSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEK 659

Query: 639 ILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRA 687
           IL+ EP+DE T+VLLSN+YA A S ++ A            K PGLSW+E +G +H F  
Sbjct: 660 ILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSV 719

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFAL 747
           G   H DM +I  MLEWLN+K+ + GYIPD++ VL DV +++K R LWVHSE+LALA+ L
Sbjct: 720 GSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGL 779

Query: 748 FKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
              PP  PIRI+KNLR C+DCHTA  +ISKIV+REII+RD++RFHHF+DG CSCGD+W
Sbjct: 780 VMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCGDYW 837


>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Vitis vinifera]
          Length = 611

 Score =  778 bits (2009), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/576 (63%), Positives = 457/576 (79%), Gaps = 12/576 (2%)

Query: 241 NNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIF 300
           N+  +A  L+ C+  D     K  H   LK    +DL+    LL++Y KS  + +A ++F
Sbjct: 37  NSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLF 96

Query: 301 EEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLD 360
           +EMP+++ I +  +I  YA++   ++A+ELF R+ +  V PNQFTF SVLQACATMEGL+
Sbjct: 97  DEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHRE-VLPNQFTFASVLQACATMEGLN 155

Query: 361 LGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYV 420
           LGNQIH  V+++GL SDVFVSNALMDVYAKCGRMENS+ELFAESP RN VTWNT+IVG+V
Sbjct: 156 LGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHV 215

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV 480
           QLG+  KA+ +F  MLE +V ATEVTYSS LRACASLAALEPG+Q+H LTVK  +D D+V
Sbjct: 216 QLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIV 275

Query: 481 VANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG 540
           V NALIDMYAKCGSI DARLVFD+MN  +EVSWNAMISGYSMHGL  E L++FD MQ+  
Sbjct: 276 VTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETE 335

Query: 541 WRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKA 600
            +P+ LTFVGVLSAC+N GLL+QG+AYF SM+ ++GIEPCIEHYT MV LLGR GHLDKA
Sbjct: 336 VKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKA 395

Query: 601 AKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMA 660
            KLI+ IPFQPSVM+WRALLGAC+IHN++E+GR+SAQ +L+ EP+D+ATHVLLSN+YA A
Sbjct: 396 VKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATA 455

Query: 661 RSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKS 709
           + W+  AS           KEPGLSWIE+QG VH F  GDTSH ++ +I GMLEWL+MK+
Sbjct: 456 KRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKT 515

Query: 710 RKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCH 769
           +KAGYIP+ + VL DV ++EKER LWVHSE+LAL+F + + P  SPIRI+KNLRICVDCH
Sbjct: 516 KKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCH 575

Query: 770 TAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            AIK ISK+VQREI++RD++RFHHFQ+G CSCGD+W
Sbjct: 576 AAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 611



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 172/503 (34%), Positives = 260/503 (51%), Gaps = 48/503 (9%)

Query: 26  RGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKK 85
           RG S Q+A  TQ+           S SEFNSH+YA +LQ CIQ D+      +HC++LK+
Sbjct: 14  RGFSVQSAKLTQEFVGHV------SPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKR 67

Query: 86  GNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLF 145
           G CLDLFA N+LLN+YVK + L DA+KLFDEMPERNTISFVT IQGY  S +F+EA+ LF
Sbjct: 68  GGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELF 127

Query: 146 STLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVC 205
             LHRE    N F F + L+   +M    L   +   V K+G  S+ FV  AL+D ++ C
Sbjct: 128 VRLHREVLP-NQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKC 186

Query: 206 GCVEFARKVF-------DGLFNDCF---------EEALNFFSQMRAVGFKPNNFTFAFVL 249
           G +E + ++F       D  +N            E+AL  F  M     +    T++  L
Sbjct: 187 GRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSAL 246

Query: 250 KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
           +AC  L  +      H   +KT ++ D+ V  AL+D+Y K G I +AR +F+ M K+D +
Sbjct: 247 RACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEV 306

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ-IHSL 368
            W+ MI+ Y+   L  +A+ +F +M++  V P++ TFV VL ACA    LD G     S+
Sbjct: 307 SWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSM 366

Query: 369 VVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHV-TWNTMIVGYVQLGEVGK 427
           +   G+   +     ++ +  + G ++ +V+L  E P +  V  W  ++   V   ++  
Sbjct: 367 IQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIEL 426

Query: 428 AMIMFSKML--EEQVPATEVTYSSVLRACA---SLAAL-----------EPGMQ------ 465
             I   ++L  E Q  AT V  S++        ++A++           EPG+       
Sbjct: 427 GRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQG 486

Query: 466 -VHCLTVKANYDMDVVVANALID 487
            VH  TV      +V V N +++
Sbjct: 487 TVHSFTVGDTSHPEVRVINGMLE 509


>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
          Length = 1012

 Score =  745 bits (1923), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/818 (46%), Positives = 515/818 (62%), Gaps = 40/818 (4%)

Query: 1   MIRLFN----YKTFSCKQLTHQSKINAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNS 56
           M+R  N      T SC    H+       RG +A AA         T+  I  SV   +S
Sbjct: 7   MLRPLNRGLLLPTLSCPVAPHR-------RGFAAYAAALQWLEDELTSLAILPSVPGVDS 59

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNC--LDLFATNVLLNVYVKLNRLPDATKLF 114
            + A  LQ CI   D +    +H  V+++G    LDLF  NVLLN+Y KL  L  A +LF
Sbjct: 60  FACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLF 119

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D MPERN +SFVT +Q +     F  A  LF  L  EGHE+N F  T  LK+ ++M  A 
Sbjct: 120 DRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAG 179

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
           L   V +C +KLGHD NAFVG+ LIDA+S+C  V  A  VF+G+                
Sbjct: 180 LAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYS 239

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            NDC E A   FS+MR  G KPN F    VLKA + L ++ + K  HGCA+KT  + + +
Sbjct: 240 ENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPH 299

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V  ALLD+Y K G+I +AR  FE +P  DVI  SFMI+RYAQ++ +  A ELF R+ ++ 
Sbjct: 300 VGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSS 359

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           V PN+++  SVLQAC  M  LD G QIH+  +++G  SD+FV NALMD YAKC  M++S+
Sbjct: 360 VLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSL 419

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
           ++F+     N V+WNT++VG+ Q G   +A+ +F +M   Q+P T+VTYSSVLRACAS A
Sbjct: 420 KIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTA 479

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           ++    Q+HC   K+ ++ D V+ N+LID YAKCG I DA  VF  + + + +SWNA+IS
Sbjct: 480 SIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIIS 539

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           GY++HG +A+ L++FD M +     N++TFV +LS CS+ GL+  G + F SM  ++GI+
Sbjct: 540 GYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIK 599

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P +EHYT +V LLGRAG L+ A + I  IP  PS M+WRALL +CIIH NV +GR SA+ 
Sbjct: 600 PSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEK 659

Query: 639 ILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRA 687
           IL+ EP+DE T+VLLSN+YA A S ++ A            K PGLSW+E +G +H F  
Sbjct: 660 ILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSV 719

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFAL 747
           G   H DM +I  MLEWLN+K+ + GYIPD++ VL DV +++K R LWVHSE+LALA+ L
Sbjct: 720 GSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGL 779

Query: 748 FKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIII 785
              PP  PIRI+KNLR C+DCHTA  +ISKIV+REII+
Sbjct: 780 VMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIV 817


>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
          Length = 818

 Score =  742 bits (1916), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/796 (47%), Positives = 514/796 (64%), Gaps = 22/796 (2%)

Query: 26  RGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKK 85
           RG +A AA         T+  I  SV   +S + A  LQ CI   D +    +H  V+++
Sbjct: 29  RGFAAYAAALQWLEDELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRR 88

Query: 86  GNC--LDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVG 143
           G    LDLF  NVLLN+Y KL  L  A +LFD MPERN +SFVT +Q +     F  A  
Sbjct: 89  GGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAA 148

Query: 144 LFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFS 203
           LF  L  EGHE+N F  T  LK+ ++M  A L   V +C +KLGHD NAFVG+ LIDA+S
Sbjct: 149 LFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYS 208

Query: 204 VCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFK--PNNFTFAFVLKACLGLDTIRVA 261
           +C  V  A  VF+G+     ++A+ + + +        P N   AF       L  I  A
Sbjct: 209 LCSLVSDAEHVFNGIVR---KDAVVWTAMVSCYSENDCPEN---AFRCAQSCSLLAISCA 262

Query: 262 KSA-HGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQ 320
           +   HGCA+KT  + + +V  ALLD+Y K G+I +AR  FE +P  DVI  SFMI+RYAQ
Sbjct: 263 RQGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQ 322

Query: 321 TDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFV 380
           ++ +  A ELF R+ ++ V PN+++  SVLQAC  M  LD G QIH+  +++G  SD+FV
Sbjct: 323 SNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFV 382

Query: 381 SNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQV 440
            NALMD YAKC  M++S+++F+     N V+WNT++VG+ Q G   +A+ +F +M   Q+
Sbjct: 383 GNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQM 442

Query: 441 PATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARL 500
           P T+VTYSSVLRACAS A++    Q+HC   K+ ++ D V+ N+LID YAKCG I DA  
Sbjct: 443 PCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALK 502

Query: 501 VFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGL 560
           VF  + + + +SWNA+ISGY++HG +A+ L++FD M +     N++TFV +LS C + GL
Sbjct: 503 VFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCCSTGL 562

Query: 561 LEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
           +  G + F SM  ++GI+P +EHYT +V LLGRAG L+ A + I  IP  PS M+WRALL
Sbjct: 563 VNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALL 622

Query: 621 GACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SK 669
            +CIIH NV +GR SA+ IL+ EP+DE T+VLLSN+YA A S ++ A            K
Sbjct: 623 SSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRK 682

Query: 670 EPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDE 729
            PGLSW+E +G +H F  G   H DM +I  MLEWLN+K+ + GYIPD++ VL DV +++
Sbjct: 683 VPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQ 742

Query: 730 KERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVH 789
           K R LWVHSE+LALA+ L   PP  PIRI+KNLR C+DCHTA  +ISKIV+REII+RD++
Sbjct: 743 KTRMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDIN 802

Query: 790 RFHHFQDGCCSCGDFW 805
           RFHHF+DG CSCGD+W
Sbjct: 803 RFHHFEDGKCSCGDYW 818


>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
          Length = 744

 Score =  627 bits (1617), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 327/550 (59%), Positives = 394/550 (71%), Gaps = 32/550 (5%)

Query: 26  RGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKK 85
           RG S Q+A  TQ+           S SEFNSH+YA +LQ CIQ D+      +HC++LK+
Sbjct: 14  RGFSVQSAKLTQEFVGHV------SPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKR 67

Query: 86  GNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLF 145
           G CLDLFA N+LLN+YVK + L DA+KLFDEMPERNTISFVT IQGY  S +F+EA+ LF
Sbjct: 68  GGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELF 127

Query: 146 STLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVC 205
             LHREGHELNPF FT  LK+LVS    EL   + AC++KLGH+SNAFVGTALIDA+SVC
Sbjct: 128 VRLHREGHELNPFVFTTILKLLVSTDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVC 187

Query: 206 GCVEFARKVFDGLF----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVL 249
           G V+ AR+VFDG+                 NDCF+EAL  FSQMR VGFKPNNFTFA V 
Sbjct: 188 GRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVF 247

Query: 250 KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
           KACLGL+   V KS HGCALK+ YE+DLYV VALLDLYTKSG+I +ARR FEE+PKKDVI
Sbjct: 248 KACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARRAFEEIPKKDVI 307

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
           PWSFMIARYAQ+D S +AVE+F +MRQA V PNQFTF SVLQACATMEGL+LGNQIH  V
Sbjct: 308 PWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHV 367

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAM 429
           +++GL SDVFVSNALMDVYAKCGRMENS+ELFAESP RN VTWNT+IVG+VQLG+  KA+
Sbjct: 368 IKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKAL 427

Query: 430 IMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMY 489
            +F  MLE +V ATEVTYSS LRACASLAALEPG+Q+H LTVK     D +    ++   
Sbjct: 428 RLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKP----DKLTFVGVLSAC 483

Query: 490 AKCGSITDARLVFDMMNDWNEVSWNAMISGYS----MHGLSAEVLKVFDLMQQRGWRPNN 545
           A  G +   +  F  M   + +     I  Y+    + G    + K   L+ +  ++P+ 
Sbjct: 484 ANAGLLDQGQAYFTSMIQDHGIE--PCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSV 541

Query: 546 LTFVGVLSAC 555
           + +  +L AC
Sbjct: 542 MVWRALLGAC 551



 Score =  607 bits (1565), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 290/625 (46%), Positives = 410/625 (65%), Gaps = 42/625 (6%)

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
           F EA+  F ++   G + N F F  +LK  +  D   +    H C  K  +E + +V  A
Sbjct: 120 FLEAIELFVRLHREGHELNPFVFTTILKLLVSTDCGELGWGIHACIFKLGHESNAFVGTA 179

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+D Y+  G +  AR +F+ +  KD++ W+ M+  +A+ D   +A++LF +MR     PN
Sbjct: 180 LIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPN 239

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
            FTF SV +AC  +E  D+G  +H   ++     D++V  AL+D+Y K G ++++   F 
Sbjct: 240 NFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARRAFE 299

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
           E PK++ + W+ MI  Y Q  +  +A+ MF +M +  V   + T++SVL+ACA++  L  
Sbjct: 300 EIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNL 359

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G Q+HC  +K     DV V+NAL+D+YAKCG + ++  +F      N+V+WN +I G+  
Sbjct: 360 GNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQ 419

Query: 523 HGLSAEVLKVF-DLMQQR------------------------------GWRPNNLTFVGV 551
            G   + L++F ++++ R                                +P+ LTFVGV
Sbjct: 420 LGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKPDKLTFVGV 479

Query: 552 LSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQP 611
           LSAC+N GLL+QG+AYF SM+ ++GIEPCIEHYT MV LLGR GHLDKA KLI+ IPFQP
Sbjct: 480 LSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQP 539

Query: 612 SVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS--- 668
           SVM+WRALLGAC+IHN++E+GR+SAQ +L+ EP+D+ATHVLLSN+YA A+ W+  AS   
Sbjct: 540 SVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRK 599

Query: 669 --------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSA 720
                   KEPGLSWIE+QG VH F  GDTSH ++ +I GMLEWL+MK++KAGYIP+ + 
Sbjct: 600 NMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNV 659

Query: 721 VLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQ 780
           VL DV ++EKER LWVHSE+LAL+F + + P  SPIRI+KNLRICVDCH AIK ISK+VQ
Sbjct: 660 VLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQ 719

Query: 781 REIIIRDVHRFHHFQDGCCSCGDFW 805
           REI++RD++RFHHFQ+G CSCGD+W
Sbjct: 720 REIVVRDINRFHHFQEGLCSCGDYW 744



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/434 (28%), Positives = 221/434 (50%), Gaps = 9/434 (2%)

Query: 241 NNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIF 300
           N+  +A  L+ C+  D     K  H   LK    +DL+    LL++Y KS  + +A ++F
Sbjct: 37  NSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLF 96

Query: 301 EEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLD 360
           +EMP+++ I +  +I  YA++   ++A+ELF R+ +     N F F ++L+   + +  +
Sbjct: 97  DEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSTDCGE 156

Query: 361 LGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYV 420
           LG  IH+ + ++G  S+ FV  AL+D Y+ CGR++ + E+F     ++ V+W  M+  + 
Sbjct: 157 LGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFA 216

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV 480
           +     +A+ +FS+M          T++SV +AC  L A + G  VH   +K+ Y++D+ 
Sbjct: 217 ENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLY 276

Query: 481 VANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG 540
           V  AL+D+Y K G I DAR  F+ +   + + W+ MI+ Y+    S E +++F  M+Q  
Sbjct: 277 VGVALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQAL 336

Query: 541 WRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKA 600
             PN  TF  VL AC+    L  G       V   G+   +    +++ +  + G ++ +
Sbjct: 337 VLPNQFTFASVLQACATMEGLNLGNQ-IHCHVIKIGLHSDVFVSNALMDVYAKCGRMENS 395

Query: 601 AKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD-FEPEDEATHVLLSNIYAM 659
            +L    P +  V  W  ++   + H  +  G  + +  L+  E   +AT V  S   + 
Sbjct: 396 MELFAESPHRNDV-TWNTVI---VGHVQLGDGEKALRLFLNMLEYRVQATEVTYS---SA 448

Query: 660 ARSWEKAASKEPGL 673
            R+    A+ EPGL
Sbjct: 449 LRACASLAALEPGL 462


>gi|222625199|gb|EEE59331.1| hypothetical protein OsJ_11408 [Oryza sativa Japonica Group]
          Length = 691

 Score =  595 bits (1533), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 312/683 (45%), Positives = 424/683 (62%), Gaps = 29/683 (4%)

Query: 1   MIRLFN----YKTFSCKQLTHQSKINAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNS 56
           M+R  N      T SC    H+       RG +A AA         T+  I  SV   +S
Sbjct: 7   MLRPLNRGLLLPTLSCPVAPHR-------RGFAAYAAALQWLEDELTSLAILPSVPGVDS 59

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNC--LDLFATNVLLNVYVKLNRLPDATKLF 114
            + A  LQ CI   D +    +H  V+++G    LDLF  NVLLN+Y KL  L  A +LF
Sbjct: 60  FACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLF 119

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D MPERN +SFVT +Q +     F  A  LF  L  EGHE+N F  T  LK+ ++M  A 
Sbjct: 120 DRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAG 179

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
           L   V +C +KLGHD NAFVG+ LIDA+S+C  V  A  VF+G+                
Sbjct: 180 LAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYS 239

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            NDC E A   FS+MR  G KPN F    VLKA + L ++ + K  HGCA+KT  + + +
Sbjct: 240 ENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPH 299

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V  ALLD+Y K G+I +AR  FE +P  DVI  SFMI+RYAQ++ +  A ELF R+ ++ 
Sbjct: 300 VGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSS 359

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           V PN+++  SVLQAC  M  LD G QIH+  +++G  SD+FV NALMD YAKC  M++S+
Sbjct: 360 VLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSL 419

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
           ++F+     N V+WNT++VG+ Q G   +A+ +F +M   Q+P T+VTYSSVLRACAS A
Sbjct: 420 KIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTA 479

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           ++    Q+HC   K+ ++ D V+ N+LID YAKCG I DA  VF  + + + +SWNA+IS
Sbjct: 480 SIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIIS 539

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           GY++HG +A+ L++FD M +     N++TFV +LS CS+ GL+  G + F SM  ++GI+
Sbjct: 540 GYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIK 599

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P +EHYT +V LLGRAG L+ A + I  IP  PS M+WRALL +CIIH NV +GR SA+ 
Sbjct: 600 PSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEK 659

Query: 639 ILDFEPEDEATHVLLSNIYAMAR 661
           IL+ EP+DE T+VLLSN+YA AR
Sbjct: 660 ILEIEPQDETTYVLLSNMYAAAR 682


>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
          Length = 986

 Score =  590 bits (1521), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 303/778 (38%), Positives = 454/778 (58%), Gaps = 28/778 (3%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +  ++ + L +C    ++     ++  +LK G   DLF    L+N+++K   + DATK+F
Sbjct: 210 DKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVF 269

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D +P R+ +++ + I G     +F +A  LF  +  EG + +  AF + L+        E
Sbjct: 270 DNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALE 329

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
               V A + ++G D+  +VGTA++  ++ CG +E A +VFD +                
Sbjct: 330 QGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFA 389

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            +   +EA  FF++M   G +PN  TF  +L AC     ++  +      ++  Y  D  
Sbjct: 390 QHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDR 449

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V  ALL +Y K G + +A R+FE++ K++V+ W+ MI  Y Q +   +A+  F  + +  
Sbjct: 450 VRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEG 509

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           + PN  TF S+L  C + + L+LG  +H L+++ GL SD+ VSNAL+ ++  CG + ++ 
Sbjct: 510 IKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAK 569

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            LF + PKR+ V+WNT+I G+VQ G+   A   F  M E  +   ++T++ +L ACAS  
Sbjct: 570 NLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPE 629

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           AL  G ++H L  +A +D DV+V   LI MY KCGSI DA  VF  +   N  SW +MI+
Sbjct: 630 ALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIA 689

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           GY+ HG   E L++F  MQQ G +P+ +TFVG LSAC++ GL+E+G  +F+SM   + IE
Sbjct: 690 GYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM-KEFNIE 748

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P +EHY  MV L GRAG L++A + I  +  +P   +W ALLGAC +H NVE+   +AQ 
Sbjct: 749 PRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQK 808

Query: 639 ILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRA 687
            L+ +P D    V+LSNIYA A  W++ A            K+PG SWIE  G VH F +
Sbjct: 809 KLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYS 868

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFAL 747
            D +H     I   LE L+M+ R+ GY+PD   VL DV ++EKE+ L+ HSE+LA+ + L
Sbjct: 869 DDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHSERLAITYGL 928

Query: 748 FKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            K PP +PI I KNLR+C DCHTA K ISKI +R+II RD +RFHHF+DG CSCGDFW
Sbjct: 929 LKTPPLTPIVISKNLRVCGDCHTATKFISKITKRQIIARDSNRFHHFKDGVCSCGDFW 986



 Score =  305 bits (782), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 171/586 (29%), Positives = 303/586 (51%), Gaps = 18/586 (3%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
            +Y+  LQ CI+  +L     I+  + K G   D+F  N L+N+Y K      A ++FD+
Sbjct: 111 QTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDD 170

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
           M E++  S+   + GY     + EA  L   + ++  + +   F + L         +  
Sbjct: 171 MREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKG 230

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FN 220
             ++  + K G D++ FVGTALI+    CG +  A KVFD L                 +
Sbjct: 231 RELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARH 290

Query: 221 DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
             F++A N F +M   G +P+   F  +L+AC   + +   K  H    +  ++ ++YV 
Sbjct: 291 GRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVG 350

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
            A+L +YTK G + +A  +F+ +  ++V+ W+ MIA +AQ     +A   F +M ++ + 
Sbjct: 351 TAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIE 410

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           PN+ TF+S+L AC++   L  G QI   ++  G  SD  V  AL+ +YAKCG ++++  +
Sbjct: 411 PNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRV 470

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F +  K+N V WN MI  YVQ  +   A+  F  +L+E +     T++S+L  C S  +L
Sbjct: 471 FEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSL 530

Query: 461 EPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY 520
           E G  VH L +KA  + D+ V+NAL+ M+  CG +  A+ +F+ M   + VSWN +I+G+
Sbjct: 531 ELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGF 590

Query: 521 SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPC 580
             HG +      F +MQ+ G +P+ +TF G+L+AC++   L +G     +++     +  
Sbjct: 591 VQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRR-LHALITEAAFDCD 649

Query: 581 IEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH 626
           +   T ++S+  + G ++ A ++   +P + +V  W +++     H
Sbjct: 650 VLVGTGLISMYTKCGSIEDAHQVFHKLP-KKNVYSWTSMIAGYAQH 694



 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 149/513 (29%), Positives = 266/513 (51%), Gaps = 18/513 (3%)

Query: 135 SSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFV 194
           + QF EA+ +   +     ++    ++A L++ +          ++  + K G   + F+
Sbjct: 88  AGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFM 147

Query: 195 GTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRAVGF 238
              LI+ ++ CG    A+++FD +                 +  +EEA     QM     
Sbjct: 148 RNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSV 207

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
           KP+  TF  +L AC     +   +  +   LK  ++ DL+V  AL++++ K G+I +A +
Sbjct: 208 KPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATK 267

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           +F+ +P +D++ W+ MI   A+      A  LF RM +  V P++  FVS+L+AC   E 
Sbjct: 268 VFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEA 327

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           L+ G ++H+ +  VG  ++++V  A++ +Y KCG ME+++E+F     RN V+W  MI G
Sbjct: 328 LEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAG 387

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           + Q G + +A + F+KM+E  +    VT+ S+L AC+S +AL+ G Q+    ++A Y  D
Sbjct: 388 FAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSD 447

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
             V  AL+ MYAKCGS+ DA  VF+ ++  N V+WNAMI+ Y  H      L  F  + +
Sbjct: 448 DRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLK 507

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLD 598
            G +PN+ TF  +L+ C +   LE G+ +   ++   G+E  +    ++VS+    G L 
Sbjct: 508 EGIKPNSSTFTSILNVCKSSDSLELGK-WVHFLIMKAGLESDLHVSNALVSMFVNCGDLM 566

Query: 599 KAAKLIEGIPFQPSVMIWRALLGACIIHNNVEI 631
            A  L   +P +  ++ W  ++   + H   ++
Sbjct: 567 SAKNLFNDMP-KRDLVSWNTIIAGFVQHGKNQV 598



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 210/397 (52%), Gaps = 38/397 (9%)

Query: 306 KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
           KD    + ++ R ++     +A+++  R+  + +   + T+ ++LQ C   + L  G +I
Sbjct: 73  KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERI 132

Query: 366 HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEV 425
           ++ + + G+  D+F+ N L+++YAKCG   ++ ++F +  +++  +WN ++ GYVQ G  
Sbjct: 133 YNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLY 192

Query: 426 GKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANAL 485
            +A  +  +M+++ V   + T+ S+L ACA    ++ G +++ L +KA +D D+ V  AL
Sbjct: 193 EEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTAL 252

Query: 486 IDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNN 545
           I+M+ KCG I DA  VFD +   + V+W +MI+G + HG   +   +F  M++ G +P+ 
Sbjct: 253 INMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDK 312

Query: 546 LTFVGVLSACSNGGLLEQG--------------EAYFK----SMVANYG-IEPCIE---- 582
           + FV +L AC++   LEQG              E Y      SM    G +E  +E    
Sbjct: 313 VAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDL 372

Query: 583 -------HYTSMVSLLGRAGHLDKA----AKLIEGIPFQPSVMIWRALLGACIIHNNVEI 631
                   +T+M++   + G +D+A     K+IE    +P+ + + ++LGAC   + ++ 
Sbjct: 373 VKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIES-GIEPNRVTFMSILGACSSPSALKR 431

Query: 632 GRLSAQHILD--FEPEDEATHVLLSNIYAMARSWEKA 666
           G+    HI++  +  +D     LLS +YA   S + A
Sbjct: 432 GQQIQDHIIEAGYGSDDRVRTALLS-MYAKCGSLKDA 467



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 173/364 (47%), Gaps = 16/364 (4%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N  ++ + L +C     L+    I   +++ G   D      LL++Y K   L DA +
Sbjct: 410 EPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHR 469

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +F+++ ++N +++   I  Y    Q+  A+  F  L +EG + N   FT+ L V  S   
Sbjct: 470 VFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDS 529

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF-- 223
            EL   V   + K G +S+  V  AL+  F  CG +  A+ +F+ +       +N     
Sbjct: 530 LELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAG 589

Query: 224 -------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
                  + A ++F  M+  G KP+  TF  +L AC   + +   +  H    +  ++ D
Sbjct: 590 FVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCD 649

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           + V   L+ +YTK G I +A ++F ++PKK+V  W+ MIA YAQ     +A+ELF +M+Q
Sbjct: 650 VLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQ 709

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             V P+  TFV  L ACA    ++ G      +    +   +     ++D++ + G +  
Sbjct: 710 EGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKEFNIEPRMEHYGCMVDLFGRAGLLNE 769

Query: 397 SVEL 400
           +VE 
Sbjct: 770 AVEF 773


>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 986

 Score =  590 bits (1521), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 303/778 (38%), Positives = 454/778 (58%), Gaps = 28/778 (3%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +  ++ + L +C    ++     ++  +LK G   DLF    L+N+++K   + DATK+F
Sbjct: 210 DKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVF 269

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D +P R+ +++ + I G     +F +A  LF  +  EG + +  AF + L+        E
Sbjct: 270 DNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALE 329

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
               V A + ++G D+  +VGTA++  ++ CG +E A +VFD +                
Sbjct: 330 QGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFA 389

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            +   +EA  FF++M   G +PN  TF  +L AC     ++  +      ++  Y  D  
Sbjct: 390 QHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDR 449

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V  ALL +Y K G + +A R+FE++ K++V+ W+ MI  Y Q +   +A+  F  + +  
Sbjct: 450 VRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEG 509

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           + PN  TF S+L  C + + L+LG  +H L+++ GL SD+ VSNAL+ ++  CG + ++ 
Sbjct: 510 IKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAK 569

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            LF + PKR+ V+WNT+I G+VQ G+   A   F  M E  +   ++T++ +L ACAS  
Sbjct: 570 NLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPE 629

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           AL  G ++H L  +A +D DV+V   LI MY KCGSI DA  VF  +   N  SW +MI+
Sbjct: 630 ALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIT 689

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           GY+ HG   E L++F  MQQ G +P+ +TFVG LSAC++ GL+E+G  +F+SM   + IE
Sbjct: 690 GYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM-KEFNIE 748

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P +EHY  MV L GRAG L++A + I  +  +P   +W ALLGAC +H NVE+   +AQ 
Sbjct: 749 PRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQK 808

Query: 639 ILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRA 687
            L+ +P D    V+LSNIYA A  W++ A            K+PG SWIE  G VH F +
Sbjct: 809 KLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYS 868

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFAL 747
            D +H     I   LE L+M+ R+ GY+PD   VL DV ++EKE+ L+ HSE+LA+ + L
Sbjct: 869 DDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHSERLAITYGL 928

Query: 748 FKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            K PP +PI I KNLR+C DCHTA K ISKI +R+II RD +RFHHF+DG CSCGDFW
Sbjct: 929 LKTPPLTPIVISKNLRVCGDCHTATKFISKITKRQIIARDSNRFHHFKDGVCSCGDFW 986



 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 171/586 (29%), Positives = 303/586 (51%), Gaps = 18/586 (3%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
            +Y+  LQ CI+  +L     I+  + K G   D+F  N L+N+Y K      A ++FD+
Sbjct: 111 QTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDD 170

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
           M E++  S+   + GY     + EA  L   + ++  + +   F + L         +  
Sbjct: 171 MREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKG 230

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FN 220
             ++  + K G D++ FVGTALI+    CG +  A KVFD L                 +
Sbjct: 231 RELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARH 290

Query: 221 DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
             F++A N F +M   G +P+   F  +L+AC   + +   K  H    +  ++ ++YV 
Sbjct: 291 GRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVG 350

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
            A+L +YTK G + +A  +F+ +  ++V+ W+ MIA +AQ     +A   F +M ++ + 
Sbjct: 351 TAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIE 410

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           PN+ TF+S+L AC++   L  G QI   ++  G  SD  V  AL+ +YAKCG ++++  +
Sbjct: 411 PNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRV 470

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F +  K+N V WN MI  YVQ  +   A+  F  +L+E +     T++S+L  C S  +L
Sbjct: 471 FEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSL 530

Query: 461 EPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY 520
           E G  VH L +KA  + D+ V+NAL+ M+  CG +  A+ +F+ M   + VSWN +I+G+
Sbjct: 531 ELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGF 590

Query: 521 SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPC 580
             HG +      F +MQ+ G +P+ +TF G+L+AC++   L +G     +++     +  
Sbjct: 591 VQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRR-LHALITEAAFDCD 649

Query: 581 IEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH 626
           +   T ++S+  + G ++ A ++   +P + +V  W +++     H
Sbjct: 650 VLVGTGLISMYTKCGSIEDAHQVFHKLP-KKNVYSWTSMITGYAQH 694



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 149/513 (29%), Positives = 266/513 (51%), Gaps = 18/513 (3%)

Query: 135 SSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFV 194
           + QF EA+ +   +     ++    ++A L++ +          ++  + K G   + F+
Sbjct: 88  AGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFM 147

Query: 195 GTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRAVGF 238
              LI+ ++ CG    A+++FD +                 +  +EEA     QM     
Sbjct: 148 WNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSV 207

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
           KP+  TF  +L AC     +   +  +   LK  ++ DL+V  AL++++ K G+I +A +
Sbjct: 208 KPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATK 267

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           +F+ +P +D++ W+ MI   A+      A  LF RM +  V P++  FVS+L+AC   E 
Sbjct: 268 VFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEA 327

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           L+ G ++H+ +  VG  ++++V  A++ +Y KCG ME+++E+F     RN V+W  MI G
Sbjct: 328 LEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAG 387

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           + Q G + +A + F+KM+E  +    VT+ S+L AC+S +AL+ G Q+    ++A Y  D
Sbjct: 388 FAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSD 447

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
             V  AL+ MYAKCGS+ DA  VF+ ++  N V+WNAMI+ Y  H      L  F  + +
Sbjct: 448 DRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLK 507

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLD 598
            G +PN+ TF  +L+ C +   LE G+ +   ++   G+E  +    ++VS+    G L 
Sbjct: 508 EGIKPNSSTFTSILNVCKSSDSLELGK-WVHFLIMKAGLESDLHVSNALVSMFVNCGDLM 566

Query: 599 KAAKLIEGIPFQPSVMIWRALLGACIIHNNVEI 631
            A  L   +P +  ++ W  ++   + H   ++
Sbjct: 567 SAKNLFNDMP-KRDLVSWNTIIAGFVQHGKNQV 598



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 210/397 (52%), Gaps = 38/397 (9%)

Query: 306 KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
           KD    + ++ R ++     +A+++  R+  + +   + T+ ++LQ C   + L  G +I
Sbjct: 73  KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERI 132

Query: 366 HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEV 425
           ++ + + G+  D+F+ N L+++YAKCG   ++ ++F +  +++  +WN ++ GYVQ G  
Sbjct: 133 YNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLY 192

Query: 426 GKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANAL 485
            +A  +  +M+++ V   + T+ S+L ACA    ++ G +++ L +KA +D D+ V  AL
Sbjct: 193 EEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTAL 252

Query: 486 IDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNN 545
           I+M+ KCG I DA  VFD +   + V+W +MI+G + HG   +   +F  M++ G +P+ 
Sbjct: 253 INMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDK 312

Query: 546 LTFVGVLSACSNGGLLEQG--------------EAYFK----SMVANYG-IEPCIE---- 582
           + FV +L AC++   LEQG              E Y      SM    G +E  +E    
Sbjct: 313 VAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDL 372

Query: 583 -------HYTSMVSLLGRAGHLDKA----AKLIEGIPFQPSVMIWRALLGACIIHNNVEI 631
                   +T+M++   + G +D+A     K+IE    +P+ + + ++LGAC   + ++ 
Sbjct: 373 VKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIES-GIEPNRVTFMSILGACSSPSALKR 431

Query: 632 GRLSAQHILD--FEPEDEATHVLLSNIYAMARSWEKA 666
           G+    HI++  +  +D     LLS +YA   S + A
Sbjct: 432 GQQIQDHIIEAGYGSDDRVRTALLS-MYAKCGSLKDA 467



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 172/364 (47%), Gaps = 16/364 (4%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N  ++ + L +C     L+    I   +++ G   D      LL++Y K   L DA +
Sbjct: 410 EPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHR 469

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +F+++ ++N +++   I  Y    Q+  A+  F  L +EG + N   FT+ L V  S   
Sbjct: 470 VFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDS 529

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF-- 223
            EL   V   + K G +S+  V  AL+  F  CG +  A+ +F+ +       +N     
Sbjct: 530 LELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAG 589

Query: 224 -------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
                  + A ++F  M+  G KP+  TF  +L AC   + +   +  H    +  ++ D
Sbjct: 590 FVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCD 649

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           + V   L+ +YTK G I +A ++F ++PKK+V  W+ MI  YAQ     +A+ELF +M+Q
Sbjct: 650 VLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQ 709

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             V P+  TFV  L ACA    ++ G      +    +   +     ++D++ + G +  
Sbjct: 710 EGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKEFNIEPRMEHYGCMVDLFGRAGLLNE 769

Query: 397 SVEL 400
           +VE 
Sbjct: 770 AVEF 773


>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
          Length = 820

 Score =  589 bits (1518), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 309/781 (39%), Positives = 448/781 (57%), Gaps = 27/781 (3%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           S+ +S+ Y   LQSC++  DL     +H  +L+ G   +++  N LL +YV    + +A 
Sbjct: 40  SQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEAR 99

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
           +LFD+   ++ +S+   I GY       EA  LF+ + +EG E + F F + L    S  
Sbjct: 100 RLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPA 159

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN----------- 220
                  V   V + G  +NA VG ALI  ++ CG V  AR+VFD + +           
Sbjct: 160 ALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTG 219

Query: 221 -----DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
                   +E+L  +  M   G +P+  T+  VL AC  L  +   K  H   +++ +  
Sbjct: 220 AYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHS 279

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
           D+ V+ AL  +Y K G + +AR +FE +P +DVI W+ MI     +    +A  +F RM 
Sbjct: 280 DVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRML 339

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
           +  VAP++ T++++L ACA   GL  G +IH+  V+ GL+SDV   NAL+++Y+K G M+
Sbjct: 340 KECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMK 399

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
           ++ ++F   PKR+ V+W  ++ GY   G+V ++   F KML++ V A ++TY  VL+AC+
Sbjct: 400 DARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACS 459

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
           +  AL+ G ++H   VKA    D+ VANAL+ MY KCGS+ DA  V + M+  + V+WN 
Sbjct: 460 NPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNT 519

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           +I G + +G   E L+ F++M+    RPN  TFV V+SAC    L+E+G   F SM  +Y
Sbjct: 520 LIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDY 579

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS 635
           GI P  +HY  MV +L RAGHL +A  +I  +PF+PS  +W ALL AC  H NVEIG  +
Sbjct: 580 GIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQA 639

Query: 636 AQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHY 684
           A+  L  EP++  T+V LS IYA A  W           E+   KEPG SWIE  G VH 
Sbjct: 640 AEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHS 699

Query: 685 FRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALA 744
           F AGD SH     I   LE L  + +  GY+PD   V+ D+ ++ KER +  HSEKLA+A
Sbjct: 700 FVAGDQSHPRTEEIYSELEALTKQIKSLGYVPDTRFVMHDLDQEGKERAVCHHSEKLAIA 759

Query: 745 FALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
           + L   PP +PIR+ KNLR+C DCHTA K ISKI  REII RD HRFHHF++G CSCGD+
Sbjct: 760 YGLISTPPETPIRVSKNLRVCTDCHTATKFISKITGREIIARDAHRFHHFKNGECSCGDY 819

Query: 805 W 805
           W
Sbjct: 820 W 820



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 125/386 (32%), Positives = 219/386 (56%), Gaps = 2/386 (0%)

Query: 237 GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNA 296
           G + +++ +  +L++C+    + V K  H   L+   + ++Y+   LL LY   G ++ A
Sbjct: 39  GSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEA 98

Query: 297 RRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM 356
           RR+F++   K V+ W+ MI+ YA   L  +A  LF  M+Q  + P++FTFVS+L AC++ 
Sbjct: 99  RRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSP 158

Query: 357 EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMI 416
             L+ G ++H  V+  GL ++  V NAL+ +YAKCG + ++  +F     R+ V+W T+ 
Sbjct: 159 AALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLT 218

Query: 417 VGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD 476
             Y + G   +++  +  ML+E V  + +TY +VL AC SLAALE G Q+H   V++ + 
Sbjct: 219 GAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHH 278

Query: 477 MDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLM 536
            DV V+ AL  MY KCG++ DAR VF+ + + + ++WN MI G    G   E   +F  M
Sbjct: 279 SDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRM 338

Query: 537 QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGH 596
            +    P+ +T++ +LSAC+  G L  G+      V + G+   +    +++++  +AG 
Sbjct: 339 LKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKD-GLVSDVRFGNALINMYSKAGS 397

Query: 597 LDKAAKLIEGIPFQPSVMIWRALLGA 622
           +  A ++ + +P +  V+ W AL+G 
Sbjct: 398 MKDARQVFDRMP-KRDVVSWTALVGG 422


>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
          Length = 1020

 Score =  584 bits (1506), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 299/770 (38%), Positives = 444/770 (57%), Gaps = 27/770 (3%)

Query: 63   LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
            L SC     L+    IH + +K     D+   N +LN+Y K   + +A ++FD+M  ++ 
Sbjct: 251  LSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSV 310

Query: 123  ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
            +S+   I GY        A  +F  + +EG   N   +   L         +    V + 
Sbjct: 311  VSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSH 370

Query: 183  VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN----------------DCFEEA 226
            +   GH+S+  VGTAL+  ++ CG  +  R+VF+ L N                  +EEA
Sbjct: 371  ILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEA 430

Query: 227  LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
               + QM+  G  PN  T+  +L AC+    +   +  H   +K  +  D+ V  AL+ +
Sbjct: 431  SEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISM 490

Query: 287  YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
            Y + G I +AR +F +M +KD+I W+ MI   A++ L  +A+ +F  M+QA + PN+ T+
Sbjct: 491  YARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTY 550

Query: 347  VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
             S+L AC++   LD G +IH  V+  GL +D  V+N L+++Y+ CG ++++ ++F    +
Sbjct: 551  TSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQ 610

Query: 407  RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
            R+ V +N MI GY       +A+ +F ++ EE +   +VTY ++L ACA+  +LE   ++
Sbjct: 611  RDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEI 670

Query: 467  HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLS 526
            H L +K  Y  D  + NAL+  YAKCGS +DA LVFD M   N +SWNA+I G + HG  
Sbjct: 671  HSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRG 730

Query: 527  AEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTS 586
             +VL++F+ M+  G +P+ +TFV +LSACS+ GLLE+G  YF SM  ++GI P IEHY  
Sbjct: 731  QDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGC 790

Query: 587  MVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPED 646
            MV LLGRAG LD+   LI+ +PFQ +  IW ALLGAC IH NV +   +A+  L  +P++
Sbjct: 791  MVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDPDN 850

Query: 647  EATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADM 695
             A +V LS++YA A  W+ AA           +KEPG SWIE    +HYF A D SH + 
Sbjct: 851  AAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPES 910

Query: 696  NIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSP 755
              I   L+ L    +  GY+PD  +V+ DV E EKE  +  HSE+LA+A+ L    P +P
Sbjct: 911  EKIYAELDKLTHAMKMEGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTLPGTP 970

Query: 756  IRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            IRI KNLR+C DCHTA K I+KIV REI+ RDV+RFHHF+DG CSCGD+W
Sbjct: 971  IRIFKNLRVCPDCHTATKFITKIVDREIVARDVNRFHHFKDGVCSCGDYW 1020



 Score =  310 bits (793), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 184/598 (30%), Positives = 312/598 (52%), Gaps = 30/598 (5%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           +  NS  Y   L+ CI+  DL     +H  +++    LD +  N L+N+Y++   + +A 
Sbjct: 137 ARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEAR 196

Query: 112 KLFDEM--PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           ++++++   ER   S+   + GY       EA+ L   + + G  L        +++L S
Sbjct: 197 QVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGR---ATTMRLLSS 253

Query: 170 MGWAELCPC-----VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-------- 216
                   C     V A   +L  D N  V   +++ ++ CG +  AR+VFD        
Sbjct: 254 CKSPSALECGREIHVEAMKARLLFDVN--VANCILNMYAKCGSIHEAREVFDKMETKSVV 311

Query: 217 ------GLFNDC--FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCA 268
                 G + DC   E A   F +M+  G  PN  T+  VL A  G   ++  K+ H   
Sbjct: 312 SWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHI 371

Query: 269 LKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAV 328
           L   +E DL V  AL+ +Y K G   + R++FE++  +D+I W+ MI   A+     +A 
Sbjct: 372 LNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEAS 431

Query: 329 ELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVY 388
           E++ +M++  + PN+ T+V +L AC     L  G +IHS VV+ G + D+ V NAL+ +Y
Sbjct: 432 EIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMY 491

Query: 389 AKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYS 448
           A+CG ++++  LF +  +++ ++W  MI G  + G   +A+ +F  M +  +    VTY+
Sbjct: 492 ARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYT 551

Query: 449 SVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDW 508
           S+L AC+S AAL+ G ++H   ++A    D  VAN L++MY+ CGS+ DAR VFD M   
Sbjct: 552 SILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQR 611

Query: 509 NEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYF 568
           + V++NAMI GY+ H L  E LK+FD +Q+ G +P+ +T++ +L+AC+N G LE  +   
Sbjct: 612 DIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKE-I 670

Query: 569 KSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH 626
            S+V   G         ++VS   + G    A  + + +  + +V+ W A++G C  H
Sbjct: 671 HSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKM-MKRNVISWNAIIGGCAQH 727



 Score =  249 bits (635), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 145/455 (31%), Positives = 237/455 (52%), Gaps = 20/455 (4%)

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFDGLFN------------------DCFEEALNFFSQ 232
           + +   ALI+ +  CG +E AR+V++ L +                     EEAL    +
Sbjct: 175 DQYTVNALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLRE 234

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           M+  G      T   +L +C     +   +  H  A+K     D+ VA  +L++Y K G 
Sbjct: 235 MQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGS 294

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           I  AR +F++M  K V+ W+ +I  YA    S  A E+F +M+Q  V PN+ T+++VL A
Sbjct: 295 IHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNA 354

Query: 353 CATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTW 412
            +    L  G  +HS ++  G  SD+ V  AL+ +YAKCG  ++  ++F +   R+ + W
Sbjct: 355 FSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAW 414

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
           NTMI G  + G   +A  ++ +M  E +   ++TY  +L AC +  AL  G ++H   VK
Sbjct: 415 NTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVK 474

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
             +  D+ V NALI MYA+CGSI DARL+F+ M   + +SW AMI G +  GL AE L V
Sbjct: 475 DGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAV 534

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
           F  MQQ G +PN +T+  +L+ACS+   L+ G    + ++   G+        ++V++  
Sbjct: 535 FQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVI-EAGLATDAHVANTLVNMYS 593

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
             G +  A ++ + +  Q  ++ + A++G    HN
Sbjct: 594 MCGSVKDARQVFDRMT-QRDIVAYNAMIGGYAAHN 627



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 119/401 (29%), Positives = 213/401 (53%), Gaps = 4/401 (0%)

Query: 224 EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
           + A++    ++  G + N+  +  +LK C+ +  +   +  H   ++ C  +D Y   AL
Sbjct: 123 DRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNAL 182

Query: 284 LDLYTKSGEISNARRIFEEM--PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           +++Y + G I  AR+++ ++   ++ V  W+ M+  Y Q     +A++L   M+Q  +A 
Sbjct: 183 INMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLAL 242

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
            + T + +L +C +   L+ G +IH   ++  LL DV V+N ++++YAKCG +  + E+F
Sbjct: 243 GRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVF 302

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
            +   ++ V+W  +I GY   G    A  +F KM +E V    +TY +VL A +  AAL+
Sbjct: 303 DKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALK 362

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
            G  VH   + A ++ D+ V  AL+ MYAKCGS  D R VF+ + + + ++WN MI G +
Sbjct: 363 WGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLA 422

Query: 522 MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
             G   E  +++  MQ+ G  PN +T+V +L+AC N   L  G     S V   G    I
Sbjct: 423 EGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGRE-IHSRVVKDGFMFDI 481

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
               +++S+  R G + K A+L+     +  ++ W A++G 
Sbjct: 482 SVQNALISMYARCGSI-KDARLLFNKMVRKDIISWTAMIGG 521



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 181/380 (47%), Gaps = 18/380 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +Y   L +C+    L     IH +V+K G   D+   N L+++Y +   + DA  LF
Sbjct: 445 NKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLF 504

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           ++M  ++ IS+   I G   S    EA+ +F  + + G + N   +T+ L    S    +
Sbjct: 505 NKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALD 564

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
               +   V + G  ++A V   L++ +S+CG V+ AR+VFD +                
Sbjct: 565 WGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYA 624

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            ++  +EAL  F +++  G KP+  T+  +L AC    ++  AK  H   LK  Y  D  
Sbjct: 625 AHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTS 684

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           +  AL+  Y K G  S+A  +F++M K++VI W+ +I   AQ     D ++LF RM+   
Sbjct: 685 LGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEG 744

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR-VGLLSDVFVSNALMDVYAKCGRMENS 397
           + P+  TFVS+L AC+    L+ G +    + R  G+   +     ++D+  + G+++  
Sbjct: 745 IKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEV 804

Query: 398 VELFAESP-KRNHVTWNTMI 416
             L    P + N   W  ++
Sbjct: 805 EALIKTMPFQANTRIWGALL 824



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 82/385 (21%), Positives = 156/385 (40%), Gaps = 51/385 (13%)

Query: 27  GLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKG 86
           GL A+A    Q    +   P        N  +Y + L +C     L     IH QV++ G
Sbjct: 526 GLGAEALAVFQDMQQAGLKP--------NRVTYTSILNACSSPAALDWGRRIHQQVIEAG 577

Query: 87  NCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFS 146
              D    N L+N+Y     + DA ++FD M +R+ +++   I GY   +   EA+ LF 
Sbjct: 578 LATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFD 637

Query: 147 TLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCG 206
            L  EG + +   +   L    + G  E    + + V K G+ S+  +G AL+  ++ CG
Sbjct: 638 RLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCG 697

Query: 207 CVEFARKVFD-----------GLFNDCF-----EEALNFFSQMRAVGFKPNNFTFAFVLK 250
               A  VFD            +   C      ++ L  F +M+  G KP+  TF  +L 
Sbjct: 698 SFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLS 757

Query: 251 ACLGLDTIRVAKSAHGCALKTCYEMDLYVA--VALLDLYTKSGEISNARRIFEEMP-KKD 307
           AC     +   +  + C++   + +   +     ++DL  ++G++     + + MP + +
Sbjct: 758 ACSHAGLLEEGRR-YFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQAN 816

Query: 308 VIPWSFMIA------------RYAQTDLSIDA--VELFCRMRQAFVAPNQFTFVSVLQAC 353
              W  ++             R A++ L +D     ++  +   + A   +   + L+  
Sbjct: 817 TRIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKL 876

Query: 354 ATMEG---------LDLGNQIHSLV 369
               G         +++G+++H  V
Sbjct: 877 MEQRGVTKEPGRSWIEVGDKLHYFV 901


>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
          Length = 980

 Score =  581 bits (1497), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 304/778 (39%), Positives = 449/778 (57%), Gaps = 28/778 (3%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           + +++   L +C    ++     +   +L  G   DLF    L+N+++K   + DA K+F
Sbjct: 204 DKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVF 263

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           + +P R+ I++ + I G     QF +A  LF  +  EG + +  AF + LK        E
Sbjct: 264 NNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALE 323

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
               V A + ++G D+  +VGTAL+  ++ CG +E A +VF+ +                
Sbjct: 324 QGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFA 383

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            +   EEA  FF++M   G +PN  TF  +L AC     ++  +  H   +K  Y  D  
Sbjct: 384 QHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDR 443

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V  ALL +Y K G + +AR +FE + K++V+ W+ MI  Y Q +   +AV  F  + +  
Sbjct: 444 VRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEG 503

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           + P+  TF S+L  C + + L+LG  + SL++R G  SD+ + NAL+ ++  CG + +++
Sbjct: 504 IKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAM 563

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            LF + P+R+ V+WNT+I G+VQ GE   A   F  M E  V   ++T++ +L ACAS  
Sbjct: 564 NLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPE 623

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           AL  G ++H L  +A  D DVVV   LI MY KCGSI DA LVF  +   N  SW +MI+
Sbjct: 624 ALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMIT 683

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           GY+ HG   E L++F  MQQ G +P+ +TFVG LSAC++ GL+++G  +F+SM  ++ IE
Sbjct: 684 GYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESM-KDFNIE 742

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P +EHY  MV L GRAG L +A + I  +  +P   +W ALLGAC +H +VE+    AQ 
Sbjct: 743 PRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQK 802

Query: 639 ILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRA 687
            L+ +P D+  +V+LSNIYA A  W           ++   K+PG SWIE  G VH F +
Sbjct: 803 KLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCS 862

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFAL 747
            D +H  +  I   L  L+M+ +K GY+PD   VL DV + EKE  L  HSE+LA+A+ L
Sbjct: 863 DDKTHPQIEEIHAELGRLHMEMKKLGYVPDTRYVLHDVEDSEKEHALCHHSERLAIAYGL 922

Query: 748 FKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            K PP +PI I KNLR+C DCHTA K+ISKI +R+II RD +RFHHF+DG CSCGDFW
Sbjct: 923 LKTPPLTPIVISKNLRVCGDCHTATKLISKITKRQIIARDSNRFHHFKDGVCSCGDFW 980



 Score =  309 bits (791), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 181/632 (28%), Positives = 320/632 (50%), Gaps = 29/632 (4%)

Query: 15  LTHQSKINAWLRGLSAQAALSTQQCSNSTTTPITFSVS----EFNSHSYATSLQSCIQND 70
           + +  + NA+L  LS    LS           +  SV     + +  +Y++ LQ CI++ 
Sbjct: 66  IKNTQRANAFLNRLSKAGQLSEAML-------VLLSVDSPHIQIHRQTYSSLLQLCIKHK 118

Query: 71  DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQ 130
           +L     IH  +       D+F  N+L+++Y K      A ++FDEMP+++  S+   + 
Sbjct: 119 NLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLG 178

Query: 131 GYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDS 190
           GY    ++ EA  L   + ++G + + + F   L         +    +F+ +   G D+
Sbjct: 179 GYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDT 238

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMR 234
           + FVGTALI+    CG V+ A KVF+ L                 +  F++A N F  M 
Sbjct: 239 DLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVME 298

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
             G +P+   F  +LKAC   + +   K  H    +   + ++YV  ALL +YTK G + 
Sbjct: 299 EEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSME 358

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
           +A  +F  +  ++V+ W+ MIA +AQ     +A   F +M ++ + PN+ TF+S+L AC+
Sbjct: 359 DALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACS 418

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
               L  G QIH  +++ G ++D  V  AL+ +YAKCG + ++  +F    K+N V WN 
Sbjct: 419 RPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNA 478

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
           MI  YVQ  +   A+  F  +L+E +     T++S+L  C S  ALE G  V  L ++A 
Sbjct: 479 MITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAG 538

Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
           ++ D+ + NAL+ M+  CG +  A  +F+ M + + VSWN +I+G+  HG +      F 
Sbjct: 539 FESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFK 598

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
           +MQ+ G +P+ +TF G+L+AC++   L +G     +++    ++  +   T ++S+  + 
Sbjct: 599 MMQESGVKPDQITFTGLLNACASPEALTEGRR-LHALITEAALDCDVVVGTGLISMYTKC 657

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIH 626
           G +D A  +   +P + +V  W +++     H
Sbjct: 658 GSIDDAHLVFHNLP-KKNVYSWTSMITGYAQH 688



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 128/398 (32%), Positives = 223/398 (56%), Gaps = 4/398 (1%)

Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
           T++ +L+ C+    +   +  H     +  + D+++   L+ +Y K G  ++A++IF+EM
Sbjct: 106 TYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEM 165

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
           P KDV  W+ ++  Y Q     +A  L  +M Q  V P+++TFV +L ACA  + +D G 
Sbjct: 166 PDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGG 225

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
           ++ SL++  G  +D+FV  AL++++ KCG +++++++F   P+R+ +TW +MI G  +  
Sbjct: 226 ELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHR 285

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN 483
           +  +A  +F  M EE V   +V + S+L+AC    ALE G +VH    +   D ++ V  
Sbjct: 286 QFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGT 345

Query: 484 ALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRP 543
           AL+ MY KCGS+ DA  VF+++   N VSW AMI+G++ HG   E    F+ M + G  P
Sbjct: 346 ALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEP 405

Query: 544 NNLTFVGVLSACSNGGLLEQGEAYFKSMV-ANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           N +TF+ +L ACS    L+QG      ++ A Y  +  +   T+++S+  + G L  A  
Sbjct: 406 NRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVR--TALLSMYAKCGSLMDARN 463

Query: 603 LIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHIL 640
           + E I  Q +V+ W A++ A + H   +    + Q +L
Sbjct: 464 VFERISKQ-NVVAWNAMITAYVQHEKYDNAVATFQALL 500



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 173/379 (45%), Gaps = 46/379 (12%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N  ++ + L +C +   L+    IH +++K G   D      LL++Y K   L DA  
Sbjct: 404 EPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARN 463

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +F+ + ++N +++   I  Y    ++  AV  F  L +EG + +   FT+ L V  S   
Sbjct: 464 VFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDA 523

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEE------- 225
            EL   V + + + G +S+  +  AL+  F  CG +  A      LFND  E        
Sbjct: 524 LELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMN----LFNDMPERDLVSWNT 579

Query: 226 -------------ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC 272
                        A ++F  M+  G KP+  TF  +L AC   + +   +  H    +  
Sbjct: 580 IIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAA 639

Query: 273 YEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFC 332
            + D+ V   L+ +YTK G I +A  +F  +PKK+V  W+ MI  YAQ     +A+ELFC
Sbjct: 640 LDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFC 699

Query: 333 RMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL-----LSDVFVS------ 381
           +M+Q  V P+  TFV  L ACA           H+ +++ GL     + D  +       
Sbjct: 700 QMQQEGVKPDWITFVGALSACA-----------HAGLIKEGLHHFESMKDFNIEPRMEHY 748

Query: 382 NALMDVYAKCGRMENSVEL 400
             ++D++ + G +  +VE 
Sbjct: 749 GCMVDLFGRAGLLHEAVEF 767


>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 902

 Score =  581 bits (1497), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 298/770 (38%), Positives = 444/770 (57%), Gaps = 27/770 (3%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L SC     L+    IH Q ++ G   D+   N +LN+Y K   + +A ++FD+M +++ 
Sbjct: 133 LSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSV 192

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +S+  TI GY    +   A  +F  + +EG   N   + + L    S    +    V + 
Sbjct: 193 VSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSR 252

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN----------------DCFEEA 226
           +   GH+S+  VGTAL+  ++ CG  +  R+VF+ L N                  +EEA
Sbjct: 253 ILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEA 312

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
              ++QM+  G  PN  T+  +L AC+    +   K  H    K  +  D+ V  AL+ +
Sbjct: 313 SEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISM 372

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y++ G I +AR +F++M +KDVI W+ MI   A++    +A+ ++  M+QA V PN+ T+
Sbjct: 373 YSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTY 432

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
            S+L AC++   L+ G +IH  VV  GL +D  V N L+++Y+ CG ++++ ++F    +
Sbjct: 433 TSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQ 492

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
           R+ V +N MI GY       +A+ +F ++ EE +   +VTY ++L ACA+  +LE   ++
Sbjct: 493 RDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREI 552

Query: 467 HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLS 526
           H L  K  +  D  V NAL+  YAKCGS +DA +VF+ M   N +SWNA+I G + HG  
Sbjct: 553 HTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRG 612

Query: 527 AEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTS 586
            + L++F+ M+  G +P+ +TFV +LSACS+ GLLE+G  YF SM  ++ I P IEHY  
Sbjct: 613 QDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGC 672

Query: 587 MVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPED 646
           MV LLGRAG LD+A  LI+ +PFQ +  IW ALLGAC IH NV +   +A+  L  + ++
Sbjct: 673 MVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDN 732

Query: 647 EATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADM 695
              +V LS++YA A  W+ AA           +KEPG SWI+    +HYF A D SH   
Sbjct: 733 AVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQS 792

Query: 696 NIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSP 755
             I   L+ L    +  GY+PD  +V+ DV E EKE  +  HSE+LA+A+ L   PP + 
Sbjct: 793 EKIYAELDRLTHAMKMKGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTPPGTR 852

Query: 756 IRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           I I KNLR+C DCHTA K ISKIV REII RDV+RFHHF+DG CSCGD+W
Sbjct: 853 IHIFKNLRVCPDCHTATKFISKIVDREIIARDVNRFHHFKDGVCSCGDYW 902



 Score =  308 bits (789), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 177/594 (29%), Positives = 305/594 (51%), Gaps = 20/594 (3%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           ++ NS  Y   L+ CI+  DL     +H  +++     D +  N L+N+Y++   + +A 
Sbjct: 19  AQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEAR 78

Query: 112 KLFDEMP--ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           +++ ++   ER   S+   + GY       +A+ L   + + G   +     +FL    S
Sbjct: 79  QVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKS 138

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD------------- 216
            G  E    +     + G   +  V   +++ ++ CG +E AR+VFD             
Sbjct: 139 PGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTIT 198

Query: 217 -GLFNDC--FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY 273
            G + DC   E A   F +M   G  PN  T+  VL A      ++  K+ H   L   +
Sbjct: 199 IGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGH 258

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
           E D  V  AL+ +Y K G   + R++FE++  +D+I W+ MI   A+     +A E++ +
Sbjct: 259 ESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQ 318

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           M++  V PN+ T+V +L AC     L  G +IHS V + G  SD+ V NAL+ +Y++CG 
Sbjct: 319 MQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGS 378

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           ++++  +F +  +++ ++W  MI G  + G   +A+ ++ +M +  V    VTY+S+L A
Sbjct: 379 IKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNA 438

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
           C+S AALE G ++H   V+A    D  V N L++MY+ CGS+ DAR VFD M   + V++
Sbjct: 439 CSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAY 498

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA 573
           NAMI GY+ H L  E LK+FD +Q+ G +P+ +T++ +L+AC+N G LE       ++V 
Sbjct: 499 NAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWARE-IHTLVR 557

Query: 574 NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
             G         ++VS   + G    A+ + E +  + +V+ W A++G    H 
Sbjct: 558 KGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMT-KRNVISWNAIIGGSAQHG 610



 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 159/505 (31%), Positives = 255/505 (50%), Gaps = 20/505 (3%)

Query: 141 AVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALID 200
           AV +   L ++G ++N   +   LK  + +        V   + +     + +   ALI+
Sbjct: 7   AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66

Query: 201 AFSVCGCVEFARKVFDGL---------FN---------DCFEEALNFFSQMRAVGFKPNN 242
            +  CG +E AR+V+  L         +N            E+AL    QM+  G  P+ 
Sbjct: 67  MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126

Query: 243 FTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEE 302
            T    L +C     +   +  H  A++     D+ VA  +L++Y K G I  AR +F++
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDK 186

Query: 303 MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG 362
           M KK V+ W+  I  YA    S  A E+F +M Q  V PN+ T++SVL A ++   L  G
Sbjct: 187 MEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWG 246

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
             +HS ++  G  SD  V  AL+ +YAKCG  ++  ++F +   R+ + WNTMI G  + 
Sbjct: 247 KAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEG 306

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
           G   +A  ++++M  E V   ++TY  +L AC + AAL  G ++H    KA +  D+ V 
Sbjct: 307 GYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQ 366

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
           NALI MY++CGSI DARLVFD M   + +SW AMI G +  G  AE L V+  MQQ G  
Sbjct: 367 NALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVE 426

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           PN +T+  +L+ACS+   LE G    + +V   G+        ++V++    G +  A +
Sbjct: 427 PNRVTYTSILNACSSPAALEWGRRIHQQVV-EAGLATDAHVGNTLVNMYSMCGSVKDARQ 485

Query: 603 LIEGIPFQPSVMIWRALLGACIIHN 627
           + + +  Q  ++ + A++G    HN
Sbjct: 486 VFDRM-IQRDIVAYNAMIGGYAAHN 509



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 134/489 (27%), Positives = 241/489 (49%), Gaps = 20/489 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +Y + L +      L+    +H ++L  G+  D      L+ +Y K     D  ++F
Sbjct: 226 NRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVF 285

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           +++  R+ I++ T I G      + EA  +++ + REG   N   +   L   V+     
Sbjct: 286 EKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALH 345

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GLF 219
               + + V K G  S+  V  ALI  +S CG ++ AR VFD               GL 
Sbjct: 346 WGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLA 405

Query: 220 NDCF-EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
              F  EAL  + +M+  G +PN  T+  +L AC     +   +  H   ++     D +
Sbjct: 406 KSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAH 465

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V   L+++Y+  G + +AR++F+ M ++D++ ++ MI  YA  +L  +A++LF R+++  
Sbjct: 466 VGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEG 525

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           + P++ T++++L ACA    L+   +IH+LV + G  SD  V NAL+  YAKCG   ++ 
Sbjct: 526 LKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDAS 585

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            +F +  KRN ++WN +I G  Q G    A+ +F +M  E V    VT+ S+L AC+   
Sbjct: 586 IVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAG 645

Query: 459 ALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDAR-LVFDMMNDWNEVSWNA 515
            LE G +  C ++  ++ +   + +   ++D+  + G + +A  L+  M    N   W A
Sbjct: 646 LLEEGRRYFC-SMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGA 704

Query: 516 MISGYSMHG 524
           ++    +HG
Sbjct: 705 LLGACRIHG 713



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 125/296 (42%), Gaps = 27/296 (9%)

Query: 27  GLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKG 86
           G  A+A    Q+   +   P        N  +Y + L +C     L+    IH QV++ G
Sbjct: 408 GFGAEALTVYQEMQQAGVEP--------NRVTYTSILNACSSPAALEWGRRIHQQVVEAG 459

Query: 87  NCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFS 146
              D    N L+N+Y     + DA ++FD M +R+ +++   I GY   +   EA+ LF 
Sbjct: 460 LATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFD 519

Query: 147 TLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCG 206
            L  EG + +   +   L    + G  E    +   V K G  S+  VG AL+  ++ CG
Sbjct: 520 RLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCG 579

Query: 207 CVEFARKVFDGLFNDCF----------------EEALNFFSQMRAVGFKPNNFTFAFVLK 250
               A  VF+ +                     ++AL  F +M+  G KP+  TF  +L 
Sbjct: 580 SFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLS 639

Query: 251 ACLGLDTIRVAKSAHGCALKTCYEMDLYVA--VALLDLYTKSGEISNARRIFEEMP 304
           AC     +   +  + C++   + +   +     ++DL  ++G++  A  + + MP
Sbjct: 640 ACSHAGLLEEGRR-YFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMP 694


>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 858

 Score =  579 bits (1493), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 297/778 (38%), Positives = 446/778 (57%), Gaps = 27/778 (3%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  ++ + L++C    DL     +H   +  G   D F  N L+ +Y K   L D+ +LF
Sbjct: 81  NEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLF 140

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             + ERN +S+      Y  S    EAVGLF  + R G   N F+ +  L     +   +
Sbjct: 141 GGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGD 200

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------- 218
           L   +   + K+G D + F   AL+D +S  G +E A  VF  +                
Sbjct: 201 LGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCV 260

Query: 219 FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            +DC + AL    +M+  G +PN FT +  LKAC  +    + +  H   +K     DL+
Sbjct: 261 LHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLF 320

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
            AV L+D+Y+K   + +ARR ++ MPKKD+I W+ +I+ Y+Q    +DAV LF +M    
Sbjct: 321 AAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSED 380

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           +  NQ T  +VL++ A+++ + +  QIH++ ++ G+ SD +V N+L+D Y KC  ++ + 
Sbjct: 381 IDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEAS 440

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
           ++F E    + V + +MI  Y Q G+  +A+ ++ +M +  +       SS+L ACA+L+
Sbjct: 441 KIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLS 500

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           A E G Q+H   +K  +  D+  +N+L++MYAKCGSI DA   F  + +   VSW+AMI 
Sbjct: 501 AYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIG 560

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           GY+ HG   E L++F+ M + G  PN++T V VL AC++ GL+ +G+ YF+ M   +GI+
Sbjct: 561 GYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIK 620

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P  EHY  M+ LLGR+G L++A +L+  IPF+    +W ALLGA  IH N+E+G+ +A+ 
Sbjct: 621 PTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKM 680

Query: 639 ILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRA 687
           + D EPE   THVLL+NIYA A  WE  A            KEPG+SWIE +  V+ F  
Sbjct: 681 LFDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIV 740

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFAL 747
           GD SH+  + I   L+ L     KAGY   +   + +V + EKE+ L+ HSEKLA+AF L
Sbjct: 741 GDRSHSRSDEIYAKLDQLGDLLSKAGYSSIVEIDIHNVDKSEKEKLLYHHSEKLAVAFGL 800

Query: 748 FKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
              PP  PIR+ KNLRICVDCHT  K + KIV REII+RD++RFHHF+DG CSCGD+W
Sbjct: 801 IATPPGGPIRVKKNLRICVDCHTFFKFVCKIVSREIIVRDINRFHHFKDGSCSCGDYW 858



 Score =  289 bits (739), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 179/593 (30%), Positives = 304/593 (51%), Gaps = 19/593 (3%)

Query: 76  MTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVS 135
           M +H  ++K G   D    N L+ +Y K  R   A KL DE  E + +S+ + + GY  +
Sbjct: 1   MELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQN 60

Query: 136 SQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVG 195
               EA+ +F+ +   G + N F F + LK         +   V       G +S+ FV 
Sbjct: 61  GFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVA 120

Query: 196 TALIDAFSVCGCVEFARKVFDGL-------FNDCFE---------EALNFFSQMRAVGFK 239
             L+  ++ CG ++ +R++F G+       +N  F          EA+  F +M   G  
Sbjct: 121 NTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIM 180

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           PN F+ + +L AC GL    + +  HG  LK   ++D + A AL+D+Y+K+GEI  A  +
Sbjct: 181 PNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAV 240

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL 359
           F+++   DV+ W+ +IA     D +  A+ L   M+ +   PN FT  S L+ACA M   
Sbjct: 241 FQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFK 300

Query: 360 DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGY 419
           +LG Q+HS ++++   SD+F +  L+D+Y+KC  M+++   +   PK++ + WN +I GY
Sbjct: 301 ELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGY 360

Query: 420 VQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDV 479
            Q G+   A+ +FSKM  E +   + T S+VL++ ASL A++   Q+H +++K+    D 
Sbjct: 361 SQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDF 420

Query: 480 VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
            V N+L+D Y KC  I +A  +F+     + V++ +MI+ YS +G   E LK++  MQ  
Sbjct: 421 YVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDA 480

Query: 540 GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDK 599
             +P+      +L+AC+N    EQG+      +  +G    I    S+V++  + G ++ 
Sbjct: 481 DIKPDPFICSSLLNACANLSAYEQGKQLHVHAI-KFGFMCDIFASNSLVNMYAKCGSIED 539

Query: 600 AAKLIEGIPFQPSVMIWRALLGACIIH-NNVEIGRLSAQHILDFEPEDEATHV 651
           A +    IP    ++ W A++G    H +  E  RL  Q + D  P +  T V
Sbjct: 540 ADRAFSEIP-NRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLV 591



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/289 (21%), Positives = 122/289 (42%), Gaps = 32/289 (11%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           +FN  + +T L+S      ++    IH   +K G   D +  N LL+ Y K N + +A+K
Sbjct: 382 DFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASK 441

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +F+E    + +++ + I  Y+      EA+ L+  +     + +PF  ++ L    ++  
Sbjct: 442 IFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSA 501

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF--------- 223
            E    +     K G   + F   +L++ ++ CG +E A + F  + N            
Sbjct: 502 YEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGG 561

Query: 224 -------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
                  +EAL  F+QM   G  PN+ T   VL AC     +   K       +   +M+
Sbjct: 562 YAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGK-------QYFEKME 614

Query: 277 LYVAVA--------LLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
           +   +         ++DL  +SG+++ A  +   +P + D   W  ++ 
Sbjct: 615 VMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLG 663


>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
          Length = 771

 Score =  570 bits (1469), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 284/693 (40%), Positives = 425/693 (61%), Gaps = 27/693 (3%)

Query: 140 EAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALI 199
           EA+G+ +T+  +G  +    F   L+    +   E    V A + K G   N ++   L+
Sbjct: 79  EALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLL 138

Query: 200 DAFSVCGCVEFARKVFDGLFN----------DCFE------EALNFFSQMRAVGFKPNNF 243
             ++ CG +  AR+VFDG+ +          + F       EA   +  M+  G KP+  
Sbjct: 139 SMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKV 198

Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
           TF  +L A    + ++V +  H    K   E++  V  +L+ +Y K G+IS A+ IF+++
Sbjct: 199 TFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKL 258

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
           P+K+V+ W+ +IA YAQ      A+EL  +M+QA VAPN+ T+ S+LQ C T   L+ G 
Sbjct: 259 PEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGK 318

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
           ++H  +++ G   +++V NAL+ +Y KCG ++ + +LF + P R+ VTW  M+ GY QLG
Sbjct: 319 KVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLG 378

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN 483
              +A+ +F +M ++ +   ++T++S L +C+S A L+ G  +H   V A Y +DV + +
Sbjct: 379 FHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQS 438

Query: 484 ALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRP 543
           AL+ MYAKCGS+ DARLVF+ M++ N V+W AMI+G + HG   E L+ F+ M+++G +P
Sbjct: 439 ALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKP 498

Query: 544 NNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKL 603
           + +TF  VLSAC++ GL+E+G  +F+SM  +YGI+P +EHY+  V LLGRAGHL++A  +
Sbjct: 499 DKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENV 558

Query: 604 IEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW 663
           I  +PFQP   +W ALL AC IH++VE G  +A+++L  +P+D+  +V LSNIYA A  +
Sbjct: 559 ILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRY 618

Query: 664 EKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKA 712
           E A             KEPG SWIE  G VH F   D SH +   I   L  L  + ++ 
Sbjct: 619 EDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPEAKEIYAELGKLTEQIKEQ 678

Query: 713 GYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAI 772
           GY+PD   VL DV E++K + L  HSE+LA+ + L K PP +PIRI+KNLR+C DCHTA 
Sbjct: 679 GYVPDTRFVLHDVDEEQKVQTLCSHSERLAITYGLMKTPPGTPIRIVKNLRVCGDCHTAS 738

Query: 773 KIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           K ISK+V REII RD HRFHHF DG CSCGDFW
Sbjct: 739 KFISKVVGREIIARDAHRFHHFVDGVCSCGDFW 771



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 124/407 (30%), Positives = 234/407 (57%), Gaps = 4/407 (0%)

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
            +EAL   + M   G +  +  F  +L+ C  L ++   +  H   LK+  + + Y+   
Sbjct: 77  LKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENT 136

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           LL +Y K G +++ARR+F+ +  ++++ W+ MI  +   + +++A + +  M+ A   P+
Sbjct: 137 LLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPD 196

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           + TFVS+L A    E L +G ++H  + + GL  +  V  +L+ +YAKCG +  +  +F 
Sbjct: 197 KVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFD 256

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
           + P++N VTW  +I GY Q G+V  A+ +  KM + +V   ++TY+S+L+ C +  ALE 
Sbjct: 257 KLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEH 316

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G +VH   +++ Y  ++ V NALI MY KCG + +AR +F  +   + V+W AM++GY+ 
Sbjct: 317 GKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQ 376

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV-ANYGIEPCI 581
            G   E + +F  MQQ+G +P+ +TF   L++CS+   L++G++  + +V A Y ++  +
Sbjct: 377 LGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYL 436

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
           +  +++VS+  + G +D  A+L+     + +V+ W A++  C  H  
Sbjct: 437 Q--SALVSMYAKCGSMDD-ARLVFNQMSERNVVAWTAMITGCAQHGR 480



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 131/480 (27%), Positives = 240/480 (50%), Gaps = 20/480 (4%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           LQ C +   L+    +H  +LK G   + +  N LL++Y K   L DA ++FD + +RN 
Sbjct: 103 LQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNI 162

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +S+   I+ +   +Q +EA   + T+   G + +   F + L    +    ++   V   
Sbjct: 163 VSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHME 222

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDC----------------FEEA 226
           + K G +    VGT+L+  ++ CG +  A+ +FD L                     + A
Sbjct: 223 IAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVA 282

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           L    +M+     PN  T+  +L+ C     +   K  H   +++ Y  +++V  AL+ +
Sbjct: 283 LELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITM 342

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y K G +  AR++F ++P +DV+ W+ M+  YAQ     +A++LF RM+Q  + P++ TF
Sbjct: 343 YCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTF 402

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
            S L +C++   L  G  IH  +V  G   DV++ +AL+ +YAKCG M+++  +F +  +
Sbjct: 403 TSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSE 462

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
           RN V W  MI G  Q G   +A+  F +M ++ +   +VT++SVL AC  +  +E G + 
Sbjct: 463 RNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRK- 521

Query: 467 HCLTVKANYDMDVVVAN--ALIDMYAKCGSITDAR-LVFDMMNDWNEVSWNAMISGYSMH 523
           H  ++  +Y +  +V +    +D+  + G + +A  ++  M        W A++S   +H
Sbjct: 522 HFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIH 581



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 120/510 (23%), Positives = 218/510 (42%), Gaps = 74/510 (14%)

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
           LQ    +H ++ K G  L+      L+ +Y K   +  A  +FD++PE+N +++   I G
Sbjct: 213 LQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAG 272

Query: 132 YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSN 191
           Y    Q   A+ L   + +     N   +T+ L+   +    E    V   + + G+   
Sbjct: 273 YAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGRE 332

Query: 192 AFVGTALIDAFSVCGCVEFARKVFDGL-------------------FNDCFEEALNFFSQ 232
            +V  ALI  +  CG ++ ARK+F  L                   F+D   EA++ F +
Sbjct: 333 IWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHD---EAIDLFRR 389

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           M+  G KP+  TF   L +C     ++  KS H   +   Y +D+Y+  AL+ +Y K G 
Sbjct: 390 MQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGS 449

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           + +AR +F +M +++V+ W+ MI   AQ     +A+E F +M++  + P++ TF SVL A
Sbjct: 450 MDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSA 509

Query: 353 CATMEGLDLGNQ-IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
           C  +  ++ G +   S+ +  G+   V   +  +D+  + G +E +  +    P +    
Sbjct: 510 CTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQ---- 565

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
                                        P   V + ++L AC   + +E G +     +
Sbjct: 566 -----------------------------PGPSV-WGALLSACRIHSDVERGERAAENVL 595

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMM----------NDWNEVSWNAMI---- 517
           K + D D     AL ++YA  G   DA  V  +M            W EV     +    
Sbjct: 596 KLDPDDDGAYV-ALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVE 654

Query: 518 --SGYSMHGLSAEVLKVFDLMQQRGWRPNN 545
             S      + AE+ K+ + ++++G+ P+ 
Sbjct: 655 DKSHPEAKEIYAELGKLTEQIKEQGYVPDT 684



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 112/209 (53%), Gaps = 2/209 (0%)

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
           G + +A+ + + M+ +        +  +L+ CA L +LE G +VH   +K+    +  + 
Sbjct: 75  GRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLE 134

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
           N L+ MYAKCGS+TDAR VFD + D N VSW AMI  +     + E  K ++ M+  G +
Sbjct: 135 NTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCK 194

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           P+ +TFV +L+A +N  LL+ G+      +A  G+E      TS+V +  + G + KA  
Sbjct: 195 PDKVTFVSLLNAFTNPELLQVGQKVHME-IAKAGLELEPRVGTSLVGMYAKCGDISKAQV 253

Query: 603 LIEGIPFQPSVMIWRALLGACIIHNNVEI 631
           + + +P + +V+ W  L+        V++
Sbjct: 254 IFDKLP-EKNVVTWTLLIAGYAQQGQVDV 281



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/375 (21%), Positives = 157/375 (41%), Gaps = 56/375 (14%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +Y + LQ C     L+    +H  +++ G   +++  N L+ +Y K   L +A KLF
Sbjct: 297 NKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLF 356

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
            ++P R+ +++   + GY       EA+ LF  + ++G + +   FT+ L    S  + +
Sbjct: 357 GDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQ 416

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-----------GLFNDCF 223
               +   +   G+  + ++ +AL+  ++ CG ++ AR VF+            +   C 
Sbjct: 417 EGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCA 476

Query: 224 E-----EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
           +     EAL +F QM+  G KP+  TF  VL AC  +  +   +  H  ++   Y +   
Sbjct: 477 QHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRK-HFRSMYLDYGIKPM 535

Query: 279 VA--VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           V      +DL  ++G +  A  +   MP                                
Sbjct: 536 VEHYSCFVDLLGRAGHLEEAENVILTMP-------------------------------- 563

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD-VFVSNALMDVYAKCGRME 395
               P    + ++L AC     ++ G +    V+++    D  +V  AL ++YA  GR E
Sbjct: 564 --FQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYV--ALSNIYAAAGRYE 619

Query: 396 NSVELFAESPKRNHV 410
           ++ ++     KR+ V
Sbjct: 620 DAEKVRQVMEKRDVV 634


>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 933

 Score =  568 bits (1465), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 294/778 (37%), Positives = 452/778 (58%), Gaps = 27/778 (3%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  ++++ L++C    DL+    +H  V+  G   D+F  N L+ +Y K +   D+ +LF
Sbjct: 156 NEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLF 215

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           DE+PERN +S+      Y       EAVGLF  +   G + N F+ ++ +     +  + 
Sbjct: 216 DEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSS 275

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------- 218
               +   + KLG+D + F   AL+D ++  G +  A  VF+ +                
Sbjct: 276 RGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCV 335

Query: 219 FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            ++  E+AL    QM+  G  PN FT +  LKAC G+    + +  H   +K   E DL+
Sbjct: 336 LHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLF 395

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V+V L+D+Y+K   + +AR  F  +P+KD+I W+ +I+ Y+Q    ++A+ LF  M +  
Sbjct: 396 VSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEG 455

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           +  NQ T  ++L++ A ++ + +  Q+H L V+ G  SD++V N+L+D Y KC  +E++ 
Sbjct: 456 IGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAE 515

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            +F E    + V++ +MI  Y Q G+  +A+ +F +M + ++       SS+L ACA+L+
Sbjct: 516 RIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLS 575

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           A E G Q+H   +K  + +D+   N+L++MYAKCGSI DA   F  + +   VSW+AMI 
Sbjct: 576 AFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIG 635

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           G + HG   + L++F+ M + G  PN++T V VL AC++ GL+ + + YF+SM   +G +
Sbjct: 636 GLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFK 695

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P  EHY  M+ LLGRAG +++A +L+  +PF+ +  +W ALLGA  IH +VE+GR +A+ 
Sbjct: 696 PMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEM 755

Query: 639 ILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRA 687
           +   EPE   THVLL+NIYA A  WE  A            KEPG+SWIE +  V+ F  
Sbjct: 756 LFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLV 815

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFAL 747
           GD SH     I   L+ L+    KAGY+P +   L DV + EKE  L+ HSEKLA+AF L
Sbjct: 816 GDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGL 875

Query: 748 FKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
              P  +PIR+ KNLR+CVDCHTA K I KIV REII+RD++RFHHF+DG CSCGD+W
Sbjct: 876 IATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 933



 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 186/621 (29%), Positives = 314/621 (50%), Gaps = 25/621 (4%)

Query: 37  QQCSNSTTTPITFSVSEFN----SHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLF 92
           Q   +  TT I   + + N    S SY+  L  C     L+  + IH  + K G   D  
Sbjct: 33  QFSQDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPS 92

Query: 93  ATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREG 152
             N L+N+Y K      A KL DE  E + +S+   I GY  +     A+  F  +H  G
Sbjct: 93  IRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLG 152

Query: 153 HELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFAR 212
            + N F F++ LK    +    +   V   V   G + + FV   L+  ++ C     ++
Sbjct: 153 VKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSK 212

Query: 213 KVFD-----------GLFN-----DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLD 256
           ++FD            LF+     D   EA+  F +M   G KPN F+ + ++ AC GL 
Sbjct: 213 RLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLR 272

Query: 257 TIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIA 316
                K  HG  +K  Y+ D + A AL+D+Y K G++++A  +FE++ + D++ W+ +IA
Sbjct: 273 DSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIA 332

Query: 317 RYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLS 376
                +    A+EL  +M+++ + PN FT  S L+ACA M   +LG Q+HS ++++ + S
Sbjct: 333 GCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMES 392

Query: 377 DVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML 436
           D+FVS  L+D+Y+KC  +E++   F   P+++ + WN +I GY Q  E  +A+ +F +M 
Sbjct: 393 DLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMH 452

Query: 437 EEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSIT 496
           +E +   + T S++L++ A L  +    QVH L+VK+ +  D+ V N+LID Y KC  + 
Sbjct: 453 KEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVE 512

Query: 497 DARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS 556
           DA  +F+     + VS+ +MI+ Y+ +G   E LK+F  MQ    +P+      +L+AC+
Sbjct: 513 DAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACA 572

Query: 557 NGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIW 616
           N    EQG+      +  YG    I    S+V++  + G +D A +    +  +  ++ W
Sbjct: 573 NLSAFEQGKQ-LHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELT-ERGIVSW 630

Query: 617 RALLGACIIHNNVEIGRLSAQ 637
            A++G    H +   GR + Q
Sbjct: 631 SAMIGGLAQHGH---GRQALQ 648



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 147/513 (28%), Positives = 260/513 (50%), Gaps = 49/513 (9%)

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG----------------LFNDC 222
           + A + K G   +  +   LI+ +S C    +ARK+ D                   N  
Sbjct: 78  IHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGL 137

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
              AL  F +M  +G K N FTF+ VLKAC  +  +R+ K  HG  + + +E D++VA  
Sbjct: 138 GGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANT 197

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+ +Y K  E  +++R+F+E+P+++V+ W+ + + Y Q D   +AV LF  M  + + PN
Sbjct: 198 LVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPN 257

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           +F+  S++ AC  +     G  IH  ++++G   D F +NAL+D+YAK G + +++ +F 
Sbjct: 258 EFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFE 317

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
           +  + + V+WN +I G V      +A+ +  +M    +     T SS L+ACA +   E 
Sbjct: 318 KIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKEL 377

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G Q+H   +K + + D+ V+  L+DMY+KC  + DAR+ F+++ + + ++WNA+ISGYS 
Sbjct: 378 GRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQ 437

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS-----------NGGLLEQG---EAY- 567
           +    E L +F  M + G   N  T   +L + +           +G  ++ G   + Y 
Sbjct: 438 YWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYV 497

Query: 568 FKSMVANYG-----------IEPC----IEHYTSMVSLLGRAGHLDKAAKL---IEGIPF 609
             S++ +YG            E C    +  +TSM++   + G  ++A KL   ++ +  
Sbjct: 498 VNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMEL 557

Query: 610 QPSVMIWRALLGACIIHNNVEIGRLSAQHILDF 642
           +P   +  +LL AC   +  E G+    HIL +
Sbjct: 558 KPDRFVCSSLLNACANLSAFEQGKQLHVHILKY 590



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 118/274 (43%), Gaps = 29/274 (10%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
           FN  + +T L+S      +     +H   +K G   D++  N L++ Y K + + DA ++
Sbjct: 458 FNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERI 517

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNP--FAFTAFLKVLVSMG 171
           F+E    + +SF + I  Y    Q  EA+ LF  L  +  EL P  F  ++ L    ++ 
Sbjct: 518 FEECTIGDLVSFTSMITAYAQYGQGEEALKLF--LEMQDMELKPDRFVCSSLLNACANLS 575

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF-------- 223
             E    +   + K G   + F G +L++ ++ CG ++ A + F  L             
Sbjct: 576 AFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIG 635

Query: 224 --------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
                    +AL  F+QM   G  PN+ T   VL AC     +  AK       ++  E+
Sbjct: 636 GLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAK----LYFESMEEL 691

Query: 276 DLYVAVA-----LLDLYTKSGEISNARRIFEEMP 304
             +  +      ++DL  ++G+I+ A  +  +MP
Sbjct: 692 FGFKPMQEHYACMIDLLGRAGKINEAVELVNKMP 725


>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 804

 Score =  567 bits (1462), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 303/780 (38%), Positives = 438/780 (56%), Gaps = 27/780 (3%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           + +S+ Y   LQSC++  DL     +H  +L+ G   +++ TN LL +Y     + +A +
Sbjct: 25  QVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQ 84

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           LFD+   ++ +S+   I GY       EA  LF+ + +E  E + F F + L    S   
Sbjct: 85  LFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAV 144

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN------------ 220
                 +   V + G  ++  VG ALI  ++ CG V  AR+VFD + +            
Sbjct: 145 LNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGA 204

Query: 221 ----DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
                  EE+L  +  M     +P+  T+  VL AC  L  +   K  H   +++ Y  D
Sbjct: 205 YAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSD 264

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           + V+ AL  +Y K G   +AR +FE +  +DVI W+ MI  +  +    +A   F RM +
Sbjct: 265 VRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLE 324

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             VAP++ T+ +VL ACA   GL  G +IH+   + GL+SDV   NAL+++Y+K G M++
Sbjct: 325 EGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKD 384

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           + ++F   PKR+ V+W T++  Y    +V ++   F +ML++ V A ++TY  VL+AC++
Sbjct: 385 ARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSN 444

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
             AL+ G ++H   VKA    D+ V NAL+ MY KCGS+ DA  VF+ M+  + V+WN +
Sbjct: 445 PVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTL 504

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           I G   +G   E L+ +++M+  G RPN  TFV VLSAC    L+E+G   F  M  +YG
Sbjct: 505 IGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYG 564

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
           I P  +HY  MV +L RAGHL +A  +I  IP +PS  +W ALL AC IH NVEIG  +A
Sbjct: 565 IVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAA 624

Query: 637 QHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYF 685
           +H L  EP++   +V LS IYA A  W           E+   KEPG SWIE  G VH F
Sbjct: 625 EHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEVHSF 684

Query: 686 RAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAF 745
            A D SH     I   LE L  + +  GY+PD   V+ D+ ++ KER +  HSEKLA+A+
Sbjct: 685 VARDQSHPRTQEIYAELETLKKQMKSLGYVPDTRFVMHDLDDEGKERAVCHHSEKLAIAY 744

Query: 746 ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            L   PP +PIRI KNLR+C DCHTA K ISKI +REII RD HRFHHF++G CSCGD+W
Sbjct: 745 GLISTPPGTPIRISKNLRVCTDCHTATKFISKITKREIIARDAHRFHHFKNGECSCGDYW 804



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 129/385 (33%), Positives = 219/385 (56%), Gaps = 2/385 (0%)

Query: 237 GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNA 296
           G + +++ +  +L++C+    + V K  H   L+   + ++Y+   LL LY   G ++ A
Sbjct: 23  GPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEA 82

Query: 297 RRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM 356
           R++F++   K V+ W+ MI+ YA   L+ +A  LF  M+Q  + P++FTFVS+L AC++ 
Sbjct: 83  RQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSP 142

Query: 357 EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMI 416
             L+ G +IH  V+  GL +D  V NAL+ +YAKCG + ++  +F     R+ V+W T+ 
Sbjct: 143 AVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLT 202

Query: 417 VGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD 476
             Y + G   +++  +  ML+E+V  + +TY +VL AC SLAALE G Q+H   V++ Y 
Sbjct: 203 GAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYH 262

Query: 477 MDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLM 536
            DV V+ AL  MY KCG+  DAR VF+ ++  + ++WN MI G+   G   E    F  M
Sbjct: 263 SDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRM 322

Query: 537 QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGH 596
            + G  P+  T+  VLSAC+  G L +G+    +  A  G+   +    +++++  +AG 
Sbjct: 323 LEEGVAPDRATYTTVLSACARPGGLARGKE-IHARAAKDGLVSDVRFGNALINMYSKAGS 381

Query: 597 LDKAAKLIEGIPFQPSVMIWRALLG 621
           +  A ++ + +P +  V+ W  LLG
Sbjct: 382 MKDARQVFDRMP-KRDVVSWTTLLG 405


>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
 gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
          Length = 781

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 303/765 (39%), Positives = 449/765 (58%), Gaps = 36/765 (4%)

Query: 75  AMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTV 134
           A   H  VLK G   DLF  N L+NVYV++     A KLFDEMP+RN +++   I GYT 
Sbjct: 19  ANLFHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQ 78

Query: 135 SSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLV-SMGWAELCPCVFACVYKLG-HDSNA 192
           +    +A G+   +  EG   N FAF + ++    SM W      V     + G +D+  
Sbjct: 79  NGMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKV 138

Query: 193 FVGTALIDAFSVCGCVEFARKVFDGLF-----------------NDCFEEALNFFSQMRA 235
            VG  LI+ ++ CG ++ AR VF GL                  N CFE+A+  ++ MR 
Sbjct: 139 AVGNGLINMYAKCGDIDHARSVF-GLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRK 197

Query: 236 VGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISN 295
            G  P+NF     L +C  L  I + +  HG  +K   +MD+ V+  LL LY ++  ++ 
Sbjct: 198 TGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAE 257

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSI-DAVELFCRMRQAFVAPNQFTFVSVLQACA 354
            +++F  M ++D + W+ +I   A +  S+ +A+E+F  M +A  +PN+ TF+++L   +
Sbjct: 258 CQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVS 317

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE-SPKRNHVTWN 413
           ++    L +QIH+L+++  +  D  + NAL+  Y K G MEN  E+F+  S +R+ V+WN
Sbjct: 318 SLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWN 377

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
           +MI GY+    + KAM +   M++        T+++VL ACA++A LE GM+VH   ++A
Sbjct: 378 SMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRA 437

Query: 474 NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVF 533
             + DVV+ +AL+DMY+KCG I  A   F++M   N  SWN+MISGY+ HG     L++F
Sbjct: 438 CLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLF 497

Query: 534 DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGR 593
             M+  G  P+++TFVGVLSACS+ GL+++G  YFKSM   YG+ P +EHY+ MV LLGR
Sbjct: 498 TRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGR 557

Query: 594 AGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN--VEIGRLSAQHILDFEPEDEATHV 651
           AG LDK    I  +P +P+++IWR +LGAC   N    E+GR +A+ + + +P++   +V
Sbjct: 558 AGELDKIENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQNAVNYV 617

Query: 652 LLSNIYAMARSWEK-----------AASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRG 700
           LLSN+YA    WE            A  KE G SW+  +  VH F AGD SH +  +I  
Sbjct: 618 LLSNMYASGGKWEDMARTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGDNSHPEKGLIYA 677

Query: 701 MLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIK 760
            L+ L+ K R AGY+P +   L D+  + KE  L  HSEKLA+AF L +     PIRI+K
Sbjct: 678 KLKELDKKIRDAGYVPQIKFALYDLEPENKEELLSYHSEKLAVAFVLTR-NSGLPIRIMK 736

Query: 761 NLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           NLR+C DCH+A K ISK+V R I++RD +RFHHF+DG CSC D+W
Sbjct: 737 NLRVCGDCHSAFKYISKVVDRSIVLRDSNRFHHFEDGKCSCRDYW 781



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/411 (26%), Positives = 191/411 (46%), Gaps = 27/411 (6%)

Query: 61  TSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPER 120
           ++L SC     +      H + +K G  +D+  +N LL +Y + +RL +  K+F  M ER
Sbjct: 209 SALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLER 268

Query: 121 NTISFVTTIQGYTVSSQFV-EAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCV 179
           + +S+ T I     S   V EA+ +F  + R G   N   F   L  + S+  ++L   +
Sbjct: 269 DQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQI 328

Query: 180 FACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-----------------FNDC 222
            A + K     +  +  AL+  +   G +E   ++F  +                  N+ 
Sbjct: 329 HALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNEL 388

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
             +A++    M   G + + FTFA VL AC  + T+      H CA++ C E D+ +  A
Sbjct: 389 LCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSA 448

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+D+Y+K G I  A R F  MP +++  W+ MI+ YA+     +A+ LF RM+ +   P+
Sbjct: 449 LVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPD 508

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRV-GLLSDVFVSNALMDVYAKCGRMENSVELF 401
             TFV VL AC+ +  +D G +    +  V GL+  V   + ++D+  + G ++      
Sbjct: 509 HITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFI 568

Query: 402 AESP-KRNHVTWNTMI----VGYVQLGEVGKAMIMFSKMLEEQVPATEVTY 447
            + P K N + W T++     G  +  E+G+     ++ML    P   V Y
Sbjct: 569 NKMPIKPNILIWRTVLGACCRGNGRKTELGRRA---AEMLFNMDPQNAVNY 616



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 4/116 (3%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCL--DLFATNVLLNVYVKLNRLPDATKLFD 115
           ++AT L +C     L+  M +H   ++   CL  D+   + L+++Y K  R+  A++ F+
Sbjct: 410 TFATVLSACATVATLECGMEVHACAIRA--CLESDVVIGSALVDMYSKCGRIDYASRFFN 467

Query: 116 EMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
            MP RN  S+ + I GY        A+ LF+ +   G   +   F   L     +G
Sbjct: 468 LMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIG 523


>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 919

 Score =  563 bits (1450), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 294/807 (36%), Positives = 450/807 (55%), Gaps = 39/807 (4%)

Query: 27  GLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKG 86
           G  A        CS    TP   S          + L +C +    +    +H QV K+G
Sbjct: 124 GEEAVGLYHQMHCSGVVPTPYVLS----------SVLSACTKAALFEQGRLVHAQVYKQG 173

Query: 87  NCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFS 146
           +C +    N L+ +Y++   L  A ++F EMP  + ++F T I  +        A+ +F 
Sbjct: 174 SCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFE 233

Query: 147 TLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCG 206
            +   G   +     + L    S+G       + + + K G   +  +  +L+D +  CG
Sbjct: 234 EMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCG 293

Query: 207 CVEFARKVFD-----------------GLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVL 249
            +  A ++F                  G  +D   ++ + F QM A G +PN FT+  +L
Sbjct: 294 VIVEALEIFKSGDRTNVVLWNLMLVAYGQISD-LAKSFDLFCQMVAAGVRPNEFTYPCLL 352

Query: 250 KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
           + C     I + +  H  ++KT +E D+YV+  L+D+Y+K G +  ARRI E +  KDV+
Sbjct: 353 RTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVV 412

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
            W+ MIA Y Q +   +A+E F  M+   + P+     S + ACA ++ +  G QIHS V
Sbjct: 413 SWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRV 472

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAM 429
              G  +DV + NAL+++YA+CGR + +  LF     ++ +TWN M+ G+ Q G   +A+
Sbjct: 473 YVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEAL 532

Query: 430 IMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMY 489
            +F KM +  V     T+ S + A A+LA ++ G Q+H   +K     +  VANALI +Y
Sbjct: 533 EVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLY 592

Query: 490 AKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFV 549
            KCGSI DA++ F  M++ N VSWN +I+  S HG   E L +FD M+Q G +PN++TF+
Sbjct: 593 GKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFI 652

Query: 550 GVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF 609
           GVL+ACS+ GL+E+G  YFKSM + +GI P  +HY  +V +LGRAG LD+A K +E +P 
Sbjct: 653 GVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPV 712

Query: 610 QPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW------ 663
             + M+WR LL AC +H N+EIG L+A+++L+ EP D A++VLLSN YA+   W      
Sbjct: 713 SANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGKWACRDHV 772

Query: 664 -----EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDL 718
                ++   KEPG SWIE + +VH F  GD  H   + I   L  L+ +  K GYI   
Sbjct: 773 RKMMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAHQIYKYLADLDDRLAKIGYIQGN 832

Query: 719 SAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKI 778
             +  +  +++K+   +VHSEKLA+AF L  +PPS P+R+IKNLR+C DCHT +K  S++
Sbjct: 833 YFLFHEKEKEQKDPTAFVHSEKLAVAFGLMSLPPSMPLRVIKNLRVCNDCHTWMKFTSEV 892

Query: 779 VQREIIIRDVHRFHHFQDGCCSCGDFW 805
           + REI++RDV+RFHHF +G CSCGDFW
Sbjct: 893 MGREIVLRDVYRFHHFNNGNCSCGDFW 919



 Score =  282 bits (721), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 167/540 (30%), Positives = 273/540 (50%), Gaps = 17/540 (3%)

Query: 77  TIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSS 136
            IH + +  G   D  A N+L+++Y K   +  A ++F+++  R+ +S+V  + GY  + 
Sbjct: 63  VIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNG 122

Query: 137 QFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGT 196
              EAVGL+  +H  G    P+  ++ L         E    V A VYK G  S   VG 
Sbjct: 123 LGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGN 182

Query: 197 ALIDAFSVCGCVEFARKVFDGL-------FNDCF---------EEALNFFSQMRAVGFKP 240
           ALI  +   G +  A +VF  +       FN            E AL  F +MR  G+ P
Sbjct: 183 ALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTP 242

Query: 241 NNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIF 300
           +  T A +L AC  +  +   K  H   LK     D  +  +LLDLY K G I  A  IF
Sbjct: 243 DCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIF 302

Query: 301 EEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLD 360
           +   + +V+ W+ M+  Y Q      + +LFC+M  A V PN+FT+  +L+ C     ++
Sbjct: 303 KSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEIN 362

Query: 361 LGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYV 420
           LG QIH L ++ G  SD++VS  L+D+Y+K G ++ +  +      ++ V+W +MI GYV
Sbjct: 363 LGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYV 422

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV 480
           Q     +A+  F  M    +    +  +S + ACA + A+  G Q+H     + Y  DV 
Sbjct: 423 QHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVS 482

Query: 481 VANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG 540
           + NAL+++YA+CG   +A  +F+ +   ++++WN M+SG++  GL  E L+VF  M Q G
Sbjct: 483 IWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAG 542

Query: 541 WRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKA 600
            + N  TFV  +SA +N   ++QG+    +++   G     E   +++SL G+ G ++ A
Sbjct: 543 VKYNVFTFVSSISASANLADIKQGKQIHATVIKT-GCTSETEVANALISLYGKCGSIEDA 601



 Score =  245 bits (625), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 152/522 (29%), Positives = 252/522 (48%), Gaps = 21/522 (4%)

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFT-AFLKVLVSMGWAEL 175
           M  R   S   ++ G+       + + LF+   R+   L    F  A  +   S+    L
Sbjct: 1   MTRRAAASLNKSLTGFLAHEDPEKLLSLFAAKVRQCRGLGSVDFACALRECRGSVKHWPL 60

Query: 176 CPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF---------------- 219
            P + A     G   +   G  LID ++  G V+ AR+VF+ L                 
Sbjct: 61  VPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYAR 120

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           N   EEA+  + QM   G  P  +  + VL AC         +  H    K     +  V
Sbjct: 121 NGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVV 180

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
             AL+ LY + G +S A R+F EMP  D + ++ +I+R+AQ      A+E+F  MR +  
Sbjct: 181 GNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGW 240

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
            P+  T  S+L ACA++  L+ G Q+HS +++ G+  D  +  +L+D+Y KCG +  ++E
Sbjct: 241 TPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALE 300

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +F    + N V WN M+V Y Q+ ++ K+  +F +M+   V   E TY  +LR C     
Sbjct: 301 IFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGE 360

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
           +  G Q+H L++K  ++ D+ V+  LIDMY+K G +  AR + +++   + VSW +MI+G
Sbjct: 361 INLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAG 420

Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEA-YFKSMVANYGIE 578
           Y  H    E L+ F  MQ  G  P+N+     +SAC+    + QG+  + +  V+ Y  +
Sbjct: 421 YVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSAD 480

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
             I  + ++V+L  R G   +A  L E I  +  +  W  ++
Sbjct: 481 VSI--WNALVNLYARCGRSKEAFSLFEAIEHKDKI-TWNGMV 519


>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 723

 Score =  560 bits (1444), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 281/699 (40%), Positives = 427/699 (61%), Gaps = 28/699 (4%)

Query: 135 SSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFV 194
           + +  EA+G+ +T+  +G  +    F   L+    +   E    V A + K G   N ++
Sbjct: 25  TGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYL 84

Query: 195 GTALIDAFSVCGCVEFARKVFDGLFN----------DCFE------EALNFFSQMRAVGF 238
              L+  ++ CG +  AR+VFD + +          + F       EA   +  M+  G 
Sbjct: 85  ENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGC 144

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
           KP+  TF  +L A    + +++ +  H   ++   E++  V  +L+ +Y K G+IS AR 
Sbjct: 145 KPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARV 204

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           IF+ +P+K+V+ W+ +IA YAQ      A+EL   M+QA VAPN+ TF S+LQ C T   
Sbjct: 205 IFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAA 264

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           L+ G ++H  +++ G   +++V N+L+ +Y KCG +E + +LF++ P R+ VTW  M+ G
Sbjct: 265 LEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTG 324

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           Y QLG   +A+ +F +M ++ +   ++T++SVL +C+S A L+ G ++H   V A Y++D
Sbjct: 325 YAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLD 384

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG-YSMHGLSAEVLKVFDLMQ 537
           V + +AL+ MYAKCGS+ DA LVF+ M++ N V+W A+I+G  + HG   E L+ FD M+
Sbjct: 385 VYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMK 444

Query: 538 QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHL 597
           ++G +P+ +TF  VLSAC++ GL+E+G  +F+SM  +YGI+P +EHY+  V LLGRAGHL
Sbjct: 445 KQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHL 504

Query: 598 DKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIY 657
           ++A  +I  +PF P   +W ALL AC +H++VE G  +A+++L  +P+D+  +V LS+IY
Sbjct: 505 EEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIY 564

Query: 658 AMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLN 706
           A A  +E A             KEPG SWIE  G VH F   D SH +   I   L  L 
Sbjct: 565 AAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPESEQIYVELGKLT 624

Query: 707 MKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICV 766
            + ++ GY+PD   VL DV E++KER L+ HSE+LA+ + L K PP  PIRI+KNLR+C 
Sbjct: 625 EQIKEMGYVPDTRFVLHDVDEEQKERILFSHSERLAITYGLMKTPPGMPIRIVKNLRVCG 684

Query: 767 DCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           DCHTA K ISK+V REII RD  RFHHF DG CSCGDFW
Sbjct: 685 DCHTATKFISKVVGREIIARDAQRFHHFADGVCSCGDFW 723



 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 133/481 (27%), Positives = 241/481 (50%), Gaps = 21/481 (4%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           LQ C +   L+    +H  +LK G   + +  N LL++Y K   L DA ++FD + +RN 
Sbjct: 54  LQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNI 113

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +S+   I+ +   ++ +EA   + T+   G + +   F + L    +    +L   V   
Sbjct: 114 VSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHME 173

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDC----------------FEEA 226
           + + G +    VGT+L+  ++ CG +  AR +FD L                     + A
Sbjct: 174 IVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVA 233

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           L     M+     PN  TFA +L+ C     +   K  H   +++ Y  +L+V  +L+ +
Sbjct: 234 LELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITM 293

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y K G +  AR++F ++P +DV+ W+ M+  YAQ     +A+ LF RM+Q  + P++ TF
Sbjct: 294 YCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTF 353

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
            SVL +C++   L  G +IH  +V  G   DV++ +AL+ +YAKCG M+++  +F +  +
Sbjct: 354 TSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSE 413

Query: 407 RNHVTWNTMIVG-YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
           RN V W  +I G   Q G   +A+  F +M ++ +   +VT++SVL AC  +  +E G +
Sbjct: 414 RNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRK 473

Query: 466 VHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDAR-LVFDMMNDWNEVSWNAMISGYSM 522
            H  ++  +Y +  +V +    +D+  + G + +A  ++  M        W A++S   +
Sbjct: 474 -HFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRV 532

Query: 523 H 523
           H
Sbjct: 533 H 533



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/376 (22%), Positives = 158/376 (42%), Gaps = 57/376 (15%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  ++A+ LQ C     L+    +H  +++ G   +L+  N L+ +Y K   L +A KLF
Sbjct: 248 NKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLF 307

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
            ++P R+ +++   + GY       EA+ LF  + ++G + +   FT+ L    S  + +
Sbjct: 308 SDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQ 367

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-----------GLFNDC- 222
               +   +   G++ + ++ +AL+  ++ CG ++ A  VF+            +   C 
Sbjct: 368 EGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCC 427

Query: 223 -----FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
                  EAL +F QM+  G KP+  TF  VL AC  +  +   +  H  ++   Y +  
Sbjct: 428 AQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRK-HFRSMYLDYGIKP 486

Query: 278 YVA--VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
            V      +DL  ++G +  A  +   MP                               
Sbjct: 487 MVEHYSCFVDLLGRAGHLEEAENVILSMP------------------------------- 515

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD-VFVSNALMDVYAKCGRM 394
             F+ P    + ++L AC     ++ G +    V+++    D  +V  AL  +YA  GR 
Sbjct: 516 --FI-PGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYV--ALSSIYAAAGRY 570

Query: 395 ENSVELFAESPKRNHV 410
           E++ ++     KR+ V
Sbjct: 571 EDAEKVRQVMEKRDVV 586


>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
 gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
          Length = 786

 Score =  560 bits (1443), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 294/778 (37%), Positives = 441/778 (56%), Gaps = 27/778 (3%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  ++ + L++C    DL     +H  V+  G   D F  N L+ +Y K     DA  LF
Sbjct: 9   NEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLF 68

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D +P+R+ +S+      Y  S    EAV LF  +   G   N F+ ++ + V   +  + 
Sbjct: 69  DAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSV 128

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------- 218
               +   + KLG+DS+AF   AL+D ++  G +E A  VFD +                
Sbjct: 129 QGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCV 188

Query: 219 FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            ++    AL    +M   G  PN FT +  LKAC G+    + +  H   +K     D +
Sbjct: 189 LHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSF 248

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           + V L+D+Y+K   + +AR +F+ MP++D+I W+ +I+ ++Q +   +A  LF  M    
Sbjct: 249 LGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEG 308

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           +  NQ T  +VL++ A ++   +  QIH+L ++ G   D +V N+L+D Y KCG +E++ 
Sbjct: 309 IGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDAT 368

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            +F ESP  + V + +++  Y Q G+  +A+ ++ +M +  +       SS+L ACASL+
Sbjct: 369 RVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLS 428

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           A E G QVH   +K  +  D+   N+L++MYAKCGSI DA   F  +     VSW+AMI 
Sbjct: 429 AYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIG 488

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           G + HG   E L++F  M + G  PN++T V VL AC++ GL+ + + YF SM   +GIE
Sbjct: 489 GLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIE 548

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P  EHY  M+ LLGRAG L+ A +L+  +PFQ + ++W ALLGA  IH N+++G  +A+ 
Sbjct: 549 PMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQAAEM 608

Query: 639 ILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRA 687
           +L  EPE   THVLL+NIYA    W+K A            KEPG+SW+E +  V+ F  
Sbjct: 609 LLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIV 668

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFAL 747
           GD SH+    I   L+ L+   +KAGY+P +   L DV   EKE+ L+ HSEKLA+AF L
Sbjct: 669 GDRSHSRSTEIYAKLDELSDLLKKAGYVPMVEIDLHDVERSEKEQLLYHHSEKLAVAFGL 728

Query: 748 FKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
              PP +PIR+ KNLRIC DCHT +K ISKIV REII+RD +RFHHF++G CSCG++W
Sbjct: 729 IATPPGAPIRVKKNLRICFDCHTVLKFISKIVSREIIVRDTNRFHHFREGSCSCGEYW 786



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 146/469 (31%), Positives = 231/469 (49%), Gaps = 34/469 (7%)

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           M  +G K N F F  VLKAC     + + K  HG  + T ++ D +VA +L+ LY K G 
Sbjct: 1   MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
             +AR +F+ +P + V+ W+ + + Y  +D+  +AV LF  M  + + PN+F+  S++  
Sbjct: 61  FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINV 120

Query: 353 CATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTW 412
           C  +E    G +IH  ++++G  SD F +NAL+D+YAK G +E++  +F E  K + V+W
Sbjct: 121 CTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSW 180

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
           N +I G V      +A+ +  +M +  +     T SS L+ACA +A  E G Q+H   +K
Sbjct: 181 NAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIK 240

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
            +   D  +   LIDMY+KC S+ DARLVF +M + + ++WNA+ISG+S +    E   +
Sbjct: 241 MDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASL 300

Query: 533 FDLMQQRGWRPNNLTFVGVLS---------------ACSNGGLLEQGEAYFKSMVANYGI 577
           F LM   G   N  T   VL                A S     E       S++  YG 
Sbjct: 301 FPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGK 360

Query: 578 EPCIEH---------------YTSMVSLLGRAGHLDKAAKL---IEGIPFQPSVMIWRAL 619
              +E                +TS+V+   + G  ++A +L   ++    +P   +  +L
Sbjct: 361 CGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSL 420

Query: 620 LGACIIHNNVEIGRLSAQHILDFE-PEDEATHVLLSNIYAMARSWEKAA 667
           L AC   +  E G+    HIL F    D      L N+YA   S E A+
Sbjct: 421 LNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDAS 469


>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 866

 Score =  554 bits (1427), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 297/757 (39%), Positives = 439/757 (57%), Gaps = 33/757 (4%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           +HCQ +K G   D+     L+++Y+K   + D  ++FDEM  +N +S+ + + GY  +  
Sbjct: 114 VHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGL 173

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
             +A+ LFS +  EG + NPF F A L  L + G  E    V   V K G DS  FVG +
Sbjct: 174 NEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNS 233

Query: 198 LIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPN 241
           +++ +S    V  A+ VFD +                 N    EA   F +MR  G K  
Sbjct: 234 MVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLT 293

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
              FA V+K C  +  +  AK  H   +K   + DL +  AL+  Y+K  EI +A ++F 
Sbjct: 294 QTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFC 353

Query: 302 EMPK-KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLD 360
            M   ++V+ W+ +I+ Y Q   +  A+ LFC+MR+  V PN FT+ ++L A A +    
Sbjct: 354 MMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSP-- 411

Query: 361 LGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYV 420
             +QIH+LVV+    +   V  AL D Y+K G    + ++F    +++ V W+ M+ GY 
Sbjct: 412 --SQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYA 469

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS-LAALEPGMQVHCLTVKANYDMDV 479
           Q+G++  A+ +F ++ +E V   E T+SSVL ACA+  A++E G Q H  ++K+ +   +
Sbjct: 470 QMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNAL 529

Query: 480 VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
            V++AL+ MYAK G+I  A  VF    D + VSWN+MISGY+ HG   + LK+F+ M+ +
Sbjct: 530 CVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSK 589

Query: 540 GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDK 599
               + +TF+GV+SAC++ GL+ +G+ YF  MV +Y I P +EHY+ MV L  RAG L+K
Sbjct: 590 NLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEK 649

Query: 600 AAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAM 659
           A  LI  +PF     IWR LL AC +H NV++G L+A+ ++  +P+D A +VLLSNIYA 
Sbjct: 650 AMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYAT 709

Query: 660 ARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMK 708
           A +W+           K   KE G SWIE +     F AGD SH   + I   LE L+++
Sbjct: 710 AGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIR 769

Query: 709 SRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDC 768
            + AGY PD   VL DV E+ KE  L  HSE+LA+AF L   PP +PI+I+KNLR+C DC
Sbjct: 770 LKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNLRVCGDC 829

Query: 769 HTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           HT IK+ISKI  R+I++RD +RFHHF+ G CSCGD+W
Sbjct: 830 HTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 866



 Score =  245 bits (625), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 157/525 (29%), Positives = 269/525 (51%), Gaps = 45/525 (8%)

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           + +LFDE P++        +  ++ + Q  EA+ LF  L R G   +  + +  LKV   
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKV--- 101

Query: 170 MGWAELCPCVF----------ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF 219
                 C C+F           C+ K G   +  VGT+L+D +     VE   +VFD + 
Sbjct: 102 ------CGCLFDRIVGKQVHCQCI-KCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMR 154

Query: 220 ----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKS 263
                           N   E+AL  FSQM+  G KPN FTFA VL        +     
Sbjct: 155 VKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQ 214

Query: 264 AHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDL 323
            H   +K+  +  ++V  +++++Y+KS  +S+A+ +F+ M  ++ + W+ MIA +    L
Sbjct: 215 VHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGL 274

Query: 324 SIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNA 383
            ++A ELF RMR   V   Q  F +V++ CA ++ +    Q+H  V++ G   D+ +  A
Sbjct: 275 DLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTA 334

Query: 384 LMDVYAKCGRMENSVELFA-ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPA 442
           LM  Y+KC  ++++ +LF      +N V+W  +I GYVQ G   +AM +F +M  E V  
Sbjct: 335 LMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRP 394

Query: 443 TEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVF 502
              TYS++L A    AA+ P  Q+H L VK NY+    V  AL D Y+K G   +A  +F
Sbjct: 395 NHFTYSTILTAN---AAVSPS-QIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIF 450

Query: 503 DMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSN-GGLL 561
           +++++ + V+W+AM+SGY+  G     +K+F  + + G  PN  TF  VL+AC+     +
Sbjct: 451 ELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASV 510

Query: 562 EQGEAYFK-SMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
           EQG+ +   S+ + +    C+   +++V++  + G+++ A ++ +
Sbjct: 511 EQGKQFHSCSIKSGFSNALCVS--SALVTMYAKRGNIESANEVFK 553



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 132/423 (31%), Positives = 230/423 (54%), Gaps = 14/423 (3%)

Query: 209 EFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCA 268
           EF+R       ND  +EALN F  +R  G   +  + + VLK C  L    V K  H   
Sbjct: 66  EFSR-------NDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQC 118

Query: 269 LKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAV 328
           +K  +  D+ V  +L+D+Y K+  + +  R+F+EM  K+V+ W+ ++A Y Q  L+  A+
Sbjct: 119 IKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQAL 178

Query: 329 ELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVY 388
           +LF +M+   + PN FTF +VL   A    ++ G Q+H++V++ GL S +FV N+++++Y
Sbjct: 179 KLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMY 238

Query: 389 AKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYS 448
           +K   + ++  +F     RN V+WN+MI G+V  G   +A  +F +M  E V  T+  ++
Sbjct: 239 SKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFA 298

Query: 449 SVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND- 507
           +V++ CA++  +    Q+HC  +K   D D+ +  AL+  Y+KC  I DA  +F MM+  
Sbjct: 299 TVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGV 358

Query: 508 WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAY 567
            N VSW A+ISGY  +G +   + +F  M++ G RPN+ T+  +L+A      +   + +
Sbjct: 359 QNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTA---NAAVSPSQIH 415

Query: 568 FKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
              +  NY   P +   T++     + G  ++AAK+ E I  +  ++ W A+L       
Sbjct: 416 ALVVKTNYENSPSVG--TALSDSYSKIGDANEAAKIFELID-EKDIVAWSAMLSGYAQMG 472

Query: 628 NVE 630
           ++E
Sbjct: 473 DIE 475



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 183/339 (53%), Gaps = 6/339 (1%)

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
           +++++F+E P++ +   + ++  +++ D + +A+ LF  +R++    +  +   VL+ C 
Sbjct: 44  HSQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCG 103

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
            +    +G Q+H   ++ G + DV V  +L+D+Y K   +E+   +F E   +N V+W +
Sbjct: 104 CLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTS 163

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
           ++ GY Q G   +A+ +FS+M  E +     T+++VL   A+  A+E G+QVH + +K+ 
Sbjct: 164 LLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSG 223

Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
            D  + V N++++MY+K   ++DA+ VFD M + N VSWN+MI+G+  +GL  E  ++F 
Sbjct: 224 LDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFY 283

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
            M+  G +     F  V+  C+N   +   +     ++ N G +  +   T+++    + 
Sbjct: 284 RMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKN-GSDFDLNIKTALMVAYSKC 342

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGR 633
             +D A KL   +    +V+ W A     II   V+ GR
Sbjct: 343 SEIDDAFKLFCMMHGVQNVVSWTA-----IISGYVQNGR 376


>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
          Length = 890

 Score =  553 bits (1426), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 300/814 (36%), Positives = 444/814 (54%), Gaps = 63/814 (7%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           NS++Y   ++ C +    +    +H Q+ + G  +D++  N L+N Y K   +    ++F
Sbjct: 77  NSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVF 136

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             M  R+ +++ + I  Y  ++   +A   F  +     E N   F + LK   +    E
Sbjct: 137 RRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLE 196

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
               +   V   G +++  V TALI  +S CG +  A ++F  +                
Sbjct: 197 KAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANA 256

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            +    EA   + +M   G  PN  TF  +L +C   + +   +  H    +   E D+ 
Sbjct: 257 QHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVV 316

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDL----SIDAV-ELFCR 333
           VA AL+ +Y K   I +AR  F+ M K+DVI WS MIA YAQ+      S+D V +L  R
Sbjct: 317 VANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLER 376

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCG- 392
           MR+  V PN+ TF+S+L+AC+    L+ G QIH+ + +VG  SD  +  A+ ++YAKCG 
Sbjct: 377 MRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGS 436

Query: 393 ---------RMEN---------------------SVELFAESPKRNHVTWNTMIVGYVQL 422
                    +MEN                     + ++F+E   RN V+WN MI GY Q 
Sbjct: 437 IYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQS 496

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
           G++ K   + S M  E      VT  S+L AC +L+ALE G  VH   VK   + D VVA
Sbjct: 497 GDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVA 556

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
            +LI MY+KCG +T+AR VFD +++ + V+WNAM++GY  HG+  E + +F  M +    
Sbjct: 557 TSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVP 616

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           PN +TF  V+SAC   GL+++G   F+ M  ++ ++P  +HY  MV LLGRAG L +A +
Sbjct: 617 PNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEE 676

Query: 603 LIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARS 662
            I+ +P +P + +W ALLGAC  H+NV++   +A HIL  EP + + +V LSNIYA A  
Sbjct: 677 FIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGR 736

Query: 663 W-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRK 711
           W           +K   K+ G S IE  G +H F A D +H +++ I   LE L  + ++
Sbjct: 737 WDDSTKVRKVMDDKGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDSIHAELEMLTKEMKE 796

Query: 712 AGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTA 771
           AGY PD+  VL DV E +KER L  HSEKLA+A+ L K PP +PIRI+KNLR+C DCHTA
Sbjct: 797 AGYTPDMRFVLHDVDEVQKERALCHHSEKLAIAYGLLKTPPGTPIRIMKNLRVCGDCHTA 856

Query: 772 IKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            K ISKI +REI+ RD +RFH+F++G CSCGDFW
Sbjct: 857 TKFISKIRKREIVARDANRFHYFKNGTCSCGDFW 890



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/526 (24%), Positives = 238/526 (45%), Gaps = 56/526 (10%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N  ++ + L++C     L+ A  IH  V   G   D+     L+ +Y K   +  A +
Sbjct: 176 EPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACE 235

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +F +M ERN +S+   IQ      +  EA  L+  + + G   N   F + L    +   
Sbjct: 236 IFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEA 295

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------------- 219
                 + + + + G +++  V  ALI  +  C C++ AR+ FD +              
Sbjct: 296 LNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAG 355

Query: 220 --------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT 271
                    +  +E      +MR  G  PN  TF  +LKAC     +   +  H    K 
Sbjct: 356 YAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKV 415

Query: 272 CYEMDLYVAVA-------------------------------LLDLYTKSGEISNARRIF 300
            +E D  +  A                               LL +Y K G++++A ++F
Sbjct: 416 GFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVF 475

Query: 301 EEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLD 360
            EM  ++V+ W+ MIA YAQ+       EL   M+     P++ T +S+L+AC  +  L+
Sbjct: 476 SEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALE 535

Query: 361 LGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYV 420
            G  +H+  V++GL SD  V+ +L+ +Y+KCG +  +  +F +   R+ V WN M+ GY 
Sbjct: 536 RGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYG 595

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV 480
           Q G   +A+ +F +ML+E+VP  E+T+++V+ AC     ++ G ++  + ++ ++ M   
Sbjct: 596 QHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRI-MQEDFRMKPG 654

Query: 481 VAN--ALIDMYAKCGSITDARLVFDMMNDWNEVS-WNAMISGYSMH 523
             +   ++D+  + G + +A      M    ++S W+A++     H
Sbjct: 655 KQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSH 700



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 204/417 (48%), Gaps = 53/417 (12%)

Query: 326 DAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALM 385
           +A++L   ++Q  +  N  T+  +++ CA +   + G  +H  +  +GL  D+++ N+L+
Sbjct: 61  EAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLI 120

Query: 386 DVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEV 445
           + Y+K G + +  ++F     R+ VTW++MI  Y       KA   F +M +  +    +
Sbjct: 121 NFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRI 180

Query: 446 TYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMM 505
           T+ S+L+AC + + LE   ++H +   +  + DV VA ALI MY+KCG I+ A  +F  M
Sbjct: 181 TFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKM 240

Query: 506 NDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE 565
            + N VSW A+I   + H    E  ++++ M Q G  PN +TFV +L++C+    L +G 
Sbjct: 241 KERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGR 300

Query: 566 AYFKSMVANYGIEP----------------CIEH---------------YTSMVSLLGRA 594
               S ++  G+E                 CI+                +++M++   ++
Sbjct: 301 -RIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQS 359

Query: 595 GHLDKAA-----KLIEGIPFQ---PSVMIWRALLGACIIHNNVEIGRLSAQHI--LDFEP 644
           G+ DK +     +L+E +  +   P+ + + ++L AC +H  +E GR     I  + FE 
Sbjct: 360 GYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFES 419

Query: 645 EDEATHVLLSNIYAMARSWEKAASKEPGLSWIENQGMVH-------YFRAGDTSHAD 694
            D +    + N+YA   S  +A   E   S +EN+ +V        Y + GD + A+
Sbjct: 420 -DRSLQTAIFNMYAKCGSIYEA---EQVFSKMENKNVVAWASLLTMYIKCGDLTSAE 472



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 105/209 (50%), Gaps = 2/209 (0%)

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV 480
           + G + +A+ +   + +  +     TY  ++  CA L   E G  VH    +    +D+ 
Sbjct: 55  KAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIY 114

Query: 481 VANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG 540
           + N+LI+ Y+K G +     VF  M   + V+W++MI+ Y+ +   A+    F+ M+   
Sbjct: 115 LGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDAN 174

Query: 541 WRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKA 600
             PN +TF+ +L AC+N  +LE+      ++V   G+E  +   T+++++  + G +  A
Sbjct: 175 IEPNRITFLSILKACNNYSMLEKARE-IHTVVKASGMETDVAVATALITMYSKCGEISLA 233

Query: 601 AKLIEGIPFQPSVMIWRALLGACIIHNNV 629
            ++ + +  + +V+ W A++ A   H  +
Sbjct: 234 CEIFQKMK-ERNVVSWTAIIQANAQHRKL 261


>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
 gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
          Length = 920

 Score =  553 bits (1424), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 283/774 (36%), Positives = 436/774 (56%), Gaps = 29/774 (3%)

Query: 60  ATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPE 119
           ++ L +C +         IH QV K+  C + F  N L+ +Y+       A ++F +M  
Sbjct: 148 SSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLF 207

Query: 120 RNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCV 179
            + ++F T I G+        A+ +F  +   G   +     + L    S+G  +    +
Sbjct: 208 CDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQL 267

Query: 180 FACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-----------------GLFNDC 222
            + + K G   +     +L+D +  CG +E A  +F+                 G  +D 
Sbjct: 268 HSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISD- 326

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
             ++   F QM+A G  PN FT+  +L+ C     I + +  H  ++K  +E D+YV+  
Sbjct: 327 LAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGV 386

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+D+Y+K G +  AR+I E + K+DV+ W+ MIA Y Q D   +A+  F  M+   V P+
Sbjct: 387 LIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPD 446

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
                S   ACA ++ +  G QIH+ V   G  +D+ + N L+++YA+CGR E +  LF 
Sbjct: 447 NIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFR 506

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
           E   ++ +TWN +I G+ Q     +A+++F KM +        T+ S + A A+LA ++ 
Sbjct: 507 EIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQ 566

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G QVH   VK  +  +  VANALI +Y KCGSI DA+++F  M+  NEVSWN +I+  S 
Sbjct: 567 GKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQ 626

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
           HG   E L +FD M+Q G +PN++TF+GVL+ACS+ GL+E+G +YFKSM   YG+ P  +
Sbjct: 627 HGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPD 686

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDF 642
           HY  +V +LGRAG LD+A + ++ +P   + MIWR LL AC +H N+EIG L+A+H+L+ 
Sbjct: 687 HYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLEL 746

Query: 643 EPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTS 691
           EP D A++VLLSN YA+   W           ++   KEPG SWIE +  VH F  GD  
Sbjct: 747 EPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRL 806

Query: 692 HADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMP 751
           H   + I   L  LN +  K GY  +   +  +  +++K+   +VHSEKLA+AF L  +P
Sbjct: 807 HPLSDQIYKFLSELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLP 866

Query: 752 PSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           P  P+R+IKNLR+C DCH+ +K  S++ +REI++RDV+RFHHF  G CSCGD+W
Sbjct: 867 PCIPLRVIKNLRVCDDCHSWMKCTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920



 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 171/583 (29%), Positives = 284/583 (48%), Gaps = 19/583 (3%)

Query: 62  SLQSCI-QNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPER 120
           +LQ+C  + +     + IH   + +G   D    N+L+++Y K   +  A ++F E+  R
Sbjct: 48  ALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSR 107

Query: 121 NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVF 180
           + +S+V  + GY  S    EA  L+S +H       P+  ++ L              + 
Sbjct: 108 DHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIH 167

Query: 181 ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF-DGLFNDCF---------------E 224
           A VYK    S  FVG ALI  +   G  + A +VF D LF D                 E
Sbjct: 168 AQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGE 227

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
            AL  F +M+  G +P+  T A +L AC  +  ++  K  H   LK     D     +LL
Sbjct: 228 CALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLL 287

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
           DLY K G+I  A  IF    + +V+ W+ M+  Y Q      + E+F +M+   + PNQF
Sbjct: 288 DLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQF 347

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           T+  +L+ C     ++LG QIHSL ++ G  SD++VS  L+D+Y+K G ++ + ++    
Sbjct: 348 TYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEML 407

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
            KR+ V+W +MI GYVQ     +A+  F +M +  V    +  +S   ACA + A+  G+
Sbjct: 408 EKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGL 467

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
           Q+H     + Y  D+ + N L+++YA+CG   +A  +F  +   +E++WN +ISG+    
Sbjct: 468 QIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSR 527

Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY 584
           L  + L VF  M Q G + N  TF+  +SA +N   ++QG+      V   G     E  
Sbjct: 528 LYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKT-GHTSETEVA 586

Query: 585 TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
            +++SL G+ G ++ A  +   +  +  V  W  ++ +C  H 
Sbjct: 587 NALISLYGKCGSIEDAKMIFSEMSLRNEVS-WNTIITSCSQHG 628



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 109/427 (25%), Positives = 192/427 (44%), Gaps = 51/427 (11%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +Y   L++C     ++    IH   +K G   D++ + VL+++Y K   L  A K+ 
Sbjct: 345 NQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKIL 404

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           + + +R+ +S+ + I GY       EA+  F  +   G   +     +       +    
Sbjct: 405 EMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMR 464

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF-----------DGLFND-- 221
               + A VY  G+ ++  +   L++ ++ CG  E A  +F           +GL +   
Sbjct: 465 QGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFG 524

Query: 222 ---CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
               +++AL  F +M   G K N FTF   + A   L  I+  K  HG A+KT +  +  
Sbjct: 525 QSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETE 584

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           VA AL+ LY K G I +A+ IF EM  ++ + W+ +I   +Q    ++A++LF +M+Q  
Sbjct: 585 VANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEG 644

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL-----LSDVFVSNALMDVYA---- 389
           + PN  TF+ VL AC+           H  +V  GL     +S+V+  N + D YA    
Sbjct: 645 LKPNDVTFIGVLAACS-----------HVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVD 693

Query: 390 ---KCGRMENSVELFAESP-KRNHVTWNTMIVG-----YVQLGEVGKAMIMFSKMLEEQV 440
              + G+++ +     E P   N + W T++        +++GE+       +K L E  
Sbjct: 694 ILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELA------AKHLLELE 747

Query: 441 PATEVTY 447
           P    +Y
Sbjct: 748 PHDSASY 754



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 77/168 (45%), Gaps = 5/168 (2%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           +++N  ++ +++ +     D++    +H + +K G+  +    N L+++Y K   + DA 
Sbjct: 544 AKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAK 603

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
            +F EM  RN +S+ T I   +   + +EA+ LF  + +EG + N   F   L     +G
Sbjct: 604 MIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVG 663

Query: 172 WAELCPCVFAC---VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD 216
             E     F     VY L    + +    ++D     G ++ AR+  D
Sbjct: 664 LVEEGLSYFKSMSNVYGLNPIPDHY--ACVVDILGRAGQLDRARRFVD 709


>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
          Length = 920

 Score =  552 bits (1422), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 289/808 (35%), Positives = 445/808 (55%), Gaps = 37/808 (4%)

Query: 26  RGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKK 85
           RGL  +A     Q   +   P  + +S        + L +C +         IH QV K+
Sbjct: 122 RGLGKEAFRLYSQMHWTAVIPTPYVLS--------SVLSACTKGKLFAQGRMIHAQVYKQ 173

Query: 86  GNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLF 145
             C + F  N L+ +Y+       A ++F +M   + ++F T I G+        A+ +F
Sbjct: 174 AFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIF 233

Query: 146 STLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVC 205
             +   G   +     + L    S+G  +    + + + K G   +     +L+D +  C
Sbjct: 234 DEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKC 293

Query: 206 GCVEFARKVFD-----------------GLFNDCFEEALNFFSQMRAVGFKPNNFTFAFV 248
           G +E A  +F+                 G  +D   ++   F QM+A G  PN FT+  +
Sbjct: 294 GDIETAHDIFNLGDRTNVVLWNLMLVAYGQISD-LAKSFEIFGQMQATGIHPNKFTYPCI 352

Query: 249 LKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDV 308
           L+ C     I + +  H  ++K  +E D+YV+  L+D+Y+K   +  AR+I E + K+DV
Sbjct: 353 LRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDV 412

Query: 309 IPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSL 368
           + W+ MIA Y Q D   +A+  F  M+   V P+     S   ACA ++ +  G QIH+ 
Sbjct: 413 VSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHAR 472

Query: 369 VVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKA 428
           V   G  +D+ + N L+++YA+CGR E +  LF E   ++ +TWN +I G+ Q     +A
Sbjct: 473 VYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQA 532

Query: 429 MIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDM 488
           +++F KM +        T+ S + A A+LA ++ G QVH   VK  +  +  VANALI +
Sbjct: 533 LMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISL 592

Query: 489 YAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTF 548
           Y KCGSI DA+++F  M+  NEVSWN +I+  S HG   E L +FD M+Q G +PN++TF
Sbjct: 593 YGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTF 652

Query: 549 VGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIP 608
           +GVL+ACS+ GL+E+G +YFKSM   YG+ P  +HY  +V +LGRAG LD+A + ++ +P
Sbjct: 653 IGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMP 712

Query: 609 FQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW----- 663
              + MIWR LL AC +H N+EIG L+A+H+L+ EP D A++VLLSN YA+   W     
Sbjct: 713 ITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQ 772

Query: 664 ------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPD 717
                 ++   KEPG SWIE +  VH F  GD  H   + I   L  LN +  K GY  +
Sbjct: 773 VRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQE 832

Query: 718 LSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISK 777
              +  +  +++K+   +VHSEKLA+AF L  +PP  P+R+IKNLR+C DCH+ +K  S+
Sbjct: 833 NPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNLRVCDDCHSWMKFTSE 892

Query: 778 IVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           + +REI++RDV+RFHHF  G CSCGD+W
Sbjct: 893 VTRREIVLRDVYRFHHFNSGSCSCGDYW 920



 Score =  266 bits (680), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 168/583 (28%), Positives = 283/583 (48%), Gaps = 19/583 (3%)

Query: 62  SLQSCI-QNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPER 120
           +LQ+C  + +     + IH   + +G   D    N+L+++Y K   +  A ++F E+  R
Sbjct: 48  ALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSR 107

Query: 121 NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVF 180
           + +S+V  + GY       EA  L+S +H       P+  ++ L              + 
Sbjct: 108 DHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIH 167

Query: 181 ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF-DGLFNDCF---------------E 224
           A VYK    S  FVG ALI  +   G  + A +VF D LF D                 E
Sbjct: 168 AQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGE 227

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
            AL  F +M+  G +P+  T A +L AC  +  ++  K  H   LK     D     +LL
Sbjct: 228 CALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLL 287

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
           DLY K G+I  A  IF    + +V+ W+ M+  Y Q      + E+F +M+   + PN+F
Sbjct: 288 DLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKF 347

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           T+  +L+ C     ++LG QIHSL ++ G  SD++VS  L+D+Y+K   ++ + ++    
Sbjct: 348 TYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEML 407

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
            KR+ V+W +MI GYVQ     +A+  F +M +  V    +  +S   ACA + A+  G+
Sbjct: 408 EKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGL 467

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
           Q+H     + Y  D+ + N L+++YA+CG   +A  +F  ++  +E++WN +ISG+    
Sbjct: 468 QIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSR 527

Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY 584
           L  + L VF  M Q G + N  TF+  +SA +N   ++QG+      V   G     E  
Sbjct: 528 LYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKT-GHTSETEVA 586

Query: 585 TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
            +++SL G+ G ++ A  +   +  +  V  W  ++ +C  H 
Sbjct: 587 NALISLYGKCGSIEDAKMIFSEMSLRNEVS-WNTIITSCSQHG 628



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/355 (30%), Positives = 181/355 (50%), Gaps = 2/355 (0%)

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
           D  +   L+DLY K+G +  AR++F+E+  +D + W  M++ YAQ  L  +A  L+ +M 
Sbjct: 77  DRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMH 136

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
              V P  +   SVL AC   +    G  IH+ V +    S+ FV NAL+ +Y   G  +
Sbjct: 137 WTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFK 196

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
            +  +F +    + VT+NT+I G+ Q G    A+ +F +M    +    VT +S+L ACA
Sbjct: 197 LAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACA 256

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
           S+  L+ G Q+H   +KA    D +   +L+D+Y KCG I  A  +F++ +  N V WN 
Sbjct: 257 SVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNL 316

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           M+  Y      A+  ++F  MQ  G  PN  T+  +L  C+  G +E GE      + N 
Sbjct: 317 MLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKN- 375

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
           G E  +     ++ +  +   LDKA K++E +  +  V+ W +++   + H+  E
Sbjct: 376 GFESDMYVSGVLIDMYSKYRCLDKARKILEMLE-KRDVVSWTSMIAGYVQHDFCE 429


>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
 gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
          Length = 1024

 Score =  548 bits (1412), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 276/777 (35%), Positives = 440/777 (56%), Gaps = 29/777 (3%)

Query: 57   HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
            +++++ L +C + + L+    +H  VLK G   D +  N L+++Y  L  L  A  +F  
Sbjct: 249  YAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSN 308

Query: 117  MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
            M +R+ +++ T I G +      +A+ LF  +H +G E +     + +    + G     
Sbjct: 309  MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG 368

Query: 177  PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF-----------------DGLF 219
              + A   KLG  SN  +  AL++ ++ C  +E A   F                  GL 
Sbjct: 369  QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLL 428

Query: 220  NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
            +D    +   F QM+     PN +T+  +LK C+ L  + + +  H   +KT ++++ YV
Sbjct: 429  DD-LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV 487

Query: 280  AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
               L+D+Y K G++  A  I      KDV+ W+ MIA Y Q +    A+  F +M    +
Sbjct: 488  CSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 547

Query: 340  APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
              ++    + + ACA ++ L  G QIH+     G  SD+   NAL+ +Y++CG++E S  
Sbjct: 548  RSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYL 607

Query: 400  LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
             F ++   +++ WN ++ G+ Q G   +A+ +F +M  E +     T+ S ++A +  A 
Sbjct: 608  AFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETAN 667

Query: 460  LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
            ++ G QVH +  K  YD +  V NALI MYAKCGSI+DA   F  ++  NEVSWNA+I+ 
Sbjct: 668  MKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINA 727

Query: 520  YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
            YS HG  +E L  FD M     RPN++T VGVLSACS+ GL+++G AYF+SM + YG+ P
Sbjct: 728  YSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSP 787

Query: 580  CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHI 639
              EHY  +V +L RAG L +A + I+ +P +P  ++WR LL AC++H N+EIG  +A H+
Sbjct: 788  KPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHL 847

Query: 640  LDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAG 688
            L+ EPED AT+VLLSN+YA+++ W           EK   KEPG SWIE +  +H F  G
Sbjct: 848  LELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVG 907

Query: 689  DTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALF 748
            D +H   + I    + L  ++ + GY+ D  ++L +++ ++K+  +++HSEKLA++F L 
Sbjct: 908  DQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLL 967

Query: 749  KMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
             +P + PI ++KNLR+C DCH  IK +SK+  REII+RD +RFHHF+ G CSC D+W
Sbjct: 968  SLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1024



 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 166/578 (28%), Positives = 276/578 (47%), Gaps = 20/578 (3%)

Query: 63  LQSCIQ-NDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERN 121
           L+ C++ N  L     +H Q+LK G   +   +  L + Y+    L  A K+FDEMPER 
Sbjct: 51  LEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERT 110

Query: 122 TISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA-ELCPCVF 180
             ++   I+     +   E  GLF  +  E    N   F+  L+       A ++   + 
Sbjct: 111 IFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIH 170

Query: 181 ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFE 224
           A +   G   +  V   LID +S  G V+ AR+VFDGL                 N+C  
Sbjct: 171 ARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEA 230

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           EA+  F  M  +G  P  + F+ VL AC  ++++ + +  HG  LK  +  D YV  AL+
Sbjct: 231 EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALV 290

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
            LY   G + +A  IF  M ++D + ++ +I   +Q      A+ELF RM    + P+  
Sbjct: 291 SLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSN 350

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           T  S++ AC+    L  G Q+H+   ++G  S+  +  AL+++YAKC  +E +++ F E+
Sbjct: 351 TLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLET 410

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
              N V WN M+V Y  L ++  +  +F +M  E++   + TY S+L+ C  L  LE G 
Sbjct: 411 EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 470

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
           Q+H   +K N+ ++  V + LIDMYAK G +  A  +       + VSW  MI+GY+ + 
Sbjct: 471 QIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN 530

Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY 584
              + L  F  M  RG R + +     +SAC+    L++G+        + G    +   
Sbjct: 531 FDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS-GFSSDLPFQ 589

Query: 585 TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
            ++V+L  R G ++++    E      ++  W AL+  
Sbjct: 590 NALVTLYSRCGKIEESYLAFEQTEAGDNIA-WNALVSG 626



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 172/331 (51%), Gaps = 2/331 (0%)

Query: 237 GFKPNNFTFAFVLKACLGLD-TIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISN 295
           G +PN+ T  ++L+ CL  + ++   +  H   LK   + +  ++  L D Y   G++  
Sbjct: 39  GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 98

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC-A 354
           A ++F+EMP++ +  W+ MI   A  +L  +   LF RM    V PN+ TF  VL+AC  
Sbjct: 99  AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 158

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
                D+  QIH+ ++  GL     V N L+D+Y++ G ++ +  +F     ++H +W  
Sbjct: 159 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 218

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
           MI G  +     +A+ +F  M    +  T   +SSVL AC  + +LE G Q+H L +K  
Sbjct: 219 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 278

Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
           +  D  V NAL+ +Y   G++  A  +F  M+  + V++N +I+G S  G   + +++F 
Sbjct: 279 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK 338

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGE 565
            M   G  P++ T   ++ ACS  G L +G+
Sbjct: 339 RMHLDGLEPDSNTLASLVVACSADGTLFRGQ 369



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 118/490 (24%), Positives = 226/490 (46%), Gaps = 20/490 (4%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E +S++ A+ + +C  +  L     +H    K G   +      LLN+Y K   +  A  
Sbjct: 346 EPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALD 405

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
            F E    N + +   +  Y +      +  +F  +  E    N + + + LK  + +G 
Sbjct: 406 YFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGD 465

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCG--------CVEFARK-------VFDG 217
            EL   + + + K     NA+V + LID ++  G         + FA K       +  G
Sbjct: 466 LELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAG 525

Query: 218 LFNDCFEE-ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
                F++ AL  F QM   G + +       + AC GL  ++  +  H  A  + +  D
Sbjct: 526 YTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSD 585

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           L    AL+ LY++ G+I  +   FE+    D I W+ +++ + Q+  + +A+ +F RM +
Sbjct: 586 LPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNR 645

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             +  N FTF S ++A +    +  G Q+H+++ + G  S+  V NAL+ +YAKCG + +
Sbjct: 646 EGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISD 705

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           + + F E   +N V+WN +I  Y + G   +A+  F +M+   V    VT   VL AC+ 
Sbjct: 706 AEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSH 765

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDAR-LVFDMMNDWNEVSW 513
           +  ++ G+  +  ++ + Y +     +   ++DM  + G ++ A+  + +M    + + W
Sbjct: 766 IGLVDKGI-AYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVW 824

Query: 514 NAMISGYSMH 523
             ++S   +H
Sbjct: 825 RTLLSACVVH 834



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 188/419 (44%), Gaps = 26/419 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N ++Y + L++CI+  DL+    IH Q++K    L+ +  +VL+++Y KL +L  A  + 
Sbjct: 449 NQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL 508

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
                ++ +S+ T I GYT  +   +A+  F  +   G   +    T  +     +   +
Sbjct: 509 IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALK 568

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF------DGLFNDCF----- 223
               + A     G  S+     AL+  +S CG +E +   F      D +  +       
Sbjct: 569 EGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQ 628

Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                EEAL  F +M   G   NNFTF   +KA      ++  K  H    KT Y+ +  
Sbjct: 629 QSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETE 688

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V  AL+ +Y K G IS+A + F E+  K+ + W+ +I  Y++     +A++ F +M  + 
Sbjct: 689 VCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSN 748

Query: 339 VAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
           V PN  T V VL AC+ +  +D G     S+    GL         ++D+  + G +  +
Sbjct: 749 VRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRA 808

Query: 398 VELFAESP-KRNHVTWNTMIVGYV-----QLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
            E   E P K + + W T++   V     ++GE     ++    LE +  AT V  S++
Sbjct: 809 KEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLL---ELEPEDSATYVLLSNL 864


>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
 gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
          Length = 989

 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 280/774 (36%), Positives = 440/774 (56%), Gaps = 27/774 (3%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           +++ L  C +         +H  V K G+ L+ +  N L+ +Y ++     A K+F +M 
Sbjct: 216 FSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQ 275

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
            ++ +SF + I G         A+ LF+ + R+  + +     + L    S G       
Sbjct: 276 SKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQ 335

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG-------LFN---------DC 222
           + + V K G  S+  V  AL+D +  C  ++ A ++F         L+N         D 
Sbjct: 336 LHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDN 395

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
             E+   F QM+  G  PN FT+  +L+ C  +  + + +  H   +KT ++ ++YV   
Sbjct: 396 LSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSV 455

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+D+Y K G++  A  I   + + DV+ W+ +I+ YAQ +L  +A++ F  M    +  +
Sbjct: 456 LIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSD 515

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
              F S + ACA ++ L+ G QIH+     G   D+ + NAL+ +YA+CGR++ +   F 
Sbjct: 516 NIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFE 575

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
           +   ++ ++WN +I G+ Q G    A+ +F++M   ++ A+  T+ S + A A++A ++ 
Sbjct: 576 KIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQ 635

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G Q+H + +K  +D D+ V+NALI  YAKCGSI DAR  F  M + N+VSWNAMI+GYS 
Sbjct: 636 GKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQ 695

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
           HG   E + +F+ M+Q G  PN++TFVGVLSACS+ GL+ +G  YF+SM   +G+ P   
Sbjct: 696 HGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPA 755

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDF 642
           HY  +V L+ RAG L +A K IE +P +P   IWR LL AC +H NVE+G  +AQH+L+ 
Sbjct: 756 HYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLEL 815

Query: 643 EPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTS 691
           EPED AT+VLLSN+YA++  W+           +   KEPG SWIE +  VH F  GD  
Sbjct: 816 EPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDRL 875

Query: 692 HADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMP 751
           H   + I   L  LN K+ + GY  D  ++L DV +++K+  +++HSEKLA+ F L  + 
Sbjct: 876 HPLADKIYEFLAELNKKAAEIGYFQDRYSLLNDVEQEQKDPTVYIHSEKLAITFGLLSLS 935

Query: 752 PSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            + PI ++KNLR+C DCH+ IK +SKI  R II+RD +RFHHF+ G CSC D+W
Sbjct: 936 DTVPIHVMKNLRVCKDCHSWIKFVSKISNRAIIVRDAYRFHHFEGGICSCKDYW 989



 Score =  279 bits (714), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 176/589 (29%), Positives = 291/589 (49%), Gaps = 27/589 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +Y   L  C+ +  L     +H ++LK G   +    N L++VY  L  L    K+F
Sbjct: 9   NCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVF 68

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVL----VSM 170
           ++MP R+  S+   I G+         + LFS +  E       +F + L+      + +
Sbjct: 69  EDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGI 128

Query: 171 GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------- 219
            +AE       C    G   +  +   LI  ++  G +  ARKVFD L            
Sbjct: 129 RYAEQIHARIIC---HGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMI 185

Query: 220 -----NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
                N   EEA++ F +M   G  P  + F+ VL  C  +    V +  H    K    
Sbjct: 186 SGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSS 245

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
           ++ YV  AL+ LY++     +A ++F +M  KD + ++ +I+  AQ   S  A+ELF +M
Sbjct: 246 LETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKM 305

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
           ++ ++ P+  T  S+L ACA+   L  G Q+HS V++ G+ SD+ V  AL+D+Y  C  +
Sbjct: 306 KRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDI 365

Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
           + + E+F  +   N V WN M+V + +L  + ++  +F +M  + +   + TY S+LR C
Sbjct: 366 KTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTC 425

Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
            S+ AL+ G Q+H   +K  +  +V V + LIDMYAK G +  A ++   + + + VSW 
Sbjct: 426 TSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWT 485

Query: 515 AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG-EAYFKSMVA 573
           A+ISGY+ H L AE LK F  M  RG + +N+ F   +SAC+    L QG + + +S V+
Sbjct: 486 ALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVS 545

Query: 574 NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
            Y  +  I +  ++VSL  R G + +A    E I  + S+  W  L+  
Sbjct: 546 GYSEDLSIGN--ALVSLYARCGRIKEAYLEFEKIDAKDSIS-WNGLISG 591



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 183/346 (52%), Gaps = 2/346 (0%)

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           M   G   N  T+ ++L  CL   ++   K  HG  LK  +  +  +   L+D+Y   G+
Sbjct: 1   MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           +    ++FE+MP + V  W  +I+ + +  +S   ++LF  M +  V+P + +F SVL+A
Sbjct: 61  LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA 120

Query: 353 CATME-GLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
           C+    G+    QIH+ ++  GLL    +SN L+ +YAK G + ++ ++F     ++ V+
Sbjct: 121 CSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVS 180

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
           W  MI G+ Q G   +A+ +F +M    +  T   +SSVL  C  +   + G Q+H L  
Sbjct: 181 WVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVF 240

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
           K    ++  V NAL+ +Y++  +   A  VF  M   +EVS+N++ISG +  G S   L+
Sbjct: 241 KYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALE 300

Query: 532 VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
           +F  M++   +P+ +T   +LSAC++ G L +GE    S V   GI
Sbjct: 301 LFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQ-LHSYVIKAGI 345



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 144/283 (50%), Gaps = 6/283 (2%)

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           M    +  N  T++ +L  C     L    ++H  ++++G  ++  + N L+DVY   G 
Sbjct: 1   MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           ++  V++F + P R+  +W+ +I G+++     + + +FS M+EE V  TE++++SVLRA
Sbjct: 61  LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA 120

Query: 454 CAS-LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS 512
           C+     +    Q+H   +        +++N LI +YAK G I  AR VFD +   + VS
Sbjct: 121 CSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVS 180

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
           W AMISG+S +G   E + +F  M   G  P    F  VLS C+   L + GE    ++V
Sbjct: 181 WVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQ-LHALV 239

Query: 573 ANYGIEPCIEHY--TSMVSLLGRAGHLDKAAKLIEGIPFQPSV 613
             YG    +E Y   ++V+L  R  +   A K+   +  +  V
Sbjct: 240 FKYG--SSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEV 280



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 55/114 (48%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           ++ +++ +     +++    IH  ++K+G   D+  +N L+  Y K   + DA + F EM
Sbjct: 619 TFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEM 678

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
           PE+N +S+   I GY+      EAV LF  + + G   N   F   L     +G
Sbjct: 679 PEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVG 732


>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
 gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1064

 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 276/777 (35%), Positives = 440/777 (56%), Gaps = 29/777 (3%)

Query: 57   HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
            +++++ L +C + + L+    +H  VLK G   D +  N L+++Y  L  L  A  +F  
Sbjct: 289  YAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSN 348

Query: 117  MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
            M +R+ +++ T I G +      +A+ LF  +H +G E +     + +    + G     
Sbjct: 349  MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG 408

Query: 177  PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF-----------------DGLF 219
              + A   KLG  SN  +  AL++ ++ C  +E A   F                  GL 
Sbjct: 409  QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLL 468

Query: 220  NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
            +D    +   F QM+     PN +T+  +LK C+ L  + + +  H   +KT ++++ YV
Sbjct: 469  DD-LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV 527

Query: 280  AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
               L+D+Y K G++  A  I      KDV+ W+ MIA Y Q +    A+  F +M    +
Sbjct: 528  CSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 587

Query: 340  APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
              ++    + + ACA ++ L  G QIH+     G  SD+   NAL+ +Y++CG++E S  
Sbjct: 588  RSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYL 647

Query: 400  LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
             F ++   +++ WN ++ G+ Q G   +A+ +F +M  E +     T+ S ++A +  A 
Sbjct: 648  AFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETAN 707

Query: 460  LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
            ++ G QVH +  K  YD +  V NALI MYAKCGSI+DA   F  ++  NEVSWNA+I+ 
Sbjct: 708  MKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINA 767

Query: 520  YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
            YS HG  +E L  FD M     RPN++T VGVLSACS+ GL+++G AYF+SM + YG+ P
Sbjct: 768  YSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSP 827

Query: 580  CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHI 639
              EHY  +V +L RAG L +A + I+ +P +P  ++WR LL AC++H N+EIG  +A H+
Sbjct: 828  KPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHL 887

Query: 640  LDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAG 688
            L+ EPED AT+VLLSN+YA+++ W           EK   KEPG SWIE +  +H F  G
Sbjct: 888  LELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVG 947

Query: 689  DTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALF 748
            D +H   + I    + L  ++ + GY+ D  ++L +++ ++K+  +++HSEKLA++F L 
Sbjct: 948  DQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLL 1007

Query: 749  KMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
             +P + PI ++KNLR+C DCH  IK +SK+  REII+RD +RFHHF+ G CSC D+W
Sbjct: 1008 SLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 166/578 (28%), Positives = 276/578 (47%), Gaps = 20/578 (3%)

Query: 63  LQSCIQ-NDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERN 121
           L+ C++ N  L     +H Q+LK G   +   +  L + Y+    L  A K+FDEMPER 
Sbjct: 91  LEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERT 150

Query: 122 TISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA-ELCPCVF 180
             ++   I+     +   E  GLF  +  E    N   F+  L+       A ++   + 
Sbjct: 151 IFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIH 210

Query: 181 ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFE 224
           A +   G   +  V   LID +S  G V+ AR+VFDGL                 N+C  
Sbjct: 211 ARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEA 270

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           EA+  F  M  +G  P  + F+ VL AC  ++++ + +  HG  LK  +  D YV  AL+
Sbjct: 271 EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALV 330

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
            LY   G + +A  IF  M ++D + ++ +I   +Q      A+ELF RM    + P+  
Sbjct: 331 SLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSN 390

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           T  S++ AC+    L  G Q+H+   ++G  S+  +  AL+++YAKC  +E +++ F E+
Sbjct: 391 TLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLET 450

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
              N V WN M+V Y  L ++  +  +F +M  E++   + TY S+L+ C  L  LE G 
Sbjct: 451 EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 510

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
           Q+H   +K N+ ++  V + LIDMYAK G +  A  +       + VSW  MI+GY+ + 
Sbjct: 511 QIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN 570

Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY 584
              + L  F  M  RG R + +     +SAC+    L++G+        + G    +   
Sbjct: 571 FDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS-GFSSDLPFQ 629

Query: 585 TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
            ++V+L  R G ++++    E      ++  W AL+  
Sbjct: 630 NALVTLYSRCGKIEESYLAFEQTEAGDNIA-WNALVSG 666



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 172/331 (51%), Gaps = 2/331 (0%)

Query: 237 GFKPNNFTFAFVLKACLGLD-TIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISN 295
           G +PN+ T  ++L+ CL  + ++   +  H   LK   + +  ++  L D Y   G++  
Sbjct: 79  GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC-A 354
           A ++F+EMP++ +  W+ MI   A  +L  +   LF RM    V PN+ TF  VL+AC  
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
                D+  QIH+ ++  GL     V N L+D+Y++ G ++ +  +F     ++H +W  
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
           MI G  +     +A+ +F  M    +  T   +SSVL AC  + +LE G Q+H L +K  
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 318

Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
           +  D  V NAL+ +Y   G++  A  +F  M+  + V++N +I+G S  G   + +++F 
Sbjct: 319 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK 378

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGE 565
            M   G  P++ T   ++ ACS  G L +G+
Sbjct: 379 RMHLDGLEPDSNTLASLVVACSADGTLFRGQ 409



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 118/490 (24%), Positives = 226/490 (46%), Gaps = 20/490 (4%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E +S++ A+ + +C  +  L     +H    K G   +      LLN+Y K   +  A  
Sbjct: 386 EPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALD 445

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
            F E    N + +   +  Y +      +  +F  +  E    N + + + LK  + +G 
Sbjct: 446 YFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGD 505

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCG--------CVEFARK-------VFDG 217
            EL   + + + K     NA+V + LID ++  G         + FA K       +  G
Sbjct: 506 LELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAG 565

Query: 218 LFNDCFEE-ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
                F++ AL  F QM   G + +       + AC GL  ++  +  H  A  + +  D
Sbjct: 566 YTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSD 625

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           L    AL+ LY++ G+I  +   FE+    D I W+ +++ + Q+  + +A+ +F RM +
Sbjct: 626 LPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNR 685

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             +  N FTF S ++A +    +  G Q+H+++ + G  S+  V NAL+ +YAKCG + +
Sbjct: 686 EGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISD 745

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           + + F E   +N V+WN +I  Y + G   +A+  F +M+   V    VT   VL AC+ 
Sbjct: 746 AEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSH 805

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDAR-LVFDMMNDWNEVSW 513
           +  ++ G+  +  ++ + Y +     +   ++DM  + G ++ A+  + +M    + + W
Sbjct: 806 IGLVDKGI-AYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVW 864

Query: 514 NAMISGYSMH 523
             ++S   +H
Sbjct: 865 RTLLSACVVH 874



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 188/419 (44%), Gaps = 26/419 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N ++Y + L++CI+  DL+    IH Q++K    L+ +  +VL+++Y KL +L  A  + 
Sbjct: 489 NQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL 548

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
                ++ +S+ T I GYT  +   +A+  F  +   G   +    T  +     +   +
Sbjct: 549 IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALK 608

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF------DGLFNDCF----- 223
               + A     G  S+     AL+  +S CG +E +   F      D +  +       
Sbjct: 609 EGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQ 668

Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                EEAL  F +M   G   NNFTF   +KA      ++  K  H    KT Y+ +  
Sbjct: 669 QSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETE 728

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V  AL+ +Y K G IS+A + F E+  K+ + W+ +I  Y++     +A++ F +M  + 
Sbjct: 729 VCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSN 788

Query: 339 VAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
           V PN  T V VL AC+ +  +D G     S+    GL         ++D+  + G +  +
Sbjct: 789 VRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRA 848

Query: 398 VELFAESP-KRNHVTWNTMIVGYV-----QLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
            E   E P K + + W T++   V     ++GE     ++    LE +  AT V  S++
Sbjct: 849 KEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLL---ELEPEDSATYVLLSNL 904


>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  546 bits (1406), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 278/712 (39%), Positives = 412/712 (57%), Gaps = 27/712 (3%)

Query: 121 NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVF 180
           N + +  TI GY  +  + +A+ L+  + R G   +   F + +K   S    +    V 
Sbjct: 84  NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVH 143

Query: 181 ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFE 224
             +   G +S+  VGTAL   ++ CG +E AR+VFD +                 N    
Sbjct: 144 EDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPY 203

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           EAL  FS+M+  G KPN+ T   V+  C  L  +   K  H  A+++  E D+ V   L+
Sbjct: 204 EALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLV 263

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
           ++Y K G ++ A ++FE MP +DV  W+ +I  Y+      +A+  F RM+   + PN  
Sbjct: 264 NMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSI 323

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           T VSVL ACA +  L+ G QIH   +R G  S+  V NAL+++YAKCG + ++ +LF   
Sbjct: 324 TMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERM 383

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
           PK+N V WN +I GY Q G   +A+ +F +M  + +        SVL ACA   ALE G 
Sbjct: 384 PKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGK 443

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
           Q+H  T+++ ++ +VVV   L+D+YAKCG++  A+ +F+ M + + VSW  MI  Y +HG
Sbjct: 444 QIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHG 503

Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY 584
              + L +F  MQ+ G + +++ F  +L+ACS+ GL++QG  YF+ M ++YG+ P +EHY
Sbjct: 504 HGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHY 563

Query: 585 TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEP 644
             +V LLGRAGHLD+A  +I+ +  +P   +W ALLGAC IH N+E+G  +A+H+ + +P
Sbjct: 564 ACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDP 623

Query: 645 EDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHA 693
           ++   +VLLSNIYA A+ W           EK   K+PG S +     V  F  GD +H 
Sbjct: 624 DNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRTHP 683

Query: 694 DMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPS 753
               I  MLE L  + RKAGY+P+ +  L+DV E+ KE  L  HSEKLA++F +    P 
Sbjct: 684 QSEQIYAMLEILYEQMRKAGYVPNTNLALQDVEEEAKENILSSHSEKLAISFGIINTSPG 743

Query: 754 SPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            PIRI+KNLR+C DCH A K ISKIV REII+RD +RFHH ++G CSCGD+W
Sbjct: 744 IPIRIMKNLRVCSDCHNATKFISKIVGREIIVRDANRFHHVKNGFCSCGDYW 795



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 142/485 (29%), Positives = 253/485 (52%), Gaps = 22/485 (4%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           + + +++C    DLQ    +H  ++ +G   D+     L ++Y K   L +A ++FD MP
Sbjct: 123 FLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMP 182

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
           +R+ +S+   I GY+ + Q  EA+ LFS +   G + N     + + V   +   E    
Sbjct: 183 KRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQ 242

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDC 222
           +     + G +S+  V   L++ ++ CG V  A K+F+ +                 N  
Sbjct: 243 IHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQ 302

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
             EAL FF++M+  G KPN+ T   VL AC  L  +   +  HG A+++ +E +  V  A
Sbjct: 303 HHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNA 362

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+++Y K G +++A ++FE MPKK+V+ W+ +I+ Y+Q     +A+ LF  M+   + P+
Sbjct: 363 LVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPD 422

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
            F  VSVL ACA    L+ G QIH   +R G  S+V V   L+D+YAKCG +  + +LF 
Sbjct: 423 SFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFE 482

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
             P+++ V+W TMI+ Y   G    A+ +FSKM E       + ++++L AC+    ++ 
Sbjct: 483 RMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQ 542

Query: 463 GMQ-VHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDAR-LVFDMMNDWNEVSWNAMIS 518
           G+Q   C+  K++Y +   + +   L+D+  + G + +A  ++ +M  + +   W A++ 
Sbjct: 543 GLQYFQCM--KSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLG 600

Query: 519 GYSMH 523
              +H
Sbjct: 601 ACRIH 605



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 112/328 (34%), Positives = 186/328 (56%), Gaps = 10/328 (3%)

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
           + + + W   I  Y +      A+ L+ +M++  + P++  F+SV++AC +   L  G +
Sbjct: 82  RNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRK 141

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
           +H  ++  G  SDV V  AL  +Y KCG +EN+ ++F   PKR+ V+WN +I GY Q G+
Sbjct: 142 VHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQ 201

Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA 484
             +A+ +FS+M    +     T  SV+  CA L ALE G Q+HC  +++  + DV+V N 
Sbjct: 202 PYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNG 261

Query: 485 LIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPN 544
           L++MYAKCG++  A  +F+ M   +  SWNA+I GYS++    E L  F+ MQ RG +PN
Sbjct: 262 LVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPN 321

Query: 545 NLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY----TSMVSLLGRAGHLDKA 600
           ++T V VL AC++   LEQG+      +  Y I    E       ++V++  + G+++ A
Sbjct: 322 SITMVSVLPACAHLFALEQGQ-----QIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSA 376

Query: 601 AKLIEGIPFQPSVMIWRALLGACIIHNN 628
            KL E +P + +V+ W A++     H +
Sbjct: 377 YKLFERMP-KKNVVAWNAIISGYSQHGH 403



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 170/360 (47%), Gaps = 17/360 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           NS +  + +  C     L+    IHC  ++ G   D+   N L+N+Y K   +  A KLF
Sbjct: 220 NSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLF 279

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           + MP R+  S+   I GY+++SQ  EA+  F+ +   G + N     + L     +   E
Sbjct: 280 ERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALE 339

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF----------- 223
               +     + G +SN  VG AL++ ++ CG V  A K+F+ +                
Sbjct: 340 QGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYS 399

Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                 EAL  F +M+A G KP++F    VL AC     +   K  HG  +++ +E ++ 
Sbjct: 400 QHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVV 459

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V   L+D+Y K G ++ A+++FE MP++DV+ W+ MI  Y       DA+ LF +M++  
Sbjct: 460 VGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETG 519

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQ-IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
              +   F ++L AC+    +D G Q    +    GL   +     L+D+  + G ++ +
Sbjct: 520 TKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEA 579



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 124/227 (54%), Gaps = 2/227 (0%)

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
           N  +      + N V W   I+GYV+ G   KA+ ++ +M    +   ++ + SV++AC 
Sbjct: 72  NQTQFTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACG 131

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
           S + L+ G +VH   +   ++ DV+V  AL  MY KCGS+ +AR VFD M   + VSWNA
Sbjct: 132 SQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNA 191

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           +I+GYS +G   E L +F  MQ  G +PN+ T V V+  C++   LEQG+          
Sbjct: 192 IIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQ-IHCYAIRS 250

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           GIE  +     +V++  + G+++ A KL E +P +  V  W A++G 
Sbjct: 251 GIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIR-DVASWNAIIGG 296


>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
 gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 868

 Score =  546 bits (1406), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 298/814 (36%), Positives = 438/814 (53%), Gaps = 63/814 (7%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           NS++Y   ++ C +    +    +H Q+ + G  +D++  N L+N Y K   +  A ++F
Sbjct: 55  NSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVF 114

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             M  R+ +++ + I  Y  ++   +A   F  +     E N   F + LK   +    E
Sbjct: 115 RRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILE 174

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
               +   V  +G +++  V TALI  +S CG +  A +VF  +                
Sbjct: 175 KGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANA 234

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            +    EA   + QM   G  PN  TF  +L +C   + +   +  H    +   E D+ 
Sbjct: 235 QHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMI 294

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDL----SIDAV-ELFCR 333
           VA AL+ +Y K   +  AR IF+ M K+DVI WS MIA YAQ+      SID V +L  R
Sbjct: 295 VANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLER 354

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCG- 392
           MR+  V PN+ TF+S+L+AC     L+ G QIH+ + +VG   D  +  A+ ++YAKCG 
Sbjct: 355 MRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGS 414

Query: 393 ---------RMEN---------------------SVELFAESPKRNHVTWNTMIVGYVQL 422
                    +M N                     + ++F+E P RN V+WN MI GY Q 
Sbjct: 415 IYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQN 474

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
           G++ K   + S M  E      VT  ++L AC +LA LE G  VH   VK   + D VVA
Sbjct: 475 GDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVA 534

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
            +LI MY+KCG + +AR VFD M++ + V+WNAM++GY  HG   E + +F  M +    
Sbjct: 535 TSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVS 594

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           PN +T   V+SACS  GL+++G   F+ M  ++ + P  +HY  MV LLGRAG L +A +
Sbjct: 595 PNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEE 654

Query: 603 LIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARS 662
            I+ +P +P + +W ALLGAC  HNNV++   +A HIL+ EP   + ++ LSNIYA A  
Sbjct: 655 FIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIYAQAGR 714

Query: 663 W-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRK 711
           W           ++   K+ G S IE  G +H F A D +H +++ I   LE L  + ++
Sbjct: 715 WDDSTKVRRVMDDRGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDAIHAELETLTKEMKE 774

Query: 712 AGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTA 771
           AGY PD+  VL DV + +KE+ L  HSEKLA+A+ L K P  +PIRI+KNLR+C DCHTA
Sbjct: 775 AGYTPDMRFVLHDVDDVQKEKALCHHSEKLAIAYGLLKTPSGTPIRIMKNLRVCGDCHTA 834

Query: 772 IKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            K ISKI +REI+ RD +RFH+F +G CSCGDFW
Sbjct: 835 TKFISKIRKREIVARDANRFHYFNNGTCSCGDFW 868



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 162/549 (29%), Positives = 270/549 (49%), Gaps = 60/549 (10%)

Query: 135 SSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFV 194
           + +  EA+ L   + + G  +N   +   ++        E    V   + +LG + + ++
Sbjct: 34  AGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYL 93

Query: 195 GTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRAVGF 238
           G +LI+ +S    V  A +VF  +                 N+   +A + F +M     
Sbjct: 94  GNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANI 153

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
           +PN  TF  +LKAC     +   +  H        E D+ VA AL+ +Y+K GEIS A  
Sbjct: 154 EPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACE 213

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           +F +M +++V+ W+ +I   AQ     +A EL+ +M QA ++PN  TFVS+L +C T E 
Sbjct: 214 VFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEA 273

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           L+ G +IHS +   GL +D+ V+NAL+ +Y KC  ++ + E+F    KR+ ++W+ MI G
Sbjct: 274 LNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAG 333

Query: 419 YVQLGEVGKAMI-----MFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
           Y Q G   K  I     +  +M  E V   +VT+ S+LRAC +  ALE G Q+H    K 
Sbjct: 334 YAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKV 393

Query: 474 NYDMDVVVANALIDMYAKCGSITDARLVFDMMND-----W-------------------- 508
            +++D  +  A+ +MYAKCGSI +A  VF  M +     W                    
Sbjct: 394 GFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVF 453

Query: 509 ------NEVSWNAMISGYSMHGLSAEVLKVFDL---MQQRGWRPNNLTFVGVLSACSNGG 559
                 N VSWN MI+GY+ +G   +++KVF+L   M+  G++P+ +T + +L AC    
Sbjct: 454 SEMPTRNVVSWNLMIAGYAQNG---DIVKVFELLSSMKAEGFQPDRVTVITILEACGALA 510

Query: 560 LLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRAL 619
            LE+G+      V   G+E      TS++ +  + G + +A  + + +  + +V  W A+
Sbjct: 511 GLERGKLVHAEAV-KLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVA-WNAM 568

Query: 620 LGACIIHNN 628
           L     H +
Sbjct: 569 LAGYGQHGD 577



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/526 (24%), Positives = 241/526 (45%), Gaps = 56/526 (10%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N  ++ + L++C     L+    IH  V   G   D+     L+ +Y K   +  A +
Sbjct: 154 EPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACE 213

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +F +M ERN +S+   IQ      +  EA  L+  + + G   N   F + L    +   
Sbjct: 214 VFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEA 273

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------------- 219
                 + + + + G +++  V  ALI  +  C  V+ AR++FD +              
Sbjct: 274 LNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAG 333

Query: 220 --------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT 271
                    +  +E      +MR  G  PN  TF  +L+AC     +   +  H    K 
Sbjct: 334 YAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKV 393

Query: 272 CYEMDLYVAVAL-------------------------------LDLYTKSGEISNARRIF 300
            +E+D  +  A+                               L +Y K G++S+A ++F
Sbjct: 394 GFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVF 453

Query: 301 EEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLD 360
            EMP ++V+ W+ MIA YAQ    +   EL   M+     P++ T +++L+AC  + GL+
Sbjct: 454 SEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLE 513

Query: 361 LGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYV 420
            G  +H+  V++GL SD  V+ +L+ +Y+KCG++  +  +F +   R+ V WN M+ GY 
Sbjct: 514 RGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYG 573

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV 480
           Q G+  +A+ +F +ML+E+V   E+T ++V+ AC+    ++ G ++  + ++ ++ M   
Sbjct: 574 QHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRM-MQEDFKMTPR 632

Query: 481 VAN--ALIDMYAKCGSITDARLVFDMMNDWNEVS-WNAMISGYSMH 523
             +   ++D+  + G + +A      M    ++S W+A++     H
Sbjct: 633 KQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSH 678



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 84/332 (25%), Positives = 131/332 (39%), Gaps = 69/332 (20%)

Query: 25  LRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHC---- 80
           LR  +A  AL   +  ++  + + F +          SLQ+ I N      M   C    
Sbjct: 371 LRACTAHGALEQGRQIHAELSKVGFELDR--------SLQTAIFN------MYAKCGSIY 416

Query: 81  ---QVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
              QV  K    ++ A    L++Y+K   L  A K+F EMP RN +S+   I GY  +  
Sbjct: 417 EAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGD 476

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
            V+   L S++  EG + +       L+   ++   E    V A   KLG +S+  V T+
Sbjct: 477 IVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATS 536

Query: 198 LIDAFSVCGCVEFARKVFDGLFN-DCFE---------------EALNFFSQMRAVGFKPN 241
           LI  +S CG V  AR VFD + N D                  EA++ F +M      PN
Sbjct: 537 LIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPN 596

Query: 242 NFTFAFVLKACL-------GLDTIRV---------AKSAHGCALKTCYEMDLYVAVALLD 285
             T   V+ AC        G +  R+          K  +GC               ++D
Sbjct: 597 EITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGC---------------MVD 641

Query: 286 LYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
           L  ++G +  A    + MP + D+  W  ++ 
Sbjct: 642 LLGRAGRLQEAEEFIQSMPCEPDISVWHALLG 673



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 104/209 (49%), Gaps = 2/209 (0%)

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV 480
           + G + +A+ +   + +  +     TY  V+  CA     E G  VH    +   ++D+ 
Sbjct: 33  KAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIY 92

Query: 481 VANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG 540
           + N+LI+ Y+K   +  A  VF  M   + V+W++MI+ Y+ +   A+    F+ M    
Sbjct: 93  LGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDAN 152

Query: 541 WRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKA 600
             PN +TF+ +L AC+N  +LE+G     ++V   G+E  +   T+++++  + G +  A
Sbjct: 153 IEPNRITFLSILKACNNYSILEKGRK-IHTIVKAMGMETDVAVATALITMYSKCGEISVA 211

Query: 601 AKLIEGIPFQPSVMIWRALLGACIIHNNV 629
            ++   +  + +V+ W A++ A   H  +
Sbjct: 212 CEVFHKMT-ERNVVSWTAIIQANAQHRKL 239


>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 989

 Score =  546 bits (1406), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 279/774 (36%), Positives = 443/774 (57%), Gaps = 27/774 (3%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           +++ L +C + +  +    +H  ++K G   + F  N L+ +Y +   L  A ++F +M 
Sbjct: 216 FSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMH 275

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
            R+ IS+ + I G         A+ LF  +  +  + +     + L    S+G       
Sbjct: 276 RRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQ 335

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG-------LFN---------DC 222
           + + V K+G  S+  +  +L+D +  C  +E A + F         L+N           
Sbjct: 336 LHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGN 395

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
             E+   F QM+  G  PN +T+  +L+ C  L  + + +  H   +K+ ++ ++YV   
Sbjct: 396 LSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSV 455

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+D+Y K GE+  AR I + + ++DV+ W+ MIA Y Q DL  +A++LF  M    +  +
Sbjct: 456 LIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSD 515

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
              F S + ACA ++ L+ G QIH+     G   D+ + NAL+ +YA+CGR +++   F 
Sbjct: 516 NIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFE 575

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
           +   +++++WN +I G+ Q G   +A+ +FS+M +  V A   T+ S + A A+ A ++ 
Sbjct: 576 KIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQ 635

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G Q+H + +K  YD +   +N LI +Y+KCGSI DA+  F  M + N VSWNAMI+GYS 
Sbjct: 636 GKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQ 695

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
           HG  +E + +F+ M+Q G  PN++TFVGVLSACS+ GL+ +G +YF+SM   +G+ P  E
Sbjct: 696 HGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPE 755

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDF 642
           HY  +V LLGRA  L  A + IE +P +P  MIWR LL AC +H N+EIG  +A+H+L+ 
Sbjct: 756 HYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLEL 815

Query: 643 EPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTS 691
           EPED AT+VLLSN+YA++  W           ++   KEPG SWIE +  +H F  GD  
Sbjct: 816 EPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRL 875

Query: 692 HADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMP 751
           H     I   ++ LN ++ + GY+ D   +L DV +++K+   ++HSEKLA+AF L  + 
Sbjct: 876 HPLAEQIYEYIDDLNERAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLT 935

Query: 752 PSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            + PIR+IKNLR+C DCH  IK +SKI  R I++RD +RFHHF+ G CSC D+W
Sbjct: 936 NTMPIRVIKNLRVCNDCHNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW 989



 Score =  288 bits (736), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 181/587 (30%), Positives = 302/587 (51%), Gaps = 23/587 (3%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +Y    + C  +  L  A  +H ++ K G   +    + L+++Y+    + +A KLF
Sbjct: 9   NVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLF 68

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA- 173
           D++P  N   +   I G        + +GLFS +  E    +   F + L+   S G A 
Sbjct: 69  DDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA-CSGGKAP 127

Query: 174 -ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------------- 219
            ++   + A +   G  S+  V   LID +S  G V+ A+ VF+ LF             
Sbjct: 128 FQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISG 187

Query: 220 ---NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
              N   +EA+  F QM      P  + F+ VL AC  ++  ++ +  HG  +K     +
Sbjct: 188 LSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSE 247

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
            +V  AL+ LY++ G +  A +IF +M ++D I ++ +I+  AQ   S  A++LF +M+ 
Sbjct: 248 TFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQL 307

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             + P+  T  S+L ACA++     G Q+HS V+++G+ SD+ +  +L+D+Y KC  +E 
Sbjct: 308 DCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIET 367

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           + E F  +   N V WN M+V Y QLG + ++  +F +M  E +   + TY S+LR C S
Sbjct: 368 AHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTS 427

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           L AL+ G Q+H   +K+ +  +V V + LIDMYAK G +  AR +   + + + VSW AM
Sbjct: 428 LGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAM 487

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEA-YFKSMVANY 575
           I+GY+ H L AE LK+F  M+ +G R +N+ F   +SAC+    L QG+  + +S ++ Y
Sbjct: 488 IAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGY 547

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
             +  I +  ++VSL  R G    A    E I  + ++  W AL+  
Sbjct: 548 SEDLSIGN--ALVSLYARCGRAQDAYLAFEKIDAKDNIS-WNALISG 591



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 179/334 (53%), Gaps = 1/334 (0%)

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           M   G + N  T+ ++ + C    ++  AK  H    K+ ++ +  +   L+D+Y   GE
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           + NA ++F+++P  +V  W+ +I+      L+   + LF  M    V P++ TF SVL+A
Sbjct: 61  VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120

Query: 353 CATMEG-LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
           C+  +    +  QIH+ ++  G  S   V N L+D+Y+K G ++ +  +F     ++ V+
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
           W  MI G  Q G   +A+++F +M +  V  T   +SSVL AC  +   + G Q+H   V
Sbjct: 181 WVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIV 240

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
           K     +  V NAL+ +Y++ G++  A  +F  M+  + +S+N++ISG +  G S   L+
Sbjct: 241 KWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQ 300

Query: 532 VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE 565
           +F+ MQ    +P+ +T   +LSAC++ G   +G+
Sbjct: 301 LFEKMQLDCMKPDCVTVASLLSACASVGAGYKGK 334



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 1/188 (0%)

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGS 494
           M E  + A   TY  +   C +  +L    ++H    K+ +D + V+ + LID+Y   G 
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 495 ITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSA 554
           + +A  +FD +   N   WN +ISG     L+++VL +F LM      P+  TF  VL A
Sbjct: 61  VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120

Query: 555 CSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVM 614
           CS G    Q      + + ++G          ++ L  + GH+D A  + E +  + SV 
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180

Query: 615 IWRALLGA 622
            W A++  
Sbjct: 181 -WVAMISG 187



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 58/119 (48%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N  ++ +++ +     +++    IH  ++K G   +  A+NVL+ +Y K   + DA +
Sbjct: 614 EANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKR 673

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
            F EMPE+N +S+   I GY+      EAV LF  + + G   N   F   L     +G
Sbjct: 674 EFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVG 732


>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1047

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 276/777 (35%), Positives = 437/777 (56%), Gaps = 29/777 (3%)

Query: 57   HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
            +++++ L +C + + L+    +H  VLK G   D +  N L+++Y  L  L  A  +F  
Sbjct: 272  YAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSN 331

Query: 117  MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
            M +R+ +++ T I G +      +A+ LF  +  +G E +     + +    S G     
Sbjct: 332  MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSG 391

Query: 177  PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF-----------------DGLF 219
              + A   KLG  SN  +  AL++ ++ C  +E A   F                  GL 
Sbjct: 392  QQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLL 451

Query: 220  NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
            +D    +   F QM+     PN +T+  +LK C+ L  + + +  H   +KT ++++ YV
Sbjct: 452  DD-LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYV 510

Query: 280  AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
               L+D+Y K G++  A  I      KDV+ W+ MIA Y Q +    A+  F +M    +
Sbjct: 511  CSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 570

Query: 340  APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
              ++    + + ACA ++ L  G QIH+     G  SD+   NAL+ +Y+KCG +E +  
Sbjct: 571  RSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYL 630

Query: 400  LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
             F ++   +++ WN ++ G+ Q G   +A+ +F++M  E + +   T+ S ++A +  A 
Sbjct: 631  AFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETAN 690

Query: 460  LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
            ++ G QVH +  K  YD +  V NA+I MYAKCGSI+DA+  F  ++  NEVSWNAMI+ 
Sbjct: 691  MKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINA 750

Query: 520  YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
            YS HG  +E L  FD M     RPN++T VGVLSACS+ GL+++G  YF+SM   YG+ P
Sbjct: 751  YSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAP 810

Query: 580  CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHI 639
              EHY  +V +L RAG L +A   I  +P +P  ++WR LL AC++H N+EIG  +A H+
Sbjct: 811  KPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVVHKNMEIGEFAAHHL 870

Query: 640  LDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAG 688
            L+ EPED AT+VLLSN+YA+ R W           EK   KEPG SWIE +  +H F  G
Sbjct: 871  LELEPEDSATYVLLSNLYAVCRKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVG 930

Query: 689  DTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALF 748
            D +H   + I    + L  ++ + GY+ D  ++L ++++++K+  +++HSEKLA++F L 
Sbjct: 931  DQNHPLADEIHEYFKDLTKRASEIGYVQDCFSLLSELQQEQKDPTIFIHSEKLAISFGLL 990

Query: 749  KMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
             +P + PI ++KNLR+C DCH  IK +SK+  REII+RD +RFHHF+ G CSC D+W
Sbjct: 991  SLPATMPINVMKNLRVCNDCHDWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1047



 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 171/594 (28%), Positives = 287/594 (48%), Gaps = 21/594 (3%)

Query: 63  LQSCIQ-NDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERN 121
           L+ C++ N  L     +H Q+LK G   +   +  LL+ Y+    L  A K+FDEMPER 
Sbjct: 74  LEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERT 133

Query: 122 TISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA-ELCPCVF 180
             ++   I+     S   +   LF  +  E    N   F+  L+       A ++   + 
Sbjct: 134 IFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIH 193

Query: 181 ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFE 224
           A +   G   +  V   LID +S  G V+ AR+VFDGL+                N+C  
Sbjct: 194 ARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEV 253

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           EA+  F  M  +G  P  + F+ VL AC  ++++ + +  HG  LK  +  D YV  AL+
Sbjct: 254 EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALV 313

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
            LY   G + +A  IF  M ++D + ++ +I   +Q      A+ELF RM+   + P+  
Sbjct: 314 SLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSN 373

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           T  S++ AC++   L  G Q+H+   ++G  S+  +  AL+++YAKC  +E ++  F E+
Sbjct: 374 TLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLET 433

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
              N V WN M+V Y  L ++  +  +F +M  E++   + TY S+L+ C  L  LE G 
Sbjct: 434 EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 493

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
           Q+H   +K ++ ++  V + LIDMYAK G +  A  +       + VSW  MI+GY+ + 
Sbjct: 494 QIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN 553

Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY 584
              + L  F  M  RG R + +     +SAC+    L++G+        + G    +   
Sbjct: 554 FDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS-GFSSDLPFQ 612

Query: 585 TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL-GACIIHNNVEIGRLSAQ 637
            ++V+L  + G++++A    E      ++  W AL+ G     NN E  R+ A+
Sbjct: 613 NALVTLYSKCGNIEEAYLAFEQTEAGDNIA-WNALVSGFQQSGNNEEALRVFAR 665



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 181/348 (52%), Gaps = 4/348 (1%)

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLD-TIRVAKSAHGCALKTCYEMDLY 278
           ++ F+E  N    +   G +PN+ T  ++L+ CL  + ++   +  H   LK  ++ +  
Sbjct: 47  DESFQE--NGIDSVENCGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNAC 104

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           ++  LLD Y   G++  A ++F+EMP++ +  W+ MI   A   LS     LF RM    
Sbjct: 105 LSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNEN 164

Query: 339 VAPNQFTFVSVLQAC-ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
           V PN+ TF  VL+AC       D+  QIH+ ++  GL     V N L+D+Y++ G ++ +
Sbjct: 165 VTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRA 224

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
             +F     ++H +W  MI G  +     +A+ +F  M    +  T   +SSVL AC  +
Sbjct: 225 RRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKI 284

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
            +LE G Q+H L +K  +  D  V NAL+ +Y   GS+  A  +F  M+  + V++N +I
Sbjct: 285 ESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLI 344

Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE 565
           +G S  G   + +++F  MQ  G  P++ T   ++ ACS+ G L  G+
Sbjct: 345 NGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQ 392



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 120/490 (24%), Positives = 228/490 (46%), Gaps = 20/490 (4%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E +S++ A+ + +C  +  L +   +H    K G   +      LLN+Y K + +  A  
Sbjct: 369 EPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALN 428

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
            F E    N + +   +  Y +      +  +F  +  E    N + + + LK  + +G 
Sbjct: 429 YFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGD 488

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCG--------CVEFARK-------VFDG 217
            EL   + + + K     NA+V + LID ++  G         + FA K       +  G
Sbjct: 489 LELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAG 548

Query: 218 LFNDCFEE-ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
                F++ AL  F QM   G + +       + AC GL  ++  +  H  A  + +  D
Sbjct: 549 YTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSD 608

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           L    AL+ LY+K G I  A   FE+    D I W+ +++ + Q+  + +A+ +F RM +
Sbjct: 609 LPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNR 668

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             +  N FTF S ++A +    +  G Q+H+++ + G  S+  V NA++ +YAKCG + +
Sbjct: 669 EGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISD 728

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           + + F E   +N V+WN MI  Y + G   +A+  F +M+   V    VT   VL AC+ 
Sbjct: 729 AKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSH 788

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDAR-LVFDMMNDWNEVSW 513
           +  ++ G++ +  ++   Y +     +   ++DM  + G ++ A+  + +M  + + + W
Sbjct: 789 IGLVDKGIE-YFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVW 847

Query: 514 NAMISGYSMH 523
             ++S   +H
Sbjct: 848 RTLLSACVVH 857



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 108/423 (25%), Positives = 192/423 (45%), Gaps = 26/423 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N ++Y + L++CI+  DL+    IH Q++K    L+ +  +VL+++Y KL +L  A  + 
Sbjct: 472 NQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDIL 531

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
                ++ +S+ T I GYT  +   +A+  F  +   G   +    T  +     +   +
Sbjct: 532 IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALK 591

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF------DGLFNDCF----- 223
               + A     G  S+     AL+  +S CG +E A   F      D +  +       
Sbjct: 592 EGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQ 651

Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                EEAL  F++M   G   NNFTF   +KA      ++  K  H    KT Y+ +  
Sbjct: 652 QSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETE 711

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V  A++ +Y K G IS+A++ F E+  K+ + W+ MI  Y++     +A++ F +M  + 
Sbjct: 712 VCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSN 771

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQ-IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
           V PN  T V VL AC+ +  +D G +   S+    GL         ++D+  + G +  +
Sbjct: 772 VRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRA 831

Query: 398 VELFAESP-KRNHVTWNTMIVGYV-----QLGEVGKAMIMFSKMLEEQVPATEVTYSSVL 451
            +   E P + + + W T++   V     ++GE     ++    LE +  AT V  S++ 
Sbjct: 832 KDFILEMPIEPDALVWRTLLSACVVHKNMEIGEFAAHHLL---ELEPEDSATYVLLSNLY 888

Query: 452 RAC 454
             C
Sbjct: 889 AVC 891


>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Cucumis sativus]
          Length = 1037

 Score =  544 bits (1401), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 286/755 (37%), Positives = 438/755 (58%), Gaps = 27/755 (3%)

Query: 78   IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
            +HC V+K G   + +  N L+ +Y +  +L  A ++F  M  R+ +S+ + I G      
Sbjct: 283  LHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGF 342

Query: 138  FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
               A+ LF+ + R+  + +     + L    S+G       + +   K G  ++  +  +
Sbjct: 343  SDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGS 402

Query: 198  LIDAFSVCGCVEFARKVFDG-------LFN---------DCFEEALNFFSQMRAVGFKPN 241
            L+D +S C  VE A K F         L+N         D   ++   F QM+  G  PN
Sbjct: 403  LLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPN 462

Query: 242  NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
             FT+  +L+ C  L  + + +  H   +KT +++++YV   L+D+Y K G+++ A RI  
Sbjct: 463  QFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILR 522

Query: 302  EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL 361
             +P+ DV+ W+ MIA Y Q D+  +A++LF  M    +  +   F S + ACA +  L  
Sbjct: 523  RLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQ 582

Query: 362  GNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQ 421
            G QIH+     G  +D+ ++NAL+ +YA+CGR++ +   F +   +N+++WN+++ G  Q
Sbjct: 583  GQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQ 642

Query: 422  LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVV 481
             G   +A+ +F +ML  +      TY S + A ASLA ++ G Q+H + +K  YD +  V
Sbjct: 643  SGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREV 702

Query: 482  ANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW 541
            +N+LI +YAK GSI+DA   F+ M++ N +SWNAMI+GYS HG   E L++F+ M+  G 
Sbjct: 703  SNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGI 762

Query: 542  RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAA 601
             PN++TFVGVLSACS+ GL+++G  YF+SM   + + P  EHY  +V LLGRAG LD+A 
Sbjct: 763  MPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAM 822

Query: 602  KLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMAR 661
            + I+ +P     MIWR LL AC+IH N+EIG  +A H+L+ EPED AT+VL+SNIYA++R
Sbjct: 823  EYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSR 882

Query: 662  SW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSR 710
             W           ++   KEPG SWIE +  VH F AGD  H   N I   +  LN ++ 
Sbjct: 883  QWIHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTS 942

Query: 711  KAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHT 770
            + GY+ D  ++L +  + +K+    VHSEKLA+AF L  +  + PIR++KNLR+C DCH 
Sbjct: 943  EIGYVQDSFSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHN 1002

Query: 771  AIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
             IK +SKI  R II+RD HRFHHF  G CSC DFW
Sbjct: 1003 WIKYVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037



 Score =  275 bits (702), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 174/586 (29%), Positives = 292/586 (49%), Gaps = 21/586 (3%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +Y   L+ C+ +  L   M +HC++ K G   +    + L++ Y +      A K+F
Sbjct: 57  NYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVF 116

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA- 173
           DE   R+  S+   I  +       +   LF  +  EG   N + F   LK  V    A 
Sbjct: 117 DENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAF 176

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GL 218
                V +  +  G DS+  V   LID +S  G +E A+KVF+               GL
Sbjct: 177 NYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGL 236

Query: 219 F-NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
             N   EEA+  F  M A    P  +  + VL A   +    + +  H   +K  +  + 
Sbjct: 237 SQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSET 296

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
           YV   L+ LY++S ++ +A RIF  M  +D + ++ +I+   Q   S  A+ELF +M++ 
Sbjct: 297 YVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRD 356

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            + P+  T  S+L ACA++  L  G Q+HS  ++ G+ +D+ +  +L+D+Y+KC  +E +
Sbjct: 357 CLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETA 416

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
            + F  +   N V WN M+V Y QL  +  +  +F +M  E +   + TY S+LR C SL
Sbjct: 417 HKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSL 476

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
            AL  G Q+H   +K  + ++V V + LIDMYAK G +  A  +   + + + VSW AMI
Sbjct: 477 GALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMI 536

Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEA-YFKSMVANYG 576
           +GY  H + +E L++F+ M+ RG + +N+ F   +SAC+    L QG+  + +S  A +G
Sbjct: 537 AGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFG 596

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
            +  I +  +++SL  R G + +A    E I  + ++  W +L+  
Sbjct: 597 ADLSINN--ALISLYARCGRIQEAYLAFEKIGDKNNIS-WNSLVSG 639



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 195/399 (48%), Gaps = 6/399 (1%)

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           + +NF   M   G + N   + ++L+ CL   ++      H    K+ ++ +  +  +L+
Sbjct: 44  QLMNF---MEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLV 100

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
           D Y + G+   A ++F+E   + V  W+ MI  +     +     LF RM    + PN +
Sbjct: 101 DNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGY 160

Query: 345 TFVSVLQACATME-GLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
           TF  VL+AC   +   +   Q+HS     G  S   V+N L+D+Y+K G +E++ ++F  
Sbjct: 161 TFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNC 220

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
              ++ VTW  MI G  Q G   +A+++F  M   ++  T    SSVL A   +   E G
Sbjct: 221 ICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELG 280

Query: 464 MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMH 523
            Q+HCL +K  +  +  V N L+ +Y++   +  A  +F  MN  + VS+N++ISG    
Sbjct: 281 EQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQ 340

Query: 524 GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEH 583
           G S   L++F  MQ+   +P+ +T   +LSAC++ G L +G     S     G+   I  
Sbjct: 341 GFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKG-MQLHSHAIKAGMSADIIL 399

Query: 584 YTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
             S++ L  +   ++ A K       + ++++W  +L A
Sbjct: 400 EGSLLDLYSKCADVETAHKFFLTTETE-NIVLWNVMLVA 437



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 80/277 (28%), Positives = 131/277 (47%), Gaps = 2/277 (0%)

Query: 328 VELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDV 387
           ++L   M +  V  N   ++ +L+ C T   L    ++H  + + G   +  + ++L+D 
Sbjct: 43  IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102

Query: 388 YAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTY 447
           Y + G    +V++F E+  R+  +WN MI  +V      +   +F +ML E +     T+
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162

Query: 448 SSVLRAC-ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN 506
           + VL+AC     A     QVH  T    +D   +VAN LID+Y+K G I  A+ VF+ + 
Sbjct: 163 AGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCIC 222

Query: 507 DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEA 566
             + V+W AMISG S +GL  E + +F  M      P       VLSA +   L E GE 
Sbjct: 223 MKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQ 282

Query: 567 YFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKL 603
               +V  +G          +V+L  R+  L  A ++
Sbjct: 283 -LHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERI 318



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 130/288 (45%), Gaps = 33/288 (11%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           +F++  +A+++ +C     L+    IH Q    G   DL   N L+++Y +  R+ +A  
Sbjct: 561 QFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYL 620

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
            F+++ ++N IS+ + + G   S  F EA+ +F  + R   E+N F + + +    S+  
Sbjct: 621 AFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLAN 680

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------------- 219
            +    + + V K G+DS   V  +LI  ++  G +  A + F+ +              
Sbjct: 681 IKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITG 740

Query: 220 ---NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL-------GLDTIRVAKSAHGCAL 269
              + C  EAL  F +M+  G  PN+ TF  VL AC        GLD        H    
Sbjct: 741 YSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVP 800

Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIAR 317
           K+    + YV V  +DL  ++G++  A    +EMP    IP   MI R
Sbjct: 801 KS----EHYVCV--VDLLGRAGQLDRAMEYIKEMP----IPADAMIWR 838



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 1/196 (0%)

Query: 427 KAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALI 486
           K + + + M E  V +    Y  +L  C +  +L   M++HC   K+ +D + ++ ++L+
Sbjct: 41  KRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLV 100

Query: 487 DMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNL 546
           D Y + G    A  VFD  ++ +  SWN MI  +     + +V  +F  M   G  PN  
Sbjct: 101 DNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGY 160

Query: 547 TFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEG 606
           TF GVL AC  G +         S    YG +        ++ L  + G+++ A K+   
Sbjct: 161 TFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNC 220

Query: 607 IPFQPSVMIWRALLGA 622
           I  +  ++ W A++  
Sbjct: 221 ICMK-DIVTWVAMISG 235



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 1/138 (0%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           +E N  +Y +++ +     +++    IH  VLK G   +   +N L+++Y K   + DA 
Sbjct: 661 AEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAW 720

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
           + F++M ERN IS+   I GY+     +EA+ LF  +   G   N   F   L     +G
Sbjct: 721 REFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIG 780

Query: 172 WAELCPCVFACVYKLGHD 189
             +     F  ++K+ HD
Sbjct: 781 LVKEGLDYFESMFKI-HD 797


>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 882

 Score =  543 bits (1400), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 291/768 (37%), Positives = 425/768 (55%), Gaps = 33/768 (4%)

Query: 71  DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM----PERNTISFV 126
           D++    +H   +      D+F  N L+ VY     + +A ++FDE      ERN +S+ 
Sbjct: 115 DVRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWN 174

Query: 127 TTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKL 186
           T I  Y  + Q  +A+G+F  +   G   N F F+  +         E    V   V + 
Sbjct: 175 TMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRT 234

Query: 187 GHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-----------FNDCF-----EEALNFF 230
           G++ + F   AL+D +S  G +E A  VF+ +            + C        AL   
Sbjct: 235 GYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELL 294

Query: 231 SQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKS 290
            QM++ G  PN FT + VLKAC G     + +  HG  +K   + D +VAV L+D+Y K 
Sbjct: 295 LQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKH 354

Query: 291 GEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA--PNQFTFVS 348
           G + +AR++F+ MP++D+I W+ +I+  +      + + LF RMR+  +    N+ T  S
Sbjct: 355 GFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLAS 414

Query: 349 VLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRN 408
           VL++ A+ E +    Q+H+L  ++GLLSD  V N L+D Y KCG+++ ++++F ES   +
Sbjct: 415 VLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDD 474

Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHC 468
            ++  TM+    Q      A+ +F +ML + +       SS+L AC SL+A E G QVH 
Sbjct: 475 IISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHA 534

Query: 469 LTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAE 528
             +K  +  DV   NAL+  YAKCGSI DA + F  + +   VSW+AMI G + HG    
Sbjct: 535 HLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKR 594

Query: 529 VLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMV 588
            L +F  M   G  PN++T   VLSAC++ GL++  + YF+SM   +GI+   EHY  M+
Sbjct: 595 ALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMI 654

Query: 589 SLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEA 648
            +LGRAG L+ A +L+  +PFQ +  +W ALLGA  +H + E+GR++A+ +   EPE   
Sbjct: 655 DILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLEPEKSG 714

Query: 649 THVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNI 697
           THVLL+N YA A  W++ A            KEP +SW+E +  VH F  GD SH     
Sbjct: 715 THVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSHPMTRD 774

Query: 698 IRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIR 757
           I G L  L     KAGY+P++   L DV   EKE  L  HSE+LA+AFAL   P  +PIR
Sbjct: 775 IYGKLAELGDLMNKAGYVPNVEVDLHDVDRSEKELLLSHHSERLAVAFALISTPSGAPIR 834

Query: 758 IIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           + KNLRIC DCH A K ISKIV REIIIRD++RFHHF +G CSCGD+W
Sbjct: 835 VKKNLRICRDCHVAFKYISKIVSREIIIRDINRFHHFTNGTCSCGDYW 882



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 168/576 (29%), Positives = 279/576 (48%), Gaps = 35/576 (6%)

Query: 78  IHCQVLKKGNCLDLFA--TNVLLNVYVKLNRLPDATK-LFDEMPERNTISFVTTIQGYTV 134
           +H  +LK G    L A  +N LL +Y +  RLP A + +FDE+P+   +S+ + +  Y+ 
Sbjct: 26  LHSHLLKSG----LLAGFSNHLLTLYSRC-RLPSAARAVFDEIPDPCHVSWSSLVTAYSN 80

Query: 135 SSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFV 194
           +    +A+  F  +   G   N FA    LK    + +      + A   +L HD   FV
Sbjct: 81  NGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPDVRFGAQVHAL-AVATRLVHD--VFV 137

Query: 195 GTALIDAFSVCGCVEFARKVFDGLF--------------------NDCFEEALNFFSQMR 234
             AL+  +   G V+ AR++FD                       ND   +A+  F +M 
Sbjct: 138 ANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMV 197

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
             G +PN F F+ V+ AC G   +   +  HG  ++T YE D++ A AL+D+Y+K G+I 
Sbjct: 198 WSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIE 257

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
            A  +FE+MP  DV+ W+  I+          A+EL  +M+ + + PN FT  SVL+ACA
Sbjct: 258 MAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACA 317

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
                +LG QIH  +V+     D FV+  L+D+YAK G ++++ ++F   P+R+ + WN 
Sbjct: 318 GAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNA 377

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEE--QVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
           +I G    G  G+ + +F +M +E   +     T +SVL++ AS  A+    QVH L  K
Sbjct: 378 LISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEK 437

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
                D  V N LID Y KCG +  A  VF      + +S   M++  S      + +K+
Sbjct: 438 IGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKL 497

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
           F  M ++G  P++     +L+AC++    EQG+     ++             ++V    
Sbjct: 498 FVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAG-NALVYAYA 556

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
           + G ++ A     G+P +  ++ W A++G    H +
Sbjct: 557 KCGSIEDADMAFSGLP-ERGIVSWSAMIGGLAQHGH 591



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 141/490 (28%), Positives = 236/490 (48%), Gaps = 22/490 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N   ++  + +C  + DL+    +H  V++ G   D+F  N L+++Y KL  +  A  +F
Sbjct: 204 NEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVF 263

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           ++MP  + +S+   I G         A+ L   +   G   N F  ++ LK     G   
Sbjct: 264 EKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFN 323

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-----------GLFNDCF 223
           L   +   + K   D + FV   L+D ++  G ++ ARKVFD            L + C 
Sbjct: 324 LGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCS 383

Query: 224 E-----EALNFFSQMRAVG--FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
                 E L+ F +MR  G     N  T A VLK+    + I   +  H  A K     D
Sbjct: 384 HDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSD 443

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
            +V   L+D Y K G++  A ++F+E    D+I  + M+   +Q D   DA++LF +M +
Sbjct: 444 SHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLR 503

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             + P+ F   S+L AC ++   + G Q+H+ +++    SDVF  NAL+  YAKCG +E+
Sbjct: 504 KGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIED 563

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           +   F+  P+R  V+W+ MI G  Q G   +A+ +F +ML+E V    +T +SVL AC +
Sbjct: 564 ADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSAC-N 622

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSW 513
            A L    + +  ++K  + +D    +   +ID+  + G + DA  LV +M    N   W
Sbjct: 623 HAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVW 682

Query: 514 NAMISGYSMH 523
            A++    +H
Sbjct: 683 GALLGASRVH 692



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 139/288 (48%), Gaps = 11/288 (3%)

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           T  S L    T   L  G  +HS +++ GLL+    SN L+ +Y++C     +  +F E 
Sbjct: 6   TIGSALARFGTSRSLFAGAHLHSHLLKSGLLAGF--SNHLLTLYSRCRLPSAARAVFDEI 63

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
           P   HV+W++++  Y   G    A++ F  M    VP  E     VL+ CA    +  G 
Sbjct: 64  PDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLK-CAP--DVRFGA 120

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFD----MMNDWNEVSWNAMISGY 520
           QVH L V      DV VANAL+ +Y   G + +AR +FD    +  + N VSWN MIS Y
Sbjct: 121 QVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAY 180

Query: 521 SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPC 580
             +  S + + VF  M   G RPN   F  V++AC+    LE G     ++V   G E  
Sbjct: 181 VKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVV-RTGYEKD 239

Query: 581 IEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
           +    ++V +  + G ++ AA + E +P    V+ W A +  C+ H +
Sbjct: 240 VFTANALVDMYSKLGDIEMAATVFEKMP-AADVVSWNAFISGCVTHGH 286



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 115/270 (42%), Gaps = 19/270 (7%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           + N  + A+ L+S   ++ +     +H    K G   D    N L++ Y K  +L  A K
Sbjct: 406 DVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIK 465

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +F E    + IS  T +   +      +A+ LF  + R+G E + F  ++ L    S+  
Sbjct: 466 VFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSA 525

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF--------- 223
            E    V A + K    S+ F G AL+ A++ CG +E A   F GL              
Sbjct: 526 YEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGG 585

Query: 224 -------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
                  + AL+ F +M   G  PN+ T   VL AC     +  AK  +  ++K  + +D
Sbjct: 586 LAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKK-YFESMKETFGID 644

Query: 277 LYVA--VALLDLYTKSGEISNARRIFEEMP 304
                   ++D+  ++G++ +A  +   MP
Sbjct: 645 RTEEHYACMIDILGRAGKLEDAMELVNNMP 674



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 85/189 (44%), Gaps = 17/189 (8%)

Query: 443 TEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVF 502
           T  T  S L    +  +L  G  +H   +K+   +    +N L+ +Y++C   + AR VF
Sbjct: 3   TPETIGSALARFGTSRSLFAGAHLHSHLLKSG--LLAGFSNHLLTLYSRCRLPSAARAVF 60

Query: 503 DMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLE 562
           D + D   VSW+++++ YS +G+  + L  F  M+ RG   N      VL          
Sbjct: 61  DEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAP------ 114

Query: 563 QGEAYFKSMVANYGIEPCIEH----YTSMVSLLGRAGHLDKAAKLIE---GIPFQPSVMI 615
             +  F + V    +   + H      ++V++ G  G +D+A ++ +   G+  + + + 
Sbjct: 115 --DVRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVS 172

Query: 616 WRALLGACI 624
           W  ++ A +
Sbjct: 173 WNTMISAYV 181


>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  542 bits (1397), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 286/755 (37%), Positives = 437/755 (57%), Gaps = 27/755 (3%)

Query: 78   IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
            +HC V+K G   + +  N L+ +Y +  +L  A ++F  M  R+ +S+ + I G      
Sbjct: 283  LHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGF 342

Query: 138  FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
               A+ LF+ + R+  + +     + L    S+G       + +   K G  ++  +  +
Sbjct: 343  SDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGS 402

Query: 198  LIDAFSVCGCVEFARKVFDG-------LFN---------DCFEEALNFFSQMRAVGFKPN 241
            L+D +S C  VE A K F         L+N         D   ++   F QM+  G  PN
Sbjct: 403  LLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPN 462

Query: 242  NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
             FT+  +L+ C  L  + + +  H   +KT +++++YV   L+D+Y K G+++ A RI  
Sbjct: 463  QFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILR 522

Query: 302  EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL 361
             +P+ DV+ W+ MIA Y Q D+  +A++LF  M    +  +   F S + ACA +  L  
Sbjct: 523  RLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQ 582

Query: 362  GNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQ 421
            G QIH+     G  +D+ ++NAL+ +YA+CGR++ +   F +   +N+++WN+++ G  Q
Sbjct: 583  GQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQ 642

Query: 422  LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVV 481
             G   +A+ +F +ML  +      TY S + A ASLA ++ G Q+H + +K  YD +  V
Sbjct: 643  SGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREV 702

Query: 482  ANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW 541
            +N+LI +YAK GSI+DA   F+ M++ N +SWNAMI+GYS HG   E L++F+ M+  G 
Sbjct: 703  SNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGI 762

Query: 542  RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAA 601
             PN++TFVGVLSACS+ GL+++G  YF+SM   + + P  EHY  +V LLGRAG LD+A 
Sbjct: 763  MPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAM 822

Query: 602  KLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMAR 661
            + I+ +P     MIWR LL AC+IH N+EIG  +A H+L+ EPED AT+VL+SNIYA++R
Sbjct: 823  EYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSR 882

Query: 662  SW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSR 710
             W           +    KEPG SWIE +  VH F AGD  H   N I   +  LN ++ 
Sbjct: 883  QWIHRDWSRKLMKDXGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTS 942

Query: 711  KAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHT 770
            + GY+ D  ++L +  + +K+    VHSEKLA+AF L  +  + PIR++KNLR+C DCH 
Sbjct: 943  EIGYVQDSFSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHN 1002

Query: 771  AIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
             IK +SKI  R II+RD HRFHHF  G CSC DFW
Sbjct: 1003 WIKYVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037



 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 174/586 (29%), Positives = 292/586 (49%), Gaps = 21/586 (3%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +Y   L+ C+ +  L   M +HC++ K G   +    + L++ Y +      A K+F
Sbjct: 57  NYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVF 116

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA- 173
           DE   R+  S+   I  +       +   LF  +  EG   N + F   LK  V    A 
Sbjct: 117 DENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAF 176

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GL 218
                V +  +  G DS+  V   LID +S  G +E A+KVF+               GL
Sbjct: 177 NYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGL 236

Query: 219 F-NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
             N   EEA+  F  M A    P  +  + VL A   +    + +  H   +K  +  + 
Sbjct: 237 SQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSET 296

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
           YV   L+ LY++S ++ +A RIF  M  +D + ++ +I+   Q   S  A+ELF +M++ 
Sbjct: 297 YVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRD 356

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            + P+  T  S+L ACA++  L  G Q+HS  ++ G+ +D+ +  +L+D+Y+KC  +E +
Sbjct: 357 CLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETA 416

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
            + F  +   N V WN M+V Y QL  +  +  +F +M  E +   + TY S+LR C SL
Sbjct: 417 HKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSL 476

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
            AL  G Q+H   +K  + ++V V + LIDMYAK G +  A  +   + + + VSW AMI
Sbjct: 477 GALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMI 536

Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEA-YFKSMVANYG 576
           +GY  H + +E L++F+ M+ RG + +N+ F   +SAC+    L QG+  + +S  A +G
Sbjct: 537 AGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFG 596

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
            +  I +  +++SL  R G + +A    E I  + ++  W +L+  
Sbjct: 597 ADLSINN--ALISLYARCGRIQEAYLAFEKIGDKNNIS-WNSLVSG 639



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 195/399 (48%), Gaps = 6/399 (1%)

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           + +NF   M   G + N   + ++L+ CL   ++      H    K+ ++ +  +  +L+
Sbjct: 44  QLMNF---MEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLV 100

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
           D Y + G+   A ++F+E   + V  W+ MI  +     +     LF RM    + PN +
Sbjct: 101 DNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGY 160

Query: 345 TFVSVLQACATME-GLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
           TF  VL+AC   +   +   Q+HS     G  S   V+N L+D+Y+K G +E++ ++F  
Sbjct: 161 TFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNC 220

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
              ++ VTW  MI G  Q G   +A+++F  M   ++  T    SSVL A   +   E G
Sbjct: 221 ICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELG 280

Query: 464 MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMH 523
            Q+HCL +K  +  +  V N L+ +Y++   +  A  +F  MN  + VS+N++ISG    
Sbjct: 281 EQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQ 340

Query: 524 GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEH 583
           G S   L++F  MQ+   +P+ +T   +LSAC++ G L +G     S     G+   I  
Sbjct: 341 GFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKG-MQLHSHAIKAGMSADIIL 399

Query: 584 YTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
             S++ L  +   ++ A K       + ++++W  +L A
Sbjct: 400 EGSLLDLYSKCADVETAHKFFLXTETE-NIVLWNVMLVA 437



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 80/277 (28%), Positives = 131/277 (47%), Gaps = 2/277 (0%)

Query: 328 VELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDV 387
           ++L   M +  V  N   ++ +L+ C T   L    ++H  + + G   +  + ++L+D 
Sbjct: 43  IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102

Query: 388 YAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTY 447
           Y + G    +V++F E+  R+  +WN MI  +V      +   +F +ML E +     T+
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162

Query: 448 SSVLRAC-ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN 506
           + VL+AC     A     QVH  T    +D   +VAN LID+Y+K G I  A+ VF+ + 
Sbjct: 163 AGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCIC 222

Query: 507 DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEA 566
             + V+W AMISG S +GL  E + +F  M      P       VLSA +   L E GE 
Sbjct: 223 MKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQ 282

Query: 567 YFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKL 603
               +V  +G          +V+L  R+  L  A ++
Sbjct: 283 -LHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERI 318



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 130/288 (45%), Gaps = 33/288 (11%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           +F++  +A+++ +C     L+    IH Q    G   DL   N L+++Y +  R+ +A  
Sbjct: 561 QFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYL 620

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
            F+++ ++N IS+ + + G   S  F EA+ +F  + R   E+N F + + +    S+  
Sbjct: 621 AFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLAN 680

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------------- 219
            +    + + V K G+DS   V  +LI  ++  G +  A + F+ +              
Sbjct: 681 IKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITG 740

Query: 220 ---NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL-------GLDTIRVAKSAHGCAL 269
              + C  EAL  F +M+  G  PN+ TF  VL AC        GLD        H    
Sbjct: 741 YSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVP 800

Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIAR 317
           K+    + YV V  +DL  ++G++  A    +EMP    IP   MI R
Sbjct: 801 KS----EHYVCV--VDLLGRAGQLDRAMEYIKEMP----IPADAMIWR 838



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 1/196 (0%)

Query: 427 KAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALI 486
           K + + + M E  V +    Y  +L  C +  +L   M++HC   K+ +D + ++ ++L+
Sbjct: 41  KRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLV 100

Query: 487 DMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNL 546
           D Y + G    A  VFD  ++ +  SWN MI  +     + +V  +F  M   G  PN  
Sbjct: 101 DNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGY 160

Query: 547 TFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEG 606
           TF GVL AC  G +         S    YG +        ++ L  + G+++ A K+   
Sbjct: 161 TFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNC 220

Query: 607 IPFQPSVMIWRALLGA 622
           I  +  ++ W A++  
Sbjct: 221 ICMK-DIVTWVAMISG 235



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 1/138 (0%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           +E N  +Y +++ +     +++    IH  VLK G   +   +N L+++Y K   + DA 
Sbjct: 661 AEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAW 720

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
           + F++M ERN IS+   I GY+     +EA+ LF  +   G   N   F   L     +G
Sbjct: 721 REFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIG 780

Query: 172 WAELCPCVFACVYKLGHD 189
             +     F  ++K+ HD
Sbjct: 781 LVKEGLDYFESMFKI-HD 797


>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 908

 Score =  541 bits (1393), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 300/780 (38%), Positives = 425/780 (54%), Gaps = 30/780 (3%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           NS++Y + L +      L+    +H   +  G  LDL   N L+++Y K   + DA  +F
Sbjct: 130 NSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVF 189

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV--LVSMGW 172
           D M ER+  S+   I G     +  EA  LF  + R G   N   + + L    + S G 
Sbjct: 190 DGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGA 249

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------------- 219
            E    V     K G  S+  VG ALI  ++ CG ++ AR VFDG+              
Sbjct: 250 LEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGG 309

Query: 220 ---NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
              N C  EA   F +M+  GF P++ T+  +L   +        K  H  A++     D
Sbjct: 310 LAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSD 369

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           L V  A + +Y + G I +A+ IF+++  ++V  W+ MI   AQ     +A+ LF +MR+
Sbjct: 370 LRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRR 429

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
               P+  TFV++L A    E L+   ++HS  +  GL+ D+ V NAL+ +YAKCG    
Sbjct: 430 EGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLV-DLRVGNALVHMYAKCGNTMY 488

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           + ++F +  +RN  TW  MI G  Q G   +A  +F +ML E +     TY S+L ACAS
Sbjct: 489 AKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACAS 548

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
             ALE   +VH   V A    D+ V NAL+ MYAKCGS+ DAR VFD M + +  SW  M
Sbjct: 549 TGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVM 608

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           I G + HG   + L +F  M+  G++PN  +FV VLSACS+ GL+++G   F S+  +YG
Sbjct: 609 IGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYG 668

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
           IEP +EHYT MV LLGRAG L++A   I  +P +P    W ALLGAC+ + N+E+   +A
Sbjct: 669 IEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEFAA 728

Query: 637 QHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYF 685
           +  L  +P+  +T+VLLSNIYA   +WE           +   KEPG SWIE    +H F
Sbjct: 729 KERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDNQIHSF 788

Query: 686 RAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAF 745
             GDTSH +   I   L+ L  + +  GY+PD   VLR+  ++ KE+ L  HSEKLA+ +
Sbjct: 789 VVGDTSHPESKEIYAKLKDLIKRLKAEGYVPDTRLVLRNTDQEYKEQALCSHSEKLAIVY 848

Query: 746 ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            L   P  +PIR+ KNLR+C DCHTA K ISK+  REI+ RD  RFHHF+DG CSCGD+W
Sbjct: 849 GLMHTPYRNPIRVYKNLRVCSDCHTATKFISKVTGREIVARDAKRFHHFKDGVCSCGDYW 908



 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 181/591 (30%), Positives = 285/591 (48%), Gaps = 21/591 (3%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +Y + L++C     L+    IH  +++ G   D+     L+N+YVK   + DA  +F
Sbjct: 29  NEITYLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIDDAQLIF 88

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D+M ERN IS+   I G     +  EA   F  + REG   N + + + L    S G  E
Sbjct: 89  DKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALE 148

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN-DCF---------- 223
               V +     G   +  VG AL+  ++  G ++ AR VFDG+   D F          
Sbjct: 149 WVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLA 208

Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDT--IRVAKSAHGCALKTCYEMD 276
                +EA + F QM   G  PN  T+  +L A     T  +   K  H  A K  +  D
Sbjct: 209 QHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISD 268

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           L V  AL+ +Y K G I +AR +F+ M  +DVI W+ MI   AQ     +A  +F +M+Q
Sbjct: 269 LRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQ 328

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
               P+  T++S+L    +    +   ++H   V VGL+SD+ V +A + +Y +CG +++
Sbjct: 329 EGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDD 388

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           +  +F +   RN  TWN MI G  Q     +A+ +F +M  E       T+ ++L A   
Sbjct: 389 AQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVG 448

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
             ALE   +VH   + A   +D+ V NAL+ MYAKCG+   A+ VFD M + N  +W  M
Sbjct: 449 EEALEWVKEVHSYAIDAGL-VDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVM 507

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           ISG + HG   E   +F  M + G  P+  T+V +LSAC++ G LE  +    S   N G
Sbjct: 508 ISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKE-VHSHAVNAG 566

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
           +   +    ++V +  + G +D A ++ + +  +  V  W  ++G    H 
Sbjct: 567 LVSDLRVGNALVHMYAKCGSVDDARRVFDDM-LERDVYSWTVMIGGLAQHG 616



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 163/503 (32%), Positives = 259/503 (51%), Gaps = 22/503 (4%)

Query: 224 EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
           E+A+  +SQMR  G +PN  T+  +LKAC    +++  K  H   +++ ++ D+ V  AL
Sbjct: 12  EDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETAL 71

Query: 284 LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
           +++Y K G I +A+ IF++M +++VI W+ MI   A      +A   F +M++    PN 
Sbjct: 72  VNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNS 131

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
           +T+VS+L A A+   L+   ++HS  V  GL  D+ V NAL+ +YAK G ++++  +F  
Sbjct: 132 YTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDG 191

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA--SLAALE 461
             +R+  +W  MI G  Q G   +A  +F +M          TY S+L A A  S  ALE
Sbjct: 192 MVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALE 251

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
              +VH    KA +  D+ V NALI MYAKCGSI DARLVFD M D + +SWNAMI G +
Sbjct: 252 WVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLA 311

Query: 522 MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
            +G   E   +F  MQQ G+ P++ T++ +L+   + G  E  +   K  V   G+   +
Sbjct: 312 QNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAV-EVGLVSDL 370

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
              ++ V +  R G +D A  + + +  + +V  W A++G        + GR +    L 
Sbjct: 371 RVGSAFVHMYIRCGSIDDAQLIFDKLAVR-NVTTWNAMIGGVA---QQKCGREALSLFLQ 426

Query: 642 FEPE----DEAT--HVLLSNIYAMARSWEKAASK---EPGLSWIE-NQGMVH-YFRAGDT 690
              E    D  T  ++L +N+   A  W K       + GL  +     +VH Y + G+T
Sbjct: 427 MRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLVDLRVGNALVHMYAKCGNT 486

Query: 691 SHA----DMNIIRGMLEWLNMKS 709
            +A    D  + R +  W  M S
Sbjct: 487 MYAKQVFDDMVERNVTTWTVMIS 509



 Score =  232 bits (592), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 143/447 (31%), Positives = 228/447 (51%), Gaps = 24/447 (5%)

Query: 129 IQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVL---VSMGWAELCPCVFACVYK 185
           I GY       +A+ ++S + REG + N   + + LK     VS+ W +    + A + +
Sbjct: 2   IGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKK---IHAHIIQ 58

Query: 186 LGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF----------------EEALNF 229
            G  S+  V TAL++ +  CG ++ A+ +FD +                     +EA + 
Sbjct: 59  SGFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHR 118

Query: 230 FSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK 289
           F QM+  GF PN++T+  +L A      +   K  H  A+     +DL V  AL+ +Y K
Sbjct: 119 FLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAK 178

Query: 290 SGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSV 349
           SG I +AR +F+ M ++D+  W+ MI   AQ     +A  LF +M +    PN  T++S+
Sbjct: 179 SGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSI 238

Query: 350 LQACA--TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKR 407
           L A A  +   L+   ++H    + G +SD+ V NAL+ +YAKCG ++++  +F     R
Sbjct: 239 LNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDR 298

Query: 408 NHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVH 467
           + ++WN MI G  Q G   +A  +F KM +E       TY S+L    S  A E   +VH
Sbjct: 299 DVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVH 358

Query: 468 CLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSA 527
              V+     D+ V +A + MY +CGSI DA+L+FD +   N  +WNAMI G +      
Sbjct: 359 KHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGR 418

Query: 528 EVLKVFDLMQQRGWRPNNLTFVGVLSA 554
           E L +F  M++ G+ P+  TFV +LSA
Sbjct: 419 EALSLFLQMRREGFFPDATTFVNILSA 445



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 149/525 (28%), Positives = 242/525 (46%), Gaps = 49/525 (9%)

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
           MI  YA+   + DA++++ +MR+    PN+ T++S+L+AC +   L  G +IH+ +++ G
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
             SDV V  AL+++Y KCG ++++  +F +  +RN ++W  MI G    G   +A   F 
Sbjct: 61  FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120

Query: 434 KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCG 493
           +M  E       TY S+L A AS  ALE   +VH   V A   +D+ V NAL+ MYAK G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180

Query: 494 SITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL- 552
           SI DAR+VFD M + +  SW  MI G + HG   E   +F  M++ G  PN  T++ +L 
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILN 240

Query: 553 -SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQP 611
            SA ++ G LE  +   K      G    +    +++ +  + G +D A  + +G+    
Sbjct: 241 ASAITSTGALEWVKEVHKH-AGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGM-CDR 298

Query: 612 SVMIWRALLGACIIHNNVEIGRLSAQHILDFEPE----DEATHVLLSNIYAMARSWE--K 665
            V+ W A++G  +  N    G  +    L  + E    D  T++ L N +    +WE  K
Sbjct: 299 DVISWNAMIGG-LAQNGC--GHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVK 355

Query: 666 AASK---EPGLSWIENQG--MVH-YFRAGDTSHA----DMNIIRGMLEW----------- 704
              K   E GL      G   VH Y R G    A    D   +R +  W           
Sbjct: 356 EVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQK 415

Query: 705 -------LNMKSRKAGYIPDLSAVLR----DVREDEKERYLWVHSEKLALAFALFKMPPS 753
                  L ++ R+ G+ PD +  +     +V E+  E    VHS  +       ++  +
Sbjct: 416 CGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLVDLRVGNA 475

Query: 754 SPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGC 798
               ++     C +   A ++   +V+R +    V      Q GC
Sbjct: 476 ----LVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGC 516


>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
          Length = 865

 Score =  540 bits (1391), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 292/782 (37%), Positives = 437/782 (55%), Gaps = 39/782 (4%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L++ I   +L      H +++  G+  D F +N LL +Y K   L  A ++FD  PER+ 
Sbjct: 84  LRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDL 143

Query: 123 ISFVTTIQGYTVS-----SQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
           +++   +  Y  S         E + LF  L               LK+ ++ G      
Sbjct: 144 VTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAE 203

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG-------LFNDCFE------ 224
            V     K+G + + FV  AL++ +S CG +  AR +FD        L+N   +      
Sbjct: 204 GVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLG 263

Query: 225 ---EALNFFSQMRAVGFKPNNFTFAFVLKACL--GLDTIRVAKSAHGCALKTCYEMDLYV 279
              EA   FS+    G +P+ F+   +L  CL  G D + + K  HG A+K+  + D+ V
Sbjct: 264 LEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSV 323

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
           A +L+++Y+K G    AR +F +M   D+I W+ MI+  AQ+ L  ++V LF  +    +
Sbjct: 324 ANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGL 383

Query: 340 APNQFTFVSVL-----QACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
            P+ FT  S+      +AC  +  LD G QIH+  ++ G  SD+ V++ ++D+Y KCG M
Sbjct: 384 KPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDM 443

Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
            N+  +F      + V W +MI G V  G   +A+ ++ +M + +V   E T++++++A 
Sbjct: 444 VNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKAS 503

Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
           + + ALE G Q+H   +K +   D  V  +L+DMYAKCG+I DA  +F  MN  N   WN
Sbjct: 504 SCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWN 563

Query: 515 AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
           AM+ G + HG + E + +F  M+  G  P+ ++F+G+LSACS+ GL  +   Y  SM  +
Sbjct: 564 AMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPND 623

Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL 634
           YGIEP IEHY+ +V  LGRAG + +A K+IE +PF+ S  I RALLGAC I  +VE G+ 
Sbjct: 624 YGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKR 683

Query: 635 SAQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVH 683
            A  +   EP D A +VLLSNIYA A  W+           K   K+PG SWI+ + M+H
Sbjct: 684 VAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLH 743

Query: 684 YFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLAL 743
            F   D SH   +II   +E +    R+ GY+PD   VL DV ++EKER L+ HSEKLA+
Sbjct: 744 LFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAI 803

Query: 744 AFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGD 803
           A+ L   P S+ IR+IKNLR+C DCH AIK ISK+ +REI++RD +RFHHF+DG CSCGD
Sbjct: 804 AYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGD 863

Query: 804 FW 805
           +W
Sbjct: 864 YW 865


>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
          Length = 1106

 Score =  540 bits (1390), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 284/780 (36%), Positives = 432/780 (55%), Gaps = 29/780 (3%)

Query: 54   FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
             N  +Y + L +C  +  L+    IH  + + G+  D+   N L+++Y +   LP A +L
Sbjct: 328  LNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKAREL 387

Query: 114  FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
            F  MP+R+ IS+   I GY       EA+ L+  +  EG +     F   L    +    
Sbjct: 388  FYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAY 447

Query: 174  ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF-------------- 219
                 +   + + G  SN  +  AL++ +  CG +  A+ VF+G                
Sbjct: 448  ADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGH 507

Query: 220  --NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
              +  +E A   F +M+    +P+N TFA VL  C   + + + K  HG   ++  ++D+
Sbjct: 508  AQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDV 567

Query: 278  YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
             +  AL+++Y + G + +AR +F  +  +DV+ W+ MI   A     + A+ELF +M+  
Sbjct: 568  NLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNE 627

Query: 338  FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
               P + TF S+L+ C +   LD G ++ + ++  G   D  V NAL+  Y+K G M ++
Sbjct: 628  GFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDA 687

Query: 398  VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ-VPATEVTYSSVLRACAS 456
             E+F + P R+ V+WN +I GY Q G +G+  + F+  ++EQ V   + ++ S+L AC+S
Sbjct: 688  REVFDKMPSRDIVSWNKIIAGYAQNG-LGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSS 746

Query: 457  LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
             +ALE G +VH   VK     DV V  ALI MYAKCGS  +A+ VFD + + N V+WNAM
Sbjct: 747  FSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAM 806

Query: 517  ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
            I+ Y+ HGL+++ L  F+ M++ G +P+  TF  +LSAC++ GL+ +G   F SM + YG
Sbjct: 807  INAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYG 866

Query: 577  IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
            + P IEHY  +V LLGRA    +A  LI  +PF P   +W  LLGAC IH N+ +   +A
Sbjct: 867  VLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAA 926

Query: 637  QHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYF 685
             + L     + A ++LLSN+YA A  W+  A            KEPG SWIE   ++H F
Sbjct: 927  NNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEF 986

Query: 686  RAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAF 745
             A D SH +   I   L+ L+++  +AGY PD   VL D+ +  +E  L  HSE+LA+A+
Sbjct: 987  IAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAY 1046

Query: 746  ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
             L K PP +PIRI KNLRIC DCHTA K ISK+V REII RD +RFH F++G CSC D+W
Sbjct: 1047 GLIKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHSFKNGKCSCEDYW 1106



 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 177/588 (30%), Positives = 303/588 (51%), Gaps = 18/588 (3%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           +E    +Y   LQ+C +   L  A  IH Q+++     D+F +N+L+N+YVK   + DA 
Sbjct: 23  TETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAH 82

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
           ++F EMP R+ IS+ + I  Y       +A  LF  +   G   N   + + L    S  
Sbjct: 83  QVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPA 142

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF- 223
             E    + + + K G+  +  V  +L+  +  CG +  AR+VF G+       +N    
Sbjct: 143 ELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLG 202

Query: 224 --------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
                   +E L  F QM + G  P+  T+  +L A      +   K  H   ++     
Sbjct: 203 LYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNS 262

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
           D+ V  AL+ +  + G++ +A++ F+    +DV+ ++ +IA  AQ   +++A E + RMR
Sbjct: 263 DIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMR 322

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
              VA N+ T++S+L AC+T + L+ G  IHS +   G  SDV + NAL+ +YA+CG + 
Sbjct: 323 SDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLP 382

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
            + ELF   PKR+ ++WN +I GY +  + G+AM ++ +M  E V    VT+  +L ACA
Sbjct: 383 KARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACA 442

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
           + +A   G  +H   +++    +  +ANAL++MY +CGS+ +A+ VF+     + +SWN+
Sbjct: 443 NSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNS 502

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           MI+G++ HG      K+F  MQ     P+N+TF  VLS C N   LE G+      +   
Sbjct: 503 MIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQ-IHGRITES 561

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGAC 623
           G++  +    +++++  R G L  A  +   +  +  VM W A++G C
Sbjct: 562 GLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHR-DVMSWTAMIGGC 608



 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 166/584 (28%), Positives = 295/584 (50%), Gaps = 18/584 (3%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +Y + L +C    +L+    IH Q++K G   D    N LL++Y K   LP A ++F
Sbjct: 127 NKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVF 186

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             +  R+ +S+ T +  Y   +   E +GLF  +  EG   +   +   L    +    +
Sbjct: 187 AGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLD 246

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG-------LFNDCFE--- 224
               +     + G +S+  VGTAL+     CG V+ A++ F G       ++N       
Sbjct: 247 EGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALA 306

Query: 225 ------EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                 EA   + +MR+ G   N  T+  +L AC     +   K  H    +  +  D+ 
Sbjct: 307 QHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQ 366

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           +  AL+ +Y + G++  AR +F  MPK+D+I W+ +IA YA+ +   +A+ L+ +M+   
Sbjct: 367 IGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEG 426

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           V P + TF+ +L ACA       G  IH  ++R G+ S+  ++NALM++Y +CG +  + 
Sbjct: 427 VKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQ 486

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            +F  +  R+ ++WN+MI G+ Q G    A  +F +M  E++    +T++SVL  C +  
Sbjct: 487 NVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPE 546

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           ALE G Q+H    ++   +DV + NALI+MY +CGS+ DAR VF  +   + +SW AMI 
Sbjct: 547 ALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIG 606

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           G +  G   + +++F  MQ  G+RP   TF  +L  C++   L++G+    + + N G E
Sbjct: 607 GCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVI-AYILNSGYE 665

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
                  +++S   ++G +  A ++ + +P +  ++ W  ++  
Sbjct: 666 LDTGVGNALISAYSKSGSMTDAREVFDKMPSR-DIVSWNKIIAG 708



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 231/454 (50%), Gaps = 18/454 (3%)

Query: 193 FVGTALIDAFSVCGCVEFARKVFDGL----------FNDCF------EEALNFFSQMRAV 236
           F+   LI+ +  C  V  A +VF  +             C+      ++A   F +M+  
Sbjct: 63  FLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNA 122

Query: 237 GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNA 296
           GF PN  T+  +L AC     +   K  H   +K  Y+ D  V  +LL +Y K G++  A
Sbjct: 123 GFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRA 182

Query: 297 RRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM 356
           R++F  +  +DV+ ++ M+  YAQ     + + LF +M    ++P++ T++++L A  T 
Sbjct: 183 RQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTP 242

Query: 357 EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMI 416
             LD G +IH L V  GL SD+ V  AL+ +  +CG ++++ + F  +  R+ V +N +I
Sbjct: 243 SMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALI 302

Query: 417 VGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD 476
               Q G   +A   + +M  + V     TY S+L AC++  ALE G  +H    +  + 
Sbjct: 303 AALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHS 362

Query: 477 MDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLM 536
            DV + NALI MYA+CG +  AR +F  M   + +SWNA+I+GY+      E ++++  M
Sbjct: 363 SDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQM 422

Query: 537 QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGH 596
           Q  G +P  +TF+ +LSAC+N      G+   + ++ + GI+       +++++  R G 
Sbjct: 423 QSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRS-GIKSNGHLANALMNMYRRCGS 481

Query: 597 LDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
           L +A  + EG   +  V+ W +++     H + E
Sbjct: 482 LMEAQNVFEGTQAR-DVISWNSMIAGHAQHGSYE 514


>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score =  538 bits (1386), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 284/770 (36%), Positives = 448/770 (58%), Gaps = 38/770 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  ++++ L++C    DL+    +H  V+  G   D+F  N L+ +Y K +   D+ +LF
Sbjct: 156 NEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLF 215

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           DE+PERN +S+      Y       EAVGLF  +   G + N F+ ++ +     +  + 
Sbjct: 216 DEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSS 275

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMR 234
               +   + KLG+D + F   AL+D ++         KV D        +A++ F +++
Sbjct: 276 RGKIIHGYLIKLGYDWDPFSANALVDMYA---------KVGD------LADAISVFEKIK 320

Query: 235 AVGFKPNNFTFAFVLKACL-------GLDTI-RVAKSAHGCALKTCYEMDLYVAVALLDL 286
               +P+  ++  V+  C+        L+ + ++ +  H   +K   E DL+V+V L+D+
Sbjct: 321 ----QPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDM 376

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y+K   + +AR  F  +P+KD+I W+ +I+ Y+Q    ++A+ LF  M +  +  NQ T 
Sbjct: 377 YSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTL 436

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
            ++L++ A ++ + +  Q+H L V+ G  SD++V N+L+D Y KC  +E++  +F E   
Sbjct: 437 STILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTI 496

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
            + V++ +MI  Y Q G+  +A+ +F +M + ++       SS+L ACA+L+A E G Q+
Sbjct: 497 GDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQL 556

Query: 467 HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLS 526
           H   +K  + +D+   N+L++MYAKCGSI DA   F  + +   VSW+AMI G + HG  
Sbjct: 557 HVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHG 616

Query: 527 AEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTS 586
            + L++F+ M + G  PN++T V VL AC++ GL+ + + YF+SM   +G +P  EHY  
Sbjct: 617 RQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYAC 676

Query: 587 MVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPED 646
           M+ LLGRAG +++A +L+  +PF+ +  +W ALLGA  IH +VE+GR +A+ +   EPE 
Sbjct: 677 MIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEK 736

Query: 647 EATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADM 695
             THVLL+NIYA A  WE  A            KEPG+SWIE +  V+ F  GD SH   
Sbjct: 737 SGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRS 796

Query: 696 NIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSP 755
             I   L+ L+    KAGY+P +   L DV + EKE  L+ HSEKLA+AF L   P  +P
Sbjct: 797 QEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIATPQGAP 856

Query: 756 IRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           IR+ KNLR+CVDCHTA K I KIV REII+RD++RFHHF+DG CSCGD+W
Sbjct: 857 IRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 906



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 174/621 (28%), Positives = 298/621 (47%), Gaps = 52/621 (8%)

Query: 37  QQCSNSTTTPITFSVSEFN----SHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLF 92
           Q   +  TT I   + + N    S SY+  L  C     L+  + IH  + K G   D  
Sbjct: 33  QFSEDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPS 92

Query: 93  ATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREG 152
             N L+N+Y K      A KL DE  E + +S+   I GY  +     A+  F  +H  G
Sbjct: 93  IRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLG 152

Query: 153 HELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFAR 212
            + N F F++ LK    +    +   V   V   G + + FV   L+  ++ C     ++
Sbjct: 153 VKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSK 212

Query: 213 KVFD-----------GLFN-----DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLD 256
           ++FD            LF+     D   EA+  F +M   G KPN F+ + ++ AC GL 
Sbjct: 213 RLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLR 272

Query: 257 TIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIA 316
                K  HG  +K  Y+ D + A AL+D+Y K G++++A  +FE++ + D++ W+ +IA
Sbjct: 273 DSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIA 332

Query: 317 RYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLS 376
                +    A+EL  +M++                           Q+HS ++++ + S
Sbjct: 333 GCVLHEHHEQALELLGQMKR---------------------------QLHSSLMKMDMES 365

Query: 377 DVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML 436
           D+FVS  L+D+Y+KC  +E++   F   P+++ + WN +I GY Q  E  +A+ +F +M 
Sbjct: 366 DLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMH 425

Query: 437 EEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSIT 496
           +E +   + T S++L++ A L  +    QVH L+VK+ +  D+ V N+LID Y KC  + 
Sbjct: 426 KEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVE 485

Query: 497 DARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS 556
           DA  +F+     + VS+ +MI+ Y+ +G   E LK+F  MQ    +P+      +L+AC+
Sbjct: 486 DAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACA 545

Query: 557 NGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIW 616
           N    EQG+      +  YG    I    S+V++  + G +D A +    +  +  ++ W
Sbjct: 546 NLSAFEQGKQ-LHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELT-ERGIVSW 603

Query: 617 RALLGACIIHNNVEIGRLSAQ 637
            A++G    H +   GR + Q
Sbjct: 604 SAMIGGLAQHGH---GRQALQ 621



 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 138/513 (26%), Positives = 248/513 (48%), Gaps = 76/513 (14%)

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG----------------LFNDC 222
           + A + K G   +  +   LI+ +S C    +ARK+ D                   N  
Sbjct: 78  IHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGL 137

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
              AL  F +M  +G K N FTF+ VLKAC  +  +R+ K  HG  + + +E D++VA  
Sbjct: 138 GGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANT 197

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+ +Y K  E  +++R+F+E+P+++V+ W+ + + Y Q D   +AV LF  M  + + PN
Sbjct: 198 LVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPN 257

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           +F+  S++ AC  +     G  IH  ++++G   D F +NAL+D+YAK G + +++ +F 
Sbjct: 258 EFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFE 317

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
           +  + + V+WN +I G V      +A+ +  +M                           
Sbjct: 318 KIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKR------------------------- 352

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
             Q+H   +K + + D+ V+  L+DMY+KC  + DAR+ F+++ + + ++WNA+ISGYS 
Sbjct: 353 --QLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQ 410

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS-----------NGGLLEQG---EAY- 567
           +    E L +F  M + G   N  T   +L + +           +G  ++ G   + Y 
Sbjct: 411 YWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYV 470

Query: 568 FKSMVANYG-----------IEPC----IEHYTSMVSLLGRAGHLDKAAKL---IEGIPF 609
             S++ +YG            E C    +  +TSM++   + G  ++A KL   ++ +  
Sbjct: 471 VNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMEL 530

Query: 610 QPSVMIWRALLGACIIHNNVEIGRLSAQHILDF 642
           +P   +  +LL AC   +  E G+    HIL +
Sbjct: 531 KPDRFVCSSLLNACANLSAFEQGKQLHVHILKY 563



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 118/274 (43%), Gaps = 29/274 (10%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
           FN  + +T L+S      +     +H   +K G   D++  N L++ Y K + + DA ++
Sbjct: 431 FNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERI 490

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNP--FAFTAFLKVLVSMG 171
           F+E    + +SF + I  Y    Q  EA+ LF  L  +  EL P  F  ++ L    ++ 
Sbjct: 491 FEECTIGDLVSFTSMITAYAQYGQGEEALKLF--LEMQDMELKPDRFVCSSLLNACANLS 548

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF-------- 223
             E    +   + K G   + F G +L++ ++ CG ++ A + F  L             
Sbjct: 549 AFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIG 608

Query: 224 --------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
                    +AL  F+QM   G  PN+ T   VL AC     +  AK       ++  E+
Sbjct: 609 GLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAK----LYFESMEEL 664

Query: 276 DLYVAVA-----LLDLYTKSGEISNARRIFEEMP 304
             +  +      ++DL  ++G+I+ A  +  +MP
Sbjct: 665 FGFKPMQEHYACMIDLLGRAGKINEAVELVNKMP 698


>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
          Length = 1161

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 281/779 (36%), Positives = 429/779 (55%), Gaps = 27/779 (3%)

Query: 54   FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
             N  +Y + L +C  +  L     IH  + + G+  D+   N L+++Y +   LP A +L
Sbjct: 383  MNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRAREL 442

Query: 114  FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
            F+ MP+R+ IS+   I GY       EA+ L+  +  EG +     F   L    +    
Sbjct: 443  FNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAY 502

Query: 174  ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF-------------- 219
                 +   + + G  SN  +  AL++ +  CG +  A+ VF+G                
Sbjct: 503  SDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGH 562

Query: 220  --NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
              +  +E A   F +M+  G +P+  TFA VL  C   + + + +  H   +++  ++D+
Sbjct: 563  AQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDV 622

Query: 278  YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
             +  AL+++Y + G + +A  +F  +  ++V+ W+ MI  +A       A ELF +M+  
Sbjct: 623  NLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQND 682

Query: 338  FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
               P + TF S+L+AC +   LD G ++ + ++  G   D  V NAL+  Y+K G M ++
Sbjct: 683  GFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDA 742

Query: 398  VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
             ++F + P R+ ++WN MI GY Q G  G A+    +M E+ V   + ++ S+L AC+S 
Sbjct: 743  RKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSF 802

Query: 458  AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
            +ALE G +VH   VK     DV V  ALI MYAKCGS+ +A+ VFD   + N V+WNAMI
Sbjct: 803  SALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMI 862

Query: 518  SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
            + Y+ HGL+++ L  F+ M + G +P+  TF  +LSAC++ GL+ +G   F S+ + +G+
Sbjct: 863  NAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGL 922

Query: 578  EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQ 637
             P IEHY  +V LLGRAG   +A  LI  +PF P   +W  LLGAC IH NV +   +A 
Sbjct: 923  SPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAAN 982

Query: 638  HILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFR 686
            + L     + A +VLLSN+YA A  W+  A            KEPG SWIE   ++H F 
Sbjct: 983  NALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFI 1042

Query: 687  AGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFA 746
            A D SH +   I   L+ L+++  +AGY PD   VL ++ ++ +E  L  HSE+LA+A+ 
Sbjct: 1043 AADRSHPETAEIYEELKRLSLEMERAGYSPDTQYVLHNLDKEHQETSLCTHSERLAIAYG 1102

Query: 747  LFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            L K PP +PIRI KNLRIC DCHTA K ISK+V REII RD +RFH F++G CSC DFW
Sbjct: 1103 LLKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHTFKNGKCSCEDFW 1161



 Score =  291 bits (745), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 170/587 (28%), Positives = 300/587 (51%), Gaps = 18/587 (3%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           +E N  +Y   +Q+C +   L  A  IH Q+++ G   D+F +N+L+N+YVK   + DA 
Sbjct: 78  TETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAH 137

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
           ++F +MP R+ IS+ + I  Y       +A  LF  +   G   +   + + L    S  
Sbjct: 138 QVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPA 197

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND---------- 221
             E    + + + + G+  +  V  +L++ +  C  +  AR+VF G++            
Sbjct: 198 ELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLG 257

Query: 222 ------CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
                   EE +  F QM + G  P+  T+  +L A      +   K  H  A+      
Sbjct: 258 LYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNS 317

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
           D+ V  AL  ++ + G+++ A++  E    +DV+ ++ +IA  AQ     +A E + +MR
Sbjct: 318 DIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMR 377

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
              V  N+ T++SVL AC+T + L  G  IHS +  VG  SDV + N+L+ +YA+CG + 
Sbjct: 378 SDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLP 437

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
            + ELF   PKR+ ++WN +I GY +  + G+AM ++ +M  E V    VT+  +L AC 
Sbjct: 438 RARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACT 497

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
           + +A   G  +H   +++    +  +ANAL++MY +CGSI +A+ VF+     + +SWN+
Sbjct: 498 NSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNS 557

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           MI+G++ HG      K+F  M++ G  P+ +TF  VL  C N   LE G      ++   
Sbjct: 558 MIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQ-IHMLIIES 616

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           G++  +    +++++  R G L  A ++   +  + +VM W A++G 
Sbjct: 617 GLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHR-NVMSWTAMIGG 662



 Score =  289 bits (740), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 167/581 (28%), Positives = 296/581 (50%), Gaps = 18/581 (3%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +Y + L +C    +L+    IH ++++ G   D    N LLN+Y K   LP A ++F  +
Sbjct: 185 TYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGI 244

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
             R+ +S+ T +  Y   +   E +GLF  +  EG   +   +   L    +    +   
Sbjct: 245 YRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGK 304

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARK-----------VFDGLF-----ND 221
            +       G +S+  VGTAL   F  CG V  A++           V++ L      + 
Sbjct: 305 RIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHG 364

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
            +EEA   + QMR+ G   N  T+  VL AC     +   +  H    +  +  D+ +  
Sbjct: 365 HYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGN 424

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           +L+ +Y + G++  AR +F  MPK+D+I W+ +IA YA+ +   +A++L+ +M+   V P
Sbjct: 425 SLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKP 484

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
            + TF+ +L AC        G  IH  ++R G+ S+  ++NALM++Y +CG +  +  +F
Sbjct: 485 GRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVF 544

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
             +  R+ ++WN+MI G+ Q G    A  +F +M +E +   ++T++SVL  C +  ALE
Sbjct: 545 EGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALE 604

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
            G Q+H L +++   +DV + NALI+MY +CGS+ DA  VF  +   N +SW AMI G++
Sbjct: 605 LGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFA 664

Query: 522 MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
             G   +  ++F  MQ  G++P   TF  +L AC +   L++G+    + + N G E   
Sbjct: 665 DQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVI-AHILNSGYELDT 723

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
               +++S   ++G +  A K+ + +P +  +M W  ++  
Sbjct: 724 GVGNALISAYSKSGSMTDARKVFDKMPNR-DIMSWNKMIAG 763



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 128/468 (27%), Positives = 234/468 (50%), Gaps = 18/468 (3%)

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------FNDCF----- 223
           + A + + G   + F+   LI+ +  C  V  A +VF  +             C+     
Sbjct: 104 IHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGF 163

Query: 224 -EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
            ++A   F +M+  GF P+  T+  +L AC     +   K  H   ++  Y+ D  V  +
Sbjct: 164 KKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNS 223

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           LL++Y K  ++ +AR++F  + ++DV+ ++ M+  YAQ     + + LF +M    + P+
Sbjct: 224 LLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPD 283

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           + T++++L A  T   LD G +IH L V  GL SD+ V  AL  ++ +CG +  + +   
Sbjct: 284 KVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALE 343

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
               R+ V +N +I    Q G   +A   + +M  + V     TY SVL AC++  AL  
Sbjct: 344 AFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGA 403

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G  +H    +  +  DV + N+LI MYA+CG +  AR +F+ M   + +SWNA+I+GY+ 
Sbjct: 404 GELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYAR 463

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
                E +K++  MQ  G +P  +TF+ +LSAC+N      G+   + ++ + GI+    
Sbjct: 464 REDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRS-GIKSNGH 522

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
              +++++  R G + +A  + EG   +  ++ W +++     H + E
Sbjct: 523 LANALMNMYRRCGSIMEAQNVFEGTRAR-DIISWNSMIAGHAQHGSYE 569


>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
          Length = 837

 Score =  537 bits (1383), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 291/802 (36%), Positives = 434/802 (54%), Gaps = 27/802 (3%)

Query: 31  QAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLD 90
           ++  + Q  +N     +    +  +S +Y    Q C+   D      +   +++ G  L+
Sbjct: 36  RSIFTGQVGANDVLHRLGEGSNHIDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLN 95

Query: 91  LFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHR 150
           ++  N L+ ++     + +A + FD +  +  +++   I GY       EA  LF  +  
Sbjct: 96  IYELNTLIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVD 155

Query: 151 EGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEF 210
           E  E +   F   L    S    +L     A V K+G  S+  +GTAL+  +   G ++ 
Sbjct: 156 EAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDG 215

Query: 211 ARKVFDGLFNDCF----------------EEALNFFSQMRAVGFKPNNFTFAFVLKACLG 254
           AR+VFDGL+                    E+A   F +M+  GFKPN  +F  +L  C  
Sbjct: 216 ARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCST 275

Query: 255 LDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFM 314
            + +   K+ H   + T    D+ VA AL+ +Y   G I  ARR+F++M  +DV+ W+ M
Sbjct: 276 PEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVM 335

Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL 374
           I  YA+     DA  LF  M++  + P++ T++ ++ ACA+   L L  +IHS VVR G 
Sbjct: 336 IRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGF 395

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
            +D+ V  AL+ +YAKCG ++++ ++F    +R+ V+W+ MI  YV+ G   +A   F  
Sbjct: 396 GTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHL 455

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGS 494
           M    V    VTY ++L AC  L AL+ GM+++   +KA+    + V NALI+M  K GS
Sbjct: 456 MKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGS 515

Query: 495 ITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSA 554
           I  AR +F+ M   + V+WN MI GYS+HG + E L +FD M +  +RPN++TFVGVLSA
Sbjct: 516 IERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSA 575

Query: 555 CSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVM 614
           CS  G +E+G  +F  ++   GI P +E Y  MV LLGRAG LD+A  LI  +P +P+  
Sbjct: 576 CSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSS 635

Query: 615 IWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS------ 668
           IW  LL AC I+ N+++   +A+  L  EP D A +V LS++YA A  WE  A       
Sbjct: 636 IWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVME 695

Query: 669 -----KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLR 723
                KE G +WIE +G +H F   D SH     I   L  L    ++ GYIP    VL 
Sbjct: 696 SRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAELARLMTAIKREGYIPVTQNVLH 755

Query: 724 DVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREI 783
           +V E EKE  +  HSEKLA+A+ +  +P  +PIRI KNLR+C DCH+A K ISK+  REI
Sbjct: 756 NVGEQEKEEAISYHSEKLAIAYGVLSLPSGAPIRIFKNLRVCGDCHSASKFISKVTGREI 815

Query: 784 IIRDVHRFHHFQDGCCSCGDFW 805
           I RD  RFHHF++G CSCGD+W
Sbjct: 816 IARDASRFHHFKNGVCSCGDYW 837


>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 833

 Score =  537 bits (1383), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 290/781 (37%), Positives = 430/781 (55%), Gaps = 27/781 (3%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           +  +S +Y    Q C +  D      +   +++ G  L+++  N L+ +Y     + +A 
Sbjct: 53  NHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEAR 112

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
           ++FD +  +  +++   I GY       EA  LF  +  EG E +   F + L    S  
Sbjct: 113 QIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPA 172

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FN---- 220
                  V A V   G  S+  +GTAL+  +   G ++ AR+VFDGL       FN    
Sbjct: 173 GLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVG 232

Query: 221 -----DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
                  +E+A   F +M+ VG KPN  +F  +L  C   + +   K+ H   +      
Sbjct: 233 GYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVD 292

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
           D+ VA +L+ +YT  G I  ARR+F+ M  +DV+ W+ MI  YA+     DA  LF  M+
Sbjct: 293 DIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQ 352

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
           +  + P++ T++ ++ ACA    L+   +IHS V   G  +D+ VS AL+ +YAKCG ++
Sbjct: 353 EEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIK 412

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
           ++ ++F   P+R+ V+W+ MI  YV+ G   +A   F  M    +    VTY ++L AC 
Sbjct: 413 DARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACG 472

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
            L AL+ GM+++   +KA+    V + NALI M AK GS+  AR +FD M   + ++WNA
Sbjct: 473 HLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNA 532

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           MI GYS+HG + E L +FD M +  +RPN++TFVGVLSACS  G +++G  +F  ++   
Sbjct: 533 MIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGR 592

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS 635
           GI P ++ Y  MV LLGRAG LD+A  LI+ +P +P+  IW +LL AC IH N+++   +
Sbjct: 593 GIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERA 652

Query: 636 AQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHY 684
           A+  L  +P D A +V LS++YA A  WE  A            KE G +WIE  G VH 
Sbjct: 653 AERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGCTWIEVAGKVHT 712

Query: 685 FRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALA 744
           F   D SH  +  I   L  L    ++ GYIP    VL DV E +KE  +  HSEKLA+A
Sbjct: 713 FVVEDRSHPLVGEIYAELARLMNAIKREGYIPITQNVLHDVGEQQKEEAISYHSEKLAIA 772

Query: 745 FALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
           + +  +P  +PIRI KNLR+C DCH+A K ISK+  REII RD  RFHHF+DG CSCGD+
Sbjct: 773 YGVLSLPSGTPIRIYKNLRVCSDCHSASKFISKVTGREIIARDASRFHHFKDGVCSCGDY 832

Query: 805 W 805
           W
Sbjct: 833 W 833


>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Glycine max]
          Length = 1227

 Score =  536 bits (1382), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 289/782 (36%), Positives = 434/782 (55%), Gaps = 29/782 (3%)

Query: 52   SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
            SE + ++Y++ LQ C ++  LQ    +H  +   G  ++      L+ +YV    L +  
Sbjct: 447  SELDLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGR 506

Query: 112  KLFDEMPERNTISFVTTIQG-YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSM 170
            ++FD +   N +     +   Y     + E++ LF  + + G   N + F+  LK   ++
Sbjct: 507  RIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATL 566

Query: 171  GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL------------ 218
            G    C  +  CVYKLG  S   V  +LI  +   G V+ A K+FD L            
Sbjct: 567  GRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMI 626

Query: 219  ----FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
                 N     AL FF QM  +    +  T    + AC  + ++ + ++ HG  +K C+ 
Sbjct: 627  SGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFS 686

Query: 275  MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
             ++     LLD+Y+K G +++A + FE+M +K V+ W+ +IA Y +  L  DA+ LF  M
Sbjct: 687  REVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEM 746

Query: 335  RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
                V+P+ ++  SVL ACA    LD G  +H+ + +  +   + VSNALMD+YAKCG M
Sbjct: 747  ESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSM 806

Query: 395  ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
            E +  +F++ P ++ V+WNTMI GY +     +A+ +F++M +E  P   +T + +L AC
Sbjct: 807  EEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKESRPDG-ITMACLLPAC 865

Query: 455  ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
             SLAALE G  +H   ++  Y  ++ VANALIDMY KCGS+  ARL+FDM+ + + ++W 
Sbjct: 866  GSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWT 925

Query: 515  AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
             MISG  MHGL  E +  F  M+  G +P+ +TF  +L ACS+ GLL +G  +F SM++ 
Sbjct: 926  VMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISE 985

Query: 575  YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL 634
              +EP +EHY  MV LL R G+L KA  LIE +P +P   IW ALL  C IH++VE+   
Sbjct: 986  CNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEK 1045

Query: 635  SAQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVH 683
             A+H+ + EP++   +VLL+NIYA A  WE           +   K PG SWIE QG   
Sbjct: 1046 VAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQGKFT 1105

Query: 684  YFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLAL 743
             F + DT+H     I  +L  L +K +  G+ P +   L +  + EKE  L  HSEKLA+
Sbjct: 1106 TFVSADTAHPQAKSIFSLLNNLRIKMKNEGHSPKMRYALINAGDMEKEVALCGHSEKLAM 1165

Query: 744  AFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGD 803
            AF +  +P    IR+ KNLR+C DCH   K +SK  +REII+RD +RFHHF+DG CSC D
Sbjct: 1166 AFGILNLPSGRTIRVAKNLRVCDDCHEMAKFMSKTTRREIILRDSNRFHHFKDGFCSCRD 1225

Query: 804  FW 805
            FW
Sbjct: 1226 FW 1227


>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
            [Vitis vinifera]
          Length = 1005

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 285/764 (37%), Positives = 433/764 (56%), Gaps = 32/764 (4%)

Query: 71   DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQ 130
            +++   +IH  V ++        +N L+++Y K   +  A ++FD+M +++ +S+ T + 
Sbjct: 245  NIELCRSIHGYVFRRD--FSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMA 302

Query: 131  GYTVSSQFVEAVGLFSTLHREGHELNPF-AFTAFLKVLVSMGWAELCPCVFACVYKLGHD 189
            GY  +  FVE + LF  +      +N   A +AFL    ++   E    +  C  +   D
Sbjct: 303  GYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDL-EKGKEIHGCALQQRID 361

Query: 190  SNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF----------------EEALNFFSQM 233
            S+  V T L+  ++ CG  E A+++F GL                     EEAL+ F +M
Sbjct: 362  SDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEM 421

Query: 234  RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
            +    KPN  T   +L AC  L  +++ KS H   +K   + DL    AL+ +Y K G  
Sbjct: 422  QNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFF 481

Query: 294  SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
            + A   F  M  +D++ W+ +I  YAQ     +A+++F ++R + + P+  T V V+ AC
Sbjct: 482  TAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPAC 541

Query: 354  ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTW 412
            A +  LD G  IH L+V++G  SD  V NAL+D+YAKCG + ++  LF ++   ++ VTW
Sbjct: 542  ALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTW 601

Query: 413  NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
            N +I  Y+Q G   +A+  F +M  E      VT+ SVL A A LAA   GM  H   ++
Sbjct: 602  NVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQ 661

Query: 473  ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
              +  + +V N+LIDMYAKCG +  +  +F+ M+  + VSWNAM+SGY++HG     + +
Sbjct: 662  MGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIAL 721

Query: 533  FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
            F LMQ+   + ++++FV VLSAC + GL+E+G   F SM   Y I+P +EHY  MV LLG
Sbjct: 722  FSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLG 781

Query: 593  RAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVL 652
            RAG  D+    I+ +P +P   +W ALLG+C +H+NV++G ++  H++  EP + A  V+
Sbjct: 782  RAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVV 841

Query: 653  LSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGM 701
            LS+IYA +  W  A             K PG SW+E +  VH FR GD SH  +  +  +
Sbjct: 842  LSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLL 901

Query: 702  LEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKN 761
               L  K  K GY+PD S VL++V E++KE +L+ HSE+LA+ FAL   PP S I+I+KN
Sbjct: 902  WNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKN 961

Query: 762  LRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            LR+C DCHT  K ISKI  R II+RD  RFHHF+DG CSC D+W
Sbjct: 962  LRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005



 Score =  298 bits (764), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 181/593 (30%), Positives = 298/593 (50%), Gaps = 21/593 (3%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E + +++   L++C    +LQ  +  H ++ ++G   D+F    L+++Y K+  L  A +
Sbjct: 126 EPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRARE 185

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +FD+MP+R+ +++   I G + S    EAV  F ++   G E +  +       +  +  
Sbjct: 186 VFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSN 245

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------------- 219
            ELC  +   V++   D ++ V   LID +S CG V+ AR+VFD +              
Sbjct: 246 IELCRSIHGYVFR--RDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAG 303

Query: 220 ---NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
              N CF E L  F +M+    + N  +      A      +   K  HGCAL+   + D
Sbjct: 304 YAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSD 363

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           + VA  L+ +Y K GE   A+++F  +  +D++ WS +IA   QT    +A+ LF  M+ 
Sbjct: 364 ILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQN 423

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             + PN+ T +S+L ACA +  L LG  IH   V+  + SD+    AL+ +YAKCG    
Sbjct: 424 QKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTA 483

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           ++  F     R+ VTWN++I GY Q+G+   A+ MF K+    +     T   V+ ACA 
Sbjct: 484 ALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACAL 543

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN-DWNEVSWNA 515
           L  L+ G  +H L VK  ++ D  V NALIDMYAKCGS+  A  +F+  +   +EV+WN 
Sbjct: 544 LNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNV 603

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           +I+ Y  +G + E +  F  M+   + PN++TFV VL A +      +G A F + +   
Sbjct: 604 IIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMA-FHACIIQM 662

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
           G         S++ +  + G LD + KL   +  + +V  W A+L    +H +
Sbjct: 663 GFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVS-WNAMLSGYAVHGH 714



 Score =  266 bits (681), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 180/629 (28%), Positives = 301/629 (47%), Gaps = 38/629 (6%)

Query: 45  TPITFSVSEFNSHS---------YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATN 95
           T I  + SEF S S         Y   L SC     L   + IH Q++  G       T+
Sbjct: 12  TSIATAASEFPSLSSSTYTNYLHYPRLLSSCKH---LNPLLQIHAQIIVSGFKHHHSITH 68

Query: 96  VLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHEL 155
            L+N+Y   ++   A  +FD  P  + I + + I+ YT S Q+ EA+ ++  +  +G E 
Sbjct: 69  -LINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEP 127

Query: 156 NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF 215
           + + FT  LK        +        + + G + + F+G  L+D +S  G ++ AR+VF
Sbjct: 128 DKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVF 187

Query: 216 DGL------------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDT 257
           D +                   + C  EA++FF  M+ VG +P++ +   +      L  
Sbjct: 188 DKMPKRDVVAWNAMIAGLSQSEDPC--EAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSN 245

Query: 258 IRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIAR 317
           I + +S HG   +   +    V+  L+DLY+K G++  ARR+F++M  +D + W  M+A 
Sbjct: 246 IELCRSIHGYVFRR--DFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAG 303

Query: 318 YAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD 377
           YA     ++ +ELF +M+   V  N+ + VS   A A    L+ G +IH   ++  + SD
Sbjct: 304 YAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSD 363

Query: 378 VFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
           + V+  LM +YAKCG  E + +LF     R+ V W+ +I   VQ G   +A+ +F +M  
Sbjct: 364 ILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQN 423

Query: 438 EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITD 497
           +++    VT  S+L ACA L+ L+ G  +HC TVKA+ D D+    AL+ MYAKCG  T 
Sbjct: 424 QKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTA 483

Query: 498 ARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSN 557
           A   F+ M+  + V+WN++I+GY+  G     + +F  ++     P+  T VGV+ AC+ 
Sbjct: 484 ALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACAL 543

Query: 558 GGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWR 617
              L+QG      ++   G E       +++ +  + G L  A  L     F    + W 
Sbjct: 544 LNDLDQGTC-IHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWN 602

Query: 618 ALLGACII--HNNVEIGRLSAQHILDFEP 644
            ++ A +   H    I       + +F P
Sbjct: 603 VIIAAYMQNGHAKEAISSFHQMRLENFHP 631



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 13/174 (7%)

Query: 4   LFNYKTFSCKQLTHQSKINAWLRGLSAQAALST---QQCSNSTTTPITFSVSEFNSHSYA 60
           LFN   F+  ++T    I A+++   A+ A+S+    +  N     +TF VS   + +Y 
Sbjct: 588 LFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTF-VSVLPAAAYL 646

Query: 61  TSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPER 120
            + +           M  H  +++ G   +    N L+++Y K  +L  + KLF+EM  +
Sbjct: 647 AAFRE---------GMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHK 697

Query: 121 NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           +T+S+   + GY V      A+ LFS +     +++  +F + L      G  E
Sbjct: 698 DTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVE 751


>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  534 bits (1375), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 280/782 (35%), Positives = 454/782 (58%), Gaps = 34/782 (4%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +Y+  L+SCI+  + Q    +H ++++ G  LD    N L+++Y K      A  +F+ M
Sbjct: 28  TYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGM 87

Query: 118 P-ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
             +R+ +S+   +  +  +S   +A+  F  +   G   N + F A ++   +  +A + 
Sbjct: 88  GNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVG 147

Query: 177 PCVFACVYKLGH-DSNAFVGTALIDAF-SVCGCVEFARKVFDGLFN-------------- 220
             ++  V K G+ +++  VG  LID F    G +  A KVFD +                
Sbjct: 148 EIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFA 207

Query: 221 --DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
              C  +A++ F  M   G+ P+ FT++ VL AC  L  + + K  H   ++    +D+ 
Sbjct: 208 QLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVC 267

Query: 279 VAVALLDLYTK---SGEISNARRIFEEMPKKDVIPWSFMIARYAQT-DLSIDAVELFCRM 334
           V  +L+D+Y K    G + ++R++FE+MP+ +V+ W+ +I  Y Q+ +   +A+ELFC+M
Sbjct: 268 VGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKM 327

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
               + PN F+F SVL+AC  +     G Q++S  V++G+ S   V N+L+ +YA+ GRM
Sbjct: 328 ISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRM 387

Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
           E++ + F    ++N V++N ++ GY +  +  +A ++F+++ +  +  +  T++S+L   
Sbjct: 388 EDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGA 447

Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
           AS+ A+  G Q+H   +K  Y  +  + NALI MY++CG+I  A  VF+ M D N +SW 
Sbjct: 448 ASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWT 507

Query: 515 AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
           +MI+G++ HG +   L++F  M + G +PN +T+V VLSACS+ G++ +G+ +F SM   
Sbjct: 508 SMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKE 567

Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL 634
           +GI P +EHY  MV LLGR+G L +A + I  +P     ++WR LLGAC +H N E+GR 
Sbjct: 568 HGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRH 627

Query: 635 SAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVH 683
           +A+ IL+ EP+D A ++LLSN++A A  W           E+   KE G SWIE +  VH
Sbjct: 628 AAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVH 687

Query: 684 YFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLAL 743
            F  G+TSH     I   L+ L  K ++ GYIPD   VL D+ E++KE++L+ HSEK+A+
Sbjct: 688 RFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAV 747

Query: 744 AFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGD 803
           AF L     S PIRI KNLR+C DCHTAIK IS    REI++RD +RFHH ++G CSC D
Sbjct: 748 AFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCND 807

Query: 804 FW 805
           +W
Sbjct: 808 YW 809



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 133/402 (33%), Positives = 215/402 (53%), Gaps = 14/402 (3%)

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           L+  +Q  A    P+  T++ +LK+C+     ++ K  H   +++  E+D  V   L+ L
Sbjct: 14  LDLMTQQNA---PPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISL 70

Query: 287 YTKSGEISNARRIFEEMP-KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFT 345
           Y+K G+   AR IFE M  K+D++ WS M++ +A   +   A+  F  M +    PN++ 
Sbjct: 71  YSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYC 130

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLL-SDVFVSNALMDVYAK-CGRMENSVELFAE 403
           F +V++AC+      +G  I+  VV+ G L +DV V   L+D++ K  G + ++ ++F +
Sbjct: 131 FAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDK 190

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKM-LEEQVPATEVTYSSVLRACASLAALEP 462
            P+RN VTW  MI  + QLG    A+ +F  M L   VP    TYSSVL AC  L  L  
Sbjct: 191 MPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVP-DRFTYSSVLSACTELGLLAL 249

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKC---GSITDARLVFDMMNDWNEVSWNAMISG 519
           G Q+H   ++    +DV V  +L+DMYAKC   GS+ D+R VF+ M + N +SW A+I+ 
Sbjct: 250 GKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITA 309

Query: 520 YSMHG-LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           Y   G    E +++F  M     RPN+ +F  VL AC N      GE  + S     GI 
Sbjct: 310 YVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVY-SYAVKLGIA 368

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
                  S++S+  R+G ++ A K  + I F+ +++ + A++
Sbjct: 369 SVNCVGNSLISMYARSGRMEDARKAFD-ILFEKNLVSYNAIV 409



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 150/297 (50%), Gaps = 8/297 (2%)

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           M Q    P+  T+  +L++C       LG  +H  +++ GL  D  V N L+ +Y+KCG 
Sbjct: 17  MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGD 76

Query: 394 MENSVELF-AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLR 452
            E +  +F     KR+ V+W+ M+  +       +A+  F  MLE      E  +++V+R
Sbjct: 77  TETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIR 136

Query: 453 ACASLAALEPGMQVHCLTVKANY-DMDVVVANALIDMYAK-CGSITDARLVFDMMNDWNE 510
           AC++      G  ++   VK  Y + DV V   LIDM+ K  G +  A  VFD M + N 
Sbjct: 137 ACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNL 196

Query: 511 VSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKS 570
           V+W  MI+ ++  G + + + +F  M+  G+ P+  T+  VLSAC+  GLL  G+    S
Sbjct: 197 VTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQ-LHS 255

Query: 571 MVANYGIEPCIEHYTSMVSLLGRA---GHLDKAAKLIEGIPFQPSVMIWRALLGACI 624
            V   G+   +    S+V +  +    G +D + K+ E +P + +VM W A++ A +
Sbjct: 256 RVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP-EHNVMSWTAIITAYV 311



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 103/203 (50%), Gaps = 3/203 (1%)

Query: 420 VQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDV 479
           + +G +  A      M ++  P    TYS +L++C      + G  VH   +++  ++D 
Sbjct: 2   LDVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDS 61

Query: 480 VVANALIDMYAKCGSITDARLVFD-MMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
           VV N LI +Y+KCG    ARL+F+ M N  + VSW+AM+S ++ + +  + +  F  M +
Sbjct: 62  VVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLE 121

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGR-AGHL 597
            G+ PN   F  V+ ACSN      GE  +  +V    +E  +     ++ +  + +G L
Sbjct: 122 LGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDL 181

Query: 598 DKAAKLIEGIPFQPSVMIWRALL 620
             A K+ + +P + +++ W  ++
Sbjct: 182 GSAYKVFDKMP-ERNLVTWTLMI 203


>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 919

 Score =  534 bits (1375), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 281/806 (34%), Positives = 445/806 (55%), Gaps = 35/806 (4%)

Query: 27  GLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKG 86
           GL  +A    ++   S   P  + +S          L +C + +  Q    IH QV K+G
Sbjct: 122 GLGEEAVRLYREMHRSGVVPTPYVLSSI--------LSACTKTELFQLGRLIHVQVYKQG 173

Query: 87  NCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFS 146
              + F  N L+++Y++      A ++F +M   ++++F T I G+        A+G+F 
Sbjct: 174 FFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFD 233

Query: 147 TLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCG 206
            +   G   +     + L    ++G       + + + K G   +  +  +L+D +   G
Sbjct: 234 EMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSG 293

Query: 207 CVEFARKVFDG-------LFN---------DCFEEALNFFSQMRAVGFKPNNFTFAFVLK 250
            +E A ++FD        L+N         D   ++ + F +M A G +PN FT+  +L+
Sbjct: 294 DIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLR 353

Query: 251 ACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIP 310
            C     I + +  H   +K  ++ D+YV+  L+D+Y+K G +  A+RI + + +KDV+ 
Sbjct: 354 TCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVS 413

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV 370
           W+ MIA Y Q +   +A+E F  M+   + P+     S + ACA ++ +  G+QIH+ V 
Sbjct: 414 WTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVY 473

Query: 371 RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMI 430
             G  +DV + N L+ +YA+CG  + +   F     +  +TWN +I G+ Q G   +A+ 
Sbjct: 474 VSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALK 533

Query: 431 MFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYA 490
           +F KM +        T+ S + A A+LA ++ G Q+H   +K  Y  +  ++NALI +Y 
Sbjct: 534 VFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYG 593

Query: 491 KCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVG 550
           KCGSI DA++ F  M   NEVSWN +I+  S HG   E L +FD M+Q+G +P+++TFVG
Sbjct: 594 KCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVG 653

Query: 551 VLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQ 610
           VL+ACS+ GL+E+G  YFKSM   +GI P  +HY  +V +LGRAG LD+A + +E +P  
Sbjct: 654 VLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIP 713

Query: 611 PSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW------- 663
              M+WR LL AC +H N+EIG  +A+H+L+ EP D A++VLLSN YA+   W       
Sbjct: 714 ADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIR 773

Query: 664 ----EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLS 719
               ++   KEPG SWIE + +VH F  GD  H   + I   L  LN +  K GY  +  
Sbjct: 774 KIMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLADQIYNFLSHLNDRLYKIGYKQENY 833

Query: 720 AVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIV 779
            +  +  ++ K+   +VHSEKLA+AF L  +P   P+R+IKNLR+C DCHT +K  S ++
Sbjct: 834 HLFHEKEKEGKDPTAFVHSEKLAVAFGLMSLPSCMPLRVIKNLRVCNDCHTWMKFTSGVM 893

Query: 780 QREIIIRDVHRFHHFQDGCCSCGDFW 805
            REI++RDV+RFHHF +G CSCGD+W
Sbjct: 894 GREIVLRDVYRFHHFNNGSCSCGDYW 919



 Score =  282 bits (722), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 165/522 (31%), Positives = 268/522 (51%), Gaps = 17/522 (3%)

Query: 95  NVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHE 154
           N+L+++Y K   +  A ++F+E+  R+ +S+V  + GY  +    EAV L+  +HR G  
Sbjct: 81  NLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVV 140

Query: 155 LNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKV 214
             P+  ++ L         +L   +   VYK G  S  FVG ALI  +  C     A +V
Sbjct: 141 PTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRV 200

Query: 215 F-DGLFNDCF---------------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTI 258
           F D L+ D                 + AL  F +M+  G  P++ T A +L AC  +  +
Sbjct: 201 FCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDL 260

Query: 259 RVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARY 318
           R  K  H   LK    +D  +  +LLDLY KSG+I  A +IF+   + +V+ W+ M+  Y
Sbjct: 261 RKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAY 320

Query: 319 AQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDV 378
            Q D    + ++F RM  A V PN+FT+  +L+ C     + LG QIHSL ++ G  SD+
Sbjct: 321 GQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDM 380

Query: 379 FVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE 438
           +VS  L+D+Y+K G ++ +  +     +++ V+W +MI GYVQ     +A+  F +M   
Sbjct: 381 YVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQAC 440

Query: 439 QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDA 498
            +    +  +S + ACA + A+  G Q+H     + Y  DV + N L+ +YA+CG   +A
Sbjct: 441 GIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEA 500

Query: 499 RLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNG 558
              F+ +     ++WN +ISG++  GL  E LKVF  M Q G + N  TFV  +SA +N 
Sbjct: 501 FSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANL 560

Query: 559 GLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKA 600
             ++QG+    + V   G     E   +++SL G+ G ++ A
Sbjct: 561 ADIKQGKQ-IHARVIKTGYTSETEISNALISLYGKCGSIEDA 601



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 145/523 (27%), Positives = 247/523 (47%), Gaps = 23/523 (4%)

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG--WAE 174
           M  R   SF   + G+       + + LF+   R+   L    F   L+     G  W  
Sbjct: 1   MTPRGAASFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRWP- 59

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
           L P + A     G      +G  LID ++  G V  AR+VF+ L                
Sbjct: 60  LVPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYA 119

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            N   EEA+  + +M   G  P  +  + +L AC   +  ++ +  H    K  +  + +
Sbjct: 120 QNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETF 179

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V  AL+ LY +      A R+F +M   D + ++ +I+ +AQ      A+ +F  M+ + 
Sbjct: 180 VGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSG 239

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           ++P+  T  S+L AC+ +  L  G Q+HS +++ G+  D  +  +L+D+Y K G +E ++
Sbjct: 240 LSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEAL 299

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
           ++F    + N V WN M+V Y Q+ ++ K+  +F +ML   V   + TY  +LR C    
Sbjct: 300 QIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTG 359

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
            +  G Q+H LT+K  +  D+ V+  LIDMY+K G +  A+ + DM+ + + VSW +MI+
Sbjct: 360 EIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIA 419

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG-EAYFKSMVANYGI 577
           GY  H    E L+ F  MQ  G  P+N+     +SAC+    + QG + + +  V+ Y  
Sbjct: 420 GYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSA 479

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
           +  I  +  +V L  R G   +A    E I  +  +  W  L+
Sbjct: 480 DVSI--WNGLVYLYARCGISKEAFSSFEAIEHKEGI-TWNGLI 519


>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Glycine max]
          Length = 1047

 Score =  534 bits (1375), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 277/774 (35%), Positives = 447/774 (57%), Gaps = 27/774 (3%)

Query: 59   YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
            +++ L +C + +  +    +H  VLK+G  L+ +  N L+ +Y +L     A ++F+ M 
Sbjct: 274  FSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAML 333

Query: 119  ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
            +R+ +S+ + I G +      +A+ LF  +  +  + +     + L    S+G   +   
Sbjct: 334  QRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQ 393

Query: 179  VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG-------LFN---------DC 222
              +   K G  S+  +  AL+D +  C  ++ A + F         L+N         D 
Sbjct: 394  FHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDN 453

Query: 223  FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
              E+   F+QM+  G +PN FT+  +L+ C  L  + + +  H   LKT ++ ++YV+  
Sbjct: 454  LNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSV 513

Query: 283  LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
            L+D+Y K G++ +A +IF  + +KDV+ W+ MIA YAQ +   +A+ LF  M+   +  +
Sbjct: 514  LIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSD 573

Query: 343  QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
               F S + ACA ++ L+ G QIH+     G   D+ V NAL+ +YA+CG++ ++   F 
Sbjct: 574  NIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFD 633

Query: 403  ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
            +   +++++WN++I G+ Q G   +A+ +FS+M +        T+   + A A++A ++ 
Sbjct: 634  KIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKL 693

Query: 463  GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
            G Q+H + +K  +D +  V+N LI +YAKCG+I DA   F  M + NE+SWNAM++GYS 
Sbjct: 694  GKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQ 753

Query: 523  HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
            HG   + L +F+ M+Q G  PN++TFVGVLSACS+ GL+++G  YF+SM   +G+ P  E
Sbjct: 754  HGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPE 813

Query: 583  HYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDF 642
            HY  +V LLGR+G L +A + +E +P QP  M+ R LL ACI+H N++IG  +A H+L+ 
Sbjct: 814  HYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLEL 873

Query: 643  EPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTS 691
            EP+D AT+VLLSN+YA+   W           ++   KEPG SWIE    VH F AGD  
Sbjct: 874  EPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEPGRSWIEVNNSVHAFFAGDQK 933

Query: 692  HADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMP 751
            H +++ I   L  LN  + + GYIP  +++L D    +K     +HSEKLA+AF L  + 
Sbjct: 934  HPNVDKIYEYLRDLNELAAENGYIPQTNSLLNDAERRQKGPTQIIHSEKLAIAFGLLSLS 993

Query: 752  PSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
             S+PI + KNLR+C DCH  IK +SKI  R I++RD +RFHHF+ G CSC D+W
Sbjct: 994  SSTPIHVFKNLRVCGDCHNWIKYVSKISDRVIVVRDSYRFHHFKGGICSCKDYW 1047



 Score =  289 bits (740), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 179/592 (30%), Positives = 302/592 (51%), Gaps = 33/592 (5%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           NS +Y   L  C+ +        +H ++LK G C ++     L+++Y+    L  A  +F
Sbjct: 67  NSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVF 126

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           DEMP R    +   +  +         +GLF  + +E  ++ P   T +  VL   G  +
Sbjct: 127 DEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQE--KVKPDERT-YAGVLRGCGGGD 183

Query: 175 LCPCVFACVYKL-------GHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF-------- 219
           +    F CV K+       G++++ FV   LID +   G +  A+KVFDGL         
Sbjct: 184 V---PFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWV 240

Query: 220 --------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT 271
                   + C EEA+  F QM   G  P  + F+ VL AC  ++  +V +  HG  LK 
Sbjct: 241 AMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQ 300

Query: 272 CYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELF 331
            + ++ YV  AL+ LY++ G    A ++F  M ++D + ++ +I+  +Q   S  A+ELF
Sbjct: 301 GFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELF 360

Query: 332 CRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC 391
            +M    + P+  T  S+L AC+++  L +G Q HS  ++ G+ SD+ +  AL+D+Y KC
Sbjct: 361 KKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKC 420

Query: 392 GRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVL 451
             ++ + E F  +   N V WN M+V Y  L  + ++  +F++M  E +   + TY S+L
Sbjct: 421 SDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSIL 480

Query: 452 RACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEV 511
           R C+SL A++ G Q+H   +K  +  +V V++ LIDMYAK G +  A  +F  + + + V
Sbjct: 481 RTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVV 540

Query: 512 SWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEA-YFKS 570
           SW AMI+GY+ H   AE L +F  MQ +G   +N+ F   +SAC+    L QG+  + ++
Sbjct: 541 SWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQA 600

Query: 571 MVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
            V+ Y  +  + +  ++VSL  R G +  A    + I F    + W +L+  
Sbjct: 601 CVSGYSDDLSVGN--ALVSLYARCGKVRDAYFAFDKI-FSKDNISWNSLISG 649



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 209/408 (51%), Gaps = 9/408 (2%)

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
            +NF   M   G + N+ T+ ++L  CL           HG  LK  +  ++ +   L+D
Sbjct: 52  GINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMD 111

Query: 286 LYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFT 345
           LY   G++  A  +F+EMP + +  W+ ++ R+    ++   + LF RM Q  V P++ T
Sbjct: 112 LYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERT 171

Query: 346 FVSVLQACATMEGLDLG----NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           +  VL+ C    G D+      +IH+  +  G  + +FV N L+D+Y K G + ++ ++F
Sbjct: 172 YAGVLRGCG---GGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVF 228

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
               KR+ V+W  M+ G  Q G   +A+++F +M    V  T   +SSVL AC  +   +
Sbjct: 229 DGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYK 288

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
            G Q+H L +K  + ++  V NAL+ +Y++ G+   A  VF+ M   +EVS+N++ISG S
Sbjct: 289 VGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLS 348

Query: 522 MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
             G S + L++F  M     +P+ +T   +LSACS+ G L  G+  F S     G+   I
Sbjct: 349 QQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQ-FHSYAIKAGMSSDI 407

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNV 629
               +++ L  +   +  A +       + +V++W  +L A  + +N+
Sbjct: 408 ILEGALLDLYVKCSDIKTAHEFFLSTETE-NVVLWNVMLVAYGLLDNL 454



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 187/408 (45%), Gaps = 19/408 (4%)

Query: 16  THQSKINAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTA 75
           T    +  W   L A   L     S    T +     E N  +Y + L++C     +   
Sbjct: 433 TETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLG 492

Query: 76  MTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVS 135
             IH QVLK G   +++ ++VL+++Y KL +L  A K+F  + E++ +S+   I GY   
Sbjct: 493 EQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQH 552

Query: 136 SQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVG 195
            +F EA+ LF  +  +G   +   F + +     +        + A     G+  +  VG
Sbjct: 553 EKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVG 612

Query: 196 TALIDAFSVCGCVEFARKVFDGLFND-----------------CFEEALNFFSQMRAVGF 238
            AL+  ++ CG V  A   FD +F+                  C EEAL+ FSQM   G 
Sbjct: 613 NALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHC-EEALSLFSQMSKAGQ 671

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
           + N+FTF   + A   +  +++ K  H   +KT ++ +  V+  L+ LY K G I +A R
Sbjct: 672 EINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAER 731

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
            F EMP+K+ I W+ M+  Y+Q      A+ LF  M+Q  V PN  TFV VL AC+ +  
Sbjct: 732 QFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGL 791

Query: 359 LDLGNQIHSLVVRV-GLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           +D G +    +  V GL+        ++D+  + G +  +     E P
Sbjct: 792 VDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMP 839



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 156/340 (45%), Gaps = 34/340 (10%)

Query: 318 YAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD 377
           Y+  +   + +     M +  V  N  T++ +L  C +      G ++H  ++++G  ++
Sbjct: 43  YSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAE 102

Query: 378 VFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
           V +   LMD+Y   G ++ +V +F E P R    WN ++  +V     G+ + +F +ML+
Sbjct: 103 VVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQ 162

Query: 438 EQVPATEVTYSSVLRACASL-AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSIT 496
           E+V   E TY+ VLR C           ++H  T+   Y+  + V N LID+Y K G + 
Sbjct: 163 EKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLN 222

Query: 497 DARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS 556
            A+ VFD +   + VSW AM+SG S  G   E + +F  M   G  P    F  VLSAC+
Sbjct: 223 SAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACT 282

Query: 557 -----------NGGLLEQG---EAYF----------------KSMVANYGIEPCIEHYTS 586
                      +G +L+QG   E Y                    V N  ++     Y S
Sbjct: 283 KVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNS 342

Query: 587 MVSLLGRAGHLDKAAKLIEGI---PFQPSVMIWRALLGAC 623
           ++S L + G+ DKA +L + +     +P  +   +LL AC
Sbjct: 343 LISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSAC 382


>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
          Length = 1005

 Score =  533 bits (1374), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 285/764 (37%), Positives = 433/764 (56%), Gaps = 32/764 (4%)

Query: 71   DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQ 130
            +++   +IH  V ++        +N L+++Y K   +  A ++FD+M +++ +S+ T + 
Sbjct: 245  NIELCRSIHGYVFRRD--FSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMA 302

Query: 131  GYTVSSQFVEAVGLFSTLHREGHELNPF-AFTAFLKVLVSMGWAELCPCVFACVYKLGHD 189
            GY  +  FVE + LF  +      +N   A +AFL    ++   E    +  C  +   D
Sbjct: 303  GYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDL-EKGKEIHGCALQQRID 361

Query: 190  SNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF----------------EEALNFFSQM 233
            S+  V T L+  ++ CG  E A+++F GL                     EEAL+ F +M
Sbjct: 362  SDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEM 421

Query: 234  RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
            +    KPN  T   +L AC  L  +++ KS H   +K   + DL    AL+ +Y K G  
Sbjct: 422  QNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFF 481

Query: 294  SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
            + A   F  M  +D++ W+ +I  YAQ     +A+++F ++R + + P+  T V V+ AC
Sbjct: 482  TAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPAC 541

Query: 354  ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTW 412
            A +  LD G  IH L+V++G  SD  V NAL+D+YAKCG + ++  LF ++   ++ VTW
Sbjct: 542  ALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTW 601

Query: 413  NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
            N +I  Y+Q G   +A+  F +M  E      VT+ SVL A A LAA   GM  H   ++
Sbjct: 602  NVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQ 661

Query: 473  ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
              +  + +V N+LIDMYAKCG +  +  +F+ M+  + VSWNAM+SGY++HG     + +
Sbjct: 662  MGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIAL 721

Query: 533  FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
            F LMQ+   + ++++FV VLSAC + GL+E+G   F SM   Y I+P +EHY  MV LLG
Sbjct: 722  FSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLG 781

Query: 593  RAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVL 652
            RAG  D+    I+ +P +P   +W ALLG+C +H+NV++G ++  H++  EP + A  V+
Sbjct: 782  RAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVV 841

Query: 653  LSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGM 701
            LS+IYA +  W  A             K PG SW+E +  VH FR GD SH  +  +  +
Sbjct: 842  LSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLL 901

Query: 702  LEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKN 761
               L  K  K GY+PD S VL++V E++KE +L+ HSE+LA+ FAL   PP S I+I+KN
Sbjct: 902  WNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKN 961

Query: 762  LRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            LR+C DCHT  K ISKI  R II+RD  RFHHF+DG CSC D+W
Sbjct: 962  LRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005



 Score =  295 bits (756), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 180/593 (30%), Positives = 297/593 (50%), Gaps = 21/593 (3%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E + +++   L++C    +LQ  +  H ++ ++G   D+F    L+++Y K+  L  A +
Sbjct: 126 EPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRARE 185

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +FD+MP+R+ +++   I G + S    EAV  F ++   G E +  +       +  +  
Sbjct: 186 VFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSN 245

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------------- 219
            ELC  +   V++   D ++ V   LID +S CG V+ AR+VFD +              
Sbjct: 246 IELCRSIHGYVFR--RDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAG 303

Query: 220 ---NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
              N CF E L  F +M+    + N  +      A      +   K  HGCAL+   + D
Sbjct: 304 YAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSD 363

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           + VA  L+ +Y K GE   A+++F  +  +D++ WS +IA   QT    +A+ LF  M+ 
Sbjct: 364 ILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQN 423

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             + PN+ T +S+L ACA +  L LG  IH   V+  + SD+    AL+ +YAKCG    
Sbjct: 424 QKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTA 483

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           ++  F     R+ VTWN++I GY Q+G+   A+ MF K+    +     T   V+ ACA 
Sbjct: 484 ALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACAL 543

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN-DWNEVSWNA 515
           L  L+ G  +H L VK  ++ D  V NALIDMYAKCGS+  A  +F+  +   +EV+WN 
Sbjct: 544 LNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNV 603

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           +I+ Y  +G + E +  F  M+   + PN++TFV VL A +      +G A F + +   
Sbjct: 604 IIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMA-FHACIIQM 662

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
           G         S++ +  + G L  + KL   +  + +V  W A+L    +H +
Sbjct: 663 GFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVS-WNAMLSGYAVHGH 714



 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 180/627 (28%), Positives = 300/627 (47%), Gaps = 34/627 (5%)

Query: 45  TPITFSVSEFNSHS---------YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATN 95
           T I    SEF S S         Y   L SC     L   + IH Q++  G       T+
Sbjct: 12  TSIATXASEFPSLSSSTYTNYLHYPRLLSSCKH---LNPLLQIHAQIIVSGFKHHHSITH 68

Query: 96  VLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHEL 155
            L+N+Y   ++   A  +FD  P  + I + + I+ YT S Q+ EA+ ++  +  +G E 
Sbjct: 69  -LINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEP 127

Query: 156 NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF 215
           + + FT  LK        +        + + G + + F+G  L+D +S  G ++ AR+VF
Sbjct: 128 DKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVF 187

Query: 216 DGL-------FNDCFE---------EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIR 259
           D +       +N             EA++FF  M+ VG +P++ +   +      L  I 
Sbjct: 188 DKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIE 247

Query: 260 VAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYA 319
           + +S HG   +   +    V+  L+DLY+K G++  ARR+F++M  +D + W  M+A YA
Sbjct: 248 LCRSIHGYVFRR--DFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYA 305

Query: 320 QTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVF 379
                ++ +ELF +M+   V  N+ + VS   A A    L+ G +IH   ++  + SD+ 
Sbjct: 306 HNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDIL 365

Query: 380 VSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ 439
           V+  LM +YAKCG  E + +LF     R+ V W+ +I   VQ G   +A+ +F +M  ++
Sbjct: 366 VATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQK 425

Query: 440 VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR 499
           +    VT  S+L ACA L+ L+ G  +HC TVKA+ D D+    AL+ MYAKCG  T A 
Sbjct: 426 MKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAAL 485

Query: 500 LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGG 559
             F+ M+  + V+WN++I+GY+  G     + +F  ++     P+  T VGV+ AC+   
Sbjct: 486 TTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLN 545

Query: 560 LLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRAL 619
            L+QG      ++   G E       +++ +  + G L  A  L     F    + W  +
Sbjct: 546 DLDQGTC-IHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVI 604

Query: 620 LGACII--HNNVEIGRLSAQHILDFEP 644
           + A +   H    I       + +F P
Sbjct: 605 IAAYMQNGHAKEAISSFHQMRLENFHP 631



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 13/174 (7%)

Query: 4   LFNYKTFSCKQLTHQSKINAWLRGLSAQAALST---QQCSNSTTTPITFSVSEFNSHSYA 60
           LFN   F+  ++T    I A+++   A+ A+S+    +  N     +TF VS   + +Y 
Sbjct: 588 LFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTF-VSVLPAAAYL 646

Query: 61  TSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPER 120
            + +           M  H  +++ G   +    N L+++Y K  +L  + KLF+EM  +
Sbjct: 647 AAFRE---------GMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHK 697

Query: 121 NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           +T+S+   + GY V      A+ LFS +     +++  +F + L      G  E
Sbjct: 698 DTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVE 751


>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  533 bits (1372), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 280/782 (35%), Positives = 454/782 (58%), Gaps = 34/782 (4%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +Y+  L+SCI+  + Q    +H ++++ G  LD    N L+++Y K      A  +F+ M
Sbjct: 46  TYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGM 105

Query: 118 P-ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
             +R+ +S+   +  +  +S   +A+  F  +   G   N + F A ++   +  +A + 
Sbjct: 106 GNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVG 165

Query: 177 PCVFACVYKLGH-DSNAFVGTALIDAF-SVCGCVEFARKVFDGLFN-------------- 220
             ++  V K G+ +++  VG  LID F    G +  A KVFD +                
Sbjct: 166 EIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFA 225

Query: 221 --DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
              C  +A++ F  M   G+ P+ FT++ VL AC  L  + + K  H   ++    +D+ 
Sbjct: 226 QLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVC 285

Query: 279 VAVALLDLYTK---SGEISNARRIFEEMPKKDVIPWSFMIARYAQT-DLSIDAVELFCRM 334
           V  +L+D+Y K    G + ++R++FE+MP+ +V+ W+ +I  Y Q+ +   +A+ELFC+M
Sbjct: 286 VGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKM 345

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
               + PN F+F SVL+AC  +     G Q++S  V++G+ S   V N+L+ +YA+ GRM
Sbjct: 346 ISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRM 405

Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
           E++ + F    ++N V++N ++ GY +  +  +A ++F+++ +  +  +  T++S+L   
Sbjct: 406 EDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGA 465

Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
           AS+ A+  G Q+H   +K  Y  +  + NALI MY++CG+I  A  VF+ M D N +SW 
Sbjct: 466 ASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWT 525

Query: 515 AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
           +MI+G++ HG +   L++F  M + G +PN +T+V VLSACS+ G++ +G+ +F SM   
Sbjct: 526 SMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKE 585

Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL 634
           +GI P +EHY  MV LLGR+G L +A + I  +P     ++WR LLGAC +H N E+GR 
Sbjct: 586 HGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRH 645

Query: 635 SAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVH 683
           +A+ IL+ EP+D A ++LLSN++A A  W           E+   KE G SWIE +  VH
Sbjct: 646 AAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVH 705

Query: 684 YFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLAL 743
            F  G+TSH     I   L+ L  K ++ GYIPD   VL D+ E++KE++L+ HSEK+A+
Sbjct: 706 RFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAV 765

Query: 744 AFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGD 803
           AF L     S PIRI KNLR+C DCHTAIK IS    REI++RD +RFHH ++G CSC D
Sbjct: 766 AFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCND 825

Query: 804 FW 805
           +W
Sbjct: 826 YW 827



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 133/402 (33%), Positives = 215/402 (53%), Gaps = 14/402 (3%)

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           L+  +Q  A    P+  T++ +LK+C+     ++ K  H   +++  E+D  V   L+ L
Sbjct: 32  LDLMTQQNA---PPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISL 88

Query: 287 YTKSGEISNARRIFEEMP-KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFT 345
           Y+K G+   AR IFE M  K+D++ WS M++ +A   +   A+  F  M +    PN++ 
Sbjct: 89  YSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYC 148

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLL-SDVFVSNALMDVYAK-CGRMENSVELFAE 403
           F +V++AC+      +G  I+  VV+ G L +DV V   L+D++ K  G + ++ ++F +
Sbjct: 149 FAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDK 208

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKM-LEEQVPATEVTYSSVLRACASLAALEP 462
            P+RN VTW  MI  + QLG    A+ +F  M L   VP    TYSSVL AC  L  L  
Sbjct: 209 MPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVP-DRFTYSSVLSACTELGLLAL 267

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKC---GSITDARLVFDMMNDWNEVSWNAMISG 519
           G Q+H   ++    +DV V  +L+DMYAKC   GS+ D+R VF+ M + N +SW A+I+ 
Sbjct: 268 GKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITA 327

Query: 520 YSMHG-LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           Y   G    E +++F  M     RPN+ +F  VL AC N      GE  + S     GI 
Sbjct: 328 YVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVY-SYAVKLGIA 386

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
                  S++S+  R+G ++ A K  + I F+ +++ + A++
Sbjct: 387 SVNCVGNSLISMYARSGRMEDARKAFD-ILFEKNLVSYNAIV 427



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 150/297 (50%), Gaps = 8/297 (2%)

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           M Q    P+  T+  +L++C       LG  +H  +++ GL  D  V N L+ +Y+KCG 
Sbjct: 35  MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGD 94

Query: 394 MENSVELF-AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLR 452
            E +  +F     KR+ V+W+ M+  +       +A+  F  MLE      E  +++V+R
Sbjct: 95  TETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIR 154

Query: 453 ACASLAALEPGMQVHCLTVKANY-DMDVVVANALIDMYAK-CGSITDARLVFDMMNDWNE 510
           AC++      G  ++   VK  Y + DV V   LIDM+ K  G +  A  VFD M + N 
Sbjct: 155 ACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNL 214

Query: 511 VSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKS 570
           V+W  MI+ ++  G + + + +F  M+  G+ P+  T+  VLSAC+  GLL  G+    S
Sbjct: 215 VTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQ-LHS 273

Query: 571 MVANYGIEPCIEHYTSMVSLLGRA---GHLDKAAKLIEGIPFQPSVMIWRALLGACI 624
            V   G+   +    S+V +  +    G +D + K+ E +P + +VM W A++ A +
Sbjct: 274 RVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP-EHNVMSWTAIITAYV 329



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 105/207 (50%), Gaps = 3/207 (1%)

Query: 416 IVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY 475
           ++  + +G +  A      M ++  P    TYS +L++C      + G  VH   +++  
Sbjct: 16  LIRQLDVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGL 75

Query: 476 DMDVVVANALIDMYAKCGSITDARLVFD-MMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
           ++D VV N LI +Y+KCG    ARL+F+ M N  + VSW+AM+S ++ + +  + +  F 
Sbjct: 76  ELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFL 135

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGR- 593
            M + G+ PN   F  V+ ACSN      GE  +  +V    +E  +     ++ +  + 
Sbjct: 136 DMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKG 195

Query: 594 AGHLDKAAKLIEGIPFQPSVMIWRALL 620
           +G L  A K+ + +P + +++ W  ++
Sbjct: 196 SGDLGSAYKVFDKMP-ERNLVTWTLMI 221


>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1005

 Score =  533 bits (1372), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 281/782 (35%), Positives = 435/782 (55%), Gaps = 31/782 (3%)

Query: 53   EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
            E N  +YAT+L++C    DL+    +H + +K G+  DLF  + L+++Y K   +  A +
Sbjct: 226  EANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAER 285

Query: 113  LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELN--PFAFTAFLKVLVSM 170
            +F  MP++N +S+   + G+       + + LF  +   G E+N   F  +  LK   + 
Sbjct: 286  VFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRM--TGSEINFSKFTLSTVLKGCANS 343

Query: 171  GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN---------- 220
            G       V +   ++G + + F+   L+D +S CG    A KVF  + +          
Sbjct: 344  GNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAII 403

Query: 221  DCFE------EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
             C +      EA   F +MR  G  PN FT A ++ A   L  +   +S H C  K  +E
Sbjct: 404  TCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFE 463

Query: 275  MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
             D  V  AL+ +Y K G + +  R+FE    +D+I W+ +++ +   +     + +F +M
Sbjct: 464  YDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQM 523

Query: 335  RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
                  PN +TF+S+L++C+++  +DLG Q+H+ +V+  L  + FV  AL+D+YAK   +
Sbjct: 524  LAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFL 583

Query: 395  ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
            E++  +F    KR+   W  ++ GY Q G+  KA+  F +M  E V   E T +S L  C
Sbjct: 584  EDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGC 643

Query: 455  ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
            + +A L+ G Q+H + +KA    D+ VA+AL+DMYAKCG + DA +VFD +   + VSWN
Sbjct: 644  SRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWN 703

Query: 515  AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
             +I GYS HG   + LK F+ M   G  P+ +TF+GVLSACS+ GL+E+G+ +F S+   
Sbjct: 704  TIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKI 763

Query: 575  YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL 634
            YGI P IEHY  MV +LGRAG   +    IE +    +V+IW  +LGAC +H N+E G  
Sbjct: 764  YGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGER 823

Query: 635  SAQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVH 683
            +A  + + EPE ++ ++LLSN++A    W+           +   KEPG SW+E  G VH
Sbjct: 824  AAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVH 883

Query: 684  YFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLAL 743
             F + D SH  +  I   L+ L+ K    GY P+   VL +V + EK+  L+ HSE+LAL
Sbjct: 884  VFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQELLFYHSERLAL 943

Query: 744  AFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGD 803
            AFAL        IRI KNLRIC DCH  +K IS+I  +E+++RD++ FHHF++G CSC +
Sbjct: 944  AFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEITNQELVVRDINCFHHFKNGSCSCQN 1003

Query: 804  FW 805
            FW
Sbjct: 1004 FW 1005



 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 178/578 (30%), Positives = 286/578 (49%), Gaps = 18/578 (3%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           Y+  L++C    DL     IH QV+K G   D    N L+NVY K      A K+F E+P
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
           ER+ +S+   I G+        AV LF  + REG E N F +   LK        E    
Sbjct: 191 ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQ 250

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF-----------DGLFNDC----- 222
           V A   K+G  S+ FVG+AL+D ++ CG +  A +VF           + L N       
Sbjct: 251 VHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGD 310

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
            E+ LN F +M       + FT + VLK C     +R  +  H  A++   E+D +++  
Sbjct: 311 AEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCC 370

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+D+Y+K G   +A ++F  +   DV+ WS +I    Q   S +A E+F RMR + V PN
Sbjct: 371 LVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPN 430

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           QFT  S++ A   +  L  G  IH+ V + G   D  V NAL+ +Y K G +++   +F 
Sbjct: 431 QFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFE 490

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
            +  R+ ++WN ++ G+         + +F++ML E       T+ S+LR+C+SL+ ++ 
Sbjct: 491 ATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDL 550

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G QVH   VK + D +  V  AL+DMYAK   + DA  +F+ +   +  +W  +++GY+ 
Sbjct: 551 GKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQ 610

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
            G   + +K F  MQ+ G +PN  T    LS CS    L+ G     SM    G    + 
Sbjct: 611 DGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQ-LHSMAIKAGQSGDMF 669

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
             +++V +  + G ++ A  + +G+  + +V  W  ++
Sbjct: 670 VASALVDMYAKCGCVEDAEVVFDGLVSRDTVS-WNTII 706



 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 143/497 (28%), Positives = 247/497 (49%), Gaps = 20/497 (4%)

Query: 47  ITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNR 106
           +T S   F+  + +T L+ C  + +L+    +H   ++ G  LD F +  L+++Y K   
Sbjct: 321 MTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGL 380

Query: 107 LPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV 166
             DA K+F  + + + +S+   I       Q  EA  +F  +   G   N F   + +  
Sbjct: 381 AGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSA 440

Query: 167 LVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------- 219
              +G       + ACV K G + +  V  AL+  +   G V+   +VF+          
Sbjct: 441 ATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISW 500

Query: 220 ---------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALK 270
                    N+  +  L  F+QM A GF PN +TF  +L++C  L  + + K  H   +K
Sbjct: 501 NALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVK 560

Query: 271 TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVEL 330
              + + +V  AL+D+Y K+  + +A  IF  + K+D+  W+ ++A YAQ      AV+ 
Sbjct: 561 NSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKC 620

Query: 331 FCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAK 390
           F +M++  V PN+FT  S L  C+ +  LD G Q+HS+ ++ G   D+FV++AL+D+YAK
Sbjct: 621 FIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAK 680

Query: 391 CGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
           CG +E++  +F     R+ V+WNT+I GY Q G+ GKA+  F  ML+E     EVT+  V
Sbjct: 681 CGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGV 740

Query: 451 LRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDAR-LVFDMMND 507
           L AC+ +  +E G + H  ++   Y +   + +   ++D+  + G   +    + +M   
Sbjct: 741 LSACSHMGLIEEGKK-HFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLT 799

Query: 508 WNEVSWNAMISGYSMHG 524
            N + W  ++    MHG
Sbjct: 800 SNVLIWETVLGACKMHG 816



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 123/384 (32%), Positives = 213/384 (55%), Gaps = 4/384 (1%)

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
           ++ +L+ C     +   K+ HG  +K+    D ++  +L+++Y K G  + A ++F E+P
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
           ++DV+ W+ +I  +        AV LFC MR+  V  N+FT+ + L+AC+    L+ G Q
Sbjct: 191 ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQ 250

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
           +H+  ++VG  SD+FV +AL+D+YAKCG M  +  +F   PK+N V+WN ++ G+ Q+G+
Sbjct: 251 VHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGD 310

Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA 484
             K + +F +M   ++  ++ T S+VL+ CA+   L  G  VH L ++   ++D  ++  
Sbjct: 311 AEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCC 370

Query: 485 LIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPN 544
           L+DMY+KCG   DA  VF  + D + VSW+A+I+     G S E  +VF  M+  G  PN
Sbjct: 371 LVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPN 430

Query: 545 NLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLI 604
             T   ++SA ++ G L  GE+   + V  YG E       ++V++  + G +    ++ 
Sbjct: 431 QFTLASLVSAATDLGDLYYGES-IHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVF 489

Query: 605 EGIPFQPSVMIWRALLGACIIHNN 628
           E       ++ W ALL     H+N
Sbjct: 490 EATT-NRDLISWNALLSG--FHDN 510


>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
          Length = 1097

 Score =  530 bits (1366), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 296/780 (37%), Positives = 415/780 (53%), Gaps = 30/780 (3%)

Query: 55   NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
            NS++Y + L +      L+    +H   +  G  LDL   N L+++Y K   + DA  +F
Sbjct: 319  NSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVF 378

Query: 115  DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV--LVSMGW 172
            D M ER+  S+   I G     +  EA  LF  + R G   N   + + L    + S   
Sbjct: 379  DGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSA 438

Query: 173  AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------------- 219
             E    V     + G  S+  +G ALI  ++ CG ++ AR VFDG+              
Sbjct: 439  LEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGG 498

Query: 220  ---NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
               N C  EA   F QM+  G  P++ T+  +L      D +      H  A++T    D
Sbjct: 499  LAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISD 558

Query: 277  LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
              V  A + +Y + G I +AR +F+++  + V  W+ MI   AQ     +A+ LF +M++
Sbjct: 559  FRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQR 618

Query: 337  AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
                P+  TF+++L A    E L+   ++HS     GL+ D+ V NAL+  Y+KCG ++ 
Sbjct: 619  EGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGLV-DLRVGNALVHTYSKCGNVKY 677

Query: 397  SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
            + ++F +  +RN  TW  MI G  Q G    A   F +ML E +     TY S+L ACAS
Sbjct: 678  AKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACAS 737

Query: 457  LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
              ALE   +VH   V A    D+ V NAL+ MYAKCGSI DAR VFD M + +  SW  M
Sbjct: 738  TGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVM 797

Query: 517  ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
            I G + HG   E L  F  M+  G++PN  ++V VL+ACS+ GL+++G   F SM  +YG
Sbjct: 798  IGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYG 857

Query: 577  IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
            IEP +EHYT MV LLGRAG L++A   I  +P +P    W ALLGAC+ + N+E+   +A
Sbjct: 858  IEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMAEFAA 917

Query: 637  QHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYF 685
            +  L  +P+  +T+VLLSNIYA    WE           K   KEPG SWIE    +H F
Sbjct: 918  KERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVDNRIHSF 977

Query: 686  RAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAF 745
              GDTSH +   I   L  L  + +  GY+PD   VLR+  ++ KE+ L  HSEKLA+ +
Sbjct: 978  VVGDTSHPESKEIYAQLNDLIERLKAKGYVPDTRLVLRNTDQEHKEQALCSHSEKLAIVY 1037

Query: 746  ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
             L       PIR+ KNLR+C DCHTA K ISKI  REI+ RD  RFHHF+DG CSCGD+W
Sbjct: 1038 GLMHTQSKDPIRVYKNLRVCSDCHTATKFISKITGREIVARDAKRFHHFKDGVCSCGDYW 1097



 Score =  272 bits (695), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 163/522 (31%), Positives = 270/522 (51%), Gaps = 24/522 (4%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
            +S SY   LQ C++ +D+  A  +H  ++K G   +L+  N LL VY++  RL  A ++
Sbjct: 116 IDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQV 175

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVL---VSM 170
           FD++ ++N   + T I GY       +A+ ++  + +E  + N   + + LK     V++
Sbjct: 176 FDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNL 235

Query: 171 GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF------- 223
            W +    + A + + G  S+  V TAL++ +  CG +E A+ +FD +            
Sbjct: 236 KWGKK---IHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMI 292

Query: 224 ---------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
                    +EA + F QM+  GF PN++T+  +L A      +   K  H  A+     
Sbjct: 293 GGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLA 352

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
           +DL V  AL+ +Y KSG I +AR +F+ M ++D+  W+ MI   AQ     +A  LF +M
Sbjct: 353 LDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQM 412

Query: 335 RQAFVAPNQFTFVSVLQAC--ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCG 392
           ++    PN  T++S+L A   A+   L+    +H      G +SD+ + NAL+ +YAKCG
Sbjct: 413 QRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCG 472

Query: 393 RMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLR 452
            ++++  +F     R+ ++WN M+ G  Q G   +A  +F +M +E +     TY S+L 
Sbjct: 473 SIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLN 532

Query: 453 ACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS 512
              S  ALE   +VH   V+     D  V +A I MY +CGSI DARL+FD ++  +  +
Sbjct: 533 THGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTT 592

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSA 554
           WNAMI G +      E L +F  MQ+ G+ P+  TF+ +LSA
Sbjct: 593 WNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSA 634



 Score =  258 bits (659), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 175/591 (29%), Positives = 286/591 (48%), Gaps = 21/591 (3%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +Y + L++C    +L+    IH  +++ G   D+     L+N+YVK   + DA  +F
Sbjct: 218 NEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIF 277

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D+M ERN IS+   I G     +  EA  LF  + REG   N + + + L    S G  E
Sbjct: 278 DKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALE 337

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN-DCF---------- 223
               V +     G   +  VG AL+  ++  G ++ AR VFDG+   D F          
Sbjct: 338 WVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLA 397

Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDT--IRVAKSAHGCALKTCYEMD 276
                +EA + F QM+  G  PN  T+  +L A     T  +   K  H  A +  +  D
Sbjct: 398 QHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISD 457

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           L +  AL+ +Y K G I +AR +F+ M  +DVI W+ M+   AQ     +A  +F +M+Q
Sbjct: 458 LRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQ 517

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             + P+  T++S+L    + + L+  N++H   V  GL+SD  V +A + +Y +CG +++
Sbjct: 518 EGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDD 577

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           +  LF +   R+  TWN MI G  Q     +A+ +F +M  E       T+ ++L A   
Sbjct: 578 ARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVD 637

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
             ALE   +VH     A   +D+ V NAL+  Y+KCG++  A+ VFD M + N  +W  M
Sbjct: 638 EEALEWVKEVHSHATDAGL-VDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMM 696

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           I G + HG   +    F  M + G  P+  T+V +LSAC++ G LE  +      V+  G
Sbjct: 697 IGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSA-G 755

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
           +   +    ++V +  + G +D A  + + +  +  V  W  ++G    H 
Sbjct: 756 LVSDLRVGNALVHMYAKCGSIDDARSVFDDM-VERDVFSWTVMIGGLAQHG 805



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 178/601 (29%), Positives = 292/601 (48%), Gaps = 38/601 (6%)

Query: 140 EAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALI 199
           +AV +     ++G  ++ F++   L+  +      L   V  C+ K G + N +V   L+
Sbjct: 101 DAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLL 160

Query: 200 DAFSVCGCVEFARKVFDGLFNDCF----------------EEALNFFSQMRAVGFKPNNF 243
             +  CG ++ AR+VFD L                     E+A+  + +MR    +PN  
Sbjct: 161 RVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEI 220

Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
           T+  +LKAC     ++  K  H   +++ ++ D+ V  AL+++Y K G I +A+ IF++M
Sbjct: 221 TYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKM 280

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
            +++VI W+ MI   A      +A  LF +M++    PN +T+VS+L A A+   L+   
Sbjct: 281 VERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVK 340

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
           ++HS  V  GL  D+ V NAL+ +YAK G ++++  +F    +R+  +W  MI G  Q G
Sbjct: 341 EVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHG 400

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRAC--ASLAALEPGMQVHCLTVKANYDMDVVV 481
              +A  +F +M          TY S+L A   AS +ALE    VH    +A +  D+ +
Sbjct: 401 RGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRI 460

Query: 482 ANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW 541
            NALI MYAKCGSI DARLVFD M D + +SWNAM+ G + +G   E   VF  MQQ G 
Sbjct: 461 GNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGL 520

Query: 542 RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAA 601
            P++ T++ +L+   +   LE      K  V   G+       ++ + +  R G +D A 
Sbjct: 521 VPDSTTYLSLLNTHGSTDALEWVNEVHKHAVET-GLISDFRVGSAFIHMYIRCGSIDDAR 579

Query: 602 KLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPE----DEAT--HVLLSN 655
            L + +  +  V  W A++G          GR +    L  + E    D  T  ++L +N
Sbjct: 580 LLFDKLSVR-HVTTWNAMIGGAA---QQRCGREALSLFLQMQREGFIPDATTFINILSAN 635

Query: 656 IYAMARSWEK---AASKEPGLSWIE-NQGMVH-YFRAGDTSHA----DMNIIRGMLEWLN 706
           +   A  W K   + + + GL  +     +VH Y + G+  +A    D  + R +  W  
Sbjct: 636 VDEEALEWVKEVHSHATDAGLVDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTM 695

Query: 707 M 707
           M
Sbjct: 696 M 696


>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Brachypodium distachyon]
          Length = 874

 Score =  530 bits (1364), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 299/773 (38%), Positives = 431/773 (55%), Gaps = 34/773 (4%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKG-NCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERN 121
           L+ C    D  +   +HC  +K G +  ++     L+++Y+K   + D   +F+ MP+RN
Sbjct: 106 LKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRN 165

Query: 122 TISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFA 181
            +++ + + GY       + + LF  +  EG   NPF FT+ L  + S G  +L   V A
Sbjct: 166 VVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHA 225

Query: 182 CVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG----------------LFNDCFEE 225
              K G  S  FV  +LI+ +S CG VE A+ VF                  L N+   E
Sbjct: 226 QSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLE 285

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           AL  F   RA   K +  T++ V+K C  L  + +A+  H C LK  +  D  V  A++D
Sbjct: 286 ALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMD 345

Query: 286 LYTKSGEISNARRIFEEMP-KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
            Y+K GE+ +A  IF  MP  ++V+ W+ MI    Q      A  LF RMR+  V PN+F
Sbjct: 346 AYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEF 405

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           T+ +VL A   +    L  QIH+ +++        V  AL+  Y+K G  E ++ +F   
Sbjct: 406 TYSTVLTASIPI----LLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMI 461

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS-LAALEPG 463
             ++ V W+ M+  Y Q G+   A  +F KM  + +   E T SS + ACAS  A ++ G
Sbjct: 462 DHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQG 521

Query: 464 MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMH 523
            Q H +++K  Y   + V +AL+ MYA+ GSI  AR+VF+   D + VSWN+MISGY+ H
Sbjct: 522 RQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQH 581

Query: 524 GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEH 583
           G S E L  F  M+  G   +  TF+ V+  C++ GL+++G+ YF SMV ++ I P +EH
Sbjct: 582 GYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEH 641

Query: 584 YTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFE 643
           Y+ MV L  RAG LD+   LIEG+PF    M+WR LLGAC +H NVE+G+L+AQ +L  E
Sbjct: 642 YSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVHKNVELGKLAAQKLLLLE 701

Query: 644 PEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSH 692
           P+D AT+VLLSNIYA A  W+           K   KE G SWI+ +  VH F A D SH
Sbjct: 702 PDDSATYVLLSNIYAAAGRWKERDEVRKLMDSKKVKKEAGCSWIQIKNKVHSFIACDKSH 761

Query: 693 ADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPP 752
                I   L+ +  + ++ GY P+ S VL D+ E++KE  L +HSE+LALAF L   PP
Sbjct: 762 PLSEQIYAKLKAMTTRLKQEGYCPNTSVVLHDIAEEQKETMLVMHSERLALAFGLIATPP 821

Query: 753 SSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            +P++I+KNLR+C DCH  +K++S I  REII+RD  RFHHF  G CSCGDFW
Sbjct: 822 RTPLQIVKNLRVCGDCHMVMKMVSLIEDREIIMRDCSRFHHFNAGACSCGDFW 874



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 126/489 (25%), Positives = 231/489 (47%), Gaps = 24/489 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  ++ + L +      +     +H Q +K G    +F  N L+N+Y K   + +A  +F
Sbjct: 200 NPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVF 259

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
            +M  R+ +S+ T + G  ++   +EA+ LF        +L+   ++  +K+  ++    
Sbjct: 260 RQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLA 319

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF------------DGLFNDC 222
           L   + +CV K G  S+  V TA++DA+S CG ++ A  +F              +   C
Sbjct: 320 LARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGC 379

Query: 223 FEE-----ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
            +      A   FS+MR    KPN FT++ VL A + +    +    H   +KT Y+   
Sbjct: 380 IQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPI----LLPQIHAQIIKTNYQHAP 435

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
            V  ALL  Y+K G    A  IF+ +  KDV+ WS M++ Y+Q      A  +F +M   
Sbjct: 436 SVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQ 495

Query: 338 FVAPNQFTFVSVLQACAT-MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
            + PN+FT  S + ACA+   G+D G Q H++ ++      + V +AL+ +YA+ G +++
Sbjct: 496 GMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDS 555

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           +  +F     R+ V+WN+MI GY Q G   +A+  F +M    +     T+ +V+  C  
Sbjct: 556 ARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTH 615

Query: 457 LAALEPGMQ-VHCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWN 514
              ++ G Q    + +  N    +   + ++D+Y++ G + +   L+  M      + W 
Sbjct: 616 AGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWR 675

Query: 515 AMISGYSMH 523
            ++    +H
Sbjct: 676 TLLGACRVH 684



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 148/284 (52%), Gaps = 2/284 (0%)

Query: 349 VLQACATMEGLDLGNQIHSLVVRVGL-LSDVFVSNALMDVYAKCGRMENSVELFAESPKR 407
           VL+ C  +     G Q+H L V+ G   ++V V  AL+D+Y KCG +E+   +F   PKR
Sbjct: 105 VLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKR 164

Query: 408 NHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVH 467
           N VTW +++ GYVQ       M +F +M  E V     T++SVL A AS  A++ G +VH
Sbjct: 165 NVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVH 224

Query: 468 CLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSA 527
             +VK      V V N+LI+MY+KCG + +A+ VF  M   + VSWN +++G  ++    
Sbjct: 225 AQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQL 284

Query: 528 EVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSM 587
           E L++F   +    + +  T+  V+  C+N   L        S V  +G        T++
Sbjct: 285 EALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALAR-QLHSCVLKHGFHSDGNVMTAI 343

Query: 588 VSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEI 631
           +    + G LD A  +   +P   +V+ W A++G CI + ++ +
Sbjct: 344 MDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPL 387



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 181/391 (46%), Gaps = 32/391 (8%)

Query: 50  SVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD 109
           S+++ +  +Y+T ++ C     L  A  +H  VLK G   D      +++ Y K   L D
Sbjct: 296 SMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDD 355

Query: 110 ATKLFDEMP-ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLV 168
           A  +F  MP  +N +S+   I G   ++    A  LFS +  +  + N F ++  L   +
Sbjct: 356 AFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASI 415

Query: 169 SMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------- 218
            +    L P + A + K  +     VGTAL+ ++S  G  E A  +F  +          
Sbjct: 416 PI----LLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSA 471

Query: 219 -------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKAC----LGLDTIRVAKSAHGC 267
                    DC + A N F +M   G KPN FT +  + AC     G+D     +  H  
Sbjct: 472 MLSCYSQAGDC-DGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQ---GRQFHAI 527

Query: 268 ALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDA 327
           ++K  Y+  + V  AL+ +Y + G I +AR +FE    +D++ W+ MI+ YAQ   S +A
Sbjct: 528 SIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEA 587

Query: 328 VELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ-IHSLVVRVGLLSDVFVSNALMD 386
           ++ F +M    +  +  TF++V+  C     +  G Q   S+V+   +   +   + ++D
Sbjct: 588 LDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVD 647

Query: 387 VYAKCGRMENSVELFAESP-KRNHVTWNTMI 416
           +Y++ G+++ ++ L    P     + W T++
Sbjct: 648 LYSRAGKLDETMNLIEGMPFPAGAMVWRTLL 678



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 95/182 (52%), Gaps = 3/182 (1%)

Query: 448 SSVLRACASLAALEPGMQVHCLTVKANYD-MDVVVANALIDMYAKCGSITDARLVFDMMN 506
           S VL+ C  +     G Q+HCL VK  +D  +V V  AL+DMY KCG + D R+VF+ M 
Sbjct: 103 SRVLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMP 162

Query: 507 DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEA 566
             N V+W ++++GY      ++V+ +F  M+  G  PN  TF  VLSA ++ G ++ G  
Sbjct: 163 KRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRR 222

Query: 567 YFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH 626
                V  +G    +    S++++  + G +++A  +   +  +  V  W  L+   +++
Sbjct: 223 VHAQSV-KFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVS-WNTLMAGLLLN 280

Query: 627 NN 628
            +
Sbjct: 281 EH 282


>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like, partial [Vitis vinifera]
          Length = 825

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 291/767 (37%), Positives = 431/767 (56%), Gaps = 32/767 (4%)

Query: 67  IQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFV 126
           ++N +L  A     Q+ +K    +  +TN++++ YVK   L +A KLFD M ER  +++ 
Sbjct: 63  LKNGELSQAR----QLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWT 118

Query: 127 TTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKL 186
             I GY+  +QF EA  LF  + R G E +   F   L              V   + KL
Sbjct: 119 ILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKL 178

Query: 187 GHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GLFNDCFEE-ALNFF 230
           G+DS   VG  L+D++     ++ A ++F                G   D  +E A+N F
Sbjct: 179 GYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLF 238

Query: 231 SQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKS 290
            +M+  G KP  FTFA VL A +GLD I + +  H   +KT +  +++V+ ALLD Y+K 
Sbjct: 239 VEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKH 298

Query: 291 GEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVL 350
             + +AR++F+EMP++D + ++ +I+ YA       A +LF  ++       QF F ++L
Sbjct: 299 DSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATML 358

Query: 351 QACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHV 410
              +     ++G QIH+  +     S++ V N+L+D+YAKCG+ E +  +F     R+ V
Sbjct: 359 SIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAV 418

Query: 411 TWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLT 470
            W  MI  YVQ G   + + +F+KM +  V A + T++S+LRA AS+A+L  G Q+H   
Sbjct: 419 PWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFI 478

Query: 471 VKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVL 530
           +K+ +  +V   +AL+D+YAKCGSI DA   F  M D N VSWNAMIS Y+ +G +   L
Sbjct: 479 IKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATL 538

Query: 531 KVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSL 590
           K F  M   G +P++++F+GVLSACS+ GL+E+G  +F SM   Y ++P  EHY S+V +
Sbjct: 539 KSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDM 598

Query: 591 LGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEP-EDEAT 649
           L R+G  ++A KL+  +P  P  ++W ++L AC IH N E+ R +A  + + E   D A 
Sbjct: 599 LCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAP 658

Query: 650 HVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNII 698
           +V +SNIYA A  WE           +   K P  SW+E +   H F A D  H  +  I
Sbjct: 659 YVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEI 718

Query: 699 RGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRI 758
           R  ++ L     + GY PD S  L +  E  K   L  HSE+LA+AFAL   P  SPI +
Sbjct: 719 RKKIDMLTKTMEELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILV 778

Query: 759 IKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +KNLR C+DCH AIK+ISKIV REI +RD  RFHHF+DG CSCGDFW
Sbjct: 779 MKNLRACIDCHAAIKVISKIVGREITVRDSTRFHHFRDGFCSCGDFW 825



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 168/612 (27%), Positives = 292/612 (47%), Gaps = 54/612 (8%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           ++ T L  C  ++       +  Q++K G    L   N L++ Y K NRL  A +LF EM
Sbjct: 151 TFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEM 210

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
           PE +++S+   I GY+      +AV LF  +   G +   F F A L   + +    L  
Sbjct: 211 PEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQ 270

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FND 221
            + + V K     N FV  AL+D +S    V  ARK+FD +                ++ 
Sbjct: 271 QIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDG 330

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
             + A + F +++   F    F FA +L          + +  H   + T  + ++ V  
Sbjct: 331 KHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGN 390

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           +L+D+Y K G+   A  IF  +  +  +PW+ MI+ Y Q     + ++LF +MRQA V  
Sbjct: 391 SLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIA 450

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           +Q TF S+L+A A++  L LG Q+HS +++ G +S+VF  +AL+DVYAKCG ++++V+ F
Sbjct: 451 DQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTF 510

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
            E P RN V+WN MI  Y Q GE    +  F +M+   +    V++  VL AC+    +E
Sbjct: 511 QEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVE 570

Query: 462 PGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMIS 518
            G+  H  ++   Y +D    +  +++DM  + G   +A +L+ +M  D +E+ W+++++
Sbjct: 571 EGLW-HFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLN 629

Query: 519 GYSMHGLSAEVLK-----VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA 573
              +H  + E+ +     +F++ + R   P    +V + +  +  G  E      K+M  
Sbjct: 630 ACRIHK-NQELARRAADQLFNMEELRDAAP----YVNMSNIYAAAGQWENVSKVHKAM-R 683

Query: 574 NYGIEPC-------IEHYTSMVSLLGR--------AGHLDKAAKLIEGIPFQPSVMIWRA 618
           + G++         I+H T M S   R           +D   K +E + ++P       
Sbjct: 684 DRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDT----- 738

Query: 619 LLGACIIHNNVE 630
              +C +HN  E
Sbjct: 739 ---SCALHNEDE 747



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 201/399 (50%), Gaps = 41/399 (10%)

Query: 269 LKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIP------------------ 310
           +KT ++ D   +   +  + K+GE+S AR++FE+MP K+ +                   
Sbjct: 44  VKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEAR 103

Query: 311 -------------WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATME 357
                        W+ +I  Y+Q +   +A ELF +M++    P+  TFV++L  C    
Sbjct: 104 KLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGC---N 160

Query: 358 GLDLGNQI---HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
           G ++GNQI    + ++++G  S + V N L+D Y K  R++ + +LF E P+ + V++N 
Sbjct: 161 GHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNA 220

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
           MI GY + G   KA+ +F +M    +  TE T+++VL A   L  +  G Q+H   +K N
Sbjct: 221 MITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTN 280

Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
           +  +V V+NAL+D Y+K  S+ DAR +FD M + + VS+N +ISGY+  G       +F 
Sbjct: 281 FVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFR 340

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQG-EAYFKSMVANYGIEPCIEHYTSMVSLLGR 593
            +Q   +      F  +LS  SN    E G + + +++V     E  + +  S+V +  +
Sbjct: 341 ELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGN--SLVDMYAK 398

Query: 594 AGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIG 632
            G  ++A  +   +  + +V  W A++ A +     E G
Sbjct: 399 CGKFEEAEMIFTNLTHRSAV-PWTAMISAYVQKGFYEEG 436



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 108/233 (46%), Gaps = 33/233 (14%)

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           L++ N I + +V+ G   D   SN  +  + K G +  + +LF + P +N V+ N MI G
Sbjct: 33  LNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISG 92

Query: 419 YVQLGEVGKAMIMFSKMLEE----------------------------QVPATE---VTY 447
           YV+ G +G+A  +F  M+E                             Q   TE   VT+
Sbjct: 93  YVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTF 152

Query: 448 SSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND 507
            ++L  C          QV    +K  YD  ++V N L+D Y K   +  A  +F  M +
Sbjct: 153 VTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPE 212

Query: 508 WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGL 560
            + VS+NAMI+GYS  GL  + + +F  MQ  G +P   TF  VL  C+N GL
Sbjct: 213 IDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVL--CANIGL 263



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 73/368 (19%), Positives = 142/368 (38%), Gaps = 53/368 (14%)

Query: 47  ITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNR 106
           + F+  +     +AT L       D +    IH Q +      ++   N L+++Y K  +
Sbjct: 342 LQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGK 401

Query: 107 LPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV 166
             +A  +F  +  R+ + +   I  Y     + E + LF+ + +     +   F + L+ 
Sbjct: 402 FEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRA 461

Query: 167 LVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------- 218
             S+    L   + + + K G  SN F G+AL+D ++ CG ++ A + F  +        
Sbjct: 462 SASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSW 521

Query: 219 --------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALK 270
                    N   E  L  F +M   G +P++ +F  VL AC     +      H  ++ 
Sbjct: 522 NAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGL-WHFNSMT 580

Query: 271 TCYEMDLYVA--VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAV 328
             Y++D       +++D+  +SG  + A ++  EMP                        
Sbjct: 581 QIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMP------------------------ 616

Query: 329 ELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVY 388
                     + P++  + SVL AC   +  +L  +    +  +  L D      + ++Y
Sbjct: 617 ----------IDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIY 666

Query: 389 AKCGRMEN 396
           A  G+ EN
Sbjct: 667 AAAGQWEN 674


>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 999

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 265/755 (35%), Positives = 430/755 (56%), Gaps = 25/755 (3%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L +C + +  +    +H  VLK+G   + +  N L+ +Y +   L  A ++F  M +R+ 
Sbjct: 258 LSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDR 317

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +S+ + I G         A+ LF  ++ +  + +     + L    S+G         + 
Sbjct: 318 VSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSY 377

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN-DCFEEALNFFSQMRAVGFKPN 241
             K G  S+  V  +L+D +  C  ++ A + F      D   ++   F+QM+  G  PN
Sbjct: 378 AIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPN 437

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
            FT+  +LK C  L    + +  H   LKT ++ ++YV+  L+D+Y K G++ +A +IF 
Sbjct: 438 QFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFR 497

Query: 302 EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL 361
            + + DV+ W+ MIA Y Q D   +A+ LF  M+   +  +   F S + ACA ++ LD 
Sbjct: 498 RLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQ 557

Query: 362 GNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQ 421
           G QIH+     G   D+ + NAL+ +YA+CG++  +   F +   +++V+WN+++ G+ Q
Sbjct: 558 GRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQ 617

Query: 422 LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVV 481
            G   +A+ +F++M +  +     T+ S + A A++A +  G Q+H +  K  YD +  V
Sbjct: 618 SGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEV 677

Query: 482 ANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW 541
           +NALI +YAKCG+I D             +SWN+MI+GYS HG   E LK+F+ M+Q   
Sbjct: 678 SNALITLYAKCGTIDD-------------ISWNSMITGYSQHGCGFEALKLFEDMKQLDV 724

Query: 542 RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAA 601
            PN++TFVGVLSACS+ GL+++G +YF+SM   + + P  EHY  +V LLGR+G L +A 
Sbjct: 725 LPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAK 784

Query: 602 KLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMAR 661
           + +E +P QP  M+WR LL AC +H N++IG  +A H+L+ EP+D AT+VL+SN+YA++ 
Sbjct: 785 RFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSG 844

Query: 662 SW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSR 710
            W           ++   KEPG SW+E    VH F AGD +H   ++I   L  L+ ++ 
Sbjct: 845 KWDCRDRTRQMMKDRGVKKEPGRSWVEVDNSVHAFFAGDQNHPRADMIYEYLRGLDFRAA 904

Query: 711 KAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHT 770
           + GY+P  +++L D    +K+    +HSE+LA+AF L  +  S+P+ + KNLR+C DCH 
Sbjct: 905 ENGYVPRCNSLLSDAEIRQKDPTEIIHSERLAIAFGLLSLTSSTPLYVFKNLRVCEDCHN 964

Query: 771 AIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            IK +SKI  R II+RD +RFHHF+ G CSC D+W
Sbjct: 965 WIKHVSKITDRVIIVRDSYRFHHFKVGSCSCKDYW 999



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 156/563 (27%), Positives = 271/563 (48%), Gaps = 47/563 (8%)

Query: 53  EFNSHSYATSLQSCIQND-DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           EF+   +A  L+ C  N    +    IH + +  G     F  N L+++Y K   L  A 
Sbjct: 160 EFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAK 219

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
           K+F+ +  R+++S+V  I G + +    EA+ LF  +               L     + 
Sbjct: 220 KVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTKVE 265

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF---------------D 216
           + E    +   V K G  S  +V  AL+  +S  G +  A ++F                
Sbjct: 266 FFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLIS 325

Query: 217 GLFNDCF-EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
           GL    +   AL  F +M     KP+  T A +L AC  +  +   K  H  A+K     
Sbjct: 326 GLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTS 385

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
           D+ V  +LLDLY K  +I  A   F                 Y Q D    + ++F +M+
Sbjct: 386 DIVVEGSLLDLYVKCSDIKTAHEFF---------------LCYGQLDNLNKSFQIFTQMQ 430

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
              + PNQFT+ S+L+ C T+   DLG QIH+ V++ G   +V+VS+ L+D+YAK G+++
Sbjct: 431 IEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLD 490

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
           +++++F    + + V+W  MI GY Q  +  +A+ +F +M ++ + +  + ++S + ACA
Sbjct: 491 HALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACA 550

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
            + AL+ G Q+H  +  + Y  D+ + NAL+ +YA+CG + +A   FD +   + VSWN+
Sbjct: 551 GIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNS 610

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           ++SG++  G   E L +F  M + G   N+ TF   +SA +N   +  G+     M+   
Sbjct: 611 LVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQ-IHGMIRKT 669

Query: 576 GIEPCIEHYTSMVSLLGRAGHLD 598
           G +   E   ++++L  + G +D
Sbjct: 670 GYDSETEVSNALITLYAKCGTID 692



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 153/533 (28%), Positives = 259/533 (48%), Gaps = 28/533 (5%)

Query: 97  LLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELN 156
           L++ Y+    L  A  +FDEMP R+   +      +          GLF  +  +  E +
Sbjct: 103 LIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFD 162

Query: 157 PFAFTAFLKV----LVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFAR 212
              F   L+      VS  + E    + A     G +S+ F+   LID +   G +  A+
Sbjct: 163 ERIFAVVLRGCSGNAVSFRFVEQ---IHAKTITSGFESSTFICNPLIDLYFKNGFLSSAK 219

Query: 213 KVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTF--AFVLKACLGLDTIRVAKSAHGCALK 270
           KVF+ L        +   S +   G++          VL AC  ++     K  HG  LK
Sbjct: 220 KVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQIVLSACTKVEFFEFGKQLHGLVLK 279

Query: 271 TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVEL 330
             +  + YV  AL+ LY++SG +S+A +IF  M ++D + ++ +I+  AQ      A+ L
Sbjct: 280 QGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALAL 339

Query: 331 FCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAK 390
           F +M      P+  T  S+L ACA++  L  G Q HS  ++ G+ SD+ V  +L+D+Y K
Sbjct: 340 FKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVK 399

Query: 391 CGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
           C  ++ + E F               + Y QL  + K+  +F++M  E +   + TY S+
Sbjct: 400 CSDIKTAHEFF---------------LCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSI 444

Query: 451 LRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE 510
           L+ C +L A + G Q+H   +K  +  +V V++ LIDMYAK G +  A  +F  + + + 
Sbjct: 445 LKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDV 504

Query: 511 VSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG-EAYFK 569
           VSW AMI+GY+ H    E L +F  MQ +G + +N+ F   +SAC+    L+QG + + +
Sbjct: 505 VSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQ 564

Query: 570 SMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           S ++ Y  +  I +  ++VSL  R G + +A    + I  + +V  W +L+  
Sbjct: 565 SCLSGYSDDLSIGN--ALVSLYARCGKVREAYAAFDQIYAKDNVS-WNSLVSG 614



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 114/425 (26%), Positives = 196/425 (46%), Gaps = 51/425 (12%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +Y + L++C           IH QVLK G   +++ ++VL+++Y K  +L  A K+F
Sbjct: 437 NQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIF 496

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             + E + +S+   I GYT   +F EA+ LF  +  +G + +   F + +     +   +
Sbjct: 497 RRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALD 556

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
               + A     G+  +  +G AL+  ++ CG V  A   FD ++               
Sbjct: 557 QGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFA 616

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            +  FEEALN F+QM   G + N+FTF   + A   +  +R+ K  HG   KT Y+ +  
Sbjct: 617 QSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETE 676

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V+ AL+ LY K G I             D I W+ MI  Y+Q     +A++LF  M+Q  
Sbjct: 677 VSNALITLYAKCGTI-------------DDISWNSMITGYSQHGCGFEALKLFEDMKQLD 723

Query: 339 VAPNQFTFVSVLQACATMEGLDLG-------NQIHSLVVRVGLLSDVFVSNALMDVYAKC 391
           V PN  TFV VL AC+ +  +D G       ++ H+LV +    +       ++D+  + 
Sbjct: 724 VLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYA------CVVDLLGRS 777

Query: 392 GRMENSVELFAESP-KRNHVTWNTMIVG-----YVQLGEVGKAMIMFSKMLEEQVPATEV 445
           G +  +     E P + + + W T++        + +GE   + ++    LE +  AT V
Sbjct: 778 GLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLL---ELEPKDSATYV 834

Query: 446 TYSSV 450
             S++
Sbjct: 835 LVSNM 839



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 135/560 (24%), Positives = 241/560 (43%), Gaps = 76/560 (13%)

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
            + +   M   G + N+ TF ++L+ CL                        Y  + L+D
Sbjct: 65  GIGYLHLMEQHGVRANSQTFLWLLEGCLN-------------------SRSFYDGLKLID 105

Query: 286 LYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFT 345
            Y   G+++ A  +F+EMP + +  W+ +   +    L      LF RM    V  ++  
Sbjct: 106 FYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERI 165

Query: 346 FVSVLQACA-TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           F  VL+ C+          QIH+  +  G  S  F+ N L+D+Y K G + ++ ++F   
Sbjct: 166 FAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENL 225

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
             R+ V+W  MI G  Q G   +AM++F ++              VL AC  +   E G 
Sbjct: 226 KARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTKVEFFEFGK 271

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
           Q+H L +K  +  +  V NAL+ +Y++ G+++ A  +F  M+  + VS+N++ISG +  G
Sbjct: 272 QLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQG 331

Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY 584
                L +F  M     +P+ +T   +LSAC++ G L  G+  F S     G+   I   
Sbjct: 332 YINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQ-FHSYAIKAGMTSDIVVE 390

Query: 585 TSMVSL----------------LGRAGHLDKAAKL-----IEGIPFQPSVMIWRALLGAC 623
            S++ L                 G+  +L+K+ ++     IEGI   P+   + ++L  C
Sbjct: 391 GSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIV--PNQFTYPSILKTC 448

Query: 624 IIHNNVEIGRLSAQHILD--FEPEDEATHVLLSNIYAMARSWEKAAS-----KEPG-LSW 675
                 ++G      +L   F+     + VL+ ++YA     + A       KE   +SW
Sbjct: 449 TTLGATDLGEQIHTQVLKTGFQFNVYVSSVLI-DMYAKHGKLDHALKIFRRLKENDVVSW 507

Query: 676 IENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSA-----VLRDVREDEK 730
                M+  +   D     +N+ + M +   +KS   G+   +SA      L   R+   
Sbjct: 508 T---AMIAGYTQHDKFTEALNLFKEMQDQ-GIKSDNIGFASAISACAGIQALDQGRQIHA 563

Query: 731 ERYLWVHSEKLALAFALFKM 750
           +  L  +S+ L++  AL  +
Sbjct: 564 QSCLSGYSDDLSIGNALVSL 583


>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 879

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 291/765 (38%), Positives = 420/765 (54%), Gaps = 30/765 (3%)

Query: 71  DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP-ERNTISFVTTI 129
           D    + +H   +  G   D+F  N L+ +Y     + +A ++FDE   +RN +S+   +
Sbjct: 115 DAGLGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMM 174

Query: 130 QGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHD 189
             +  + +  +AV LF  +   G   N F F+  +         E    V A V + G+D
Sbjct: 175 SAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYD 234

Query: 190 SNAFVGTALIDAFSVCGCVEFARKVF-----------DGLFNDCF-----EEALNFFSQM 233
            + F   AL+D +S  G +  A  VF           +   + C      + AL    QM
Sbjct: 235 KDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQM 294

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVA--KSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
           ++ G  PN FT + +LKAC G      A  +  HG  +K C + D Y+ VAL+D+Y K G
Sbjct: 295 KSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYG 354

Query: 292 EISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQ 351
            + +AR++FE +P+KD++ W+ +I+  +      +++ LFCRMR+     N+ T  +VL+
Sbjct: 355 LLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLK 414

Query: 352 ACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
           + A++E +    Q+H+L  ++G LSD  V N L+D Y KC  +  + ++F E    N + 
Sbjct: 415 STASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIA 474

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
           + +MI    Q      A+ +F +ML + +       SS+L ACASL+A E G QVH   +
Sbjct: 475 FTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLI 534

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
           K  +  DV   NAL+  YAKCGSI DA L F  + D   VSW+AMI G + HG     L 
Sbjct: 535 KRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALD 594

Query: 532 VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLL 591
           VF  M      PN++T   VL AC++ GL+++ + YF SM   +GI+   EHY+ M+ LL
Sbjct: 595 VFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLL 654

Query: 592 GRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHV 651
           GRAG LD A +L+  +PF+ +  +W ALL A  +H + E+G+L+A+ +   EPE   THV
Sbjct: 655 GRAGKLDDAMELVNSMPFEANAAVWGALLAASRVHRDPELGKLAAEKLFVLEPEKSGTHV 714

Query: 652 LLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRG 700
           LL+N YA A  W++ A            KEP +SW+E +  VH F  GD SH     I  
Sbjct: 715 LLANTYASAGMWDEVAKVRKLMKDSKVKKEPAMSWVELKDRVHTFIVGDKSHPRARDIYA 774

Query: 701 MLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIK 760
            LE L     KAGY+P+L   L DV + EKE  L  HSE+LA+AFAL   P  +PIR+ K
Sbjct: 775 KLEELGDLMSKAGYVPNLEVDLHDVDKSEKELLLSHHSERLAVAFALISTPAGAPIRVKK 834

Query: 761 NLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           NLRIC DCH A K ISKIV REIIIRD++RFHHF DG CSCGD+W
Sbjct: 835 NLRICRDCHVAFKFISKIVSREIIIRDINRFHHFSDGACSCGDYW 879



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 168/571 (29%), Positives = 280/571 (49%), Gaps = 28/571 (4%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLP-DATKLFDEMPERNTISFVTTIQGYTVSS 136
           IH  +LK G  L  F  N LL+ Y K  RLP  A ++FDE P+   +S+ + +  Y+ ++
Sbjct: 26  IHAHLLKSG-LLHAF-RNHLLSFYSKC-RLPGSARRVFDETPDPCHVSWSSLVTAYSNNA 82

Query: 137 QFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGT 196
              EA+  F  +   G   N FA    LK     G   L   V A     G   + FV  
Sbjct: 83  LPREALAAFRAMRARGVRCNEFALPIVLKCAPDAG---LGVQVHAVAVSTGLSGDIFVAN 139

Query: 197 ALIDAFSVCGCVEFARKVFD------------GLF-----NDCFEEALNFFSQMRAVGFK 239
           AL+  +   G V+ AR+VFD            G+      ND   +A+  F +M   G +
Sbjct: 140 ALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVR 199

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           PN F F+ V+ AC G   +   +  H   ++T Y+ D++ A AL+D+Y+K G+I  A  +
Sbjct: 200 PNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALV 259

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQ--ACATME 357
           F ++PK DV+ W+  I+          A+EL  +M+ + + PN FT  S+L+  A A   
Sbjct: 260 FGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAG 319

Query: 358 GLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIV 417
              LG QIH  +++    SD ++  AL+D+YAK G ++++ ++F   P+++ + WN +I 
Sbjct: 320 AFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALIS 379

Query: 418 GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM 477
           G    G  G+++ +F +M +E       T ++VL++ ASL A+    QVH L  K  +  
Sbjct: 380 GCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLS 439

Query: 478 DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQ 537
           D  V N LID Y KC  +  A  VF+  +  N +++ +MI+  S      + +K+F  M 
Sbjct: 440 DSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEML 499

Query: 538 QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHL 597
           ++G  P+      +L+AC++    EQG+     ++    +        ++V    + G +
Sbjct: 500 RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAG-NALVYTYAKCGSI 558

Query: 598 DKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
           + A     G+P    V+ W A++G    H +
Sbjct: 559 EDADLAFSGLP-DKGVVSWSAMIGGLAQHGH 588



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 140/516 (27%), Positives = 251/516 (48%), Gaps = 24/516 (4%)

Query: 31  QAALSTQQCSNSTT--TPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNC 88
            A +   +CS++      + +S    N   ++  + +C  + DL+    +H  V++ G  
Sbjct: 175 SAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYD 234

Query: 89  LDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTL 148
            D+F  N L+++Y KL  +  A  +F ++P+ + +S+   I G  +      A+ L   +
Sbjct: 235 KDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQM 294

Query: 149 HREGHELNPFAFTAFLKVLVSMGWAELCPC--VFACVYKLGHDSNAFVGTALIDAFSVCG 206
              G   N F  ++ LK     G         +   + K   DS+ ++G AL+D ++  G
Sbjct: 295 KSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYG 354

Query: 207 CVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLK 250
            ++ ARKVF+ +                   C  E+L+ F +MR  G   N  T A VLK
Sbjct: 355 LLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLK 414

Query: 251 ACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIP 310
           +   L+ I      H  A K  +  D +V   L+D Y K   +  A ++FEE    ++I 
Sbjct: 415 STASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIA 474

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV 370
           ++ MI   +Q D   DA++LF  M +  + P+ F   S+L ACA++   + G Q+H+ ++
Sbjct: 475 FTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLI 534

Query: 371 RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMI 430
           +   ++DVF  NAL+  YAKCG +E++   F+  P +  V+W+ MI G  Q G   +A+ 
Sbjct: 535 KRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALD 594

Query: 431 MFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDM 488
           +F +M++E++    +T +SVL AC + A L    + +  ++K  + +D    +   +ID+
Sbjct: 595 VFRRMVDERIAPNHITLTSVLCAC-NHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDL 653

Query: 489 YAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
             + G + DA  LV  M  + N   W A+++   +H
Sbjct: 654 LGRAGKLDDAMELVNSMPFEANAAVWGALLAASRVH 689



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 86/281 (30%), Positives = 139/281 (49%), Gaps = 8/281 (2%)

Query: 349 VLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRN 408
           +L   A  + L LG  IH+ +++ GLL      N L+  Y+KC    ++  +F E+P   
Sbjct: 10  LLTRYAATQSLFLGAHIHAHLLKSGLLH--AFRNHLLSFYSKCRLPGSARRVFDETPDPC 67

Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHC 468
           HV+W++++  Y       +A+  F  M    V   E     VL+ CA  A L  G+QVH 
Sbjct: 68  HVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLK-CAPDAGL--GVQVHA 124

Query: 469 LTVKANYDMDVVVANALIDMYAKCGSITDARLVFD-MMNDWNEVSWNAMISGYSMHGLSA 527
           + V      D+ VANAL+ MY   G + +AR VFD    D N VSWN M+S +  +   +
Sbjct: 125 VAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCS 184

Query: 528 EVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSM 587
           + +++F  M   G RPN   F  V++AC+    LE G     +MV   G +  +    ++
Sbjct: 185 DAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRK-VHAMVVRTGYDKDVFTANAL 243

Query: 588 VSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
           V +  + G +  AA +   +P +  V+ W A +  C++H +
Sbjct: 244 VDMYSKLGDIHMAALVFGKVP-KTDVVSWNAFISGCVLHGH 283



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 6/179 (3%)

Query: 446 TYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMM 505
           + S +L   A+  +L  G  +H   +K+   +     N L+  Y+KC     AR VFD  
Sbjct: 6   SISPLLTRYAATQSLFLGAHIHAHLLKSG--LLHAFRNHLLSFYSKCRLPGSARRVFDET 63

Query: 506 NDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE 565
            D   VSW+++++ YS + L  E L  F  M+ RG R N      VL    + GL  Q  
Sbjct: 64  PDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAGLGVQVH 123

Query: 566 AYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACI 624
           A    +  + G+   I    ++V++ G  G +D+A ++ +      + + W  ++ A +
Sbjct: 124 A----VAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFV 178


>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
 gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 868

 Score =  527 bits (1358), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 290/758 (38%), Positives = 424/758 (55%), Gaps = 34/758 (4%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           +HCQ +K G   D+     L++ Y+K +   D  K+FDEM ERN +++ T I GY  +S 
Sbjct: 115 LHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSM 174

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
             E + LF  +  EG + N F F A L VL   G       V   V K G D    V  +
Sbjct: 175 NDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNS 234

Query: 198 LIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPN 241
           LI+ +  CG V  AR +FD                   N    EAL  F  MR    + +
Sbjct: 235 LINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLS 294

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
             +FA V+K C  L  +R  +  H   +K  +  D  +  AL+  Y+K   + +A R+F+
Sbjct: 295 ESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFK 354

Query: 302 EMP-KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLD 360
           E+    +V+ W+ MI+ + Q D   +AV+LF  M++  V PN+FT+  +L A   +    
Sbjct: 355 EIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP-- 412

Query: 361 LGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYV 420
             +++H+ VV+        V  AL+D Y K G++E + ++F+    ++ V W+ M+ GY 
Sbjct: 413 --SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYA 470

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL-AALEPGMQVHCLTVKANYDMDV 479
           Q GE   A+ MF ++ +  +   E T+SS+L  CA+  A++  G Q H   +K+  D  +
Sbjct: 471 QTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSL 530

Query: 480 VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
            V++AL+ MYAK G+I  A  VF    + + VSWN+MISGY+ HG + + L VF  M++R
Sbjct: 531 CVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKR 590

Query: 540 GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDK 599
             + + +TF+GV +AC++ GL+E+GE YF  MV +  I P  EH + MV L  RAG L+K
Sbjct: 591 KVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEK 650

Query: 600 AAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAM 659
           A K+IE +P      IWR +L AC +H   E+GRL+A+ I+  +PED A +VLLSN+YA 
Sbjct: 651 AMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAE 710

Query: 660 ARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMK 708
           +  W           E+   KEPG SWIE +   + F AGD SH   + I   LE L+ +
Sbjct: 711 SGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTR 770

Query: 709 SRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDC 768
            +  GY PD S VL+D+ ++ KE  L  HSE+LA+AF L   P  SP+ IIKNLR+C DC
Sbjct: 771 LKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDC 830

Query: 769 HTAIKIISKIVQREIIIRDVHRFHHF-QDGCCSCGDFW 805
           H  IK+I+KI +REI++RD +RFHHF  DG CSCGDFW
Sbjct: 831 HLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 158/548 (28%), Positives = 277/548 (50%), Gaps = 34/548 (6%)

Query: 102 VKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFT 161
           V  +RL +A  LFD+ P R+  S+++ + G++   +  EA  LF  +HR G E++   F+
Sbjct: 38  VSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFS 97

Query: 162 AFLKVLVSM-----GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD 216
           + LKV  ++     G    C C+     K G   +  VGT+L+D +      +  RKVFD
Sbjct: 98  SVLKVSATLCDELFGRQLHCQCI-----KFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFD 152

Query: 217 GL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRV 260
            +                 N   +E L  F +M+  G +PN+FTFA  L           
Sbjct: 153 EMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGR 212

Query: 261 AKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQ 320
               H   +K   +  + V+ +L++LY K G +  AR +F++   K V+ W+ MI+ YA 
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA 272

Query: 321 TDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFV 380
             L ++A+ +F  MR  +V  ++ +F SV++ CA ++ L    Q+H  VV+ G L D  +
Sbjct: 273 NGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332

Query: 381 SNALMDVYAKCGRMENSVELFAE-SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ 439
             ALM  Y+KC  M +++ LF E     N V+W  MI G++Q     +A+ +FS+M  + 
Sbjct: 333 RTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG 392

Query: 440 VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR 499
           V   E TYS +L A   L  + P  +VH   VK NY+    V  AL+D Y K G + +A 
Sbjct: 393 VRPNEFTYSVILTA---LPVISPS-EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAA 448

Query: 500 LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSAC-SNG 558
            VF  ++D + V+W+AM++GY+  G +   +K+F  + + G +PN  TF  +L+ C +  
Sbjct: 449 KVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATN 508

Query: 559 GLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRA 618
             + QG+  F        ++  +   ++++++  + G+++ A ++ +    +  ++ W +
Sbjct: 509 ASMGQGKQ-FHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKR-QREKDLVSWNS 566

Query: 619 LLGACIIH 626
           ++     H
Sbjct: 567 MISGYAQH 574



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 141/494 (28%), Positives = 251/494 (50%), Gaps = 34/494 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           NS ++A +L    +       + +H  V+K G    +  +N L+N+Y+K   +  A  LF
Sbjct: 193 NSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILF 252

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D+   ++ +++ + I GY  +   +EA+G+F ++      L+  +F + +K+  ++    
Sbjct: 253 DKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELR 312

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVC-------------GC----VEFARKVFDG 217
               +   V K G   +  + TAL+ A+S C             GC    V +   +   
Sbjct: 313 FTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGF 372

Query: 218 LFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
           L ND  EEA++ FS+M+  G +PN FT++ +L A   +    V    H   +KT YE   
Sbjct: 373 LQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEV----HAQVVKTNYERSS 428

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
            V  ALLD Y K G++  A ++F  +  KD++ WS M+A YAQT  +  A+++F  + + 
Sbjct: 429 TVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKG 488

Query: 338 FVAPNQFTFVSVLQAC-ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
            + PN+FTF S+L  C AT   +  G Q H   ++  L S + VS+AL+ +YAK G +E+
Sbjct: 489 GIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIES 548

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           + E+F    +++ V+WN+MI GY Q G+  KA+ +F +M + +V    VT+  V  AC  
Sbjct: 549 AEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTH 608

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVA------NALIDMYAKCGSITDA-RLVFDMMNDWN 509
              +E G +   + V+     D  +A      + ++D+Y++ G +  A +++ +M N   
Sbjct: 609 AGLVEEGEKYFDIMVR-----DCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAG 663

Query: 510 EVSWNAMISGYSMH 523
              W  +++   +H
Sbjct: 664 STIWRTILAACRVH 677



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 171/341 (50%), Gaps = 1/341 (0%)

Query: 290 SGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSV 349
           S  + NA  +F++ P +D   +  ++  +++   + +A  LF  + +  +  +   F SV
Sbjct: 40  SSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSV 99

Query: 350 LQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNH 409
           L+  AT+     G Q+H   ++ G L DV V  +L+D Y K    ++  ++F E  +RN 
Sbjct: 100 LKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNV 159

Query: 410 VTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCL 469
           VTW T+I GY +     + + +F +M  E       T+++ L   A       G+QVH +
Sbjct: 160 VTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTV 219

Query: 470 TVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEV 529
            VK   D  + V+N+LI++Y KCG++  AR++FD     + V+WN+MISGY+ +GL  E 
Sbjct: 220 VVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEA 279

Query: 530 LKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVS 589
           L +F  M+    R +  +F  V+  C+N   L   E    S+V  YG        T+++ 
Sbjct: 280 LGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVV-KYGFLFDQNIRTALMV 338

Query: 590 LLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
              +   +  A +L + I    +V+ W A++   + ++  E
Sbjct: 339 AYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKE 379


>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score =  526 bits (1354), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 288/792 (36%), Positives = 443/792 (55%), Gaps = 31/792 (3%)

Query: 41  NSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNV 100
           + T +  T+  S    H  A  L+ C    +L   + +   ++K G   +      L+++
Sbjct: 62  HRTPSSRTYIPSHVYKHPSAILLELCTSMKELHQFIPL---IIKNGLYSEHLFQTKLVSL 118

Query: 101 YVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAF 160
           + K   L +A ++F  + ++    + T ++GY  +S   +AV  F  +  +G     + F
Sbjct: 119 FCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNF 178

Query: 161 TAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---- 216
           T  LKV            +   +   G  SN F  T +++ ++ C  VE A K+FD    
Sbjct: 179 TYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPE 238

Query: 217 -----------GLFNDCF-EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSA 264
                      G   + F + AL    +M+  G +P++ T   +L A   + ++R+ +S 
Sbjct: 239 RDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSI 298

Query: 265 HGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLS 324
           HG +++  +E  + V+ AL+D+Y+K G +  AR IF+ M  K V+ W+ MI  Y Q    
Sbjct: 299 HGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDP 358

Query: 325 IDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNAL 384
             A+E+F +M    V     T +  L ACA +  ++ G  +H L+ ++ L SDV V N+L
Sbjct: 359 GAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSL 418

Query: 385 MDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATE 444
           + +Y+KC R++ + E+F     +  V+WN MI+GY Q G + +A+  F KM  + +    
Sbjct: 419 ISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDS 478

Query: 445 VTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDM 504
            T  SV+ A A L+ L     +H L ++   D +V VA AL+DMYAKCG++  AR +FDM
Sbjct: 479 FTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDM 538

Query: 505 MNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG 564
           M++ +  +WNAMI GY  HGL    L++F+ M++   +PN +TF+ VLSACS+ GL+E+G
Sbjct: 539 MDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEG 598

Query: 565 EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACI 624
             YF SM  +YG+EP ++HY +MV LLGRA  L++A   I+ +P +P++ ++ A+LGAC 
Sbjct: 599 FQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACR 658

Query: 625 IHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGL 673
           IH NVE+G  +A  I D +P+D   HVLL+NIYA A  W+K A            K PG 
Sbjct: 659 IHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGW 718

Query: 674 SWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERY 733
           S +E Q  VH F +G TSH     I   LE L  + + AGY+PD ++V  DV +  KE+ 
Sbjct: 719 SVVELQNEVHTFYSGTTSHPQAKKIYAFLETLGNRIKAAGYMPDTNSV-HDVEDVVKEQL 777

Query: 734 LWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHH 793
           L  HSEKLA+AF+L    P + I + KNLR+C DCH A K IS + +REII+RD+ RFHH
Sbjct: 778 LNSHSEKLAIAFSLLNTSPGTTIHLRKNLRVCGDCHNATKYISLVTKREIIVRDMRRFHH 837

Query: 794 FQDGCCSCGDFW 805
           F+DG CSCGD+W
Sbjct: 838 FKDGTCSCGDYW 849


>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
 gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
          Length = 874

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 288/781 (36%), Positives = 443/781 (56%), Gaps = 34/781 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCL-DLFATNVLLNVYVKLNRLPDATKL 113
           +S + +  L++C    D      +HC  +K G+   ++ A   L+++Y+K   + +  ++
Sbjct: 98  DSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEV 157

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           F+ MP++N +++ + + G   +    E + LF  +  EG   NPF F + L  + S G  
Sbjct: 158 FEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGAL 217

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GL 218
           +L   V A   K G  S+ FV  +L++ ++ CG VE A+ VF+               GL
Sbjct: 218 DLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGL 277

Query: 219 -FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
             N+C  EAL  F + RA   K    T+A V+K C  L  + +A+  H C LK  + +  
Sbjct: 278 QLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTG 337

Query: 278 YVAVALLDLYTKSGEISNARRIFE-EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
            V  AL D Y+K GE+++A  IF      ++V+ W+ +I+   Q      AV LF RMR+
Sbjct: 338 NVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMRE 397

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             V PN+FT+ ++L+A  ++    L  QIH+ V++       FV  AL+  Y+K G  E+
Sbjct: 398 DRVMPNEFTYSAMLKASLSI----LPPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTED 453

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA- 455
           ++ +F    +++ V W+ M+  + Q G+   A  +F+KM  + +   E T SSV+ ACA 
Sbjct: 454 ALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACAC 513

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
             A ++ G Q H +++K  Y   + V++AL+ MY++ G+I  A++VF+   D + VSWN+
Sbjct: 514 PSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNS 573

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           MISGY+ HG S + ++ F  M+  G + + +TF+ V+  C++ GL+ +G+ YF SMV ++
Sbjct: 574 MISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDH 633

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS 635
            I P +EHY  MV L  RAG LD+   LI  +PF    M+WR LLGAC +H NVE+G+ S
Sbjct: 634 KINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFS 693

Query: 636 AQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHY 684
           A  +L  EP D +T+VLLSNIYA A  W+           +   KE G SWI+ +  VH 
Sbjct: 694 ADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHS 753

Query: 685 FRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALA 744
           F A D SH   + I   L+ +  + ++ GY P+ S VL D+ ED+KE  L  HSE+LALA
Sbjct: 754 FIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALA 813

Query: 745 FALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
           F L   PP +P++I+KNLR+C DCH  +K++S I  REII+RD  RFHHF  G CSCGDF
Sbjct: 814 FGLIATPPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHHFNGGACSCGDF 873

Query: 805 W 805
           W
Sbjct: 874 W 874



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 129/412 (31%), Positives = 215/412 (52%), Gaps = 10/412 (2%)

Query: 212 RKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT 271
           R +FD        E L+ FS  R  G   ++ T + VLKAC  +    + +  H   +K 
Sbjct: 69  RVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKC 128

Query: 272 CYEM-DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVEL 330
            ++  ++    +L+D+Y K G +     +FE MPKK+V+ W+ ++   A   +  + + L
Sbjct: 129 GHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMAL 188

Query: 331 FCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAK 390
           F RMR   + PN FTF SVL A A+   LDLG ++H+  V+ G  S VFV N+LM++YAK
Sbjct: 189 FFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAK 248

Query: 391 CGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVG-KAMIMFSKMLEEQVPATEVTYSS 449
           CG +E++  +F     R+ V+WNT++ G +QL E   +A+ +F +        T+ TY++
Sbjct: 249 CGLVEDAKSVFNWMETRDMVSWNTLMAG-LQLNECELEALQLFHESRATMGKMTQSTYAT 307

Query: 450 VLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDM-MNDW 508
           V++ CA+L  L    Q+H   +K  + +   V  AL D Y+KCG + DA  +F M     
Sbjct: 308 VIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSR 367

Query: 509 NEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYF 568
           N VSW A+ISG   +G     + +F  M++    PN  T+  +L A  +   +   + + 
Sbjct: 368 NVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLS---ILPPQIHA 424

Query: 569 KSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
           + +  NY   P +   T++++   + G  + A  + + I  Q  V+ W A+L
Sbjct: 425 QVIKTNYQHIPFVG--TALLASYSKFGSTEDALSIFKMIE-QKDVVAWSAML 473



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 169/340 (49%), Gaps = 3/340 (0%)

Query: 295 NARRIFEEMPKKDV-IPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
            AR   +E+P++D  +  + ++  YA+  + ++ ++ F   R+  V  +  T   VL+AC
Sbjct: 50  GARYPLDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKAC 109

Query: 354 ATMEGLDLGNQIHSLVVRVGL-LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTW 412
            ++    LG Q+H L V+ G    +V    +L+D+Y KCG +   +E+F   PK+N VTW
Sbjct: 110 RSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTW 169

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
            +++ G        + M +F +M  E +     T++SVL A AS  AL+ G +VH  +VK
Sbjct: 170 TSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVK 229

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
                 V V N+L++MYAKCG + DA+ VF+ M   + VSWN +++G  ++    E L++
Sbjct: 230 FGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQL 289

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
           F   +    +    T+  V+  C+N   L        S V  +G        T++     
Sbjct: 290 FHESRATMGKMTQSTYATVIKLCANLKQLALARQ-LHSCVLKHGFHLTGNVMTALADAYS 348

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIG 632
           + G L  A  +        +V+ W A++  CI + ++ + 
Sbjct: 349 KCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLA 388



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 184/392 (46%), Gaps = 34/392 (8%)

Query: 50  SVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD 109
           ++ +    +YAT ++ C     L  A  +H  VLK G  L       L + Y K   L D
Sbjct: 296 TMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELAD 355

Query: 110 ATKLFD-EMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLV 168
           A  +F      RN +S+   I G   +     AV LFS +  +    N F ++A LK  +
Sbjct: 356 ALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASL 415

Query: 169 SMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------- 218
           S+    L P + A V K  +    FVGTAL+ ++S  G  E A  +F  +          
Sbjct: 416 SI----LPPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSA 471

Query: 219 -------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKAC----LGLDTIRVAKSAHGC 267
                    DC E A   F++M   G KPN FT + V+ AC     G+D     +  H  
Sbjct: 472 MLSCHAQAGDC-EGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQ---GRQFHAI 527

Query: 268 ALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDA 327
           ++K  Y   + V+ AL+ +Y++ G I +A+ +FE    +D++ W+ MI+ YAQ   S+ A
Sbjct: 528 SIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKA 587

Query: 328 VELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL-GNQIHSLVVRVGLLSDVFVSNALM- 385
           +E F +M  + +  +  TF++V+  C T  GL + G Q    +VR   ++      A M 
Sbjct: 588 IETFRQMEASGIQMDGVTFLAVIMGC-THNGLVVEGQQYFDSMVRDHKINPTMEHYACMV 646

Query: 386 DVYAKCGRMENSVELFAESP-KRNHVTWNTMI 416
           D+Y++ G+++ ++ L  + P     + W T++
Sbjct: 647 DLYSRAGKLDETMSLIRDMPFPAGAMVWRTLL 678


>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 867

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 282/769 (36%), Positives = 435/769 (56%), Gaps = 33/769 (4%)

Query: 66  CIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISF 125
           C  + D +    +HCQ +K G    +     L+++Y+K   + D  ++FDEM ERN +S+
Sbjct: 103 CAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSW 162

Query: 126 VTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYK 185
            + + GY+ +  +     LF  +  EG   N +  +  +  LV+ G   +   V A V K
Sbjct: 163 TSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVK 222

Query: 186 LGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNF 229
            G +    V  +LI  +S  G +  AR VFD +                 N    E    
Sbjct: 223 HGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEI 282

Query: 230 FSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK 289
           F++M+  G KP + TFA V+K+C  L  + + K     ALK+ +  D  V  AL+   +K
Sbjct: 283 FNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSK 342

Query: 290 SGEISNARRIFEEMPK-KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVS 348
             E+ +A  +F  M + K+V+ W+ MI+   Q   +  AV LF +MR+  V PN FT+ +
Sbjct: 343 CKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSA 402

Query: 349 VLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRN 408
           +L    T+      +++H+ V++        V  AL+D Y K G   ++V++F     ++
Sbjct: 403 IL----TVHYPVFVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKD 458

Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS-LAALEPGMQVH 467
            + W+ M+ GY Q GE  +A  +F ++++E +   E T+SSV+ ACAS  AA E G Q H
Sbjct: 459 LMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFH 518

Query: 468 CLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSA 527
              +K   +  + V++AL+ MYAK G+I  A  VF    + + VSWN+MISGYS HG + 
Sbjct: 519 AYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAK 578

Query: 528 EVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSM 587
           + L+VFD MQ+R    + +TF+GV++AC++ GL+E+G+ YF SM+ ++ I P ++HY+ M
Sbjct: 579 KALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCM 638

Query: 588 VSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDE 647
           + L  RAG L+KA  +I  +PF P   +WR LLGA  +H NVE+G L+A+ ++  +PED 
Sbjct: 639 IDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDS 698

Query: 648 ATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMN 696
           A +VLLSN+YA A +W+           +   KEPG SWIE +   + F AGD +H   N
Sbjct: 699 AAYVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSN 758

Query: 697 IIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPI 756
            I   L  L+++ + AGY PD   V  D+ +++KE  L  HSE+LA+AF L   PP  PI
Sbjct: 759 QIYSKLSELSIRLKDAGYQPDTKNVFHDIEDEQKETILSHHSERLAIAFGLIATPPEIPI 818

Query: 757 RIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +I+KNLR+C DCH   K++S + QR I++RD +RFHHF+DG CSCGD+W
Sbjct: 819 QIVKNLRVCGDCHNFTKLVSLVEQRYIVVRDSNRFHHFKDGLCSCGDYW 867



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 117/400 (29%), Positives = 216/400 (54%), Gaps = 7/400 (1%)

Query: 224 EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
           +EALN F  +     +P+  T + V   C G    ++ +  H   +K      + V  +L
Sbjct: 75  KEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSL 134

Query: 284 LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
           +D+Y K+  +++ RR+F+EM +++V+ W+ ++A Y+   L     ELFC+M+   V PN+
Sbjct: 135 VDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNR 194

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
           +T  +V+ A      + +G Q+H++VV+ G    + V N+L+ +Y++ G + ++ ++F +
Sbjct: 195 YTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDK 254

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
              R+ VTWN+MI GYV+ G+  +   +F+KM    V  T +T++SV+++CASL  L   
Sbjct: 255 MEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALV 314

Query: 464 MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDW-NEVSWNAMISGYSM 522
             + C  +K+ +  D +V  AL+   +KC  + DA  +F +M +  N VSW AMISG   
Sbjct: 315 KLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQ 374

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
           +G + + + +F  M++ G +PN+ T+  +L+      + E      K+   NY     + 
Sbjct: 375 NGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFVSEMHAEVIKT---NYERSSSVG 431

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
             T+++    + G+   A K+ E I  +  +M W A+L  
Sbjct: 432 --TALLDAYVKLGNTIDAVKVFEIIEAK-DLMAWSAMLAG 468



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 173/334 (51%), Gaps = 9/334 (2%)

Query: 296 ARRIFEEMPKKDVI--PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
           A  +F+++P +       + ++  Y++   + +A+ LF  +  + + P++ T   V   C
Sbjct: 44  AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
           A      LG Q+H   V+ GL+  V V  +L+D+Y K   + +   +F E  +RN V+W 
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWT 163

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
           +++ GY   G  G    +F +M  E V     T S+V+ A  +   +  G+QVH + VK 
Sbjct: 164 SLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKH 223

Query: 474 NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVF 533
            ++  + V N+LI +Y++ G + DAR VFD M   + V+WN+MI+GY  +G   EV ++F
Sbjct: 224 GFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIF 283

Query: 534 DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYF---KSMVANYGIEPCIEHYTSMVSL 590
           + MQ  G +P ++TF  V+ +C++  L E         K++ + +  +  +   T+++  
Sbjct: 284 NKMQLAGVKPTHMTFASVIKSCAS--LRELALVKLMQCKALKSGFTTDQIV--ITALMVA 339

Query: 591 LGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACI 624
           L +   +D A  L   +    +V+ W A++  C+
Sbjct: 340 LSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCL 373



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 187/394 (47%), Gaps = 29/394 (7%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           ++A+ ++SC    +L     + C+ LK G   D      L+    K   + DA  LF  M
Sbjct: 297 TFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLM 356

Query: 118 PE-RNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
            E +N +S+   I G   +    +AV LFS + REG + N F ++A L V   +  +E+ 
Sbjct: 357 EEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFVSEM- 415

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF------------- 223
               A V K  ++ ++ VGTAL+DA+   G    A KVF+ +                  
Sbjct: 416 ---HAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQT 472

Query: 224 ---EEALNFFSQMRAVGFKPNNFTFAFVLKACLG-LDTIRVAKSAHGCALKTCYEMDLYV 279
              EEA   F Q+   G KPN FTF+ V+ AC          K  H  A+K      L V
Sbjct: 473 GETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCV 532

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
           + AL+ +Y K G I +A  +F+   ++D++ W+ MI+ Y+Q   +  A+E+F  M++  +
Sbjct: 533 SSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNM 592

Query: 340 APNQFTFVSVLQACATMEGLDLGNQ-IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
             +  TF+ V+ AC     ++ G +  +S++    +   +   + ++D+Y++ G +E ++
Sbjct: 593 DVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAM 652

Query: 399 ELFAESPKRNHVT-WNTMIVGY-----VQLGEVG 426
            +  E P     T W T++        V+LGE+ 
Sbjct: 653 GIINEMPFPPGATVWRTLLGAARVHRNVELGELA 686


>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score =  523 bits (1347), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 277/752 (36%), Positives = 422/752 (56%), Gaps = 36/752 (4%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEM----PERNTISFVTTIQGYTVSSQF-----VE 140
           DL + + L++ YV+  R  +A   + EM     + N  +F + ++G +++        + 
Sbjct: 112 DLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQIH 171

Query: 141 AVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALID 200
            V L + +   G   N F+ +  L     +        V   + KLG+DS+ F   AL+D
Sbjct: 172 RVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLD 231

Query: 201 AFSVCGCVEFARKVF-----------DGLFNDCF-----EEALNFFSQMRAVGFKPNNFT 244
            ++  GC E A  VF           + +   C      + AL    +M +    P+ FT
Sbjct: 232 MYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFT 291

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
            +  LKAC  +  +++ +  H   +K   E D +V V L+D+Y+K G + +AR +F+ MP
Sbjct: 292 LSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMP 351

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
            KDVI W+ +I+ Y+     I+A+ LF  M +  +  NQ T  ++L++ A  +      Q
Sbjct: 352 XKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQ 411

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
           +H++ ++ G   D +V+N+L+D Y KC  +E++ ++F   P  + V + +MI  Y Q G 
Sbjct: 412 VHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGL 471

Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA 484
             +A+ M+ +M +  +      +SS+  ACA+L+A E G Q+H   +K     DV   N+
Sbjct: 472 GEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNS 531

Query: 485 LIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPN 544
           L++MYAKCGSI DA  +F+ ++    VSW+AMI G + HG   + L++F  M + G  PN
Sbjct: 532 LVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPN 591

Query: 545 NLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLI 604
           ++T V VLSAC++ GL+ +   +F  M   +GI P  EHY  MV +LGR G LD+A  L+
Sbjct: 592 HITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLV 651

Query: 605 EGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE 664
           + +PFQ S  +W ALLGA  IH N+E+GR +A+ +L  EPE   TH+LL+NIYA    W+
Sbjct: 652 KEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYASTGMWD 711

Query: 665 KAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAG 713
             A            KEPG+SWIE +  V+ F  GD SH     I   L+ L  +   AG
Sbjct: 712 NVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRSKEIYVKLDDLRERLTSAG 771

Query: 714 YIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIK 773
           Y+P +   L DV + EKE+ LW HSEKLA+AF L   PP +PIR+ KNLR+C+DCHTA K
Sbjct: 772 YVPMIETDLHDVEQIEKEQLLWHHSEKLAVAFGLIATPPGAPIRVKKNLRVCIDCHTAFK 831

Query: 774 IISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            ISK+  REII+RD++RFHHF+DG CSCGD+W
Sbjct: 832 FISKVASREIIVRDINRFHHFRDGSCSCGDYW 863



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 149/495 (30%), Positives = 245/495 (49%), Gaps = 61/495 (12%)

Query: 199 IDAFSVCGCVEFARK-VFDGLFNDCF---------------EEALNFFSQMRAVGFKPNN 242
           ++ +S C C   ARK V D    D                 EEAL  + +M  +G K N 
Sbjct: 89  VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148

Query: 243 FTFAFVLK----------------------------------------ACLGLDTIRVAK 262
           FTF+ VLK                                        AC GL+      
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208

Query: 263 SAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTD 322
             HG  +K  Y+ D + A ALLD+Y KSG    A  +F E+PK D++ W+ +IA     +
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHE 268

Query: 323 LSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSN 382
            +  A++L  +M    VAP+ FT  S L+ACA +  + LG Q+HS ++++ +  D FV  
Sbjct: 269 KNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGV 328

Query: 383 ALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPA 442
            L+D+Y+KCG ++++  +F   P ++ + WN++I GY   G   +AM +F+ M +E +  
Sbjct: 329 GLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEF 388

Query: 443 TEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVF 502
            + T S++L++ A   A     QVH +++K+ Y  D  VAN+L+D Y KC  + DA  VF
Sbjct: 389 NQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVF 448

Query: 503 DMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLE 562
           ++    + V++ +MI+ YS +GL  E LK++  MQ R  +P+   F  + +AC+N    E
Sbjct: 449 EVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYE 508

Query: 563 QGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           QG+      V   G+   +    S+V++  + G +D A+ +   I ++  ++ W A++G 
Sbjct: 509 QGKQ-IHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWR-GIVSWSAMIGG 566

Query: 623 CIIHNNVEIGRLSAQ 637
              H +   GR + Q
Sbjct: 567 LAQHGH---GRKALQ 578



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 142/487 (29%), Positives = 245/487 (50%), Gaps = 18/487 (3%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  S +T L +C   +D    M +H  ++K G   D F+ N LL++Y K      A  +F
Sbjct: 187 NEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVF 246

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
            E+P+ + +S+   I G  +  +   A+ L   +       + F  ++ LK   ++G  +
Sbjct: 247 YEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVK 306

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GLF 219
           L   + + + K+  + ++FVG  LID +S CG ++ AR VFD               G  
Sbjct: 307 LGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYS 366

Query: 220 NDCFE-EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
           N  ++ EA++ F+ M   G + N  T + +LK+  G       +  H  ++K+ Y+ D Y
Sbjct: 367 NCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGY 426

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           VA +LLD Y K   + +A ++FE  P +D++ ++ MI  Y+Q  L  +A++++ RM+   
Sbjct: 427 VANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRD 486

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           + P+ F F S+  ACA +   + G QIH  V++ GLLSDVF  N+L+++YAKCG ++++ 
Sbjct: 487 IKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDAS 546

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            +F E   R  V+W+ MI G  Q G   KA+ +F +ML+  +    +T  SVL AC    
Sbjct: 547 CIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAG 606

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANA-LIDMYAKCGSITDAR-LVFDMMNDWNEVSWNAM 516
            +    +   L  K           A ++D+  + G + +A  LV +M    +   W A+
Sbjct: 607 LVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGAL 666

Query: 517 ISGYSMH 523
           +    +H
Sbjct: 667 LGAARIH 673



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 132/466 (28%), Positives = 214/466 (45%), Gaps = 74/466 (15%)

Query: 284 LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
           ++LY+K      AR++  +  + D++ WS +I+ Y Q     +A+  +  M       N+
Sbjct: 89  VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148

Query: 344 FTFVSVLQACATMEGLDLGNQIHSL----------------------------------- 368
           FTF SVL+ C+    L+LG QIH +                                   
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208

Query: 369 -----VVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
                ++++G  SD F +NAL+D+YAK G  E ++ +F E PK + V+WN +I G V   
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHE 268

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN 483
           +   A+ +  KM   +V  +  T SS L+ACA++  ++ G Q+H   +K + + D  V  
Sbjct: 269 KNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGV 328

Query: 484 ALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRP 543
            LIDMY+KCG + DAR+VFD+M   + + WN++ISGYS  G   E + +F  M + G   
Sbjct: 329 GLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEF 388

Query: 544 NNLTFVGVLSACSNG---GLLEQ--------GEAY----FKSMVANYG-----------I 577
           N  T   +L + +     G  EQ        G  Y      S++ +YG            
Sbjct: 389 NQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVF 448

Query: 578 EPC----IEHYTSMVSLLGRAGHLDKAAKL---IEGIPFQPSVMIWRALLGACIIHNNVE 630
           E C    +  YTSM++   + G  ++A K+   ++    +P   I+ +L  AC   +  E
Sbjct: 449 EVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYE 508

Query: 631 IGRLSAQHILDFE-PEDEATHVLLSNIYAMARSWEKAASKEPGLSW 675
            G+    H+L      D      L N+YA   S + A+     +SW
Sbjct: 509 QGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISW 554



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 112/446 (25%), Positives = 196/446 (43%), Gaps = 48/446 (10%)

Query: 60  ATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPE 119
           +++L++C     ++    +H  ++K     D F    L+++Y K   L DA  +FD MP 
Sbjct: 293 SSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPX 352

Query: 120 RNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCV 179
           ++ I + + I GY+     +EA+ LF+ +++EG E N    +  LK          C  V
Sbjct: 353 KDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQV 412

Query: 180 FACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--------------------GLF 219
                K G+  + +V  +L+D++  C  +E A KVF+                    GL 
Sbjct: 413 HTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGL- 471

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
               EEAL  + +M+    KP+ F F+ +  AC  L      K  H   LK     D++ 
Sbjct: 472 ---GEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFA 528

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
             +L+++Y K G I +A  IF E+  + ++ WS MI   AQ      A++LF +M +  +
Sbjct: 529 GNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGI 588

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRV-GLLSDVFVSNALMDVYAKCGRMENSV 398
            PN  T VSVL AC     +    +   L+ ++ G+         ++D+  + GR++ ++
Sbjct: 589 LPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAM 648

Query: 399 ELFAESP-KRNHVTWNTM-----IVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLR 452
            L  E P + +   W  +     I   ++LG     M++    LE +   T +  +++  
Sbjct: 649 VLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLL---TLEPEKSGTHILLANIYA 705

Query: 453 ACA--------------SLAALEPGM 464
           +                SL   EPGM
Sbjct: 706 STGMWDNVAKVRRSMKNSLVKKEPGM 731


>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
          Length = 770

 Score =  523 bits (1347), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 284/736 (38%), Positives = 420/736 (57%), Gaps = 50/736 (6%)

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           + +LFDE P++        +  ++ + Q  EA+ LF  L R G   +  + +  LKV   
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKV--- 101

Query: 170 MGWAELCPCVF----------ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF 219
                 C C+F           C+ K G   +  VGT+L+D +     VE   +VFD + 
Sbjct: 102 ------CGCLFDRIVGKQVHCQCI-KCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMR 154

Query: 220 ----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKS 263
                           N   E+AL  FSQM+  G KPN FTFA VL        +     
Sbjct: 155 VKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQ 214

Query: 264 AHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDL 323
            H   +K+  +  ++V  +++++Y+KS  +S+A+ +F+ M  ++ + W+ MIA +    L
Sbjct: 215 VHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGL 274

Query: 324 SIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNA 383
            ++A ELF RMR   V   Q  F +V++ CA ++ +    Q+H  V++ G   D+ +  A
Sbjct: 275 DLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTA 334

Query: 384 LMDVYAKCGRMENSVELFAE-SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML-EEQVP 441
           LM  Y+KC  ++++ +LF      +N V+W  +I GYVQ G   +AM +F +M  EE V 
Sbjct: 335 LMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVE 394

Query: 442 ATEVTYSSVLRACAS-LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARL 500
             E T+SSVL ACA+  A++E G Q H  ++K+ +   + V++AL+ MYAK G+I  A  
Sbjct: 395 PNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANE 454

Query: 501 VFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGL 560
           VF    D + VSWN+MISGY+ HG   + LK+F+ M+ +    + +TF+GV+SAC++ GL
Sbjct: 455 VFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGL 514

Query: 561 LEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
           + +G+ YF  MV +Y I P +EHY+ MV L  RAG L+KA  LI  +PF     IWR LL
Sbjct: 515 VNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLL 574

Query: 621 GACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASK 669
            AC +H NV++G L+A+ ++  +P+D A +VLLSNIYA A +W+           K   K
Sbjct: 575 AACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKK 634

Query: 670 EPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDE 729
           E G SWIE +     F AGD SH   + I   LE L+++ + AGY PD   VL DV E+ 
Sbjct: 635 EAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEEH 694

Query: 730 KERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVH 789
           KE  L  HSE+LA+AF L   PP +PI+I+KNLR+C DCHT IK+ISKI  R+I++RD +
Sbjct: 695 KEVILSQHSERLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSN 754

Query: 790 RFHHFQDGCCSCGDFW 805
           RFHHF+ G CSCGD+W
Sbjct: 755 RFHHFKGGSCSCGDYW 770



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 146/470 (31%), Positives = 237/470 (50%), Gaps = 27/470 (5%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           +HCQ +K G   D+     L+++Y+K   + D  ++FDEM  +N +S+ + + GY  +  
Sbjct: 114 VHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGL 173

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
             +A+ LFS +  EG + NPF F A L  L + G  E    V   V K G DS  FVG +
Sbjct: 174 NEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNS 233

Query: 198 LIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPN 241
           +++ +S    V  A+ VFD +                 N    EA   F +MR  G K  
Sbjct: 234 MVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLT 293

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
              FA V+K C  +  +  AK  H   +K   + DL +  AL+  Y+K  EI +A ++F 
Sbjct: 294 QTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFC 353

Query: 302 EMPK-KDVIPWSFMIARYAQTDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQACAT-MEG 358
            M   ++V+ W+ +I+ Y Q   +  A+ LFC+M R+  V PN+FTF SVL ACA     
Sbjct: 354 MMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTAS 413

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           ++ G Q HS  ++ G  + + VS+AL+ +YAK G +E++ E+F     R+ V+WN+MI G
Sbjct: 414 VEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISG 473

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           Y Q G   K++ +F +M  + +    +T+  V+ AC     +  G +   L VK   D  
Sbjct: 474 YAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVK---DYH 530

Query: 479 VVVA----NALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
           +V      + ++D+Y++ G +  A  L+  M        W  +++   +H
Sbjct: 531 IVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVH 580



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 183/339 (53%), Gaps = 6/339 (1%)

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
           +++++F+E P++ +   + ++  +++ D + +A+ LF  +R++    +  +   VL+ C 
Sbjct: 44  HSQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCG 103

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
            +    +G Q+H   ++ G + DV V  +L+D+Y K   +E+   +F E   +N V+W +
Sbjct: 104 CLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTS 163

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
           ++ GY Q G   +A+ +FS+M  E +     T+++VL   A+  A+E G+QVH + +K+ 
Sbjct: 164 LLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSG 223

Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
            D  + V N++++MY+K   ++DA+ VFD M + N VSWN+MI+G+  +GL  E  ++F 
Sbjct: 224 LDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFY 283

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
            M+  G +     F  V+  C+N   +   +     ++ N G +  +   T+++    + 
Sbjct: 284 RMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKN-GSDFDLNIKTALMVAYSKC 342

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGR 633
             +D A KL   +    +V+ W A     II   V+ GR
Sbjct: 343 SEIDDAFKLFCMMHGVQNVVSWTA-----IISGYVQNGR 376


>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 877

 Score =  522 bits (1345), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 284/763 (37%), Positives = 414/763 (54%), Gaps = 28/763 (3%)

Query: 71  DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP-ERNTISFVTTI 129
           D      +H   +  G   D+F  N L+ +Y     + +A  +FDE   ERNT+S+   +
Sbjct: 115 DAGFGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLM 174

Query: 130 QGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHD 189
             Y  + +   AV +F  +   G + N F F+  +         E    V A V + G+D
Sbjct: 175 SAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYD 234

Query: 190 SNAFVGTALIDAFSVCGCVEFARKVF-----------DGLFNDCF-----EEALNFFSQM 233
            + F   AL+D +S  G +  A  VF           +   + C      + AL    QM
Sbjct: 235 KDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQM 294

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
           ++ G  PN FT + +LKAC G     + +  HG  +K   + D Y+A  L+D+Y K G +
Sbjct: 295 KSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLL 354

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
            +A+++F+ +P++D++ W+ +I+  +      +A+ LFCRMR+     N+ T  +VL++ 
Sbjct: 355 DDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKST 414

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
           A++E +    Q+H+L  ++G LSD  V N L+D Y KC  +  +  +F +    + + + 
Sbjct: 415 ASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFT 474

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
           +MI    Q      A+ +F +ML + +       SS+L ACASL+A E G QVH   +K 
Sbjct: 475 SMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 534

Query: 474 NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVF 533
            +  DV   NAL+  YAKCGSI DA L F  + +   VSW+AMI G + HG     L VF
Sbjct: 535 QFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVF 594

Query: 534 DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGR 593
             M      PN++T   VL AC++ GL+++ + YF SM   +GIE   EHY  M+ LLGR
Sbjct: 595 HRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGR 654

Query: 594 AGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLL 653
           AG LD A +L+  +PFQ +  +W ALL A  +H + E+GRL+A+ +   EPE   THVLL
Sbjct: 655 AGKLDDAMELVNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEPEKSGTHVLL 714

Query: 654 SNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGML 702
           +N YA A  W+  A            KEP +SW+E +  VH F  GD SH     I   L
Sbjct: 715 ANTYASAGMWDDVAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIVGDKSHPRARDIYAKL 774

Query: 703 EWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNL 762
           + L     KAGY+P++   L DV ++EKE  L  HSE+LA+AFAL   P  +PIR+ KNL
Sbjct: 775 DELGDLMTKAGYVPNVEVDLHDVDKNEKELLLSHHSERLAVAFALISTPAGAPIRVKKNL 834

Query: 763 RICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           RIC DCH A K IS IV REIIIRD++RFHHF+DG CSC D+W
Sbjct: 835 RICRDCHAAFKFISDIVSREIIIRDINRFHHFRDGACSCRDYW 877



 Score =  251 bits (642), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 166/571 (29%), Positives = 282/571 (49%), Gaps = 30/571 (5%)

Query: 78  IHCQVLKKGNCLDLFAT--NVLLNVYVKLNRLP-DATKLFDEMPERNTISFVTTIQGYTV 134
           IH  +LK G    LFA   N LL+ Y K  RLP  A ++FDE+P+   +S+ + +  Y+ 
Sbjct: 26  IHAHLLKSG----LFAVFRNHLLSFYSKC-RLPGSARRVFDEIPDPCHVSWSSLVTAYSN 80

Query: 135 SSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFV 194
           ++   +A+G F ++       N F     LK     G+      + A     G   + FV
Sbjct: 81  NAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAGFGTQ---LHALAMATGLGGDIFV 137

Query: 195 GTALIDAFSVCGCVEFARKVFD------------GLF-----NDCFEEALNFFSQMRAVG 237
             AL+  +   G V+ AR VFD            GL      ND    A+  F +M   G
Sbjct: 138 ANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGG 197

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR 297
            +PN F F+ V+ AC G   +   +  H   ++T Y+ D++ A AL+D+Y+K G+I  A 
Sbjct: 198 VQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAA 257

Query: 298 RIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATME 357
            +F ++P+ DV+ W+  I+          A+EL  +M+ + + PN FT  S+L+ACA   
Sbjct: 258 VVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSG 317

Query: 358 GLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIV 417
             +LG QIH  +V+    SD +++  L+D+YAK G ++++ ++F   P+R+ V WN +I 
Sbjct: 318 AFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALIS 377

Query: 418 GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM 477
           G     +  +A+ +F +M +E       T ++VL++ ASL A+    QVH L  K  +  
Sbjct: 378 GCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLS 437

Query: 478 DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQ 537
           D  V N LID Y KC  +  A  VF+    ++ +++ +MI+  S      + +K+F  M 
Sbjct: 438 DSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEML 497

Query: 538 QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHL 597
           ++G  P+      +L+AC++    EQG+     ++    +        ++V    + G +
Sbjct: 498 RKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAG-NALVYTYAKCGSI 556

Query: 598 DKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
           + A     G+P +  V+ W A++G    H +
Sbjct: 557 EDADLAFSGLP-EKGVVSWSAMIGGLAQHGH 586



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 143/514 (27%), Positives = 253/514 (49%), Gaps = 22/514 (4%)

Query: 31  QAALSTQQCSNSTTT--PITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNC 88
            A +   +CS++      + +   + N   ++  + +C  + DL+    +H  V++ G  
Sbjct: 175 SAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYD 234

Query: 89  LDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTL 148
            D+F  N L+++Y KL  +  A  +F ++PE + +S+   I G  +      A+ L   +
Sbjct: 235 KDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQM 294

Query: 149 HREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCV 208
              G   N F  ++ LK     G   L   +   + K   DS+ ++   L+D ++  G +
Sbjct: 295 KSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLL 354

Query: 209 EFARKVFD-----------GLFNDC-----FEEALNFFSQMRAVGFKPNNFTFAFVLKAC 252
           + A+KVFD            L + C       EAL+ F +MR  GF  N  T A VLK+ 
Sbjct: 355 DDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKST 414

Query: 253 LGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWS 312
             L+ I   +  H  A K  +  D +V   L+D Y K   ++ A R+FE+    D+I ++
Sbjct: 415 ASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFT 474

Query: 313 FMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV 372
            MI   +Q D   DA++LF  M +  + P+ F   S+L ACA++   + G Q+H+ +++ 
Sbjct: 475 SMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 534

Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMF 432
             +SDVF  NAL+  YAKCG +E++   F+  P++  V+W+ MI G  Q G   +A+ +F
Sbjct: 535 QFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVF 594

Query: 433 SKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYA 490
            +M++E +    +T +SVL AC + A L    + +  ++K  + ++    +   +ID+  
Sbjct: 595 HRMVDEHISPNHITMTSVLCAC-NHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLG 653

Query: 491 KCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
           + G + DA  LV  M    N   W A+++   +H
Sbjct: 654 RAGKLDDAMELVNSMPFQTNAAVWGALLAASRVH 687



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 6/179 (3%)

Query: 446 TYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMM 505
           T   +L   A+  +L  G  +H   +K+   +  V  N L+  Y+KC     AR VFD +
Sbjct: 6   TIGPLLTRYAATQSLLQGAHIHAHLLKSG--LFAVFRNHLLSFYSKCRLPGSARRVFDEI 63

Query: 506 NDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE 565
            D   VSW+++++ YS + +  + L  F  M+    R N      VL    + G   Q  
Sbjct: 64  PDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAGFGTQ-- 121

Query: 566 AYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACI 624
               ++    G+   I    ++V++ G  G +D+A  + +    + + + W  L+ A +
Sbjct: 122 --LHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYV 178


>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
          Length = 874

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 287/781 (36%), Positives = 442/781 (56%), Gaps = 34/781 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCL-DLFATNVLLNVYVKLNRLPDATKL 113
           +S + +  L++C    D      +HC  +K G+   ++ A   L+++Y+K   + +  ++
Sbjct: 98  DSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEV 157

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           F+ MP++N +++ + + G   +    E + LF  +  EG   NPF F + L  + S G  
Sbjct: 158 FEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGAL 217

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GL 218
           +L   V A   K G  S+ FV  +L++ ++ CG VE A+ VF+               GL
Sbjct: 218 DLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGL 277

Query: 219 -FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
             N+C  EAL  F + RA   K    T+A V+K C  L  + +A+  H C LK  + +  
Sbjct: 278 QLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTG 337

Query: 278 YVAVALLDLYTKSGEISNARRIFE-EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
            V  AL D Y+K GE+++A  IF      ++V+ W+ +I+   Q      AV LF RMR+
Sbjct: 338 NVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMRE 397

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             V PN+FT+ ++L+A  ++    L  QIH+ V++        V  AL+  Y+K G  E+
Sbjct: 398 DRVMPNEFTYSAMLKASLSI----LPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTED 453

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA- 455
           ++ +F    +++ V W+ M+  + Q G+   A  +F+KM  + +   E T SSV+ ACA 
Sbjct: 454 ALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACAC 513

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
             A ++ G Q H +++K  Y   + V++AL+ MY++ G+I  A++VF+   D + VSWN+
Sbjct: 514 PSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNS 573

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           MISGY+ HG S + ++ F  M+  G + + +TF+ V+  C++ GL+ +G+ YF SMV ++
Sbjct: 574 MISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDH 633

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS 635
            I P +EHY  MV L  RAG LD+   LI  +PF    M+WR LLGAC +H NVE+G+ S
Sbjct: 634 KINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFS 693

Query: 636 AQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHY 684
           A  +L  EP D +T+VLLSNIYA A  W+           +   KE G SWI+ +  VH 
Sbjct: 694 ADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHS 753

Query: 685 FRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALA 744
           F A D SH   + I   L+ +  + ++ GY P+ S VL D+ ED+KE  L  HSE+LALA
Sbjct: 754 FIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALA 813

Query: 745 FALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
           F L   PP +P++I+KNLR+C DCH  +K++S I  REII+RD  RFHHF  G CSCGDF
Sbjct: 814 FGLIATPPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHHFNGGACSCGDF 873

Query: 805 W 805
           W
Sbjct: 874 W 874



 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 129/412 (31%), Positives = 215/412 (52%), Gaps = 10/412 (2%)

Query: 212 RKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT 271
           R +FD        E L+ FS  R  G   ++ T + VLKAC  +    + +  H   +K 
Sbjct: 69  RVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKC 128

Query: 272 CYEM-DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVEL 330
            ++  ++    +L+D+Y K G +     +FE MPKK+V+ W+ ++   A   +  + + L
Sbjct: 129 GHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMAL 188

Query: 331 FCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAK 390
           F RMR   + PN FTF SVL A A+   LDLG ++H+  V+ G  S VFV N+LM++YAK
Sbjct: 189 FFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAK 248

Query: 391 CGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVG-KAMIMFSKMLEEQVPATEVTYSS 449
           CG +E++  +F     R+ V+WNT++ G +QL E   +A+ +F +        T+ TY++
Sbjct: 249 CGLVEDAKSVFNWMETRDMVSWNTLMAG-LQLNECELEALQLFHESRATMGKMTQSTYAT 307

Query: 450 VLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDM-MNDW 508
           V++ CA+L  L    Q+H   +K  + +   V  AL D Y+KCG + DA  +F M     
Sbjct: 308 VIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSR 367

Query: 509 NEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYF 568
           N VSW A+ISG   +G     + +F  M++    PN  T+  +L A  +   +   + + 
Sbjct: 368 NVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLS---ILPPQIHA 424

Query: 569 KSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
           + +  NY   P +   T++++   + G  + A  + + I  Q  V+ W A+L
Sbjct: 425 QVIKTNYQHIPSVG--TALLASYSKFGSTEDALSIFKMIE-QKDVVAWSAML 473



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 168/340 (49%), Gaps = 3/340 (0%)

Query: 295 NARRIFEEMPKKDV-IPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
            AR   +E+P++D  +  + ++  YA+  +  + ++ F   R+  V  +  T   VL+AC
Sbjct: 50  GARYPLDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKAC 109

Query: 354 ATMEGLDLGNQIHSLVVRVGL-LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTW 412
            ++    LG Q+H L V+ G    +V    +L+D+Y KCG +   +E+F   PK+N VTW
Sbjct: 110 RSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTW 169

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
            +++ G        + M +F +M  E +     T++SVL A AS  AL+ G +VH  +VK
Sbjct: 170 TSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVK 229

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
                 V V N+L++MYAKCG + DA+ VF+ M   + VSWN +++G  ++    E L++
Sbjct: 230 FGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQL 289

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
           F   +    +    T+  V+  C+N   L        S V  +G        T++     
Sbjct: 290 FHESRATMGKMTQSTYATVIKLCANLKQLALARQ-LHSCVLKHGFHLTGNVMTALADAYS 348

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIG 632
           + G L  A  +        +V+ W A++  CI + ++ + 
Sbjct: 349 KCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLA 388



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 183/392 (46%), Gaps = 34/392 (8%)

Query: 50  SVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD 109
           ++ +    +YAT ++ C     L  A  +H  VLK G  L       L + Y K   L D
Sbjct: 296 TMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELAD 355

Query: 110 ATKLFD-EMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLV 168
           A  +F      RN +S+   I G   +     AV LFS +  +    N F ++A LK  +
Sbjct: 356 ALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASL 415

Query: 169 SMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------- 218
           S+    L P + A V K  +     VGTAL+ ++S  G  E A  +F  +          
Sbjct: 416 SI----LPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSA 471

Query: 219 -------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKAC----LGLDTIRVAKSAHGC 267
                    DC E A   F++M   G KPN FT + V+ AC     G+D     +  H  
Sbjct: 472 MLSCHAQAGDC-EGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQ---GRQFHAI 527

Query: 268 ALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDA 327
           ++K  Y   + V+ AL+ +Y++ G I +A+ +FE    +D++ W+ MI+ YAQ   S+ A
Sbjct: 528 SIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKA 587

Query: 328 VELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL-GNQIHSLVVRVGLLSDVFVSNALM- 385
           +E F +M  + +  +  TF++V+  C T  GL + G Q    +VR   ++      A M 
Sbjct: 588 IETFRQMEASGIQMDGVTFLAVIMGC-THNGLVVEGQQYFDSMVRDHKINPTMEHYACMV 646

Query: 386 DVYAKCGRMENSVELFAESP-KRNHVTWNTMI 416
           D+Y++ G+++ ++ L  + P     + W T++
Sbjct: 647 DLYSRAGKLDETMSLIRDMPFPAGAMVWRTLL 678


>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 284/782 (36%), Positives = 436/782 (55%), Gaps = 34/782 (4%)

Query: 54  FNSHSYATS--LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           FN ++Y ++  ++S +Q  DL  A  +  ++  K    ++F+TN ++  Y+K   L +A 
Sbjct: 97  FNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHK----NIFSTNTMIMGYIKSGNLSEAR 152

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
            LFD M +R  +++   I GY  ++QF EA GLF  + R G + +  +    L       
Sbjct: 153 TLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFD 212

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF- 223
                  V + V KLG+DS   V  +L+D++     +  A ++F+ +       FN    
Sbjct: 213 SVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLT 272

Query: 224 --------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
                    EA+N F +M+ VG++P  FTFA +L A + LD I   +  HG  +K  +  
Sbjct: 273 GYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVW 332

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
           +++VA ALLD Y+K   +  A ++F EMP+ D I ++ ++  YA      +++ELF  ++
Sbjct: 333 NVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQ 392

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
                   F F ++L   A    LD+G QIHS  +    +S++ V N+L+D+YAKCG   
Sbjct: 393 FTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFG 452

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
            +  +F++   ++ V W  MI  YVQ G     + +F +M   ++ A   TY+S++RACA
Sbjct: 453 EANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACA 512

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
           SLA+L  G Q+H   + + Y  +V   +AL+DMYAKCGSI DA  +F  M   N VSWNA
Sbjct: 513 SLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNA 572

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           +IS Y+ +G     L++F+ M + G +P++++ + +L ACS+ GL+E+G  YF SM   Y
Sbjct: 573 LISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIY 632

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS 635
            + P  EHY S + +L R G  D+A KL+  +PF+P  ++W ++L +C IH N E+ + +
Sbjct: 633 KLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKA 692

Query: 636 AQHILDFEP-EDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVH 683
           A  + + +   D A +V +SNIYA A  W           E+   K P  SW+E +   H
Sbjct: 693 ANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEIKHKTH 752

Query: 684 YFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLAL 743
            F A D +H  M  I   L+ L  K  K GY PD S  L +V E+ K   L  HSE++A+
Sbjct: 753 VFTANDKTHPQMREIMKKLDELEEKMVKKGYKPDSSCALHNVDEEVKVESLKYHSERIAI 812

Query: 744 AFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGD 803
           AFAL   P  SPI ++KNLR C DCH AIK+ISKIV+REI +RD  RFHHF+DG C+C D
Sbjct: 813 AFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVRREITVRDSSRFHHFRDGFCTCRD 872

Query: 804 FW 805
           +W
Sbjct: 873 YW 874



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 200/413 (48%), Gaps = 38/413 (9%)

Query: 248 VLKACL-GLDTIRVAKSAH----GCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEE 302
           ++K C   L T   A   H       +KT +  + Y +  L+  + + G+++ AR++F+E
Sbjct: 67  IIKPCTRNLVTTLTAPKPHLHVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDE 126

Query: 303 MPKKDV-------------------------------IPWSFMIARYAQTDLSIDAVELF 331
           MP K++                               + W+ +I  YAQ +   +A  LF
Sbjct: 127 MPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLF 186

Query: 332 CRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC 391
             M +  + P+  +  ++L      + ++   Q+HS V+++G  S + VSN+L+D Y K 
Sbjct: 187 IEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKT 246

Query: 392 GRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVL 451
             +  + +LF + P+R+ VT+N ++ GY + G   +A+ +F KM E     TE T++++L
Sbjct: 247 RSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAIL 306

Query: 452 RACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEV 511
            A   L  +E G QVH   VK N+  +V VANAL+D Y+K   + +A  +F  M + + +
Sbjct: 307 TAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGI 366

Query: 512 SWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSM 571
           S+N +++ Y+ +G   E L++F  +Q  G+   N  F  +LS  +    L+ G       
Sbjct: 367 SYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQT 426

Query: 572 VANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACI 624
           +    I   +    S+V +  + G   +A ++   +  Q SV  W A++ + +
Sbjct: 427 IVTDAISEILVG-NSLVDMYAKCGEFGEANRIFSDLAIQSSVP-WTAMISSYV 477



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 13/166 (7%)

Query: 438 EQVPATEVTYSSVLRACA-----SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKC 492
           +Q   T    +++++ C      +L A +P + V    +K  ++ +   +N L+  + + 
Sbjct: 55  KQYELTLSLMNNIIKPCTRNLVTTLTAPKPHLHVDASIIKTGFNPNTYRSNFLVKSFLQR 114

Query: 493 GSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL 552
           G +  AR +FD M   N  S N MI GY   G  +E   +FD M QR      +T+  ++
Sbjct: 115 GDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQR----TAVTWTMLI 170

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLD 598
              +      +    F  M   +GI+P    + S+ +LL      D
Sbjct: 171 GGYAQNNQFREAFGLFIEM-GRHGIDP---DHVSLATLLSGFTEFD 212


>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Vitis vinifera]
          Length = 1088

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 288/816 (35%), Positives = 449/816 (55%), Gaps = 67/816 (8%)

Query: 55   NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
            ++ ++A++L+ C           +H +++  G   D F  N L+++Y K +      K+F
Sbjct: 275  DNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVF 334

Query: 115  DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
            DEM ERN +++ + I        F +A+ LF  +   G++ N F   + L  + S G A+
Sbjct: 335  DEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSIL--MASAGLAD 392

Query: 175  LCPC--VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF-- 223
            +     +   + +   +S+  +G+AL+D +S CG VE A +VF  L       +N     
Sbjct: 393  IGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAG 452

Query: 224  -------EEALNFFSQMRAV-GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
                   EEAL  +  M++  G +P+ FTF  +L  C         +  H   ++     
Sbjct: 453  YVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITK 512

Query: 276  DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
            ++ V   L+ +Y++ G ++ A+ IF  M +++   W+ MI  Y Q   + +A+ LF +M+
Sbjct: 513  NIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQ 572

Query: 336  QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
               + P+ F+  S+L +C ++     G ++H+ +VR  +  +  +   L+D+YAKCG M+
Sbjct: 573  LNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMD 632

Query: 396  -------------------------------NSVELFAESPKRNHVTWNTMIVGYVQLGE 424
                                           ++  LF +  +RN   WN+++ GY   G 
Sbjct: 633  YAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGL 692

Query: 425  VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY-DMDVVVAN 483
              ++   F +MLE  +    +T  +++  C+SL ALE G Q+H L +K  + +  VV+  
Sbjct: 693  KKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLET 752

Query: 484  ALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRP 543
            AL+DMY+KCG+IT AR VFD MN  N VSWNAMISGYS HG S E L +++ M ++G  P
Sbjct: 753  ALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYP 812

Query: 544  NNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKL 603
            N +TF+ +LSACS+ GL+E+G   F SM  +Y IE   EHYT MV LLGRAG L+ A + 
Sbjct: 813  NEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEF 872

Query: 604  IEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW 663
            +E +P +P V  W ALLGAC +H ++++GRL+AQ + + +P++   +V++SNIYA A  W
Sbjct: 873  VEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRW 932

Query: 664  E-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKA 712
            +           K   K+PG+SWIE    +  F AG  +H     I   L  L ++S+  
Sbjct: 933  KEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGL 992

Query: 713  GYIPDLSAVL---RDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCH 769
            GYIPD S +L   +D++E+E+E YL  HSE+LAL+  L  +P  S IR+ KNLRIC DCH
Sbjct: 993  GYIPDTSFILQNVKDIKEEEEEEYLLQHSERLALSLGLISLPKKSTIRVFKNLRICGDCH 1052

Query: 770  TAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            TA K ISKI  R II RD +RFHHF++G CSCGD+W
Sbjct: 1053 TATKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 1088



 Score =  286 bits (731), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 170/586 (29%), Positives = 304/586 (51%), Gaps = 21/586 (3%)

Query: 40  SNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLN 99
           S   T+  T   S+ N   Y++ +Q CI ++  Q   +IH Q++  G   D +    +L 
Sbjct: 55  SPKPTSIHTKPASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILM 114

Query: 100 VYVKLNRLPD---ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELN 156
           +Y +   L D   A KLF+EMPERN  ++ T I  Y     ++E + L+  +   G+  +
Sbjct: 115 LYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSD 174

Query: 157 PFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD 216
            F F + +K  ++M        + + V K G + N FVG AL+D ++  G ++ A    D
Sbjct: 175 KFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLD 234

Query: 217 GLFNDC----------------FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRV 260
            +                    +EEA   F +M  +G  P+NFTFA  L+ C  L +   
Sbjct: 235 EIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDG 294

Query: 261 AKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQ 320
            K  H   +   ++ D +V  AL+D+Y K  +  +  ++F+EM +++ + W+ +I+  AQ
Sbjct: 295 GKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQ 354

Query: 321 TDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFV 380
                DA+ LF RM+++    N+F   S+L A A +  +  G ++H  +VR  L SD+ +
Sbjct: 355 FGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIIL 414

Query: 381 SNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML-EEQ 439
            +AL+D+Y+KCG +E + ++F    +RN V++N ++ GYVQ G+  +A+ ++  M  E+ 
Sbjct: 415 GSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDG 474

Query: 440 VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR 499
           +   + T++++L  CA+      G Q+H   ++AN   +++V   L+ MY++CG +  A+
Sbjct: 475 IQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAK 534

Query: 500 LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGG 559
            +F+ M + N  SWN+MI GY  +G + E L++F  MQ  G +P+  +   +LS+C +  
Sbjct: 535 EIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLS 594

Query: 560 LLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
             ++G      +V N   E  I     +V +  + G +D A K+ +
Sbjct: 595 DSQKGRELHNFIVRNTMEEEGILQVV-LVDMYAKCGSMDYAWKVYD 639



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 165/626 (26%), Positives = 302/626 (48%), Gaps = 67/626 (10%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           ++ + +++CI  +D+     +   V+K G   +LF    L++ Y +   + DA    DE+
Sbjct: 177 TFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEI 236

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSM----GWA 173
              + +++   I GY     + EA G+F  + + G   + F F + L+V  ++    G  
Sbjct: 237 EGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGK 296

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD----------------- 216
           ++   + AC +K     + FVG ALID ++ C   E   KVFD                 
Sbjct: 297 QVHSKLIACGFK----GDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAE 352

Query: 217 ---GLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY 273
              G FND    AL  F +M+  G+K N F    +L A  GL  I   +  HG  ++   
Sbjct: 353 AQFGHFND----ALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLL 408

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
             D+ +  AL+D+Y+K G +  A ++F  + +++ + ++ ++A Y Q   + +A+EL+  
Sbjct: 409 NSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHD 468

Query: 334 MR-QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCG 392
           M+ +  + P+QFTF ++L  CA     + G QIH+ ++R  +  ++ V   L+ +Y++CG
Sbjct: 469 MQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECG 528

Query: 393 RMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLR 452
           R+  + E+F    +RN  +WN+MI GY Q GE  +A+ +F +M    +     + SS+L 
Sbjct: 529 RLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLS 588

Query: 453 ACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSI----------------- 495
           +C SL+  + G ++H   V+   + + ++   L+DMYAKCGS+                 
Sbjct: 589 SCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVIL 648

Query: 496 --------------TDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW 541
                          DA+ +FD M   N   WN++++GY+  GL  E    F  M +   
Sbjct: 649 NNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDI 708

Query: 542 RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPC-IEHYTSMVSLLGRAGHLDKA 600
             + LT V +++ CS+   LE G+    S++   G   C +   T++V +  + G + KA
Sbjct: 709 EYDVLTMVTIVNLCSSLPALEHGDQ-LHSLIIKKGFVNCSVVLETALVDMYSKCGAITKA 767

Query: 601 AKLIEGIPFQPSVMIWRALLGACIIH 626
             + + +  + +++ W A++     H
Sbjct: 768 RTVFDNMNGK-NIVSWNAMISGYSKH 792



 Score = 46.6 bits (109), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 75/169 (44%), Gaps = 4/169 (2%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKG--NCLDLFATNVLLNVYVKLNRLPDA 110
           E++  +  T +  C     L+    +H  ++KKG  NC  +  T  L+++Y K   +  A
Sbjct: 709 EYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLET-ALVDMYSKCGAITKA 767

Query: 111 TKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSM 170
             +FD M  +N +S+   I GY+      EA+ L+  + ++G   N   F A L      
Sbjct: 768 RTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHT 827

Query: 171 GWAELCPCVFACVYK-LGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL 218
           G  E    +F  + +    ++ A   T ++D     G +E A++  + +
Sbjct: 828 GLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKM 876


>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 905

 Score =  519 bits (1337), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 277/779 (35%), Positives = 424/779 (54%), Gaps = 28/779 (3%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +Y + L +C    +L+    IH Q++K G   D    N LL++Y K   LP A ++F
Sbjct: 127 NKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVF 186

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             +  R+ +S+ T +  Y   +   E +GLF  +  EG   +   +   L    +    +
Sbjct: 187 AGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLD 246

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCFE--- 224
               +     + G +S+  VGTAL+     CG V+ A++ F G+       +N       
Sbjct: 247 EGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALA 306

Query: 225 ------EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                 EA   + +MR+ G   N  T+  +L AC     +   K  H    +  +  D+ 
Sbjct: 307 QHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQ 366

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           +  AL+ +Y + G++  AR +F  MPK+D+I W+ +IA YA+ +   +A+ L+ +M+   
Sbjct: 367 IGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEG 426

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           V P + TF+ +L ACA       G  IH  ++R G+ S+  ++NALM++Y +CG +  + 
Sbjct: 427 VKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQ 486

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            +F  +  R+ ++WN+MI G+ Q G    A  +F +M  E++    +T++SVL  C +  
Sbjct: 487 NVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPE 546

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           ALE G Q+H    ++   +DV + NALI+MY +CGS+ DAR VF  +   + +SW AMI 
Sbjct: 547 ALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIG 606

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWR-PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
           G +  G   + +++F  MQ  G+R P+  TF  +LSAC++ GL+ +G   F SM + YG+
Sbjct: 607 GCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGV 666

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQ 637
            P IEHY  +V LLGRA    +A  LI  +PF P   +W  LLGAC IH N+ +   +A 
Sbjct: 667 LPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAAN 726

Query: 638 HILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFR 686
           + L     + A ++LLSN+YA A  W+  A            KEPG SWIE   ++H F 
Sbjct: 727 NALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFI 786

Query: 687 AGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFA 746
           A D SH +   I   L+ L+++  +AGY PD   VL D+ +  +E  L  HSE+LA+A+ 
Sbjct: 787 AADRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYG 846

Query: 747 LFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           L K PP +PIRI KNLRIC DCHTA K ISK+V REII RD +RFH F++G CSC D+W
Sbjct: 847 LIKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHSFKNGKCSCEDYW 905



 Score =  308 bits (790), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 178/588 (30%), Positives = 306/588 (52%), Gaps = 18/588 (3%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           +E +  +Y   LQ+C +   L  A  IH Q+++ G   D+F +N+L+N+YVK   + DA 
Sbjct: 23  TETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAH 82

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
           ++F EMP R+ IS+ + I  Y       +A  LF  +   G   N   + + L    S  
Sbjct: 83  QVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPA 142

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF- 223
             E    + + + K G+  +  V  +L+  +  CG +  AR+VF G+       +N    
Sbjct: 143 ELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLG 202

Query: 224 --------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
                   +E L  F QM + G  P+  T+  +L A      +   K  H   ++     
Sbjct: 203 LYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNS 262

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
           D+ V  AL+ +  + G++ +A++ F+ +  +DV+ ++ +IA  AQ   +++A E + RMR
Sbjct: 263 DIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMR 322

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
              VA N+ T++S+L AC+T + L+ G  IHS +   G  SDV + NAL+ +YA+CG + 
Sbjct: 323 SDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLP 382

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
            + ELF   PKR+ ++WN +I GY +  + G+AM ++ +M  E V    VT+  +L ACA
Sbjct: 383 KARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACA 442

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
           + +A   G  +H   +++    +  +ANAL++MY +CGS+ +A+ VF+     + +SWN+
Sbjct: 443 NSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNS 502

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           MI+G++ HG      K+F  MQ     P+N+TF  VLS C N   LE G+      +   
Sbjct: 503 MIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQ-IHGRITES 561

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGAC 623
           G++  +    +++++  R G L  A  +   +  +  VM W A++G C
Sbjct: 562 GLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHR-DVMSWTAMIGGC 608


>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g01510-like [Cucumis
           sativus]
          Length = 816

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 283/781 (36%), Positives = 435/781 (55%), Gaps = 32/781 (4%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHC-QVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           FN ++  ++ Q    N+ L+    +H  QV  +    +  + N++++ ++K  +L  A +
Sbjct: 39  FNPNTCRSNFQV---NNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARE 95

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           LFD M ER  +S+   I GY  S+Q  EA  L++ + R G E +       L     +  
Sbjct: 96  LFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELET 155

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND----------- 221
             +   +   V KLG++ N  V  +L+DA+    C+  A ++F  + N            
Sbjct: 156 KNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTG 215

Query: 222 -----CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
                  EEA+  F ++   G KP++FTFA +L A +GLD  +  +  HG  LKT +  +
Sbjct: 216 YSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWN 275

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           ++V  ALLD Y+K  ++    ++F EMP+ D I ++ +I  YA      ++ +LF +++ 
Sbjct: 276 VFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQF 335

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
                 QF F ++L    +   L +G QIH   + VG   +  V NAL+D+YAKC   + 
Sbjct: 336 TRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKE 395

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           + ++F     ++ V W  MI  YVQ G+  + + +FS M    VPA + T++S+LRACA+
Sbjct: 396 AQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACAN 455

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           LA++  G Q+H L +++ +  +V   +AL+D YAKCG +TDA   F  M + N VSWNA+
Sbjct: 456 LASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNAL 515

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           IS Y+ +G     L  F  M Q G++P++++F+ VLSACS+ G +E+   +F SM   Y 
Sbjct: 516 ISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYE 575

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
           + P  EHYTSMV +L R G  D+A KL+  +PF+PS ++W ++L +C IH N E+ + +A
Sbjct: 576 VTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAA 635

Query: 637 QHILDFEP-EDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHY 684
             + + E   D A ++ +SNIYA+A  W+  A            K P  SW+E +   H 
Sbjct: 636 DRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHV 695

Query: 685 FRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALA 744
           F A D SH +M  I   +  L+ +  K GY PD +  L DV E  K   L  HSE+ A+A
Sbjct: 696 FSANDKSHPEMKKILRKINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIA 755

Query: 745 FALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
           FAL   P  SPI ++KNLR C DCH AIK+IS+IV+REII+RD  RFHHF+DG CSCGD+
Sbjct: 756 FALMNTPDGSPIVVMKNLRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDY 815

Query: 805 W 805
           W
Sbjct: 816 W 816



 Score = 43.9 bits (102), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 20/187 (10%)

Query: 450 VLR-ACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDW 508
           VLR + A   +L     +    VK  ++ +   +N  ++ + + G +  A  VFD M   
Sbjct: 13  VLRNSPAPKPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAK 72

Query: 509 NEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYF 568
           N +S N MISG+   G  ++  ++FD M +R      +   G L +        Q +  F
Sbjct: 73  NTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQS-------NQSKEAF 125

Query: 569 K--SMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE------GIPFQPSVMIWRALL 620
           +  + +   GIEP    Y ++V+LL   G L+    +++       + ++ ++M+  +L+
Sbjct: 126 RLYADMRRGGIEP---DYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLV 182

Query: 621 GA-CIIH 626
            A C  H
Sbjct: 183 DAYCKTH 189


>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1611

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 271/694 (39%), Positives = 403/694 (58%), Gaps = 28/694 (4%)

Query: 140  EAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALI 199
            EAV  F  +       +   F   L V+  +   EL   +   V + G D    VG  LI
Sbjct: 918  EAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLI 977

Query: 200  DAFSVCGCVEFARKVF-----------DGLFNDC----FEE-ALNFFSQMRAVGFKPNNF 243
            + +   G V  AR VF           + + + C     EE ++  F  +      P+ F
Sbjct: 978  NMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQF 1037

Query: 244  TFAFVLKACLGLDT-IRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEE 302
            T A VL+AC  L+    +A   H CA+K    +D +V+ AL+D+Y+K G++  A  +F  
Sbjct: 1038 TVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVN 1097

Query: 303  MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG 362
                D+  W+ ++  Y  +     A+ L+  M+++    +Q T V+  +A   + GL  G
Sbjct: 1098 QDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQG 1157

Query: 363  NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
             QIH++VV+ G   D+FV++ ++D+Y KCG ME++  +F+E P  + V W TMI G V+ 
Sbjct: 1158 KQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVEN 1217

Query: 423  GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
            G+   A+  + +M   +V   E T++++++AC+ L ALE G Q+H   VK N   D  V 
Sbjct: 1218 GQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVM 1277

Query: 483  NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
             +L+DMYAKCG+I DAR +F   N     SWNAMI G + HG + E L+ F  M+ RG  
Sbjct: 1278 TSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVM 1337

Query: 543  PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
            P+ +TF+GVLSACS+ GL+ +    F SM  NYGIEP IEHY+ +V  L RAG +++A K
Sbjct: 1338 PDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEK 1397

Query: 603  LIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARS 662
            +I  +PF+ S  ++R LL AC +  + E G+  A+ +L  EP D A +VLLSN+YA A  
Sbjct: 1398 VISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQ 1457

Query: 663  WEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRK 711
            WE  AS           K+PG SW++ +  VH F AGD SH + ++I   +E++  + R+
Sbjct: 1458 WENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRIRE 1517

Query: 712  AGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTA 771
             GY+PD    L DV E++KE  L+ HSEKLA+A+ L K PPS+ +R+IKNLR+C DCH+A
Sbjct: 1518 EGYVPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHSA 1577

Query: 772  IKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            IK ISK+ +REI++RD +RFHHF++G CSCGD+W
Sbjct: 1578 IKYISKVFKREIVLRDANRFHHFRNGICSCGDYW 1611



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 168/618 (27%), Positives = 283/618 (45%), Gaps = 58/618 (9%)

Query: 38   QCSNSTTTPITFSVSEFNSHSYATS-LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNV 96
            + + ST  P+T      +S     S L+  I   DL      H ++L  G+  D F TN 
Sbjct: 637  RAATSTANPLTPRAHLIHSLPQCFSILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNN 696

Query: 97   LLNVYVKLNRLPDATKLFDEMPE--RNTISFVTTIQGYTV-SSQFVEAVGLFSTLHREGH 153
            L+ +Y K   L  A KLFD  P+  R+ +++   +      + +  +   LF  L R   
Sbjct: 697  LITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVV 756

Query: 154  ELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARK 213
                       K+ +          +     K+G   + FV  AL++ ++  G +  AR 
Sbjct: 757  STTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARV 816

Query: 214  VFDGL---------------FNDCFE-EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDT 257
            +FDG+                + C E EA+  FS+    GF+P++ T          L T
Sbjct: 817  LFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVT----------LRT 866

Query: 258  I-RVAKSAHGCALKTCYEMDLYVAVAL-LDLYTKSGEISNARRIFEEMPKKDVIPWSFMI 315
            + RV K       K   E+  + A A  L +Y   G               DVI W+  +
Sbjct: 867  LSRVVKCK-----KNILELKQFKAYATKLFMYDDDG--------------SDVIVWNKAL 907

Query: 316  ARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLL 375
            +R+ Q   + +AV+ F  M  + VA +  TFV +L   A +  L+LG QIH +V+R GL 
Sbjct: 908  SRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLD 967

Query: 376  SDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKM 435
              V V N L+++Y K G +  +  +F +  + + ++WNTMI G    G    ++ MF  +
Sbjct: 968  QVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHL 1027

Query: 436  LEEQVPATEVTYSSVLRACASL-AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGS 494
            L + +   + T +SVLRAC+SL        Q+H   +KA   +D  V+ ALID+Y+K G 
Sbjct: 1028 LRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGK 1087

Query: 495  ITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSA 554
            + +A  +F   + ++  SWNA++ GY + G   + L+++ LMQ+ G R + +T V    A
Sbjct: 1088 MEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKA 1147

Query: 555  CSNGGL--LEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
               GGL  L+QG+    ++V   G    +   + ++ +  + G ++ A ++   IP  P 
Sbjct: 1148 A--GGLVGLKQGKQ-IHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIP-SPD 1203

Query: 613  VMIWRALLGACIIHNNVE 630
             + W  ++  C+ +   E
Sbjct: 1204 DVAWTTMISGCVENGQEE 1221



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 116/250 (46%), Gaps = 17/250 (6%)

Query: 72   LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
            L+    IH  V+K+G  LDLF T+ +L++Y+K   +  A ++F E+P  + +++ T I G
Sbjct: 1154 LKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISG 1213

Query: 132  YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSN 191
               + Q   A+  +  +     + + + F   +K    +   E    + A + KL    +
Sbjct: 1214 CVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFD 1273

Query: 192  AFVGTALIDAFSVCGCVEFARKVFD---------------GLF-NDCFEEALNFFSQMRA 235
             FV T+L+D ++ CG +E AR +F                GL  +   +EAL FF  M++
Sbjct: 1274 PFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKS 1333

Query: 236  VGFKPNNFTFAFVLKACLGLDTIRVA-KSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
             G  P+  TF  VL AC     +  A ++ +        E ++     L+D  +++G I 
Sbjct: 1334 RGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIE 1393

Query: 295  NARRIFEEMP 304
             A ++   MP
Sbjct: 1394 EAEKVISSMP 1403



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 17/208 (8%)

Query: 449 SVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDW 508
           S+LR   + + L  G + H   + + +  D  V N LI MYAKCGS++ AR +FD   D 
Sbjct: 661 SILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDT 720

Query: 509 NE--VSWNAMISGYSMHG-LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE 565
           N   V+WNA++S  + H   S +   +F L+++        T   V   C    LL    
Sbjct: 721 NRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMC----LLSASP 776

Query: 566 AYFKSM---VANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           +  +S+       G++  +    ++V++  + G + +A  L +G+  +  V++W  ++ A
Sbjct: 777 SASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVR-DVVLWNVMMKA 835

Query: 623 ----CIIHNNVEIGRLSAQHILDFEPED 646
               C+ +  + +   S  H   F P+D
Sbjct: 836 YVDTCLEYEAMLL--FSEFHRTGFRPDD 861



 Score = 46.2 bits (108), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 46/200 (23%), Positives = 80/200 (40%), Gaps = 7/200 (3%)

Query: 23   AWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQV 82
            AW   +S       ++ +  T   +  S  + + +++AT +++C     L+    IH  +
Sbjct: 1206 AWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANI 1265

Query: 83   LKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAV 142
            +K     D F    L+++Y K   + DA  LF     R   S+   I G        EA+
Sbjct: 1266 VKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEAL 1325

Query: 143  GLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKL----GHDSNAFVGTAL 198
              F  +   G  + P   T F+ VL +   + L    +   Y +    G +      + L
Sbjct: 1326 QFFKYMKSRG--VMPDRVT-FIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCL 1382

Query: 199  IDAFSVCGCVEFARKVFDGL 218
            +DA S  G +E A KV   +
Sbjct: 1383 VDALSRAGRIEEAEKVISSM 1402


>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Cucumis sativus]
          Length = 816

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 283/781 (36%), Positives = 435/781 (55%), Gaps = 32/781 (4%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHC-QVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           FN ++  ++ Q    N+ L+    +H  QV  +    +  + N++++ ++K  +L  A +
Sbjct: 39  FNPNTCRSNFQV---NNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARE 95

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           LFD M ER  +S+   I GY  S+Q  EA  L++ + R G E +       L     +  
Sbjct: 96  LFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELET 155

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND----------- 221
             +   +   V KLG++ N  V  +L+DA+    C+  A ++F  + N            
Sbjct: 156 KNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTG 215

Query: 222 -----CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
                  EEA+  F ++   G KP++FTFA +L A +GLD  +  +  HG  LKT +  +
Sbjct: 216 YSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWN 275

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           ++V  ALLD Y+K  ++    ++F EMP+ D I ++ +I  YA      ++ +LF +++ 
Sbjct: 276 VFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQF 335

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
                 QF F ++L    +   L +G QIH   + VG   +  V NAL+D+YAKC   + 
Sbjct: 336 TRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKE 395

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           + ++F     ++ V W  MI  YVQ G+  + + +FS M    VPA + T++S+LRACA+
Sbjct: 396 AQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACAN 455

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           LA++  G Q+H L +++ +  +V   +AL+D YAKCG +TDA   F  M + N VSWNA+
Sbjct: 456 LASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNAL 515

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           IS Y+ +G     L  F  M Q G++P++++F+ VLSACS+ G +E+   +F SM   Y 
Sbjct: 516 ISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYE 575

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
           + P  EHYTSMV +L R G  D+A KL+  +PF+PS ++W ++L +C IH N E+ + +A
Sbjct: 576 VTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAA 635

Query: 637 QHILDFEP-EDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHY 684
             + + E   D A ++ +SNIYA+A  W+  A            K P  SW+E +   H 
Sbjct: 636 DRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHV 695

Query: 685 FRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALA 744
           F A D SH +M  I   +  L+ +  K GY PD +  L DV E  K   L  HSE+ A+A
Sbjct: 696 FSANDKSHPEMKKILRKINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIA 755

Query: 745 FALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
           FAL   P  SPI ++KNLR C DCH AIK+IS+IV+REII+RD  RFHHF+DG CSCGD+
Sbjct: 756 FALMNTPDGSPIVVMKNLRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDY 815

Query: 805 W 805
           W
Sbjct: 816 W 816



 Score = 43.5 bits (101), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 20/187 (10%)

Query: 450 VLR-ACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDW 508
           VLR + A   +L     +    VK  ++ +   +N  ++ + + G +  A  VFD M   
Sbjct: 13  VLRNSPAPKPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAK 72

Query: 509 NEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYF 568
           N +S N MISG+   G  ++  ++FD M +R      +   G L +        Q +  F
Sbjct: 73  NTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQS-------NQSKEAF 125

Query: 569 K--SMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE------GIPFQPSVMIWRALL 620
           +  + +   GIEP    Y ++V+LL   G L+    +++       + ++ ++M+  +L+
Sbjct: 126 RLYADMRRGGIEP---DYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLV 182

Query: 621 GA-CIIH 626
            A C  H
Sbjct: 183 DAYCKTH 189


>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 872

 Score =  517 bits (1332), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 287/758 (37%), Positives = 421/758 (55%), Gaps = 34/758 (4%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           +HCQ +K G   D+     L++ Y+K +   D   +FDEM ERN +++ T I GY  +S 
Sbjct: 119 LHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSL 178

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
             E + LF  +  EG + N F F A L VL   G       V   V K G D    V  +
Sbjct: 179 NEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNS 238

Query: 198 LIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPN 241
           LI+ +  CG V  AR +FD                   N    EAL  F  MR    + +
Sbjct: 239 LINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLS 298

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
             +FA ++K C  L  +R  +  H   +K  +  D  +  AL+  Y+K   + +A R+F+
Sbjct: 299 ESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFK 358

Query: 302 EMP-KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLD 360
           E     +V+ W+ MI+ + Q D   +AV LF  M++  V PN+FT+  +L A   +    
Sbjct: 359 ETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISP-- 416

Query: 361 LGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYV 420
             +++H+ VV+        V  AL+D Y K G+++ + ++F+    ++ V W+ M+ GY 
Sbjct: 417 --SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYA 474

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA-SLAALEPGMQVHCLTVKANYDMDV 479
           Q GE   A+ +FS++ +  V   E T+SS+L  CA + A++  G Q H   +K+  D  +
Sbjct: 475 QAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSL 534

Query: 480 VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
            V++AL+ MYAK G I  A  VF    + + VSWN+MISGY+ HG + + L VF  M++R
Sbjct: 535 CVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKR 594

Query: 540 GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDK 599
             + +++TF+GV +AC++ GL+E+GE YF  MV +  I P  EH + MV L  RAG L+K
Sbjct: 595 KVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEK 654

Query: 600 AAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAM 659
           A K+I+ +P      IWR +L AC +H   E+GRL+A+ I+   PED A +VLLSN+YA 
Sbjct: 655 AMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAAYVLLSNMYAE 714

Query: 660 ARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMK 708
           +  W           E+   KEPG SWIE +   + F AGD SH   + I   LE L+ +
Sbjct: 715 SGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQIYMKLEDLSTR 774

Query: 709 SRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDC 768
            +  GY PD S VL+D+ ++ KE  L  HSE+LA+AF L   P  SP+ IIKNLR+C DC
Sbjct: 775 LKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDC 834

Query: 769 HTAIKIISKIVQREIIIRDVHRFHHF-QDGCCSCGDFW 805
           H  IK+I+KI +REI++RD +RFHHF  DG CSCGDFW
Sbjct: 835 HVVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 872



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 153/545 (28%), Positives = 272/545 (49%), Gaps = 34/545 (6%)

Query: 105 NRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFL 164
           +RL  A  LFD+ P+R+  S+ + + G++   +  EA  LF  +   G E++   F++ L
Sbjct: 45  SRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVL 104

Query: 165 KVLVSM-----GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL- 218
           KV  ++     G    C C+     K G   +  VGT+L+D +      +  R VFD + 
Sbjct: 105 KVSATLCDELFGRQLHCQCI-----KFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMK 159

Query: 219 ---------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKS 263
                           N   EE L  F +M+  G +PN+FTFA  L              
Sbjct: 160 ERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQ 219

Query: 264 AHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDL 323
            H   +K   +  + V+ +L++LY K G +  AR +F++   K V+ W+ MI+ YA   L
Sbjct: 220 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 279

Query: 324 SIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNA 383
            ++A+ +F  MR   V  ++ +F S+++ CA ++ L    Q+H  VV+ G + D  +  A
Sbjct: 280 DLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTA 339

Query: 384 LMDVYAKCGRMENSVELFAESP-KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPA 442
           LM  Y+KC  M +++ LF E+    N V+W  MI G++Q     +A+ +FS+M  + V  
Sbjct: 340 LMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRP 399

Query: 443 TEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVF 502
            E TYS +L A   L  + P  +VH   VK NY+    V  AL+D Y K G + +A  VF
Sbjct: 400 NEFTYSVILTA---LPVISPS-EVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVF 455

Query: 503 DMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSAC-SNGGLL 561
             +++ + V+W+AM++GY+  G +   +K+F  + + G +PN  TF  +L+ C +    +
Sbjct: 456 SGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASM 515

Query: 562 EQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLG 621
            QG+  F        ++  +   ++++++  + GH++ A ++ +    +  ++ W +++ 
Sbjct: 516 GQGKQ-FHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKR-QREKDLVSWNSMIS 573

Query: 622 ACIIH 626
               H
Sbjct: 574 GYAQH 578



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 142/494 (28%), Positives = 247/494 (50%), Gaps = 34/494 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           NS ++A +L    +       + +H  V+K G    +  +N L+N+Y+K   +  A  LF
Sbjct: 197 NSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILF 256

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D+   ++ +++ + I GY  +   +EA+G+F ++      L+  +F + +K+  ++    
Sbjct: 257 DKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELR 316

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG----------------- 217
               +   V K G   +  + TAL+ A+S C  +  A ++F                   
Sbjct: 317 FTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGF 376

Query: 218 LFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
           L ND  EEA+  FS+M+  G +PN FT++ +L A   +    V    H   +KT YE   
Sbjct: 377 LQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISPSEV----HAQVVKTNYERSS 432

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
            V  ALLD Y K G++  A ++F  +  KD++ WS M+A YAQ   +  A+++F  + + 
Sbjct: 433 TVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKG 492

Query: 338 FVAPNQFTFVSVLQAC-ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
            V PN+FTF S+L  C AT   +  G Q H   ++  L S + VS+AL+ +YAK G +E+
Sbjct: 493 GVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIES 552

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           + E+F    +++ V+WN+MI GY Q G+  KA+ +F +M + +V    VT+  V  AC  
Sbjct: 553 AEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTH 612

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVA------NALIDMYAKCGSITDARLVFDMM-NDWN 509
              +E G +   + V+     D  +A      + ++D+Y++ G +  A  V D M N   
Sbjct: 613 AGLVEEGEKYFDIMVR-----DCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAG 667

Query: 510 EVSWNAMISGYSMH 523
              W  +++   +H
Sbjct: 668 STIWRTILAACRVH 681



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/375 (26%), Positives = 184/375 (49%), Gaps = 3/375 (0%)

Query: 290 SGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSV 349
           S  +  A  +F++ P +D   ++ ++  +++   + +A  LF  ++   +  +   F SV
Sbjct: 44  SSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSV 103

Query: 350 LQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNH 409
           L+  AT+     G Q+H   ++ G L DV V  +L+D Y K    ++   +F E  +RN 
Sbjct: 104 LKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNV 163

Query: 410 VTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCL 469
           VTW T+I GY +     + + +F +M +E       T+++ L   A       G+QVH +
Sbjct: 164 VTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTV 223

Query: 470 TVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEV 529
            VK   D  + V+N+LI++Y KCG++  AR++FD     + V+WN+MISGY+ +GL  E 
Sbjct: 224 VVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEA 283

Query: 530 LKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVS 589
           L +F  M+    R +  +F  ++  C+N   L   E    S+V  YG        T+++ 
Sbjct: 284 LGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVV-KYGFVFDQNIRTALMV 342

Query: 590 LLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE--IGRLSAQHILDFEPEDE 647
              +   +  A +L +   F  +V+ W A++   + ++  E  +G  S        P + 
Sbjct: 343 AYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEF 402

Query: 648 ATHVLLSNIYAMARS 662
              V+L+ +  ++ S
Sbjct: 403 TYSVILTALPVISPS 417


>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
 gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
          Length = 878

 Score =  517 bits (1331), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 287/745 (38%), Positives = 412/745 (55%), Gaps = 33/745 (4%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D+     L+++Y+K + + D  K+F+ MP+RN +++ + + GY       + + LF  + 
Sbjct: 138 DVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMR 197

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
            EG   N   F + L V+ S G  +L   V A   K G  S  FV  +L++ ++ CG VE
Sbjct: 198 AEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVE 257

Query: 210 FARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL 253
            AR VF G+                 N    EAL  F   R+        T+A V+K C 
Sbjct: 258 EARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCA 317

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWS 312
            +  + +A+  H   LK  +     V  AL+D Y+K+G++ NA  IF  M   ++V+ W+
Sbjct: 318 NIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWT 377

Query: 313 FMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV 372
            MI    Q      A  LF RMR+  VAPN FT+ ++L A        L  QIH+ V++ 
Sbjct: 378 AMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTASVA----SLPPQIHAQVIKT 433

Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMF 432
                  V  AL+  Y+K    E ++ +F    +++ V+W+ M+  Y Q G+   A  +F
Sbjct: 434 NYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIF 493

Query: 433 SKMLEEQVPATEVTYSSVLRACAS-LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAK 491
            KM    +   E T SSV+ ACAS  A ++ G Q H +++K      + V++AL+ MYA+
Sbjct: 494 IKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYAR 553

Query: 492 CGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGV 551
            GSI  A+ +F+   D + VSWN+M+SGY+ HG S + L VF  M+  G   + +TF+ V
Sbjct: 554 KGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSV 613

Query: 552 LSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQP 611
           +  C++ GL+E+G+ YF SM  +YGI P +EHY  MV L  RAG LD+A  LIEG+ F  
Sbjct: 614 IMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPA 673

Query: 612 SVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE------- 664
             M+WR LLGAC +H NVE+G+L+A+ +L  EP D AT+VLLSNIY+ A  W+       
Sbjct: 674 GPMVWRTLLGACKVHKNVELGKLAAEKLLSLEPFDSATYVLLSNIYSAAGKWKEKDEVRK 733

Query: 665 ----KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSA 720
               K   KE G SWI+ +  VH F A D SH     I   L  +  K ++ GY PD S 
Sbjct: 734 LMDTKKVKKEAGCSWIQIKNKVHSFIASDKSHPLSEQIYAKLRAMTTKLKQEGYCPDTSF 793

Query: 721 VLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQ 780
            L +V E++KE  L +HSE+LALAF L   PP +P+ I KNLR+C DCHT IK++SKI  
Sbjct: 794 ALHEVAEEQKEAMLAMHSERLALAFGLIATPPGAPLHIFKNLRVCGDCHTVIKMVSKIED 853

Query: 781 REIIIRDVHRFHHFQDGCCSCGDFW 805
           REI++RD  RFHHF  G CSCGDFW
Sbjct: 854 REIVMRDCSRFHHFNSGVCSCGDFW 878



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 154/533 (28%), Positives = 260/533 (48%), Gaps = 25/533 (4%)

Query: 92  FATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHR- 150
            A +V L     LN    A + FDE+P RNT+     +  +       +A+  F  +HR 
Sbjct: 39  LACSVPLENQTNLNDATGARQAFDEIPHRNTLDH--ALFDHARRGSVHQALDHFLDVHRC 96

Query: 151 EGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHD-SNAFVGTALIDAFSVCGCVE 209
            G  +   A    LKV  S+    L   +     + GHD  +  VGT+L+D +     V 
Sbjct: 97  HGGRVGGGALVGVLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVV 156

Query: 210 FARKVFD---------------GLFND-CFEEALNFFSQMRAVGFKPNNFTFAFVLKACL 253
             RKVF+               G   D    + +  F +MRA G  PN+ TFA VL    
Sbjct: 157 DGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVA 216

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSF 313
               + + +  H  ++K      ++V  +L+++Y K G +  AR +F  M  +D++ W+ 
Sbjct: 217 SQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNT 276

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
           ++A        ++A++LF   R +     Q T+ +V++ CA ++ L L  Q+HS V++ G
Sbjct: 277 LMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRG 336

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELF-AESPKRNHVTWNTMIVGYVQLGEVGKAMIMF 432
             S   V  ALMD Y+K G++ N++++F   S  +N V+W  MI G +Q G+V  A  +F
Sbjct: 337 FHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALF 396

Query: 433 SKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKC 492
           S+M E+ V   + TYS++L   AS+A+L P  Q+H   +K NY+   +V  AL+  Y+K 
Sbjct: 397 SRMREDGVAPNDFTYSTIL--TASVASLPP--QIHAQVIKTNYECTSIVGTALLASYSKL 452

Query: 493 GSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL 552
            +  +A  +F M++  + VSW+AM++ Y+  G S     +F  M   G +PN  T   V+
Sbjct: 453 CNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVI 512

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
            AC++          F ++   +     +   +++VS+  R G ++ A  + E
Sbjct: 513 DACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFE 565



 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 140/490 (28%), Positives = 237/490 (48%), Gaps = 26/490 (5%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           NS ++A+ L        +     +H Q +K G C  +F  N L+N+Y K   + +A  +F
Sbjct: 204 NSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVF 263

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             M  R+ +S+ T + G  ++   +EA+ LF         L    +   +K+  ++    
Sbjct: 264 CGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLG 323

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF------------DGLFNDC 222
           L   + + V K G  S   V TAL+DA+S  G +  A  +F              + N C
Sbjct: 324 LARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGC 383

Query: 223 FEE-----ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
            +      A   FS+MR  G  PN+FT++ +L A +      +    H   +KT YE   
Sbjct: 384 IQNGDVPLAAALFSRMREDGVAPNDFTYSTILTASVA----SLPPQIHAQVIKTNYECTS 439

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
            V  ALL  Y+K      A  IF+ + +KDV+ WS M+  YAQ   S  A  +F +M   
Sbjct: 440 IVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMH 499

Query: 338 FVAPNQFTFVSVLQACAT-MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
            + PN+FT  SV+ ACA+   G+DLG Q H++ ++      + VS+AL+ +YA+ G +E+
Sbjct: 500 GLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIES 559

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           +  +F     R+ V+WN+M+ GY Q G   KA+ +F +M  E +    VT+ SV+  CA 
Sbjct: 560 AQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAH 619

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSW 513
              +E G Q +  ++  +Y +   + +   ++D+Y++ G + +A  L+  M      + W
Sbjct: 620 AGLVEEG-QRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVW 678

Query: 514 NAMISGYSMH 523
             ++    +H
Sbjct: 679 RTLLGACKVH 688



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 101/391 (25%), Positives = 179/391 (45%), Gaps = 32/391 (8%)

Query: 50  SVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD 109
           S++     +YAT ++ C     L  A  +H  VLK+G          L++ Y K  +L +
Sbjct: 300 SITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGN 359

Query: 110 ATKLFDEMP-ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLV 168
           A  +F  M   +N +S+   I G   +     A  LFS +  +G   N F ++  L   V
Sbjct: 360 ALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTASV 419

Query: 169 SMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND------- 221
               A L P + A V K  ++  + VGTAL+ ++S     E A  +F  +          
Sbjct: 420 ----ASLPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSA 475

Query: 222 ---CFEE------ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDT-IRVAKSAHGCALKT 271
              C+ +      A N F +M   G KPN FT + V+ AC      + + +  H  ++K 
Sbjct: 476 MLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKH 535

Query: 272 CYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELF 331
                L V+ AL+ +Y + G I +A+ IFE    +D++ W+ M++ YAQ   S  A+++F
Sbjct: 536 RCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVF 595

Query: 332 CRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR-VGLLSDVFVSNALMDVYAK 390
            +M    +  +  TF+SV+  CA    ++ G +    + R  G+   +     ++D+Y++
Sbjct: 596 RQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSR 655

Query: 391 CGRMENSVEL-----FAESPKRNHVTWNTMI 416
            G+++ ++ L     F   P    + W T++
Sbjct: 656 AGKLDEAMSLIEGMSFPAGP----MVWRTLL 682


>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Vitis vinifera]
 gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
          Length = 743

 Score =  517 bits (1331), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 295/794 (37%), Positives = 436/794 (54%), Gaps = 97/794 (12%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +S+ YA+ L+ C ++ +   A  +HC +LK     + F +N L+  Y KL  L  A  +F
Sbjct: 4   SSNYYASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVF 63

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D +P+ N  S+ T +  Y+        +GL S + ++   L PF       + +S G+A 
Sbjct: 64  DHIPQPNLFSWNTILSVYS-------KLGLLSQM-QQIFNLMPFRDGVSWNLAIS-GYAN 114

Query: 175 LCPCVFAC-VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQM 233
              C  A  VYKL           L DA                        A+N     
Sbjct: 115 YGSCSDAVRVYKL----------MLKDA------------------------AMNL---- 136

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
                  N  TF+ +L  C     + + +  +G  LK  +  D++V   L+D+YTK G I
Sbjct: 137 -------NRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLI 189

Query: 294 SNARRIFEEMPKKDV-------------------------------IPWSFMIARYAQTD 322
            +A+R F+EMP+++V                               I W+ MI    Q  
Sbjct: 190 YDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNG 249

Query: 323 LSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSN 382
           L  +A+++F  MR A  A +QFTF SVL AC ++  L  G QIH+ V+R     +VFV +
Sbjct: 250 LEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGS 309

Query: 383 ALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPA 442
           AL+D+Y+KC  ++++  +F   P++N ++W  M+VGY Q G   +A+ +F +M    V  
Sbjct: 310 ALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEP 369

Query: 443 TEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVF 502
            + T  SV+ +CA+LA+LE G Q HC  + +     + V+NALI +Y KCGS  ++  +F
Sbjct: 370 DDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLF 429

Query: 503 DMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLE 562
             MN  +EVSW A+++GY+  G + E + +F+ M   G +P+ +TF+GVLSACS  GL+E
Sbjct: 430 TEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVE 489

Query: 563 QGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           +G  YF+SM+  +GI P ++H T ++ LLGRAG L++A   I  +P  P V+ W  LL +
Sbjct: 490 KGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSS 549

Query: 623 CIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEP 671
           C +H ++EIG+ +A  ++  EP++ A++VLLS++YA    W+K A            KEP
Sbjct: 550 CRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKEP 609

Query: 672 GLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKE 731
           G SWI+ +G VH F A D S   +  I   LE LN K  + GY+PD+S+VL DV E EK 
Sbjct: 610 GYSWIKYKGKVHVFSADDQSSPFLGQIYAELEKLNYKMIEEGYVPDMSSVLHDVEESEKI 669

Query: 732 RYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRF 791
           + L  HSEKLA+AF L  +PP  PIR+IKNLR+C DCH A K ISKI QREI++RD  RF
Sbjct: 670 KMLNHHSEKLAIAFGLIFVPPGLPIRVIKNLRVCGDCHNATKFISKITQREILVRDAVRF 729

Query: 792 HHFQDGCCSCGDFW 805
           H F+DG CSCGDFW
Sbjct: 730 HLFKDGTCSCGDFW 743


>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
          Length = 877

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 279/763 (36%), Positives = 413/763 (54%), Gaps = 28/763 (3%)

Query: 71  DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM-PERNTISFVTTI 129
           D +    +H   +  G   D+F  N L+ +Y     + DA ++F+E   ERN +S+   +
Sbjct: 115 DARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLM 174

Query: 130 QGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHD 189
             Y  + Q  +A+ +F  +   G +   F F+  +         E    V A V ++G+D
Sbjct: 175 SAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYD 234

Query: 190 SNAFVGTALIDAFSVCGCVEFARKVFD-----------GLFNDCF-----EEALNFFSQM 233
            + F   AL+D +   G V+ A  +F+            L + C        A+    QM
Sbjct: 235 KDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM 294

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
           +  G  PN FT + +LKAC G     + +  HG  +K   + D Y+ V L+D+Y K+  +
Sbjct: 295 KYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFL 354

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
            +AR++F+ M  +D+I  + +I+  +      +A+ LF  +R+  +  N+ T  +VL++ 
Sbjct: 355 DDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKST 414

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
           A++E      Q+H+L V++G + D  V N L+D Y KC  + ++  +F E    + +   
Sbjct: 415 ASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACT 474

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
           +MI    Q      A+ +F +ML + +       SS+L ACASL+A E G QVH   +K 
Sbjct: 475 SMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 534

Query: 474 NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVF 533
            +  D    NAL+  YAKCGSI DA L F  + +   VSW+AMI G + HG     L++F
Sbjct: 535 QFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELF 594

Query: 534 DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGR 593
             M   G  PN++T   VL AC++ GL+++ + YF SM   +GI+   EHY+ M+ LLGR
Sbjct: 595 GRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGR 654

Query: 594 AGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLL 653
           AG LD A +L+  +PFQ +  IW ALLGA  +H + E+G+L+A+ +   EPE   THVLL
Sbjct: 655 AGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLL 714

Query: 654 SNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGML 702
           +N YA A  W + A            KEP +SWIE +  VH F  GD SH     I   L
Sbjct: 715 ANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKL 774

Query: 703 EWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNL 762
             L     KAG++P++   L D+   EKE  L  HSE+LA+AFAL   PP +PIR+ KNL
Sbjct: 775 VELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNL 834

Query: 763 RICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           RIC DCH A K ISKIV REIIIRD++RFHHF+DG CSCGD+W
Sbjct: 835 RICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 159/568 (27%), Positives = 272/568 (47%), Gaps = 24/568 (4%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           +H  +LK G+       N L++ Y K  R   A + FDE+P+   +S+ + +  Y+ +  
Sbjct: 26  LHASLLKSGSLASF--RNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNNGL 83

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
              A+  F  +  EG   N FA    LK +     A L   V A     G  S+ FV  A
Sbjct: 84  PRSAIQAFHGMRAEGVCCNEFALPVVLKCVPD---ARLGAQVHAMAMATGFGSDVFVANA 140

Query: 198 LIDAFSVCGCVEFARKVF------------DGLF-----NDCFEEALNFFSQMRAVGFKP 240
           L+  +   G ++ AR+VF            +GL      ND   +A+  F +M   G +P
Sbjct: 141 LVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQP 200

Query: 241 NNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIF 300
             F F+ V+ AC G   I   +  H   ++  Y+ D++ A AL+D+Y K G +  A  IF
Sbjct: 201 TEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIF 260

Query: 301 EEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLD 360
           E+MP  DV+ W+ +I+          A+EL  +M+ + + PN FT  S+L+AC+     D
Sbjct: 261 EKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFD 320

Query: 361 LGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYV 420
           LG QIH  +++    SD ++   L+D+YAK   ++++ ++F     R+ +  N +I G  
Sbjct: 321 LGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCS 380

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV 480
             G   +A+ +F ++ +E +     T ++VL++ ASL A     QVH L VK  +  D  
Sbjct: 381 HGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAH 440

Query: 481 VANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG 540
           V N LID Y KC  ++DA  VF+  +  + ++  +MI+  S        +K+F  M ++G
Sbjct: 441 VVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKG 500

Query: 541 WRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKA 600
             P+      +L+AC++    EQG+     ++    +        ++V    + G ++ A
Sbjct: 501 LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAG-NALVYTYAKCGSIEDA 559

Query: 601 AKLIEGIPFQPSVMIWRALLGACIIHNN 628
                 +P +  V+ W A++G    H +
Sbjct: 560 ELAFSSLP-ERGVVSWSAMIGGLAQHGH 586



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 141/513 (27%), Positives = 256/513 (49%), Gaps = 22/513 (4%)

Query: 32  AALSTQQCSNSTTT--PITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCL 89
           A +   QC ++      + +S  +     ++  + +C  + +++    +H  V++ G   
Sbjct: 176 AYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDK 235

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D+F  N L+++Y+K+ R+  A+ +F++MP+ + +S+   I G  ++     A+ L   + 
Sbjct: 236 DVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMK 295

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
             G   N F  ++ LK     G  +L   +   + K   DS+ ++G  L+D ++    ++
Sbjct: 296 YSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLD 355

Query: 210 FARKVFDGLFN-----------DC-----FEEALNFFSQMRAVGFKPNNFTFAFVLKACL 253
            ARKVFD +F+            C      +EAL+ F ++R  G   N  T A VLK+  
Sbjct: 356 DARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTA 415

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSF 313
            L+     +  H  A+K  +  D +V   L+D Y K   +S+A R+FEE    D+I  + 
Sbjct: 416 SLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTS 475

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
           MI   +Q D    A++LF  M +  + P+ F   S+L ACA++   + G Q+H+ +++  
Sbjct: 476 MITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQ 535

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
            +SD F  NAL+  YAKCG +E++   F+  P+R  V+W+ MI G  Q G   +A+ +F 
Sbjct: 536 FMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFG 595

Query: 434 KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAK 491
           +M++E +    +T +SVL AC + A L    + +  ++K  + +D    +   +ID+  +
Sbjct: 596 RMVDEGINPNHITMTSVLCAC-NHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGR 654

Query: 492 CGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
            G + DA  LV  M    N   W A++    +H
Sbjct: 655 AGKLDDAMELVNSMPFQANASIWGALLGASRVH 687



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 141/296 (47%), Gaps = 14/296 (4%)

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           MR A     Q T  +  QA      L  G  +H+ +++ G L+     N L+  Y+KC R
Sbjct: 1   MRSAGTISQQLTRYAAAQA------LLPGAHLHASLLKSGSLASF--RNHLISFYSKCRR 52

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
              +   F E P   HV+W++++  Y   G    A+  F  M  E V   E     VL+ 
Sbjct: 53  PCCARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK- 111

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN-DWNEVS 512
           C   A L  G QVH + +   +  DV VANAL+ MY   G + DAR VF+  + + N VS
Sbjct: 112 CVPDARL--GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVS 169

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
           WN ++S Y  +    + ++VF  M   G +P    F  V++AC+    +E G     +MV
Sbjct: 170 WNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQ-VHAMV 228

Query: 573 ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
              G +  +    ++V +  + G +D A+ + E +P    V+ W AL+  C+++ +
Sbjct: 229 VRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMP-DSDVVSWNALISGCVLNGH 283


>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
 gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
          Length = 877

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 279/763 (36%), Positives = 413/763 (54%), Gaps = 28/763 (3%)

Query: 71  DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM-PERNTISFVTTI 129
           D +    +H   +  G   D+F  N L+ +Y     + DA ++F+E   ERN +S+   +
Sbjct: 115 DARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLM 174

Query: 130 QGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHD 189
             Y  + Q  +A+ +F  +   G +   F F+  +         E    V A V ++G+D
Sbjct: 175 SAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYD 234

Query: 190 SNAFVGTALIDAFSVCGCVEFARKVFD-----------GLFNDCF-----EEALNFFSQM 233
            + F   AL+D +   G V+ A  +F+            L + C        A+    QM
Sbjct: 235 KDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM 294

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
           +  G  PN FT + +LKAC G     + +  HG  +K   + D Y+ V L+D+Y K+  +
Sbjct: 295 KYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFL 354

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
            +AR++F+ M  +D+I  + +I+  +      +A+ LF  +R+  +  N+ T  +VL++ 
Sbjct: 355 DDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKST 414

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
           A++E      Q+H+L V++G + D  V N L+D Y KC  + ++  +F E    + +   
Sbjct: 415 ASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACT 474

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
           +MI    Q      A+ +F +ML + +       SS+L ACASL+A E G QVH   +K 
Sbjct: 475 SMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 534

Query: 474 NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVF 533
            +  D    NAL+  YAKCGSI DA L F  + +   VSW+AMI G + HG     L++F
Sbjct: 535 QFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELF 594

Query: 534 DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGR 593
             M   G  PN++T   VL AC++ GL+++ + YF SM   +GI+   EHY+ M+ LLGR
Sbjct: 595 GRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGR 654

Query: 594 AGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLL 653
           AG LD A +L+  +PFQ +  IW ALLGA  +H + E+G+L+A+ +   EPE   THVLL
Sbjct: 655 AGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLL 714

Query: 654 SNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGML 702
           +N YA A  W + A            KEP +SWIE +  VH F  GD SH     I   L
Sbjct: 715 ANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKL 774

Query: 703 EWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNL 762
             L     KAG++P++   L D+   EKE  L  HSE+LA+AFAL   PP +PIR+ KNL
Sbjct: 775 VELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNL 834

Query: 763 RICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           RIC DCH A K ISKIV REIIIRD++RFHHF+DG CSCGD+W
Sbjct: 835 RICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 159/568 (27%), Positives = 273/568 (48%), Gaps = 24/568 (4%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           +H  +LK G+       N L++ Y K  R   A ++FDE+P+   +S+ + +  Y+ +  
Sbjct: 26  LHASLLKSGSLASF--RNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGL 83

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
              A+  F  +  EG   N FA    LK +     A L   V A     G  S+ FV  A
Sbjct: 84  PRSAIQAFHGMRAEGVCCNEFALPVVLKCVPD---ARLGAQVHAMAMATGFGSDVFVANA 140

Query: 198 LIDAFSVCGCVEFARKVF------------DGLF-----NDCFEEALNFFSQMRAVGFKP 240
           L+  +   G ++ AR+VF            +GL      ND   +A+  F +M   G +P
Sbjct: 141 LVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQP 200

Query: 241 NNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIF 300
             F F+ V+ AC G   I   +  H   ++  Y+ D++ A AL+D+Y K G +  A  IF
Sbjct: 201 TEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIF 260

Query: 301 EEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLD 360
           E+MP  DV+ W+ +I+          A+EL  +M+ + + PN FT  S+L+AC+     D
Sbjct: 261 EKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFD 320

Query: 361 LGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYV 420
           LG QIH  +++    SD ++   L+D+YAK   ++++ ++F     R+ +  N +I G  
Sbjct: 321 LGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCS 380

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV 480
             G   +A+ +F ++ +E +     T ++VL++ ASL A     QVH L VK  +  D  
Sbjct: 381 HGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAH 440

Query: 481 VANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG 540
           V N LID Y KC  ++DA  VF+  +  + ++  +MI+  S        +K+F  M ++G
Sbjct: 441 VVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKG 500

Query: 541 WRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKA 600
             P+      +L+AC++    EQG+     ++    +        ++V    + G ++ A
Sbjct: 501 LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAG-NALVYTYAKCGSIEDA 559

Query: 601 AKLIEGIPFQPSVMIWRALLGACIIHNN 628
                 +P +  V+ W A++G    H +
Sbjct: 560 ELAFSSLP-ERGVVSWSAMIGGLAQHGH 586



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 141/513 (27%), Positives = 256/513 (49%), Gaps = 22/513 (4%)

Query: 32  AALSTQQCSNSTTT--PITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCL 89
           A +   QC ++      + +S  +     ++  + +C  + +++    +H  V++ G   
Sbjct: 176 AYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDK 235

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D+F  N L+++Y+K+ R+  A+ +F++MP+ + +S+   I G  ++     A+ L   + 
Sbjct: 236 DVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMK 295

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
             G   N F  ++ LK     G  +L   +   + K   DS+ ++G  L+D ++    ++
Sbjct: 296 YSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLD 355

Query: 210 FARKVFDGLFN-----------DC-----FEEALNFFSQMRAVGFKPNNFTFAFVLKACL 253
            ARKVFD +F+            C      +EAL+ F ++R  G   N  T A VLK+  
Sbjct: 356 DARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTA 415

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSF 313
            L+     +  H  A+K  +  D +V   L+D Y K   +S+A R+FEE    D+I  + 
Sbjct: 416 SLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTS 475

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
           MI   +Q D    A++LF  M +  + P+ F   S+L ACA++   + G Q+H+ +++  
Sbjct: 476 MITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQ 535

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
            +SD F  NAL+  YAKCG +E++   F+  P+R  V+W+ MI G  Q G   +A+ +F 
Sbjct: 536 FMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFG 595

Query: 434 KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAK 491
           +M++E +    +T +SVL AC + A L    + +  ++K  + +D    +   +ID+  +
Sbjct: 596 RMVDEGINPNHITMTSVLCAC-NHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGR 654

Query: 492 CGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
            G + DA  LV  M    N   W A++    +H
Sbjct: 655 AGKLDDAMELVNSMPFQANASIWGALLGASRVH 687



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 142/296 (47%), Gaps = 14/296 (4%)

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           MR A     Q T  +  QA      L  G  +H+ +++ G L+     N L+  Y+KC R
Sbjct: 1   MRSAGTISQQLTRYAAAQA------LLPGAHLHASLLKSGSLASF--RNHLISFYSKCRR 52

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
              +  +F E P   HV+W++++  Y   G    A+  F  M  E V   E     VL+ 
Sbjct: 53  PCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK- 111

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN-DWNEVS 512
           C   A L  G QVH + +   +  DV VANAL+ MY   G + DAR VF+  + + N VS
Sbjct: 112 CVPDARL--GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVS 169

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
           WN ++S Y  +    + ++VF  M   G +P    F  V++AC+    +E G     +MV
Sbjct: 170 WNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQ-VHAMV 228

Query: 573 ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
              G +  +    ++V +  + G +D A+ + E +P    V+ W AL+  C+++ +
Sbjct: 229 VRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMP-DSDVVSWNALISGCVLNGH 283


>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 877

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 274/763 (35%), Positives = 412/763 (53%), Gaps = 28/763 (3%)

Query: 71  DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM-PERNTISFVTTI 129
           D Q    +H   +  G   D+F  N L+ +Y     + DA ++FDE   ERN +S+   +
Sbjct: 115 DAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLM 174

Query: 130 QGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHD 189
             Y  + Q  +A+ +F  +   G +   F F+  +         +    V A V ++G++
Sbjct: 175 SAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYE 234

Query: 190 SNAFVGTALIDAFSVCGCVEFARKVFD-----------GLFNDCF-----EEALNFFSQM 233
            + F   AL+D +   G V+ A  +F+            L + C        A+    QM
Sbjct: 235 KDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM 294

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
           ++ G  PN F  + +LKAC G     + +  HG  +K   + D Y+ V L+D+Y K+  +
Sbjct: 295 KSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFL 354

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
            +A ++F+ M  +D+I W+ +I+  +      +A  +F  +R+  +  N+ T  +VL++ 
Sbjct: 355 DDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKST 414

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
           A++E      Q+H+L  ++G + D  V N L+D Y KC  + +++ +F E    + +   
Sbjct: 415 ASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVT 474

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
           +MI    Q      A+ +F +ML + +       SS+L ACASL+A E G QVH   +K 
Sbjct: 475 SMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 534

Query: 474 NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVF 533
            +  D    NAL+  YAKCGSI DA L F  + +   VSW+AMI G + HG     L++F
Sbjct: 535 QFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELF 594

Query: 534 DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGR 593
             M   G  PN++T   VL AC++ GL+++ + YF SM   +GI+   EHY+ M+ LLGR
Sbjct: 595 GRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGR 654

Query: 594 AGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLL 653
           AG LD A +L+  +PFQ +  +W ALLGA  +H + E+G+L+A+ +   EPE   THVLL
Sbjct: 655 AGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLL 714

Query: 654 SNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGML 702
           +N YA +  W + A            KEP +SW+E +  VH F  GD SH     I   L
Sbjct: 715 ANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKL 774

Query: 703 EWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNL 762
           + L     KAGYIP++   L D+   EKE  L  HSE+LA+AFAL   PP +PIR+ KNL
Sbjct: 775 DELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNL 834

Query: 763 RICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           RIC DCH A K IS IV REIIIRD++RFHHF+DG CSCGD+W
Sbjct: 835 RICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  246 bits (627), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 162/568 (28%), Positives = 272/568 (47%), Gaps = 24/568 (4%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           +H  +LK G    L   N L++ Y K  R   A ++FDE+P+   +S+ + +  Y+ +  
Sbjct: 26  LHANLLKSGFLASL--RNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGL 83

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
              A+  F  +  EG   N FA    LK +     A+L   V A     G  S+ FV  A
Sbjct: 84  PRSAIQAFHGMRAEGVCCNEFALPVVLKCVPD---AQLGAQVHAMAMATGFGSDVFVANA 140

Query: 198 LIDAFSVCGCVEFARKVFD------------GLF-----NDCFEEALNFFSQMRAVGFKP 240
           L+  +   G ++ AR+VFD            GL      ND   +A+  F +M   G +P
Sbjct: 141 LVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQP 200

Query: 241 NNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIF 300
             F F+ V+ AC G   I   +  H   ++  YE D++ A AL+D+Y K G +  A  IF
Sbjct: 201 TEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIF 260

Query: 301 EEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLD 360
           E+MP  DV+ W+ +I+          A+EL  +M+ + + PN F   S+L+ACA     D
Sbjct: 261 EKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFD 320

Query: 361 LGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYV 420
           LG QIH  +++    SD ++   L+D+YAK   +++++++F     R+ + WN +I G  
Sbjct: 321 LGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCS 380

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV 480
             G   +A  +F  + +E +     T ++VL++ ASL A     QVH L  K  +  D  
Sbjct: 381 HGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAH 440

Query: 481 VANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG 540
           V N LID Y KC  ++DA  VF+  +  + ++  +MI+  S        +K+F  M ++G
Sbjct: 441 VVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKG 500

Query: 541 WRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKA 600
             P+      +L+AC++    EQG+     ++    +        ++V    + G ++ A
Sbjct: 501 LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAG-NALVYTYAKCGSIEDA 559

Query: 601 AKLIEGIPFQPSVMIWRALLGACIIHNN 628
                 +P +  V+ W A++G    H +
Sbjct: 560 ELAFSSLP-ERGVVSWSAMIGGLAQHGH 586



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 140/513 (27%), Positives = 250/513 (48%), Gaps = 22/513 (4%)

Query: 32  AALSTQQCSNSTTT--PITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCL 89
           A +   QC ++      + +S  +     ++  + +C  + ++     +H  V++ G   
Sbjct: 176 AYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEK 235

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D+F  N L+++YVK+ R+  A+ +F++MP+ + +S+   I G  ++     A+ L   + 
Sbjct: 236 DVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMK 295

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
             G   N F  ++ LK     G  +L   +   + K   DS+ ++G  L+D ++    ++
Sbjct: 296 SSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLD 355

Query: 210 FARKVFD-----------GLFNDC-----FEEALNFFSQMRAVGFKPNNFTFAFVLKACL 253
            A KVFD            L + C      +EA + F  +R  G   N  T A VLK+  
Sbjct: 356 DAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTA 415

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSF 313
            L+     +  H  A K  +  D +V   L+D Y K   +S+A R+FEE    D+I  + 
Sbjct: 416 SLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTS 475

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
           MI   +Q D    A++LF  M +  + P+ F   S+L ACA++   + G Q+H+ +++  
Sbjct: 476 MITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQ 535

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
            +SD F  NAL+  YAKCG +E++   F+  P+R  V+W+ MI G  Q G   +A+ +F 
Sbjct: 536 FMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFG 595

Query: 434 KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAK 491
           +M++E +    +T +SVL AC + A L    + +  ++K  + +D    +   +ID+  +
Sbjct: 596 RMVDEGINPNHITMTSVLCAC-NHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGR 654

Query: 492 CGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
            G + DA  LV  M    N   W A++    +H
Sbjct: 655 AGKLDDAMELVNSMPFQANASVWGALLGASRVH 687



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 143/296 (48%), Gaps = 14/296 (4%)

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           MR A     Q T  +  QA      L  G  +H+ +++ G L+ +   N L+  Y+KC R
Sbjct: 1   MRSAGTISQQLTRYAAAQA------LLPGAHLHANLLKSGFLASL--RNHLISFYSKCRR 52

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
              +  +F E P   HV+W++++  Y   G    A+  F  M  E V   E     VL+ 
Sbjct: 53  PCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK- 111

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMM-NDWNEVS 512
           C   A L  G QVH + +   +  DV VANAL+ MY   G + DAR VFD   ++ N VS
Sbjct: 112 CVPDAQL--GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVS 169

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
           WN ++S Y  +    + ++VF  M   G +P    F  V++AC+    ++ G     +MV
Sbjct: 170 WNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGR-QVHAMV 228

Query: 573 ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
              G E  +    ++V +  + G +D A+ + E +P    V+ W AL+  C+++ +
Sbjct: 229 VRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMP-DSDVVSWNALISGCVLNGH 283


>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
          Length = 784

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 274/763 (35%), Positives = 412/763 (53%), Gaps = 28/763 (3%)

Query: 71  DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM-PERNTISFVTTI 129
           D Q    +H   +  G   D+F  N L+ +Y     + DA ++FDE   ERN +S+   +
Sbjct: 22  DAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLM 81

Query: 130 QGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHD 189
             Y  + Q  +A+ +F  +   G +   F F+  +         +    V A V ++G++
Sbjct: 82  SAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYE 141

Query: 190 SNAFVGTALIDAFSVCGCVEFARKVFD-----------GLFNDCF-----EEALNFFSQM 233
            + F   AL+D +   G V+ A  +F+            L + C        A+    QM
Sbjct: 142 KDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM 201

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
           ++ G  PN F  + +LKAC G     + +  HG  +K   + D Y+ V L+D+Y K+  +
Sbjct: 202 KSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFL 261

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
            +A ++F+ M  +D+I W+ +I+  +      +A  +F  +R+  +  N+ T  +VL++ 
Sbjct: 262 DDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKST 321

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
           A++E      Q+H+L  ++G + D  V N L+D Y KC  + +++ +F E    + +   
Sbjct: 322 ASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVT 381

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
           +MI    Q      A+ +F +ML + +       SS+L ACASL+A E G QVH   +K 
Sbjct: 382 SMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 441

Query: 474 NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVF 533
            +  D    NAL+  YAKCGSI DA L F  + +   VSW+AMI G + HG     L++F
Sbjct: 442 QFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELF 501

Query: 534 DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGR 593
             M   G  PN++T   VL AC++ GL+++ + YF SM   +GI+   EHY+ M+ LLGR
Sbjct: 502 GRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGR 561

Query: 594 AGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLL 653
           AG LD A +L+  +PFQ +  +W ALLGA  +H + E+G+L+A+ +   EPE   THVLL
Sbjct: 562 AGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLL 621

Query: 654 SNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGML 702
           +N YA +  W + A            KEP +SW+E +  VH F  GD SH     I   L
Sbjct: 622 ANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKL 681

Query: 703 EWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNL 762
           + L     KAGYIP++   L D+   EKE  L  HSE+LA+AFAL   PP +PIR+ KNL
Sbjct: 682 DELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNL 741

Query: 763 RICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           RIC DCH A K IS IV REIIIRD++RFHHF+DG CSCGD+W
Sbjct: 742 RICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 784



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 140/513 (27%), Positives = 250/513 (48%), Gaps = 22/513 (4%)

Query: 32  AALSTQQCSNSTTT--PITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCL 89
           A +   QC ++      + +S  +     ++  + +C  + ++     +H  V++ G   
Sbjct: 83  AYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEK 142

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D+F  N L+++YVK+ R+  A+ +F++MP+ + +S+   I G  ++     A+ L   + 
Sbjct: 143 DVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMK 202

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
             G   N F  ++ LK     G  +L   +   + K   DS+ ++G  L+D ++    ++
Sbjct: 203 SSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLD 262

Query: 210 FARKVFD-----------GLFNDC-----FEEALNFFSQMRAVGFKPNNFTFAFVLKACL 253
            A KVFD            L + C      +EA + F  +R  G   N  T A VLK+  
Sbjct: 263 DAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTA 322

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSF 313
            L+     +  H  A K  +  D +V   L+D Y K   +S+A R+FEE    D+I  + 
Sbjct: 323 SLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTS 382

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
           MI   +Q D    A++LF  M +  + P+ F   S+L ACA++   + G Q+H+ +++  
Sbjct: 383 MITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQ 442

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
            +SD F  NAL+  YAKCG +E++   F+  P+R  V+W+ MI G  Q G   +A+ +F 
Sbjct: 443 FMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFG 502

Query: 434 KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAK 491
           +M++E +    +T +SVL AC + A L    + +  ++K  + +D    +   +ID+  +
Sbjct: 503 RMVDEGINPNHITMTSVLCAC-NHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGR 561

Query: 492 CGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
            G + DA  LV  M    N   W A++    +H
Sbjct: 562 AGKLDDAMELVNSMPFQANASVWGALLGASRVH 594


>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 891

 Score =  514 bits (1323), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 288/761 (37%), Positives = 426/761 (55%), Gaps = 34/761 (4%)

Query: 75  AMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTV 134
           A  +H  ++  G    +F +  L+N+Y  L  +  +   FD++P+++  ++ + I  Y  
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 194

Query: 135 SSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFV 194
           +  F EA+G F  L     E+ P  F  F  VL + G       +    +KLG   N FV
Sbjct: 195 NGHFHEAIGCFYQLLLVS-EIRP-DFYTFPPVLKACGTLVDGRKIHCWAFKLGFQWNVFV 252

Query: 195 GTALIDAFSVCGCVEFARKVFD---------------GLF-NDCFEEALNFFSQMRAVGF 238
             +LI  +S  G    AR +FD               GL  N    +AL+   +MR  G 
Sbjct: 253 AASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGI 312

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
           K N  T   +L  C  L  I  A   H   +K   E DL+V+ AL+++Y K G + +AR+
Sbjct: 313 KMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARK 372

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
            F++M   DV+ W+ +IA Y Q D  + A   F +M+     P+  T VS+    A    
Sbjct: 373 AFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRD 432

Query: 359 LDLGNQIHSLVVRVG-LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIV 417
                 +H  ++R G L+ DV + NA++D+YAK G ++++ ++F   P ++ ++WNT+I 
Sbjct: 433 CKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLIT 492

Query: 418 GYVQLGEVGKAMIMFSKMLEE--QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY 475
           GY Q G   +A+ ++ KM+EE  ++   + T+ S+L A A + AL+ GM++H   +K N 
Sbjct: 493 GYAQNGLASEAIEVY-KMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNL 551

Query: 476 DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDL 535
            +DV VA  LID+Y KCG + DA  +F  +   + V+WNA+IS + +HG + + LK+F  
Sbjct: 552 HLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGE 611

Query: 536 MQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAG 595
           M   G +P+++TFV +LSACS+ G +E+G+  F+ M   YGI+P ++HY  MV LLGRAG
Sbjct: 612 MLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM-QEYGIKPSLKHYGCMVDLLGRAG 670

Query: 596 HLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSN 655
           +L+ A   I+ +P QP   IW ALLGAC IH N+E+G+ ++  + + + ++   +VLLSN
Sbjct: 671 YLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSN 730

Query: 656 IYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEW 704
           IYA    WE           +   K PG S IE    V  F  G+ SH     I   L  
Sbjct: 731 IYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRV 790

Query: 705 LNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRI 764
           L  K +  GYIPD S VL+DV EDEKE  L  HSE+LA+AF +   PP SPIRI KNLR+
Sbjct: 791 LTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRV 850

Query: 765 CVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           C DCH A K IS+I QREI++RD +RFHHF+DG CSCGD+W
Sbjct: 851 CGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/386 (24%), Positives = 174/386 (45%), Gaps = 24/386 (6%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L  C Q  D+ TAM IH  V+K G   DLF +N L+N+Y K   L DA K F +M   + 
Sbjct: 323 LPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDV 382

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +S+ + I  Y  +   V A G F  +   G + +     +   ++      +    V   
Sbjct: 383 VSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGF 442

Query: 183 VYKLGH-DSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEE 225
           + + G    +  +G A++D ++  G ++ A KVF+ +                 N    E
Sbjct: 443 IMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASE 502

Query: 226 ALNFFSQMRAVG-FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           A+  +  M       PN  T+  +L A   +  ++     HG  +KT   +D++VA  L+
Sbjct: 503 AIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLI 562

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
           D+Y K G + +A  +F ++P++  + W+ +I+ +     +   ++LF  M    V P+  
Sbjct: 563 DVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHV 622

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           TFVS+L AC+    ++ G     L+   G+   +     ++D+  + G +E + +   + 
Sbjct: 623 TFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDM 682

Query: 405 PKRNHVT-WNTM-----IVGYVQLGE 424
           P +   + W  +     I G ++LG+
Sbjct: 683 PLQPDASIWGALLGACRIHGNIELGK 708


>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 973

 Score =  514 bits (1323), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 269/724 (37%), Positives = 406/724 (56%), Gaps = 28/724 (3%)

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           ATKLF    + +   +  T+  Y  + +  EAV  F  + +     +   +   L V+ S
Sbjct: 250 ATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVAS 309

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF-------------- 215
           +   EL   +   V + G D    V  + I+ +   G V +AR++F              
Sbjct: 310 LNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTV 369

Query: 216 -DGLFNDCFEE-ALNFFSQMRAVGFKPNNFTFAFVLKACLGLD-TIRVAKSAHGCALKTC 272
             G      EE +L  F  +   G  P+ FT   VL+AC  L+ +  V +  H CALK  
Sbjct: 370 ISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAG 429

Query: 273 YEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFC 332
             +D +V+ AL+D+Y+K G++  A  +F      D+  W+ M+  +  +D   +A+ LF 
Sbjct: 430 IVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFS 489

Query: 333 RMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCG 392
            M +     +Q TF +  +A   +  L  G QIH++V+++    D+FV + ++D+Y KCG
Sbjct: 490 LMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCG 549

Query: 393 RMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLR 452
            M+++ ++F + P  + V W T+I G V+ GE  +A+  + +M    V   E T++++++
Sbjct: 550 EMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVK 609

Query: 453 ACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS 512
           AC+ L ALE G Q+H   +K N   D  V  +L+DMYAKCG+I DA  +F  MN  +   
Sbjct: 610 ACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVAL 669

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
           WNAMI G + HG + E L  F+ M+ RG  P+ +TF+GVLSACS+ GL       F SM 
Sbjct: 670 WNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQ 729

Query: 573 ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIG 632
             YG+EP IEHY+ +V  L RAGH+ +A K++  +PF+ S  ++R LL AC +  + E G
Sbjct: 730 KTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETG 789

Query: 633 RLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGM 681
              A+ +   +P D A +VLLSNIYA A  WE A S           KEPG SWI+ +  
Sbjct: 790 ERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNK 849

Query: 682 VHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKL 741
           VH F AGD SH + ++I   +E++  + ++ GY+PD    L D+ E++KE  L  HSEKL
Sbjct: 850 VHLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYVPDTEFALVDIEEEDKESALSYHSEKL 909

Query: 742 ALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSC 801
           A+A+ L K PPS+ +R+IKNLR+C DCH AIK IS + QREI++RD +RFHHF+ G CSC
Sbjct: 910 AIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISNVFQREIVLRDANRFHHFRSGICSC 969

Query: 802 GDFW 805
           GD+W
Sbjct: 970 GDYW 973



 Score =  202 bits (513), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 152/526 (28%), Positives = 249/526 (47%), Gaps = 29/526 (5%)

Query: 2   IRLFNYKTFSCKQLTHQSKINAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYAT 61
           +R +  K F C      S +  W + LS+         +      +  S    +S +Y  
Sbjct: 246 VRAYATKLFVCDD---DSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIV 302

Query: 62  SLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERN 121
            L      + L+    IH  V++ G    +   N  +N+YVK   +  A ++F +M E +
Sbjct: 303 ILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVD 362

Query: 122 TISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC--- 178
            IS+ T I G   S     ++ LF  L R G   + F  T+ L+   S+   E   C   
Sbjct: 363 LISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSL---EESYCVGR 419

Query: 179 -VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF---DGL-------------FND 221
            V  C  K G   ++FV TALID +S  G +E A  +F   DG               +D
Sbjct: 420 QVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSD 479

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
            + EAL  FS M   G K +  TFA   KA   L  ++  K  H   +K  +  DL+V  
Sbjct: 480 NYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVIS 539

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
            +LD+Y K GE+ +AR++F ++P  D + W+ +I+   +      A+  + +MR A V P
Sbjct: 540 GILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQP 599

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           +++TF ++++AC+ +  L+ G QIH+ ++++    D FV  +L+D+YAKCG +E++  LF
Sbjct: 600 DEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLF 659

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
                R+   WN MIVG  Q G   +A+  F++M    V    VT+  VL AC S + L 
Sbjct: 660 RRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSAC-SHSGLT 718

Query: 462 PGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDARLVFDMM 505
                +  +++  Y ++  + +   L+D  ++ G I +A  V   M
Sbjct: 719 SDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSM 764



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 155/616 (25%), Positives = 276/616 (44%), Gaps = 67/616 (10%)

Query: 36  TQQCSNSTTT--PITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFA 93
           +++CS S ++  P  FS+           L+  I + DL      H  ++  G   D + 
Sbjct: 2   SRKCSVSPSSLLPQWFSI-----------LRHAIADSDLILGKRTHAVIVTSGLNPDRYV 50

Query: 94  TNVLLNVYVKLNRLPDATKLFDEMPE--RNTISFVTTIQGYTVSSQF------VEAVGLF 145
           TN L+ +Y K   L  A KLFD  P+  R+ +++   +  Y  + +        EA  +F
Sbjct: 51  TNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIF 110

Query: 146 STLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVC 205
             L +          +   K+ +  G       +     K+G   + FV  AL++ ++  
Sbjct: 111 RLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKF 170

Query: 206 GCVEFARKVFDG-------LFN---------DCFEEALNFFSQMRAVGFKPNNFTFAFVL 249
             +  AR +FD        L+N            +E L  FS     G +P+        
Sbjct: 171 QRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPD-------- 222

Query: 250 KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
             C+ + TI +     G   KT +E +L    A             A ++F      DV 
Sbjct: 223 --CVSVRTILM-----GVGKKTVFERELEQVRAY------------ATKLFVCDDDSDVT 263

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
            W+  ++ Y Q     +AV+ F  M ++ V  +  T++ +L   A++  L+LG QIH  V
Sbjct: 264 VWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAV 323

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAM 429
           VR G    V V+N+ +++Y K G +  +  +F +  + + ++WNT+I G  + G    ++
Sbjct: 324 VRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSL 383

Query: 430 IMFSKMLEEQVPATEVTYSSVLRACASL-AALEPGMQVHCLTVKANYDMDVVVANALIDM 488
            +F  +L   +   + T +SVLRAC+SL  +   G QVH   +KA   +D  V+ ALID+
Sbjct: 384 RLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDV 443

Query: 489 YAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTF 548
           Y+K G + +A L+F   + ++  SWNAM+ G+++     E L++F LM +RG + + +TF
Sbjct: 444 YSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITF 503

Query: 549 VGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIP 608
                A      L+QG+    ++V        +   + ++ +  + G +  A K+   IP
Sbjct: 504 ANAAKAAGCLVRLQQGKQ-IHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIP 562

Query: 609 FQPSVMIWRALLGACI 624
             P  + W  ++  C+
Sbjct: 563 -SPDDVAWTTVISGCV 577



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 166/346 (47%), Gaps = 19/346 (5%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           +H   LK G  LD F +  L++VY K  ++ +A  LF      +  S+   + G+TVS  
Sbjct: 421 VHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDN 480

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
           + EA+ LFS +H  G + +   F    K    +   +    + A V K+    + FV + 
Sbjct: 481 YREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISG 540

Query: 198 LIDAFSVCGCVEFARKVFDGL-----------FNDCF-----EEALNFFSQMRAVGFKPN 241
           ++D +  CG ++ ARKVF+ +            + C      E+AL  + QMR  G +P+
Sbjct: 541 ILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPD 600

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
            +TFA ++KAC  L  +   K  H   +K     D +V  +L+D+Y K G I +A  +F 
Sbjct: 601 EYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFR 660

Query: 302 EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL-- 359
            M  + V  W+ MI   AQ   + +A+  F  M+   V P++ TF+ VL AC +  GL  
Sbjct: 661 RMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSAC-SHSGLTS 719

Query: 360 DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           D      S+    G+  ++   + L+D  ++ G ++ + ++ +  P
Sbjct: 720 DAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMP 765



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 115/250 (46%), Gaps = 17/250 (6%)

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
           LQ    IH  V+K     DLF  + +L++Y+K   +  A K+F+++P  + +++ T I G
Sbjct: 516 LQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISG 575

Query: 132 YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSN 191
              + +  +A+  +  +   G + + + F   +K    +   E    + A + KL    +
Sbjct: 576 CVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFD 635

Query: 192 AFVGTALIDAFSVCGCVEFARKVFD-------GLFNDCF---------EEALNFFSQMRA 235
            FV T+L+D ++ CG +E A  +F         L+N            EEALNFF++M++
Sbjct: 636 PFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKS 695

Query: 236 VGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT-CYEMDLYVAVALLDLYTKSGEIS 294
            G  P+  TF  VL AC        A        KT   E ++     L+D  +++G I 
Sbjct: 696 RGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQ 755

Query: 295 NARRIFEEMP 304
            A ++   MP
Sbjct: 756 EAEKVVSSMP 765


>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 269/752 (35%), Positives = 413/752 (54%), Gaps = 28/752 (3%)

Query: 81  QVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVE 140
           +V+K G C D    + L+NVYVK   L  A ++ +EMP ++   +   +          E
Sbjct: 14  RVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQE 73

Query: 141 AVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALID 200
           AV LF  +      LN F F + +    S+G       + ACV K G +S+  +  A + 
Sbjct: 74  AVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVT 133

Query: 201 AFSVCGCVEFARKVFDGLFNDCFEEALNFFS----------------QMRAVGFKPNNFT 244
            +     VE   + F  +  +      N  S                Q+   GF+PN +T
Sbjct: 134 MYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYT 193

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
           F  +LK C     +   K+ HG  +K+    D ++  +L+++Y K G  + A ++F E+P
Sbjct: 194 FISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 253

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
           ++DV+ W+ +I  +         + +F +M      PN +TF+S+L++C+++  +DLG Q
Sbjct: 254 ERDVVSWTALITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQ 312

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
           +H+ +V+  L  + FV  AL+D+YAK   +E++  +F    KR+   W  ++ GY Q G+
Sbjct: 313 VHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQ 372

Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA 484
             KA+  F +M  E V   E T +S L  C+ +A L+ G Q+H + +KA    D+ VA+A
Sbjct: 373 GEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASA 432

Query: 485 LIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPN 544
           L+DMYAKCG + DA +VFD +   + VSWN +I GYS HG   + LK F+ M   G  P+
Sbjct: 433 LVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPD 492

Query: 545 NLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLI 604
            +TF+GVLSACS+ GL+E+G+ +F S+   YGI P IEHY  MV +LGRAG   +    I
Sbjct: 493 EVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFI 552

Query: 605 EGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE 664
           E +    +V+IW  +LGAC +H N+E G  +A  + + EPE ++ ++LLSN++A    W+
Sbjct: 553 EEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWD 612

Query: 665 -----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAG 713
                      +   KEPG SW+E  G VH F + D SH  +  I   L+ L+ K    G
Sbjct: 613 DVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVG 672

Query: 714 YIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIK 773
           Y P+   VL +V + EK+  L+ HSE+LALAFAL        IRI KNLRIC DCH  +K
Sbjct: 673 YTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMK 732

Query: 774 IISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            IS+I  +E+++RD++ FHHF++G CSC +FW
Sbjct: 733 SISEITNQELVVRDINCFHHFKNGSCSCQNFW 764



 Score =  232 bits (591), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 139/489 (28%), Positives = 240/489 (49%), Gaps = 19/489 (3%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
            N   +A+ + +     D     +IH  V K G   D+  +N  + +Y+K   + +  + 
Sbjct: 88  LNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQF 147

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           F  M   N  S    + G+  +    +   +   L  EG E N + F + LK   S G  
Sbjct: 148 FKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDL 207

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GL 218
                +   V K G + ++ +  +L++ ++ CG   +A KVF                G 
Sbjct: 208 NEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGF 267

Query: 219 FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
             + +   L  F+QM A GF PN +TF  +L++C  L  + + K  H   +K   + + +
Sbjct: 268 VAEGYGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDF 327

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V  AL+D+Y K+  + +A  IF  + K+D+  W+ ++A YAQ      AV+ F +M++  
Sbjct: 328 VGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREG 387

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           V PN+FT  S L  C+ +  LD G Q+HS+ ++ G   D+FV++AL+D+YAKCG +E++ 
Sbjct: 388 VKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAE 447

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            +F     R+ V+WNT+I GY Q G+ GKA+  F  ML+E     EVT+  VL AC+ + 
Sbjct: 448 VVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMG 507

Query: 459 ALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDAR-LVFDMMNDWNEVSWNA 515
            +E G + H  ++   Y +   + +   ++D+  + G   +    + +M    N + W  
Sbjct: 508 LIEEGKK-HFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWET 566

Query: 516 MISGYSMHG 524
           ++    MHG
Sbjct: 567 VLGACKMHG 575



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 129/444 (29%), Positives = 213/444 (47%), Gaps = 31/444 (6%)

Query: 36  TQQCSNSTTTPITFSVSEF--NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFA 93
           T+ C       I   V  F  N +++ + L++C    DL     IH QV+K G   D   
Sbjct: 169 TETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHL 228

Query: 94  TNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGH 153
            N L+NVY K      A K+F E+PER+ +S+   I G+ V+  +   + +F+ +  EG 
Sbjct: 229 WNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGF-VAEGYGSGLRIFNQMLAEGF 287

Query: 154 ELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARK 213
             N + F + L+   S+   +L   V A + K   D N FVGTAL+D ++    +E A  
Sbjct: 288 NPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAET 347

Query: 214 VFDGLFN-DCF---------------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDT 257
           +F+ L   D F               E+A+  F QM+  G KPN FT A  L  C  + T
Sbjct: 348 IFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIAT 407

Query: 258 IRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIAR 317
           +   +  H  A+K     D++VA AL+D+Y K G + +A  +F+ +  +D + W+ +I  
Sbjct: 408 LDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICG 467

Query: 318 YAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ-IHSLVVRVGLLS 376
           Y+Q      A++ F  M      P++ TF+ VL AC+ M  ++ G +  +SL    G+  
Sbjct: 468 YSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITP 527

Query: 377 DVFVSNALMDVYAKCGRMENSVELFAESPK--RNHVTWNTMIV-----GYVQLGEVGKAM 429
            +     ++D+  + G+  + VE F E  K   N + W T++      G ++ GE   AM
Sbjct: 528 TIEHYACMVDILGRAGKF-HEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERA-AM 585

Query: 430 IMFSKMLEEQVPATEVTYSSVLRA 453
            +F   LE ++ +  +  S++  A
Sbjct: 586 KLFE--LEPEIDSNYILLSNMFAA 607


>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  513 bits (1320), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 290/811 (35%), Positives = 442/811 (54%), Gaps = 78/811 (9%)

Query: 40  SNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLN 99
           S   T+  T   S+ N   Y++ +Q CI ++  Q   +IH Q++  G   D +    +L 
Sbjct: 55  SPKPTSIHTKPASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILM 114

Query: 100 VYVKLNRLPD---ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELN 156
           +Y +   L D   A KLF+EMPERN  ++ T I  Y     ++EA G+F  + + G   +
Sbjct: 115 LYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPD 174

Query: 157 PFAFTAFLKVLVSM----GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFAR 212
            F F + L+V  ++    G  ++   + AC +K     + FVG ALID ++ C   E   
Sbjct: 175 NFTFASALRVCGALRSRDGGKQVHSKLIACGFK----GDTFVGNALIDMYAKCDDEESCL 230

Query: 213 KVFD--------------------GLFNDCFEEALNFFSQMRAV--GFKPNNFTFAFVLK 250
           KVFD                    G FND    AL  F +M+    G +P+ FTF  +L 
Sbjct: 231 KVFDEMGERNQVTWNSIISAEAQFGHFND----ALVLFLRMQESEDGIQPDQFTFTTLLT 286

Query: 251 ACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIP 310
            C         +  H   ++     ++ V   L+ +Y++ G ++ A+ IF  M +++   
Sbjct: 287 LCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYS 346

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV 370
           W+ MI  Y Q   + +A+ LF +M+   + P+ F+  S+L +C ++     G ++H+ +V
Sbjct: 347 WNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIV 406

Query: 371 RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK--RNHVTWNTMIVGYVQLGEVGKA 428
           R  +  +  +   L+D+YAKCG M+ + +++ ++ K  RN   WN+++ GY   G   ++
Sbjct: 407 RNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKES 466

Query: 429 MIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDM 488
              F +MLE  +    +T  +++                           +V+  AL+DM
Sbjct: 467 FNHFLEMLESDIEYDVLTMVTIVNL-------------------------LVLETALVDM 501

Query: 489 YAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTF 548
           Y+KCG+IT AR VFD MN  N VSWNAMISGYS HG S E L +++ M ++G  PN +TF
Sbjct: 502 YSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTF 561

Query: 549 VGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIP 608
           + +LSACS+ GL+E+G   F SM  +Y IE   EHYT MV LLGRAG L+ A + +E +P
Sbjct: 562 LAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMP 621

Query: 609 FQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE---- 664
            +P V  W ALLGAC +H ++++GRL+AQ + + +P++   +V++SNIYA A  W+    
Sbjct: 622 IEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVED 681

Query: 665 -------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPD 717
                  K   K+PG+SWIE    +  F AG  +H     I   L  L ++S+  GYIPD
Sbjct: 682 IRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPD 741

Query: 718 LSAVL---RDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKI 774
            S +L   +D++E+E+E YL  HSE+LAL+  L  +P  S IR+ KNLRIC DCHTA K 
Sbjct: 742 TSFILQNVKDIKEEEEEEYLLQHSERLALSLGLISLPKKSTIRVFKNLRICGDCHTATKF 801

Query: 775 ISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           ISKI  R II RD +RFHHF++G CSCGD+W
Sbjct: 802 ISKITGRRIIARDTNRFHHFENGKCSCGDYW 832


>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
 gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
          Length = 799

 Score =  512 bits (1319), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 289/788 (36%), Positives = 428/788 (54%), Gaps = 49/788 (6%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLD-LFATNV---------LLNVYVKLNRLPDATK 112
           L+SCIQ+  L     IH  +LK   CL     TN+         L+++Y+  + L  A  
Sbjct: 16  LESCIQSKSLFRGKLIHQHLLK---CLHRTHETNLTNFDVPFEKLVDLYIACSELKIARH 72

Query: 113 LFDEMPER--NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSM 170
           +FD+MP R  N + +   I+ Y  +  + EA+ L+  +   G   N F F   LK   ++
Sbjct: 73  VFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSAL 132

Query: 171 GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-------------- 216
             A     +   + +L  +SN +V TAL+D ++ CGC++ A++VFD              
Sbjct: 133 KEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMI 192

Query: 217 ---GLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY 273
               L    ++E      QM+     PN+ T   VL A   ++++R  K  HG  ++  +
Sbjct: 193 SGFSLHEGSYDEVARLLVQMQN-DVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGF 251

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIARYAQTDLSIDAVELFC 332
             D+ V   +LD+Y K   I  ARRIF+ M   K+ + WS M+  Y   D   +A+ELFC
Sbjct: 252 VGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFC 311

Query: 333 RM---RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYA 389
           ++   +   +  +  T  +V++ CA +  L  G  +H   ++ G + D+ V N L+ +YA
Sbjct: 312 QLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYA 371

Query: 390 KCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSS 449
           KCG +  ++  F E   R+ V++  +I GYVQ G   + + MF +M    +   + T +S
Sbjct: 372 KCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLAS 431

Query: 450 VLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWN 509
           VL ACA LA L  G   HC  +   +  D ++ NALIDMYAKCG I  AR VFD M+   
Sbjct: 432 VLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRG 491

Query: 510 EVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFK 569
            VSWN MI  Y +HG+  E L +FD MQ  G +P+++TF+ ++SACS+ GL+ +G+ +F 
Sbjct: 492 IVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFN 551

Query: 570 SMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNV 629
           +M  ++GI P +EHY  MV LL RAG   +    IE +P +P V +W ALL AC ++ NV
Sbjct: 552 AMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNV 611

Query: 630 EIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIEN 678
           E+G   ++ I    PE     VLLSN+Y+    W+ AA            K PG SWIE 
Sbjct: 612 ELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWIEI 671

Query: 679 QGMVHYFRAGD-TSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVH 737
            G+VH F  G   SH  +  I   L+ L ++ ++ GY  + S V +DV E+EKER L  H
Sbjct: 672 SGVVHTFLGGGYRSHPQLTQISNKLDELLVEMKRLGYQAESSYVFQDVEEEEKERVLLYH 731

Query: 738 SEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDG 797
           SEKLA+AF +  + P   I + KNLR+C DCHTAIK IS + +R+I +RD  RFHHF+DG
Sbjct: 732 SEKLAIAFGILSLSPDKHIIVTKNLRVCGDCHTAIKFISLVTKRDITVRDASRFHHFKDG 791

Query: 798 CCSCGDFW 805
            C+CGDFW
Sbjct: 792 ICNCGDFW 799



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 111/429 (25%), Positives = 203/429 (47%), Gaps = 20/429 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  ++   L++C    +      IHC + +     +++ +  L++ Y K   L DA ++F
Sbjct: 118 NRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVF 177

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D+M +R+ +++ + I G+++     + V       +     N       L  +  +    
Sbjct: 178 DKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLR 237

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--GLFN------------ 220
               +     + G   +  VGT ++D +  C C+++AR++FD  G+              
Sbjct: 238 HGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAY 297

Query: 221 ---DCFEEALNFFSQMRAVG---FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
              D   EAL  F Q+  +       +  T A V++ C  L  +      H  A+K+ + 
Sbjct: 298 VVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFV 357

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
           +DL V   LL +Y K G I+ A R F EM  +D + ++ +I+ Y Q   S + + +F  M
Sbjct: 358 LDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEM 417

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
           + + + P + T  SVL ACA + GL  G+  H   +  G  +D  + NAL+D+YAKCG++
Sbjct: 418 QLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKI 477

Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
           + + ++F    KR  V+WNTMI+ Y   G   +A+++F  M  E +   +VT+  ++ AC
Sbjct: 478 DTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISAC 537

Query: 455 ASLAALEPG 463
           +    +  G
Sbjct: 538 SHSGLVAEG 546



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 117/279 (41%), Gaps = 22/279 (7%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           + AT ++ C    DL T   +HC  +K G  LDL   N LL++Y K   +  A + F+EM
Sbjct: 327 TLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEM 386

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
             R+ +SF   I GY  +    E + +F  +   G         + L     +       
Sbjct: 387 DLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGS 446

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FND 221
           C        G  ++  +  ALID ++ CG ++ ARKVFD +                 + 
Sbjct: 447 CSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHG 506

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAK---SAHGCALKTCYEMDLY 278
              EAL  F  M++ G KP++ TF  ++ AC     +   K   +A          M+ Y
Sbjct: 507 IGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHY 566

Query: 279 VAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
               ++DL +++G         E+MP + DV  W  +++
Sbjct: 567 --ACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLS 603


>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 816

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 282/786 (35%), Positives = 431/786 (54%), Gaps = 35/786 (4%)

Query: 49  FSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLP 108
           F  S    H  A  L+ C    +L   + +   ++K G   +      L++++ K N + 
Sbjct: 37  FIPSHVYRHPSAILLELCTSLKELHQILPL---IIKNGFYNEHLFQTKLISLFCKFNSIT 93

Query: 109 DATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNP--FAFTAFLKV 166
           +A ++F+ +  +  + + T ++GY  +S   +AV  +  +  +  E+ P  + FT  L++
Sbjct: 94  EAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCD--EVMPVVYDFTYLLQL 151

Query: 167 LVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------- 216
                       +   V   G  SN F  TA+++ ++ C  +E A K+F+          
Sbjct: 152 SGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSW 211

Query: 217 -----GLFNDCF-EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALK 270
                G   + F   A+    QM+  G KP++ T   VL A   L  +R+ +S HG A +
Sbjct: 212 NTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFR 271

Query: 271 TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVEL 330
             +E  + VA A+LD Y K G + +AR +F+ M  ++V+ W+ MI  YAQ   S +A   
Sbjct: 272 AGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFAT 331

Query: 331 FCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAK 390
           F +M    V P   + +  L ACA +  L+ G  +H L+    +  DV V N+L+ +Y+K
Sbjct: 332 FLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSK 391

Query: 391 CGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
           C R++ +  +F     +  VTWN MI+GY Q G V +A+ +F +M    +     T  SV
Sbjct: 392 CKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSV 451

Query: 451 LRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE 510
           + A A L+       +H L ++   D +V V  ALID +AKCG+I  AR +FD+M + + 
Sbjct: 452 ITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHV 511

Query: 511 VSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKS 570
           ++WNAMI GY  +G   E L +F+ MQ    +PN +TF+ V++ACS+ GL+E+G  YF+S
Sbjct: 512 ITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFES 571

Query: 571 MVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
           M  NYG+EP ++HY +MV LLGRAG LD A K I+ +P +P + +  A+LGAC IH NVE
Sbjct: 572 MKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVE 631

Query: 631 IGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQ 679
           +G  +A  + D +P+D   HVLL+N+YA A  W+K A            K PG S +E +
Sbjct: 632 LGEKTADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVELR 691

Query: 680 GMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSE 739
             VH F +G T+H     I   LE L  + + AGY+PD +++  DV ED KE+ L  HSE
Sbjct: 692 NEVHTFYSGSTNHPQSKRIYAYLETLGDEMKAAGYVPDTNSI-HDVEEDVKEQLLSSHSE 750

Query: 740 KLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCC 799
           +LA+AF L      + I I KNLR+C DCH A K IS +  REII+RD+ RFHHF++G C
Sbjct: 751 RLAIAFGLLNTRHGTAIHIRKNLRVCGDCHEATKYISLVTGREIIVRDLRRFHHFKNGIC 810

Query: 800 SCGDFW 805
           SCGD+W
Sbjct: 811 SCGDYW 816


>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
          Length = 785

 Score =  511 bits (1316), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 283/751 (37%), Positives = 421/751 (56%), Gaps = 35/751 (4%)

Query: 67  IQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFV 126
           ++N +L  A     Q+ +K    +  +TN++++ YVK   L +A KLFD M ER  +++ 
Sbjct: 58  LKNGELSQAR----QLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWT 113

Query: 127 TTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKL 186
             I GY+  +QF EA  LF  + R G E +   F   L              V   + KL
Sbjct: 114 ILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKL 173

Query: 187 GHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFA 246
           G+DS   VG  L+D++     ++ A          C       F +M  +    ++FTFA
Sbjct: 174 GYDSRLIVGNTLVDSYCKSNRLDLA----------C-----QLFKEMPEI----DSFTFA 214

Query: 247 FVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK 306
            VL A +GLD I + +  H   +KT +  +++V+ ALLD Y+K   + +AR++F+EMP++
Sbjct: 215 AVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQ 274

Query: 307 DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIH 366
           D + ++ +I+ YA       A +LF  ++       QF F ++L   +     ++G QIH
Sbjct: 275 DGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIH 334

Query: 367 SLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVG 426
           +  +     S++ V N+L+D+YAKCG+ E +  +F     R+ V W  MI  YVQ G   
Sbjct: 335 AQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYE 394

Query: 427 KAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALI 486
           + + +F+KM +  V A + T++S+LRA AS+A+L  G Q+H   +K+ +  +V   +AL+
Sbjct: 395 EGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALL 454

Query: 487 DMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNL 546
           D+YAKCGSI DA   F  M D N VSWNAMIS Y+ +G +   LK F  M   G +P+++
Sbjct: 455 DVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSV 514

Query: 547 TFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEG 606
           +F+GVLSACS+ GL+E+G  +F SM   Y ++P  EHY S+V +L R+G  ++A KL+  
Sbjct: 515 SFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAE 574

Query: 607 IPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEP-EDEATHVLLSNIYAMARSWE- 664
           +P  P  ++W ++L AC IH N E+ R +A  + + E   D A +V +SNIYA A  WE 
Sbjct: 575 MPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWEN 634

Query: 665 ----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGY 714
                     +   K P  SW+E +   H F A D  H  +  IR  ++ L     + GY
Sbjct: 635 VSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGY 694

Query: 715 IPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKI 774
            PD S  L +  E  K   L  HSE+LA+AFAL   P  SPI ++KNLR C+DCH AIK+
Sbjct: 695 KPDTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKV 754

Query: 775 ISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           ISKIV REI +RD  RFHHF+DG CSCGDFW
Sbjct: 755 ISKIVGREITVRDSTRFHHFRDGFCSCGDFW 785



 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 159/612 (25%), Positives = 277/612 (45%), Gaps = 89/612 (14%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           ++ T L  C  ++       +  Q++K G    L   N L++ Y K NRL  A +LF EM
Sbjct: 146 TFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEM 205

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
           P                                   E++ F F A L   + +    L  
Sbjct: 206 P-----------------------------------EIDSFTFAAVLCANIGLDDIVLGQ 230

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FND 221
            + + V K     N FV  AL+D +S    V  ARK+FD +                ++ 
Sbjct: 231 QIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDG 290

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
             + A + F +++   F    F FA +L          + +  H   + T  + ++ V  
Sbjct: 291 KHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGN 350

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           +L+D+Y K G+   A  IF  +  +  +PW+ MI+ Y Q     + ++LF +MRQA V  
Sbjct: 351 SLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIA 410

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           +Q TF S+L+A A++  L LG Q+HS +++ G +S+VF  +AL+DVYAKCG ++++V+ F
Sbjct: 411 DQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTF 470

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
            E P RN V+WN MI  Y Q GE    +  F +M+   +    V++  VL AC+    +E
Sbjct: 471 QEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVE 530

Query: 462 PGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMIS 518
            G+  H  ++   Y +D    +  +++DM  + G   +A +L+ +M  D +E+ W+++++
Sbjct: 531 EGLW-HFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLN 589

Query: 519 GYSMHGLSAEVLK-----VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA 573
              +H  + E+ +     +F++ + R   P    +V + +  +  G  E      K+M  
Sbjct: 590 ACRIHK-NQELARRAADQLFNMEELRDAAP----YVNMSNIYAAAGQWENVSKVHKAM-R 643

Query: 574 NYGIEPC-------IEHYTSMVSLLGR--------AGHLDKAAKLIEGIPFQPSVMIWRA 618
           + G++         I+H T M S   R           +D   K +E + ++P       
Sbjct: 644 DRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDT----- 698

Query: 619 LLGACIIHNNVE 630
              +C +HN  E
Sbjct: 699 ---SCALHNEDE 707



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 188/389 (48%), Gaps = 32/389 (8%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E +S ++A  L + I  DD+     IH  V+K     ++F +N LL+ Y K + + DA K
Sbjct: 207 EIDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARK 266

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLV-SMG 171
           LFDEMPE++ +S+   I GY    +   A  LF  L     +   F F   L +   ++ 
Sbjct: 267 LFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLD 326

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDC--------- 222
           W E+   + A       DS   VG +L+D ++ CG  E A  +F  L +           
Sbjct: 327 W-EMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMIS 385

Query: 223 -------FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
                  +EE L  F++MR      +  TFA +L+A   + ++ + K  H   +K+ +  
Sbjct: 386 AYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMS 445

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
           +++   ALLD+Y K G I +A + F+EMP ++++ W+ MI+ YAQ   +   ++ F  M 
Sbjct: 446 NVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMV 505

Query: 336 QAFVAPNQFTFVSVLQACA----TMEGL---DLGNQIHSLVVRVGLLSDVFVSNALMDVY 388
            + + P+  +F+ VL AC+      EGL   +   QI+ L  R    + V      +D+ 
Sbjct: 506 LSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASV------VDML 559

Query: 389 AKCGRMENSVELFAESP-KRNHVTWNTMI 416
            + GR   + +L AE P   + + W++++
Sbjct: 560 CRSGRFNEAEKLMAEMPIDPDEIMWSSVL 588



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 107/434 (24%), Positives = 192/434 (44%), Gaps = 80/434 (18%)

Query: 238 FKPNNFTFAFVLKACLGLDT----IRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
           F+PN       L +   L +    + V  +     +KT ++ D   +   +  + K+GE+
Sbjct: 4   FRPNALQNLTSLTSLASLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGEL 63

Query: 294 SNARRIFEEMPKKDVIP-------------------------------WSFMIARYAQTD 322
           S AR++FE+MP K+ +                                W+ +I  Y+Q +
Sbjct: 64  SQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLN 123

Query: 323 LSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI---HSLVVRVGLLSDVF 379
              +A ELF +M++    P+  TFV++L  C    G ++GNQI    + ++++G  S + 
Sbjct: 124 QFKEAFELFVQMQRCGTEPDYVTFVTLLSGC---NGHEMGNQITQVQTQIIKLGYDSRLI 180

Query: 380 VSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ 439
           V N L+D Y K  R++ + +LF E P+ +                               
Sbjct: 181 VGNTLVDSYCKSNRLDLACQLFKEMPEID------------------------------- 209

Query: 440 VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR 499
                 T+++VL A   L  +  G Q+H   +K N+  +V V+NAL+D Y+K  S+ DAR
Sbjct: 210 ----SFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDAR 265

Query: 500 LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGG 559
            +FD M + + VS+N +ISGY+  G       +F  +Q   +      F  +LS  SN  
Sbjct: 266 KLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTL 325

Query: 560 LLEQG-EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRA 618
             E G + + +++V     E  + +  S+V +  + G  ++A  +   +  + +V  W A
Sbjct: 326 DWEMGRQIHAQTIVTTADSEILVGN--SLVDMYAKCGKFEEAEMIFTNLTHRSAV-PWTA 382

Query: 619 LLGACIIHNNVEIG 632
           ++ A +     E G
Sbjct: 383 MISAYVQKGFYEEG 396



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 73/368 (19%), Positives = 142/368 (38%), Gaps = 53/368 (14%)

Query: 47  ITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNR 106
           + F+  +     +AT L       D +    IH Q +      ++   N L+++Y K  +
Sbjct: 302 LQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGK 361

Query: 107 LPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV 166
             +A  +F  +  R+ + +   I  Y     + E + LF+ + +     +   F + L+ 
Sbjct: 362 FEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRA 421

Query: 167 LVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------- 218
             S+    L   + + + K G  SN F G+AL+D ++ CG ++ A + F  +        
Sbjct: 422 SASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSW 481

Query: 219 --------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALK 270
                    N   E  L  F +M   G +P++ +F  VL AC     +      H  ++ 
Sbjct: 482 NAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGL-WHFNSMT 540

Query: 271 TCYEMDLYVA--VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAV 328
             Y++D       +++D+  +SG  + A ++  EMP                        
Sbjct: 541 QIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMP------------------------ 576

Query: 329 ELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVY 388
                     + P++  + SVL AC   +  +L  +    +  +  L D      + ++Y
Sbjct: 577 ----------IDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIY 626

Query: 389 AKCGRMEN 396
           A  G+ EN
Sbjct: 627 AAAGQWEN 634


>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1582

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 273/713 (38%), Positives = 404/713 (56%), Gaps = 28/713 (3%)

Query: 121  NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVF 180
            + I++  T+  +    +  EAV  F  +       +   F   L V+  +   EL   + 
Sbjct: 870  DVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIH 929

Query: 181  ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF-----------DGLFNDC----FEE 225
              V + G D    VG  LI+ +   G V  AR VF           + + + C     EE
Sbjct: 930  GIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEE 989

Query: 226  -ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDT-IRVAKSAHGCALKTCYEMDLYVAVAL 283
             ++  F  +   G  P+ FT A VL+AC  L     +A   H CA+K    +D +V+  L
Sbjct: 990  CSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTL 1049

Query: 284  LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
            +D+Y+KSG++  A  +F      D+  W+ M+  Y  +     A+ L+  M+++    NQ
Sbjct: 1050 IDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQ 1109

Query: 344  FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
             T  +  +A   + GL  G QI ++VV+ G   D+FV + ++D+Y KCG ME++  +F E
Sbjct: 1110 ITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNE 1169

Query: 404  SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
             P  + V W TMI G V+ G+   A+  +  M   +V   E T++++++AC+ L ALE G
Sbjct: 1170 IPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQG 1229

Query: 464  MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMH 523
             Q+H  TVK N   D  V  +L+DMYAKCG+I DAR +F   N     SWNAMI G + H
Sbjct: 1230 RQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQH 1289

Query: 524  GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEH 583
            G + E L+ F+ M+ RG  P+ +TF+GVLSACS+ GL+ +    F SM   YGIEP IEH
Sbjct: 1290 GNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEH 1349

Query: 584  YTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFE 643
            Y+ +V  L RAG + +A K+I  +PF+ S  ++R LL AC +  + E G+  A+ +L  E
Sbjct: 1350 YSCLVDALSRAGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALE 1409

Query: 644  PEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSH 692
            P D A +VLLSN+YA A  WE  AS           K+PG SW++ +  VH F AGD SH
Sbjct: 1410 PSDSAAYVLLSNVYAAANQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLFVAGDRSH 1469

Query: 693  ADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPP 752
             + ++I   +E++  + R+ GY+PD    L DV E++KE  L+ HSEKLA+A+ L K PP
Sbjct: 1470 EETDVIYNKVEYIMKRIREEGYLPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPP 1529

Query: 753  SSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            S+ +R+IKNLR+C DCH AIK ISK+ +RE+++RD +RFHHF+ G CSCGD+W
Sbjct: 1530 STTLRVIKNLRVCGDCHNAIKYISKVFEREVVLRDANRFHHFRSGVCSCGDYW 1582



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 160/580 (27%), Positives = 287/580 (49%), Gaps = 20/580 (3%)

Query: 57   HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
            H+ A   + C+ +     A ++H   +K G   D+F    L+N+Y K  R+ +A  LFD 
Sbjct: 728  HTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDG 787

Query: 117  MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS----MGW 172
            M  R+ + +   ++ Y  +    EA+ LFS  +R G   +        +V+ S    + W
Sbjct: 788  MGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLEW 847

Query: 173  AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQ 232
                  + A   KL    +   G+ +I             + ++ +  DCF + +N  S+
Sbjct: 848  Q--LKQLKAYGTKLFMYDDDDDGSDVIAWNKTLSWFLQRGETWEAV--DCFVDMIN--SR 901

Query: 233  MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
            +   G      TF  +L    GL+ + + K  HG  +++  +  + V   L+++Y K+G 
Sbjct: 902  VACDG-----LTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGS 956

Query: 293  ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
            +S AR +F +M + D++ W+ MI+  A + L   +V +F  + +  + P+QFT  SVL+A
Sbjct: 957  VSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRA 1016

Query: 353  CATM-EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
            C+++  G  L  QIH+  ++ G++ D FVS  L+DVY+K G+ME +  LF      +  +
Sbjct: 1017 CSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLAS 1076

Query: 412  WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
            WN M+ GY+  G+  KA+ ++  M E    A ++T ++  +A   L  L+ G Q+  + V
Sbjct: 1077 WNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVV 1136

Query: 472  KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
            K  +++D+ V + ++DMY KCG +  AR +F+ +   ++V+W  MISG   +G     L 
Sbjct: 1137 KRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALF 1196

Query: 532  VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA-NYGIEPCIEHYTSMVSL 590
             +  M+    +P+  TF  ++ ACS    LEQG     + V  N   +P +   TS+V +
Sbjct: 1197 TYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFV--MTSLVDM 1254

Query: 591  LGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
              + G+++ A  L +       +  W A++     H N E
Sbjct: 1255 YAKCGNIEDARGLFKRTN-TSRIASWNAMIVGLAQHGNAE 1293



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 136/453 (30%), Positives = 225/453 (49%), Gaps = 20/453 (4%)

Query: 72   LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
            L+    IH  V++ G    +   N L+N+YVK   +  A  +F +M E + +S+ T I G
Sbjct: 922  LELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISG 981

Query: 132  YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA-ELCPCVFACVYKLGHDS 190
              +S     +VG+F  L R G   + F   + L+   S+G    L   + AC  K G   
Sbjct: 982  CALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVL 1041

Query: 191  NAFVGTALIDAFSVCGCVEFARKVF---DG-------------LFNDCFEEALNFFSQMR 234
            ++FV T LID +S  G +E A  +F   DG             + +  F +AL  +  M+
Sbjct: 1042 DSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQ 1101

Query: 235  AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
              G + N  T A   KA  GL  ++  K      +K  + +DL+V   +LD+Y K GE+ 
Sbjct: 1102 ESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEME 1161

Query: 295  NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
            +ARRIF E+P  D + W+ MI+   +      A+  +  MR + V P+++TF ++++AC+
Sbjct: 1162 SARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACS 1221

Query: 355  TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
             +  L+ G QIH+  V++    D FV  +L+D+YAKCG +E++  LF  +      +WN 
Sbjct: 1222 LLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNA 1281

Query: 415  MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
            MIVG  Q G   +A+  F +M    V    VT+  VL AC+    +    + +  +++  
Sbjct: 1282 MIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYE-NFYSMQKI 1340

Query: 475  YDMDVVVAN--ALIDMYAKCGSITDARLVFDMM 505
            Y ++  + +   L+D  ++ G I +A  V   M
Sbjct: 1341 YGIEPEIEHYSCLVDALSRAGRIREAEKVISSM 1373



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 158/598 (26%), Positives = 267/598 (44%), Gaps = 50/598 (8%)

Query: 63   LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPE--R 120
            L+  I   DL      H ++L  G+  D F TN L+ +Y K   L  A KLFD  P+  R
Sbjct: 633  LRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSR 692

Query: 121  NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVF 180
            + +++   +  +   ++  +   LF  L R              K+ +          + 
Sbjct: 693  DLVTWNAILSAHADKAR--DGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLH 750

Query: 181  ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG-------LFNDCFE--------- 224
                K+G   + FV  AL++ ++  G +  AR +FDG       L+N   +         
Sbjct: 751  GYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEY 810

Query: 225  EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
            EAL  FS+    G +P++ T   +          RV KS          ++  Y     +
Sbjct: 811  EALLLFSEFNRTGLRPDDVTLCTL---------ARVVKSKQNVLEWQLKQLKAYGTKLFM 861

Query: 285  DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
                  G               DVI W+  ++ + Q   + +AV+ F  M  + VA +  
Sbjct: 862  YDDDDDG--------------SDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGL 907

Query: 345  TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
            TFV +L   A +  L+LG QIH +VVR GL   V V N L+++Y K G +  +  +F + 
Sbjct: 908  TFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQM 967

Query: 405  PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL-AALEPG 463
             + + V+WNTMI G    G    ++ MF  +L   +   + T +SVLRAC+SL       
Sbjct: 968  NEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLA 1027

Query: 464  MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMH 523
             Q+H   +KA   +D  V+  LID+Y+K G + +A  +F   + ++  SWNAM+ GY + 
Sbjct: 1028 TQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVS 1087

Query: 524  GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGL--LEQGEAYFKSMVANYGIEPCI 581
            G   + L+++ LMQ+ G R N +T      A   GGL  L+QG+   +++V   G    +
Sbjct: 1088 GDFPKALRLYILMQESGERANQITLANAAKAA--GGLVGLKQGKQ-IQAVVVKRGFNLDL 1144

Query: 582  EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHI 639
               + ++ +  + G ++ A ++   IP  P  + W  ++  C+ +   E    +  H+
Sbjct: 1145 FVISGVLDMYLKCGEMESARRIFNEIP-SPDDVAWTTMISGCVENGQEEHALFTYHHM 1201



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 133/491 (27%), Positives = 225/491 (45%), Gaps = 54/491 (10%)

Query: 187  GHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN----------------DCFEEALNFF 230
            GH  + F+   LI  +S CG +  ARK+FD   +                D   +  + F
Sbjct: 656  GHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAHADKARDGFHLF 715

Query: 231  SQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKS 290
              +R         T A V K CL   +   A+S HG A+K   + D++VA AL+++Y K 
Sbjct: 716  RLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKF 775

Query: 291  GEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVL 350
            G I  AR +F+ M  +DV+ W+ M+  Y  T L  +A+ LF    +  + P+  T  ++ 
Sbjct: 776  GRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTLA 835

Query: 351  QACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHV 410
            +   + + + L  Q+  L          + +   M      G               + +
Sbjct: 836  RVVKSKQNV-LEWQLKQL--------KAYGTKLFMYDDDDDG--------------SDVI 872

Query: 411  TWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLT 470
             WN  +  ++Q GE  +A+  F  M+  +V    +T+  +L   A L  LE G Q+H + 
Sbjct: 873  AWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIV 932

Query: 471  VKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVL 530
            V++  D  V V N LI+MY K GS++ AR VF  MN+ + VSWN MISG ++ GL    +
Sbjct: 933  VRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSV 992

Query: 531  KVFDLMQQRGWRPNNLTFVGVLSACSN--GGLLEQGEAYFKSMVANYGIEPCIEHYTSMV 588
             +F  + + G  P+  T   VL ACS+  GG     + +  +M A   ++  +   T+++
Sbjct: 993  GMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVS--TTLI 1050

Query: 589  SLLGRAGHLDKAAKLI---EGIPFQPSVMIWRALLGACIIHNNVEIG-RLSAQHILDFEP 644
             +  ++G +++A  L    +G      +  W A++   I+  +     RL   +IL  E 
Sbjct: 1051 DVYSKSGKMEEAEFLFVNQDGF----DLASWNAMMHGYIVSGDFPKALRL---YILMQES 1103

Query: 645  EDEATHVLLSN 655
             + A  + L+N
Sbjct: 1104 GERANQITLAN 1114



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 162/349 (46%), Gaps = 19/349 (5%)

Query: 75   AMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTV 134
            A  IH   +K G  LD F +  L++VY K  ++ +A  LF      +  S+   + GY V
Sbjct: 1027 ATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIV 1086

Query: 135  SSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFV 194
            S  F +A+ L+  +   G   N        K    +   +    + A V K G + + FV
Sbjct: 1087 SGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFV 1146

Query: 195  GTALIDAFSVCGCVEFARKVFD-----------GLFNDCF-----EEALNFFSQMRAVGF 238
             + ++D +  CG +E AR++F+            + + C      E AL  +  MR    
Sbjct: 1147 ISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKV 1206

Query: 239  KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
            +P+ +TFA ++KAC  L  +   +  H   +K     D +V  +L+D+Y K G I +AR 
Sbjct: 1207 QPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARG 1266

Query: 299  IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
            +F+      +  W+ MI   AQ   + +A++ F  M+   V P++ TF+ VL AC +  G
Sbjct: 1267 LFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSAC-SHSG 1325

Query: 359  L--DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
            L  +     +S+    G+  ++   + L+D  ++ GR+  + ++ +  P
Sbjct: 1326 LVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSMP 1374



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 88/380 (23%), Positives = 174/380 (45%), Gaps = 29/380 (7%)

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP--K 305
           +L+  +    + + K AH   L + +  D ++   L+ +Y+K G +S+AR++F+  P   
Sbjct: 632 ILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTS 691

Query: 306 KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
           +D++ W+ +++  A  D + D   LF  +R++FV+  + T   V + C           +
Sbjct: 692 RDLVTWNAILS--AHADKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESL 749

Query: 366 HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEV 425
           H   V++GL  DVFV+ AL+++YAK GR+  +  LF     R+ V WN M+  YV  G  
Sbjct: 750 HGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLE 809

Query: 426 GKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANAL 485
            +A+++FS+     +   +VT  ++ R   S   +   ++     +KA Y   +      
Sbjct: 810 YEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNV---LEWQLKQLKA-YGTKLF----- 860

Query: 486 IDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNN 545
             MY      +D             ++WN  +S +   G + E +  F  M       + 
Sbjct: 861 --MYDDDDDGSDV------------IAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDG 906

Query: 546 LTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
           LTFV +LS  +    LE G+     +V   G++  +     ++++  + G + +A  +  
Sbjct: 907 LTFVVMLSVVAGLNCLELGKQ-IHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFW 965

Query: 606 GIPFQPSVMIWRALLGACII 625
            +  +  ++ W  ++  C +
Sbjct: 966 QMN-EVDLVSWNTMISGCAL 984



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/232 (30%), Positives = 112/232 (48%), Gaps = 15/232 (6%)

Query: 330 LFCRMRQAFVAPNQF-----------TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDV 378
           +  R+R A    N F            + S+L+       L LG + H+ ++  G   D 
Sbjct: 602 MHLRLRAATSTANPFIPPAHLIHSIPQWFSILRHAIAASDLPLGKRAHARILTSGHHPDR 661

Query: 379 FVSNALMDVYAKCGRMENSVELFAESP--KRNHVTWNTMIVGYVQLGEVGKAMIMFSKML 436
           F++N L+ +Y+KCG + ++ +LF  +P   R+ VTWN ++  +      G    +F  + 
Sbjct: 662 FLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAHADKARDG--FHLFRLLR 719

Query: 437 EEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSIT 496
              V AT  T + V + C   A+      +H   VK     DV VA AL+++YAK G I 
Sbjct: 720 RSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIR 779

Query: 497 DARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTF 548
           +AR++FD M   + V WN M+  Y   GL  E L +F    + G RP+++T 
Sbjct: 780 EARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTL 831



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 119/253 (47%), Gaps = 23/253 (9%)

Query: 72   LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
            L+    I   V+K+G  LDLF  + +L++Y+K   +  A ++F+E+P  + +++ T I G
Sbjct: 1125 LKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISG 1184

Query: 132  YTVSSQFVEAVGLFSTLHREGHELNP--FAFTAFLKVLVSMGWAELCPCVFACVYKLGHD 189
               + Q  E   LF+  H    ++ P  + F   +K    +   E    + A   KL   
Sbjct: 1185 CVENGQ--EEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCA 1242

Query: 190  SNAFVGTALIDAFSVCGCVEFARKVFD---------------GLF-NDCFEEALNFFSQM 233
             + FV T+L+D ++ CG +E AR +F                GL  +   EEAL FF +M
Sbjct: 1243 FDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEM 1302

Query: 234  RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY--EMDLYVAVALLDLYTKSG 291
            ++ G  P+  TF  VL AC     +  A   +  +++  Y  E ++     L+D  +++G
Sbjct: 1303 KSRGVTPDRVTFIGVLSACSHSGLVSEAYE-NFYSMQKIYGIEPEIEHYSCLVDALSRAG 1361

Query: 292  EISNARRIFEEMP 304
             I  A ++   MP
Sbjct: 1362 RIREAEKVISSMP 1374


>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
          Length = 865

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 283/807 (35%), Positives = 429/807 (53%), Gaps = 102/807 (12%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           ++   N+++N Y K   L DA +LFD MP R+  S+ T + GY  + +F++ +  F ++H
Sbjct: 70  NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMH 129

Query: 150 REGHEL-NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCV 208
           R G  L N F F   +K   ++G  EL P +    +K     +  V TAL+D F  CG V
Sbjct: 130 RSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYV 189

Query: 209 EFARKVFDGL---------------------------FNDCFE----------------- 224
           +FA ++F  +                           F D  E                 
Sbjct: 190 DFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSG 249

Query: 225 ---EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
              EAL    +M   G + ++ T+   L AC  L ++   K  H   +++  ++D YVA 
Sbjct: 250 RVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVAS 309

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           AL++LY K G    A+R+F  +  ++ + W+ +I    Q +    +VELF +MR   +A 
Sbjct: 310 ALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAI 369

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           +QF   +++  C     L LG Q+HSL ++ G    + VSN+L+ +YAKCG ++N+  +F
Sbjct: 370 DQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVF 429

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKA-------------------------------MI 430
           +   +R+ V+W +MI  Y Q+G + KA                               + 
Sbjct: 430 SSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLK 489

Query: 431 MFSKMLEEQ-VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMY 489
           M+S ML ++ V    VTY ++ R CA + A + G Q+   TVKA   ++V VANA I MY
Sbjct: 490 MYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMY 549

Query: 490 AKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFV 549
           +KCG I++A+ +FD++N  + VSWNAMI+GYS HG+  +  K FD M  +G +P+ +++V
Sbjct: 550 SKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYV 609

Query: 550 GVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF 609
            VLS CS+ GL+++G+ YF  M   +GI P +EH++ MV LLGRAGHL +A  LI+ +P 
Sbjct: 610 AVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPM 669

Query: 610 QPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-- 667
           +P+  +W ALL AC IH N E+  L+A+H+ + +  D  +++LL+ IY+ A   + +A  
Sbjct: 670 KPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQV 729

Query: 668 ---------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDL 718
                     K PG SW+E +  VH F+A D SH  +  IR  L+ L  K    GY+   
Sbjct: 730 RKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKLDELMEKIAHLGYV--- 786

Query: 719 SAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKI 778
                     E  R    HSEKLA+AF +  +P   PI I+KNLRIC DCHT IK+IS +
Sbjct: 787 --------RTESPRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSV 838

Query: 779 VQREIIIRDVHRFHHFQDGCCSCGDFW 805
             RE +IRD  RFHHF+ G CSCGD+W
Sbjct: 839 TDREFVIRDGVRFHHFKSGSCSCGDYW 865



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 121/487 (24%), Positives = 207/487 (42%), Gaps = 105/487 (21%)

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR------ 298
            A  L++C     +  A++ HG  +       +++   LL  Y   G +S+ARR      
Sbjct: 7   LADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADI 66

Query: 299 --------------------------IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFC 332
                                     +F+ MP++DV  W+ +++ Y Q    +D +E F 
Sbjct: 67  KEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFV 126

Query: 333 RM-RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC 391
            M R     PN FTF  V+++C  +   +L  Q+  L  +     D  V  AL+D++ +C
Sbjct: 127 SMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRC 186

Query: 392 GR-------------------------------MENSVELFAESPKRNHVTWNTMIVGYV 420
           G                                +++++E F +  +R+ V+WN MI    
Sbjct: 187 GYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALS 246

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV 480
           Q G V +A+ +  +M  + V     TY+S L ACA L +L  G Q+H   +++   +D  
Sbjct: 247 QSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPY 306

Query: 481 VANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG 540
           VA+ALI++YAKCGS  +A+ VF+ + D N VSW  +I G   +   ++ +++F+ M+   
Sbjct: 307 VASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAEL 366

Query: 541 WRPNNLTFVGVLSACSNG-----------------------------------GLLEQGE 565
              +      ++S C N                                    G L+  E
Sbjct: 367 MAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAE 426

Query: 566 AYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACII 625
             F SM      E  I  +TSM++   + G++ KA +  +G+  + ++  W A+LGA I 
Sbjct: 427 FVFSSMS-----ERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAI-TWNAMLGAYIQ 480

Query: 626 HNNVEIG 632
           H   E G
Sbjct: 481 HGAEEDG 487



 Score = 42.4 bits (98), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 25/107 (23%), Positives = 48/107 (44%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +Y T  + C      +    I    +K G  L++   N  + +Y K  R+ +A KLFD +
Sbjct: 506 TYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLL 565

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFL 164
             ++ +S+   I GY+      +A   F  +  +G + +  ++ A L
Sbjct: 566 NGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVL 612


>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  509 bits (1312), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 287/761 (37%), Positives = 425/761 (55%), Gaps = 34/761 (4%)

Query: 75  AMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTV 134
           A  +H  ++  G    +F +  L+N+Y  L  +  +   FD++P+++  ++ + I  Y  
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVH 194

Query: 135 SSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFV 194
           +  F EA+G F  L     E+ P  F  F  VL + G       +    +KLG   N FV
Sbjct: 195 NGHFHEAIGCFYQLLLVS-EIRP-DFYTFPPVLKACGTLVDGRRIHCWAFKLGFQWNVFV 252

Query: 195 GTALIDAFSVCGCVEFARKVFD---------------GLF-NDCFEEALNFFSQMRAVGF 238
             +LI  +S  G    AR +FD               GL  N    +AL+   +MR  G 
Sbjct: 253 AASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGI 312

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
           K N  T   +L  C  L  I  A   H   +K   E DL+V+ AL+++Y K G + +AR+
Sbjct: 313 KMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARK 372

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
            F++M   DV+ W+ +IA Y Q D  + A   F +M+     P+  T VS+    A    
Sbjct: 373 AFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRD 432

Query: 359 LDLGNQIHSLVVRVG-LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIV 417
                 +H  ++R G L+ DV + NA++D+YAK G ++++ ++F     ++ ++WNT+I 
Sbjct: 433 CKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLIT 492

Query: 418 GYVQLGEVGKAMIMFSKMLEE--QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY 475
           GY Q G   +A+ ++ KM+EE  ++   + T+ S+L A A + AL+ GM++H   +K N 
Sbjct: 493 GYAQNGLASEAIEVY-KMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNL 551

Query: 476 DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDL 535
            +DV VA  LID+Y KCG + DA  +F  +   + V+WNA+IS + +HG + + LK+F  
Sbjct: 552 HLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGE 611

Query: 536 MQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAG 595
           M   G +P+++TFV +LSACS+ G +E+G+  F+ M   YGI+P ++HY  MV LLGRAG
Sbjct: 612 MLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM-QEYGIKPSLKHYGCMVDLLGRAG 670

Query: 596 HLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSN 655
           +L+ A   I+ +P QP   IW ALLGAC IH N+E+G+ ++  + + + ++   +VLLSN
Sbjct: 671 YLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSN 730

Query: 656 IYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEW 704
           IYA    WE           +   K PG S IE    V  F  G+ SH     I   L  
Sbjct: 731 IYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRV 790

Query: 705 LNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRI 764
           L  K +  GYIPD S VL+DV EDEKE  L  HSE+LA+AF +   PP SPIRI KNLR+
Sbjct: 791 LTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRV 850

Query: 765 CVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           C DCH A K IS+I QREI++RD +RFHHF+DG CSCGD+W
Sbjct: 851 CGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/386 (24%), Positives = 173/386 (44%), Gaps = 24/386 (6%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L  C Q  D+ TAM IH  V+K G   DLF +N L+N+Y K   L DA K F +M   + 
Sbjct: 323 LPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDV 382

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +S+ + I  Y  +   V A G F  +   G + +     +   ++      +    V   
Sbjct: 383 VSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGF 442

Query: 183 VYKLGH-DSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEE 225
           + + G    +  +G A++D ++  G ++ A KVF+ +                 N    E
Sbjct: 443 IMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASE 502

Query: 226 ALNFFSQMRAVG-FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           A+  +  M       PN  T+  +L A   +  ++     HG  +KT   +D++VA  L+
Sbjct: 503 AIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLI 562

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
           D+Y K G + +A  +F ++P++  + W+ +I+ +     +   ++LF  M    V P+  
Sbjct: 563 DVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHV 622

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           TFVS+L AC+    ++ G     L+   G+   +     ++D+  + G +E +     + 
Sbjct: 623 TFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDM 682

Query: 405 PKRNHVT-WNTM-----IVGYVQLGE 424
           P +   + W  +     I G ++LG+
Sbjct: 683 PLQPDASIWGALLGACRIHGNIELGK 708


>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
          Length = 865

 Score =  509 bits (1312), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 282/802 (35%), Positives = 427/802 (53%), Gaps = 102/802 (12%)

Query: 95  NVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHE 154
           N+++N Y K   L DA +LFD MP R+  S+ T + GY  + +F++ +  F ++HR G  
Sbjct: 75  NIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDS 134

Query: 155 L-NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARK 213
           L N F F   +K   ++G  EL P +    +K     +  V TAL+D F  CG V+FA +
Sbjct: 135 LPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASR 194

Query: 214 VFDGL---------------------------FNDCFE--------------------EA 226
           +F  +                           F D  E                    EA
Sbjct: 195 LFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREA 254

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           L    +M   G + ++ T+   L AC  L ++   K  H   +++  ++D YVA AL++L
Sbjct: 255 LGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIEL 314

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y K G    A+R+F  +  ++ + W+ +I    Q +    +VELF +MR   +A +QF  
Sbjct: 315 YAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFAL 374

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
            +++  C     L LG Q+HSL ++ G    + VSN+L+ +YAKCG ++N+  +F+   +
Sbjct: 375 ATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSE 434

Query: 407 RNHVTWNTMIVGYVQLGEVGKA-------------------------------MIMFSKM 435
           R+ V+W +MI  Y Q+G + KA                               + M+S M
Sbjct: 435 RDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAM 494

Query: 436 LEEQ-VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGS 494
           L ++ V    VTY ++ R CA + A + G Q+   TVKA   ++V VANA I MY+KCG 
Sbjct: 495 LSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGR 554

Query: 495 ITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSA 554
           I++A+ +FD++N  + VSWNAMI+GYS HG+  +  K FD M  +G +P+ +++V VLS 
Sbjct: 555 ISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSG 614

Query: 555 CSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVM 614
           CS+ GL+++G+ YF  M   +GI P +EH++ MV LLGRAGHL +A  LI+ +P +P+  
Sbjct: 615 CSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAE 674

Query: 615 IWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA------- 667
           +W ALL AC IH N E+  L+A+H+ + +  D  +++LL+ IY+ A   + +A       
Sbjct: 675 VWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMR 734

Query: 668 ----SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLR 723
                K PG SW+E +  VH F+A D SH  +  IR  ++ L  K    GY+        
Sbjct: 735 DKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGYV-------- 786

Query: 724 DVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREI 783
                E  R    HSEKLA+AF +  +P   PI I+KNLRIC DCHT IK+IS +  RE 
Sbjct: 787 ---RTESPRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREF 843

Query: 784 IIRDVHRFHHFQDGCCSCGDFW 805
           +IRD  RFHHF+ G CSCGD+W
Sbjct: 844 VIRDGVRFHHFKSGSCSCGDYW 865



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 121/487 (24%), Positives = 207/487 (42%), Gaps = 105/487 (21%)

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR------ 298
            A  L++C     +  A++ HG  +       +++   LL  Y   G +S+ARR      
Sbjct: 7   LADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADI 66

Query: 299 --------------------------IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFC 332
                                     +F+ MP++DV  W+ +++ Y Q    +D +E F 
Sbjct: 67  KEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFV 126

Query: 333 RM-RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC 391
            M R     PN FTF  V+++C  +   +L  Q+  L  +     D  V  AL+D++ +C
Sbjct: 127 SMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRC 186

Query: 392 GR-------------------------------MENSVELFAESPKRNHVTWNTMIVGYV 420
           G                                +++++E F +  +R+ V+WN MI    
Sbjct: 187 GYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALS 246

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV 480
           Q G V +A+ +  +M  + V     TY+S L ACA L +L  G Q+H   +++   +D  
Sbjct: 247 QSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPY 306

Query: 481 VANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG 540
           VA+ALI++YAKCGS  +A+ VF+ + D N VSW  +I G   +   ++ +++F+ M+   
Sbjct: 307 VASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAEL 366

Query: 541 WRPNNLTFVGVLSACSNG-----------------------------------GLLEQGE 565
              +      ++S C N                                    G L+  E
Sbjct: 367 MAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAE 426

Query: 566 AYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACII 625
             F SM      E  I  +TSM++   + G++ KA +  +G+  + ++  W A+LGA I 
Sbjct: 427 FVFSSMS-----ERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAI-TWNAMLGAYIQ 480

Query: 626 HNNVEIG 632
           H   E G
Sbjct: 481 HGAEEDG 487



 Score = 42.4 bits (98), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 25/107 (23%), Positives = 48/107 (44%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +Y T  + C      +    I    +K G  L++   N  + +Y K  R+ +A KLFD +
Sbjct: 506 TYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLL 565

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFL 164
             ++ +S+   I GY+      +A   F  +  +G + +  ++ A L
Sbjct: 566 NGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVL 612


>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 839

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 288/807 (35%), Positives = 452/807 (56%), Gaps = 48/807 (5%)

Query: 43  TTTPITFSVSEFNSHSYATSL--QSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNV 100
           TT  +T + S  N+    +SL  + CI+  +      +H ++      LD    N L+ +
Sbjct: 37  TTLNLTDTESTHNNKLITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITL 96

Query: 101 YVKLNRLPDATKLFDEM--PERNTISFVTTIQGYTVSSQFVEAVGLFSTLH-REGHELNP 157
           Y K N    A  +F  M   +R+ +S+ + I  +  +   ++AV +F  L  ++G   N 
Sbjct: 97  YSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNE 156

Query: 158 FAFTAFLKVLVSMGWAELCPCVFACVYKLGH-DSNAFVGTALIDAFSVCGC----VEFAR 212
           + FTA ++  +  G+ +   C+F  V K G+ DS+  VG  LID F V GC    +E AR
Sbjct: 157 YCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMF-VKGCSLADLESAR 215

Query: 213 KVFDGL-------------------FNDCFEEALNFFSQMR-AVGFKPNNFTFAFVLKAC 252
           KVFD +                   +ND   EA++ F +M  + G+ P+ FT   ++  C
Sbjct: 216 KVFDKMREKNVVTWTLMITRLAQYGYND---EAIDLFLEMLVSSGYVPDRFTLTGLISVC 272

Query: 253 LGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWS 312
             +  + + K  H   +++   +DL V  +L+D+Y K G +  AR++F+ M + +V+ W+
Sbjct: 273 AEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWT 332

Query: 313 FMIARYAQTD--LSIDAVELFCRMR-QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
            ++  Y +       +A+ +F  M  Q  VAPN FTF  VL+ACA++   D G Q+H   
Sbjct: 333 ALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQT 392

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAM 429
           +++GL +   V N L+ VYAK GRME++ + F    ++N V+   +    V+   +    
Sbjct: 393 IKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQ 452

Query: 430 IMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMY 489
            +  ++       +  TY+S+L   A +  +  G Q+H + VK  +  D+ V NALI MY
Sbjct: 453 DLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMY 512

Query: 490 AKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFV 549
           +KCG+   A  VF+ M D N ++W ++I+G++ HG +++ L++F  M + G +PN++T++
Sbjct: 513 SKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYI 572

Query: 550 GVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF 609
            VLSACS+ GL+++   +F SM  N+GI P +EHY  MV LLGR+G L +A + I  +PF
Sbjct: 573 AVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPF 632

Query: 610 QPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-- 667
               ++WR  LG+C +H N ++G  +A+ IL+ EP D AT++LLSN+YA    WE  A  
Sbjct: 633 DADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYILLSNLYATEGRWEDVAAI 692

Query: 668 ---------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDL 718
                    +KE G SWIE +  VH F  GDT H     I   L+ L +K +  GY+P+ 
Sbjct: 693 RKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKAQQIYEKLDELALKIKNVGYVPNT 752

Query: 719 SAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKI 778
             VL DV +++KE+YL+ HSEKLA+AFAL   P   PIR+ KNLR+C DCHTAIK IS +
Sbjct: 753 DFVLHDVEDEQKEQYLFQHSEKLAVAFALISTPNPKPIRVFKNLRVCGDCHTAIKYISMV 812

Query: 779 VQREIIIRDVHRFHHFQDGCCSCGDFW 805
             REI++RD +RFHH +DG CSC D+W
Sbjct: 813 SGREIVVRDANRFHHMKDGTCSCNDYW 839


>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Glycine max]
          Length = 820

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 277/780 (35%), Positives = 445/780 (57%), Gaps = 42/780 (5%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP--ER 120
           L++CI++ +L+    +H +++  G  LD    N L+ +Y K     +A  +F  M   +R
Sbjct: 46  LKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHKR 105

Query: 121 NTISFVTTIQGYTVSSQFVEAVGLFSTLH-----REGHELNPFAFTAFLKVLVSMGWAEL 175
           + +S+   I  +  +S  +E+  L + LH     R     N + FTA L+   +  +   
Sbjct: 106 DLVSWSAIISCFANNS--MESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTT 163

Query: 176 CPCVFACVYKLGH-DSNAFVGTALIDAFSVCGC-VEFARKVFDGLFND------------ 221
              +FA + K G+ DS+  VG ALID F+  G  ++ AR VFD + +             
Sbjct: 164 GLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRY 223

Query: 222 ----CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
                 ++A++ F ++    + P+ FT   +L AC+ L+   + K  H   +++    D+
Sbjct: 224 SQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDV 283

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
           +V   L+D+Y KS  + N+R+IF  M   +V+ W+ +I+ Y Q+    +A++LFC M   
Sbjct: 284 FVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHG 343

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            V PN FTF SVL+ACA++    +G Q+H   +++GL +   V N+L+++YA+ G ME +
Sbjct: 344 HVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECA 403

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ-VPATEVTYSSVLRACAS 456
            + F    ++N +++NT      +  +  ++   F+  +E   V A+  TY+ +L   A 
Sbjct: 404 RKAFNILFEKNLISYNTAADANAKALDSDES---FNHEVEHTGVGASPFTYACLLSGAAC 460

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           +  +  G Q+H L VK+ +  ++ + NALI MY+KCG+   A  VF+ M   N ++W ++
Sbjct: 461 IGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSI 520

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           ISG++ HG + + L++F  M + G +PN +T++ VLSACS+ GL+++   +F SM  N+ 
Sbjct: 521 ISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHS 580

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
           I P +EHY  MV LLGR+G L +A + I  +PF    ++WR  LG+C +H N ++G  +A
Sbjct: 581 ISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAA 640

Query: 637 QHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYF 685
           + IL+ EP D AT++LLSN+YA    W+  A+           KE G SWIE    VH F
Sbjct: 641 KKILEREPHDPATYILLSNLYASEGRWDDVAALRKSMKQKKLIKETGYSWIEVDNQVHKF 700

Query: 686 RAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAF 745
             GDTSH     I   L+ L +K +  GYIP+   VL DV +++KE+YL+ HSEK+A+A+
Sbjct: 701 HVGDTSHPQARKIYDELDELALKIKNLGYIPNTDFVLHDVEDEQKEQYLFQHSEKIAVAY 760

Query: 746 ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           AL   P   PIR+ KNLR+C DCHTAIK IS +  REI++RD +RFHH +DG CSC D+W
Sbjct: 761 ALISTPKPKPIRVFKNLRVCGDCHTAIKYISIVTGREIVVRDANRFHHIKDGKCSCNDYW 820



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 167/319 (52%), Gaps = 7/319 (2%)

Query: 246 AFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP- 304
           + +LKAC+    + + K  H   + +   +D  +  +L+ LY+K G+  NA  IF  M  
Sbjct: 43  SLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGH 102

Query: 305 -KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA---FVAPNQFTFVSVLQACATMEGLD 360
            K+D++ WS +I+ +A   +   A+  F  M Q     + PN++ F ++L++C+      
Sbjct: 103 HKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFT 162

Query: 361 LGNQIHSLVVRVGLL-SDVFVSNALMDVYAKCG-RMENSVELFAESPKRNHVTWNTMIVG 418
            G  I + +++ G   S V V  AL+D++ K G  ++++  +F +   +N VTW  MI  
Sbjct: 163 TGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITR 222

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           Y QLG +  A+ +F ++L  +    + T +S+L AC  L     G Q+H   +++    D
Sbjct: 223 YSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASD 282

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
           V V   L+DMYAK  ++ ++R +F+ M   N +SW A+ISGY       E +K+F  M  
Sbjct: 283 VFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLH 342

Query: 539 RGWRPNNLTFVGVLSACSN 557
               PN  TF  VL AC++
Sbjct: 343 GHVTPNCFTFSSVLKACAS 361



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 139/281 (49%), Gaps = 9/281 (3%)

Query: 349 VLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE--SPK 406
           +L+AC     L+LG  +H  ++  GL  D  + N+L+ +Y+KCG  EN++ +F      K
Sbjct: 45  LLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHK 104

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE---EQVPATEVTYSSVLRACASLAALEPG 463
           R+ V+W+ +I  +       +A++ F  ML+     +   E  ++++LR+C++      G
Sbjct: 105 RDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTG 164

Query: 464 MQVHCLTVKANY-DMDVVVANALIDMYAKCG-SITDARLVFDMMNDWNEVSWNAMISGYS 521
           + +    +K  Y D  V V  ALIDM+ K G  I  AR+VFD M   N V+W  MI+ YS
Sbjct: 165 LAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYS 224

Query: 522 MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
             GL  + + +F  +    + P+  T   +LSAC        G+    S V   G+   +
Sbjct: 225 QLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQ-LHSWVIRSGLASDV 283

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
               ++V +  ++  ++ + K+   +    +VM W AL+  
Sbjct: 284 FVGCTLVDMYAKSAAVENSRKIFNTM-LHHNVMSWTALISG 323



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 84/181 (46%), Gaps = 5/181 (2%)

Query: 445 VTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDM 504
           +  S +L+AC     LE G  +H   + +   +D V+ N+LI +Y+KCG   +A  +F  
Sbjct: 40  IKSSLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRN 99

Query: 505 MNDWNE--VSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR---PNNLTFVGVLSACSNGG 559
           M       VSW+A+IS ++ + + +  L  F  M Q       PN   F  +L +CSN  
Sbjct: 100 MGHHKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPL 159

Query: 560 LLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRAL 619
               G A F  ++     +  +    +++ +  + G   ++A+++       +++ W  +
Sbjct: 160 FFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLM 219

Query: 620 L 620
           +
Sbjct: 220 I 220


>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
 gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 926

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 279/782 (35%), Positives = 422/782 (53%), Gaps = 29/782 (3%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           S F+  +Y + LQ C +   ++    +   +   G  +D      L+ +YVK   L +  
Sbjct: 146 SNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGR 205

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
            +FD++ E     +   I  Y+ S  + E++ LF  +   G + N + F++ LK   ++ 
Sbjct: 206 MVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVA 265

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------------ 219
             E    V   + KLG +S   V  +LI  + V   V  A+K+FD L             
Sbjct: 266 RVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMIS 325

Query: 220 ----NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC-YE 274
               N   +  +  F +M   G   +  T   V  AC  + T+ + K  H  ++K    +
Sbjct: 326 GYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLD 385

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
            ++     LLD+Y+K G++++A R+FE M +K V+ W+ MI  Y +  LS  A++LF  M
Sbjct: 386 REVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEM 445

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
           +   V P+ +   S+L ACA    L  G  +H  +    L ++ FVSNAL D+YAKCG M
Sbjct: 446 KSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSM 505

Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
           +++ ++F+   K++ ++WNTMI GY +     +A+ +F++M  E  P    T + +L AC
Sbjct: 506 KDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRESKPDG-TTVACILPAC 564

Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
           ASLAAL+ G ++H   ++  Y  D  V NA++DMY KCG +  AR +FDM+ + + VSW 
Sbjct: 565 ASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWT 624

Query: 515 AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
            MI+GY MHG  +E +  F+ M+  G  P+ ++F+ +L ACS+ GLL++G   F  M   
Sbjct: 625 VMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKE 684

Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL 634
             IEP +EHY  MV LL R G+L KA K I+ +P +P   IW ALL  C IH++V++   
Sbjct: 685 CQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEK 744

Query: 635 SAQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVH 683
            A+ I + EPE+   +VLL+NIYA A  WE           +   K PG SWIE +G ++
Sbjct: 745 VAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKIN 804

Query: 684 YFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLAL 743
            F AGD S      I  +L+ L  K ++ GY P  +  L +  E EKE  L  HSEKLA+
Sbjct: 805 IFVAGDCSKPQAKKIELLLKRLRSKMKEEGYSPKTAYALLNADEREKEVALCGHSEKLAM 864

Query: 744 AFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGD 803
           AF +  +PP   IR+ KNLR+C DCH   K +SK   REII+RD  RFHHF+DG CSC  
Sbjct: 865 AFGMLNLPPGKTIRVTKNLRVCGDCHEMAKFMSKSASREIILRDSSRFHHFKDGSCSCRG 924

Query: 804 FW 805
           +W
Sbjct: 925 YW 926


>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g09950
 gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 995

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 309/816 (37%), Positives = 452/816 (55%), Gaps = 48/816 (5%)

Query: 29  SAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNC 88
           SA    S+ Q   S  T  TF        S  T+  S +   D++    I C + K G  
Sbjct: 189 SAFRIFSSMQYDGSRPTEYTFG-------SLVTTACS-LTEPDVRLLEQIMCTIQKSGLL 240

Query: 89  LDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTL 148
            DLF  + L++ + K   L  A K+F++M  RN ++    + G        EA  LF  +
Sbjct: 241 TDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM 300

Query: 149 HREGHELNPFAFTAFLKVLVSMGWAELCPC-----VFACVYKLGH-DSNAFVGTALIDAF 202
           +    +++P ++   L        AE         V   V   G  D    +G  L++ +
Sbjct: 301 NSM-IDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMY 359

Query: 203 SVCGCVEFARKVF---------------DGL-FNDCFEEALNFFSQMRAVGFKPNNFTFA 246
           + CG +  AR+VF                GL  N CF EA+  +  MR     P +FT  
Sbjct: 360 AKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLI 419

Query: 247 FVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK 306
             L +C  L   ++ +  HG +LK   ++++ V+ AL+ LY ++G ++  R+IF  MP+ 
Sbjct: 420 SSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEH 479

Query: 307 DVIPWSFMIARYAQTDLSI-DAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
           D + W+ +I   A+++ S+ +AV  F   ++A    N+ TF SVL A +++   +LG QI
Sbjct: 480 DQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQI 539

Query: 366 HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE-SPKRNHVTWNTMIVGYVQLGE 424
           H L ++  +  +    NAL+  Y KCG M+   ++F+  + +R++VTWN+MI GY+    
Sbjct: 540 HGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNEL 599

Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA 484
           + KA+ +   ML+         Y++VL A AS+A LE GM+VH  +V+A  + DVVV +A
Sbjct: 600 LAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSA 659

Query: 485 LIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR-P 543
           L+DMY+KCG +  A   F+ M   N  SWN+MISGY+ HG   E LK+F+ M+  G   P
Sbjct: 660 LVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPP 719

Query: 544 NNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKL 603
           +++TFVGVLSACS+ GLLE+G  +F+SM  +YG+ P IEH++ M  +LGRAG LDK    
Sbjct: 720 DHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDF 779

Query: 604 IEGIPFQPSVMIWRALLGACIIHNN--VEIGRLSAQHILDFEPEDEATHVLLSNIYAMAR 661
           IE +P +P+V+IWR +LGAC   N    E+G+ +A+ +   EPE+   +VLL N+YA   
Sbjct: 780 IEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGG 839

Query: 662 SWE---KA--------ASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSR 710
            WE   KA          KE G SW+  +  VH F AGD SH D ++I   L+ LN K R
Sbjct: 840 RWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMR 899

Query: 711 KAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSS-PIRIIKNLRICVDCH 769
            AGY+P     L D+ ++ KE  L  HSEKLA+AF L     S+ PIRI+KNLR+C DCH
Sbjct: 900 DAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCH 959

Query: 770 TAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +A K ISKI  R+II+RD +RFHHFQDG CSC DFW
Sbjct: 960 SAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 158/595 (26%), Positives = 284/595 (47%), Gaps = 33/595 (5%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           +QSC+ +     A   H ++ K     D++  N L+N Y++      A K+FDEMP RN 
Sbjct: 10  VQSCVGHRG--AARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNC 67

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC--PCVF 180
           +S+   + GY+ + +  EA+     + +EG   N +AF + L+    +G   +     + 
Sbjct: 68  VSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIH 127

Query: 181 ACVYKLGHDSNAFVGTALIDAFSVC-GCVEFARKVFDGL-------FNDCF--------- 223
             ++KL +  +A V   LI  +  C G V +A   F  +       +N            
Sbjct: 128 GLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQ 187

Query: 224 EEALNFFSQMRAVGFKPNNFTF-AFVLKAC-LGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
             A   FS M+  G +P  +TF + V  AC L    +R+ +       K+    DL+V  
Sbjct: 188 RSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGS 247

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF-VA 340
            L+  + KSG +S AR++F +M  ++ +  + ++    +     +A +LF  M     V+
Sbjct: 248 GLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVS 307

Query: 341 PNQFT-FVSVLQACATME--GLDLGNQIHSLVVRVGLLS-DVFVSNALMDVYAKCGRMEN 396
           P  +   +S     +  E  GL  G ++H  V+  GL+   V + N L+++YAKCG + +
Sbjct: 308 PESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIAD 367

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           +  +F     ++ V+WN+MI G  Q G   +A+  +  M    +     T  S L +CAS
Sbjct: 368 ARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCAS 427

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           L   + G Q+H  ++K   D++V V+NAL+ +YA+ G + + R +F  M + ++VSWN++
Sbjct: 428 LKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSI 487

Query: 517 ISGYSMHGLS-AEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG-EAYFKSMVAN 574
           I   +    S  E +  F   Q+ G + N +TF  VLSA S+    E G + +  ++  N
Sbjct: 488 IGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNN 547

Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNV 629
              E   E+  ++++  G+ G +D   K+   +  +   + W +++    IHN +
Sbjct: 548 IADEATTEN--ALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG-YIHNEL 599



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 161/326 (49%), Gaps = 20/326 (6%)

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
           +S +Q+C    G       HS + +  L  DV++ N L++ Y + G   ++ ++F E P 
Sbjct: 7   LSFVQSCVGHRGA--ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL 64

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP--GM 464
           RN V+W  ++ GY + GE  +A++    M++E + + +  + SVLRAC  + ++    G 
Sbjct: 65  RNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGR 124

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKC-GSITDARLVFDMMNDWNEVSWNAMISGYSMH 523
           Q+H L  K +Y +D VV+N LI MY KC GS+  A   F  +   N VSWN++IS YS  
Sbjct: 125 QIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQA 184

Query: 524 GLSAEVLKVFDLMQQRGWRPNNLTFVG-VLSACS----NGGLLEQGEAYFKSMVANYGIE 578
           G      ++F  MQ  G RP   TF   V +ACS    +  LLEQ        +   G+ 
Sbjct: 185 GDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQ----IMCTIQKSGLL 240

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL--SA 636
             +   + +VS   ++G L  A K+   +  + +V +   ++G        E  +L    
Sbjct: 241 TDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM 300

Query: 637 QHILDFEPEDEATHVLLSNI--YAMA 660
             ++D  PE     +LLS+   Y++A
Sbjct: 301 NSMIDVSPESYV--ILLSSFPEYSLA 324


>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
           [Vitis vinifera]
          Length = 785

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 283/789 (35%), Positives = 437/789 (55%), Gaps = 34/789 (4%)

Query: 46  PITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLN 105
           P+ F V     ++Y   L++CIQ+  L  A  IH   LK  +  D    + L  +Y+  N
Sbjct: 2   PLRFEVK----NNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCN 57

Query: 106 RLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLK 165
           ++  A +LFDE+P  + I +   I+ Y  +  F  A+ L+ ++   G   N + +   LK
Sbjct: 58  QVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLK 117

Query: 166 VLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG-------- 217
               +   E    + +     G +S+ FV TAL+D ++ CG +  A+++F          
Sbjct: 118 ACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVA 177

Query: 218 ---------LFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCA 268
                    L+  C ++A+    QM+  G  PN+ T   VL        +   K+ HG  
Sbjct: 178 WNAMIAGCSLYGLC-DDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYC 236

Query: 269 LKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAV 328
           ++  ++  + V   LLD+Y K   +  AR+IF+ M  ++ + WS MI  Y  +D   +A+
Sbjct: 237 VRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEAL 296

Query: 329 ELFCRM-RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDV 387
           ELF +M  +  + P   T  SVL+ACA +  L  G ++H  ++++G + D+ + N L+ +
Sbjct: 297 ELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSM 356

Query: 388 YAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTY 447
           YAKCG +++++  F E   ++ V+++ ++ G VQ G    A+ +F  M    +     T 
Sbjct: 357 YAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTM 416

Query: 448 SSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND 507
             VL AC+ LAAL+ G   H   +   +  D ++ NALIDMY+KCG I+ AR VF+ M+ 
Sbjct: 417 LGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDR 476

Query: 508 WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAY 567
            + VSWNAMI GY +HGL  E L +F  +   G +P+++TF+ +LS+CS+ GL+ +G  +
Sbjct: 477 HDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLW 536

Query: 568 FKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
           F +M  ++ I P +EH   MV +LGRAG +D+A   I  +PF+P V IW ALL AC IH 
Sbjct: 537 FDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHK 596

Query: 628 NVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWI 676
           N+E+G   ++ I    PE     VLLSNIY+ A  W+ AA            K PG SWI
Sbjct: 597 NIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWI 656

Query: 677 ENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWV 736
           E  G+VH F  GD SH  ++ I   LE L ++ ++ GY  + S V +DV E+EKE+ L  
Sbjct: 657 EINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLY 716

Query: 737 HSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQD 796
           HSEKLA+AF +  +    PI + KNLR+C DCHTAIK ++ I +REI +RD +RFHHF++
Sbjct: 717 HSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHTAIKFMTLITKREITVRDANRFHHFKN 776

Query: 797 GCCSCGDFW 805
           G C+CGDFW
Sbjct: 777 GTCNCGDFW 785


>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
 gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
          Length = 1067

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 293/761 (38%), Positives = 439/761 (57%), Gaps = 38/761 (4%)

Query: 81   QVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVE 140
            +V K G   DL+  + L++ + K   +  A  +F +M  RN +S    I G     +  E
Sbjct: 309  RVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEE 368

Query: 141  AVGLFSTLHREGHELNPFAF----TAFLKVLVSMGWAELCPCVFACVYKLGH-DSNAFVG 195
            AV LF  + ++  ELNP ++    TAF +  V          V A + + G  ++   +G
Sbjct: 369  AVELFMEM-KDSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIG 427

Query: 196  TALIDAFSVCGCVEFARKVF---------------DGL-FNDCFEEALNFFSQMRAVGFK 239
              LI+ ++ CG +  A  VF                GL  N  F EA+  F +MR     
Sbjct: 428  NGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELY 487

Query: 240  PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
            P+NFT    L +C  L  I V +  H   LK   ++D+ V+ ALL LY + G +   ++ 
Sbjct: 488  PSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKA 547

Query: 300  FEEMPKKDVIPWSFMIARYAQTDLS-IDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
            F  M   D + W+ +I   A ++ S ++AVE F  M +A   PN+ TF+++L A +++  
Sbjct: 548  FSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSL 607

Query: 359  LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE-SPKRNHVTWNTMIV 417
             +LG QIH+LV++  + +D  + NAL+  Y KCG M     +F+  S +++ V+WN+MI 
Sbjct: 608  HELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMIS 667

Query: 418  GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM 477
            GY+    + KAM M   M+++       T+++VL ACA++A LE GM+VH  +V+A  + 
Sbjct: 668  GYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLES 727

Query: 478  DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQ 537
            D+V+ +AL+DMYAKCG I  A   F+MM   N  SWN+MISGY+ HG   + L +F  M+
Sbjct: 728  DIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMK 787

Query: 538  QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHL 597
             +G  P+++TFVGVLSACS+ GL+ +G ++F SM   YG+ P +EH++ MV LLGR G L
Sbjct: 788  LQGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGEL 847

Query: 598  DKAAKLIEGIPFQPSVMIWRALLGACIIHN--NVEIGRLSAQHILDFEPEDEATHVLLSN 655
            +K    +  +P +P+V+IWR +LGAC   N  N  +GR +A+ +L+ EP +   ++LLSN
Sbjct: 848  NKMEDFLNQMPVKPNVLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAVNYILLSN 907

Query: 656  IYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEW 704
            +YA    W+  A            KE G SW+  +  VH F AGD SH + ++I   L+ 
Sbjct: 908  MYASGGKWDDVAKTRVAMRKAFVKKEAGCSWVTMKDGVHVFVAGDKSHPEKDLIYEKLKE 967

Query: 705  LNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRI 764
            LN K R AGYIP+    L D+  + KE  L  HSEK+A+AF L + P   PIRI+KNLR+
Sbjct: 968  LNGKMRLAGYIPETRFALYDLEGESKEELLSYHSEKIAVAFVLTR-PSKMPIRILKNLRV 1026

Query: 765  CVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            C DCH+A K IS+IV+R+I++RD +RFHHF++G CSCGDFW
Sbjct: 1027 CGDCHSAFKYISQIVERQIVLRDSNRFHHFENGKCSCGDFW 1067



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 167/596 (28%), Positives = 294/596 (49%), Gaps = 50/596 (8%)

Query: 73  QTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGY 132
           + A  +H Q+ K G   DLF  N L+N+Y ++  L    K+FDEMP RN +S+   I GY
Sbjct: 90  KDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGY 149

Query: 133 TVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAEL--CPCVFACVYKLGHDS 190
           T +    EA  LF  +  +G   N +AF + ++     G   L     +   + K  + +
Sbjct: 150 TRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVN 209

Query: 191 NAFVGTALIDAF-SVCGCVEFARKVFDGLF-------NDCFE---------EALNFFSQM 233
           +      LI  + +  G V++AR+ FD ++       N              A + FS M
Sbjct: 210 DVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTM 269

Query: 234 R----AVGFKPNNFTFAFVLKACLGLDT----------IRVAKSAHGCALKTCYEMDLYV 279
           +      G KPN +TF  ++ A   L             RV KS         +  DLYV
Sbjct: 270 QKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSG--------FLHDLYV 321

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF- 338
             AL+  + K+G I  A+ IF++M  ++V+  + +I    +     +AVELF  M+ +  
Sbjct: 322 GSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVE 381

Query: 339 VAPNQFTFV-SVLQACATME-GLDLGNQIHSLVVRVGLL-SDVFVSNALMDVYAKCGRME 395
           + PN +  + +       +E G   G+++H+ ++R GLL + + + N L+++YAKCG + 
Sbjct: 382 LNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAIN 441

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
           ++  +F     ++ VTWN+MI G  Q  +  +A+  F +M   ++  +  T  S L +CA
Sbjct: 442 DACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCA 501

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
           SL  +  G Q+HC  +K   D+DV V+NAL+ +Y +CG + + +  F +M D++ VSWN+
Sbjct: 502 SLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNS 561

Query: 516 MISGYSMHGLSA-EVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA- 573
           +I   +    S  E ++ F +M + GW PN +TF+ +L+A S+  L E G+     ++  
Sbjct: 562 LIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKR 621

Query: 574 NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNV 629
           N   +  IE+  ++++  G+ G +     +   +  +   + W +++    IHN +
Sbjct: 622 NVAADTAIEN--ALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISG-YIHNEL 674



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 170/612 (27%), Positives = 303/612 (49%), Gaps = 47/612 (7%)

Query: 55  NSHSYATSLQSCIQNDD--LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVK-LNRLPDAT 111
           N +++ + +++C +  +  L+  M IH  + K     D+ A+NVL+++Y   L  +  A 
Sbjct: 173 NHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYAR 232

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHRE----GHELNPFAFTAFLKVL 167
           + FD +  RN +S  + I  Y      V A  +FST+ +E    G + N + F + +   
Sbjct: 233 RAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISAT 292

Query: 168 VSMGWAELC--PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF---------- 215
            S+  + L     +   V K G   + +VG+AL+  F+  G + +A+ +F          
Sbjct: 293 CSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVS 352

Query: 216 -DGLF-----NDCFEEALNFFSQMR-AVGFKPNNFTFAFVLKACLGLDTI----RVAKSA 264
            +GL          EEA+  F +M+ +V   PN  ++  +L A      +    R     
Sbjct: 353 LNGLIIGLVRQKRGEEAVELFMEMKDSVELNPN--SYMIILTAFPEFHVLENGKRKGSEV 410

Query: 265 HGCALKT-CYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDL 323
           H   +++      + +   L+++Y K G I++A  +F  M  KD + W+ MI    Q   
Sbjct: 411 HAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQ 470

Query: 324 SIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNA 383
            ++AV+ F  MR+  + P+ FT +S L +CA++  + +G Q+H   +++GL  DV VSNA
Sbjct: 471 FLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNA 530

Query: 384 LMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVG--KAMIMFSKMLEEQVP 441
           L+ +Y +CG ++   + F+     +HV+WN++I G +   E    +A+  F  M+     
Sbjct: 531 LLALYGECGYVKECQKAFSLMLDYDHVSWNSLI-GALADSEPSMLEAVESFLVMMRAGWD 589

Query: 442 ATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLV 501
              VT+ ++L A +SL+  E G Q+H L +K N   D  + NAL+  Y KCG +     +
Sbjct: 590 PNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENI 649

Query: 502 FDMMND-WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGL 560
           F  M+D  +EVSWN+MISGY  + L  + + +   M Q+G R +  TF  VLSAC+    
Sbjct: 650 FSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVAT 709

Query: 561 LEQGEAYFKSMVANYGIEPCIEH----YTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIW 616
           LE+G       V    +  C+E      +++V +  + G +D A++  E +P + ++  W
Sbjct: 710 LERGME-----VHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPAR-NLYSW 763

Query: 617 RALLGACIIHNN 628
            +++     H +
Sbjct: 764 NSMISGYARHGH 775



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 185/408 (45%), Gaps = 21/408 (5%)

Query: 61  TSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPER 120
           ++L SC     +     +HC+ LK G  LD+  +N LL +Y +   + +  K F  M + 
Sbjct: 495 SALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDY 554

Query: 121 NTISFVTTIQGYTVSS-QFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCV 179
           + +S+ + I     S    +EAV  F  + R G + N   F   L  + S+   EL   +
Sbjct: 555 DHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQI 614

Query: 180 FACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-----------------FNDC 222
            A V K    ++  +  AL+  +  CG + +   +F  +                  N+ 
Sbjct: 615 HALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNEL 674

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
             +A++    M   G + + FTFA VL AC  + T+      HGC+++ C E D+ +  A
Sbjct: 675 LPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSA 734

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+D+Y K G I  A R FE MP +++  W+ MI+ YA+      +++LF +M+     P+
Sbjct: 735 LVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPD 794

Query: 343 QFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
             TFV VL AC+    ++ G +   S+    GL   +   + ++D+  + G +    +  
Sbjct: 795 HVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFL 854

Query: 402 AESP-KRNHVTWNTMIVGYVQLGEVGKAM-IMFSKMLEEQVPATEVTY 447
            + P K N + W T++    +      A+    ++ML E  P   V Y
Sbjct: 855 NQMPVKPNVLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAVNY 902


>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Glycine max]
          Length = 815

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 281/779 (36%), Positives = 427/779 (54%), Gaps = 32/779 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N+  +   +Q+ +Q  DL  A  +  ++  K    ++ +TN ++  Y+K   L  A  LF
Sbjct: 41  NTCRFNFQVQTHLQRGDLGAARKLFDEMPHK----NVISTNTMIMGYLKSGNLSTARSLF 96

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D M +R+ +++   I GY   ++F+EA  LF+ + R G   +       L          
Sbjct: 97  DSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTEFESVN 156

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF---- 223
               V   V K+G+DS   V  +L+D++     +  A  +F  +       FN       
Sbjct: 157 EVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYS 216

Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                 +A+N F +M+ +GF+P+ FTFA VL A + +D I   +  H   +K  +  +++
Sbjct: 217 KEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVF 276

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           VA ALLD Y+K   I  AR++F EMP+ D I ++ +I   A      +++ELF  ++   
Sbjct: 277 VANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTR 336

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
               QF F ++L   A    L++G QIHS  +    +S+V V N+L+D+YAKC +   + 
Sbjct: 337 FDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEAN 396

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            +FA+   ++ V W  +I GYVQ G     + +F +M   ++ A   TY+S+LRACA+LA
Sbjct: 397 RIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLA 456

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           +L  G Q+H   +++    +V   +AL+DMYAKCGSI +A  +F  M   N VSWNA+IS
Sbjct: 457 SLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALIS 516

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
            Y+ +G     L+ F+ M   G +PN+++F+ +L ACS+ GL+E+G  YF SM   Y +E
Sbjct: 517 AYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLE 576

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P  EHY SMV +L R+G  D+A KL+  +PF+P  ++W ++L +C IH N E+   +A  
Sbjct: 577 PRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQ 636

Query: 639 ILDFEP-EDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFR 686
           + + +   D A +V +SNIYA A  W           E+   K P  SW+E +   H F 
Sbjct: 637 LFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRERGIRKVPAYSWVEIKQKTHVFS 696

Query: 687 AGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFA 746
           A DTSH     I   L+ L  +  + GY PD +  L +V E+ K   L  HSE++A+AFA
Sbjct: 697 ANDTSHPQTKEITRKLDELEKQMEEQGYKPDSTCALHNVDEEVKVESLKYHSERIAIAFA 756

Query: 747 LFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           L   P  SPI ++KNLR C DCH AIK+ISKIV REI +RD  RFHHF DG CSC D+W
Sbjct: 757 LISTPKGSPILVMKNLRACNDCHAAIKVISKIVNREITVRDSSRFHHFTDGSCSCKDYW 815



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 104/222 (46%), Gaps = 31/222 (13%)

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
            + + +++ G   +    N  +  + + G +  + +LF E P +N ++ NTMI+GY++ G
Sbjct: 28  HVDASMIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKSG 87

Query: 424 EVGKAMIMFSKMLEEQVPA-------------------------------TEVTYSSVLR 452
            +  A  +F  M++  V                                   +T +++L 
Sbjct: 88  NLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLS 147

Query: 453 ACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS 512
                 ++    QVH   VK  YD  ++V N+L+D Y K  S+  A  +F  M + + V+
Sbjct: 148 GFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVT 207

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSA 554
           +NA+++GYS  G + + + +F  MQ  G+RP+  TF  VL+A
Sbjct: 208 FNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTA 249


>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 265/660 (40%), Positives = 389/660 (58%), Gaps = 28/660 (4%)

Query: 174  ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-----------GLFNDC 222
            EL   V     K G DS+  V  +L++ +S  GC  FAR+VF+            + + C
Sbjct: 921  ELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSC 980

Query: 223  F-----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGL-DTIRVAKSAHGCALKTCYEMD 276
                  EE++N F  +   G KP++FT A VL+AC  L D + +++  H  ALKT    D
Sbjct: 981  AQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIAD 1040

Query: 277  LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
             +VA  L+D+Y+KSG++  A  +F+     D+  W+ M+  Y   +    A+ELF  + +
Sbjct: 1041 SFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHK 1100

Query: 337  AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
            +    +Q T  +  +AC  +  LD G QIH+  ++ G  SD+ V++ ++D+Y KCG M N
Sbjct: 1101 SGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVN 1160

Query: 397  SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
            +  +F      + V W +MI G V  G   +A+ ++ +M + +V   E T++++++A + 
Sbjct: 1161 AGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSC 1220

Query: 457  LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
            + ALE G Q+H   +K +   D  V  +L+DMYAKCG+I DA  +F  MN  N   WNAM
Sbjct: 1221 VTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAM 1280

Query: 517  ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
            + G + HG + E + +F  M+  G  P+ ++F+G+LSACS+ GL  +   Y  SM  +YG
Sbjct: 1281 LVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYG 1340

Query: 577  IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
            IEP IEHY+ +V  LGRAG + +A K+IE +PF+ S  I RALLGAC I  +VE G+  A
Sbjct: 1341 IEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVA 1400

Query: 637  QHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYF 685
              +   EP D A +VLLSNIYA A  W+           K   K+PG SWI+ + M+H F
Sbjct: 1401 ARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLF 1460

Query: 686  RAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAF 745
               D SH   +II   +E +    R+ GY+PD   VL DV ++EKER L+ HSEKLA+A+
Sbjct: 1461 VVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAY 1520

Query: 746  ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
             L   P S+ IR+IKNLR+C DCH AIK ISK+ +REI++RD +RFHHF+DG CSCGD+W
Sbjct: 1521 GLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 1580



 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 175/578 (30%), Positives = 299/578 (51%), Gaps = 24/578 (4%)

Query: 60   ATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPE 119
            A  L+ C+ +  L  A  +H   +K G   D+F +  L+N+Y K  R+ DA  LFD M E
Sbjct: 731  APVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRE 790

Query: 120  RNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE---LC 176
            R+ + +   ++GY       EA  LFS  HR G   + F+    L  +  + W E   L 
Sbjct: 791  RDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKWLA 850

Query: 177  PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAV 236
              V A   KL          +L D      C  + +K+ + L+      A+  F  M  +
Sbjct: 851  DQVQAYAAKL----------SLSDDNPDVFC--WNKKLSECLWAGDNWGAIECFVNMNGL 898

Query: 237  GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNA 296
                +  T   VL A  G D + + K  HG A+K+  + D+ VA +L+++Y+K G    A
Sbjct: 899  NIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFA 958

Query: 297  RRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM 356
            R +F +M   D+I W+ MI+  AQ+ L  ++V LF  +    + P+ FT  SVL+AC+++
Sbjct: 959  REVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSL 1018

Query: 357  -EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTM 415
             +GL++  QIH   ++ G ++D FV+  L+DVY+K G+ME +  LF      +   WN M
Sbjct: 1019 IDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAM 1078

Query: 416  IVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY 475
            + GY+   +  KA+ +FS + +    + ++T ++  +AC  L  L+ G Q+H   +KA +
Sbjct: 1079 MFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGF 1138

Query: 476  DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDL 535
            D D+ V + ++DMY KCG + +A +VF+ ++  ++V+W +MISG   +G   + L+++  
Sbjct: 1139 DSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHR 1198

Query: 536  MQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY---TSMVSLLG 592
            M+Q    P+  TF  ++ A S    LEQG    + + AN     C+      TS+V +  
Sbjct: 1199 MRQSRVMPDEYTFATLIKASSCVTALEQG----RQLHANVIKLDCVSDPFVGTSLVDMYA 1254

Query: 593  RAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
            + G+++ A +L + +  + ++ +W A+L     H N E
Sbjct: 1255 KCGNIEDAYRLFKKMNVR-NIALWNAMLVGLAQHGNAE 1291



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 130/461 (28%), Positives = 227/461 (49%), Gaps = 18/461 (3%)

Query: 63   LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
            L +    DDL+    +H   +K G   D+   N L+N+Y K+     A ++F++M   + 
Sbjct: 911  LAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDL 970

Query: 123  ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSM-GWAELCPCVFA 181
            IS+ + I     SS   E+V LF  L  EG + + F   + L+   S+     +   +  
Sbjct: 971  ISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHV 1030

Query: 182  CVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF---DGLFNDCF-------------EE 225
               K G+ +++FV T LID +S  G +E A  +F   D L   C+             ++
Sbjct: 1031 HALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKK 1090

Query: 226  ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
            AL  FS +   G K +  T A   KAC  L  +   K  H  A+K  ++ DL+V   +LD
Sbjct: 1091 ALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILD 1150

Query: 286  LYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFT 345
            +Y K G++ NA  +F  +   D + W+ MI+          A+ ++ RMRQ+ V P+++T
Sbjct: 1151 MYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYT 1210

Query: 346  FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
            F ++++A + +  L+ G Q+H+ V+++  +SD FV  +L+D+YAKCG +E++  LF +  
Sbjct: 1211 FATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMN 1270

Query: 406  KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
             RN   WN M+VG  Q G   +A+ +F  M    +    V++  +L AC+         +
Sbjct: 1271 VRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYE 1330

Query: 466  -VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMM 505
             +H +      + ++   + L+D   + G + +A  V + M
Sbjct: 1331 YLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETM 1371



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 145/588 (24%), Positives = 256/588 (43%), Gaps = 49/588 (8%)

Query: 63   LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
            L++ I   +L      H +++  G+  D F +N LL +Y K   L  A ++FD  PER+ 
Sbjct: 628  LRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDL 687

Query: 123  ISFVTTIQGYTVS-----SQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
            +++   +  Y  S         E + LF  L               LK+ ++ G      
Sbjct: 688  VTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAE 747

Query: 178  CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GLFNDC 222
             V     K+G + + FV  AL++ +S CG +  AR +FD               G     
Sbjct: 748  GVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLG 807

Query: 223  FE-EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
             E EA   FS+    G +P+ F+   +L    G+  +   +          Y   L ++ 
Sbjct: 808  LEKEAFQLFSEFHRSGLRPDEFSVQLILN---GVSEVNWDEGKWLADQVQAYAAKLSLS- 863

Query: 282  ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
                               ++ P  DV  W+  ++       +  A+E F  M    +  
Sbjct: 864  -------------------DDNP--DVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDY 902

Query: 342  NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
            +  T + VL A A  + L+LG Q+H + V+ GL SDV V+N+L+++Y+K G    + E+F
Sbjct: 903  DAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVF 962

Query: 402  AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL-AAL 460
             +    + ++WN+MI    Q     +++ +F  +L E +     T +SVLRAC+SL   L
Sbjct: 963  NDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGL 1022

Query: 461  EPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY 520
                Q+H   +K     D  VA  LID+Y+K G + +A  +F   +D +   WNAM+ GY
Sbjct: 1023 NISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGY 1082

Query: 521  SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPC 580
             +     + L++F L+ + G + + +T      AC    LL+QG+      +   G +  
Sbjct: 1083 IIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAI-KAGFDSD 1141

Query: 581  IEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
            +   + ++ +  + G +  A  +   I   P  + W +++  C+ + N
Sbjct: 1142 LHVNSGILDMYIKCGDMVNAGIVFNYIS-APDDVAWTSMISGCVDNGN 1188



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 133/492 (27%), Positives = 225/492 (45%), Gaps = 57/492 (11%)

Query: 163  FLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD------ 216
             L+  +S     L  C  A +   G   + F+   L+  +S CG +  AR+VFD      
Sbjct: 627  LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686

Query: 217  --------GLF------NDC-FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVA 261
                    G +      ND   +E L+ F  +RA        T A VLK CL    +  A
Sbjct: 687  LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 746

Query: 262  KSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQT 321
            +  HG A+K   E D++V+ AL+++Y+K G + +AR +F+ M ++DV+ W+ M+  Y Q 
Sbjct: 747  EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 806

Query: 322  DLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM---EGLDLGNQIHSLVVRVGLLSDV 378
             L  +A +LF    ++ + P++F+   +L   + +   EG  L +Q+ +   ++ L  D 
Sbjct: 807  GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSDDN 866

Query: 379  FVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE 438
                   DV+                       WN  +   +  G+   A+  F  M   
Sbjct: 867  ------PDVFC----------------------WNKKLSECLWAGDNWGAIECFVNMNGL 898

Query: 439  QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDA 498
             +    VT   VL A A    LE G QVH + VK+  D DV VAN+L++MY+K G    A
Sbjct: 899  NIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFA 958

Query: 499  RLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSN- 557
            R VF+ M   + +SWN+MIS  +   L  E + +F  +   G +P++ T   VL ACS+ 
Sbjct: 959  REVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSL 1018

Query: 558  -GGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIW 616
              GL    + +  ++      +  +   T+++ +  ++G +++A  L +       +  W
Sbjct: 1019 IDGLNISRQIHVHALKTGNIADSFVA--TTLIDVYSKSGKMEEAEFLFQNKD-DLDLACW 1075

Query: 617  RALLGACIIHNN 628
             A++   II N+
Sbjct: 1076 NAMMFGYIIGND 1087


>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
 gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 258/571 (45%), Positives = 357/571 (62%), Gaps = 14/571 (2%)

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
           +LK C  L+ +   K  H   L + +  DL +   LL+LY K G++  AR++F+EM  +D
Sbjct: 21  LLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRD 80

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL--GNQI 365
           V+ W+ +I  Y+Q D   DA+ L   M +  + PNQFT  S+L+A + +   D+  G Q+
Sbjct: 81  VVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQL 140

Query: 366 HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEV 425
           H L +R G  S+V+VS A++D+YA+C  +E +  +F     +N V+WN +I GY + G+ 
Sbjct: 141 HGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQG 200

Query: 426 GKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANAL 485
            KA  +FS ML E V  T  TYSSVL ACAS+ +LE G  VH L +K    +   V N L
Sbjct: 201 DKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTL 260

Query: 486 IDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNN 545
           +DMYAK GSI DA+ VFD +   + VSWN+M++GYS HGL    L+ F+ M +    PN+
Sbjct: 261 LDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPND 320

Query: 546 LTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
           +TF+ VL+ACS+ GLL++G  YF  M+  Y +EP I HY +MV LLGRAGHLD+A + I 
Sbjct: 321 ITFLCVLTACSHAGLLDEGRHYF-DMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFIS 379

Query: 606 GIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEK 665
            +P +P+  +W ALLGAC +H N+E+G  +A+ I + +     THVLL NIYA+A  W  
Sbjct: 380 EMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWND 439

Query: 666 AA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGY 714
           AA            KEP  SW+E +  VH F A D +H     I  M E ++ K ++ GY
Sbjct: 440 AAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDKIKEIGY 499

Query: 715 IPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKI 774
           +PD S VL  + + E+E  L  HSEKLALAFAL   PP S IRI KN+RIC DCH+A K 
Sbjct: 500 VPDSSHVLLCMDQQEREAKLQYHSEKLALAFALLNTPPGSTIRIKKNIRICGDCHSAFKF 559

Query: 775 ISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +SK+V+REII+RD +RFHHF DG CSC D+W
Sbjct: 560 VSKLVEREIIVRDTNRFHHFCDGACSCEDYW 590



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 181/375 (48%), Gaps = 19/375 (5%)

Query: 61  TSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPER 120
           T L+ C   + L     IH  +L      DL   N LLN+Y K   L  A KLFDEM  R
Sbjct: 20  TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79

Query: 121 NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC-- 178
           + +++   I GY+   +  +A+ L   + R G + N F   + LK    +G  ++     
Sbjct: 80  DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQ 139

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDC---------------- 222
           +     + G+DSN +V  A++D ++ C  +E A+ +FD + +                  
Sbjct: 140 LHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQ 199

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
            ++A   FS M     KP +FT++ VL AC  + ++   K  H   +K   ++  +V   
Sbjct: 200 GDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNT 259

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           LLD+Y KSG I +A+++F+ + K+DV+ W+ M+  Y+Q  L   A++ F  M +  +APN
Sbjct: 260 LLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPN 319

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
             TF+ VL AC+    LD G     ++ +  +   +     ++D+  + G ++ +++  +
Sbjct: 320 DITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFIS 379

Query: 403 ESP-KRNHVTWNTMI 416
           E P K     W  ++
Sbjct: 380 EMPIKPTAAVWGALL 394



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 167/292 (57%), Gaps = 7/292 (2%)

Query: 348 SVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKR 407
           ++L+ C  +  L+ G  IH+L++      D+ + N L+++YAKCG +  + +LF E   R
Sbjct: 20  TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79

Query: 408 NHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE--PGMQ 465
           + VTW  +I GY Q      A+++  +ML   +   + T +S+L+A + + + +   G Q
Sbjct: 80  DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQ 139

Query: 466 VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGL 525
           +H L ++  YD +V V+ A++DMYA+C  + +A+L+FD+M   NEVSWNA+I+GY+  G 
Sbjct: 140 LHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQ 199

Query: 526 SAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYT 585
             +   +F  M +   +P + T+  VL AC++ G LEQG+ +  +++  +G +       
Sbjct: 200 GDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGK-WVHALMIKWGEKLVAFVGN 258

Query: 586 SMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQ 637
           +++ +  ++G ++ A K+ + +  +  V+ W ++L     H    +G+++ Q
Sbjct: 259 TLLDMYAKSGSIEDAKKVFDRLA-KRDVVSWNSMLTGYSQHG---LGKVALQ 306



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 99/196 (50%), Gaps = 5/196 (2%)

Query: 429 MIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDM 488
           M +  +  +    A E+ ++ +L+ C  L  L  G  +H L + + +  D+V+ N L+++
Sbjct: 1   MELIRQQCKNNAGAREICHT-LLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNL 59

Query: 489 YAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTF 548
           YAKCG +  AR +FD M+  + V+W A+I+GYS H    + L +   M + G +PN  T 
Sbjct: 60  YAKCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTL 119

Query: 549 VGVLSACSNGGLLE--QGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEG 606
             +L A S  G  +  QG      +   YG +  +    +++ +  R  HL++ A+LI  
Sbjct: 120 ASLLKAASGVGSTDVLQGRQ-LHGLCLRYGYDSNVYVSCAILDMYARCHHLEE-AQLIFD 177

Query: 607 IPFQPSVMIWRALLGA 622
           +    + + W AL+  
Sbjct: 178 VMVSKNEVSWNALIAG 193



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 54/254 (21%), Positives = 102/254 (40%), Gaps = 25/254 (9%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +Y++ L +C     L+    +H  ++K G  L  F  N LL++Y K   + DA K+FD +
Sbjct: 221 TYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRL 280

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
            +R+ +S+ + + GY+       A+  F  + R     N   F   L      G  +   
Sbjct: 281 AKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGR 340

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVG 237
             F  + K   +        ++D     G +               + A+ F S+M    
Sbjct: 341 HYFDMMKKYNVEPQISHYVTMVDLLGRAGHL---------------DRAIQFISEM---P 382

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY---VAVALLDLYTKSGEIS 294
            KP    +  +L AC     + +     G A +  +E+D +     V L ++Y  +G  +
Sbjct: 383 IKPTAAVWGALLGACRMHKNMELG----GYAAECIFELDSHYPGTHVLLYNIYALAGRWN 438

Query: 295 NARRIFEEMPKKDV 308
           +A ++ + M +  V
Sbjct: 439 DAAKVRKMMKESGV 452


>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 294/839 (35%), Positives = 447/839 (53%), Gaps = 57/839 (6%)

Query: 23  AWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQV 82
           +W+  L ++   +  + + ST   +T S +  ++ ++   L++     DL+T   IH   
Sbjct: 59  SWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAA 118

Query: 83  LKKG-NCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEA 141
           +K G     +   N L+N+Y K   + D  K+FD + +R+ +S+ + I       ++ +A
Sbjct: 119 VKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQA 178

Query: 142 VGLFSTLHREGHELNPFAFTAFLKVLVSMG---WAELCPCVFACVYKLGHDSNAFVGTAL 198
           +  F  +  E  EL+ F   +      ++G      L   +     ++G D   F   AL
Sbjct: 179 LEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTFTNNAL 237

Query: 199 IDAFSVCGCVEFARKVFDGLFN----------------DCFEEALNFFSQMRAVGFKPNN 242
           +  ++  G V+ ++ +F+   +                D F EAL FF  M   G + + 
Sbjct: 238 MAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDG 297

Query: 243 FTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD-LYVAVALLDLYTKSGEISNARRIFE 301
            T A VL AC  L+ + V K  H   L+    ++  +V  AL+D+Y    ++ + RR+F+
Sbjct: 298 VTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFD 357

Query: 302 EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQACATMEGLD 360
            +  + +  W+ MI+ YA+  L   A+ LF  M + A + PN  T  SV+ AC   E   
Sbjct: 358 HILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFS 417

Query: 361 LGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYV 420
               IH   V++G   D +V NALMD+Y++ G+M+ S  +F     R+ V+WNTMI GYV
Sbjct: 418 NKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYV 477

Query: 421 QLGEVGKAMIMFSKMLEEQ-----------------VPATEVTYSSVLRACASLAALEPG 463
             G    A+++  +M   +                      +T  +VL  CA+LAA+  G
Sbjct: 478 LSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKG 537

Query: 464 MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMH 523
            ++H   ++     D+ V +AL+DMYAKCG +  +R VF+ M + N ++WN +I    MH
Sbjct: 538 KEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMH 597

Query: 524 GLSAEVLKVFDLMQQRGWR-----PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           G   E L++F  M     R     PN +TF+ V +ACS+ GL+ +G   F  M  ++G+E
Sbjct: 598 GKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVE 657

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQ-PSVMIWRALLGACIIHNNVEIGRLSAQ 637
           P  +HY  +V LLGRAG L++A +L+  +P +   V  W +LLGAC IH NVE+G ++A+
Sbjct: 658 PTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAK 717

Query: 638 HILDFEPEDEATHVLLSNIYAMARSWEKA-----------ASKEPGLSWIENQGMVHYFR 686
           ++L  EP   + +VLLSNIY+ A  W KA             KEPG SWIE +  VH F 
Sbjct: 718 NLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFM 777

Query: 687 AGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFA 746
           AGD SH     + G LE L+ K RK GY+PD S VL +V EDEKE  L  HSEKLA+AF 
Sbjct: 778 AGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFG 837

Query: 747 LFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +   PP + IR+ KNLR+C DCH A K ISKI++REII+RDV RFHHF++G CSCGD+W
Sbjct: 838 ILNTPPGTTIRVAKNLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 896



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 154/553 (27%), Positives = 269/553 (48%), Gaps = 44/553 (7%)

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
           P R+T S+V  ++  T S+ F EA+  +  +   G   + FAF A LK +  +   +   
Sbjct: 53  PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112

Query: 178 CVFACVYKLGHDSNAF-VGTALIDAFSVCGCVEFARKVFDGLFN---------------- 220
            + A   K G+ S++  V   L++ +  CG +    KVFD + +                
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRF 172

Query: 221 DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDT---IRVAKSAHGCALKTCYEMDL 277
           + +E+AL  F  M+    + ++FT   V  AC  L     +R+ K  HG +L+   +   
Sbjct: 173 EKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKT 231

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
           +   AL+ +Y K G + +++ +FE    +D++ W+ MI+ ++Q+D   +A+  F  M   
Sbjct: 232 FTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLE 291

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG-LLSDVFVSNALMDVYAKCGRMEN 396
            V  +  T  SVL AC+ +E LD+G +IH+ V+R   L+ + FV +AL+D+Y  C ++E+
Sbjct: 292 GVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVES 351

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ--VPATEVTYSSVLRAC 454
              +F     R    WN MI GY + G   KA+I+F +M++    +P T  T +SV+ AC
Sbjct: 352 GRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNT-TTMASVMPAC 410

Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
               A      +H   VK  +  D  V NAL+DMY++ G +  +  +FD M   + VSWN
Sbjct: 411 VHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWN 470

Query: 515 AMISGYSMHGLSAEVLKVFDLMQQR-----------------GWRPNNLTFVGVLSACSN 557
            MI+GY + G  +  L +   MQ+                   ++PN +T + VL  C+ 
Sbjct: 471 TMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAA 530

Query: 558 GGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWR 617
              + +G+      + N  +   I   +++V +  + G L+ + ++   +P   +V+ W 
Sbjct: 531 LAAIAKGKEIHAYAIRNM-LASDITVGSALVDMYAKCGCLNLSRRVFNEMP-NKNVITWN 588

Query: 618 ALLGACIIHNNVE 630
            L+ AC +H   E
Sbjct: 589 VLIMACGMHGKGE 601



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 1/159 (0%)

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
           SP R+  +W   +    +  +  +A+  + +M           + +VL+A + L  L+ G
Sbjct: 52  SPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTG 111

Query: 464 MQVHCLTVKANY-DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
            Q+H   VK  Y    V VAN L++MY KCG I D   VFD + D ++VSWN+ I+    
Sbjct: 112 EQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCR 171

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLL 561
                + L+ F  MQ      ++ T V V  ACSN G++
Sbjct: 172 FEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVM 210


>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g13770, mitochondrial-like [Vitis vinifera]
          Length = 1053

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 250/571 (43%), Positives = 365/571 (63%), Gaps = 13/571 (2%)

Query: 248  VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
            VL  C+    IR  +  H   +KTCYE  +Y+   L+ LY K   + +ARR+ +EMP+++
Sbjct: 483  VLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERN 542

Query: 308  VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
            V+ W+ MI+ Y+Q   + +A+ LF  M  +  APN+FTF +VL +C +  G  LG QIHS
Sbjct: 543  VVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHS 602

Query: 368  LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK 427
            LV++    S +FV ++L+D+YAK G++  +  +F   P+R+ V+   +I GY QLG   +
Sbjct: 603  LVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEE 662

Query: 428  AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALID 487
            A+ +F ++  E + +  VTY+SVL A + LAAL+ G QVH   ++A     VV+ N+LID
Sbjct: 663  ALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLID 722

Query: 488  MYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW-RPNNL 546
            MY+KCGS+T +R +FD M +   +SWNAM+ GYS HGL  E +++F LM++    +P+++
Sbjct: 723  MYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSV 782

Query: 547  TFVGVLSACSNGGLLEQGEAYFKSMVANY-GIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
            TF+ VLS CS+GG+ ++G   F  MV    G EP IEHY  +V L GRAG +++A + I+
Sbjct: 783  TFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIK 842

Query: 606  GIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW-- 663
             +PF+P+  IW +LLGAC +H NV IG   A+ +L+ E E+   +V+LSN+YA A  W  
Sbjct: 843  KMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDD 902

Query: 664  ---------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGY 714
                     EKA  KEPG SWIE    +H F A D SH     +   +  L++K ++AGY
Sbjct: 903  VRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAGY 962

Query: 715  IPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKI 774
            +P+LS VL DV +++KE+ L  HSEKLALAF L   P  +P+RIIKNLRICVDCH   K 
Sbjct: 963  VPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNFAKF 1022

Query: 775  ISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            +S++  RE+ +RD +RFHH   G CSCGD+W
Sbjct: 1023 LSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 1053



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 195/365 (53%), Gaps = 20/365 (5%)

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GLFNDCF 223
           V A + K  ++   ++ T LI  ++ C C+  AR+V D               G     +
Sbjct: 499 VHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGY 558

Query: 224 -EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
             EAL+ F +M   G  PN FTFA VL +C      ++ +  H   +KT +E  ++V  +
Sbjct: 559 ASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSS 618

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           LLD+Y K+G+I  ARR+F+ +P++DV+  + +I+ YAQ  L  +A++LF R+++  +  N
Sbjct: 619 LLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSN 678

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
             T+ SVL A + +  LD G Q+HS V+R  L   V + N+L+D+Y+KCG +  S  +F 
Sbjct: 679 YVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFD 738

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE-QVPATEVTYSSVLRACASLAALE 461
             P+R  ++WN M+VGY + G   +A+ +F  M EE +V    VT+ +VL  C+     +
Sbjct: 739 SMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMED 798

Query: 462 PGMQV--HCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMIS 518
            G+++    +  K  ++ ++     ++D++ + G + +A   +  M  +     W +++ 
Sbjct: 799 RGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLG 858

Query: 519 GYSMH 523
              +H
Sbjct: 859 ACRVH 863



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 109/372 (29%), Positives = 183/372 (49%), Gaps = 19/372 (5%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E     Y + L  CI    ++    +H  ++K      ++    L+ +Y K   L DA +
Sbjct: 474 EVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARR 533

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           + DEMPERN +S+   I GY+      EA+ LF  +   G   N F F   L    S   
Sbjct: 534 VLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSG 593

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN----DCF----- 223
            +L   + + V K   +S+ FVG++L+D ++  G +  AR+VFDGL       C      
Sbjct: 594 FQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISG 653

Query: 224 -------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
                  EEAL+ F +++  G + N  T+A VL A  GL  +   +  H   L+      
Sbjct: 654 YAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFY 713

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           + +  +L+D+Y+K G ++ +RRIF+ MP++ VI W+ M+  Y++  L  +AVELF  M++
Sbjct: 714 VVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKE 773

Query: 337 A-FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV--RVGLLSDVFVSNALMDVYAKCGR 393
              V P+  TF++VL  C+     D G +I   +V  + G   ++     ++D++ + GR
Sbjct: 774 ENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGR 833

Query: 394 MENSVELFAESP 405
           +E + E   + P
Sbjct: 834 VEEAFEFIKKMP 845



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 151/275 (54%), Gaps = 2/275 (0%)

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           + SVL  C +   +  G ++H+ +++      V++   L+ +Y KC  + ++  +  E P
Sbjct: 480 YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 539

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
           +RN V+W  MI GY Q G   +A+ +F +ML       E T+++VL +C S +  + G Q
Sbjct: 540 ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQ 599

Query: 466 VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGL 525
           +H L +K +++  + V ++L+DMYAK G I +AR VFD + + + VS  A+ISGY+  GL
Sbjct: 600 IHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGL 659

Query: 526 SAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYT 585
             E L +F  +Q+ G R N +T+  VL+A S    L+ G     S V    +   +    
Sbjct: 660 DEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQ-VHSHVLRAKLPFYVVLQN 718

Query: 586 SMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
           S++ +  + G L  + ++ + +P + +V+ W A+L
Sbjct: 719 SLIDMYSKCGSLTYSRRIFDSMP-ERTVISWNAML 752



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/177 (35%), Positives = 93/177 (52%), Gaps = 4/177 (2%)

Query: 435 MLEEQVPATEVT---YSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAK 491
           +LE  +   EV    Y SVL  C S  A+  G +VH   +K  Y+  V +   LI +Y K
Sbjct: 465 LLEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNK 524

Query: 492 CGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGV 551
           C  + DAR V D M + N VSW AMISGYS  G ++E L +F  M   G  PN  TF  V
Sbjct: 525 CRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATV 584

Query: 552 LSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIP 608
           L++C++    + G     S+V     E  I   +S++ +  +AG + +A ++ +G+P
Sbjct: 585 LTSCTSSSGFQLGRQ-IHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLP 640


>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 805

 Score =  506 bits (1303), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 274/777 (35%), Positives = 421/777 (54%), Gaps = 31/777 (3%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
           H++ + L+   +N  L    + H Q++      D F    L+  Y  L  L  A  +FD+
Sbjct: 32  HNFLSLLRESSKN--LIWVKSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQ 89

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
             +   +     + GY  S ++ E + LF  +     E++  + T  LK   S    E+ 
Sbjct: 90  FFQPKGLLCNAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMG 149

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND--------------- 221
             + +   + G + N FVG+++I      G +  A++VFDG+ N                
Sbjct: 150 MEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQA 209

Query: 222 -CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
            CF+ A   F +M   G KP+  T   +++AC G+  +++ K  HG  L      D+ V 
Sbjct: 210 GCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVL 269

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
            + +D+Y+K G+I +AR +F +MP ++++ W+ MI+   +  L  ++ +LF R+ ++   
Sbjct: 270 TSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGG 329

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
            +  T VS+LQ C+    L  G  +H   +R    S++ +S A++D+Y+KCG ++ +  +
Sbjct: 330 FDLTTIVSLLQGCSQTASLATGKILHGCAIR-SFESNLILSTAIVDLYSKCGSLKQATFV 388

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F     RN +TW  M+VG  Q G    A+ +F++M EE + A  VT+ S++ +CA L +L
Sbjct: 389 FNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSL 448

Query: 461 EPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS-WNAMISG 519
           + G  +H    +  +  D+V   AL+DMYAKCG I  A  +F   +   +V  WN+MI+G
Sbjct: 449 KRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITG 508

Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
           Y MHG   + + ++  M + G +PN  TF+ +LSACS+  L+EQG + F SM  ++ I P
Sbjct: 509 YGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRP 568

Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHI 639
             +HY  +V LL RAG  ++A  LIE +PFQP   +  ALL  C  H N+ +G  ++  +
Sbjct: 569 IEKHYACLVDLLSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKL 628

Query: 640 LDFEPEDEATHVLLSNIYAMARSWEK-----------AASKEPGLSWIENQGMVHYFRAG 688
           L  +  +   +++LSNIYA AR W+K              K PG S +E    VH F AG
Sbjct: 629 LALDAMNPGIYIMLSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAG 688

Query: 689 DTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALF 748
           D SH +   I   LE L      +GY+PD S VLRDV E+ K R LW HSE+LA+AF L 
Sbjct: 689 DNSHPNWEEIYHFLESLRSAVETSGYVPDTSCVLRDVDEEMKVRMLWGHSERLAIAFGLL 748

Query: 749 KMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
             P  S IRI KNLR+C DCHT  K ISKIV+REII+RD +RFHHF +G CSCGD+W
Sbjct: 749 TTPAGSLIRITKNLRVCGDCHTVTKYISKIVKREIIVRDANRFHHFSNGECSCGDYW 805



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/472 (27%), Positives = 248/472 (52%), Gaps = 21/472 (4%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E +S S   +L++C  + D +  M I    ++KG   + F  + +++  VK  ++ +A +
Sbjct: 127 EVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQR 186

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +FD MP ++ + + + I GY  +  F  A  LF  +H  G + +P   T+ ++    +G 
Sbjct: 187 VFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGN 246

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF-----------DGLFND 221
            +L  C+   V  LG  ++  V T+ +D +S  G +E AR VF           + + + 
Sbjct: 247 LKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISG 306

Query: 222 CFE-----EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
           C       E+ + F ++       +  T   +L+ C    ++   K  HGCA+++ +E +
Sbjct: 307 CVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRS-FESN 365

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           L ++ A++DLY+K G +  A  +F  M  ++VI W+ M+   AQ   + DA+ LF +M++
Sbjct: 366 LILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQE 425

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             +A N  TFVS++ +CA +  L  G  IH  + R+G   D+    AL+D+YAKCG++  
Sbjct: 426 EGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINL 485

Query: 397 SVELFAE-SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
           +  +F+  S  ++ V WN+MI GY   G   +A+ ++ KM+EE +   + T+ S+L AC+
Sbjct: 486 AERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACS 545

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDARLVFDMM 505
               +E G+ +   +++ ++++  +  +   L+D+ ++ G   +A+ + + M
Sbjct: 546 HSRLVEQGISLFN-SMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKM 596


>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
          Length = 784

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 250/571 (43%), Positives = 365/571 (63%), Gaps = 13/571 (2%)

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
           VL  C+    IR  +  H   +KTCYE  +Y+   L+ LY K   + +ARR+ +EMP+++
Sbjct: 16  VLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERN 75

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
           V+ W+ MI+ Y+Q   + +A+ LF  M  +  APN+FTF +VL +C +  G  LG QIHS
Sbjct: 76  VVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHS 135

Query: 368 LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK 427
           LV++    S +FV ++L+D+YAK G++  +  +F   P+R+ V+   +I GY QLG   +
Sbjct: 136 LVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEE 195

Query: 428 AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALID 487
           A+ +F ++  E + +  VTY+SVL A + LAAL+ G QVH   ++A     VV+ N+LID
Sbjct: 196 ALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLID 255

Query: 488 MYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW-RPNNL 546
           MY+KCGS+T +R +FD M +   +SWNAM+ GYS HGL  E +++F LM++    +P+++
Sbjct: 256 MYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSV 315

Query: 547 TFVGVLSACSNGGLLEQGEAYFKSMVANY-GIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
           TF+ VLS CS+GG+ ++G   F  MV    G EP IEHY  +V L GRAG +++A + I+
Sbjct: 316 TFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIK 375

Query: 606 GIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW-- 663
            +PF+P+  IW +LLGAC +H NV IG   A+ +L+ E E+   +V+LSN+YA A  W  
Sbjct: 376 KMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDD 435

Query: 664 ---------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGY 714
                    EKA  KEPG SWIE    +H F A D SH     +   +  L++K ++AGY
Sbjct: 436 VRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAGY 495

Query: 715 IPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKI 774
           +P+LS VL DV +++KE+ L  HSEKLALAF L   P  +P+RIIKNLRICVDCH   K 
Sbjct: 496 VPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNFAKF 555

Query: 775 ISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +S++  RE+ +RD +RFHH   G CSCGD+W
Sbjct: 556 LSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 586



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 195/365 (53%), Gaps = 20/365 (5%)

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GLFNDCF 223
           V A + K  ++   ++ T LI  ++ C C+  AR+V D               G     +
Sbjct: 32  VHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGY 91

Query: 224 -EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
             EAL+ F +M   G  PN FTFA VL +C      ++ +  H   +KT +E  ++V  +
Sbjct: 92  ASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSS 151

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           LLD+Y K+G+I  ARR+F+ +P++DV+  + +I+ YAQ  L  +A++LF R+++  +  N
Sbjct: 152 LLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSN 211

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
             T+ SVL A + +  LD G Q+HS V+R  L   V + N+L+D+Y+KCG +  S  +F 
Sbjct: 212 YVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFD 271

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE-QVPATEVTYSSVLRACASLAALE 461
             P+R  ++WN M+VGY + G   +A+ +F  M EE +V    VT+ +VL  C+     +
Sbjct: 272 SMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMED 331

Query: 462 PGMQV--HCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMIS 518
            G+++    +  K  ++ ++     ++D++ + G + +A   +  M  +     W +++ 
Sbjct: 332 RGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLG 391

Query: 519 GYSMH 523
              +H
Sbjct: 392 ACRVH 396



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 188/384 (48%), Gaps = 20/384 (5%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E     Y + L  CI    ++    +H  ++K      ++    L+ +Y K   L DA +
Sbjct: 7   EVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARR 66

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           + DEMPERN +S+   I GY+      EA+ LF  +   G   N F F   L    S   
Sbjct: 67  VLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSG 126

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN----DCF----- 223
            +L   + + V K   +S+ FVG++L+D ++  G +  AR+VFDGL       C      
Sbjct: 127 FQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISG 186

Query: 224 -------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
                  EEAL+ F +++  G + N  T+A VL A  GL  +   +  H   L+      
Sbjct: 187 YAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFY 246

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           + +  +L+D+Y+K G ++ +RRIF+ MP++ VI W+ M+  Y++  L  +AVELF  M++
Sbjct: 247 VVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKE 306

Query: 337 A-FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV--RVGLLSDVFVSNALMDVYAKCGR 393
              V P+  TF++VL  C+     D G +I   +V  + G   ++     ++D++ + GR
Sbjct: 307 ENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGR 366

Query: 394 MENSVELFAESP-KRNHVTWNTMI 416
           +E + E   + P +     W +++
Sbjct: 367 VEEAFEFIKKMPFEPTAAIWGSLL 390



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 151/275 (54%), Gaps = 2/275 (0%)

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           + SVL  C +   +  G ++H+ +++      V++   L+ +Y KC  + ++  +  E P
Sbjct: 13  YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 72

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
           +RN V+W  MI GY Q G   +A+ +F +ML       E T+++VL +C S +  + G Q
Sbjct: 73  ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQ 132

Query: 466 VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGL 525
           +H L +K +++  + V ++L+DMYAK G I +AR VFD + + + VS  A+ISGY+  GL
Sbjct: 133 IHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGL 192

Query: 526 SAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYT 585
             E L +F  +Q+ G R N +T+  VL+A S    L+ G     S V    +   +    
Sbjct: 193 DEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQ-VHSHVLRAKLPFYVVLQN 251

Query: 586 SMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
           S++ +  + G L  + ++ + +P + +V+ W A+L
Sbjct: 252 SLIDMYSKCGSLTYSRRIFDSMP-ERTVISWNAML 285


>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
 gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
          Length = 1175

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 262/766 (34%), Positives = 416/766 (54%), Gaps = 37/766 (4%)

Query: 27  GLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKG 86
           GL  +A    +Q   +   P  + +S        + L SC + +       IH Q  K G
Sbjct: 122 GLGEEALGLYRQMHRAGVVPTPYVLS--------SVLSSCTKAELFAQGRLIHAQGYKHG 173

Query: 87  NCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFS 146
            C ++F  N ++ +Y++      A ++F +MP R+T++F T I G+        A+ +F 
Sbjct: 174 FCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFE 233

Query: 147 TLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCG 206
            +   G   +    ++ L    S+G  +    + + ++K G  S+  +  +L+D +  CG
Sbjct: 234 EMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCG 293

Query: 207 CVEFARKVFD-----------------GLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVL 249
            VE A  +F+                 G  ND   ++   F QM+A G +PN FT+  +L
Sbjct: 294 DVETALVIFNSSDRTNVVLWNLMLVAFGQIND-LAKSFELFCQMQAAGIRPNQFTYPCIL 352

Query: 250 KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
           + C     I + +  H  ++KT +E D+YV+  L+D+Y+K G +  ARR+ E + +KDV+
Sbjct: 353 RTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVV 412

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
            W+ MIA Y Q +   DA+  F  M++  + P+     S +  CA +  +  G QIH+ +
Sbjct: 413 SWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARI 472

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAM 429
              G   DV + NAL+++YA+CGR+  +   F E   ++ +TWN ++ G+ Q G   +A+
Sbjct: 473 YVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEAL 532

Query: 430 IMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMY 489
            +F +M +  V     T+ S L A A+LA ++ G Q+H   +K  +  +  V NALI +Y
Sbjct: 533 KVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLY 592

Query: 490 AKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFV 549
            KCGS  DA++ F  M++ NEVSWN +I+  S HG   E L +FD M++ G +PN++TF+
Sbjct: 593 GKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFI 652

Query: 550 GVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF 609
           GVL+ACS+ GL+E+G +YFKSM   YGI P  +HY  ++ + GRAG LD+A K IE +P 
Sbjct: 653 GVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPI 712

Query: 610 QPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW------ 663
               M+WR LL AC +H N+E+G  +A+H+L+ EP D A++VLLSN YA+   W      
Sbjct: 713 AADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQV 772

Query: 664 -----EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDL 718
                ++   KEPG SWIE + +VH F  GD  H     I   L  +N +  K GY  + 
Sbjct: 773 RKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEK 832

Query: 719 SAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRI 764
             +  D  ++ ++    VHSEKLA+ F L  +PP  P+R+IKNLR+
Sbjct: 833 YHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLRV 878



 Score =  292 bits (748), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 181/589 (30%), Positives = 296/589 (50%), Gaps = 25/589 (4%)

Query: 59  YATSLQSCIQNDDL-QTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +A +L++C  N    Q    IH + + +G        N+L+++Y K   +  A ++F+E+
Sbjct: 44  FACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEEL 103

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
             R+ +S+V  + GY  +    EA+GL+  +HR G    P+  ++   VL S   AEL  
Sbjct: 104 SARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSS---VLSSCTKAELFA 160

Query: 178 ---CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF---- 223
               + A  YK G  S  FVG A+I  +  CG    A +VF  +       FN       
Sbjct: 161 QGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHA 220

Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                E AL  F +M+  G  P+  T + +L AC  L  ++     H    K     D  
Sbjct: 221 QCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYI 280

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           +  +LLDLY K G++  A  IF    + +V+ W+ M+  + Q +    + ELFC+M+ A 
Sbjct: 281 MEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAG 340

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           + PNQFT+  +L+ C     +DLG QIHSL V+ G  SD++VS  L+D+Y+K G +E + 
Sbjct: 341 IRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKAR 400

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            +     +++ V+W +MI GYVQ      A+  F +M +  +    +  +S +  CA + 
Sbjct: 401 RVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIN 460

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           A+  G+Q+H     + Y  DV + NAL+++YA+CG I +A   F+ +   +E++WN ++S
Sbjct: 461 AMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVS 520

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           G++  GL  E LKVF  M Q G + N  TFV  LSA +N   ++QG+    + V   G  
Sbjct: 521 GFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQ-IHARVIKTGHS 579

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
              E   +++SL G+ G  + A      +  +  V  W  ++ +C  H 
Sbjct: 580 FETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVS-WNTIITSCSQHG 627



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 151/523 (28%), Positives = 257/523 (49%), Gaps = 23/523 (4%)

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG--WAE 174
           M  R   S   T+ G+       + + LF+   R+   L P  F   L+     G  W +
Sbjct: 1   MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRW-Q 59

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
           + P + A     G      VG  LID +S  G V  AR+VF+ L                
Sbjct: 60  VVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYA 119

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            N   EEAL  + QM   G  P  +  + VL +C   +     +  H    K  +  +++
Sbjct: 120 QNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIF 179

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V  A++ LY + G    A R+F +MP +D + ++ +I+ +AQ      A+E+F  M+ + 
Sbjct: 180 VGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSG 239

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           ++P+  T  S+L ACA++  L  G Q+HS + + G+ SD  +  +L+D+Y KCG +E ++
Sbjct: 240 LSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETAL 299

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            +F  S + N V WN M+V + Q+ ++ K+  +F +M    +   + TY  +LR C    
Sbjct: 300 VIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTR 359

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
            ++ G Q+H L+VK  ++ D+ V+  LIDMY+K G +  AR V +M+ + + VSW +MI+
Sbjct: 360 EIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIA 419

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG-EAYFKSMVANYGI 577
           GY  H    + L  F  MQ+ G  P+N+     +S C+    + QG + + +  V+ Y  
Sbjct: 420 GYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSG 479

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
           +  I  + ++V+L  R G + +A    E I  +  +  W  L+
Sbjct: 480 DVSI--WNALVNLYARCGRIREAFSSFEEIEHKDEI-TWNGLV 519


>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1176

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 262/766 (34%), Positives = 416/766 (54%), Gaps = 37/766 (4%)

Query: 27  GLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKG 86
           GL  +A    +Q   +   P  + +S        + L SC + +       IH Q  K G
Sbjct: 122 GLGEEALGLYRQMHRAGVVPTPYVLS--------SVLSSCTKAELFAQGRLIHAQGYKHG 173

Query: 87  NCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFS 146
            C ++F  N ++ +Y++      A ++F +MP R+T++F T I G+        A+ +F 
Sbjct: 174 FCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFE 233

Query: 147 TLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCG 206
            +   G   +    ++ L    S+G  +    + + ++K G  S+  +  +L+D +  CG
Sbjct: 234 EMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCG 293

Query: 207 CVEFARKVFD-----------------GLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVL 249
            VE A  +F+                 G  ND   ++   F QM+A G +PN FT+  +L
Sbjct: 294 DVETALVIFNSSDRTNVVLWNLMLVAFGQIND-LAKSFELFCQMQAAGIRPNQFTYPCIL 352

Query: 250 KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
           + C     I + +  H  ++KT +E D+YV+  L+D+Y+K G +  ARR+ E + +KDV+
Sbjct: 353 RTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVV 412

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
            W+ MIA Y Q +   DA+  F  M++  + P+     S +  CA +  +  G QIH+ +
Sbjct: 413 SWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARI 472

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAM 429
              G   DV + NAL+++YA+CGR+  +   F E   ++ +TWN ++ G+ Q G   +A+
Sbjct: 473 YVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEAL 532

Query: 430 IMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMY 489
            +F +M +  V     T+ S L A A+LA ++ G Q+H   +K  +  +  V NALI +Y
Sbjct: 533 KVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLY 592

Query: 490 AKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFV 549
            KCGS  DA++ F  M++ NEVSWN +I+  S HG   E L +FD M++ G +PN++TF+
Sbjct: 593 GKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFI 652

Query: 550 GVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF 609
           GVL+ACS+ GL+E+G +YFKSM   YGI P  +HY  ++ + GRAG LD+A K IE +P 
Sbjct: 653 GVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPI 712

Query: 610 QPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW------ 663
               M+WR LL AC +H N+E+G  +A+H+L+ EP D A++VLLSN YA+   W      
Sbjct: 713 AADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQV 772

Query: 664 -----EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDL 718
                ++   KEPG SWIE + +VH F  GD  H     I   L  +N +  K GY  + 
Sbjct: 773 RKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEK 832

Query: 719 SAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRI 764
             +  D  ++ ++    VHSEKLA+ F L  +PP  P+R+IKNLR+
Sbjct: 833 YHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLRV 878



 Score =  292 bits (748), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 181/590 (30%), Positives = 296/590 (50%), Gaps = 25/590 (4%)

Query: 59  YATSLQSCIQNDDL-QTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +A +L++C  N    Q    IH + + +G        N+L+++Y K   +  A ++F+E+
Sbjct: 44  FACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEEL 103

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
             R+ +S+V  + GY  +    EA+GL+  +HR G    P+  ++   VL S   AEL  
Sbjct: 104 SARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSS---VLSSCTKAELFA 160

Query: 178 ---CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF---- 223
               + A  YK G  S  FVG A+I  +  CG    A +VF  +       FN       
Sbjct: 161 QGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHA 220

Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                E AL  F +M+  G  P+  T + +L AC  L  ++     H    K     D  
Sbjct: 221 QCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYI 280

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           +  +LLDLY K G++  A  IF    + +V+ W+ M+  + Q +    + ELFC+M+ A 
Sbjct: 281 MEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAG 340

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           + PNQFT+  +L+ C     +DLG QIHSL V+ G  SD++VS  L+D+Y+K G +E + 
Sbjct: 341 IRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKAR 400

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            +     +++ V+W +MI GYVQ      A+  F +M +  +    +  +S +  CA + 
Sbjct: 401 RVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIN 460

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           A+  G+Q+H     + Y  DV + NAL+++YA+CG I +A   F+ +   +E++WN ++S
Sbjct: 461 AMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVS 520

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           G++  GL  E LKVF  M Q G + N  TFV  LSA +N   ++QG+    + V   G  
Sbjct: 521 GFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQ-IHARVIKTGHS 579

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
              E   +++SL G+ G  + A      +  +  V  W  ++ +C  H  
Sbjct: 580 FETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVS-WNTIITSCSQHGR 628



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 151/523 (28%), Positives = 257/523 (49%), Gaps = 23/523 (4%)

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG--WAE 174
           M  R   S   T+ G+       + + LF+   R+   L P  F   L+     G  W +
Sbjct: 1   MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRW-Q 59

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
           + P + A     G      VG  LID +S  G V  AR+VF+ L                
Sbjct: 60  VVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYA 119

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            N   EEAL  + QM   G  P  +  + VL +C   +     +  H    K  +  +++
Sbjct: 120 QNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIF 179

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V  A++ LY + G    A R+F +MP +D + ++ +I+ +AQ      A+E+F  M+ + 
Sbjct: 180 VGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSG 239

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           ++P+  T  S+L ACA++  L  G Q+HS + + G+ SD  +  +L+D+Y KCG +E ++
Sbjct: 240 LSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETAL 299

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            +F  S + N V WN M+V + Q+ ++ K+  +F +M    +   + TY  +LR C    
Sbjct: 300 VIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTR 359

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
            ++ G Q+H L+VK  ++ D+ V+  LIDMY+K G +  AR V +M+ + + VSW +MI+
Sbjct: 360 EIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIA 419

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG-EAYFKSMVANYGI 577
           GY  H    + L  F  MQ+ G  P+N+     +S C+    + QG + + +  V+ Y  
Sbjct: 420 GYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSG 479

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
           +  I  + ++V+L  R G + +A    E I  +  +  W  L+
Sbjct: 480 DVSI--WNALVNLYARCGRIREAFSSFEEIEHKDEI-TWNGLV 519


>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1134

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 287/761 (37%), Positives = 438/761 (57%), Gaps = 38/761 (4%)

Query: 81   QVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVE 140
            ++ K G   DL+  + L+N + +   +  A  +F +M +RN ++    + G     Q  E
Sbjct: 376  RIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEE 435

Query: 141  AVGLFSTLHREGHELNPFAFTAFLKVLVSMG----WAELCPCVFACVYKLGH-DSNAFVG 195
            A  +F  + ++  E+N  +    L                  V A +++ G  D+   +G
Sbjct: 436  AAKVFKEM-KDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIG 494

Query: 196  TALIDAFSVCGCVEFARKVFD---------------GL-FNDCFEEALNFFSQMRAVGFK 239
             AL++ +  C  ++ A  VF                GL  N+ FEEA++ F  M+  G  
Sbjct: 495  NALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMV 554

Query: 240  PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
            P+NF+    L +C  L  + + +  HG   K   ++D+ V+ ALL LY ++  I+  +++
Sbjct: 555  PSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKV 614

Query: 300  FEEMPKKDVIPWSFMIARYAQTDLSI-DAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
            F +MP+ D + W+  I   A+ + S+  A++ F  M QA   PN+ TF+++L A ++   
Sbjct: 615  FFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSV 674

Query: 359  LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE-SPKRNHVTWNTMIV 417
            L LG+QIH+L+++  +  D  + NAL+  Y KC +ME+   +F+  S +R+ V+WN+MI 
Sbjct: 675  LGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMIS 734

Query: 418  GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM 477
            GY+  G + KAM +   M++        T+++VL ACAS+A LE GM+VH   V+A  + 
Sbjct: 735  GYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLES 794

Query: 478  DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQ 537
            DVVV +AL+DMYAKCG I  A   F++M   N  SWN+MISGY+ HG   + LK+F  M+
Sbjct: 795  DVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMK 854

Query: 538  QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHL 597
            Q G  P+++TFVGVLSACS+ GL+++G  +FKSM   YG+ P IEH++ MV LLGRAG +
Sbjct: 855  QHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDV 914

Query: 598  DKAAKLIEGIPFQPSVMIWRALLGACIIHN--NVEIGRLSAQHILDFEPEDEATHVLLSN 655
             K    I+ +P  P+++IWR +LGAC   N  N E+G+ +A+ +++ EP++   +VLLSN
Sbjct: 915  KKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLSN 974

Query: 656  IYAMARSWEK-----------AASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEW 704
            ++A   +WE            A  K+ G SW+  +  VH F AGD +H +   I   L+ 
Sbjct: 975  MHAAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDGVHLFVAGDQTHPEKEKIYEKLKE 1034

Query: 705  LNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRI 764
            L  K R AGY+P+    L D+  + KE  L  HSEKLA+AF L +     PIRI+KNLR+
Sbjct: 1035 LMNKIRDAGYVPETKYALYDLELENKEELLSYHSEKLAIAFVLTR-KSELPIRIMKNLRV 1093

Query: 765  CVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            C DCHTA K ISKIV R+II+RD +RFHHF  G CSCGD+W
Sbjct: 1094 CGDCHTAFKYISKIVGRQIILRDSNRFHHFGGGMCSCGDYW 1134



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 161/544 (29%), Positives = 268/544 (49%), Gaps = 41/544 (7%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           SEF+ +  ++SL           A  +H Q+ K G   D+F  N L+N+YV++  L  A 
Sbjct: 145 SEFDRYKTSSSLYD---------ANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSAR 195

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
           KLFDEMP++N +S+   I GYT +    EA  LF  +   G   N FA  + L+     G
Sbjct: 196 KLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCG 255

Query: 172 WA--ELCPCVFACVYKLGHDSNAFVGTALIDAFSVC-GCVEFARKVFDGL-------FND 221
               +L   + A + KL   S+  +   L+  +S C G ++ A +VFD +       +N 
Sbjct: 256 STGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNS 315

Query: 222 CFE---------EALNFFSQMRAVG----FKPNNFTF-AFVLKACLGLDTIRVAKSAHGC 267
                        A   FS M+  G     +PN +T  + V  AC   D   V       
Sbjct: 316 IISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLT 375

Query: 268 AL-KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSID 326
            + K+ +  DLYV  AL++ + + G +  A+ IF++M  ++ +  + ++   A+     +
Sbjct: 376 RIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEE 435

Query: 327 AVELFCRMRQAFVAPNQFTFVSVLQACATM----EGLDLGNQIHSLVVRVGLL-SDVFVS 381
           A ++F  M+   V  N  + V +L          EG   G ++H+ + R GL+ + + + 
Sbjct: 436 AAKVFKEMKD-LVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIG 494

Query: 382 NALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVP 441
           NAL+++Y KC  ++N+  +F   P ++ V+WN+MI G        +A+  F  M    + 
Sbjct: 495 NALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMV 554

Query: 442 ATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLV 501
            +  +  S L +C+SL  L  G Q+H    K   D+DV V+NAL+ +YA+  SI + + V
Sbjct: 555 PSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKV 614

Query: 502 FDMMNDWNEVSWNAMISGYSMHGLSA-EVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGL 560
           F  M ++++VSWN+ I   + +  S  + LK F  M Q GWRPN +TF+ +L+A S+  +
Sbjct: 615 FFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSV 674

Query: 561 LEQG 564
           L  G
Sbjct: 675 LGLG 678



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 58/126 (46%)

Query: 46  PITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLN 105
           P+     + +  ++AT L +C     L+  M +H   ++     D+   + L+++Y K  
Sbjct: 751 PMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCG 810

Query: 106 RLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLK 165
           ++  A++ F+ MP RN  S+ + I GY       +A+ +F+ + + G   +   F   L 
Sbjct: 811 KIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLS 870

Query: 166 VLVSMG 171
               +G
Sbjct: 871 ACSHVG 876


>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
 gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
          Length = 936

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 281/778 (36%), Positives = 419/778 (53%), Gaps = 27/778 (3%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  ++   L S +  D L+    IH  V +  + LD+F    L+N Y K   L DA K+F
Sbjct: 159 NVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVF 218

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D MP R+  ++ + I  Y++S +  EA  +F  + +EG   +   F + L   V+    +
Sbjct: 219 DGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQ 278

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL--------------FN 220
               V   + +   + + FVGTALI  ++ C   E A +VF  +              F 
Sbjct: 279 HGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFA 338

Query: 221 DCFE--EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
           D     EAL +F  M+  G  PN  TF  +L        +      H    +   +    
Sbjct: 339 DHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTT 398

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           +  AL+++Y +     +AR +F+++   ++I W+ MI  Y Q +   DA++LF  M+Q  
Sbjct: 399 MRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQG 458

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           + P++  F+++L AC           +H  V   GL     V  +L+++YAK G ++ + 
Sbjct: 459 IQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAE 518

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            +  E  ++    WN +I GY   G   +A+  + K+  E +P  +VT+ SVL AC S  
Sbjct: 519 VILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSST 578

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           +L  G  +H   V+   D DV+V NAL +MY+KCGS+ +AR +FD M   + VSWN M+ 
Sbjct: 579 SLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQ 638

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
            Y+ HG S EVLK+   M+Q G + N +TFV VLS+CS+ GL+ +G  YF S+  + GIE
Sbjct: 639 AYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIE 698

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
              EHY  +V LLGRAG L +A K I  +P +P ++ W +LLGAC +  +++ G+L+A  
Sbjct: 699 VKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWASLLGACRVQKDLDRGKLAAGK 758

Query: 639 ILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRA 687
           +L+ +P + +  V+LSNIY+    W+ AA            K PG+S I+ +  VH FR 
Sbjct: 759 LLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRV 818

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFAL 747
            DTSH     I   +E L    R+AGY+PD   VL DV E++KE  L  HSEKLA+AF L
Sbjct: 819 RDTSHPRAAEIYDKVEELCFAMREAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGL 878

Query: 748 FKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
              P +S + I KNLR+C DCHTA K ISKI  REI++RD HRFHHF+DG CSC D+W
Sbjct: 879 ISTPETSSLHIFKNLRVCEDCHTATKFISKITGREIVVRDNHRFHHFRDGSCSCKDYW 936



 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 184/664 (27%), Positives = 314/664 (47%), Gaps = 37/664 (5%)

Query: 100 VYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFA 159
           +Y +   L DA   F ++  RN +S+   I  Y+    F EA+ LF  +  EG   N   
Sbjct: 1   MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60

Query: 160 FTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF 219
             A L    S         V A   + G   N  V TAL++ +  CG +  A+ VF+ + 
Sbjct: 61  LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120

Query: 220 ND-----------------CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAK 262
                              C++ A+  F++M   G K N  TF  VL + +  D +R  K
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGK 180

Query: 263 SAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTD 322
             H C  ++ + +D++V  AL++ YTK G +++AR++F+ MP + V  W+ MI+ Y+ ++
Sbjct: 181 FIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISE 240

Query: 323 LSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSN 382
            S +A  +F RM+Q     ++ TF+S+L AC   E L  G  +   +       D+FV  
Sbjct: 241 RSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGT 300

Query: 383 ALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPA 442
           AL+ +YA+C   E++ ++F    + N +TW+ +I  +   G  G+A+  F  M +E +  
Sbjct: 301 ALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILP 360

Query: 443 TEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVF 502
             VT+ S+L    + + LE   ++H L  +   D    + NAL+++Y +C S  DAR VF
Sbjct: 361 NRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVF 420

Query: 503 DMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLE 562
           D +   N +SWN+MI  Y       + L++F  MQQ+G +P+ + F+ +L AC+ G    
Sbjct: 421 DQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGR 480

Query: 563 QGEAYFKSM-VANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLG 621
             +   + +  +  G  P ++  TS+V++  +AG LD A  +++ +  Q  +  W  L+ 
Sbjct: 481 TRKLVHQCVEESGLGGSPLVQ--TSLVNMYAKAGELDVAEVILQEMDEQ-QITAWNVLIN 537

Query: 622 ACIIHNNVEIGRLSAQHILDFE--PEDEATHVLLSNIYAMARSWEKAA-----SKEPGLS 674
              +H       L A   L  E  P D+ T + + N    + S  +       + E GL 
Sbjct: 538 GYALHGRSREA-LEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLD 596

Query: 675 ---WIENQGMVHYFRAGDTSHA----DMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVRE 727
               ++N     Y + G   +A    D   IR  + W  M    A +  +   VL+ +R+
Sbjct: 597 SDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQH-GESEEVLKLIRK 655

Query: 728 DEKE 731
            E+E
Sbjct: 656 MEQE 659



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 158/593 (26%), Positives = 295/593 (49%), Gaps = 19/593 (3%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N+ +    L SC    +L+  + +H   L++G   +      LLN+Y K   L DA  +F
Sbjct: 57  NAITLVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVF 116

Query: 115 DEMPERNTISFVTTIQGYTVSS-QFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           +EM E+N +++   +  Y++    +  AV LF+ +  EG + N   F   L  +V     
Sbjct: 117 EEMAEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDAL 176

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL--------------- 218
                + +CV +  H  + FV TAL++ ++ CG +  ARKVFDG+               
Sbjct: 177 RKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAY 236

Query: 219 -FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
             ++   EA   F +M+  G + +  TF  +L AC+  +T++  K       +T +E+DL
Sbjct: 237 SISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDL 296

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
           +V  AL+ +Y +     +A ++F  M + ++I WS +I  +A      +A+  F  M+Q 
Sbjct: 297 FVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQE 356

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            + PN+ TF+S+L    T  GL+  ++IH L+   GL     + NAL++VY +C   +++
Sbjct: 357 GILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDA 416

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
             +F +    N ++WN+MI  YVQ      A+ +F  M ++ +    V + ++L AC   
Sbjct: 417 RTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIG 476

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
           +       VH    ++      +V  +L++MYAK G +  A ++   M++    +WN +I
Sbjct: 477 SHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLI 536

Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
           +GY++HG S E L+ +  +Q      + +TF+ VL+AC++   L +G+    + V   G+
Sbjct: 537 NGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAV-ECGL 595

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
           +  +    ++ ++  + G ++ A ++ + +P + +V  W  +L A   H   E
Sbjct: 596 DSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVS-WNGMLQAYAQHGESE 647


>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 876

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 271/780 (34%), Positives = 435/780 (55%), Gaps = 33/780 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +S++ +  L  C  + +      +HCQ +K G    L   N L+++Y K   + D  ++F
Sbjct: 101 DSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVF 160

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           DEM +R+ +S+ + + GY+ +    +   LF  +  EG+  + +  +  +  L + G   
Sbjct: 161 DEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVA 220

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN-DCFE--------- 224
           +   + A V KLG ++   V  +LI   S  G +  AR VFD + N D            
Sbjct: 221 IGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHV 280

Query: 225 ------EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                 EA   F+ M+  G KP + TFA V+K+C  L  + + +  H   LK+    +  
Sbjct: 281 INGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQN 340

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPK-KDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
           V  AL+   TK  EI +A  +F  M   + V+ W+ MI+ Y Q   +  AV LF  MR+ 
Sbjct: 341 VLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRRE 400

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            V PN FT+ ++L    T++     ++IH+ V++        V  AL+D + K G + ++
Sbjct: 401 GVKPNHFTYSTIL----TVQHAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDA 456

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC-AS 456
           V++F     ++ + W+ M+ GY Q GE  +A  +F ++  E +   E T+ S++ AC A 
Sbjct: 457 VKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAP 516

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
            A++E G Q H   +K   +  + V+++L+ +YAK G+I  A  +F    + + VSWN+M
Sbjct: 517 TASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSM 576

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           ISGY+ HG + + L+VF+ MQ+R    + +TF+GV+SAC++ GL+ +G+ YF  M+ ++ 
Sbjct: 577 ISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHH 636

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
           I P +EHY+ M+ L  RAG L KA  +I G+PF P+  +WR +L A  +H N+E+G+L+A
Sbjct: 637 INPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIELGKLAA 696

Query: 637 QHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYF 685
           + I+  EP+  A +VLLSNIYA A +W           ++   KEPG SWIE +   + F
Sbjct: 697 EKIISLEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTYSF 756

Query: 686 RAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAF 745
            AGD SH   + I   L  LN + R  GY PD + V  D+ +++KE  L  HSE+LA+AF
Sbjct: 757 LAGDLSHPLSDHIYSKLSELNTRLRDVGYQPDTNYVFHDIEDEQKETILSHHSERLAIAF 816

Query: 746 ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            L    P  P++I+KNLR+C DCH+ IK++S + +R I++RD +RFHHF+ G CSCGD+W
Sbjct: 817 GLIATLPEIPLQIVKNLRVCGDCHSFIKLVSLVEKRYIVVRDSNRFHHFKGGLCSCGDYW 876



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 148/525 (28%), Positives = 264/525 (50%), Gaps = 45/525 (8%)

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLV- 168
           A +LFD+ P R+       +  Y+   Q  EA+ LF +L+R G   + +  +  L V   
Sbjct: 55  AQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAG 114

Query: 169 ----SMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL------ 218
               ++G    C CV     K G   +  VG +L+D ++  G V   R+VFD +      
Sbjct: 115 SFNGTVGEQVHCQCV-----KCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVV 169

Query: 219 -------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAH 265
                        FND   +    F  M+  G++P+ +T + V+ A      + +    H
Sbjct: 170 SWNSLLTGYSWNRFND---QVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIH 226

Query: 266 GCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSI 325
              +K  +E +  V  +L+ + +KSG + +AR +F+ M  KD + W+ MIA +      +
Sbjct: 227 ALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDL 286

Query: 326 DAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALM 385
           +A E F  M+ A   P   TF SV+++CA+++ L L   +H   ++ GL ++  V  ALM
Sbjct: 287 EAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALM 346

Query: 386 DVYAKCGRMENSVELFA-ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATE 444
               KC  ++++  LF+     ++ V+W  MI GY+Q G+  +A+ +FS M  E V    
Sbjct: 347 VALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNH 406

Query: 445 VTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDM 504
            TYS++L    ++   E    +H   +K NY+    V  AL+D + K G+I+DA  VF++
Sbjct: 407 FTYSTILTVQHAVFISE----IHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFEL 462

Query: 505 MNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSN-GGLLEQ 563
           +   + ++W+AM++GY+  G + E  K+F  + + G +PN  TF  +++AC+     +EQ
Sbjct: 463 IETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQ 522

Query: 564 GE---AYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
           G+   AY   +  N  +  C+   +S+V+L  + G+++ A ++ +
Sbjct: 523 GKQFHAYAIKLRLNNAL--CVS--SSLVTLYAKRGNIESAHEIFK 563



 Score =  202 bits (513), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 213/403 (52%), Gaps = 7/403 (1%)

Query: 221 DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
           D  +EAL+ F  +   G  P+++T + VL  C G     V +  H   +K      L V 
Sbjct: 81  DQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVG 140

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
            +L+D+YTK+G + + RR+F+EM  +DV+ W+ ++  Y+    +    ELFC M+     
Sbjct: 141 NSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYR 200

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           P+ +T  +V+ A A    + +G QIH+LVV++G  ++  V N+L+ + +K G + ++  +
Sbjct: 201 PDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVV 260

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F     ++ V+WN+MI G+V  G+  +A   F+ M       T  T++SV+++CASL  L
Sbjct: 261 FDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKEL 320

Query: 461 EPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE-VSWNAMISG 519
                +HC T+K+    +  V  AL+    KC  I DA  +F +M+     VSW AMISG
Sbjct: 321 GLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISG 380

Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
           Y  +G + + + +F LM++ G +PN+ T+  +L+      +    E + + +  NY    
Sbjct: 381 YLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHAVFI---SEIHAEVIKTNYEKSS 437

Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
            +   T+++    + G++  A K+ E I  +  V+ W A+L  
Sbjct: 438 SVG--TALLDAFVKIGNISDAVKVFELIETK-DVIAWSAMLAG 477



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 176/328 (53%), Gaps = 3/328 (0%)

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACAT 355
           A+++F++ P +D+   + ++ RY++ D + +A+ LF  + ++ ++P+ +T   VL  CA 
Sbjct: 55  AQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAG 114

Query: 356 MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTM 415
                +G Q+H   V+ GL+  + V N+L+D+Y K G + +   +F E   R+ V+WN++
Sbjct: 115 SFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSL 174

Query: 416 IVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY 475
           + GY       +   +F  M  E       T S+V+ A A+  A+  GMQ+H L VK  +
Sbjct: 175 LTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGF 234

Query: 476 DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDL 535
           + + +V N+LI M +K G + DAR+VFD M + + VSWN+MI+G+ ++G   E  + F+ 
Sbjct: 235 ETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNN 294

Query: 536 MQQRGWRPNNLTFVGVLSACSNGGLLEQGEA-YFKSMVANYGIEPCIEHYTSMVSLLGRA 594
           MQ  G +P + TF  V+ +C++  L E G            G+       T+++  L + 
Sbjct: 295 MQLAGAKPTHATFASVIKSCAS--LKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKC 352

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGA 622
             +D A  L   +    SV+ W A++  
Sbjct: 353 KEIDDAFSLFSLMHGVQSVVSWTAMISG 380



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 120/228 (52%), Gaps = 2/228 (0%)

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
           +LF ++P R+    N ++  Y +  +  +A+ +F  +    +     T S VL  CA   
Sbjct: 57  QLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAGSF 116

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
               G QVHC  VK      + V N+L+DMY K G++ D R VFD M D + VSWN++++
Sbjct: 117 NGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLT 176

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           GYS +  + +V ++F LMQ  G+RP+  T   V++A +N G +  G     ++V   G E
Sbjct: 177 GYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIG-MQIHALVVKLGFE 235

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH 626
                  S++S+L ++G L  A  + + +  + SV  W +++   +I+
Sbjct: 236 TERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVS-WNSMIAGHVIN 282


>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 829

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 284/774 (36%), Positives = 431/774 (55%), Gaps = 45/774 (5%)

Query: 71  DLQTAMTIHCQVLKKGNCL--DLFATNVLLNVYVKLNRLPDATKLFDEMPE--RNTISFV 126
           D+     +   +L+ G+ L  D    N LL +Y K + +  A  +FD MP   R+ +S+ 
Sbjct: 62  DIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWT 121

Query: 127 TTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP-CVFACVYK 185
                 + +    EA+ LF     EG   N F   A  +   +     L    V   V+K
Sbjct: 122 AMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFK 181

Query: 186 LGH-DSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF----------------EEALN 228
           LG   ++  VG ALID F+  G +   R+VFDGLF                    +EA+ 
Sbjct: 182 LGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVE 241

Query: 229 FFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYT 288
            F  M   GF+P+ +T + +L AC  L + R+ +  H  AL+   E D  V+  L+D+Y 
Sbjct: 242 LFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYA 301

Query: 289 KS---GEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVE-LFCRMRQAFVAPNQF 344
           KS     + NAR +F  MPK +V+ W+ +++ Y Q     + V  LFC+M    + PN  
Sbjct: 302 KSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHI 361

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           T+ S+L+ACA +   D G QIH+  V+  L     V NAL+ +YA+ G +E +   F + 
Sbjct: 362 TYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQL 421

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE-QVPATEVTYSSVLRACASLAALEPG 463
            ++N V+++  + G       G++       +E  ++  +  T+ S++ A AS+  L  G
Sbjct: 422 YEKNMVSFSGNLDGD------GRSNTYQDYQIERMELGISTFTFGSLISAAASVGMLTKG 475

Query: 464 MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMH 523
            ++H L++KA +  D  + N+L+ MY++CG + DA  VFD MND N +SW +MISG + H
Sbjct: 476 QRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKH 535

Query: 524 GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEH 583
           G +A  L++F  M   G +PN++T++ VLSACS+ GL+++G+ +F+ M  ++G+ P +EH
Sbjct: 536 GYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEH 595

Query: 584 YTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFE 643
           Y  MV LLGR+G ++ A   I  +P Q   ++W+ LLGAC  HNN++IG ++A H++  E
Sbjct: 596 YACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQLE 655

Query: 644 PEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSH 692
           P+D A +VLLSN+YA A  W++ A            KE GLSW+     +H FRAGDTSH
Sbjct: 656 PQDPAPYVLLSNLYAEAGLWDQVARIRSLMRDKNLMKEKGLSWMHVDNTIHEFRAGDTSH 715

Query: 693 ADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFK-MP 751
                I   LE L  + +  GY+PD S VL D+ ++ KE  L  HSEK+A+AF L     
Sbjct: 716 PQAEEIYTKLETLIREIKVMGYVPDTSVVLHDMSDELKELCLLQHSEKIAVAFGLISCTS 775

Query: 752 PSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            + PIRI KNLR+CVDCH+A+K +SK   REII+RD +RFH  +DG CSCG++W
Sbjct: 776 ATKPIRIFKNLRVCVDCHSALKYVSKATGREIILRDSNRFHRMKDGECSCGEYW 829



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 125/287 (43%), Gaps = 37/287 (12%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDL-FATNVLLNVYVKLNRLPDATKL 113
           N  +Y++ L++C    D  +   IH   +K  N  DL    N L+++Y +   + +A   
Sbjct: 359 NHITYSSMLKACANLGDQDSGRQIHTHCVKS-NLADLNVVGNALVSMYAESGSIEEARHA 417

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           FD++ E+N +SF   + G   S+ + +       + R    ++ F F + +    S+G  
Sbjct: 418 FDQLYEKNMVSFSGNLDGDGRSNTYQD-----YQIERMELGISTFTFGSLISAAASVGML 472

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GL 218
                + A   K G  S+  +G +L+  +S CG +  A +VFD               GL
Sbjct: 473 TKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGL 532

Query: 219 FNDCF-EEALNFFSQMRAVGFKPNNFTFAFVLKACL-------GLDTIRVAKSAHGCALK 270
               +   AL  F  M A G KPN+ T+  VL AC        G +  R+ +  HG   +
Sbjct: 533 AKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPR 592

Query: 271 TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
               M+ Y    ++DL  +SG + +A     EMP + D + W  ++ 
Sbjct: 593 ----MEHY--ACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLG 633


>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 280/764 (36%), Positives = 417/764 (54%), Gaps = 33/764 (4%)

Query: 71  DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQ 130
           D      +HCQ LK G   D+     L+++Y+K     D   +FDEM  +N +S+ + + 
Sbjct: 119 DQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLS 178

Query: 131 GYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDS 190
           GY  +    E + L + +  EG   N F F   L  L      E    V A + K G + 
Sbjct: 179 GYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEF 238

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFDGLF-NDC---------------FEEALNFFSQMR 234
             FV  ALI  +     V  A  VFD +   D                + E    F +MR
Sbjct: 239 TTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMR 298

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
             G K +   F   LK C     +   K  H   +K  YE    +  AL+  Y+K   + 
Sbjct: 299 LAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVD 358

Query: 295 NARRIFEEM-PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
            A ++F       +V+ W+ MI  + Q + +  AV+LFC+M +  V PN FT+ +VL   
Sbjct: 359 EAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGK 418

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
            +     L +Q+H+ +++        V+ AL+D Y K G +  S  +F   P ++ V W+
Sbjct: 419 PS----SLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWS 474

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA-LEPGMQVHCLTVK 472
            M+ G  Q  +  KAM +F ++++E V   E T+SSV+ AC+S AA +E G Q+H   VK
Sbjct: 475 AMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVK 534

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
           +     + V++AL+ MY+K G+I  A  VF    + + VSWN+MI+GY  HG + + L+V
Sbjct: 535 SGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEV 594

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
           F +MQ +G   +++TF+GVL+AC++ GL+E+GE YF  M+ +Y I+  IEHY+ MV L  
Sbjct: 595 FQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYS 654

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVL 652
           RAG  DKA  +I G+PF  S  IWR LL AC +H N+E+G+L+A+ ++  +P D   +VL
Sbjct: 655 RAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVL 714

Query: 653 LSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGM 701
           LSNI+A+A +WE+ A            KE G SWIE +  +  F AGD SH   +++   
Sbjct: 715 LSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAK 774

Query: 702 LEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKN 761
           LE L++K +  GY PD + V  DV E+ KE  L  HSE+LA+A+ L  +PP +PI+I KN
Sbjct: 775 LEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPGAPIQIEKN 834

Query: 762 LRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           LRIC DCH  I++IS I +R +I+RD +RFHHF+ G CSCG +W
Sbjct: 835 LRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 138/471 (29%), Positives = 241/471 (51%), Gaps = 25/471 (5%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  ++AT L +      ++  + +H  ++K G     F  N L+ +Y+K   + DA  +F
Sbjct: 204 NGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVF 263

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D M  R+++++   I GY     ++E   +F  +   G +L+   F   LK+        
Sbjct: 264 DSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELN 323

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GLF 219
               +   V K G++    + TAL+  +S C  V+ A K+F                G F
Sbjct: 324 FTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGF 383

Query: 220 --NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
             N+  E+A++ F QM   G +PN+FT++ VL          +    H   +K  YE   
Sbjct: 384 VQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAG----KPSSLLSQLHAQIIKAYYEKVP 439

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
            VA ALLD Y K+G +  + R+F  +P KD++ WS M+   AQT  S  A+E+F ++ + 
Sbjct: 440 SVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKE 499

Query: 338 FVAPNQFTFVSVLQACATMEG-LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
            V PN++TF SV+ AC++    ++ G QIH+  V+ G  + + VS+AL+ +Y+K G +E+
Sbjct: 500 GVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIES 559

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           + ++F    +R+ V+WN+MI GY Q G+  KA+ +F  M  + +P  +VT+  VL AC  
Sbjct: 560 AEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTH 619

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDARLVFDMM 505
              +E G +   + +K +Y +D  + +   ++D+Y++ G    A  + + M
Sbjct: 620 AGLVEEGEKYFNIMIK-DYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGM 669



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 145/513 (28%), Positives = 249/513 (48%), Gaps = 25/513 (4%)

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A +LFDE P ++   +   +  ++ ++   EA+ LF  LH  G  ++    +  LKV   
Sbjct: 57  AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------- 218
           +    +   V     K G   +  VGT+L+D +      E  R +FD +           
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176

Query: 219 -----FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY 273
                 N   +E ++  +QM+  G  PN FTFA VL A      I      H   +K  +
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
           E   +V  AL+ +Y KS  + +A  +F+ M  +D + W+ MI  YA     ++  ++F R
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHR 296

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           MR A V  ++  F + L+ C+    L+   Q+H  VV+ G      +  ALM  Y+KC  
Sbjct: 297 MRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSS 356

Query: 394 MENSVELFA-ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLR 452
           ++ + +LF+      N VTW  MI G+VQ     KA+ +F +M  E V     TYS+VL 
Sbjct: 357 VDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLA 416

Query: 453 A-CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEV 511
              +SL +     Q+H   +KA Y+    VA AL+D Y K G++ ++  VF  +   + V
Sbjct: 417 GKPSSLLS-----QLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIV 471

Query: 512 SWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSAC-SNGGLLEQGEAYFKS 570
           +W+AM++G +    S + ++VF  + + G +PN  TF  V++AC S+   +E G+    +
Sbjct: 472 AWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHAT 531

Query: 571 MVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKL 603
            V + G    +   ++++++  + G+++ A K+
Sbjct: 532 AVKS-GKSNALCVSSALLTMYSKKGNIESAEKV 563



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/424 (29%), Positives = 218/424 (51%), Gaps = 7/424 (1%)

Query: 198 LIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDT 257
           L D   +     + R +FD   N+   EAL+ F  + + G   +  T +  LK C  L  
Sbjct: 60  LFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFD 119

Query: 258 IRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIAR 317
             V +  H  +LK+ +  D+ V  +L+D+Y K+ +  + R IF+EM  K+V+ W+ +++ 
Sbjct: 120 QVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSG 179

Query: 318 YAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD 377
           YA+  L+ + + L  +M+   V PN FTF +VL A A    ++ G Q+H+++V+ G    
Sbjct: 180 YARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFT 239

Query: 378 VFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
            FV NAL+ +Y K   + ++  +F     R+ VTWN MI GY  +G   +   MF +M  
Sbjct: 240 TFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRL 299

Query: 438 EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITD 497
             V  +   + + L+ C+    L    Q+HC  VK  Y+    +  AL+  Y+KC S+ +
Sbjct: 300 AGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDE 359

Query: 498 ARLVFDMMN-DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS 556
           A  +F M +   N V+W AMI G+  +  + + + +F  M + G RPN+ T+  VL A  
Sbjct: 360 AFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVL-AGK 418

Query: 557 NGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIW 616
              LL Q  A  + + A Y   P +   T+++    + G++ ++A++   IP +  ++ W
Sbjct: 419 PSSLLSQLHA--QIIKAYYEKVPSVA--TALLDAYVKTGNVVESARVFYSIPAK-DIVAW 473

Query: 617 RALL 620
            A+L
Sbjct: 474 SAML 477



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 168/335 (50%), Gaps = 1/335 (0%)

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACAT 355
           A ++F+E P KD+  ++ ++  +++ +   +A+ LF  +  + +  +  T    L+ C  
Sbjct: 57  AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116

Query: 356 MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTM 415
           +    +G Q+H   ++ G L DV V  +L+D+Y K    E+   +F E   +N V+W ++
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176

Query: 416 IVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY 475
           + GY + G   + + + ++M  E V     T+++VL A A  + +E G+QVH + VK  +
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236

Query: 476 DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDL 535
           +    V NALI MY K   + DA  VFD M   + V+WN MI GY+  G   E  ++F  
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHR 296

Query: 536 MQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAG 595
           M+  G + +   F   L  CS    L   +     +V N G E   +  T+++    +  
Sbjct: 297 MRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKN-GYEFAQDIRTALMVTYSKCS 355

Query: 596 HLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
            +D+A KL        +V+ W A++G  + +NN E
Sbjct: 356 SVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNE 390


>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 989

 Score =  504 bits (1297), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 263/778 (33%), Positives = 417/778 (53%), Gaps = 27/778 (3%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  + AT L++C     L     +H Q  K G  LDLF  + L+++Y K   +  A+K+F
Sbjct: 212 NEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMF 271

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             MPE+N +++   + GY         + LF ++     + N F  T  LK   +    +
Sbjct: 272 IGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLK 331

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN----------DCF- 223
               + + + K G++ N F+G  L+D +S CG    A  VF  +             C  
Sbjct: 332 QGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLD 391

Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                EE++  F  MR     PN +T   +L A      ++  +S H C  K  +E D+ 
Sbjct: 392 QQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVA 451

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V+ AL+ +Y K+G + +  +++E M  +D+I W+  ++      +    + +F  M +  
Sbjct: 452 VSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEG 511

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
             PN +TF+S+L +C+ +  +  G Q+H+ +++  L  + FV  AL+D+YAKC  +E++ 
Sbjct: 512 FIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDAD 571

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
             F     R+  TW  +I  Y Q  +  KA+  F +M +E V   E T +  L  C+SLA
Sbjct: 572 VAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLA 631

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           +LE G Q+H +  K+ +  D+ V +AL+DMYAKCG + +A  +F+ +   + ++WN +I 
Sbjct: 632 SLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIIC 691

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           GY+ +G   + L  F +M   G  P+ +TF G+LSACS+ GL+E+G+ +F SM  ++GI 
Sbjct: 692 GYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGIS 751

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P ++H   MV +LGR G  D+    I+ +    + +IW  +LGA  +HNN+ +G  +A  
Sbjct: 752 PTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANK 811

Query: 639 ILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRA 687
           + + +PE+E++++LLSNI+A    W+           K   KEPG SW+E  G VH F +
Sbjct: 812 LFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVS 871

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFAL 747
            D SH  +  I   L+ L+ +     Y+P    VL +V E EK+  L  HSE+LAL FAL
Sbjct: 872 HDYSHPQIQEIHLKLDELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFAL 931

Query: 748 FKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
                   IRI KNLRIC DCH  +K IS I  +EI++RDV RFHHF++G CSC DFW
Sbjct: 932 ISTSSEKKIRIFKNLRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGACSCNDFW 989



 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 171/578 (29%), Positives = 273/578 (47%), Gaps = 18/578 (3%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           Y++ L+ C     L  A  IH  ++K     D      L+NVY K      A  +  +MP
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
           +R+ +S+   IQG        +++ LF  +  EG   N F     LK        +L   
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG-----------LFNDCFEEA- 226
           + A  +KLG   + FVG+AL+D ++ CG +E A K+F G           L N   +   
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294

Query: 227 ----LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
               L  F  M  +  K N FT   VLK C     ++  +  H   +K  YE + ++   
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCG 354

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+D+Y+K G   +A  +F+ + K D++ WS +I    Q   S ++++LF  MR     PN
Sbjct: 355 LVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPN 414

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           Q+T  S+L A      L  G  IH+ V + G  +DV VSNAL+ +Y K G + +  +L+ 
Sbjct: 415 QYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYE 474

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
               R+ ++WN  + G    G   + + +F  MLEE       T+ S+L +C+ L  +  
Sbjct: 475 SMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHY 534

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G QVH   +K   D +  V  ALIDMYAKC  + DA + F+ ++  +  +W  +I+ Y+ 
Sbjct: 535 GRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQ 594

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
                + L  F  MQQ G +PN  T  G LS CS+   LE G+    SMV   G    + 
Sbjct: 595 TNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQ-LHSMVFKSGHVSDMF 653

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
             +++V +  + G +++A  L E +  +   + W  ++
Sbjct: 654 VGSALVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTII 690


>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
 gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
          Length = 723

 Score =  504 bits (1297), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 264/720 (36%), Positives = 422/720 (58%), Gaps = 33/720 (4%)

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
           +R+ +S+   I  Y  + +  EA+  F  +   G   N + FT   +   +     L   
Sbjct: 4   KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63

Query: 179 VFACVYKLGH-DSNAFVGTALIDAF-SVCGCVEFARKVFDGLFNDCF------------- 223
           +F  + K G+ +S+  VG ALID F    G +E A KVFD + +                
Sbjct: 64  IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123

Query: 224 ---EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
               +A++ F  M   G+ P+ FT + V+ AC  +  + + +  H   +K+  ++D+ V 
Sbjct: 124 GFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVG 183

Query: 281 VALLDLYTK---SGEISNARRIFEEMPKKDVIPWSFMIARYAQTD-LSIDAVELFCRMRQ 336
            +L+D+Y K    G + +AR++F+ MP  +V+ W+ +I  Y Q+     +A+ELF  M Q
Sbjct: 184 CSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQ 243

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             V PN FTF SVL+ACA +  + LG Q+++LVV++ L S   V N+L+ +Y++CG MEN
Sbjct: 244 GQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMEN 303

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           + + F    ++N V++NT++  Y +     +A  +F+++          T++S+L   +S
Sbjct: 304 ARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASS 363

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           + A+  G Q+H   +K+ +  ++ + NALI MY++CG+I  A  VF+ M D N +SW +M
Sbjct: 364 IGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSM 423

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           I+G++ HG +   L+ F  M + G  PN +T++ VLSACS+ GL+ +G  +FKSM   +G
Sbjct: 424 ITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHG 483

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
           I P +EHY  +V LLGR+GHL++A +L+  +PF+   ++ R  LGAC +H N+++G+ +A
Sbjct: 484 IVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGKHAA 543

Query: 637 QHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYF 685
           + IL+ +P D A ++LLSN++A A  WE+ A           +KE G SWIE +  VH F
Sbjct: 544 EMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEVENKVHKF 603

Query: 686 RAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAF 745
             GDTSH     I   L+ L +K ++ GYIP    VL DV E++KE+YL+ HSEK+A+A+
Sbjct: 604 YVGDTSHPQAQEIYDELDQLALKIKELGYIPSTDFVLHDVEEEQKEQYLFQHSEKIAVAY 663

Query: 746 ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
                  S PIR+ KNLR+C DCHTA K  S + ++EI++RD +RFHHF+DG CSC D+W
Sbjct: 664 GFISTSTSRPIRVFKNLRVCGDCHTAFKYFSIVRRKEIVLRDANRFHHFKDGTCSCNDYW 723



 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 134/479 (27%), Positives = 242/479 (50%), Gaps = 33/479 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNV-----LLNVYVKLN-RLP 108
           N + +    ++C   +++     I   +LK G     F ++V     L++++VK N  L 
Sbjct: 41  NEYCFTGVFRACSNKENISLGKIIFGFLLKTG----YFESDVCVGCALIDMFVKGNGDLE 96

Query: 109 DATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLV 168
            A K+FD MP+RN +++   I  +       +AV LF  +   G+  + F  +  +    
Sbjct: 97  SAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACA 156

Query: 169 SMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVC---GCVEFARKVFDGL------- 218
            MG   L       V K G D +  VG +L+D ++ C   G V+ ARKVFD +       
Sbjct: 157 EMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMS 216

Query: 219 ----------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCA 268
                        C  EA+  F +M     KPN+FTF+ VLKAC  L  I + +  +   
Sbjct: 217 WTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALV 276

Query: 269 LKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAV 328
           +K        V  +L+ +Y++ G + NAR+ F+ + +K+++ ++ ++  YA++  S +A 
Sbjct: 277 VKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAF 336

Query: 329 ELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVY 388
           ELF  +  A    N FTF S+L   +++  +  G QIHS +++ G  S++ + NAL+ +Y
Sbjct: 337 ELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMY 396

Query: 389 AKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYS 448
           ++CG +E + ++F E    N ++W +MI G+ + G   +A+  F KMLE  V   EVTY 
Sbjct: 397 SRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYI 456

Query: 449 SVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDARLVFDMM 505
           +VL AC+ +  +  G++ H  ++K  + +   + +   ++D+  + G + +A  + + M
Sbjct: 457 AVLSACSHVGLISEGLK-HFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSM 514



 Score = 47.4 bits (111), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 2/118 (1%)

Query: 504 MMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQ 563
           M N  + VSW+A+IS Y+ +  + E +  F  M + G+ PN   F GV  ACSN   +  
Sbjct: 1   MGNKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISL 60

Query: 564 GEAYFKSMVANYGIEPCIEHYTSMVSLLGRA-GHLDKAAKLIEGIPFQPSVMIWRALL 620
           G+  F  ++     E  +    +++ +  +  G L+ A K+ + +P   +V+ W  ++
Sbjct: 61  GKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMP-DRNVVTWTLMI 117


>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
 gi|223942207|gb|ACN25187.1| unknown [Zea mays]
 gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 885

 Score =  504 bits (1297), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 285/807 (35%), Positives = 427/807 (52%), Gaps = 102/807 (12%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           ++   NV+LN Y KL RL DA +LF  MP R+  S+ T + GY  S Q++ ++  F ++H
Sbjct: 90  NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMH 149

Query: 150 REGHEL-NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCV 208
           R G    N F     +K   ++GW  L   + A V K     ++ V  AL+D F  CG V
Sbjct: 150 RSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAV 209

Query: 209 EFARKVFDG---------------------------LFNDCFE----------------- 224
           + A ++F                             LF+   E                 
Sbjct: 210 DLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSG 269

Query: 225 ---EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
              EAL+    M++ G + ++ T+   L AC  L ++R  K  H   ++    +D YVA 
Sbjct: 270 RVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVAS 329

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           AL++LY KSG    A+ +F  +  ++ + W+ +I+ + Q     ++VELF +MR   +  
Sbjct: 330 ALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTL 389

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           +QF   +++  C +   L LG Q+HSL ++ G +  V VSN+L+ +YAKC  ++++  +F
Sbjct: 390 DQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIF 449

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKA-------------------------------MI 430
               +++ V+W +MI  Y Q+G V KA                               + 
Sbjct: 450 RFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLR 509

Query: 431 MFSKML-EEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMY 489
           M+  ML EE V    VTY ++ + CA L A + G Q+   TVK    +D  VANA+I MY
Sbjct: 510 MYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMY 569

Query: 490 AKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFV 549
           +KCG I +AR VFD +N  + VSWNAMI+GYS HG+  + +++FD + +RG +P+ +++V
Sbjct: 570 SKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYV 629

Query: 550 GVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF 609
            VLS CS+ GL+++G+ YF  M   + I P +EH++ MV LLGRAGHL +A  LI+ +P 
Sbjct: 630 AVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPM 689

Query: 610 QPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-- 667
           +P+  +W ALL AC IH N E+  L+A+H+ + +  D  +++L++ IYA A   + +A  
Sbjct: 690 KPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQI 749

Query: 668 ---------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDL 718
                     K PG SW+E    VH F+A D SH  +  IR  L+ L  K  + GY    
Sbjct: 750 RKLMRDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGY---- 805

Query: 719 SAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKI 778
                 VR D     +  HSEKLA+AF L  +P   PI I+KNLRIC DCHT IK+IS +
Sbjct: 806 ------VRTDSTRSEIH-HSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIKLISTV 858

Query: 779 VQREIIIRDVHRFHHFQDGCCSCGDFW 805
             RE +IRD  RFHHF  G CSCGD+W
Sbjct: 859 TGREFVIRDAVRFHHFNGGSCSCGDYW 885



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 121/487 (24%), Positives = 211/487 (43%), Gaps = 105/487 (21%)

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR------ 298
           FA  L++C     +  A++ HG  +       +++   LL  Y   G +S+ARR      
Sbjct: 27  FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDI 86

Query: 299 --------------------------IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFC 332
                                     +F  MP +DV  W+ +++ Y Q+   + ++E F 
Sbjct: 87  AHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFL 146

Query: 333 RM-RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC 391
            M R     PN FT    +++C  +    L  Q+ ++V +     D  V+ AL+D++ +C
Sbjct: 147 SMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRC 206

Query: 392 GR-------------------------------MENSVELFAESPKRNHVTWNTMIVGYV 420
           G                                +++++ELF   P+R+ V+WN M+    
Sbjct: 207 GAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALS 266

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV 480
           Q G V +A+ M   M  + V     TY+S L ACA L++L  G Q+H   ++    +D  
Sbjct: 267 QSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPY 326

Query: 481 VANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG 540
           VA+AL+++YAK G   +A+ VF+ ++D N V+W  +ISG+  +G   E +++F+ M+   
Sbjct: 327 VASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAEL 386

Query: 541 WRPNNLTFVGVLSAC---------------------------SNGGL--------LEQGE 565
              +      ++S C                           SN  +        L+  E
Sbjct: 387 MTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAE 446

Query: 566 AYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACII 625
           A F+ M      E  I  +TSM++   + G++ KA +  +G+  + +V+ W A+LGA I 
Sbjct: 447 AIFRFMN-----EKDIVSWTSMITAYSQVGNVAKAREFFDGMS-EKNVITWNAMLGAYIQ 500

Query: 626 HNNVEIG 632
           H   E G
Sbjct: 501 HGAEEDG 507



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 86/414 (20%), Positives = 181/414 (43%), Gaps = 50/414 (12%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
             +S +Y +SL +C +   L+    +H QV++    +D +  + L+ +Y K     +A  
Sbjct: 287 RLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKG 346

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFL-----KVL 167
           +F+ + +RN +++   I G+     F E+V LF+ +  E   L+ FA    +     ++ 
Sbjct: 347 VFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMD 406

Query: 168 VSMGWAELCPCVFA--------------------------CVYKLGHDSNAFVGTALIDA 201
           + +G      C+ +                           +++  ++ +    T++I A
Sbjct: 407 LCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITA 466

Query: 202 FSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRAVGF-KPNNFT 244
           +S  G V  AR+ FDG+                 +   E+ L  +  M +  + +P+  T
Sbjct: 467 YSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVT 526

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
           +  + K C  L   ++     G  +K    +D  VA A++ +Y+K G I  AR++F+ + 
Sbjct: 527 YVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLN 586

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
            KD++ W+ MI  Y+Q  +   A+E+F  + +    P+  ++V+VL  C+    +  G  
Sbjct: 587 VKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKF 646

Query: 365 IHSLVVRVGLLSDVFVS-NALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMI 416
              ++ R   +S      + ++D+  + G +  + +L  + P K     W  ++
Sbjct: 647 YFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALL 700



 Score = 41.2 bits (95), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 3/100 (3%)

Query: 442 ATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR-- 499
           A    ++  LR+C +  AL     +H   V       V + N L+  Y  CG+++DAR  
Sbjct: 22  AVTQAFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRL 81

Query: 500 LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
           L+ D+ +  N ++ N M++GY+  G  ++ +++F  M  R
Sbjct: 82  LLMDIAHP-NVITHNVMLNGYAKLGRLSDAVELFGRMPAR 120


>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
          Length = 785

 Score =  504 bits (1297), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 278/778 (35%), Positives = 431/778 (55%), Gaps = 30/778 (3%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
           ++Y   L++CIQ+  L  A  IH   LK  +  D    + L  +Y+  N++  A +LFDE
Sbjct: 9   NNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDE 68

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
           +P  + I +   I+ Y  +  F  A+ L+ ++   G   N + +   LK    +   E  
Sbjct: 69  IPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG 128

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG-----------------LF 219
             + +     G +S+ FV TAL+D ++ CG +  A+++F                   L+
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLY 188

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
             C ++A+    QM+  G  PN+ T   VL        +   K+ HG  ++  ++  + V
Sbjct: 189 GLC-DDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVV 247

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM-RQAF 338
              LLD+Y K   +  AR+IF+ M  ++ + WS MI  Y  +D   +A+ELF +M  +  
Sbjct: 248 GTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDA 307

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           + P   T  SVL+ACA +  L  G ++H  ++++G + D+ + N L+ +YAKCG +++++
Sbjct: 308 MDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAI 367

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
             F     ++ V+++ ++ G VQ G    A+ +F  M    +     T   VL AC+ LA
Sbjct: 368 RFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLA 427

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           AL+ G   H   +   +  D ++ NALIDMY+KCG I+ AR VF+ M+  + VSWNAMI 
Sbjct: 428 ALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMII 487

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           GY +HGL  E L +F  +   G +P+++TF+ +LS+CS+ GL+ +G  +F +M  ++ I 
Sbjct: 488 GYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIV 547

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P +EH   MV +LGRAG +D+A   I  +PF+P V IW ALL AC IH N+E+G   ++ 
Sbjct: 548 PRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKK 607

Query: 639 ILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRA 687
           I    PE     VLLSNIY+ A  W+ AA            K PG SWIE  G+VH F  
Sbjct: 608 IQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVG 667

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFAL 747
           GD SH  ++ I   LE L ++ ++ GY  + S V +DV E+EKE+ L  HSEKLA+AF +
Sbjct: 668 GDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGI 727

Query: 748 FKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
             +    PI + KNLR+C DCH AIK ++ I +REI +RD +RFHHF++G C+CGDFW
Sbjct: 728 LNLKAGRPILVTKNLRVCGDCHAAIKFMTVITKREITVRDANRFHHFKNGTCNCGDFW 785



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 127/491 (25%), Positives = 234/491 (47%), Gaps = 25/491 (5%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N ++Y   L++C     ++  + IH      G   D+F    L++ Y K   L +A +LF
Sbjct: 108 NKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLF 167

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             M  R+ +++   I G ++     +AV L   +  EG  + P + T  + VL ++G A+
Sbjct: 168 SSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEG--ICPNSST-IVGVLPTVGEAK 224

Query: 175 LC---PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--GLFN--------- 220
                  +     +   D+   VGT L+D ++ C C+ +ARK+FD  G+ N         
Sbjct: 225 ALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIG 284

Query: 221 -----DCFEEALNFFSQM-RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
                DC +EAL  F QM       P   T   VL+AC  L  +   +  H   +K    
Sbjct: 285 GYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXV 344

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
           +D+ +   LL +Y K G I +A R F+ M  KD + +S +++   Q   +  A+ +F  M
Sbjct: 345 LDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMM 404

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
           + + + P+  T + VL AC+ +  L  G   H  ++  G  +D  + NAL+D+Y+KCG++
Sbjct: 405 QLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKI 464

Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
             + E+F    + + V+WN MI+GY   G   +A+ +F  +L   +   ++T+  +L +C
Sbjct: 465 SFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSC 524

Query: 455 A-SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVS 512
           + S   +E  +    ++   +    +     ++D+  + G I +A   + +M  + +   
Sbjct: 525 SHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRI 584

Query: 513 WNAMISGYSMH 523
           W+A++S   +H
Sbjct: 585 WSALLSACRIH 595


>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 865

 Score =  503 bits (1295), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 285/807 (35%), Positives = 427/807 (52%), Gaps = 102/807 (12%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           ++   NV+LN Y KL RL DA +LF  MP R+  S+ T + GY  S Q++ ++  F ++H
Sbjct: 70  NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMH 129

Query: 150 REGHEL-NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCV 208
           R G    N F     +K   ++GW  L   + A V K     ++ V  AL+D F  CG V
Sbjct: 130 RSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAV 189

Query: 209 EFARKVFDG---------------------------LFNDCFE----------------- 224
           + A ++F                             LF+   E                 
Sbjct: 190 DLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSG 249

Query: 225 ---EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
              EAL+    M++ G + ++ T+   L AC  L ++R  K  H   ++    +D YVA 
Sbjct: 250 RVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVAS 309

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           AL++LY KSG    A+ +F  +  ++ + W+ +I+ + Q     ++VELF +MR   +  
Sbjct: 310 ALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTL 369

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           +QF   +++  C +   L LG Q+HSL ++ G +  V VSN+L+ +YAKC  ++++  +F
Sbjct: 370 DQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIF 429

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKA-------------------------------MI 430
               +++ V+W +MI  Y Q+G V KA                               + 
Sbjct: 430 RFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLR 489

Query: 431 MFSKML-EEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMY 489
           M+  ML EE V    VTY ++ + CA L A + G Q+   TVK    +D  VANA+I MY
Sbjct: 490 MYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMY 549

Query: 490 AKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFV 549
           +KCG I +AR VFD +N  + VSWNAMI+GYS HG+  + +++FD + +RG +P+ +++V
Sbjct: 550 SKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYV 609

Query: 550 GVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF 609
            VLS CS+ GL+++G+ YF  M   + I P +EH++ MV LLGRAGHL +A  LI+ +P 
Sbjct: 610 AVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPM 669

Query: 610 QPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-- 667
           +P+  +W ALL AC IH N E+  L+A+H+ + +  D  +++L++ IYA A   + +A  
Sbjct: 670 KPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQI 729

Query: 668 ---------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDL 718
                     K PG SW+E    VH F+A D SH  +  IR  L+ L  K  + GY    
Sbjct: 730 RKLMRDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGY---- 785

Query: 719 SAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKI 778
                 VR D     +  HSEKLA+AF L  +P   PI I+KNLRIC DCHT IK+IS +
Sbjct: 786 ------VRTDSTRSEIH-HSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIKLISTV 838

Query: 779 VQREIIIRDVHRFHHFQDGCCSCGDFW 805
             RE +IRD  RFHHF  G CSCGD+W
Sbjct: 839 TGREFVIRDAVRFHHFNGGSCSCGDYW 865



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 121/487 (24%), Positives = 211/487 (43%), Gaps = 105/487 (21%)

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR------ 298
           FA  L++C     +  A++ HG  +       +++   LL  Y   G +S+ARR      
Sbjct: 7   FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDI 66

Query: 299 --------------------------IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFC 332
                                     +F  MP +DV  W+ +++ Y Q+   + ++E F 
Sbjct: 67  AHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFL 126

Query: 333 RM-RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC 391
            M R     PN FT    +++C  +    L  Q+ ++V +     D  V+ AL+D++ +C
Sbjct: 127 SMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRC 186

Query: 392 GR-------------------------------MENSVELFAESPKRNHVTWNTMIVGYV 420
           G                                +++++ELF   P+R+ V+WN M+    
Sbjct: 187 GAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALS 246

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV 480
           Q G V +A+ M   M  + V     TY+S L ACA L++L  G Q+H   ++    +D  
Sbjct: 247 QSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPY 306

Query: 481 VANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG 540
           VA+AL+++YAK G   +A+ VF+ ++D N V+W  +ISG+  +G   E +++F+ M+   
Sbjct: 307 VASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAEL 366

Query: 541 WRPNNLTFVGVLSAC---------------------------SNGGL--------LEQGE 565
              +      ++S C                           SN  +        L+  E
Sbjct: 367 MTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAE 426

Query: 566 AYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACII 625
           A F+ M      E  I  +TSM++   + G++ KA +  +G+  + +V+ W A+LGA I 
Sbjct: 427 AIFRFMN-----EKDIVSWTSMITAYSQVGNVAKAREFFDGMS-EKNVITWNAMLGAYIQ 480

Query: 626 HNNVEIG 632
           H   E G
Sbjct: 481 HGAEEDG 487



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/414 (20%), Positives = 181/414 (43%), Gaps = 50/414 (12%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
             +S +Y +SL +C +   L+    +H QV++    +D +  + L+ +Y K     +A  
Sbjct: 267 RLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKG 326

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFL-----KVL 167
           +F+ + +RN +++   I G+     F E+V LF+ +  E   L+ FA    +     ++ 
Sbjct: 327 VFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMD 386

Query: 168 VSMGWAELCPCVFA--------------------------CVYKLGHDSNAFVGTALIDA 201
           + +G      C+ +                           +++  ++ +    T++I A
Sbjct: 387 LCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITA 446

Query: 202 FSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRAVGF-KPNNFT 244
           +S  G V  AR+ FDG+                 +   E+ L  +  M +  + +P+  T
Sbjct: 447 YSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVT 506

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
           +  + K C  L   ++     G  +K    +D  VA A++ +Y+K G I  AR++F+ + 
Sbjct: 507 YVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLN 566

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
            KD++ W+ MI  Y+Q  +   A+E+F  + +    P+  ++V+VL  C+    +  G  
Sbjct: 567 VKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKF 626

Query: 365 IHSLVVRVGLLSDVFVS-NALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMI 416
              ++ R   +S      + ++D+  + G +  + +L  + P K     W  ++
Sbjct: 627 YFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALL 680



 Score = 40.8 bits (94), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 3/100 (3%)

Query: 442 ATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR-- 499
           A    ++  LR+C +  AL     +H   V       V + N L+  Y  CG+++DAR  
Sbjct: 2   AVTQAFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRL 61

Query: 500 LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
           L+ D+ +  N ++ N M++GY+  G  ++ +++F  M  R
Sbjct: 62  LLMDIAHP-NVITHNVMLNGYAKLGRLSDAVELFGRMPAR 100


>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Glycine max]
          Length = 647

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 251/579 (43%), Positives = 359/579 (62%), Gaps = 12/579 (2%)

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR 297
            +P+   +  +LK C  L  ++  K  H   L + ++ DL +  +LL +Y + G +  AR
Sbjct: 70  LEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGAR 129

Query: 298 RIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATME 357
           R+F+EMP +D++ W+ MI  YAQ D + DA+ LF RM      PN+FT  S+++ C  M 
Sbjct: 130 RLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMA 189

Query: 358 GLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIV 417
             + G QIH+   + G  S+VFV ++L+D+YA+CG +  ++ +F +   +N V+WN +I 
Sbjct: 190 SYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIA 249

Query: 418 GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM 477
           GY + GE  +A+ +F +M  E    TE TYS++L +C+S+  LE G  +H   +K++  +
Sbjct: 250 GYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKL 309

Query: 478 DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQ 537
              V N L+ MYAK GSI DA  VFD +   + VS N+M+ GY+ HGL  E  + FD M 
Sbjct: 310 VGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMI 369

Query: 538 QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHL 597
           + G  PN++TF+ VL+ACS+  LL++G+ YF  ++  Y IEP + HY ++V LLGRAG L
Sbjct: 370 RFGIEPNDITFLSVLTACSHARLLDEGKHYF-GLMRKYNIEPKVSHYATIVDLLGRAGLL 428

Query: 598 DKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIY 657
           D+A   IE +P +P+V IW ALLGA  +H N E+G  +AQ + + +P    TH LL+NIY
Sbjct: 429 DQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLLANIY 488

Query: 658 AMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLN 706
           A A  WE  A            KEP  SW+E +  VH F A D +H     I  M E LN
Sbjct: 489 ASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKIHKMWEKLN 548

Query: 707 MKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICV 766
            K ++ GY+PD S VL  V + EKE  L  HSEKLAL+FAL   PP S IRI+KN+R+C 
Sbjct: 549 QKIKEIGYVPDTSHVLLFVDQQEKELNLQYHSEKLALSFALLNTPPGSTIRIMKNIRVCG 608

Query: 767 DCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           DCH+AIK +S +V+REII+RD +RFHHF DG CSCGD+W
Sbjct: 609 DCHSAIKYVSLVVKREIIVRDTNRFHHFCDGFCSCGDYW 647



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 179/363 (49%), Gaps = 16/363 (4%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           Y T L+ C Q   L+    +H  VL      DL   N LL +Y +   L  A +LFDEMP
Sbjct: 77  YNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRLFDEMP 136

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
            R+ +S+ + I GY  + +  +A+ LF  +  +G E N F  ++ +K    M        
Sbjct: 137 HRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQ 196

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--GLFNDCF------------- 223
           + AC +K G  SN FVG++L+D ++ CG +  A  VFD  G  N+               
Sbjct: 197 IHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGE 256

Query: 224 -EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
            EEAL  F +M+  G++P  FT++ +L +C  +  +   K  H   +K+  ++  YV   
Sbjct: 257 GEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNT 316

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           LL +Y KSG I +A ++F+++ K DV+  + M+  YAQ  L  +A + F  M +  + PN
Sbjct: 317 LLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPN 376

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
             TF+SVL AC+    LD G     L+ +  +   V     ++D+  + G ++ +     
Sbjct: 377 DITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIE 436

Query: 403 ESP 405
           E P
Sbjct: 437 EMP 439



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 178/347 (51%), Gaps = 17/347 (4%)

Query: 194 VGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVG 237
           +  +L+  ++ CG +E AR++FD +                 ND   +AL  F +M + G
Sbjct: 111 IQNSLLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDG 170

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR 297
            +PN FT + ++K C  + +    +  H C  K     +++V  +L+D+Y + G +  A 
Sbjct: 171 AEPNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAM 230

Query: 298 RIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATME 357
            +F+++  K+ + W+ +IA YA+     +A+ LF RM++    P +FT+ ++L +C++M 
Sbjct: 231 LVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMG 290

Query: 358 GLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIV 417
            L+ G  +H+ +++       +V N L+ +YAK G + ++ ++F +  K + V+ N+M++
Sbjct: 291 CLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLI 350

Query: 418 GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM 477
           GY Q G   +A   F +M+   +   ++T+ SVL AC+    L+ G     L  K N + 
Sbjct: 351 GYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEP 410

Query: 478 DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS-WNAMISGYSMH 523
            V     ++D+  + G +  A+   + M     V+ W A++    MH
Sbjct: 411 KVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMH 457



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 121/282 (42%), Gaps = 17/282 (6%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           +E N  + ++ ++ C           IH    K G   ++F  + L+++Y +   L +A 
Sbjct: 171 AEPNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAM 230

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
            +FD++  +N +S+   I GY    +  EA+ LF  + REG+    F ++A L    SMG
Sbjct: 231 LVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMG 290

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------------ 219
             E    + A + K       +VG  L+  ++  G +  A KVFD L             
Sbjct: 291 CLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLI 350

Query: 220 ----NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
               +   +EA   F +M   G +PN+ TF  VL AC     +   K   G   K   E 
Sbjct: 351 GYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEP 410

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
            +     ++DL  ++G +  A+   EEMP +  V  W  ++ 
Sbjct: 411 KVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLG 452


>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Glycine max]
          Length = 1135

 Score =  502 bits (1293), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 304/847 (35%), Positives = 454/847 (53%), Gaps = 74/847 (8%)

Query: 24   WLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVL 83
            W+  L +Q   S+ + + ST   +  + +  ++ ++   L++     DL     IH  V 
Sbjct: 298  WIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQIHAHVF 357

Query: 84   KKGNCL--DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEA 141
            K G+     +   N L+N+Y K   L  A ++FD++P+R+ +S+ + I       ++  +
Sbjct: 358  KFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELS 417

Query: 142  VGLFSTLHREGHELNPFAFTAFLKVLVSM--------GWAELCPCVFACVYKLGHDSNAF 193
            + LF  +  E   ++P +FT     LVS+        G   L   V A   + G D   +
Sbjct: 418  LHLFRLMLSE--NVDPTSFT-----LVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTY 469

Query: 194  VGTALIDAFSVCGCVEFARKVFDGLF-----------------NDCFEEALNFFSQMRAV 236
               AL+  ++  G V  A+ +F G+F                 ND FEEAL +   M   
Sbjct: 470  TNNALVTMYARLGRVNDAKALF-GVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVD 528

Query: 237  GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD-LYVAVALLDLYTKSGEISN 295
            G +P+  T A VL AC  L+ +R+ +  H  AL+    ++  +V  AL+D+Y    +   
Sbjct: 529  GVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKK 588

Query: 296  ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQACA 354
             R +F+ + ++ V  W+ ++A YA+ +    A+ LF  M  ++   PN  TF SVL AC 
Sbjct: 589  GRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACV 648

Query: 355  TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
              +       IH  +V+ G   D +V NALMD+Y++ GR+E S  +F    KR+ V+WNT
Sbjct: 649  RCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNT 708

Query: 415  MIVGYVQLGEVGKAMIMFSKMLEEQ----------------VP--ATEVTYSSVLRACAS 456
            MI G +  G    A+ +  +M   Q                VP     VT  +VL  CA+
Sbjct: 709  MITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAA 768

Query: 457  LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
            LAAL  G ++H   VK    MDV V +AL+DMYAKCG +  A  VFD M   N ++WN +
Sbjct: 769  LAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVL 828

Query: 517  ISGYSMHGLSAEVLKVFDLMQQRGW------RPNNLTFVGVLSACSNGGLLEQGEAYFKS 570
            I  Y MHG   E L++F +M   G       RPN +T++ + +ACS+ G++++G   F +
Sbjct: 829  IMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHT 888

Query: 571  MVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQ-PSVMIWRALLGACIIHNNV 629
            M A++G+EP  +HY  +V LLGR+G + +A +LI  +P     V  W +LLGAC IH +V
Sbjct: 889  MKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSV 948

Query: 630  EIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKA-----------ASKEPGLSWIEN 678
            E G ++A+H+   EP   + +VL+SNIY+ A  W++A             KEPG SWIE+
Sbjct: 949  EFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWIEH 1008

Query: 679  QGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHS 738
               VH F +GD SH     +   LE L+ + RK GY+PD+S VL +V ++EKE  L  HS
Sbjct: 1009 GDEVHKFLSGDASHPQSKELHEYLETLSQRMRKEGYVPDISCVLHNVDDEEKETMLCGHS 1068

Query: 739  EKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGC 798
            E+LA+AF L   PP + IR+ KNLR+C DCH A KIISKIV REII+RDV RFHHF +G 
Sbjct: 1069 ERLAIAFGLLNTPPGTTIRVAKNLRVCNDCHVATKIISKIVDREIILRDVRRFHHFANGT 1128

Query: 799  CSCGDFW 805
            CSCGD+W
Sbjct: 1129 CSCGDYW 1135



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 146/552 (26%), Positives = 265/552 (48%), Gaps = 44/552 (7%)

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
            R+   ++  ++  T SS F +A+  ++ +       + FAF A LK   ++    L   
Sbjct: 292 RRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQ 351

Query: 179 VFACVYKLGH--DSNAFVGTALIDAFSVCGCVEFARKVFDGLFND------------C-F 223
           + A V+K GH   S+  V  +L++ +  CG +  AR+VFD + +             C F
Sbjct: 352 IHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRF 411

Query: 224 EE---ALNFFSQMRAVGFKPNNFTFAFVLKACLGL-DTIRVAKSAHGCALKTCYEMDLYV 279
           EE   +L+ F  M +    P +FT   V  AC  +   +R+ K  H   L+   ++  Y 
Sbjct: 412 EEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYT 470

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
             AL+ +Y + G +++A+ +F     KD++ W+ +I+  +Q D   +A+     M    V
Sbjct: 471 NNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGV 530

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG-LLSDVFVSNALMDVYAKCGRMENSV 398
            P+  T  SVL AC+ +E L +G +IH   +R G L+ + FV  AL+D+Y  C + +   
Sbjct: 531 RPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGR 590

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML-EEQVPATEVTYSSVLRACASL 457
            +F    +R    WN ++ GY +     +A+ +F +M+ E +      T++SVL AC   
Sbjct: 591 LVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRC 650

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
                   +H   VK  +  D  V NAL+DMY++ G +  ++ +F  MN  + VSWN MI
Sbjct: 651 KVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMI 710

Query: 518 SGYSMHGLSAEVLKVFDLMQQR------------------GWRPNNLTFVGVLSACSNGG 559
           +G  + G   + L +   MQ+R                   ++PN++T + VL  C+   
Sbjct: 711 TGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALA 770

Query: 560 LLEQG-EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRA 618
            L +G E +  ++     ++  +   +++V +  + G L+ A+++ + +P + +V+ W  
Sbjct: 771 ALGKGKEIHAYAVKQKLAMDVAVG--SALVDMYAKCGCLNLASRVFDQMPIR-NVITWNV 827

Query: 619 LLGACIIHNNVE 630
           L+ A  +H   E
Sbjct: 828 LIMAYGMHGKGE 839


>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  502 bits (1293), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 279/764 (36%), Positives = 416/764 (54%), Gaps = 33/764 (4%)

Query: 71  DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQ 130
           D      +HCQ LK G   D+     L+++Y+K     D   +FDEM  +N +S+ + + 
Sbjct: 119 DQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLS 178

Query: 131 GYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDS 190
           GY  +    E + L + +  EG   N F F   L  L      E    V A + K G + 
Sbjct: 179 GYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEF 238

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFDGLF-NDC---------------FEEALNFFSQMR 234
             FV  ALI  +     V  A  VFD +   D                + E    F +MR
Sbjct: 239 TTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMR 298

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
             G K +   F   LK C     +   K  H   +K  YE    +  AL+  Y+K   + 
Sbjct: 299 LAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVD 358

Query: 295 NARRIFEEM-PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
            A ++F       +V+ W+ MI  + Q + +  AV+LFC+M +  V PN FT+ +VL   
Sbjct: 359 EAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGK 418

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
            +     L +Q+H+ +++        V+ AL+D Y K G +  S  +F   P ++ V W+
Sbjct: 419 PS----SLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWS 474

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA-LEPGMQVHCLTVK 472
            M+ G  Q  +  KAM +F ++++E V   E T+SSV+ AC+S AA +E G Q+H   VK
Sbjct: 475 AMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVK 534

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
           +     + V++AL+ MY+K G+I  A  VF    + + VSWN+MI+GY  HG + + L+V
Sbjct: 535 SGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEV 594

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
           F +MQ +G   +++TF+GVL+AC++ GL+E+GE YF  M+ +Y I+   EHY+ MV L  
Sbjct: 595 FQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYS 654

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVL 652
           RAG  DKA  +I G+PF  S  IWR LL AC +H N+E+G+L+A+ ++  +P D   +VL
Sbjct: 655 RAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVL 714

Query: 653 LSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGM 701
           LSNI+A+A +WE+ A            KE G SWIE +  +  F AGD SH   +++   
Sbjct: 715 LSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAK 774

Query: 702 LEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKN 761
           LE L++K +  GY PD + V  DV E+ KE  L  HSE+LA+A+ L  +PP +PI+I KN
Sbjct: 775 LEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPGAPIQIEKN 834

Query: 762 LRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           LRIC DCH  I++IS I +R +I+RD +RFHHF+ G CSCG +W
Sbjct: 835 LRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 137/471 (29%), Positives = 240/471 (50%), Gaps = 25/471 (5%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  ++AT L +      ++  + +H  ++K G     F  N L+ +Y+K   + DA  +F
Sbjct: 204 NGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVF 263

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D M  R+++++   I GY     ++E   +F  +   G +L+   F   LK+        
Sbjct: 264 DSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELN 323

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GLF 219
               +   V K G++    + TAL+  +S C  V+ A K+F                G F
Sbjct: 324 FTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGF 383

Query: 220 --NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
             N+  ++A++ F QM   G +PN+FT++ VL          +    H   +K  YE   
Sbjct: 384 VQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAG----KPSSLLSQLHAQIIKAYYEKVP 439

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
            VA ALLD Y K+G +  + R+F  +P KD++ WS M+   AQT  S  A+E+F ++ + 
Sbjct: 440 SVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKE 499

Query: 338 FVAPNQFTFVSVLQACATMEG-LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
            V PN++TF SV+ AC++    ++ G QIH+  V+ G  + + VS+AL+ +Y+K G +E+
Sbjct: 500 GVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIES 559

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           + ++F    +R+ V+WN+MI GY Q G+  KA+ +F  M  + +P  +VT+  VL AC  
Sbjct: 560 AEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTH 619

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDARLVFDMM 505
              +E G +   + +K +Y +D    +   ++D+Y++ G    A  + + M
Sbjct: 620 AGLVEEGEKYFNIMIK-DYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGM 669



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 145/513 (28%), Positives = 249/513 (48%), Gaps = 25/513 (4%)

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A +LFDE P ++   +   +  ++ ++   EA+ LF  LH  G  ++    +  LKV   
Sbjct: 57  AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------- 218
           +    +   V     K G   +  VGT+L+D +      E  R +FD +           
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176

Query: 219 -----FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY 273
                 N   +E ++  +QM+  G  PN FTFA VL A      I      H   +K  +
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
           E   +V  AL+ +Y KS  + +A  +F+ M  +D + W+ MI  YA     ++  ++F R
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHR 296

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           MR A V  ++  F + L+ C+    L+   Q+H  VV+ G      +  ALM  Y+KC  
Sbjct: 297 MRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSS 356

Query: 394 MENSVELFA-ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLR 452
           ++ + +LF+      N VTW  MI G+VQ     KA+ +F +M  E V     TYS+VL 
Sbjct: 357 VDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLA 416

Query: 453 A-CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEV 511
              +SL +     Q+H   +KA Y+    VA AL+D Y K G++ ++  VF  +   + V
Sbjct: 417 GKPSSLLS-----QLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIV 471

Query: 512 SWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSAC-SNGGLLEQGEAYFKS 570
           +W+AM++G +    S + ++VF  + + G +PN  TF  V++AC S+   +E G+    +
Sbjct: 472 AWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHAT 531

Query: 571 MVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKL 603
            V + G    +   ++++++  + G+++ A K+
Sbjct: 532 AVKS-GKSNALCVSSALLTMYSKKGNIESAEKV 563



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/424 (29%), Positives = 218/424 (51%), Gaps = 7/424 (1%)

Query: 198 LIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDT 257
           L D   +     + R +FD   N+   EAL+ F  + + G   +  T +  LK C  L  
Sbjct: 60  LFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFD 119

Query: 258 IRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIAR 317
             V +  H  +LK+ +  D+ V  +L+D+Y K+ +  + R IF+EM  K+V+ W+ +++ 
Sbjct: 120 QVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSG 179

Query: 318 YAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD 377
           YA+  L+ + + L  +M+   V PN FTF +VL A A    ++ G Q+H+++V+ G    
Sbjct: 180 YARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFT 239

Query: 378 VFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
            FV NAL+ +Y K   + ++  +F     R+ VTWN MI GY  +G   +   MF +M  
Sbjct: 240 TFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRL 299

Query: 438 EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITD 497
             V  +   + + L+ C+    L    Q+HC  VK  Y+    +  AL+  Y+KC S+ +
Sbjct: 300 AGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDE 359

Query: 498 ARLVFDMMN-DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS 556
           A  +F M +   N V+W AMI G+  +  + + + +F  M + G RPN+ T+  VL A  
Sbjct: 360 AFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVL-AGK 418

Query: 557 NGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIW 616
              LL Q  A  + + A Y   P +   T+++    + G++ ++A++   IP +  ++ W
Sbjct: 419 PSSLLSQLHA--QIIKAYYEKVPSVA--TALLDAYVKTGNVVESARVFYSIPAK-DIVAW 473

Query: 617 RALL 620
            A+L
Sbjct: 474 SAML 477



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 167/333 (50%), Gaps = 1/333 (0%)

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACAT 355
           A ++F+E P KD+  ++ ++  +++ +   +A+ LF  +  + +  +  T    L+ C  
Sbjct: 57  AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116

Query: 356 MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTM 415
           +    +G Q+H   ++ G L DV V  +L+D+Y K    E+   +F E   +N V+W ++
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176

Query: 416 IVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY 475
           + GY + G   + + + ++M  E V     T+++VL A A  + +E G+QVH + VK  +
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236

Query: 476 DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDL 535
           +    V NALI MY K   + DA  VFD M   + V+WN MI GY+  G   E  ++F  
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHR 296

Query: 536 MQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAG 595
           M+  G + +   F   L  CS    L   +     +V N G E   +  T+++    +  
Sbjct: 297 MRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKN-GYEFAQDIRTALMVTYSKCS 355

Query: 596 HLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
            +D+A KL        +V+ W A++G  + +NN
Sbjct: 356 SVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNN 388


>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 268/781 (34%), Positives = 431/781 (55%), Gaps = 31/781 (3%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           S    H  A  L+ C    +L   + +   V+K G   +      L++++ K   + +A 
Sbjct: 45  SHVYKHPAAVLLELCTSMKELHQIIPL---VIKNGLYNEHLFQTKLVSLFSKYGSINEAA 101

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
           ++F+ + ++    + T ++GY  +S    A+     +  +  +   + FT  LKV     
Sbjct: 102 RVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNA 161

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--------------- 216
             +    +   +      +N F  T +++ ++ C  ++ A K+FD               
Sbjct: 162 DLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIA 221

Query: 217 GLFNDCF-EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
           G   + F ++AL    +M+  G +P++ T   VL A   +  + V KS HG A++  +  
Sbjct: 222 GFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAK 281

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
            + ++ AL D+Y+K G +  AR IF+ M +K V+ W+ M+  Y Q      A+ +F +M 
Sbjct: 282 LVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKML 341

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
           +  + P   T +  L ACA +  L+ G  +H  V ++ L SD+ V N+L+ +Y+KC R++
Sbjct: 342 EEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVD 401

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
            + ++F     R HV+WN MI+GY Q G V +A+  FS+M    +     T  SV+ A A
Sbjct: 402 IASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALA 461

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
            L+       +H L +++  D ++ V  AL+DMY+KCG+I  AR +FDM++D + ++WNA
Sbjct: 462 ELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNA 521

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           MI GY  HGL    L +FD M++    PN++T++ V+SACS+ GL+++G  +FKSM  +Y
Sbjct: 522 MIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDY 581

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS 635
           G+EP ++HY +MV LLGRAG + +A   IE +P  P + ++ A+LGAC IH N+E+G  +
Sbjct: 582 GLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKA 641

Query: 636 AQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHY 684
           A+ + +  P++   HVLL+NIYA    W K A            K PG S +E +  VH 
Sbjct: 642 AKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHS 701

Query: 685 FRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALA 744
           F +G T+H     I   LE L  + + AGY+PD + +L DV +D +E+ L  HSEKLA+A
Sbjct: 702 FYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIA 760

Query: 745 FALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
           F L    P + I + KNLR+C DCH A K IS +  REII+RD+ RFHHF++G CSCGD+
Sbjct: 761 FGLLNTSPGTTIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDY 820

Query: 805 W 805
           W
Sbjct: 821 W 821


>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 261/623 (41%), Positives = 376/623 (60%), Gaps = 43/623 (6%)

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           A++F+ +M   G +PN++TF F+LK+C  +   +  K  HG  LK   E D +V  +L++
Sbjct: 116 AIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLIN 175

Query: 286 LYTKSGEIS-------------------------------NARRIFEEMPKKDVIPWSFM 314
           +Y ++GE+                                +ARR+FEE+P +D + W+ M
Sbjct: 176 MYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAM 235

Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL 374
           IA YAQ+    +A+  F  M++A VAPN+ T V+VL ACA    L+LGN + S +   GL
Sbjct: 236 IAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGL 295

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
            S++ + NAL+D+Y+KCG ++ + +LF    +++ ++WN MI GY  +    +A+ +F K
Sbjct: 296 GSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRK 355

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM-DVVVANALIDMYAKCG 493
           M +  V   +VT+ S+L ACA L AL+ G  +H    K    + +  +  +LIDMYAKCG
Sbjct: 356 MQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCG 415

Query: 494 SITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLS 553
           +I  A+ VF  M   +  SWNAMISG +MHG +   L++F  M+  G+ P+++TFVGVLS
Sbjct: 416 NIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLS 475

Query: 554 ACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSV 613
           ACS+ GL+E G   F SMV +Y I P ++HY  M+ LLGRAG  D+A  L++ +  +P  
Sbjct: 476 ACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDG 535

Query: 614 MIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW---------- 663
            IW +LLGAC +H NVE+G  +A+H+ + EPE+   +VLLSNIYA A  W          
Sbjct: 536 AIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKL 595

Query: 664 -EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVL 722
            +K   K PG S IE   +VH F  GD  H     I  ML+ ++    KAG++PD S VL
Sbjct: 596 NDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLEKAGHVPDTSEVL 655

Query: 723 RDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQRE 782
            D+ E+ KE  L  HSEKLA+AF L    P + IRI+KNLR+C +CH+AIK+ISKI  RE
Sbjct: 656 YDMDEEWKEGSLSHHSEKLAIAFGLISTKPETTIRIVKNLRVCGNCHSAIKLISKIFNRE 715

Query: 783 IIIRDVHRFHHFQDGCCSCGDFW 805
           II RD +RFHHF+DG CSC D+W
Sbjct: 716 IIARDRNRFHHFKDGSCSCMDYW 738



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 146/524 (27%), Positives = 244/524 (46%), Gaps = 57/524 (10%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLN--VYVKLNRLPDAT 111
             +H   T L +C      Q    IH Q++K G     FA + L+          L  A 
Sbjct: 30  LQNHPSLTLLSTC---KSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYAL 86

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
            LF+ + + N   + T I+G ++SS  V A+  +  +   G E N + F   LK    +G
Sbjct: 87  LLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVG 146

Query: 172 WAELCPCVFACVYKLGHDSNAFVG-------------------------------TALID 200
             +    +   V KLG +S+ FV                                TALI 
Sbjct: 147 ATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALIT 206

Query: 201 AFSVCGCVEFARKVFDGL-FNDC---------------FEEALNFFSQMRAVGFKPNNFT 244
            +++ GC++ AR++F+ +   D                FEEAL FF +M+     PN  T
Sbjct: 207 GYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNEST 266

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
              VL AC    ++ +               +L +  AL+D+Y+K G++  AR +FE + 
Sbjct: 267 MVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGIC 326

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
           +KD+I W+ MI  Y+  +   +A+ LF +M+Q+ V PN  TFVS+L ACA +  LDLG  
Sbjct: 327 EKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKW 386

Query: 365 IHSLVVRVGL-LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
           IH+ + +  L L++  +  +L+D+YAKCG +E + ++FA    ++  +WN MI G    G
Sbjct: 387 IHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHG 446

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN 483
               A+ +F +M +E     ++T+  VL AC+    +E G Q     V+ +YD+   + +
Sbjct: 447 HANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVE-DYDISPKLQH 505

Query: 484 --ALIDMYAKCGSITDAR-LVFDMMNDWNEVSWNAMISGYSMHG 524
              +ID+  + G   +A  L+ +M    +   W +++    +HG
Sbjct: 506 YGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHG 549



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 121/420 (28%), Positives = 202/420 (48%), Gaps = 36/420 (8%)

Query: 262 KSAHGCALKTCYEMDLYVAVALLDLYTKS--GEISNARRIFEEMPKKDVIPWSFMIARYA 319
           K  H   +KT      +    L++    S  G +S A  +FE + + +   W+ MI   +
Sbjct: 49  KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNS 108

Query: 320 QTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVF 379
            +   + A++ + RM    V PN +TF  +L++CA +     G QIH  V+++GL SD F
Sbjct: 109 LSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPF 168

Query: 380 VSNALMDVYAKCGRM-------------------------------ENSVELFAESPKRN 408
           V  +L+++YA+ G +                               +++  LF E P R+
Sbjct: 169 VHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRD 228

Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHC 468
            V+WN MI GY Q G   +A+  F +M    V   E T  +VL ACA   +LE G  V  
Sbjct: 229 AVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRS 288

Query: 469 LTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAE 528
                    ++ + NALIDMY+KCG +  AR +F+ + + + +SWN MI GYS      E
Sbjct: 289 WIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKE 348

Query: 529 VLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMV 588
            L +F  MQQ    PN++TFV +L AC+  G L+ G+     +   +        +TS++
Sbjct: 349 ALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLI 408

Query: 589 SLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD--FEPED 646
            +  + G+++ A ++  G+  + S+  W A++    +H +  +     + + D  FEP+D
Sbjct: 409 DMYAKCGNIEAAKQVFAGMKPK-SLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDD 467



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 195/453 (43%), Gaps = 58/453 (12%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRL----- 107
           E NS+++   L+SC +    Q    IH  VLK G   D F    L+N+Y +   L     
Sbjct: 129 EPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAEL 188

Query: 108 --------------------------PDATKLFDEMPERNTISFVTTIQGYTVSSQFVEA 141
                                      DA +LF+E+P R+ +S+   I GY  S +F EA
Sbjct: 189 VFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEA 248

Query: 142 VGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDA 201
           +  F  + R     N       L      G  EL   V + +   G  SN  +  ALID 
Sbjct: 249 LAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDM 308

Query: 202 FSVCGCVEFARKVFDGLFN----------------DCFEEALNFFSQMRAVGFKPNNFTF 245
           +S CG ++ AR +F+G+                  + ++EAL  F +M+    +PN+ TF
Sbjct: 309 YSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTF 368

Query: 246 AFVLKACLGLDTIRVAKSAHGCALKTCYEM-DLYVAVALLDLYTKSGEISNARRIFEEMP 304
             +L AC  L  + + K  H    K    + +  +  +L+D+Y K G I  A+++F  M 
Sbjct: 369 VSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMK 428

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
            K +  W+ MI+  A    +  A+ELF +MR     P+  TFV VL AC+    ++LG Q
Sbjct: 429 PKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQ 488

Query: 365 -IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTM-----IV 417
              S+V    +   +     ++D+  + G  + +  L      K +   W ++     + 
Sbjct: 489 CFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVH 548

Query: 418 GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
           G V+LGE   A  +F   LE + P   V  S++
Sbjct: 549 GNVELGEFA-AKHLFE--LEPENPGAYVLLSNI 578


>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Vitis vinifera]
          Length = 681

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 256/647 (39%), Positives = 382/647 (59%), Gaps = 28/647 (4%)

Query: 187 GHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFF 230
           G+    F+   L++ +S CG ++ A K+FD +                 N  F EA+  F
Sbjct: 35  GYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTF 94

Query: 231 SQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKS 290
             MR  G  P  F F+  ++AC  L +I + K  H  ALK     +L+V   L D+Y+K 
Sbjct: 95  CGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKC 154

Query: 291 GEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVL 350
           G + +A ++FEEMP KD + W+ MI  Y++     +A+  F +M    V  +Q    S L
Sbjct: 155 GAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTL 214

Query: 351 QACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA-ESPKRNH 409
            AC  ++    G  +HS VV++G  SD+FV NAL D+Y+K G ME++  +F  +S  RN 
Sbjct: 215 GACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNV 274

Query: 410 VTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCL 469
           V++  +I GYV+  ++ K + +F ++  + +   E T+SS+++ACA+ AALE G Q+H  
Sbjct: 275 VSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQ 334

Query: 470 TVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEV 529
            +K N+D D  V++ L+DMY KCG +  A   FD + D  E++WN+++S +  HGL  + 
Sbjct: 335 VMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDA 394

Query: 530 LKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVS 589
           +K+F+ M  RG +PN +TF+ +L+ CS+ GL+E+G  YF SM   YG+ P  EHY+ ++ 
Sbjct: 395 IKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVID 454

Query: 590 LLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEAT 649
           LLGRAG L +A + I  +PF+P+   W + LGAC IH + E+G+L+A+ ++  EP++   
Sbjct: 455 LLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGA 514

Query: 650 HVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNII 698
            VLLSNIYA  R WE   S           K PG SW++     H F A D SH   + I
Sbjct: 515 LVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAI 574

Query: 699 RGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRI 758
              L+ L  + + AGY+P   +V  D+ +  KE+ L  HSE++A+AFAL  MP   PI +
Sbjct: 575 YEKLDTLLDQIKAAGYVPRTDSVPLDMDDSMKEKLLHRHSERIAVAFALISMPIGKPIIV 634

Query: 759 IKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            KNLR+CVDCH+AIK ISK+  R+II+RD  RFHHF DG CSCGD+W
Sbjct: 635 KKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 121/378 (32%), Positives = 216/378 (57%), Gaps = 5/378 (1%)

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
            A V++       +R  K  H   +   Y    ++   L+++Y+K GE+ +A ++F+ MP
Sbjct: 8   LAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMP 67

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
           +++++ W+ MI+  +Q     +A+  FC MR     P QF F S ++ACA++  +++G Q
Sbjct: 68  QRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQ 127

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
           +H L ++ G+ S++FV + L D+Y+KCG M ++ ++F E P ++ V+W  MI GY ++GE
Sbjct: 128 MHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGE 187

Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA 484
             +A++ F KM++E+V   +    S L AC +L A + G  VH   VK  ++ D+ V NA
Sbjct: 188 FEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNA 247

Query: 485 LIDMYAKCGSITDARLVFDMMND-WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRP 543
           L DMY+K G +  A  VF + ++  N VS+  +I GY       + L VF  ++++G  P
Sbjct: 248 LTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEP 307

Query: 544 NNLTFVGVLSACSNGGLLEQG-EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           N  TF  ++ AC+N   LEQG + + + M  N+  +P +   + +V + G+ G L++A +
Sbjct: 308 NEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGKCGLLEQAIQ 365

Query: 603 LIEGIPFQPSVMIWRALL 620
             + I   P+ + W +L+
Sbjct: 366 AFDEIG-DPTEIAWNSLV 382



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 137/498 (27%), Positives = 244/498 (48%), Gaps = 37/498 (7%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           ++++ A  +Q+  +   L+    +H  ++  G     F TN L+N+Y K   L  A KLF
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D MP+RN +S+   I G + +S+F EA+  F  +   G     FAF++ ++   S+G  E
Sbjct: 64  DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDC------------ 222
           +   +     K G  S  FVG+ L D +S CG +  A KVF+ +   C            
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEM--PCKDEVSWTAMIDG 181

Query: 223 ------FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
                 FEEAL  F +M       +       L AC  L   +  +S H   +K  +E D
Sbjct: 182 YSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESD 241

Query: 277 LYVAVALLDLYTKSGEISNARRIFE-EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
           ++V  AL D+Y+K+G++ +A  +F  +   ++V+ ++ +I  Y +T+     + +F  +R
Sbjct: 242 IFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELR 301

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
           +  + PN+FTF S+++ACA    L+ G Q+H+ V+++    D FVS+ L+D+Y KCG +E
Sbjct: 302 RQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLE 361

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
            +++ F E      + WN+++  + Q G    A+ +F +M++  V    +T+ S+L  C+
Sbjct: 362 QAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCS 421

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVA--------NALIDMYAKCGSITDARLVFDMMN- 506
               +E G+          Y MD            + +ID+  + G + +A+   + M  
Sbjct: 422 HAGLVEEGLDYF-------YSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPF 474

Query: 507 DWNEVSWNAMISGYSMHG 524
           + N   W + +    +HG
Sbjct: 475 EPNAFGWCSFLGACRIHG 492



 Score = 46.2 bits (108), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 27/122 (22%), Positives = 57/122 (46%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N  ++++ +++C     L+    +H QV+K     D F +++L+++Y K   L  A +
Sbjct: 306 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQ 365

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
            FDE+ +   I++ + +  +       +A+ +F  +   G + N   F + L      G 
Sbjct: 366 AFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGL 425

Query: 173 AE 174
            E
Sbjct: 426 VE 427


>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 908

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 276/778 (35%), Positives = 421/778 (54%), Gaps = 28/778 (3%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E   +SY + LQ C +   L+    +H  ++  G  +D      L+ +YV    L    K
Sbjct: 91  ELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRK 150

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +FD++       +   +  Y     F E+V LF  + + G   N + FT  LK   ++G 
Sbjct: 151 IFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGK 210

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-----------FND 221
            + C  V   V KLG  SN  V  +LI A+   G VE A  +FD L            N 
Sbjct: 211 VKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMING 270

Query: 222 CF-----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
           C         L  F QM  +G + +  T   VL AC  +  + + ++ HG  +K C+  +
Sbjct: 271 CVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEE 330

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           +  +  LLD+Y+K G ++ A  +F +M    ++ W+ +IA Y +  L  DA+ LF  M+ 
Sbjct: 331 VVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQS 390

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             V P+ +T  S++ ACA    LD G  +HS V++ G+ S++ V+NAL+++YAKCG +E 
Sbjct: 391 KGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEE 450

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           +  +F++ P ++ V+WNTMI GY Q     +A+ +F  M ++Q    ++T + VL ACA 
Sbjct: 451 ARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDM-QKQFKPDDITMACVLPACAG 509

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           LAAL+ G ++H   ++  Y  D+ VA AL+DMYAKCG +  A+L+FDM+   + +SW  M
Sbjct: 510 LAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVM 569

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           I+GY MHG   E +  F+ M+  G  P+  +F  +L+ACS+ GLL +G  +F SM    G
Sbjct: 570 IAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECG 629

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
           +EP +EHY  +V LL R G+L KA K IE +P +P   IW  LL  C IH++V++    A
Sbjct: 630 VEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVA 689

Query: 637 QHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYF 685
           +HI + EP++   +V+L+N+YA A  WE           +   + PG SWIE  G  + F
Sbjct: 690 EHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIF 749

Query: 686 RAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAF 745
            AG++ H     I  +L  L M+ +   Y      VL +  + EKE     HSEK A+AF
Sbjct: 750 VAGNSKHPQAKKIDVLLSKLTMQMQNEDYSSMFRYVLINEDDMEKEMIQCGHSEKSAMAF 809

Query: 746 ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGD 803
            +  +PP   +R+ KN R+C DCH   K +SK  + EI++RD +RFHHF+DG CSC D
Sbjct: 810 GILNLPPGRTVRVSKNRRVCGDCHEMGKFMSKTTKMEIVLRDSNRFHHFKDGLCSCRD 867


>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
          Length = 913

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 303/805 (37%), Positives = 447/805 (55%), Gaps = 79/805 (9%)

Query: 73  QTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGY 132
           + A  +H Q +K G   +LF +N L+N+YV++  L  A KLFDEM  RN +++   I GY
Sbjct: 116 EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 175

Query: 133 TVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA--ELCPCVFACVYKLGHDS 190
           T + +  EA   F  + R G   N +AF + L+     G +  +L   +   + K  + S
Sbjct: 176 TQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGS 235

Query: 191 NAFVGTALIDAFSVC-GCVEFARKVFDGL-------FNDCFE---------EALNFFSQM 233
           +  V   LI  +  C      AR VFDG+       +N              A + FS M
Sbjct: 236 DVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSM 295

Query: 234 RAVG----FKPNN-FTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA--LLDL 286
           +  G    FKPN+ F+   VL+     +  R  +  H   ++T    D  VA+   L+++
Sbjct: 296 QKEGLGFSFKPNDAFSEFSVLE-----EGRRKGREVHAHVIRTGLN-DNKVAIGNGLVNM 349

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM------------ 334
           Y KSG I++A  +FE M +KD + W+ +I+   Q + S DA E+F  M            
Sbjct: 350 YAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVI 409

Query: 335 -----RQAFVAP---------------NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL 374
                 +A V+                ++ TF+++L A +++   ++ +QIH+LV++  L
Sbjct: 410 GALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCL 469

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAE-SPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
             D  + NAL+  Y KCG M    ++FA  S  R+ V+WN+MI GY+    + KAM +  
Sbjct: 470 SDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVW 529

Query: 434 KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCG 493
            M+++       T++++L ACAS+A LE GM+VH   ++A  + DVVV +AL+DMY+KCG
Sbjct: 530 FMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCG 589

Query: 494 SITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLS 553
            I  A   F++M   N  SWN+MISGY+ HG   + LK+F  M   G  P+++TFVGVLS
Sbjct: 590 RIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLS 649

Query: 554 ACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSV 613
           ACS+ G +E+G  +FKSM   Y + P +EH++ MV LLGRAG LD+    I  +P +P+V
Sbjct: 650 ACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNV 709

Query: 614 MIWRALLGACIIHN--NVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEK------ 665
           +IWR +LGAC   N  N E+GR +A+ +L+ EP++   +VLL+N+YA    WE       
Sbjct: 710 LIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKART 769

Query: 666 -----AASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSA 720
                A  KE G SW+  +  VH F AGD  H + ++I   L  LN K R AGYIP    
Sbjct: 770 AMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLRELNRKMRDAGYIPQTKY 829

Query: 721 VLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQ 780
            L D+  + KE  L  HSEK+A+AF L +   + PIRI+KNLR+C DCH+A   ISKIV 
Sbjct: 830 ALFDLELENKEELLSYHSEKIAVAFVLTRQ-SALPIRIMKNLRVCGDCHSAFGYISKIVG 888

Query: 781 REIIIRDVHRFHHFQDGCCSCGDFW 805
           R+I++RD +RFHHF+DG CSCGD+W
Sbjct: 889 RQIVLRDSNRFHHFEDGKCSCGDYW 913



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 62/118 (52%)

Query: 442 ATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLV 501
           ++  T+ S++         E   ++H  ++K  +  ++ ++N LI++Y + G +  A+ +
Sbjct: 97  SSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKL 156

Query: 502 FDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGG 559
           FD M++ N V+W  +ISGY+ +G   E    F  M + G+ PN+  F   L AC   G
Sbjct: 157 FDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 214



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 4/124 (3%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCL--DLFATNVLLNVYVKLNRLPDA 110
             +S ++AT L +C     L+  M +H   ++   CL  D+   + L+++Y K  R+  A
Sbjct: 537 RLDSFTFATILSACASVATLERGMEVHACGIRA--CLESDVVVGSALVDMYSKCGRIDYA 594

Query: 111 TKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSM 170
           ++ F+ MP RN  S+ + I GY       +A+ LF+ +  +G   +   F   L     +
Sbjct: 595 SRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHV 654

Query: 171 GWAE 174
           G+ E
Sbjct: 655 GFVE 658


>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 783

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 278/754 (36%), Positives = 418/754 (55%), Gaps = 29/754 (3%)

Query: 79  HCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQF 138
           H Q +  G   DL     L       +    A  LF  +P+ +   F   ++G++++   
Sbjct: 32  HAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFFSVPKPDIFLFNVLVRGFSLNDSP 91

Query: 139 VEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTAL 198
             ++ L++ L R  + L+P  FT    V        L   + A     G+ SN FVG+AL
Sbjct: 92  SSSISLYTHLRRNTN-LSPDNFTYAFAVAACSNDKHLM-LLHAHSIIDGYGSNVFVGSAL 149

Query: 199 IDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNN 242
           +D +     V +ARKVFDG+                 N CF++++  F +M A G + ++
Sbjct: 150 VDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDS 209

Query: 243 FTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEE 302
            T   VL A   L  ++V       ALK  +    YV   L+ LY+K G+++ AR +F  
Sbjct: 210 STVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRR 269

Query: 303 MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG 362
           + + D+I ++ MI+ +     +  +V+LF  +  +    +  T V ++   +    L L 
Sbjct: 270 INRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLA 329

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
             IH   V+ G++ +  VS A   +Y K   ++ +  LF ESP++  V WN MI GY Q 
Sbjct: 330 CSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQN 389

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
           G    A+ +F +M++ +     VT +++L ACA L +L  G  VH L    N + ++ V+
Sbjct: 390 GSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVS 449

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
            AL+DMYAKCG+I++A  +FD M++ N V+WN MI GY +HG   E LK+++ M   G+ 
Sbjct: 450 TALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYN 509

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           P+ +TF+ VL ACS+ GL+ +GE  F +MV  Y IEP IEHY  MV +LGR+G L+KA +
Sbjct: 510 PSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALE 569

Query: 603 LIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARS 662
            I+ +P +P   +W  LLGAC+IH + +I RL+++ + + +P     +VLLSNIY++ R+
Sbjct: 570 FIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVLLSNIYSVERN 629

Query: 663 WEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRK 711
           + KAAS           K PG + IE  G  H F +GD SH+    I   LE L  K R+
Sbjct: 630 FPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHATDIYAKLEKLTGKMRE 689

Query: 712 AGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTA 771
            GY  +    L DV E+EKE  + VHSEKLA+AF L    P + IRIIKNLR+C+DCHTA
Sbjct: 690 MGYQAETVPALHDVEEEEKELAVNVHSEKLAIAFGLITTEPGNEIRIIKNLRVCLDCHTA 749

Query: 772 IKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            K ISKI +R I++RD +RFHHF+DG CSCGD+W
Sbjct: 750 TKFISKITERVIVVRDANRFHHFKDGICSCGDYW 783



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 139/526 (26%), Positives = 246/526 (46%), Gaps = 35/526 (6%)

Query: 22  NAWLRGLS------AQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTA 75
           N  +RG S      +  +L T    N+  +P  F+        YA ++ +C  +  L   
Sbjct: 79  NVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFT--------YAFAVAACSNDKHL--- 127

Query: 76  MTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVS 135
           M +H   +  G   ++F  + L+++Y K +R+  A K+FD MPER+T+ + T I G   +
Sbjct: 128 MLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKN 187

Query: 136 SQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVG 195
             F +++ LF  +  +G  ++    TA L     +   ++   +     K+G     +V 
Sbjct: 188 CCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVL 247

Query: 196 TALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFK 239
           T LI  +S CG V  AR +F  +                 N   E ++  F ++   G +
Sbjct: 248 TGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGER 307

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
            ++ T   ++        + +A S HG  +K+   ++  V+ A   +Y K  EI  AR +
Sbjct: 308 VSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHL 367

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL 359
           F+E P+K V+ W+ MI+ Y Q   +  A+ LF  M +    PN  T  ++L ACA +  L
Sbjct: 368 FDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSL 427

Query: 360 DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGY 419
             G  +H L+    L  +++VS AL+D+YAKCG +  + +LF    ++N VTWNTMI GY
Sbjct: 428 SFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGY 487

Query: 420 VQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV-HCLTVKANYDMD 478
              G   +A+ ++++ML      + VT+ SVL AC+    +  G ++ H +  K   +  
Sbjct: 488 GLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPL 547

Query: 479 VVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
           +     ++D+  + G +  A   +  M  +     W  ++    +H
Sbjct: 548 IEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIH 593


>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
 gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
          Length = 865

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 285/807 (35%), Positives = 424/807 (52%), Gaps = 102/807 (12%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           ++   NV+LN YVKL RL DA +LF  MP R+  S+ T + GY  S Q++ ++  F ++H
Sbjct: 70  NVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMH 129

Query: 150 REGHEL-NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCV 208
           R G    N F F   +K   ++G   L   +   V K G   ++ V  AL+D F  CG V
Sbjct: 130 RSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTV 189

Query: 209 EFARKVFDG---------------------------LFNDCFE----------------- 224
           + A ++F                             LF+   E                 
Sbjct: 190 DLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSG 249

Query: 225 ---EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
              EAL+    M++ G + ++ T+   L AC  L ++R  K  H   ++    +D YVA 
Sbjct: 250 RVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVAS 309

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           AL++LY K G    A+ +F  +  ++ + W+ +IA + Q     ++VELF +MR   +  
Sbjct: 310 ALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTL 369

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC---------- 391
           +QF   +++  C +   L LG Q+HSL ++ G +  V VSN+L+ +YAKC          
Sbjct: 370 DQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIF 429

Query: 392 ---------------------GRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMI 430
                                G +  + E F     +N +TWN M+  Y+Q G     + 
Sbjct: 430 RFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLR 489

Query: 431 MFSKMLEEQ-VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMY 489
           M++ ML E+ V    VTY ++ + CA L A + G Q+   TVK    +D  VANA+I MY
Sbjct: 490 MYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMY 549

Query: 490 AKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFV 549
           +KCG I +AR VFD +N  + VSWNAMI+GYS HG+  + +++FD + +RG +P+ +++V
Sbjct: 550 SKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYV 609

Query: 550 GVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF 609
            VLS CS+ GL+++G++YF  M   + I P +EH++ MV LLGRAGHL +A  LI+ +P 
Sbjct: 610 AVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPM 669

Query: 610 QPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-- 667
           +P+  +W ALL AC IH N E+  L+A+H+ + +  D  +++L++ IYA A   + +A  
Sbjct: 670 KPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQI 729

Query: 668 ---------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDL 718
                     K PG SW+E    VH F+A D SH  +  IR  L+ L  K  + GY    
Sbjct: 730 RKLMRDKGIKKNPGYSWMEVNNKVHVFKADDVSHPQVIAIRKKLDELMEKIARLGY---- 785

Query: 719 SAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKI 778
                 VR D     +  HSEKLA+AF L  +P   PI I+KNLRIC DCHT IK+IS +
Sbjct: 786 ------VRTDSPRSEIH-HSEKLAVAFGLMSLPAWMPIHIMKNLRICGDCHTVIKLISSV 838

Query: 779 VQREIIIRDVHRFHHFQDGCCSCGDFW 805
             RE +IRD  RFHHF  G CSCGD+W
Sbjct: 839 TGREFVIRDAVRFHHFNGGSCSCGDYW 865



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 122/487 (25%), Positives = 213/487 (43%), Gaps = 105/487 (21%)

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR------ 298
           FA  L++C     +  A++ HG  +       +++   LL  Y   G + +ARR      
Sbjct: 7   FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTDI 66

Query: 299 --------------------------IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFC 332
                                     +F  MP +DV  W+ +++ Y Q+   + ++E F 
Sbjct: 67  AHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFV 126

Query: 333 RM-RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC 391
            M R    +PN FTF   +++C  +    L  Q+  +V + G   D  V+ AL+D++ +C
Sbjct: 127 SMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRC 186

Query: 392 GR-------------------------------MENSVELFAESPKRNHVTWNTMIVGYV 420
           G                                +++++ELF   P+R+ V+WN M+    
Sbjct: 187 GTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALS 246

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV 480
           Q G V +A+ M   M  + V     TY+S L ACA L++L  G Q+H   ++    +D  
Sbjct: 247 QSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPY 306

Query: 481 VANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG 540
           VA+AL+++YAKCG   +A+ VF+ ++D N V+W  +I+G+  HG   E +++F+ M+   
Sbjct: 307 VASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAEL 366

Query: 541 WRPNNLTFVGVLSAC---------------------------SNGGL--------LEQGE 565
              +      ++S C                           SN  +        L+  E
Sbjct: 367 MTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAE 426

Query: 566 AYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACII 625
           + F+ M      E  I  +TSM++   + G++ KA +  +G+  + +V+ W A+LGA I 
Sbjct: 427 SIFRFMN-----EKDIVSWTSMITAHSQVGNIAKAREFFDGMSTK-NVITWNAMLGAYIQ 480

Query: 626 HNNVEIG 632
           H   E G
Sbjct: 481 HGAEEDG 487



 Score = 44.3 bits (103), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 49/213 (23%), Positives = 86/213 (40%), Gaps = 37/213 (17%)

Query: 442 ATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDA-RL 500
           A    ++  LR+C +  AL     +H   V       V + N L+  Y  CG++ DA RL
Sbjct: 2   AVTQAFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRL 61

Query: 501 VFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR---GWR--------------- 542
           +   +   N ++ N M++GY   G  ++ +++F  M  R    W                
Sbjct: 62  LLTDIAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLAS 121

Query: 543 --------------PNNLTFVGVLSACSNGGLLEQGEAY-FKSMVANYGIEPCIEHYTSM 587
                         PN  TF   + +C  G L E+  A     MV  +G +   +   ++
Sbjct: 122 LESFVSMHRSGDSSPNAFTFAYAMKSC--GALGERSLALQLLGMVQKFGSQDDSDVAAAL 179

Query: 588 VSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
           V +  R G +D A++L   I  +P++    ++L
Sbjct: 180 VDMFVRCGTVDLASRLFVRIK-EPTIFCRNSML 211


>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 886

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 292/797 (36%), Positives = 432/797 (54%), Gaps = 48/797 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLD-LFATNVLLNVYVKLNRLPDATKL 113
           ++ ++   L++     D+     IH  V K G  +D +   N L+N+Y K        K+
Sbjct: 92  DNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKV 151

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           FD + ERN +S+ + I       ++  A+  F  +  E  E + F   +      +    
Sbjct: 152 FDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMP 211

Query: 174 E---LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------- 219
           E   +   V A   + G + N+F+   L+  +   G +  + KV  G F           
Sbjct: 212 EGLLMGKQVHAYGLRKG-ELNSFIINTLVAMYGKMGKLA-SSKVLLGSFEGRDLVTWNTV 269

Query: 220 ------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT-C 272
                 N+ F EAL +  +M   G +P+ FT + VL AC  L+ +R  K  H  ALK   
Sbjct: 270 LSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGS 329

Query: 273 YEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFC 332
            + + +V  AL+D+Y    ++ +  R+F+ M  + +  W+ MI  YAQ +   +A+ LF 
Sbjct: 330 LDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFI 389

Query: 333 RMRQ-AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC 391
            M + A +  N  T   V+ AC           IH  VV+ GL  D FV NALMD+Y++ 
Sbjct: 390 EMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRL 449

Query: 392 GRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATE------- 444
           G+++ +  +F +   R+ VTWNT+I GYV       A++M  KM   +  A+E       
Sbjct: 450 GKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSL 509

Query: 445 ----VTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARL 500
               +T  ++L +CA+L+AL  G ++H   +K N   DV V +AL+DMYAKCG +  +R 
Sbjct: 510 KPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRK 569

Query: 501 VFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGL 560
           VFD +   N ++WN ++  Y MHG S + + +  +M  +G +PN +TF+ V +ACS+ G+
Sbjct: 570 VFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGM 629

Query: 561 LEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQ-PSVMIWRAL 619
           + +G   F +M  +YG+EP  +HY  +V LLGRAG + +A +LI  IP        W +L
Sbjct: 630 VNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSL 689

Query: 620 LGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS----------- 668
           LGAC IHNN+EIG ++AQ+++  EP   + +VLL+NIY+ A  W KA             
Sbjct: 690 LGACRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWYKATEVRRNMKAQGVR 749

Query: 669 KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVRED 728
           KEPG SWIE+   VH F AGD+SH     +RG LE L  + RK GYIPD S VL +V ED
Sbjct: 750 KEPGCSWIEHGDEVHKFVAGDSSHPQSEKLRGYLETLWERMRKEGYIPDTSCVLHNVEED 809

Query: 729 EKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDV 788
           EKE  L  HSEKLA+AF +    P + IR+ KNLR+C DCH A K ISK+V REII+RDV
Sbjct: 810 EKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKVVDREIILRDV 869

Query: 789 HRFHHFQDGCCSCGDFW 805
            RFHHF++G CSCGD+W
Sbjct: 870 RRFHHFKNGTCSCGDYW 886



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 139/539 (25%), Positives = 255/539 (47%), Gaps = 36/539 (6%)

Query: 125 FVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVY 184
           ++  ++    S+   EAV  +  +   G + + FAF A LK +  +   +L   + A VY
Sbjct: 61  WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120

Query: 185 KLGHDSNAF-VGTALIDAFSVCGCVEFARKVFDGLFN----------------DCFEEAL 227
           K G+  ++  V   L++ +  CG      KVFD +                  + +E AL
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180

Query: 228 NFFSQMRAVGFKPNNFTFAFVLKACLGL---DTIRVAKSAHGCALKTCYEMDLYVAVALL 284
             F  M     +P++FT   V  AC      + + + K  H   L+   E++ ++   L+
Sbjct: 181 EAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG-ELNSFIINTLV 239

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
            +Y K G++++++ +      +D++ W+ +++   Q +  ++A+E    M    V P+ F
Sbjct: 240 AMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGF 299

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD-VFVSNALMDVYAKCGRMENSVELFAE 403
           T  SVL AC+ +E L  G ++H+  ++ G L +  FV +AL+D+Y  C ++ +   +F  
Sbjct: 300 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDG 359

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ-VPATEVTYSSVLRACASLAALEP 462
              R    WN MI GY Q     +A+++F +M E   + A   T + V+ AC    A   
Sbjct: 360 MFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSK 419

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
              +H   VK   D D  V NAL+DMY++ G I  A+ +F  M D + V+WN +I+GY  
Sbjct: 420 KEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVF 479

Query: 523 HGLSAEVLKVFDLMQ-------QRGWR----PNNLTFVGVLSACSNGGLLEQGEAYFKSM 571
                + L +   MQ       +R  R    PN++T + +L +C+    L +G+      
Sbjct: 480 SERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYA 539

Query: 572 VANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
           + N  +   +   +++V +  + G L  + K+ + IP + +V+ W  ++ A  +H N +
Sbjct: 540 IKN-NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIR-NVITWNVIVMAYGMHGNSQ 596



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 132/442 (29%), Positives = 215/442 (48%), Gaps = 11/442 (2%)

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD-LY 278
           ++   EA+  +  M  +G KP+NF F  +LKA   L  + + K  H    K  Y +D + 
Sbjct: 71  SNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVT 130

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           VA  L++LY K G+     ++F+ + +++ + W+ +I+     +    A+E F  M    
Sbjct: 131 VANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDED 190

Query: 339 VAPNQFTFVSVLQACATM---EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
           V P+ FT VSV  AC+     EGL +G Q+H+  +R G L+  F+ N L+ +Y K G++ 
Sbjct: 191 VEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNS-FIINTLVAMYGKMGKLA 249

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
           +S  L      R+ VTWNT++    Q  +  +A+    +M+ E V     T SSVL AC+
Sbjct: 250 SSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACS 309

Query: 456 SLAALEPGMQVHCLTVK-ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
            L  L  G ++H   +K  + D +  V +AL+DMY  C  +     VFD M D     WN
Sbjct: 310 HLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWN 369

Query: 515 AMISGYSMHGLSAEVLKVFDLMQQR-GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA 573
           AMI+GY+ +    E L +F  M++  G   N+ T  GV+ AC   G   + EA     V 
Sbjct: 370 AMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEA-IHGFVV 428

Query: 574 NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE--I 631
             G++       +++ +  R G +D  AK I G      ++ W  ++   +     E  +
Sbjct: 429 KRGLDRDRFVQNALMDMYSRLGKID-IAKRIFGKMEDRDLVTWNTIITGYVFSERHEDAL 487

Query: 632 GRLSAQHILDFEPEDEATHVLL 653
             L    IL+ +  + A+ V L
Sbjct: 488 LMLHKMQILERKASERASRVSL 509


>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
 gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
          Length = 687

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 264/684 (38%), Positives = 390/684 (57%), Gaps = 29/684 (4%)

Query: 151 EGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEF 210
           EG + N   F   L  +V          + +CV +  H  + FV TAL++ ++ CG +  
Sbjct: 4   EGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTD 63

Query: 211 ARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLG 254
           ARKVFDG+                 ++   EA   F +M+  G + +  TF  +L AC+ 
Sbjct: 64  ARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVN 123

Query: 255 LDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFM 314
            + ++  K       +T +E+DL+V  AL+ +Y +     NA ++F  M +K++I WS +
Sbjct: 124 PENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAI 183

Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL 374
           I  +A      +A+  F  M+Q  + PN+ TF+S+L    T  GL+  ++IH L+   GL
Sbjct: 184 ITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGL 243

Query: 375 LSDVFVSNALMDVYAKC--GRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMF 432
                +SNAL++VY +C  G ++ +  +  E  ++    WN +I GY   G   +A+  +
Sbjct: 244 DDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETY 303

Query: 433 SKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKC 492
            ++  E +P  +VT+ SVL AC S  +L  G  +H   V+   D DV+V NAL +MY+KC
Sbjct: 304 QRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKC 363

Query: 493 GSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL 552
           GS+ +AR +FD M   + VSWN M+  Y+ HG S EVLK+   M+Q G + N +TFV VL
Sbjct: 364 GSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVL 423

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
           S+CS+ GL+ +G  YF S+  + GIE   EHY  +V LLGRAG L +A K I  +P +P 
Sbjct: 424 SSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPE 483

Query: 613 VMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA----- 667
           ++ W +LLGAC +H +++ G+L+A+ +L+ +P + +  V+LSNIY+    W+ AA     
Sbjct: 484 IVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRA 543

Query: 668 ------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAV 721
                  K PG+S I+ +  VH FR  DTSH     I   +E L    R+AGY+PD   V
Sbjct: 544 MASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPDTKMV 603

Query: 722 LRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQR 781
           L DV E++KE  L  HSEKLA+AF L   P  S + I KNLR+C DCHTA K ISKI  R
Sbjct: 604 LHDVDEEQKESLLAYHSEKLAIAFGLISTPEKSSLHIFKNLRVCEDCHTATKFISKITGR 663

Query: 782 EIIIRDVHRFHHFQDGCCSCGDFW 805
           EI++RD HRFHHF+DG CSC D+W
Sbjct: 664 EIVVRDNHRFHHFRDGSCSCKDYW 687



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 231/486 (47%), Gaps = 20/486 (4%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           ++   L S +  D L+    IH  V +  + LD+F    L+N Y K   L DA K+FD M
Sbjct: 12  TFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGM 71

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
           P R+  ++ + I  Y++S +  EA  +F  +  EG   +   F + L   V+    +   
Sbjct: 72  PCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQHGK 131

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL--------------FNDCF 223
            V   + +   + + FVGTALI  ++ C   E A +VF  +              F D  
Sbjct: 132 HVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHG 191

Query: 224 E--EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
              EAL +F  M+  G  PN  TF  +L        +      H    +   +    ++ 
Sbjct: 192 HCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSN 251

Query: 282 ALLDLYTK--SGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
           AL+++Y +  +GE+  A  I +EM ++ +  W+ +I  Y     S +A+E + R++   +
Sbjct: 252 ALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEAI 311

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
             ++ TF+SVL AC +   L  G  IHS  V  GL SDV V NAL ++Y+KCG MEN+  
Sbjct: 312 PVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARR 371

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +F   P R+ V+WN M+  Y Q GE  + + +  KM +E V    +T+ SVL +C+    
Sbjct: 372 IFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGL 431

Query: 460 LEPGMQ-VHCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMI 517
           +  G Q  H L      ++       L+D+  + G + +A + +  M ++   V+W +++
Sbjct: 432 IAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLL 491

Query: 518 SGYSMH 523
               +H
Sbjct: 492 GACRVH 497



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 105/194 (54%), Gaps = 2/194 (1%)

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGS 494
           ML E V A  +T+ +VL +     AL  G  +H    ++ + +DV V  AL++ Y KCGS
Sbjct: 1   MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60

Query: 495 ITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSA 554
           +TDAR VFD M   +  +WN+MIS YS+   S E   +F  MQ  G R + +TF+ +L A
Sbjct: 61  LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120

Query: 555 CSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVM 614
           C N   L+ G+ + +  ++    E  +   T+++++  R    + AA++  G   Q +++
Sbjct: 121 CVNPENLQHGK-HVRESISETSFELDLFVGTALITMYARCRSPENAAQVF-GRMKQKNLI 178

Query: 615 IWRALLGACIIHNN 628
            W A++ A   H +
Sbjct: 179 TWSAIITAFADHGH 192


>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Vitis vinifera]
          Length = 686

 Score =  500 bits (1288), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 247/597 (41%), Positives = 369/597 (61%), Gaps = 11/597 (1%)

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           NDCF++A+ F+  MR+ GF PNNFTF FVLKAC  L  +++    H   +K  ++ D++V
Sbjct: 90  NDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFV 149

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
             +L+ LY K G + +A ++F+++P K+V+ W+ +I+ Y       +A+++F R+ +  +
Sbjct: 150 KTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNL 209

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
           AP+ FT V VL AC  +  L+ G  IH  ++ +G++ +VFV  +L+D+YAKCG ME +  
Sbjct: 210 APDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARS 269

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +F   P+++ V+W  MI GY   G   +A+ +F +M  E V     T   VL ACA L A
Sbjct: 270 VFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGA 329

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
           LE G  V  L  +  +  + V+  ALID+YAKCGS++ A  VF  M + + V WNA+ISG
Sbjct: 330 LELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISG 389

Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
            +M+G       +F  +++ G +P+  TF+G+L  C++ GL+++G  YF SM   + + P
Sbjct: 390 LAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTP 449

Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHI 639
            IEHY  MV LLGRAG LD+A +LI  +P + + ++W ALLGAC IH + ++  L+ + +
Sbjct: 450 SIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQL 509

Query: 640 LDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAG 688
           ++ EP +   +VLLSNIY+    W++AA            K PG SWIE  G+VH F  G
Sbjct: 510 IELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVG 569

Query: 689 DTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALF 748
           D  H     I   L+ L  K + AGY+P    VL D+ E+EKE +L  HSEKLA+AF L 
Sbjct: 570 DKYHPLSEKIYAKLDELTKKMKVAGYVPTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLI 629

Query: 749 KMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
              P++ IR++KNLR+C DCH AIK+IS I  REI +RD +RFH F++G CSC D+W
Sbjct: 630 SATPTAVIRVVKNLRVCGDCHMAIKLISSITGREITVRDNNRFHCFREGSCSCNDYW 686



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 123/354 (34%), Positives = 199/354 (56%), Gaps = 8/354 (2%)

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACAT 355
            R +F ++ + ++  W+ MI      D   DA+E +  MR     PN FTF  VL+ACA 
Sbjct: 65  TRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACAR 124

Query: 356 MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTM 415
           +  L LG +IH+LVV+ G   DVFV  +L+ +YAKCG +E++ ++F + P +N V+W  +
Sbjct: 125 LLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAI 184

Query: 416 IVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY 475
           I GY+ +G+  +A+ MF ++LE  +     T   VL AC  L  L  G  +H   ++   
Sbjct: 185 ISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGM 244

Query: 476 DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDL 535
             +V V  +L+DMYAKCG++  AR VFD M + + VSW AMI GY+++GL  E + +F  
Sbjct: 245 VRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQ 304

Query: 536 MQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV--ANYGIEPCIEHYTSMVSLLGR 593
           MQ+   +P+  T VGVLSAC+  G LE GE +   +V    +   P +   T+++ L  +
Sbjct: 305 MQRENVKPDCYTVVGVLSACARLGALELGE-WVSGLVDRNEFLYNPVLG--TALIDLYAK 361

Query: 594 AGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEI--GRLSAQHILDFEPE 645
            G + +A ++ +G+  +  V +W A++    ++  V+I  G       L  +P+
Sbjct: 362 CGSMSRAWEVFKGMKEKDRV-VWNAIISGLAMNGYVKISFGLFGQVEKLGIKPD 414



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/456 (26%), Positives = 220/456 (48%), Gaps = 18/456 (3%)

Query: 86  GNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLF 145
           G C D +  N++L      +       LF ++ + N   + T I+G   +  F +A+  +
Sbjct: 41  GLCHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFY 100

Query: 146 STLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVC 205
             +  EG   N F F   LK    +   +L   +   V K G D + FV T+L+  ++ C
Sbjct: 101 GLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKC 160

Query: 206 GCVEFARKVFDGLFNDC----------------FEEALNFFSQMRAVGFKPNNFTFAFVL 249
           G +E A KVFD + +                  F EA++ F ++  +   P++FT   VL
Sbjct: 161 GYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVL 220

Query: 250 KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
            AC  L  +   +  H C ++     +++V  +L+D+Y K G +  AR +F+ MP+KD++
Sbjct: 221 SACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIV 280

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
            W  MI  YA   L  +A++LF +M++  V P+ +T V VL ACA +  L+LG  +  LV
Sbjct: 281 SWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLV 340

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAM 429
            R   L +  +  AL+D+YAKCG M  + E+F    +++ V WN +I G    G V  + 
Sbjct: 341 DRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISF 400

Query: 430 IMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ-VHCLTVKANYDMDVVVANALIDM 488
            +F ++ +  +     T+  +L  C     ++ G +  + +    +    +     ++D+
Sbjct: 401 GLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDL 460

Query: 489 YAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
             + G + +A +L+ +M  + N + W A++    +H
Sbjct: 461 LGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIH 496



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 182/380 (47%), Gaps = 18/380 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N+ ++   L++C +  DLQ  + IH  V+K G   D+F    L+ +Y K   L DA K+F
Sbjct: 111 NNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVF 170

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D++P++N +S+   I GY    +F EA+ +F  L       + F     L     +G   
Sbjct: 171 DDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLN 230

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------- 218
               +  C+ ++G   N FVGT+L+D ++ CG +E AR VFDG+                
Sbjct: 231 SGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYA 290

Query: 219 FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            N   +EA++ F QM+    KP+ +T   VL AC  L  + + +   G   +  +  +  
Sbjct: 291 LNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPV 350

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           +  AL+DLY K G +S A  +F+ M +KD + W+ +I+  A       +  LF ++ +  
Sbjct: 351 LGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLG 410

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR-VGLLSDVFVSNALMDVYAKCGRMENS 397
           + P+  TF+ +L  C     +D G +  + + R   L   +     ++D+  + G ++ +
Sbjct: 411 IKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEA 470

Query: 398 VELFAESP-KRNHVTWNTMI 416
            +L    P + N + W  ++
Sbjct: 471 HQLIRNMPMEANAIVWGALL 490


>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Vitis vinifera]
          Length = 735

 Score =  500 bits (1288), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 255/601 (42%), Positives = 366/601 (60%), Gaps = 20/601 (3%)

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           EAL  FS MR +  KPN  TF   +K+C  L  +   + AH  AL   +E DL+V+ AL+
Sbjct: 135 EALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALV 194

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM--------RQ 336
           D+Y+K GE+ +AR +F+E+  ++++ W+ MI  Y Q D +  A+ LF             
Sbjct: 195 DMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGD 254

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             V  +    VSVL AC+ +    +   +H  +++ G   D+ V N LMD YAKCG +  
Sbjct: 255 GEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGV 314

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE-QVPATEVTYSSVLRACA 455
           S  +F    +R+ ++WN++I  Y Q G   ++M +F +M+++ ++    VT S+VL ACA
Sbjct: 315 SRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACA 374

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
              +   G  +H   +K   + +V V  ++IDMY KCG +  AR  FD M + N  SW+A
Sbjct: 375 HSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSA 434

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           M++GY MHG + E L+VF  M   G +PN +TFV VL+ACS+ GLLE+G  +FK+M   +
Sbjct: 435 MVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEF 494

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS 635
            +EP +EHY  MV LLGRAG+L +A  LI+G+  +P  ++W ALLGAC +H NV++G +S
Sbjct: 495 DVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEIS 554

Query: 636 AQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHY 684
           A+ + + +P++   +VLLSNIYA A  WE               K PG S ++ +G VH 
Sbjct: 555 ARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHV 614

Query: 685 FRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALA 744
           F  GD  H     I   LE L+MK ++ GY+PD+++VL DV  +EKE  L VHSEKLA+A
Sbjct: 615 FLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVA 674

Query: 745 FALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
           F +    P + I IIKNLR+C DCHTAIK ISKIV REI++RD  RFHHF+DG CSCGD+
Sbjct: 675 FGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGDY 734

Query: 805 W 805
           W
Sbjct: 735 W 735



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 183/335 (54%), Gaps = 11/335 (3%)

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
           K +V  W+ +IA  A++  S++A+  F  MR+  + PN+ TF   +++C+ +  L  G Q
Sbjct: 114 KTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQ 173

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
            H   +  G   D+FVS+AL+D+Y+KCG + ++  LF E   RN V+W +MI GYVQ  +
Sbjct: 174 AHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDD 233

Query: 425 VGKAMIMFSKMLEE--------QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD 476
             +A+++F + L E        +V    +   SVL AC+ ++       VH   +K  ++
Sbjct: 234 AHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFE 293

Query: 477 MDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLM 536
            D+ V N L+D YAKCG +  +R VFD M + + +SWN++I+ Y+ +G+S E +++F  M
Sbjct: 294 GDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRM 353

Query: 537 QQRG-WRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAG 595
            + G    N +T   VL AC++ G    G+      V   G+E  +   TS++ +  + G
Sbjct: 354 VKDGEINYNAVTLSAVLLACAHSGSQRLGKC-IHDQVIKMGLESNVFVGTSIIDMYCKCG 412

Query: 596 HLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
            ++ A K  + +  + +V  W A++    +H + +
Sbjct: 413 KVEMARKAFDRMR-EKNVKSWSAMVAGYGMHGHAK 446



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 187/403 (46%), Gaps = 32/403 (7%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  ++  +++SC    DL +    H Q L  G   DLF ++ L+++Y K   L DA  LF
Sbjct: 151 NRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLF 210

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFST--LHREGHE------LNPFAFTAFLKV 166
           DE+  RN +S+ + I GY  +     A+ LF    +   G E      ++P A  + L  
Sbjct: 211 DEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSA 270

Query: 167 LVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------- 219
              +    +   V   + K G + +  V   L+DA++ CG +  +R+VFDG+        
Sbjct: 271 CSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISW 330

Query: 220 ---------NDCFEEALNFFSQMRAVG-FKPNNFTFAFVLKACLGLDTIRVAKSAHGCAL 269
                    N    E++  F +M   G    N  T + VL AC    + R+ K  H   +
Sbjct: 331 NSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVI 390

Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVE 329
           K   E +++V  +++D+Y K G++  AR+ F+ M +K+V  WS M+A Y     + +A+E
Sbjct: 391 KMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALE 450

Query: 330 LFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVY 388
           +F  M  A V PN  TFVSVL AC+    L+ G +   ++     +   V     ++D+ 
Sbjct: 451 VFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLL 510

Query: 389 AKCGRMENSVELFAESPKR-NHVTWNTMIVG-----YVQLGEV 425
            + G ++ + +L      R + V W  ++        V LGE+
Sbjct: 511 GRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEI 553



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 5/124 (4%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
           +N+ + +  L +C  +   +    IH QV+K G   ++F    ++++Y K  ++  A K 
Sbjct: 361 YNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKA 420

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV-----LV 168
           FD M E+N  S+   + GY +     EA+ +F  ++  G + N   F + L       L+
Sbjct: 421 FDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLL 480

Query: 169 SMGW 172
             GW
Sbjct: 481 EEGW 484


>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1183

 Score =  500 bits (1287), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 276/778 (35%), Positives = 420/778 (53%), Gaps = 28/778 (3%)

Query: 53   EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
            E   +SY + LQ C +   L+    +H  ++  G  +D      L+ +YV    L    K
Sbjct: 366  ELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRK 425

Query: 113  LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
            +FD++       +   +  Y     F E+V LF  + + G   N + FT  LK   ++G 
Sbjct: 426  IFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGK 485

Query: 173  AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-----------FND 221
             + C  V   V KLG  SN  V  +LI A+   G VE A  +FD L            N 
Sbjct: 486  VKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMING 545

Query: 222  CF-----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
            C         L  F QM  +G + +  T   VL A   +  + + ++ HG  +K C+  +
Sbjct: 546  CVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEE 605

Query: 277  LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
            +  +  LLD+Y+K G ++ A  +F +M    ++ W+  IA Y +  L  DA+ LF  M+ 
Sbjct: 606  VVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQS 665

Query: 337  AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
              V P+ +T  S++ ACA    LD G  +HS V++ G+ S++ V+NAL+++YAKCG +E 
Sbjct: 666  KGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEE 725

Query: 397  SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
            +  +F++ P ++ V+WNTMI GY Q     +A+ +F  M ++Q    ++T + VL ACA 
Sbjct: 726  ARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDM-QKQFKPDDITMACVLPACAG 784

Query: 457  LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
            LAAL+ G ++H   ++  Y  D+ VA AL+DMYAKCG +  A+L+FDM+   + +SW  M
Sbjct: 785  LAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVM 844

Query: 517  ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
            I+GY MHG   E +  F+ M+  G  P+  +F  +L+ACS+ GLL +G  +F SM    G
Sbjct: 845  IAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECG 904

Query: 577  IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
            +EP +EHY  +V LL R G+L KA K IE +P +P   IW  LL  C IH++V++    A
Sbjct: 905  VEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVA 964

Query: 637  QHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYF 685
            +HI + EP++   +V+L+N+YA A  WE           +   + PG SWIE  G  + F
Sbjct: 965  EHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIF 1024

Query: 686  RAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAF 745
             AG++ H     I  +L  L M+ +   Y      VL +  + EKE     HSEK A+AF
Sbjct: 1025 VAGNSKHPQAKRIDVLLRKLTMQMQNEDYFSMFRYVLINEDDMEKEMIQCGHSEKSAMAF 1084

Query: 746  ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGD 803
             +  +PP   +R+ KN R+C DCH   K +SK  +REI++RD +RFHHF+DG CSC D
Sbjct: 1085 GILNLPPGRTVRVSKNQRVCGDCHEMGKFMSKTTKREIVLRDSNRFHHFKDGLCSCRD 1142


>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
          Length = 771

 Score =  499 bits (1286), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 259/677 (38%), Positives = 387/677 (57%), Gaps = 29/677 (4%)

Query: 158 FAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG 217
           F   + LK    + W +L   +   V K G D + FVG AL+  +  C CVE+AR VFD 
Sbjct: 95  FMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDK 154

Query: 218 LF----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVA 261
           +                 N  F+ AL    +M  +  +P+      ++        +R+ 
Sbjct: 155 MMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMG 214

Query: 262 KSAHGCALKTC--YEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYA 319
           K+ H   ++      M +    ALLD+Y K G +  AR++F  + +K V+ W+ MIA   
Sbjct: 215 KAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCI 274

Query: 320 QTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVF 379
           +++   +  +LF RM++  + PN+ T +S++  C     L LG Q+H+ ++R G    + 
Sbjct: 275 RSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLA 334

Query: 380 VSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ 439
           ++ AL+D+Y KC  + N+  LF  +  R+ + W  M+  Y Q   + +A  +F +M    
Sbjct: 335 LATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSG 394

Query: 440 VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR 499
           V  T+VT  S+L  CA   AL+ G  VH    K   ++D ++  AL+DMYAKCG I  A 
Sbjct: 395 VRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAG 454

Query: 500 LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGG 559
            +F      +   WNA+I+G++MHG   E L +F  M+++G +PN++TF+G+L ACS+ G
Sbjct: 455 RLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAG 514

Query: 560 LLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRAL 619
           L+ +G+  F+ MV  +G+ P IEHY  MV LLGRAG LD+A ++I+ +P +P+ ++W AL
Sbjct: 515 LVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGAL 574

Query: 620 LGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS----------- 668
           + AC +H N ++G L+A  +L+ EPE+   +VL+SNIYA A  W  AA            
Sbjct: 575 VAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMK 634

Query: 669 KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVRED 728
           KEPG S IE  G VH F  GD SH  +  I  ML  +  K  +AGY+PD S VL ++ E+
Sbjct: 635 KEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEE 694

Query: 729 EKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDV 788
           EKE  L  HSEKLA+AF L    PS+PIRI+KNLR+C DCH A K++SKI  R II+RD 
Sbjct: 695 EKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDR 754

Query: 789 HRFHHFQDGCCSCGDFW 805
           +RFHHF++G CSCGD+W
Sbjct: 755 NRFHHFREGYCSCGDYW 771



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 130/487 (26%), Positives = 234/487 (48%), Gaps = 32/487 (6%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L++C Q    Q    IH  VLKKG   D+F  N L+ +Y +   +  A  +FD+M ER+ 
Sbjct: 101 LKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDV 160

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +S+ T I+  + + +F  A+ L   ++      +  A  + + +        +   + A 
Sbjct: 161 VSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHA- 219

Query: 183 VYKLGHDSNAFVG----TALIDAFSVCGCVEFARKVFDGLFNDC---------------- 222
            Y + + +N  +G    TAL+D ++ CG +  AR++F+GL                    
Sbjct: 220 -YVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNR 278

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
            EE    F +M+     PN  T   ++  C     +++ K  H   L+  + + L +A A
Sbjct: 279 LEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATA 338

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+D+Y K  +I NAR +F+    +DV+ W+ M++ YAQ +    A  LF +MR + V P 
Sbjct: 339 LVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPT 398

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           + T VS+L  CA    LDLG  +HS + +  +  D  ++ AL+D+YAKCG +  +  LF 
Sbjct: 399 KVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFI 458

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
           E+  R+   WN +I G+   G   +A+ +F++M  + V   ++T+  +L AC+    +  
Sbjct: 459 EAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTE 518

Query: 463 GMQ-----VHCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAM 516
           G +     VH   +    +        ++D+  + G + +A  ++  M    N + W A+
Sbjct: 519 GKKLFEKMVHTFGLVPQIEH----YGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGAL 574

Query: 517 ISGYSMH 523
           ++   +H
Sbjct: 575 VAACRLH 581



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 93/386 (24%), Positives = 172/386 (44%), Gaps = 25/386 (6%)

Query: 71  DLQTAMTIHCQVLKKGNC--LDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTT 128
           +++    +H  V++  N   + +  T  LL++Y K   L  A +LF+ + ++  +S+   
Sbjct: 210 NMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAM 269

Query: 129 IQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGH 188
           I G   S++  E   LF  +  E    N     + +      G  +L   + A + + G 
Sbjct: 270 IAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGF 329

Query: 189 DSNAFVGTALIDAFSVCGCVEFARKVFDGLFN----------------DCFEEALNFFSQ 232
             +  + TAL+D +  C  +  AR +FD   N                +C ++A N F Q
Sbjct: 330 SVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQ 389

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           MR  G +P   T   +L  C     + + K  H    K   E+D  +  AL+D+Y K G+
Sbjct: 390 MRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGD 449

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           I+ A R+F E   +D+  W+ +I  +A      +A+++F  M +  V PN  TF+ +L A
Sbjct: 450 INAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHA 509

Query: 353 CATMEGLDLGNQIHSLVVRV-GLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHV 410
           C+    +  G ++   +V   GL+  +     ++D+  + G ++ + E+    P K N +
Sbjct: 510 CSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTI 569

Query: 411 TWNTMIVG-----YVQLGEVGKAMIM 431
            W  ++         QLGE+    ++
Sbjct: 570 VWGALVAACRLHKNPQLGELAATQLL 595


>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
          Length = 681

 Score =  499 bits (1286), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 256/647 (39%), Positives = 381/647 (58%), Gaps = 28/647 (4%)

Query: 187 GHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFF 230
           G+    F+   L++ +S CG ++ A K+FD +                 N  F EA+  F
Sbjct: 35  GYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTF 94

Query: 231 SQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKS 290
             MR  G  P  F F+  ++AC  L +I + K  H  ALK     +L+V   L D+Y+K 
Sbjct: 95  CGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKC 154

Query: 291 GEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVL 350
           G + +A ++FEEMP KD + W+ MI  Y++     +A+  F +M    V  +Q    S L
Sbjct: 155 GAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTL 214

Query: 351 QACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA-ESPKRNH 409
            AC  ++    G  +HS VV++G  SD+FV NAL D+Y+K G ME++  +F  +S  RN 
Sbjct: 215 GACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNV 274

Query: 410 VTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCL 469
           V++  +I GYV+  ++ K + +F ++  + +   E T+SS+++ACA+ AALE G Q+H  
Sbjct: 275 VSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQ 334

Query: 470 TVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEV 529
            +K N+D D  V++ L+DMY KCG +  A   FD + D  E++WN+++S +  HGL  + 
Sbjct: 335 VMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDA 394

Query: 530 LKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVS 589
           +K F+ M  RG +PN +TF+ +L+ CS+ GL+E+G  YF SM   YG+ P  EHY+ ++ 
Sbjct: 395 IKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVID 454

Query: 590 LLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEAT 649
           LLGRAG L +A + I  +PF+P+   W + LGAC IH + E+G+L+A+ ++  EP++   
Sbjct: 455 LLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGA 514

Query: 650 HVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNII 698
            VLLSNIYA  R WE   S           K PG SW++     H F A D SH   + I
Sbjct: 515 LVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHXRKSAI 574

Query: 699 RGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRI 758
              L+ L  + + AGY+P   +V  D+ +  KE+ L  HSE++A+AFAL  MP   PI +
Sbjct: 575 YEKLDXLLDQIKAAGYVPXTDSVPLDMDDXMKEKLLHRHSERIAVAFALISMPIGKPIIV 634

Query: 759 IKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            KNLR+CVDCH+AIK ISK+  R+II+RD  RFHHF DG CSCGD+W
Sbjct: 635 KKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 121/378 (32%), Positives = 215/378 (56%), Gaps = 5/378 (1%)

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
            A V++       +R  K  H   +   Y    ++   L+++Y+K GE+ +A ++F+ MP
Sbjct: 8   LAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMP 67

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
           +++++ W+ MI+  +Q     +A+  FC MR     P QF F S ++ACA++  +++G Q
Sbjct: 68  QRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQ 127

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
           +H L ++ G+ S++FV + L D+Y+KCG M ++ ++F E P ++ V+W  MI GY ++GE
Sbjct: 128 MHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGE 187

Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA 484
             +A++ F KM++E+V   +    S L AC +L A + G  VH   VK  ++ D+ V NA
Sbjct: 188 FEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNA 247

Query: 485 LIDMYAKCGSITDARLVFDMMND-WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRP 543
           L DMY+K G +  A  VF + ++  N VS+  +I GY       + L VF  ++++G  P
Sbjct: 248 LTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEP 307

Query: 544 NNLTFVGVLSACSNGGLLEQG-EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           N  TF  ++ AC+N   LEQG + + + M  N+  +P +   + +V + G+ G L+ A +
Sbjct: 308 NEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGKCGLLEHAIQ 365

Query: 603 LIEGIPFQPSVMIWRALL 620
             + I   P+ + W +L+
Sbjct: 366 AFDEIG-DPTEIAWNSLV 382



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 137/498 (27%), Positives = 244/498 (48%), Gaps = 37/498 (7%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           ++++ A  +Q+  +   L+    +H  ++  G     F TN L+N+Y K   L  A KLF
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D MP+RN +S+   I G + +S+F EA+  F  +   G     FAF++ ++   S+G  E
Sbjct: 64  DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDC------------ 222
           +   +     K G  S  FVG+ L D +S CG +  A KVF+ +   C            
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEM--PCKDEVSWTAMIDG 181

Query: 223 ------FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
                 FEEAL  F +M       +       L AC  L   +  +S H   +K  +E D
Sbjct: 182 YSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESD 241

Query: 277 LYVAVALLDLYTKSGEISNARRIFE-EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
           ++V  AL D+Y+K+G++ +A  +F  +   ++V+ ++ +I  Y +T+     + +F  +R
Sbjct: 242 IFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELR 301

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
           +  + PN+FTF S+++ACA    L+ G Q+H+ V+++    D FVS+ L+D+Y KCG +E
Sbjct: 302 RQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLE 361

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
           ++++ F E      + WN+++  + Q G    A+  F +M++  V    +T+ S+L  C+
Sbjct: 362 HAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCS 421

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVA--------NALIDMYAKCGSITDARLVFDMMN- 506
               +E G+          Y MD            + +ID+  + G + +A+   + M  
Sbjct: 422 HAGLVEEGLDYF-------YSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPF 474

Query: 507 DWNEVSWNAMISGYSMHG 524
           + N   W + +    +HG
Sbjct: 475 EPNAFGWCSFLGACRIHG 492



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 27/122 (22%), Positives = 56/122 (45%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N  ++++ +++C     L+    +H QV+K     D F +++L+++Y K   L  A +
Sbjct: 306 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQ 365

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
            FDE+ +   I++ + +  +       +A+  F  +   G + N   F + L      G 
Sbjct: 366 AFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGL 425

Query: 173 AE 174
            E
Sbjct: 426 VE 427


>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 703

 Score =  499 bits (1286), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 271/698 (38%), Positives = 382/698 (54%), Gaps = 27/698 (3%)

Query: 135 SSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFV 194
           ++   EA+ +     + G   + F +   LK  +          V  C+ K   + NA V
Sbjct: 6   ANTLSEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHV 65

Query: 195 GTALIDAFSVCGCVEFARKVFDGLFNDC----------------FEEALNFFSQMRAVGF 238
              L+  +  CG ++ AR VFD L                     E+A+  F +M   G 
Sbjct: 66  MNNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGV 125

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
           +PN  T+  +LKAC  L  ++  K  H C      E D+ V  ALL +Y K G I+ ARR
Sbjct: 126 QPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARR 185

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           IF+ +   D+I W+ MI  YAQ+    +A  L  +M Q    PN  T+VS+L ACA+   
Sbjct: 186 IFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGA 245

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           L    ++H   +  GL  DV V  AL+ +YAK G ++++  +F     R+ V+WN MI  
Sbjct: 246 LKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGA 305

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           + + G   +A  +F +M  E      + + S+L ACAS  ALE   ++H   + +  ++D
Sbjct: 306 FAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVD 365

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
           V V  AL+ MY+K GSI DAR+VFD M   N VSWNAMISG + HGL  + L+VF  M  
Sbjct: 366 VRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTA 425

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLD 598
            G +P+ +TFV VLSACS+ GL+++G + + +M   YGIEP + H   MV LLGRAG L 
Sbjct: 426 HGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLM 485

Query: 599 KAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYA 658
           +A   I+ +   P    W ALLG+C  + NVE+G L A+  L  +P++ AT+VLLSNIYA
Sbjct: 486 EAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYA 545

Query: 659 MARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNM 707
            A  W           E+   KEPG SWIE    +H F   D+SH +   I    + +  
Sbjct: 546 EAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKVIE 605

Query: 708 KSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVD 767
           K +  GYIPD   VL++    +KE  +  HSEKLA+ + L   PP +PIR+ KNLR+C D
Sbjct: 606 KIKAEGYIPDTRLVLKNKNMKDKELDICSHSEKLAIVYGLMHTPPGNPIRVFKNLRVCTD 665

Query: 768 CHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           CH A K+ISK+  REII+RD +RFHHF+DG CSCGD+W
Sbjct: 666 CHGATKLISKVEGREIIVRDANRFHHFKDGVCSCGDYW 703



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 149/488 (30%), Positives = 241/488 (49%), Gaps = 18/488 (3%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +S  Y   L+ C++  DL  A  +H  ++K     +    N LL+VY++  RL +A  +F
Sbjct: 27  DSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVF 86

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D + +++  S+   I GY       +A+ LF  +  EG + N   +   LK   S+   +
Sbjct: 87  DALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALK 146

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF----------- 223
               V AC+   G +S+  VGTAL+  +  CG +  AR++FD L N              
Sbjct: 147 WGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYA 206

Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                +EA     QM   GFKPN  T+  +L AC     ++  K  H  AL    E+D+ 
Sbjct: 207 QSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVR 266

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V  AL+ +Y KSG I +AR +F+ M  +DV+ W+ MI  +A+     +A +LF +M+   
Sbjct: 267 VGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEG 326

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
             P+   F+S+L ACA+   L+   +IH   +  GL  DV V  AL+ +Y+K G ++++ 
Sbjct: 327 CKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDAR 386

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            +F     RN V+WN MI G  Q G    A+ +F +M    V    VT+ +VL AC+   
Sbjct: 387 VVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAG 446

Query: 459 ALEPGM-QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN-DWNEVSWNAM 516
            ++ G  Q   +T     + DV   N ++D+  + G + +A+L  D M  D +E +W A+
Sbjct: 447 LVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGAL 506

Query: 517 ISGYSMHG 524
           +     +G
Sbjct: 507 LGSCRTYG 514


>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
          Length = 1151

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 261/766 (34%), Positives = 415/766 (54%), Gaps = 37/766 (4%)

Query: 27  GLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKG 86
           GL  +A    +Q   +   P  + +S        + L SC + +       IH Q  K G
Sbjct: 122 GLGEEALGLYRQMHRAGVVPTPYVLS--------SVLSSCTKAELFAQGRLIHAQGYKHG 173

Query: 87  NCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFS 146
            C ++F  N ++ +Y++      A ++F +MP R+T++F T I G+        A+ +F 
Sbjct: 174 FCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFE 233

Query: 147 TLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCG 206
            +   G   +    ++ L    S+G  +    + + ++K G  S+  +  +L+D +  CG
Sbjct: 234 EMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCG 293

Query: 207 CVEFARKVFD-----------------GLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVL 249
            VE A  +F+                 G  ND   ++   F QM+A G +PN FT+  +L
Sbjct: 294 DVETALVIFNSSDRTNVVLWNLMLVAFGQIND-LAKSFELFCQMQAAGIRPNQFTYPCIL 352

Query: 250 KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
           + C     I + +  H  ++KT +E D+YV+  L+D+Y+K G +  ARR+ E + +KDV+
Sbjct: 353 RTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVV 412

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
            W+ MIA Y Q +   DA+  F  M++  + P+     S +  CA +  +  G QIH+ +
Sbjct: 413 SWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARI 472

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAM 429
              G   DV + NAL+++YA+CGR+  +   F E   ++ +T N ++ G+ Q G   +A+
Sbjct: 473 YVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEAL 532

Query: 430 IMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMY 489
            +F +M +  V     T+ S L A A+LA ++ G Q+H   +K  +  +  V NALI +Y
Sbjct: 533 KVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLY 592

Query: 490 AKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFV 549
            KCGS  DA++ F  M++ NEVSWN +I+  S HG   E L +FD M++ G +PN++TF+
Sbjct: 593 GKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFI 652

Query: 550 GVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF 609
           GVL+ACS+ GL+E+G +YFKSM   YGI P  +HY  ++ + GRAG LD+A K IE +P 
Sbjct: 653 GVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPI 712

Query: 610 QPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW------ 663
               M+WR LL AC +H N+E+G  +A+H+L+ EP D A++VLLSN YA+   W      
Sbjct: 713 AADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQV 772

Query: 664 -----EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDL 718
                ++   KEPG SWIE + +VH F  GD  H     I   L  +N +  K GY  + 
Sbjct: 773 RKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEK 832

Query: 719 SAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRI 764
             +  D  ++ ++    VHSEKLA+ F L  +PP  P+R+IKNLR+
Sbjct: 833 YHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLRV 878



 Score =  285 bits (729), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 180/589 (30%), Positives = 294/589 (49%), Gaps = 25/589 (4%)

Query: 59  YATSLQSCIQNDDL-QTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +A +L++C  N    Q    IH + + +G        N+L+++Y K   +  A ++F+E+
Sbjct: 44  FACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEEL 103

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
             R+ +S+V  + GY  +    EA+GL+  +HR G    P+  ++   VL S   AEL  
Sbjct: 104 SARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSS---VLSSCTKAELFA 160

Query: 178 ---CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF---- 223
               + A  YK G  S  FVG A+I  +  CG    A +VF  +       FN       
Sbjct: 161 QGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHA 220

Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                E AL  F +M+  G  P+  T + +L AC  L  ++     H    K     D  
Sbjct: 221 QCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYI 280

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           +  +LLDLY K G++  A  IF    + +V+ W+ M+  + Q +    + ELFC+M+ A 
Sbjct: 281 MEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAG 340

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           + PNQFT+  +L+ C     +DLG QIHSL V+ G  SD++VS  L+D+Y+K G +E + 
Sbjct: 341 IRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKAR 400

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            +     +++ V+W +MI GYVQ      A+  F +M +  +    +  +S +  CA + 
Sbjct: 401 RVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIN 460

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           A+  G+Q+H     + Y  DV + NAL+++YA+CG I +A   F+ M   + ++ N ++S
Sbjct: 461 AMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVS 520

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           G++  GL  E LKVF  M Q G + N  TFV  LSA +N   ++QG+    + V   G  
Sbjct: 521 GFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQ-IHARVIKTGHS 579

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
              E   +++SL G+ G  + A      +  +  V  W  ++ +C  H 
Sbjct: 580 FETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVS-WNTIITSCSQHG 627



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 148/516 (28%), Positives = 254/516 (49%), Gaps = 22/516 (4%)

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG--WAE 174
           M  R   S   T+ G+       + + LF+   R+   L P  F   L+     G  W +
Sbjct: 1   MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRW-Q 59

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
           + P + A     G      VG  LID +S  G V  AR+VF+ L                
Sbjct: 60  VVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYA 119

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            N   EEAL  + QM   G  P  +  + VL +C   +     +  H    K  +  +++
Sbjct: 120 QNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIF 179

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V  A++ LY + G    A R+F +MP +D + ++ +I+ +AQ      A+E+F  M+ + 
Sbjct: 180 VGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSG 239

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           ++P+  T  S+L ACA++  L  G Q+HS + + G+ SD  +  +L+D+Y KCG +E ++
Sbjct: 240 LSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETAL 299

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            +F  S + N V WN M+V + Q+ ++ K+  +F +M    +   + TY  +LR C    
Sbjct: 300 VIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTR 359

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
            ++ G Q+H L+VK  ++ D+ V+  LIDMY+K G +  AR V +M+ + + VSW +MI+
Sbjct: 360 EIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIA 419

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG-EAYFKSMVANYGI 577
           GY  H    + L  F  MQ+ G  P+N+     +S C+    + QG + + +  V+ Y  
Sbjct: 420 GYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSG 479

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSV 613
           +  I  + ++V+L  R G + +A    E +  +  +
Sbjct: 480 DVSI--WNALVNLYARCGRIREAFSSFEEMELKDGI 513


>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g57430, chloroplastic; Flags: Precursor
 gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 288/797 (36%), Positives = 434/797 (54%), Gaps = 48/797 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLD-LFATNVLLNVYVKLNRLPDATKL 113
           +++++   L++     D++    IH  V K G  +D +   N L+N+Y K        K+
Sbjct: 96  DNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKV 155

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           FD + ERN +S+ + I       ++  A+  F  +  E  E + F   + +    ++   
Sbjct: 156 FDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMP 215

Query: 174 E---LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------- 219
           E   +   V A   + G + N+F+   L+  +   G +  + KV  G F           
Sbjct: 216 EGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLA-SSKVLLGSFGGRDLVTWNTV 273

Query: 220 ------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT-C 272
                 N+   EAL +  +M   G +P+ FT + VL AC  L+ +R  K  H  ALK   
Sbjct: 274 LSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGS 333

Query: 273 YEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFC 332
            + + +V  AL+D+Y    ++ + RR+F+ M  + +  W+ MIA Y+Q +   +A+ LF 
Sbjct: 334 LDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFI 393

Query: 333 RMRQ-AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC 391
            M + A +  N  T   V+ AC           IH  VV+ GL  D FV N LMD+Y++ 
Sbjct: 394 GMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRL 453

Query: 392 GRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKM--LEEQV--------- 440
           G+++ ++ +F +   R+ VTWNTMI GYV       A+++  KM  LE +V         
Sbjct: 454 GKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSL 513

Query: 441 PATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARL 500
               +T  ++L +CA+L+AL  G ++H   +K N   DV V +AL+DMYAKCG +  +R 
Sbjct: 514 KPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRK 573

Query: 501 VFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGL 560
           VFD +   N ++WN +I  Y MHG   E + +  +M  +G +PN +TF+ V +ACS+ G+
Sbjct: 574 VFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGM 633

Query: 561 LEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQ-PSVMIWRAL 619
           +++G   F  M  +YG+EP  +HY  +V LLGRAG + +A +L+  +P        W +L
Sbjct: 634 VDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSL 693

Query: 620 LGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS----------- 668
           LGA  IHNN+EIG ++AQ+++  EP   + +VLL+NIY+ A  W+KA             
Sbjct: 694 LGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVR 753

Query: 669 KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVRED 728
           KEPG SWIE+   VH F AGD+SH     + G LE L  + RK GY+PD S VL +V ED
Sbjct: 754 KEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEED 813

Query: 729 EKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDV 788
           EKE  L  HSEKLA+AF +    P + IR+ KNLR+C DCH A K ISKIV REII+RDV
Sbjct: 814 EKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDV 873

Query: 789 HRFHHFQDGCCSCGDFW 805
            RFH F++G CSCGD+W
Sbjct: 874 RRFHRFKNGTCSCGDYW 890



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 139/537 (25%), Positives = 253/537 (47%), Gaps = 36/537 (6%)

Query: 125 FVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVY 184
           ++  ++    S+   EAV  +  +   G + + +AF A LK +  +   EL   + A VY
Sbjct: 65  WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124

Query: 185 KLGHDSNAF-VGTALIDAFSVCGCVEFARKVFDGLFN----------------DCFEEAL 227
           K G+  ++  V   L++ +  CG      KVFD +                  + +E AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184

Query: 228 NFFSQMRAVGFKPNNFTFAFVLKACLGL---DTIRVAKSAHGCALKTCYEMDLYVAVALL 284
             F  M     +P++FT   V+ AC  L   + + + K  H   L+   E++ ++   L+
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLV 243

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
            +Y K G++++++ +      +D++ W+ +++   Q +  ++A+E    M    V P++F
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD-VFVSNALMDVYAKCGRMENSVELFAE 403
           T  SVL AC+ +E L  G ++H+  ++ G L +  FV +AL+D+Y  C ++ +   +F  
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 363

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ-VPATEVTYSSVLRACASLAALEP 462
              R    WN MI GY Q     +A+++F  M E   + A   T + V+ AC    A   
Sbjct: 364 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR 423

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
              +H   VK   D D  V N L+DMY++ G I  A  +F  M D + V+WN MI+GY  
Sbjct: 424 KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVF 483

Query: 523 HGLSAEVLKVFDLMQ-----------QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSM 571
                + L +   MQ           +   +PN++T + +L +C+    L +G+      
Sbjct: 484 SEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYA 543

Query: 572 VANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
           + N  +   +   +++V +  + G L  + K+ + IP Q +V+ W  ++ A  +H N
Sbjct: 544 IKN-NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598


>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 292/800 (36%), Positives = 435/800 (54%), Gaps = 47/800 (5%)

Query: 39  CSNSTTTPIT---FSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATN 95
           C+N+ T+ I    F ++  N+   AT+L   +Q         I  Q++  G   DL +  
Sbjct: 3   CTNTATSAIRGQRFFLTLLNN---ATTLSQLLQ---------IQAQLILHGIHYDLSSIT 50

Query: 96  VLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHEL 155
            L + +  L  +    +LF+++ + +   F   I+G++ +     ++ L++ L R+   L
Sbjct: 51  KLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHL-RKKTNL 109

Query: 156 NPFAFTAFLKVLVSMGWAELCPCVFACVYKL--GHDSNAFVGTALIDAFSVCGCVEFARK 213
            P  FT    +  +    +    V    + +  G  SN FVG+A++D +      E ARK
Sbjct: 110 RPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARK 169

Query: 214 VFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDT 257
           VFD +                 N  FE+++  F  M  VG   ++ T A VL A   L  
Sbjct: 170 VFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQE 229

Query: 258 IRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIAR 317
            R+       A K     D+YV   L+ LY+K G+    R +F+++ + D+I ++ MI+ 
Sbjct: 230 YRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISG 289

Query: 318 YAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD 377
           Y     +  AV LF  +  +    N  T V ++        L L   I +L +++G++  
Sbjct: 290 YTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQ 349

Query: 378 VFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
             VS AL  VY +   ++ + +LF ESP+++  +WN MI GY Q G   +A+ +F +M+ 
Sbjct: 350 PSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMP 409

Query: 438 EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITD 497
           +  P   VT +S+L ACA L AL  G  VH L      + +V V+ AL+DMYAKCGSI +
Sbjct: 410 QLSP-NPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVE 468

Query: 498 ARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSN 557
           AR +FD+M D N V+WNAMI+GY +HG   E LK+F  M Q G  P  +TF+ +L ACS+
Sbjct: 469 ARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSH 528

Query: 558 GGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWR 617
            GL+ +G   F SM  NYG +P  EHY  MV +LGRAG L  A + IE +P +P   +W 
Sbjct: 529 SGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWG 588

Query: 618 ALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS--------- 668
           ALLGAC+IH N E+  ++++ +   +PE+   +VLLSNIY+  R++ KAAS         
Sbjct: 589 ALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRK 648

Query: 669 --KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPD-LSAVLRDV 725
             K PG + IE     + F +GD SH     I  MLE L  K R+AGY  + ++  L DV
Sbjct: 649 LAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDV 708

Query: 726 REDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIII 785
            ++EKE  + VHSEKLA+AF L    P + IRIIKNLR+C+DCHTA K ISKI +R I++
Sbjct: 709 EDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVV 768

Query: 786 RDVHRFHHFQDGCCSCGDFW 805
           RD +RFHHF++G CSCGD+W
Sbjct: 769 RDANRFHHFKNGICSCGDYW 788


>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
          Length = 803

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 288/797 (36%), Positives = 434/797 (54%), Gaps = 48/797 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLD-LFATNVLLNVYVKLNRLPDATKL 113
           +++++   L++     D++    IH  V K G  +D +   N L+N+Y K        K+
Sbjct: 9   DNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKV 68

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           FD + ERN +S+ + I       ++  A+  F  +  E  E + F   + +    ++   
Sbjct: 69  FDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMP 128

Query: 174 E---LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------- 219
           E   +   V A   + G + N+F+   L+  +   G +  + KV  G F           
Sbjct: 129 EGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLA-SSKVLLGSFGGRDLVTWNTV 186

Query: 220 ------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT-C 272
                 N+   EAL +  +M   G +P+ FT + VL AC  L+ +R  K  H  ALK   
Sbjct: 187 LSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGS 246

Query: 273 YEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFC 332
            + + +V  AL+D+Y    ++ + RR+F+ M  + +  W+ MIA Y+Q +   +A+ LF 
Sbjct: 247 LDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFI 306

Query: 333 RMRQ-AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC 391
            M + A +  N  T   V+ AC           IH  VV+ GL  D FV N LMD+Y++ 
Sbjct: 307 GMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRL 366

Query: 392 GRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKM--LEEQV--------- 440
           G+++ ++ +F +   R+ VTWNTMI GYV       A+++  KM  LE +V         
Sbjct: 367 GKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSL 426

Query: 441 PATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARL 500
               +T  ++L +CA+L+AL  G ++H   +K N   DV V +AL+DMYAKCG +  +R 
Sbjct: 427 KPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRK 486

Query: 501 VFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGL 560
           VFD +   N ++WN +I  Y MHG   E + +  +M  +G +PN +TF+ V +ACS+ G+
Sbjct: 487 VFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGM 546

Query: 561 LEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQ-PSVMIWRAL 619
           +++G   F  M  +YG+EP  +HY  +V LLGRAG + +A +L+  +P        W +L
Sbjct: 547 VDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSL 606

Query: 620 LGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS----------- 668
           LGA  IHNN+EIG ++AQ+++  EP   + +VLL+NIY+ A  W+KA             
Sbjct: 607 LGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVR 666

Query: 669 KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVRED 728
           KEPG SWIE+   VH F AGD+SH     + G LE L  + RK GY+PD S VL +V ED
Sbjct: 667 KEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEED 726

Query: 729 EKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDV 788
           EKE  L  HSEKLA+AF +    P + IR+ KNLR+C DCH A K ISKIV REII+RDV
Sbjct: 727 EKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDV 786

Query: 789 HRFHHFQDGCCSCGDFW 805
            RFH F++G CSCGD+W
Sbjct: 787 RRFHRFKNGTCSCGDYW 803



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/377 (32%), Positives = 195/377 (51%), Gaps = 8/377 (2%)

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD-LYVAVALLDLYTKSG 291
           M  +G KP+N+ F  +LKA   L  + + K  H    K  Y +D + VA  L++LY K G
Sbjct: 1   MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60

Query: 292 EISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQ 351
           +     ++F+ + +++ + W+ +I+     +    A+E F  M    V P+ FT VSV+ 
Sbjct: 61  DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 120

Query: 352 ACATM---EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRN 408
           AC+ +   EGL +G Q+H+  +R G L+  F+ N L+ +Y K G++ +S  L      R+
Sbjct: 121 ACSNLPMPEGLMMGKQVHAYGLRKGELNS-FIINTLVAMYGKLGKLASSKVLLGSFGGRD 179

Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHC 468
            VTWNT++    Q  ++ +A+    +M+ E V   E T SSVL AC+ L  L  G ++H 
Sbjct: 180 LVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHA 239

Query: 469 LTVK-ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSA 527
             +K  + D +  V +AL+DMY  C  +   R VFD M D     WNAMI+GYS +    
Sbjct: 240 YALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDK 299

Query: 528 EVLKVFDLMQQR-GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTS 586
           E L +F  M++  G   N+ T  GV+ AC   G   + EA     V   G++       +
Sbjct: 300 EALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEA-IHGFVVKRGLDRDRFVQNT 358

Query: 587 MVSLLGRAGHLDKAAKL 603
           ++ +  R G +D A ++
Sbjct: 359 LMDMYSRLGKIDIAMRI 375



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 141/288 (48%), Gaps = 6/288 (2%)

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD-VFVSNALMDVYAKCGRMENS 397
           + P+ + F ++L+A A ++ ++LG QIH+ V + G   D V V+N L+++Y KCG     
Sbjct: 6   IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 65

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
            ++F    +RN V+WN++I       +   A+  F  ML+E V  +  T  SV+ AC++L
Sbjct: 66  YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL 125

Query: 458 AALEP---GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
              E    G QVH   ++   +++  + N L+ MY K G +  ++++       + V+WN
Sbjct: 126 PMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWN 184

Query: 515 AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
            ++S    +    E L+    M   G  P+  T   VL ACS+  +L  G+      + N
Sbjct: 185 TVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKN 244

Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
             ++      +++V +      +    ++ +G+ F   + +W A++  
Sbjct: 245 GSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM-FDRKIGLWNAMIAG 291


>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
          Length = 890

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 288/797 (36%), Positives = 434/797 (54%), Gaps = 48/797 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLD-LFATNVLLNVYVKLNRLPDATKL 113
           +++++   L++     D++    IH  V K G  +D +   N L+N+Y K        K+
Sbjct: 96  DNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKV 155

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           FD + ERN +S+ + I       ++  A+  F  +  E  E + F   + +    ++   
Sbjct: 156 FDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMP 215

Query: 174 E---LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------- 219
           E   +   V A   + G + N+F+   L+  +   G +  + KV  G F           
Sbjct: 216 EGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLA-SSKVLLGSFGGRDLVTWNTV 273

Query: 220 ------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT-C 272
                 N+   EAL +  +M   G +P+ FT + VL AC  L+ +R  K  H  ALK   
Sbjct: 274 LSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGS 333

Query: 273 YEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFC 332
            + + +V  AL+D+Y    ++ + RR+F+ M  + +  W+ MIA Y+Q +   +A+ LF 
Sbjct: 334 LDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFI 393

Query: 333 RMRQ-AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC 391
            M + A +  N  T   V+ AC           IH  VV+ GL  D FV N LMD+Y++ 
Sbjct: 394 GMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRL 453

Query: 392 GRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKM--LEEQV--------- 440
           G+++ ++ +F +   R+ VTWNTMI GYV       A+++  KM  LE +V         
Sbjct: 454 GKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSL 513

Query: 441 PATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARL 500
               +T  ++L +CA+L+AL  G ++H   +K N   DV V +AL+DMYAKCG +  +R 
Sbjct: 514 KPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRK 573

Query: 501 VFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGL 560
           VFD +   N ++WN +I  Y MHG   E + +  +M  +G +PN +TF+ V +ACS+ G+
Sbjct: 574 VFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGM 633

Query: 561 LEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQ-PSVMIWRAL 619
           +++G   F  M  +YG+EP  +HY  +V LLGRAG + +A +L+  +P        W +L
Sbjct: 634 VDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSL 693

Query: 620 LGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS----------- 668
           LGA  IHNN+EIG ++AQ+++  EP   + +VLL+NIY+ A  W+KA             
Sbjct: 694 LGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVR 753

Query: 669 KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVRED 728
           KEPG SWIE+   VH F AGD+SH     + G LE L  + RK GY+PD S VL +V ED
Sbjct: 754 KEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEED 813

Query: 729 EKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDV 788
           EKE  L  HSEKLA+AF +    P + IR+ KNLR+C DCH A K ISKIV REII+RDV
Sbjct: 814 EKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDV 873

Query: 789 HRFHHFQDGCCSCGDFW 805
            RFH F++G CSCGD+W
Sbjct: 874 RRFHRFKNGTCSCGDYW 890



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 139/537 (25%), Positives = 253/537 (47%), Gaps = 36/537 (6%)

Query: 125 FVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVY 184
           ++  ++    S+   EAV  +  +   G + + +AF A LK +  +   EL   + A VY
Sbjct: 65  WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124

Query: 185 KLGHDSNAF-VGTALIDAFSVCGCVEFARKVFDGLFN----------------DCFEEAL 227
           K G+  ++  V   L++ +  CG      KVFD +                  + +E AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184

Query: 228 NFFSQMRAVGFKPNNFTFAFVLKACLGL---DTIRVAKSAHGCALKTCYEMDLYVAVALL 284
             F  M     +P++FT   V+ AC  L   + + + K  H   L+   E++ ++   L+
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLV 243

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
            +Y K G++++++ +      +D++ W+ +++   Q +  ++A+E    M    V P++F
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD-VFVSNALMDVYAKCGRMENSVELFAE 403
           T  SVL AC+ +E L  G ++H+  ++ G L +  FV +AL+D+Y  C ++ +   +F  
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 363

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ-VPATEVTYSSVLRACASLAALEP 462
              R    WN MI GY Q     +A+++F  M E   + A   T + V+ AC    A   
Sbjct: 364 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR 423

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
              +H   VK   D D  V N L+DMY++ G I  A  +F  M D + V+WN MI+GY  
Sbjct: 424 KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVF 483

Query: 523 HGLSAEVLKVFDLMQ-----------QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSM 571
                + L +   MQ           +   +PN++T + +L +C+    L +G+      
Sbjct: 484 SEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYA 543

Query: 572 VANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
           + N  +   +   +++V +  + G L  + K+ + IP Q +V+ W  ++ A  +H N
Sbjct: 544 IKN-NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598


>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 267/781 (34%), Positives = 429/781 (54%), Gaps = 31/781 (3%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           S    H  A  L+ C    +L   + +   V+K G   +      L++++ K   + +A 
Sbjct: 45  SHVYKHPAAVLLELCTSMKELHQIIPL---VIKNGLYNEHLFQTKLVSLFSKYGSINEAA 101

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
           ++F+ + ++    + T ++GY  +S    A+     +  +  +   + FT  LKV     
Sbjct: 102 RVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNA 161

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--------------- 216
             +    +   +      +N F  T +++ ++ C  ++ A K+FD               
Sbjct: 162 DLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIA 221

Query: 217 GLFNDCF-EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
           G   + F ++AL    +M+  G +P++ T   VL A   +  + V KS HG A++  +  
Sbjct: 222 GFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAK 281

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
            + ++ AL D+Y+K G +  AR IF+ M +K V+ W+ M+  Y Q      A+ +F +M 
Sbjct: 282 LVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKML 341

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
           +  + P   T +  L ACA +  L+ G  +H  V ++ L SD+ V N+L+ +Y+KC R++
Sbjct: 342 EEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVD 401

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
            + ++F     R HV+WN MI+GY Q G V +A+  FS+M    +     T  SV+ A A
Sbjct: 402 IASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALA 461

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
            L+       +H L +++  D ++ V  AL+DMY+KCG+I  AR +FDM++D + ++WNA
Sbjct: 462 ELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNA 521

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           MI GY  HGL    L +FD M++    PN++T++ V+SACS+ GL+++G  +FKSM  +Y
Sbjct: 522 MIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDY 581

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS 635
           G+EP ++HY +MV LLGRAG + +A   IE +P  P + ++ A  GAC IH N+E+G  +
Sbjct: 582 GLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKA 641

Query: 636 AQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHY 684
           A+ + +  P++   HVLL+NIYA    W K A            K PG S +E +  VH 
Sbjct: 642 AKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHS 701

Query: 685 FRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALA 744
           F +G T+H     I   LE L  + + AGY+PD + +L DV +D +E+ L  HSEKLA+A
Sbjct: 702 FYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIA 760

Query: 745 FALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
           F L    P + I + KNLR+C DCH A K IS +  REII+RD+ RFHHF++G CSCGD+
Sbjct: 761 FGLLNTSPGTTIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDY 820

Query: 805 W 805
           W
Sbjct: 821 W 821


>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 292/800 (36%), Positives = 435/800 (54%), Gaps = 47/800 (5%)

Query: 39  CSNSTTTPIT---FSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATN 95
           C+N+ T+ I    F ++  N+   AT+L   +Q         I  Q++  G   DL +  
Sbjct: 3   CTNTATSAIRGQRFFLTLLNN---ATTLSQLLQ---------IQAQLILHGIHYDLSSIT 50

Query: 96  VLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHEL 155
            L + +  L  +    +LF+++ + +   F   I+G++ +     ++ L++ L R+   L
Sbjct: 51  KLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHL-RKXTNL 109

Query: 156 NPFAFTAFLKVLVSMGWAELCPCVFACVYKL--GHDSNAFVGTALIDAFSVCGCVEFARK 213
            P  FT    +  +    +    V    + +  G  SN FVG+A++D +      E ARK
Sbjct: 110 RPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARK 169

Query: 214 VFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDT 257
           VFD +                 N  FE+++  F  M  VG   ++ T A VL A   L  
Sbjct: 170 VFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQE 229

Query: 258 IRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIAR 317
            R+       A K     D+YV   L+ LY+K G+    R +F+++ + D+I ++ MI+ 
Sbjct: 230 YRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISG 289

Query: 318 YAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD 377
           Y     +  AV LF  +  +    N  T V ++        L L   I +L +++G++  
Sbjct: 290 YTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQ 349

Query: 378 VFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
             VS AL  VY +   ++ + +LF ESP+++  +WN MI GY Q G   +A+ +F +M+ 
Sbjct: 350 PSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMP 409

Query: 438 EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITD 497
           +  P   VT +S+L ACA L AL  G  VH L      + +V V+ AL+DMYAKCGSI +
Sbjct: 410 QLSP-NPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVE 468

Query: 498 ARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSN 557
           AR +FD+M D N V+WNAMI+GY +HG   E LK+F  M Q G  P  +TF+ +L ACS+
Sbjct: 469 ARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSH 528

Query: 558 GGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWR 617
            GL+ +G   F SM  NYG +P  EHY  MV +LGRAG L  A + IE +P +P   +W 
Sbjct: 529 SGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWG 588

Query: 618 ALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS--------- 668
           ALLGAC+IH N E+  ++++ +   +PE+   +VLLSNIY+  R++ KAAS         
Sbjct: 589 ALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRK 648

Query: 669 --KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPD-LSAVLRDV 725
             K PG + IE     + F +GD SH     I  MLE L  K R+AGY  + ++  L DV
Sbjct: 649 LAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDV 708

Query: 726 REDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIII 785
            ++EKE  + VHSEKLA+AF L    P + IRIIKNLR+C+DCHTA K ISKI +R I++
Sbjct: 709 EDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVV 768

Query: 786 RDVHRFHHFQDGCCSCGDFW 805
           RD +RFHHF++G CSCGD+W
Sbjct: 769 RDANRFHHFKNGICSCGDYW 788


>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
 gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
          Length = 815

 Score =  497 bits (1280), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 269/753 (35%), Positives = 425/753 (56%), Gaps = 29/753 (3%)

Query: 81  QVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVE 140
           Q+L +    + F+ +++++ YVK   L  A ++FD+  ER  +++ T I  Y+ S++F +
Sbjct: 64  QLLDQMPNRNSFSIDIIISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGD 123

Query: 141 AVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALID 200
           A  LF+ +HR G + +   +   L     +  A+      A + KLGH  N  V   L+D
Sbjct: 124 AFKLFAEMHRSGSQPDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLD 183

Query: 201 AFSVCGCVEFARKVF---------------DGLFNDCF-EEALNFFSQMRAVGFKPNNFT 244
           ++   G ++ AR++F                G  N+   EEA+  F +M+ +GFKP++FT
Sbjct: 184 SYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFT 243

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
           FA V+ A +GLD     +  HG  +KT +  +++V  A LD Y+K   ++  R++F EMP
Sbjct: 244 FAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMP 303

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
           + D + ++ +I  YA      ++++LF  ++        F F ++L   A+   L +G Q
Sbjct: 304 ELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQ 363

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
           +H+ VV      D  VSN+L+D+YAKCG+ E +  +F     R+ V W  MI   VQ G 
Sbjct: 364 LHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGL 423

Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA 484
               + +F +M    V A + T++ VL+A A+LA++  G Q+H   +++ + M+V    A
Sbjct: 424 HENGLKLFYEMRRANVSADQATFACVLKASANLASILLGKQLHSCVIRSGF-MNVYSGCA 482

Query: 485 LIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPN 544
           L+DMYA C SI DA   F+ M++ N V+WNA++S Y+ +G     LK F+ M   G++P+
Sbjct: 483 LLDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPD 542

Query: 545 NLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLI 604
           +++F+ +L+ACS+  L+E+G  YF  M   Y + P  EHYT+MV  L R+G  D+A KL+
Sbjct: 543 SVSFLCILTACSHCRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLM 602

Query: 605 EGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEP-EDEATHVLLSNIYAMARSW 663
             +PF+P  ++W ++L +C IH N  + R +A  + + +   D A +V +SNI+A A  W
Sbjct: 603 GQMPFEPDEIVWTSVLNSCRIHKNYALARKAAGQLFNMKVLRDAAPYVTMSNIFAEAGQW 662

Query: 664 E-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKA 712
           +           +   K P  SW+E +  VH F A D  H     I   +E L  +  K 
Sbjct: 663 DSVVKVKKAMRDRGVRKLPAYSWVEIKHKVHVFSANDDKHPQQLEILRKIEMLAEQMEKE 722

Query: 713 GYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAI 772
           GY PD+S   ++V ++ K   L  HSE+LA+AFAL   P  SPI ++KNLR C DCH AI
Sbjct: 723 GYDPDISCAHQNVDKESKIDSLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAI 782

Query: 773 KIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           K+ISKIV REI +RD +RFHHF+DG CSCGD+W
Sbjct: 783 KVISKIVGREITVRDSNRFHHFRDGSCSCGDYW 815



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 137/493 (27%), Positives = 240/493 (48%), Gaps = 37/493 (7%)

Query: 58  SYATSLQSCIQNDDLQTAMTI---HCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +Y T L  C   +DL+ A  +   H Q++K G+ L+    N LL+ Y K   L  A +LF
Sbjct: 142 TYITLLTGC---NDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLF 198

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
            EM   +++SF   I GY  +    EA+ LF  +   G + + F F A +   V +    
Sbjct: 199 LEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTA 258

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF------DGLFNDCF----- 223
               +   V K     N FVG A +D +S   CV   RK+F      DG+  +       
Sbjct: 259 FGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYA 318

Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                +E+++ F +++   F   NF F  +L        +++ +  H   + +  + D  
Sbjct: 319 WVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFR 378

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V+ +L+D+Y K G+   A RIF  +  +  +PW+ MI+   Q  L  + ++LF  MR+A 
Sbjct: 379 VSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRAN 438

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           V+ +Q TF  VL+A A +  + LG Q+HS V+R G + +V+   AL+D+YA C  +++++
Sbjct: 439 VSADQATFACVLKASANLASILLGKQLHSCVIRSGFM-NVYSGCALLDMYANCASIKDAI 497

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
           + F E  +RN VTWN ++  Y Q G+    +  F +M+        V++  +L AC+   
Sbjct: 498 KTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCR 557

Query: 459 ALEPGMQ-------VHCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNE 510
            +E G++       V+ L  K  +        A++D   + G   +A +L+  M  + +E
Sbjct: 558 LVEEGLKYFNDMSGVYNLAPKREH------YTAMVDALCRSGRFDEAEKLMGQMPFEPDE 611

Query: 511 VSWNAMISGYSMH 523
           + W ++++   +H
Sbjct: 612 IVWTSVLNSCRIH 624



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 62/290 (21%), Positives = 116/290 (40%), Gaps = 31/290 (10%)

Query: 47  ITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNR 106
           + F+  +  +  + T L     + DLQ    +H QV+      D   +N L+++Y K  +
Sbjct: 333 LQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGK 392

Query: 107 LPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV 166
             +A ++F  +  R+T+ +   I            + LF  + R     +   F   LK 
Sbjct: 393 FEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKA 452

Query: 167 LVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------- 219
             ++    L   + +CV + G   N + G AL+D ++ C  ++ A K F+ +        
Sbjct: 453 SANLASILLGKQLHSCVIRSGF-MNVYSGCALLDMYANCASIKDAIKTFEEMSERNVVTW 511

Query: 220 ---------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL-------GLDTIRVAKS 263
                    N   +  L  F +M   G++P++ +F  +L AC        GL        
Sbjct: 512 NALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLVEEGLKYFNDMSG 571

Query: 264 AHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWS 312
            +  A K  +        A++D   +SG    A ++  +MP + D I W+
Sbjct: 572 VYNLAPKREH------YTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWT 615


>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  497 bits (1280), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 273/798 (34%), Positives = 447/798 (56%), Gaps = 34/798 (4%)

Query: 42  STTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVY 101
           ST   +    S  +  +Y+  L+ CI+         +H ++ +    LD    N L+++Y
Sbjct: 52  STLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLY 111

Query: 102 VKLNRLPDATKLFDEM-PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAF 160
            K  +   AT +F  M   R+ IS+   +  +  ++    A+  F  +   G+  N + F
Sbjct: 112 SKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCF 171

Query: 161 TAFLKVLVSMGWAELCPCVFACVYKLGH-DSNAFVGTALIDAFSVC-GCVEFARKVFDGL 218
            A  +   +  +  +   +F  V K G+  S+  VG  LID F    G +  A KVF+ +
Sbjct: 172 AAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKM 231

Query: 219 FN----------------DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAK 262
                                 EA++ F +M   G++P+ FT + V+ AC  ++ + + +
Sbjct: 232 PERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQ 291

Query: 263 SAHGCALKTCYEMDLYVAVALLDLYTK---SGEISNARRIFEEMPKKDVIPWSFMIARYA 319
             H  A++    +D  V   L+++Y K    G +  AR+IF+++   +V  W+ MI  Y 
Sbjct: 292 QLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYV 351

Query: 320 QTD-LSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDV 378
           Q      +A++LF  M    V PN FTF S L+ACA +  L +G Q+ +  V++G  S  
Sbjct: 352 QKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVN 411

Query: 379 FVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE 438
            V+N+L+ +YA+ GR++++ + F    ++N +++NT+I  Y +     +A+ +F+++ ++
Sbjct: 412 CVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQ 471

Query: 439 QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDA 498
            + A+  T++S+L   AS+  +  G Q+H   +K+   ++  V NALI MY++CG+I  A
Sbjct: 472 GMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESA 531

Query: 499 RLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNG 558
             VF+ M D N +SW ++I+G++ HG + + L++F  M + G RPN +T++ VLSACS+ 
Sbjct: 532 FQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHV 591

Query: 559 GLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRA 618
           GL+ +G  +FKSM   +G+ P +EHY  MV +LGR+G L +A + I  +P++   ++WR 
Sbjct: 592 GLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRT 651

Query: 619 LLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAA 667
            LGAC +H N+E+G+ +A+ I++ EP D A ++LLSN+YA    W           EK  
Sbjct: 652 FLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDEVSNIRKAMKEKNL 711

Query: 668 SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVRE 727
            KE G SW+E +  VH F  GDTSH     I   L+ L++K +K GY+P+L  VL DV E
Sbjct: 712 IKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEE 771

Query: 728 DEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRD 787
           ++KE+ L+ HSEK+A+AF L       PIR+ KNLRIC DCH+AIK IS    REII+RD
Sbjct: 772 EQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGDCHSAIKYISMATGREIIVRD 831

Query: 788 VHRFHHFQDGCCSCGDFW 805
            +RFHH +DG CSC ++W
Sbjct: 832 ANRFHHIKDGRCSCNEYW 849



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/411 (31%), Positives = 211/411 (51%), Gaps = 11/411 (2%)

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           N    +A++    M   G  P+  T++  LK C+   +  +    H    ++  ++D   
Sbjct: 44  NGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVT 103

Query: 280 AVALLDLYTKSGEISNARRIFEEM-PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
             +L+ LY+K G+   A  IF+ M   +D+I WS M++ +A  ++   A+  F  M +  
Sbjct: 104 LNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENG 163

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLL-SDVFVSNALMDVYAKC-GRMEN 396
             PN++ F +  +AC+T E + +G+ I   VV+ G L SDV V   L+D++ K  G + +
Sbjct: 164 YYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVS 223

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           + ++F + P+RN VTW  MI   +Q G  G+A+ +F +M+         T S V+ ACA+
Sbjct: 224 AFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACAN 283

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKC---GSITDARLVFDMMNDWNEVSW 513
           +  L  G Q+H   ++    +D  V   LI+MYAKC   GS+  AR +FD + D N  SW
Sbjct: 284 MELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSW 343

Query: 514 NAMISGYSMH-GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
            AMI+GY    G   E L +F  M      PN+ TF   L AC+N   L  GE  F   V
Sbjct: 344 TAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAV 403

Query: 573 A-NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
              +    C+ +  S++S+  R+G +D A K  + I F+ +++ +  ++ A
Sbjct: 404 KLGFSSVNCVAN--SLISMYARSGRIDDARKAFD-ILFEKNLISYNTVIDA 451


>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 889

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 272/807 (33%), Positives = 425/807 (52%), Gaps = 102/807 (12%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           ++   N+++N Y KL  L DA +LF  MP R+  S+ T + GY  S +F++A+  F ++ 
Sbjct: 94  NVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMR 153

Query: 150 REGHEL-NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCV 208
           R G  L N F F   +K   ++GW E+   +   + K G   +  V T ++D F  CG V
Sbjct: 154 RSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAV 213

Query: 209 EFARKVFDGLFN-----------------------DCFE--------------------- 224
           +FA K F  +                         + FE                     
Sbjct: 214 DFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSG 273

Query: 225 ---EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
              EAL+    M   G + ++ T+   L AC  L ++   K  H   +++   +D YVA 
Sbjct: 274 RAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVAS 333

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           A+++LY K G    ARR+F  +  ++ + W+ +I  + Q     +++ELF +MR   +  
Sbjct: 334 AMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTV 393

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           +QF   +++  C+    + L  Q+HSL ++ G    V +SN+L+ +YAKCG ++N+  +F
Sbjct: 394 DQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIF 453

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKA-------------------------------MI 430
           +   +R+ V+W  M+  Y Q+G +GKA                               + 
Sbjct: 454 SSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLK 513

Query: 431 MFSKML-EEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMY 489
           M+S ML E+ V    VTY ++ R CA + A + G Q+   TVK    +D  V NA+I MY
Sbjct: 514 MYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMY 573

Query: 490 AKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFV 549
           +KCG I++AR +FD ++  + VSWNAMI+GYS HG+  + +++FD M ++G +P+ +++V
Sbjct: 574 SKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYV 633

Query: 550 GVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF 609
            VLS+CS+ GL+++G+ YF  +  ++ + P +EH++ MV LL RAG+L +A  LI+ +P 
Sbjct: 634 AVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPM 693

Query: 610 QPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARS------- 662
           +P+  +W ALL AC  H N E+  L+A+H+ D +  D   ++LL+ IYA A         
Sbjct: 694 KPTAEVWGALLSACKTHGNNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQV 753

Query: 663 ----WEKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDL 718
                +K   K PG SW+E +  VH F+A D SH  +  IR  L+ L  K  + GY+   
Sbjct: 754 RKLMRDKGIKKNPGYSWMEVKNKVHVFKAEDVSHPQVIAIREKLDELMEKIAQLGYV--- 810

Query: 719 SAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKI 778
                     E  R    HSEKLA+AF +  +P   PI I+KNLRIC DCHT IK+IS +
Sbjct: 811 --------RTESLRSEIHHSEKLAVAFGIMNLPAWMPIHIMKNLRICGDCHTVIKLISTV 862

Query: 779 VQREIIIRDVHRFHHFQDGCCSCGDFW 805
             RE +IRD  RFHHF+ G CSCGD+W
Sbjct: 863 TGREFVIRDAVRFHHFKGGSCSCGDYW 889



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 97/425 (22%), Positives = 180/425 (42%), Gaps = 72/425 (16%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
             +S +Y +SL +C +   L     +H QV++   C+D +  + ++ +Y K     +A +
Sbjct: 291 RLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARR 350

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +F  + +RNT+S+   I G+     F E++ LF+ +  E   ++ FA    +    +   
Sbjct: 351 VFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMD 410

Query: 173 AELCPCVFACVYKLGHD-----SNAFVG--------------------------TALIDA 201
             L   + +   K GH      SN+ +                           T ++ A
Sbjct: 411 MCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTA 470

Query: 202 FSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQM-RAVGFKPNNFT 244
           +S  G +  AR+ FDG+                 +   E+ L  +S M       P+  T
Sbjct: 471 YSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVT 530

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
           +  + + C  +   ++     G  +K    +D  V  A++ +Y+K G IS AR+IF+ + 
Sbjct: 531 YVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLS 590

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
           +KD++ W+ MI  Y+Q  +   A+E+F  M +    P+  ++V+VL +C+          
Sbjct: 591 RKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCS---------- 640

Query: 365 IHSLVVRVG------LLSDVFVSNAL------MDVYAKCGRMENSVELFAESP-KRNHVT 411
            HS +V+ G      L  D  VS  L      +D+ A+ G +  +  L  E P K     
Sbjct: 641 -HSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEV 699

Query: 412 WNTMI 416
           W  ++
Sbjct: 700 WGALL 704



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 142/344 (41%), Gaps = 72/344 (20%)

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNAL--------------------- 384
               L++C     L     +H  +V VGL S VF+ N L                     
Sbjct: 31  LADALRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDI 90

Query: 385 -----------MDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
                      M+ YAK G + ++ ELF   P+R+  +WNT++ GY Q G    AM  F 
Sbjct: 91  TEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFV 150

Query: 434 KMLE--EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAK 491
            M    + +P    T+   +++C +L   E  +Q+  L  K  +  D  VA  ++DM+ +
Sbjct: 151 SMRRSGDSLP-NAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVR 209

Query: 492 CGS-------------------------------ITDARLVFDMMNDWNEVSWNAMISGY 520
           CG+                               +  A  +F+ M + + VSWN M+S  
Sbjct: 210 CGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSAL 269

Query: 521 SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPC 580
           S  G + E L V   M  RG R ++ T+   L+AC+    L  G+     ++ +    PC
Sbjct: 270 SQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSL---PC 326

Query: 581 IEHY--TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           I+ Y  ++MV L  + G   +A ++   +  + +V  W  L+G 
Sbjct: 327 IDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVS-WTVLIGG 369


>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 705

 Score =  496 bits (1278), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 262/704 (37%), Positives = 393/704 (55%), Gaps = 27/704 (3%)

Query: 129 IQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGH 188
           + G+     ++   G F  L R G   + +     ++    +   ++   +   VYK G 
Sbjct: 2   VGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGL 61

Query: 189 DSNAFVGTALIDAFSVCGCVEFARKVFD--------------GLFNDCFE--EALNFFSQ 232
           D + FV  AL+D +  C  +E AR +FD              G + +C +  E+L  F +
Sbjct: 62  DLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEK 121

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           MR  G  P+      V+ AC  L  +  A+       +  +++D+ +  A++D+Y K G 
Sbjct: 122 MREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGC 181

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           + +AR IF+ M +K+VI WS MIA Y        A++LF  M  + + P++ T  S+L A
Sbjct: 182 VESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYA 241

Query: 353 CATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTW 412
           C+ ++ L +G  IH +V + GL  D FV  AL+D+Y KC  +E++  LF + P+R+ VTW
Sbjct: 242 CSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTW 301

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
             MI GY + G   +++++F KM EE V   +V   +V+ ACA L A+     +     +
Sbjct: 302 TVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQR 361

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
             + +DV++  A+IDM+AKCG +  AR +FD M + N +SW+AMI+ Y  HG   + L +
Sbjct: 362 KKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDL 421

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
           F +M + G  PN +T V +L ACS+ GL+E+G  +F  M  +Y +   ++HYT +V LLG
Sbjct: 422 FPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLG 481

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVL 652
           RAG LD+A KLIE +  +    +W A LGAC  H +V +   +A  +L+ +P++   ++L
Sbjct: 482 RAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYIL 541

Query: 653 LSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGM 701
           LSNIYA A  WE  A            K PG +WIE     H F  GDT+H     I  M
Sbjct: 542 LSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEM 601

Query: 702 LEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKN 761
           L+ L  K    GY+PD + VL DV E+ K   L+ HSEKLA+AF L   P  +PIRIIKN
Sbjct: 602 LKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKN 661

Query: 762 LRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           LR+C DCHT  K++S I  R II+RD +RFHHF++G CSCGD+W
Sbjct: 662 LRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 705



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 137/491 (27%), Positives = 249/491 (50%), Gaps = 26/491 (5%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           ++++    +++C    +LQ    IH  V K G  LD F    L+++YVK   + DA  LF
Sbjct: 29  DNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLF 88

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D+M ER+ +++   I GY    +  E++ LF  +  EG   +  A    +     +G   
Sbjct: 89  DKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMH 148

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------- 218
               +   + +     +  +GTA+ID ++ CGCVE AR++FD +                
Sbjct: 149 KARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYG 208

Query: 219 FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
           ++    +AL+ F  M + G  P+  T A +L AC  L  +++ +  H    K   ++D +
Sbjct: 209 YHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHF 268

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V  AL+D+Y K  EI +AR +F++MP++D++ W+ MI  YA+   + +++ LF +MR+  
Sbjct: 269 VCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEG 328

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           V P++   V+V+ ACA +  +     I   + R     DV +  A++D++AKCG +E++ 
Sbjct: 329 VVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAR 388

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
           E+F    ++N ++W+ MI  Y   G+  KA+ +F  ML   +   ++T  S+L AC+   
Sbjct: 389 EIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAG 448

Query: 459 ALEPGMQVHCL-----TVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVS 512
            +E G++   L     +V+A    DV     ++D+  + G + +A +L+  M  + +E  
Sbjct: 449 LVEEGLRFFSLMWEDYSVRA----DVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGL 504

Query: 513 WNAMISGYSMH 523
           W A +     H
Sbjct: 505 WGAFLGACRTH 515



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 172/311 (55%), Gaps = 6/311 (1%)

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
           M+  +A+    I+    F  + +    P+ +T   V++AC  ++ L +G  IH +V + G
Sbjct: 1   MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
           L  D FV  AL+D+Y KC  +E++  LF +  +R+ VTW  MI GY + G+  +++++F 
Sbjct: 61  LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120

Query: 434 KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCG 493
           KM EE V   +V   +V+ ACA L A+     +     +  + +DV++  A+IDMYAKCG
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 180

Query: 494 SITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLS 553
            +  AR +FD M + N +SW+AMI+ Y  HG   + L +F +M   G  P+ +T   +L 
Sbjct: 181 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 240

Query: 554 ACSNGGLLEQGEAYFKSMVANYGIEPCIEHYT--SMVSLLGRAGHLDKAAKLIEGIPFQP 611
           ACS+   L+ G      +V  +G++  ++H+   ++V + G+   ++ A  L + +P + 
Sbjct: 241 ACSDLKNLQMGR-LIHHIVYKFGLD--LDHFVCAALVDMYGKCREIEDARFLFDKMP-ER 296

Query: 612 SVMIWRALLGA 622
            ++ W  ++G 
Sbjct: 297 DLVTWTVMIGG 307


>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  496 bits (1277), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 261/622 (41%), Positives = 372/622 (59%), Gaps = 42/622 (6%)

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           AL FF +M   G +PN++TF F+LK+C  L +    K  H   LK  +  D+++  +L++
Sbjct: 113 ALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLIN 172

Query: 286 LYTKSGEISN-------------------------------ARRIFEEMPKKDVIPWSFM 314
           +Y +SGE++N                               AR++F+EMP KDV+ W+ M
Sbjct: 173 MYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAM 232

Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL 374
           IA YAQ   S +A+ LF  MR+A V PN+ T VSVL ACA    LDLGN + S +   GL
Sbjct: 233 IAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGL 292

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
            S++ + NAL+D+Y+KCG ++ + ELF +  +R+ ++WN MI GY  +    +A+ +F +
Sbjct: 293 CSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFRE 352

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGS 494
           ML   V  TE+T+ S+L +CA L A++ G  +H    K    +   ++ +LID+YAKCG+
Sbjct: 353 MLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGN 412

Query: 495 ITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSA 554
           I  AR VFD M   +  SWNAMI G +MHG + +  ++F  M   G  PN +TFVG+LSA
Sbjct: 413 IVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSA 472

Query: 555 CSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVM 614
           C + GL++ G+ +F SMV +Y I P  +HY  M+ LLGRAG  ++A  L++ +  +P   
Sbjct: 473 CKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGA 532

Query: 615 IWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA------- 667
           IW +LLGAC  H  VE+G L A+ + + EP++   +VLLSNIYA A  W+  A       
Sbjct: 533 IWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLN 592

Query: 668 ----SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLR 723
                K PG + IE   +VH F  GD  H     I  MLE ++ + +  G++ D S VL 
Sbjct: 593 DRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQLKVFGFVADTSEVLY 652

Query: 724 DVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREI 783
           D+ E+ KE  L  HSEKLA+AF L    P +PIRIIKNLR+C +CH+A K+ISKI  REI
Sbjct: 653 DMDEEWKEGALSHHSEKLAIAFGLISTKPGTPIRIIKNLRVCRNCHSATKLISKIFNREI 712

Query: 784 IIRDVHRFHHFQDGCCSCGDFW 805
           I RD +RFHHF+DG CSC D+W
Sbjct: 713 IARDRNRFHHFKDGSCSCNDYW 734



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 119/407 (29%), Positives = 203/407 (49%), Gaps = 35/407 (8%)

Query: 257 TIRVAKSAHGCALKTCYEMDLYVAVALLDL--YTKSGEISNARRIFEEMPKKDVIPWSFM 314
           +IR  K  H   +KT     L+    L++    ++SG+IS A  +F  + + ++  W+ M
Sbjct: 41  SIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSM 100

Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL 374
           I   + +     A+  F RM  + V PN +TF  +L++CA +     G QIH+ V+++G 
Sbjct: 101 IRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGF 160

Query: 375 LSDVFVSNALMDVYAKCGRMENSV-------------------------------ELFAE 403
           +SDVF+  +L+++YA+ G M N+                                +LF E
Sbjct: 161 VSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDE 220

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
            P ++ V+WN MI GY Q+G   +A+++F  M +  VP  E T  SVL ACA   AL+ G
Sbjct: 221 MPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLG 280

Query: 464 MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMH 523
             +           ++ + NALIDMY+KCG +  AR +FD M + + +SWN MI GY+  
Sbjct: 281 NSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHM 340

Query: 524 GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEH 583
               E L +F  M   G  P  +TF+ +L +C++ G ++ G+     +  N+        
Sbjct: 341 CSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSV-STSL 399

Query: 584 YTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
            TS++ L  + G++  A ++ +G+  + S+  W A++    +H   +
Sbjct: 400 STSLIDLYAKCGNIVAARQVFDGMKIK-SLASWNAMICGLAMHGQAD 445



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 121/458 (26%), Positives = 195/458 (42%), Gaps = 57/458 (12%)

Query: 47  ITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNR 106
           + +S  E NS+++   L+SC +         IH  VLK G   D+F    L+N+Y +   
Sbjct: 120 MIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGE 179

Query: 107 LPDAT-------------------------------KLFDEMPERNTISFVTTIQGYTVS 135
           + +A                                +LFDEMP ++ +S+   I GY   
Sbjct: 180 MNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQM 239

Query: 136 SQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVG 195
            +  EA+ LF  + +     N     + L         +L   + + +   G  SN  + 
Sbjct: 240 GRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLV 299

Query: 196 TALIDAFSVCGCVEFARKVFDGLFND----------------CFEEALNFFSQMRAVGFK 239
            ALID +S CG ++ AR++FD +                    ++EAL  F +M A G +
Sbjct: 300 NALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVE 359

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           P   TF  +L +C  L  I + K  H    K    +   ++ +L+DLY K G I  AR++
Sbjct: 360 PTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQV 419

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL 359
           F+ M  K +  W+ MI   A    +  A ELF +M    + PN+ TFV +L AC     +
Sbjct: 420 FDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLV 479

Query: 360 DLGNQIHSLVVRVGLLSDVFVS-NALMDVYAKCGRMENSVELFAE-SPKRNHVTWNTMIV 417
           DLG Q  S +V+   +S        ++D+  + G  E +  L      K +   W +++ 
Sbjct: 480 DLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLG 539

Query: 418 -----GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
                G V+LGE+  A  +F   LE   P   V  S++
Sbjct: 540 ACRDHGRVELGEL-VAERLFE--LEPDNPGAYVLLSNI 574


>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  496 bits (1277), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 270/759 (35%), Positives = 419/759 (55%), Gaps = 48/759 (6%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +Y + LQ C     +Q    IH  +      +D    + L+ +YV    L +  ++FD++
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
                  +   + GY     F E++ LF  +     EL      +  K+   +G      
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMR----ELGIRRVESARKLFDELG------ 212

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVG 237
                      D +     ++I  +           V +GL     E+ L+ F QM  +G
Sbjct: 213 -----------DRDVISWNSMISGY-----------VSNGLS----EKGLDLFEQMLLLG 246

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR 297
              +  T   V+  C     + + ++ HG A+K  +  +L +   LLD+Y+KSG +++A 
Sbjct: 247 INTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAI 306

Query: 298 RIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATME 357
           ++FE M ++ V+ W+ MIA YA+  LS  +V LF  M +  ++P+ FT  ++L ACA   
Sbjct: 307 QVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTG 366

Query: 358 GLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIV 417
            L+ G  +H+ +    + SD+FVSNALMD+YAKCG M ++  +F+E   ++ V+WNTMI 
Sbjct: 367 LLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIG 426

Query: 418 GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM 477
           GY +     +A+ +F +M     P + +T + +L ACASLAALE G ++H   ++  + +
Sbjct: 427 GYSKNSLPNEALNLFVEMQYNSKPNS-ITMACILPACASLAALERGQEIHGHILRNGFSL 485

Query: 478 DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQ 537
           D  VANAL+DMY KCG++  ARL+FDM+ + + VSW  MI+GY MHG  +E +  F+ M+
Sbjct: 486 DRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMR 545

Query: 538 QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHL 597
             G  P+ ++F+ +L ACS+ GLL++G  +F  M  N  IEP  EHY  +V LL RAG+L
Sbjct: 546 NSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNL 605

Query: 598 DKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIY 657
            KA K I+ +P +P   IW ALL  C I+++V++    A+H+ + EPE+   +VLL+NIY
Sbjct: 606 SKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIY 665

Query: 658 AMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLN 706
           A A  WE           +   K PG SWIE +G VH F  GD+SH   N I  +L+   
Sbjct: 666 AEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTR 725

Query: 707 MKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICV 766
            + ++ G+ P +   L    + EKE  L  HSEK+A+AF +  +PP   +R+ KNLR+C 
Sbjct: 726 TRMKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCG 785

Query: 767 DCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           DCH   K +SK+V+R+II+RD +RFHHF+DG CSC   W
Sbjct: 786 DCHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGHW 824



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/313 (22%), Positives = 126/313 (40%), Gaps = 39/313 (12%)

Query: 27  GLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKG 86
           GLS  +     +      +P  F+++        T L +C     L+    +H  + +  
Sbjct: 331 GLSDMSVRLFHEMEKEGISPDIFTIT--------TILHACACTGLLENGKDVHNYIKENK 382

Query: 87  NCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFS 146
              DLF +N L+++Y K   + DA  +F EM  ++ +S+ T I GY+ +S   EA+ LF 
Sbjct: 383 MQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFV 442

Query: 147 TLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCG 206
            +       N       L    S+   E    +   + + G   +  V  AL+D +  CG
Sbjct: 443 EMQYNSKP-NSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCG 501

Query: 207 CVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLK 250
            +  AR +FD +                 +    EA+  F++MR  G +P+  +F  +L 
Sbjct: 502 ALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILY 561

Query: 251 ACL-------GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
           AC        G     + ++        C E        ++DL  ++G +S A +  + M
Sbjct: 562 ACSHSGLLDEGWGFFNMMRN------NCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMM 615

Query: 304 P-KKDVIPWSFMI 315
           P + D   W  ++
Sbjct: 616 PIEPDATIWGALL 628



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 33/201 (16%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           S+ NS + A  L +C     L+    IH  +L+ G  LD    N L+++Y+K   L  A 
Sbjct: 448 SKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLAR 507

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV----- 166
            LFD +PE++ +S+   I GY +     EA+  F+ +   G E +  +F + L       
Sbjct: 508 LLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSG 567

Query: 167 LVSMGW---------------AELCPCVFACVYKLGHDSNAFV--------GTALIDAFS 203
           L+  GW               +E   C+   + + G+ S A+           A I    
Sbjct: 568 LLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGAL 627

Query: 204 VCGC-----VEFARKVFDGLF 219
           +CGC     V+ A KV + +F
Sbjct: 628 LCGCRIYHDVKLAEKVAEHVF 648


>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1004

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 260/774 (33%), Positives = 414/774 (53%), Gaps = 27/774 (3%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  + AT L++C     L     +H Q  K G  LDLF  + L+++Y K   +  A+K+F
Sbjct: 212 NEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMF 271

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             MPE+N +++   + GY         + LF ++     + N F  T  LK   +    +
Sbjct: 272 IGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLK 331

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN----------DCF- 223
               + + + K G++ N F+G  L+D +S CG    A  VF  +             C  
Sbjct: 332 QGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLD 391

Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                EE++  F  MR     PN +T   +L A      ++  +S H C  K  +E D+ 
Sbjct: 392 QQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVA 451

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V+ AL+ +Y K+G + +  +++E M  +D+I W+  ++      +    + +F  M +  
Sbjct: 452 VSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEG 511

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
             PN +TF+S+L +C+ +  +  G Q+H+ +++  L  + FV  AL+D+YAKC  +E++ 
Sbjct: 512 FIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDAD 571

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
             F     R+  TW  +I  Y Q  +  KA+  F +M +E V   E T +  L  C+SLA
Sbjct: 572 VAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLA 631

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           +LE G Q+H +  K+ +  D+ V +AL+DMYAKCG + +A  +F+ +   + ++WN +I 
Sbjct: 632 SLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIIC 691

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           GY+ +G   + L  F +M   G  P+ +TF G+LSACS+ GL+E+G+ +F SM  ++GI 
Sbjct: 692 GYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGIS 751

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P ++H   MV +LGR G  D+    I+ +    + +IW  +LGA  +HNN+ +G  +A  
Sbjct: 752 PTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANK 811

Query: 639 ILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRA 687
           + + +PE+E++++LLSNI+A    W+           K   KEPG SW+E  G VH F +
Sbjct: 812 LFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVS 871

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFAL 747
            D SH  +  I   L+ L+ +     Y+P    VL +V E EK+  L  HSE+LAL FAL
Sbjct: 872 HDYSHPQIQEIHLKLDELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFAL 931

Query: 748 FKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSC 801
                   IRI KNLRIC DCH  +K IS I  +EI++RDV RFHHF++G CSC
Sbjct: 932 ISTSSEKKIRIFKNLRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGACSC 985



 Score =  259 bits (663), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 171/578 (29%), Positives = 273/578 (47%), Gaps = 18/578 (3%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           Y++ L+ C     L  A  IH  ++K     D      L+NVY K      A  +  +MP
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
           +R+ +S+   IQG        +++ LF  +  EG   N F     LK        +L   
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG-----------LFNDCFEEA- 226
           + A  +KLG   + FVG+AL+D ++ CG +E A K+F G           L N   +   
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294

Query: 227 ----LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
               L  F  M  +  K N FT   VLK C     ++  +  H   +K  YE + ++   
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCG 354

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+D+Y+K G   +A  +F+ + K D++ WS +I    Q   S ++++LF  MR     PN
Sbjct: 355 LVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPN 414

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           Q+T  S+L A      L  G  IH+ V + G  +DV VSNAL+ +Y K G + +  +L+ 
Sbjct: 415 QYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYE 474

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
               R+ ++WN  + G    G   + + +F  MLEE       T+ S+L +C+ L  +  
Sbjct: 475 SMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHY 534

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G QVH   +K   D +  V  ALIDMYAKC  + DA + F+ ++  +  +W  +I+ Y+ 
Sbjct: 535 GRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQ 594

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
                + L  F  MQQ G +PN  T  G LS CS+   LE G+    SMV   G    + 
Sbjct: 595 TNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQ-LHSMVFKSGHVSDMF 653

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
             +++V +  + G +++A  L E +  +   + W  ++
Sbjct: 654 VGSALVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTII 690


>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 239/599 (39%), Positives = 374/599 (62%), Gaps = 15/599 (2%)

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
           C  +A++ F  M   G+ P+ FT++ VL AC  L  + + K  H   ++    +D+ V  
Sbjct: 36  CARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGC 95

Query: 282 ALLDLYTK---SGEISNARRIFEEMPKKDVIPWSFMIARYAQT-DLSIDAVELFCRMRQA 337
           +L+D+Y K    G + ++R++FE+MP+ +V+ W+ +I  YAQ+ +   +A+ELFC+M   
Sbjct: 96  SLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISG 155

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            + PN F+F SVL+AC  +     G Q++S  V++G+ S   V N+L+ +YA+ GRME++
Sbjct: 156 HIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDA 215

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
            + F    ++N V++N ++ GY +  +  +A ++F+++ +  +  +  T++S+L   AS+
Sbjct: 216 RKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASI 275

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
            A+  G Q+H   +K  Y  +  + NALI MY++CG+I  A  VF+ M D N +SW +MI
Sbjct: 276 GAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMI 335

Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
           +G++ HG +   L++F  M + G +PN +T+V VLSACS+ G++ +G+ +F SM   +GI
Sbjct: 336 TGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGI 395

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQ 637
            P +EHY  MV LLGR+G L +A + I  +P     ++WR LLGAC +H N E+GR +A+
Sbjct: 396 VPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAE 455

Query: 638 HILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFR 686
            IL+ EP+D A ++LLSN++A A  W           E+   KE G SWIE +  VH F 
Sbjct: 456 MILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFH 515

Query: 687 AGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFA 746
            G+TSH     I   L+ L  K ++ GYIPD   VL D+ E++KE++L+ HSEK+A+AF 
Sbjct: 516 VGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFG 575

Query: 747 LFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           L     S PIRI KNLR+C DCHTAIK IS    REI++RD +RFHH ++G CSC D+W
Sbjct: 576 LISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 634



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 110/330 (33%), Positives = 192/330 (58%), Gaps = 8/330 (2%)

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACAT 355
           A ++F++MP+++++ W+ MI R+AQ   + DA++LF  M  +   P++FT+ SVL AC  
Sbjct: 9   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68

Query: 356 MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC---GRMENSVELFAESPKRNHVTW 412
           +  L LG Q+HS V+R+GL  DV V  +L+D+YAKC   G +++S ++F + P+ N ++W
Sbjct: 69  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128

Query: 413 NTMIVGYVQLGEVGKAMI-MFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
             +I  Y Q GE  K  I +F KM+   +     ++SSVL+AC +L+    G QV+   V
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 188

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
           K        V N+LI MYA+ G + DAR  FD++ + N VS+NA++ GY+ +  S E   
Sbjct: 189 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 248

Query: 532 VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEA-YFKSMVANYGIEPCIEHYTSMVSL 590
           +F+ +   G   +  TF  +LS  ++ G + +GE  + + +   Y    CI    +++S+
Sbjct: 249 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCI--CNALISM 306

Query: 591 LGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
             R G+++ A ++   +    +V+ W +++
Sbjct: 307 YSRCGNIEAAFQVFNEME-DRNVISWTSMI 335



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 116/438 (26%), Positives = 224/438 (51%), Gaps = 24/438 (5%)

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A K+FD+MPERN +++   I  +       +A+ LF  +   G+  + F +++ L     
Sbjct: 9   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVC---GCVEFARKVFDGL-------- 218
           +G   L   + + V +LG   +  VG +L+D ++ C   G V+ +RKVF+ +        
Sbjct: 69  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128

Query: 219 ---------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCAL 269
                      +C +EA+  F +M +   +PN+F+F+ VLKAC  L      +  +  A+
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 188

Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVE 329
           K        V  +L+ +Y +SG + +AR+ F+ + +K+++ ++ ++  YA+   S +A  
Sbjct: 189 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 248

Query: 330 LFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYA 389
           LF  +    +  + FTF S+L   A++  +  G QIH  +++ G  S+  + NAL+ +Y+
Sbjct: 249 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 308

Query: 390 KCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSS 449
           +CG +E + ++F E   RN ++W +MI G+ + G   +A+ MF KMLE      E+TY +
Sbjct: 309 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVA 368

Query: 450 VLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMN 506
           VL AC+ +  +  G Q H  ++   + +   + +   ++D+  + G + +A   +  M  
Sbjct: 369 VLSACSHVGMISEG-QKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPL 427

Query: 507 DWNEVSWNAMISGYSMHG 524
             + + W  ++    +HG
Sbjct: 428 MADALVWRTLLGACRVHG 445



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 196/417 (47%), Gaps = 33/417 (7%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKL---NRLPDATKLF 114
           +Y++ L +C +   L     +H +V++ G  LD+     L+++Y K      + D+ K+F
Sbjct: 58  TYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVF 117

Query: 115 DEMPERNTISFVTTIQGYTVSSQF-VEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           ++MPE N +S+   I  Y  S +   EA+ LF  +       N F+F++ LK   ++   
Sbjct: 118 EQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDP 177

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF---------- 223
                V++   KLG  S   VG +LI  ++  G +E ARK FD LF              
Sbjct: 178 YTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGY 237

Query: 224 ------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
                 EEA   F+++   G   + FTFA +L     +  +   +  HG  LK  Y+ + 
Sbjct: 238 AKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQ 297

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
            +  AL+ +Y++ G I  A ++F EM  ++VI W+ MI  +A+   +  A+E+F +M + 
Sbjct: 298 CICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLET 357

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQ-IHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
              PN+ T+V+VL AC+ +  +  G +  +S+    G++  +     ++D+  + G +  
Sbjct: 358 GTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVE 417

Query: 397 SVELFAESP-KRNHVTWNTM-----IVGYVQLGEVGKAMIMFSKMLEEQVPATEVTY 447
           ++E     P   + + W T+     + G  +LG     MI+      EQ P     Y
Sbjct: 418 AMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMIL------EQEPDDPAAY 468



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 139/327 (42%), Gaps = 35/327 (10%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKG----NCLDLFATNVLLNVYVKLNRLPDA 110
           N  S+++ L++C    D  T   ++   +K G    NC+     N L+++Y +  R+ DA
Sbjct: 160 NHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVG----NSLISMYARSGRMEDA 215

Query: 111 TKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSM 170
            K FD + E+N +S+   + GY  + +  EA  LF+ +   G  ++ F F + L    S+
Sbjct: 216 RKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASI 275

Query: 171 GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-------------- 216
           G       +   + K G+ SN  +  ALI  +S CG +E A +VF+              
Sbjct: 276 GAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMI 335

Query: 217 -GLFNDCF-EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT--- 271
            G     F   AL  F +M   G KPN  T+  VL AC  +  I   +       K    
Sbjct: 336 TGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGI 395

Query: 272 CYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIAR---YAQTDLSIDA 327
              M+ Y    ++DL  +SG +  A      MP   D + W  ++     +  T+L   A
Sbjct: 396 VPRMEHY--ACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHA 453

Query: 328 VELFCRMRQAFVAPNQFTFVSVLQACA 354
            E+   + Q    P  +  +S L A A
Sbjct: 454 AEMI--LEQEPDDPAAYILLSNLHASA 478


>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 629

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 239/599 (39%), Positives = 374/599 (62%), Gaps = 15/599 (2%)

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
           C  +A++ F  M   G+ P+ FT++ VL AC  L  + + K  H   ++    +D+ V  
Sbjct: 31  CARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGC 90

Query: 282 ALLDLYTK---SGEISNARRIFEEMPKKDVIPWSFMIARYAQT-DLSIDAVELFCRMRQA 337
           +L+D+Y K    G + ++R++FE+MP+ +V+ W+ +I  YAQ+ +   +A+ELFC+M   
Sbjct: 91  SLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISG 150

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            + PN F+F SVL+AC  +     G Q++S  V++G+ S   V N+L+ +YA+ GRME++
Sbjct: 151 HIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDA 210

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
            + F    ++N V++N ++ GY +  +  +A ++F+++ +  +  +  T++S+L   AS+
Sbjct: 211 RKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASI 270

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
            A+  G Q+H   +K  Y  +  + NALI MY++CG+I  A  VF+ M D N +SW +MI
Sbjct: 271 GAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMI 330

Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
           +G++ HG +   L++F  M + G +PN +T+V VLSACS+ G++ +G+ +F SM   +GI
Sbjct: 331 TGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGI 390

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQ 637
            P +EHY  MV LLGR+G L +A + I  +P     ++WR LLGAC +H N E+GR +A+
Sbjct: 391 VPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAE 450

Query: 638 HILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFR 686
            IL+ EP+D A ++LLSN++A A  W           E+   KE G SWIE +  VH F 
Sbjct: 451 MILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFH 510

Query: 687 AGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFA 746
            G+TSH     I   L+ L  K ++ GYIPD   VL D+ E++KE++L+ HSEK+A+AF 
Sbjct: 511 VGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFG 570

Query: 747 LFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           L     S PIRI KNLR+C DCHTAIK IS    REI++RD +RFHH ++G CSC D+W
Sbjct: 571 LISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 629



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 110/330 (33%), Positives = 192/330 (58%), Gaps = 8/330 (2%)

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACAT 355
           A ++F++MP+++++ W+ MI R+AQ   + DA++LF  M  +   P++FT+ SVL AC  
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63

Query: 356 MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC---GRMENSVELFAESPKRNHVTW 412
           +  L LG Q+HS V+R+GL  DV V  +L+D+YAKC   G +++S ++F + P+ N ++W
Sbjct: 64  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123

Query: 413 NTMIVGYVQLGEVGKAMI-MFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
             +I  Y Q GE  K  I +F KM+   +     ++SSVL+AC +L+    G QV+   V
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
           K        V N+LI MYA+ G + DAR  FD++ + N VS+NA++ GY+ +  S E   
Sbjct: 184 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 243

Query: 532 VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEA-YFKSMVANYGIEPCIEHYTSMVSL 590
           +F+ +   G   +  TF  +LS  ++ G + +GE  + + +   Y    CI    +++S+
Sbjct: 244 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCI--CNALISM 301

Query: 591 LGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
             R G+++ A ++   +    +V+ W +++
Sbjct: 302 YSRCGNIEAAFQVFNEME-DRNVISWTSMI 330



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 116/438 (26%), Positives = 224/438 (51%), Gaps = 24/438 (5%)

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A K+FD+MPERN +++   I  +       +A+ LF  +   G+  + F +++ L     
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVC---GCVEFARKVFDGL-------- 218
           +G   L   + + V +LG   +  VG +L+D ++ C   G V+ +RKVF+ +        
Sbjct: 64  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123

Query: 219 ---------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCAL 269
                      +C +EA+  F +M +   +PN+F+F+ VLKAC  L      +  +  A+
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183

Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVE 329
           K        V  +L+ +Y +SG + +AR+ F+ + +K+++ ++ ++  YA+   S +A  
Sbjct: 184 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 243

Query: 330 LFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYA 389
           LF  +    +  + FTF S+L   A++  +  G QIH  +++ G  S+  + NAL+ +Y+
Sbjct: 244 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 303

Query: 390 KCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSS 449
           +CG +E + ++F E   RN ++W +MI G+ + G   +A+ MF KMLE      E+TY +
Sbjct: 304 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVA 363

Query: 450 VLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMN 506
           VL AC+ +  +  G Q H  ++   + +   + +   ++D+  + G + +A   +  M  
Sbjct: 364 VLSACSHVGMISEG-QKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPL 422

Query: 507 DWNEVSWNAMISGYSMHG 524
             + + W  ++    +HG
Sbjct: 423 MADALVWRTLLGACRVHG 440



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 196/417 (47%), Gaps = 33/417 (7%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKL---NRLPDATKLF 114
           +Y++ L +C +   L     +H +V++ G  LD+     L+++Y K      + D+ K+F
Sbjct: 53  TYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVF 112

Query: 115 DEMPERNTISFVTTIQGYTVSSQF-VEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           ++MPE N +S+   I  Y  S +   EA+ LF  +       N F+F++ LK   ++   
Sbjct: 113 EQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDP 172

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF---------- 223
                V++   KLG  S   VG +LI  ++  G +E ARK FD LF              
Sbjct: 173 YTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGY 232

Query: 224 ------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
                 EEA   F+++   G   + FTFA +L     +  +   +  HG  LK  Y+ + 
Sbjct: 233 AKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQ 292

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
            +  AL+ +Y++ G I  A ++F EM  ++VI W+ MI  +A+   +  A+E+F +M + 
Sbjct: 293 CICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLET 352

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQ-IHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
              PN+ T+V+VL AC+ +  +  G +  +S+    G++  +     ++D+  + G +  
Sbjct: 353 GTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVE 412

Query: 397 SVELFAESP-KRNHVTWNTM-----IVGYVQLGEVGKAMIMFSKMLEEQVPATEVTY 447
           ++E     P   + + W T+     + G  +LG     MI+      EQ P     Y
Sbjct: 413 AMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMIL------EQEPDDPAAY 463



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 139/327 (42%), Gaps = 35/327 (10%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKG----NCLDLFATNVLLNVYVKLNRLPDA 110
           N  S+++ L++C    D  T   ++   +K G    NC+     N L+++Y +  R+ DA
Sbjct: 155 NHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVG----NSLISMYARSGRMEDA 210

Query: 111 TKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSM 170
            K FD + E+N +S+   + GY  + +  EA  LF+ +   G  ++ F F + L    S+
Sbjct: 211 RKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASI 270

Query: 171 GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-------------- 216
           G       +   + K G+ SN  +  ALI  +S CG +E A +VF+              
Sbjct: 271 GAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMI 330

Query: 217 -GLFNDCF-EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT--- 271
            G     F   AL  F +M   G KPN  T+  VL AC  +  I   +       K    
Sbjct: 331 TGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGI 390

Query: 272 CYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIAR---YAQTDLSIDA 327
              M+ Y    ++DL  +SG +  A      MP   D + W  ++     +  T+L   A
Sbjct: 391 VPRMEHY--ACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHA 448

Query: 328 VELFCRMRQAFVAPNQFTFVSVLQACA 354
            E+   + Q    P  +  +S L A A
Sbjct: 449 AEMI--LEQEPDDPAAYILLSNLHASA 473


>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 830

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 282/745 (37%), Positives = 412/745 (55%), Gaps = 33/745 (4%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D+     L+++Y+  + + D  K+F+ M +RN +++ + + GY  +   ++ + LF  + 
Sbjct: 90  DIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMR 149

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
            EG   NPF F++ L ++ S G  +L   V A   K G  S  FV  +L++ ++ CG VE
Sbjct: 150 AEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVE 209

Query: 210 FARKVF---------------DGL-FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL 253
            AR VF                GL  N    EAL  F   R+        T++ V+  C 
Sbjct: 210 EARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCA 269

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWS 312
            L  + +A+  H   LK  +     V  AL+D Y K+G++  A  +F  M   ++V+ W+
Sbjct: 270 NLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWT 329

Query: 313 FMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV 372
            MI    Q      A  LF RMR+  VAPN  T+ ++L    T+       QIH+ V++ 
Sbjct: 330 AMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTIL----TVSEASFPPQIHAQVIKT 385

Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMF 432
                  V  ALM  Y+K    E ++ +F    +++ V+W+ M+  Y Q G+   A   F
Sbjct: 386 NYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAF 445

Query: 433 SKMLEEQVPATEVTYSSVLRACASLAA-LEPGMQVHCLTVKANYDMDVVVANALIDMYAK 491
            KM    +   E T SS + ACAS AA ++ G Q H +++K      + V++AL+ MYA+
Sbjct: 446 IKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYAR 505

Query: 492 CGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGV 551
            GSI +A+ VF+   D + +SWN+M+SGY+ HG S + L VF  M+  G   + LTF+ V
Sbjct: 506 KGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSV 565

Query: 552 LSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQP 611
           +  C++ GL+E+G+ YF  MV +YGI P ++HY  MV L  RAG LD+   LIEG+PF  
Sbjct: 566 IMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPA 625

Query: 612 SVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE------- 664
              IWRALLGAC +H NVE+G+L+A+ +L  EP D AT+VLLSNIY+ A  W+       
Sbjct: 626 GPTIWRALLGACRVHKNVELGKLAAEKLLSLEPLDSATYVLLSNIYSAAGKWKEKDEVRK 685

Query: 665 ----KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSA 720
               K   KE G SWI+ +  VH+F A D SH     I   L  +  K ++ GY PD S 
Sbjct: 686 LMDTKKVRKEAGCSWIQIKNKVHFFIASDKSHPLSEQIYAKLRAMTAKLKQEGYCPDTSF 745

Query: 721 VLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQ 780
           V  DV ED+KE  L +HSE+LALAF L   PP++P+ I KNLR+  D HT +K++S+I  
Sbjct: 746 VPHDVAEDQKEAMLAMHSERLALAFGLIATPPAAPLHIFKNLRVSGDGHTVMKMVSEIED 805

Query: 781 REIIIRDVHRFHHFQDGCCSCGDFW 805
           REI++RD  RFHHF+ G CSCGDFW
Sbjct: 806 REIVMRDCCRFHHFKSGVCSCGDFW 830



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 132/490 (26%), Positives = 231/490 (47%), Gaps = 26/490 (5%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  ++++ L        +     +H Q +K G C  +F  N L+N+Y K   + +A  +F
Sbjct: 156 NPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVF 215

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             M  R+ +S+ T + G  ++ + +EA+ LF         L    ++  + +  ++    
Sbjct: 216 CRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLG 275

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF------------DGLFNDC 222
           L   + + V K G  S   V TAL+DA++  G ++ A  VF              + + C
Sbjct: 276 LARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGC 335

Query: 223 FEE-----ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
            +      A   FS+MR  G  PN+ T++ +L     +         H   +KT YE   
Sbjct: 336 IQNGDIPLAAALFSRMREDGVAPNDLTYSTILT----VSEASFPPQIHAQVIKTNYECTP 391

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
            V  AL+  Y+K      A  IF+ + +KDV+ WS M+  YAQ      A   F +M   
Sbjct: 392 TVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMH 451

Query: 338 FVAPNQFTFVSVLQACAT-MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
            + PN+FT  S + ACA+   G+DLG Q H++ ++      + VS+AL+ +YA+ G +EN
Sbjct: 452 GLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIEN 511

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           +  +F     R+ ++WN+M+ GY Q G   KA+ +F +M  E +    +T+ SV+  CA 
Sbjct: 512 AQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAH 571

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSW 513
              +E G Q   L V+ +Y +   + +   ++D+Y++ G + +   L+  M        W
Sbjct: 572 AGLVEEGQQYFDLMVR-DYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAGPTIW 630

Query: 514 NAMISGYSMH 523
            A++    +H
Sbjct: 631 RALLGACRVH 640



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 149/290 (51%), Gaps = 8/290 (2%)

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGL-LSDVFVSNALMDVYAKCGRMENSVELFAES 404
            + +++ C ++    LG Q+H+L VR G    D+ V  +L+D+Y     + +  ++F   
Sbjct: 58  LLGIIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGM 117

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
            KRN VTW +++ GY+Q G +   M +F +M  E V     T+SSVL   AS   ++ G 
Sbjct: 118 LKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQ 177

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
            VH  ++K      V V N+L++MYAKCG + +AR+VF  M   + VSWN +++G  ++G
Sbjct: 178 HVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNG 237

Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSN---GGLLEQGEAYFKSMVANYGIEPCI 581
              E L++F   +         T+  V++ C+N    GL  Q      S V  +G     
Sbjct: 238 RDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQ----LHSSVLKHGFHSYG 293

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEI 631
              T+++    +AG LDKA  +   +    +V+ W A++  CI + ++ +
Sbjct: 294 NVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPL 343



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 170/378 (44%), Gaps = 29/378 (7%)

Query: 50  SVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD 109
           S++     +Y+T +  C     L  A  +H  VLK G          L++ Y K  +L  
Sbjct: 252 SITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDK 311

Query: 110 ATKLFDEMP-ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLV 168
           A  +F  M   +N +S+   I G   +     A  LFS +  +G   N   ++  L V  
Sbjct: 312 ALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILTV-- 369

Query: 169 SMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND------- 221
               A   P + A V K  ++    VGTAL+ ++S     E A  +F  +          
Sbjct: 370 --SEASFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSA 427

Query: 222 ---CFEE------ALNFFSQMRAVGFKPNNFTFAFVLKAC----LGLDTIRVAKSAHGCA 268
              C+ +      A N F +M   G KPN FT +  + AC     G+D   + +  H  +
Sbjct: 428 MLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVD---LGRQFHAIS 484

Query: 269 LKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAV 328
           +K      L V+ AL+ +Y + G I NA+ +FE    +D++ W+ M++ YAQ   S  A+
Sbjct: 485 IKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKAL 544

Query: 329 ELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR-VGLLSDVFVSNALMDV 387
           ++F +M    +  +  TF+SV+  CA    ++ G Q   L+VR  G+   +     ++D+
Sbjct: 545 DVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDL 604

Query: 388 YAKCGRMENSVELFAESP 405
           Y++ G+++ ++ L    P
Sbjct: 605 YSRAGKLDETMSLIEGMP 622


>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49170, chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 272/798 (34%), Positives = 446/798 (55%), Gaps = 34/798 (4%)

Query: 42  STTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVY 101
           ST   +    S  +  +Y+  L+ CI+         +H ++ +    LD    N L+++Y
Sbjct: 52  STLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLY 111

Query: 102 VKLNRLPDATKLFDEM-PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAF 160
            K  +   AT +F  M   R+ IS+   +  +  ++    A+  F  +   G+  N + F
Sbjct: 112 SKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCF 171

Query: 161 TAFLKVLVSMGWAELCPCVFACVYKLGH-DSNAFVGTALIDAFSVC-GCVEFARKVFDGL 218
            A  +   +  +  +   +F  V K G+  S+  VG  LID F    G +  A KVF+ +
Sbjct: 172 AAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKM 231

Query: 219 FN----------------DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAK 262
                                 EA++ F  M   G++P+ FT + V+ AC  ++ + + +
Sbjct: 232 PERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQ 291

Query: 263 SAHGCALKTCYEMDLYVAVALLDLYTK---SGEISNARRIFEEMPKKDVIPWSFMIARYA 319
             H  A++    +D  V   L+++Y K    G +  AR+IF+++   +V  W+ MI  Y 
Sbjct: 292 QLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYV 351

Query: 320 QTD-LSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDV 378
           Q      +A++LF  M    V PN FTF S L+ACA +  L +G Q+ +  V++G  S  
Sbjct: 352 QKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVN 411

Query: 379 FVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE 438
            V+N+L+ +YA+ GR++++ + F    ++N +++NT+I  Y +     +A+ +F+++ ++
Sbjct: 412 CVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQ 471

Query: 439 QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDA 498
            + A+  T++S+L   AS+  +  G Q+H   +K+   ++  V NALI MY++CG+I  A
Sbjct: 472 GMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESA 531

Query: 499 RLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNG 558
             VF+ M D N +SW ++I+G++ HG + + L++F  M + G RPN +T++ VLSACS+ 
Sbjct: 532 FQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHV 591

Query: 559 GLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRA 618
           GL+ +G  +FKSM   +G+ P +EHY  +V +LGR+G L +A + I  +P++   ++WR 
Sbjct: 592 GLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRT 651

Query: 619 LLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAA 667
            LGAC +H N+E+G+ +A+ I++ EP D A ++LLSN+YA    W           EK  
Sbjct: 652 FLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWDEVSNIRKAMKEKXL 711

Query: 668 SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVRE 727
            KE G SW+E +  VH F  GDTSH     I   L+ L++K +K GY+P+L  VL DV E
Sbjct: 712 IKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEE 771

Query: 728 DEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRD 787
           ++KE+ L+ HSEK+A+AF L       PIR+ KNLRIC DCH+AIK IS    REII+RD
Sbjct: 772 EQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGDCHSAIKYISMATGREIIVRD 831

Query: 788 VHRFHHFQDGCCSCGDFW 805
            +RFHH +DG CSC ++W
Sbjct: 832 ANRFHHIKDGRCSCNEYW 849



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 127/411 (30%), Positives = 209/411 (50%), Gaps = 11/411 (2%)

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           N    +A++    M   G  P+  T++  LK C+   +  +    H    ++  ++D   
Sbjct: 44  NGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVT 103

Query: 280 AVALLDLYTKSGEISNARRIFEEM-PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
             +L+ LY+K G+   A  IF  M   +D+I WS M++ +A  ++   A+  F  M +  
Sbjct: 104 LNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENG 163

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLL-SDVFVSNALMDVYAKC-GRMEN 396
             PN++ F +  +AC+T E + +G+ I   V++ G L SDV V   L+D++ K  G + +
Sbjct: 164 YYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVS 223

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           + ++F + P+RN VTW  MI   +Q G  G+A+ +F  M+         T S V+ ACA+
Sbjct: 224 AFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACAN 283

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKC---GSITDARLVFDMMNDWNEVSW 513
           +  L  G Q+H   ++    +D  V   LI+MYAKC   GS+  AR +FD + D N  SW
Sbjct: 284 MELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSW 343

Query: 514 NAMISGYSMH-GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
            AMI+GY    G   E L +F  M      PN+ TF   L AC+N   L  GE  F   V
Sbjct: 344 TAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAV 403

Query: 573 A-NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
              +    C+ +  S++S+  R+G +D A K  + I F+ +++ +  ++ A
Sbjct: 404 KLGFSSVNCVAN--SLISMYARSGRIDDARKAFD-ILFEKNLISYNTVIDA 451


>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 748

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 268/790 (33%), Positives = 422/790 (53%), Gaps = 96/790 (12%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           Y   L+ C +  +   A  +H  ++K     + F  N L++ Y KL  +P A K+FD+MP
Sbjct: 12  YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 71

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
             N  S+ T +  Y+   +  E   LF  + R                   + W      
Sbjct: 72  HPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRD----------------GVSW------ 109

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF-NDCFEEALNFFSQMRAVG 237
                             +LI  ++ CG +  + K ++ +  ND                
Sbjct: 110 -----------------NSLISGYAGCGLIYQSVKAYNLMLKNDG--------------S 138

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR 297
           F  N  TF+ +L        +++ +  HG  +K  +   ++V   L+D+Y+K G IS AR
Sbjct: 139 FNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCAR 198

Query: 298 RIFEEMPKKDV-------------------------------IPWSFMIARYAQTDLSID 326
           ++F+E+P+K+V                               I W+ MI  + Q  L  D
Sbjct: 199 KVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRD 258

Query: 327 AVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMD 386
           A+++F  M+   +  +Q+TF SVL AC  +  L  G Q+H+ ++R     ++FV++AL+D
Sbjct: 259 AIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVD 318

Query: 387 VYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVT 446
           +Y KC  ++++  +F +   +N V+W  M+VGY Q G   +A+  FS M +  +   + T
Sbjct: 319 MYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFT 378

Query: 447 YSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN 506
             SV+ +CA+LA+LE G Q H   + +     + V+NAL+ +Y KCGSI D+  +F+ ++
Sbjct: 379 LGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEIS 438

Query: 507 DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEA 566
             +EV+W A++SGY+  G + E + +F+ M   G +P+ +TF+GVLSACS  GL+E+G  
Sbjct: 439 FKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQ 498

Query: 567 YFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH 626
            F+SM+  +GI P  +HYT M+ L  RAG +++A   I  +PF P  + W  LL +C  +
Sbjct: 499 IFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFY 558

Query: 627 NNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSW 675
            N++IG+ +A+ +++ +P + A++VLLS++YA    WE+ A            KEPG SW
Sbjct: 559 GNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSW 618

Query: 676 IENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLW 735
           I+ +  VH F A D S+   + I   LE LN K  K GY+PD+++VL DV + EK + L 
Sbjct: 619 IKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPDMNSVLHDVGDSEKIKMLN 678

Query: 736 VHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQ 795
            HSEKLA+AF L  +PP  PIR++KNLR+C DCH A K ISKI  REI++RD  RFH F+
Sbjct: 679 HHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITNREILVRDTARFHLFK 738

Query: 796 DGCCSCGDFW 805
           DG CSCGDFW
Sbjct: 739 DGTCSCGDFW 748



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 110/451 (24%), Positives = 206/451 (45%), Gaps = 51/451 (11%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
            N  +++T L    +   ++    IH  V+K G    +F  + L+++Y K+  +  A K+
Sbjct: 141 LNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKV 200

Query: 114 FDEMPERN-------------------------------TISFVTTIQGYTVSSQFVEAV 142
           FDE+PE+N                               +IS+ + I G+T +    +A+
Sbjct: 201 FDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAI 260

Query: 143 GLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAF 202
            +F  +  E  +++ + F + L     +   +    V A + +  +  N FV +AL+D +
Sbjct: 261 DIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMY 320

Query: 203 SVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRAVGFKPNNFTFA 246
             C  ++ A  VF  +                 N   EEA+  FS M+  G +P++FT  
Sbjct: 321 CKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLG 380

Query: 247 FVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK 306
            V+ +C  L ++      H  AL +     + V+ AL+ LY K G I ++ R+F E+  K
Sbjct: 381 SVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFK 440

Query: 307 DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI- 365
           D + W+ +++ YAQ   + + + LF  M    + P++ TF+ VL AC+    ++ GNQI 
Sbjct: 441 DEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIF 500

Query: 366 HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMIVGYVQLG- 423
            S++   G++        ++D++++ GR+E +     + P   + ++W T++      G 
Sbjct: 501 ESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGN 560

Query: 424 -EVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
            ++GK    F   L+    A+ V  SSV  A
Sbjct: 561 MDIGKWAAEFLMELDPHNTASYVLLSSVYAA 591



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/309 (22%), Positives = 126/309 (40%), Gaps = 33/309 (10%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           + + +++ + L +C     LQ    +H  +++     ++F  + L+++Y K   +  A  
Sbjct: 272 QMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEA 331

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +F +M  +N +S+   + GY  +    EAV  FS + + G E + F   + +    ++  
Sbjct: 332 VFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLAS 391

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-FNDCF-------- 223
            E      A     G  S   V  AL+  +  CG +E + ++F+ + F D          
Sbjct: 392 LEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSG 451

Query: 224 -------EEALNFFSQMRAVGFKPNNFTFAFVLKAC-------LGLDTIRVAKSAHGCAL 269
                   E +  F  M A G KP+  TF  VL AC        G        + HG   
Sbjct: 452 YAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVP 511

Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIAR---YAQTDLSI 325
                 D Y    ++DL++++G I  AR    +MP   D I W+ +++    Y   D+  
Sbjct: 512 I----QDHY--TCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGK 565

Query: 326 DAVELFCRM 334
            A E    +
Sbjct: 566 WAAEFLMEL 574


>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 246/598 (41%), Positives = 363/598 (60%), Gaps = 12/598 (2%)

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           N  F EA+  F  MR  G  P  F F+  ++AC  L +I + K  H  ALK     +L+V
Sbjct: 19  NSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFV 78

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
              L D+Y+K G + +A ++FEEMP KD + W+ MI  Y++     +A+  F +M    V
Sbjct: 79  GSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEV 138

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
             +Q    S L AC  ++    G  +HS VV++G  SD+FV NAL D+Y+K G ME++  
Sbjct: 139 TIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASN 198

Query: 400 LFA-ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
           +F  +S  RN V++  +I GYV+  ++ K + +F ++  + +   E T+SS+++ACA+ A
Sbjct: 199 VFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQA 258

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           ALE G Q+H   +K N+D D  V++ L+DMY KCG +  A   FD + D  E++WN+++S
Sbjct: 259 ALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVS 318

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
            +  HGL  + +K+F+ M  RG +PN +TF+ +L+ CS+ GL+E+G  YF SM   YG+ 
Sbjct: 319 VFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVV 378

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P  EHY+ ++ LLGRAG L +A + I  +PF+P+   W + LGAC IH + E+G+L+A+ 
Sbjct: 379 PGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEK 438

Query: 639 ILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRA 687
           ++  EP++    VLLSNIYA  R WE   S           K PG SW++     H F A
Sbjct: 439 LVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGA 498

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFAL 747
            D SH   + I   L+ L  + + AGY+P   +V  D+ +  KE+ L  HSE++A+AFAL
Sbjct: 499 EDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSMKEKLLHRHSERIAVAFAL 558

Query: 748 FKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
             MP   PI + KNLR+CVDCH+AIK ISK+  R+II+RD  RFHHF DG CSCGD+W
Sbjct: 559 ISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 616



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 108/320 (33%), Positives = 188/320 (58%), Gaps = 5/320 (1%)

Query: 303 MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG 362
           MP+++++ W+ MI+  +Q     +A+  FC MR     P QF F S ++ACA++  +++G
Sbjct: 1   MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
            Q+H L ++ G+ S++FV + L D+Y+KCG M ++ ++F E P ++ V+W  MI GY ++
Sbjct: 61  KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
           GE  +A++ F KM++E+V   +    S L AC +L A + G  VH   VK  ++ D+ V 
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 180

Query: 483 NALIDMYAKCGSITDARLVFDMMND-WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW 541
           NAL DMY+K G +  A  VF + ++  N VS+  +I GY       + L VF  ++++G 
Sbjct: 181 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 240

Query: 542 RPNNLTFVGVLSACSNGGLLEQG-EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKA 600
            PN  TF  ++ AC+N   LEQG + + + M  N+  +P +   + +V + G+ G L++A
Sbjct: 241 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGKCGLLEQA 298

Query: 601 AKLIEGIPFQPSVMIWRALL 620
            +  + I   P+ + W +L+
Sbjct: 299 IQAFDEIG-DPTEIAWNSLV 317



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 213/436 (48%), Gaps = 37/436 (8%)

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
           MP+RN +S+   I G + +S+F EA+  F  +   G     FAF++ ++   S+G  E+ 
Sbjct: 1   MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDC-------------- 222
             +     K G  S  FVG+ L D +S CG +  A KVF+ +   C              
Sbjct: 61  KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEM--PCKDEVSWTAMIDGYS 118

Query: 223 ----FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
               FEEAL  F +M       +       L AC  L   +  +S H   +K  +E D++
Sbjct: 119 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIF 178

Query: 279 VAVALLDLYTKSGEISNARRIFE-EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
           V  AL D+Y+K+G++ +A  +F  +   ++V+ ++ +I  Y +T+     + +F  +R+ 
Sbjct: 179 VGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQ 238

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            + PN+FTF S+++ACA    L+ G Q+H+ V+++    D FVS+ L+D+Y KCG +E +
Sbjct: 239 GIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQA 298

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
           ++ F E      + WN+++  + Q G    A+ +F +M++  V    +T+ S+L  C+  
Sbjct: 299 IQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHA 358

Query: 458 AALEPGMQVHCLTVKANYDMDVVVA--------NALIDMYAKCGSITDARLVFDMMN-DW 508
             +E G+          Y MD            + +ID+  + G + +A+   + M  + 
Sbjct: 359 GLVEEGLDYF-------YSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEP 411

Query: 509 NEVSWNAMISGYSMHG 524
           N   W + +    +HG
Sbjct: 412 NAFGWCSFLGACRIHG 427



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 187/378 (49%), Gaps = 27/378 (7%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           ++++++++C     ++    +HC  LK G   +LF  + L ++Y K   + DA K+F+EM
Sbjct: 43  AFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEM 102

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
           P ++ +S+   I GY+   +F EA+  F  +  E   ++     + L    ++   +   
Sbjct: 103 PCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGR 162

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDC--------------- 222
            V + V KLG +S+ FVG AL D +S  G +E A  VF G+ ++C               
Sbjct: 163 SVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVF-GIDSECRNVVSYTCLIDGYVE 221

Query: 223 ---FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
               E+ L+ F ++R  G +PN FTF+ ++KAC     +      H   +K  ++ D +V
Sbjct: 222 TEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFV 281

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
           +  L+D+Y K G +  A + F+E+     I W+ +++ + Q  L  DA+++F RM    V
Sbjct: 282 SSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGV 341

Query: 340 APNQFTFVSVLQACA----TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
            PN  TF+S+L  C+      EGLD     +S+    G++      + ++D+  + GR++
Sbjct: 342 KPNAITFISLLTGCSHAGLVEEGLDY---FYSMDKTYGVVPGEEHYSCVIDLLGRAGRLK 398

Query: 396 NSVELFAESP-KRNHVTW 412
            + E     P + N   W
Sbjct: 399 EAKEFINRMPFEPNAFGW 416



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 116/275 (42%), Gaps = 32/275 (11%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           + H   ++L +C      +   ++H  V+K G   D+F  N L ++Y K   +  A+ +F
Sbjct: 141 DQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVF 200

Query: 115 DEMPE-RNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
               E RN +S+   I GY  + Q  + + +F  L R+G E N F F++ +K   +    
Sbjct: 201 GIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAAL 260

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDC----------- 222
           E    + A V K+  D + FV + L+D +  CG +E A + FD + +             
Sbjct: 261 EQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVF 320

Query: 223 -----FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
                 ++A+  F +M   G KPN  TF  +L  C     +          L   Y MD 
Sbjct: 321 GQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEE-------GLDYFYSMDK 373

Query: 278 YVAVA--------LLDLYTKSGEISNARRIFEEMP 304
              V         ++DL  ++G +  A+     MP
Sbjct: 374 TYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMP 408



 Score = 46.6 bits (109), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 27/122 (22%), Positives = 57/122 (46%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N  ++++ +++C     L+    +H QV+K     D F +++L+++Y K   L  A +
Sbjct: 241 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQ 300

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
            FDE+ +   I++ + +  +       +A+ +F  +   G + N   F + L      G 
Sbjct: 301 AFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGL 360

Query: 173 AE 174
            E
Sbjct: 361 VE 362


>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
 gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
 gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
          Length = 694

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 247/649 (38%), Positives = 392/649 (60%), Gaps = 30/649 (4%)

Query: 186 LGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNF 229
           LG   + F+ T LI A S  G + FAR+VFD L                 N+ F++AL  
Sbjct: 47  LGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLM 106

Query: 230 FSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK 289
           +S M+     P++FTF  +LKAC GL  +++ +  H    +  ++ D++V   L+ LY K
Sbjct: 107 YSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAK 166

Query: 290 SGEISNARRIFE--EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFV 347
              + +AR +FE   +P++ ++ W+ +++ YAQ    ++A+E+F +MR+  V P+    V
Sbjct: 167 CRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALV 226

Query: 348 SVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKR 407
           SVL A   ++ L  G  IH+ VV++GL  +  +  +L  +YAKCG++  +  LF +    
Sbjct: 227 SVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSP 286

Query: 408 NHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVH 467
           N + WN MI GY + G   +A+ MF +M+ + V    ++ +S + ACA + +LE    ++
Sbjct: 287 NLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMY 346

Query: 468 CLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSA 527
               +++Y  DV +++ALIDM+AKCGS+  ARLVFD   D + V W+AMI GY +HG + 
Sbjct: 347 EYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAR 406

Query: 528 EVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSM 587
           E + ++  M++ G  PN++TF+G+L AC++ G++ +G  +F  M A++ I P  +HY  +
Sbjct: 407 EAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKINPQQQHYACV 465

Query: 588 VSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDE 647
           + LLGRAGHLD+A ++I+ +P QP V +W ALL AC  H +VE+G  +AQ +   +P + 
Sbjct: 466 IDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNT 525

Query: 648 ATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMN 696
             +V LSN+YA AR W           EK  +K+ G SW+E +G +  FR GD SH    
Sbjct: 526 GHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYE 585

Query: 697 IIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPI 756
            I   +EW+  + ++ G++ +  A L D+ ++E E  L  HSE++A+A+ L   P  +P+
Sbjct: 586 EIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPL 645

Query: 757 RIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           RI KNLR CV+CH A K+ISK+V REI++RD +RFHHF+DG CSCGD+W
Sbjct: 646 RITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 204/369 (55%), Gaps = 6/369 (1%)

Query: 262 KSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQT 321
           K  H   L    +   ++   L+   +  G+I+ AR++F+++P+  + PW+ +I  Y++ 
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97

Query: 322 DLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVS 381
           +   DA+ ++  M+ A V+P+ FTF  +L+AC+ +  L +G  +H+ V R+G  +DVFV 
Sbjct: 98  NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157

Query: 382 NALMDVYAKCGRMENSVELFA--ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ 439
           N L+ +YAKC R+ ++  +F     P+R  V+W  ++  Y Q GE  +A+ +FS+M +  
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217

Query: 440 VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR 499
           V    V   SVL A   L  L+ G  +H   VK   +++  +  +L  MYAKCG +  A+
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277

Query: 500 LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGG 559
           ++FD M   N + WNAMISGY+ +G + E + +F  M  +  RP+ ++    +SAC+  G
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337

Query: 560 LLEQGEAYFKSM-VANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRA 618
            LEQ  + ++ +  ++Y  +  I   ++++ +  + G ++  A+L+        V++W A
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFIS--SALIDMFAKCGSVE-GARLVFDRTLDRDVVVWSA 394

Query: 619 LLGACIIHN 627
           ++    +H 
Sbjct: 395 MIVGYGLHG 403


>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 886

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 274/807 (33%), Positives = 415/807 (51%), Gaps = 102/807 (12%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           ++   N+++N Y KL  L DA +LF  MP R+  S+ T + GY  S QF+ A+ +F ++ 
Sbjct: 91  NVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMR 150

Query: 150 REGHEL-NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCV 208
           + G  L N F F   +K   ++GW E+   +   + K     +  V TAL+D    CG +
Sbjct: 151 QTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAM 210

Query: 209 EFARKVFDGLFNDCF--------------------------------------------- 223
           +FA K F  + N                                                
Sbjct: 211 DFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSG 270

Query: 224 --EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
              EAL+    M   G +P++ T+   L AC  L ++   K  H   ++    +D YVA 
Sbjct: 271 RVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVAS 330

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           A+++LY K G    A+R+F  +  ++ + W+ +I  + Q     ++VELF +MR   +A 
Sbjct: 331 AMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAV 390

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS---- 397
           +QF   +++  C     + LG+Q+HSL ++ G    V VSN+L+ +YAKCG ++N+    
Sbjct: 391 DQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIF 450

Query: 398 ---------------------------VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMI 430
                                       E F +   RN +TWN M+  Y+Q G     + 
Sbjct: 451 NFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLK 510

Query: 431 MFSKML-EEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMY 489
           M+S ML E+ V    VTY ++ R CA + A + G Q+   TVK    +D  V NA+I MY
Sbjct: 511 MYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMY 570

Query: 490 AKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFV 549
           +KCG I++AR  FD ++  + VSWNAMI+GYS HG+  + +++FD +  +G +P+ +++V
Sbjct: 571 SKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYV 630

Query: 550 GVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF 609
            VLS CS+ GL+E+G+ YF  M  ++ I P +EH++ MV LLGRAGHL +A  LI+ +P 
Sbjct: 631 AVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPM 690

Query: 610 QPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-- 667
           +P+  +W ALL AC  H N ++  L+A+H+ D +      ++LL+ +YA A   + +A  
Sbjct: 691 KPTAEVWGALLSACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQV 750

Query: 668 ---------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDL 718
                     K PG SW+E    VH F+A D SH  +  IR  L+ L  K    GY+   
Sbjct: 751 RKLMRDKGIKKSPGYSWMEVNNRVHVFKAEDVSHPQVIAIREKLDELMEKIAHLGYV--- 807

Query: 719 SAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKI 778
                     E  R    HSEKLA+AF +  +P   PI I+KNLRIC DCHT IK+IS +
Sbjct: 808 --------RTESPRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICDDCHTVIKLISTV 859

Query: 779 VQREIIIRDVHRFHHFQDGCCSCGDFW 805
             RE +IRD  RFHHF+ G CSC D+W
Sbjct: 860 TDREFVIRDGVRFHHFKGGSCSCMDYW 886



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 129/505 (25%), Positives = 225/505 (44%), Gaps = 78/505 (15%)

Query: 190 SNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVL 249
           S+  +  AL DA   CG    AR    G        A    S++  VG     F    +L
Sbjct: 20  SHMAITQALADALRSCG----ARSALTG--------ARTLHSRLINVGLASVVFLQNTLL 67

Query: 250 KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
            A L    +  A++          E ++     +++ Y K G +S+A  +F  MP +DV 
Sbjct: 68  HAYLSCGALSDARN---LLRDEITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVA 124

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVA-PNQFTFVSVLQACATMEGLDLGNQIHSL 368
            W+ +++ Y Q+   ++A+++F  MRQ   + PN FTF  V+++C  +   ++  Q+  L
Sbjct: 125 SWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGL 184

Query: 369 VVRVGLLSDVFVSNALMDVYAKCGRME-------------------------------NS 397
           + +     D  V  AL+D+  +CG M+                               ++
Sbjct: 185 LSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHA 244

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
           +E+F   P+R+ V+WN +I    + G V +A+ M   M  + V     TY+S L ACA L
Sbjct: 245 LEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARL 304

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
           ++LE G Q+H   ++    +D  VA+A++++YAKCG   +A+ VF  + D N VSW  +I
Sbjct: 305 SSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLI 364

Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSN------GGLLEQ-------- 563
            G+  +G  +E +++F+ M+      +      ++S C N      G  L          
Sbjct: 365 GGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHT 424

Query: 564 ----------------GEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGI 607
                           G      ++ N+  E  I  +T M++   + G++ KA +  + +
Sbjct: 425 RAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDM 484

Query: 608 PFQPSVMIWRALLGACIIHNNVEIG 632
             + +V+ W A+LGA I H   E G
Sbjct: 485 STR-NVITWNAMLGAYIQHGAEEDG 508



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/475 (23%), Positives = 218/475 (45%), Gaps = 61/475 (12%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +S +Y +SL +C +   L+    +H QV++    +D +  + ++ +Y K     +A ++F
Sbjct: 290 DSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVF 349

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             + +RN++S+   I G+     F E+V LF+ +  E   ++ FA    +    +     
Sbjct: 350 SSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDIC 409

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMR 234
           L   + +   K GH     V  +LI  ++ CG ++ A  +F            NF +   
Sbjct: 410 LGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIF------------NFMA--- 454

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
                                                  E D+     ++  Y++ G I+
Sbjct: 455 ---------------------------------------ERDIVSWTGMITAYSQVGNIA 475

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQAC 353
            AR  F++M  ++VI W+ M+  Y Q     D ++++  M  +  V P+  T+V++ + C
Sbjct: 476 KAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGC 535

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
           A +    LG+QI    V+VGL+ D  V NA++ +Y+KCGR+  + + F    +++ V+WN
Sbjct: 536 ADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWN 595

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
            MI GY Q G   +A+ +F  +L +      ++Y +VL  C+    +E G + +   +K 
Sbjct: 596 AMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEG-KFYFDMMKR 654

Query: 474 NYDMDVVVAN--ALIDMYAKCGSITDARLVFDM--MNDWNEVSWNAMISGYSMHG 524
           ++++   + +   ++D+  + G + +A+ + D   M    EV W A++S    HG
Sbjct: 655 DHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEV-WGALLSACKTHG 708


>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
          Length = 694

 Score =  493 bits (1270), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 246/649 (37%), Positives = 393/649 (60%), Gaps = 30/649 (4%)

Query: 186 LGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNF 229
           LG   + F+ T LI A S  G + FAR+VFD L                 N+ F++AL  
Sbjct: 47  LGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLM 106

Query: 230 FSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK 289
           +S M+     P++FTF  +LKAC GL  +++ +  H    +  ++ D++V   L+ LY K
Sbjct: 107 YSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAK 166

Query: 290 SGEISNARRIFE--EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFV 347
              + +AR +FE   +P++ ++ W+ +++ YAQ    ++A+E+F  MR+  V P+    V
Sbjct: 167 CRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALV 226

Query: 348 SVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKR 407
           SVL A   ++ L  G  IH+ VV++GL  +  +  +L  +YAKCG++  +  LF +    
Sbjct: 227 SVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSP 286

Query: 408 NHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVH 467
           N + WN MI GY + G   +A+ MF +M+ + V    ++ +S + ACA + +LE    ++
Sbjct: 287 NLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMY 346

Query: 468 CLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSA 527
               +++Y  DV +++ALIDM+AKCGS+  ARLVFD   D + V W+AMI GY +HG + 
Sbjct: 347 EYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAR 406

Query: 528 EVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSM 587
           E + ++  M++ G  PN++TF+G+L AC++ G++ +G  +F +++A++ I P  +HY  +
Sbjct: 407 EAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFF-NLMADHKINPQQQHYACV 465

Query: 588 VSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDE 647
           + LLGRAGHLD+A ++I+ +P QP V +W ALL AC  H +VE+G  +AQ +   +P + 
Sbjct: 466 IDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNT 525

Query: 648 ATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMN 696
             +V LSN+YA AR W           EK  +K+ G SW+E +G +  FR GD SH    
Sbjct: 526 GHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYE 585

Query: 697 IIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPI 756
            I   +EW+  + ++ G++ +  A L D+ ++E E  L  HSE++A+A+ L   P  +P+
Sbjct: 586 EIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPL 645

Query: 757 RIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           RI KNLR CV+CH A K+ISK+V REI++RD +RFHHF+DG CSCGD+W
Sbjct: 646 RITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 203/369 (55%), Gaps = 6/369 (1%)

Query: 262 KSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQT 321
           K  H   L    +   ++   L+   +  G+I+ AR++F+++P+  + PW+ +I  Y++ 
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97

Query: 322 DLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVS 381
           +   DA+ ++  M+ A V+P+ FTF  +L+AC+ +  L +G  +H+ V R+G  +DVFV 
Sbjct: 98  NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157

Query: 382 NALMDVYAKCGRMENSVELFA--ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ 439
           N L+ +YAKC R+ ++  +F     P+R  V+W  ++  Y Q GE  +A+ +FS M +  
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMD 217

Query: 440 VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR 499
           V    V   SVL A   L  L+ G  +H   VK   +++  +  +L  MYAKCG +  A+
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277

Query: 500 LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGG 559
           ++FD M   N + WNAMISGY+ +G + E + +F  M  +  RP+ ++    +SAC+  G
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337

Query: 560 LLEQGEAYFKSM-VANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRA 618
            LEQ  + ++ +  ++Y  +  I   ++++ +  + G ++  A+L+        V++W A
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFIS--SALIDMFAKCGSVE-GARLVFDRTLDRDVVVWSA 394

Query: 619 LLGACIIHN 627
           ++    +H 
Sbjct: 395 MIVGYGLHG 403


>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
 gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
          Length = 736

 Score =  493 bits (1270), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 271/738 (36%), Positives = 405/738 (54%), Gaps = 34/738 (4%)

Query: 100 VYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFA 159
           +Y K   + DA  +F  +   N++S+   +  +  +  + EA+G +  +  EG   +   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 160 FTAFLKVLVS---MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD 216
           F   + V  S   +   +L   +      L  D    +GTALI  ++ C  +E ARK FD
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFD--IILGTALITMYARCRDLELARKTFD 118

Query: 217 GL----------------FNDCFEEALNFFSQMRAV---GFKPNNFTFAFVLKACLGLDT 257
            +                 N     AL  +  M +    G KP+  TF+  L AC  +  
Sbjct: 119 EMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGD 178

Query: 258 IRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIAR 317
           I   +      + + Y  D  V  AL+++Y+K G + +AR++F+ +  +DVI W+ MI+ 
Sbjct: 179 ISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISG 238

Query: 318 YAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD 377
           YA+   +  A+ELF RM      PN  TF+ +L AC  +E L+ G  IH  V   G  SD
Sbjct: 239 YAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESD 298

Query: 378 VFVSNALMDVYAKCGR-MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML 436
           + + N L+++Y KC   +E + ++F     R+ +TWN +IV YVQ G+   A+ +F +M 
Sbjct: 299 LVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQ 358

Query: 437 EEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSIT 496
            E V   E+T S+VL ACA L A   G  VH L        DVV+ N+L++MY +CGS+ 
Sbjct: 359 LENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLD 418

Query: 497 DARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS 556
           D   VF  + D + VSW+ +I+ Y+ HG S   L+ F  + Q G   +++T V  LSACS
Sbjct: 419 DTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACS 478

Query: 557 NGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIW 616
           +GG+L++G   F SMV ++G+ P   H+  MV LL RAG L+ A  LI  +PF P  + W
Sbjct: 479 HGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAW 538

Query: 617 RALLGACIIHNNVEIGRLSAQHILDFEPEDE-ATHVLLSNIYAMARSWE--------KAA 667
            +LL  C +HN+ +     A  + + E EDE +T  LLSN+YA A  W+        +AA
Sbjct: 539 TSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTRNRRAA 598

Query: 668 SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVRE 727
            K PG S+IE    VH F AGD SH +  +I   ++ L+ + + AGY+PD+  VL +V+E
Sbjct: 599 RKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNVKE 658

Query: 728 DEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRD 787
           +EKE+ L  HSEKLA+A+ L   PP +P+ I+KNLR CVDCH A K IS+IV R+I++RD
Sbjct: 659 EEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVRD 718

Query: 788 VHRFHHFQDGCCSCGDFW 805
             RFHHF++G CSC D+W
Sbjct: 719 STRFHHFENGSCSCKDYW 736



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 142/500 (28%), Positives = 251/500 (50%), Gaps = 25/500 (5%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNC-LDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +  ++  C  + DL+    +H  +L+      D+     L+ +Y +   L  A K FDEM
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTL---HREGHELNPFAFTAFLKVLVSMGWAE 174
            ++  +++   I GY+ +     A+ ++  +     EG + +   F++ L     +G   
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN-------------- 220
               + A     G+ S++ V  ALI+ +S CG +E ARKVFD L N              
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240

Query: 221 --DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                 +AL  F +M     KPN  TF  +L AC  L+ +   ++ H    +  YE DL 
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLV 300

Query: 279 VAVALLDLYTK-SGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
           +   LL++YTK S  +  AR++FE M  +DVI W+ +I  Y Q   + DA+++F +M+  
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLE 360

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            VAPN+ T  +VL ACA +     G  +H+L+      +DV + N+LM++Y +CG ++++
Sbjct: 361 NVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDT 420

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
           V +FA    ++ V+W+T+I  Y Q G     +  F ++L+E + A +VT  S L AC+  
Sbjct: 421 VGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHG 480

Query: 458 AALEPGMQVHCLTVKANYDM--DVVVANALIDMYAKCGSITDAR-LVFDMMNDWNEVSWN 514
             L+ G+Q   L++  ++ +  D      ++D+ ++ G +  A  L+ DM    + V+W 
Sbjct: 481 GMLKEGVQTF-LSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWT 539

Query: 515 AMISGYSMHGLSAEVLKVFD 534
           +++SG  +H  +    +V D
Sbjct: 540 SLLSGCKLHNDTKRAARVAD 559



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 180/399 (45%), Gaps = 19/399 (4%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +++++L +C    D+     I  + +  G   D    N L+N+Y K   L  A K+FD +
Sbjct: 165 TFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRL 224

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
             R+ I++ T I GY       +A+ LF  +     + N   F   L    ++   E   
Sbjct: 225 KNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGR 284

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVC-GCVEFARKVFDGL-FNDCF------------ 223
            +   V + G++S+  +G  L++ ++ C   +E AR+VF+ +   D              
Sbjct: 285 AIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQY 344

Query: 224 ---EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
              ++AL+ F QM+     PN  T + VL AC  L   R  K+ H        + D+ + 
Sbjct: 345 GQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLE 404

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
            +L+++Y + G + +   +F  +  K ++ WS +IA YAQ   S   +E F  + Q  +A
Sbjct: 405 NSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLA 464

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIH-SLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
            +  T VS L AC+    L  G Q   S+V   GL  D      ++D+ ++ GR+E +  
Sbjct: 465 ADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAEN 524

Query: 400 LFAESP-KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
           L  + P   + V W +++ G     +  +A  +  K+ E
Sbjct: 525 LIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFE 563


>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score =  493 bits (1270), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 277/762 (36%), Positives = 421/762 (55%), Gaps = 36/762 (4%)

Query: 75  AMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTV 134
           A  +H  ++  G     F +  L+N+Y  L  +  +   FD++  ++  ++ + I  Y  
Sbjct: 92  AKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVR 151

Query: 135 SSQFVEAVGLF-STLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAF 193
           +  F EA+  F   L     + + + F   LK   ++       C    V+KLG   + F
Sbjct: 152 NGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVDGRKIHC---WVFKLGFQWDVF 208

Query: 194 VGTALIDAFSVCGCVEFARKVFD---------------GLF-NDCFEEALNFFSQMRAVG 237
           V  +LI  +S  G V  AR +FD               GL  N    +AL+   +MR  G
Sbjct: 209 VAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 268

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR 297
              ++ T A +L  C  L  I  A   H   +K   E +L+V+ AL+++Y K G + +A+
Sbjct: 269 INMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQ 328

Query: 298 RIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATME 357
           ++F++M  +DV+ W+ +IA Y Q D  + A   F +M+   + P+  T VS+    A   
Sbjct: 329 KVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSR 388

Query: 358 GLDLGNQIHSLVVRVG-LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMI 416
                  +H  ++R G L+  V + NA+MD+YAK G ++++ ++F   P ++ V+WNT+I
Sbjct: 389 DYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLI 448

Query: 417 VGYVQLGEVGKAMIMFSKMLEE--QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
            GY Q G   +A+ ++ +M+EE  ++   + T+ S+L A A + AL+ GM++H   +K N
Sbjct: 449 SGYTQNGLASEAIEVY-RMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTN 507

Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
             +DV V   LID+Y KCG + DA  +F  +   + V WNA+IS + +HG   + LK+F 
Sbjct: 508 LHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFR 567

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
            MQ  G +P+++TF+ +LSACS+ GL+++G+ +F  M   YGI+P ++HY  MV LLGRA
Sbjct: 568 EMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLM-QEYGIKPSLKHYGCMVDLLGRA 626

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLS 654
           G L+ A   I+ +P  P   IW ALLGAC IH N+E+G+ ++  + + + E+   +VLLS
Sbjct: 627 GFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLS 686

Query: 655 NIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLE 703
           NIYA    WE           +   K PG S IE    V  F  G+ SH     I   L 
Sbjct: 687 NIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYTGNQSHPKCKEIYAELR 746

Query: 704 WLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLR 763
            L  K +  GYIPD S VL+DV EDEKE  L  HSE+LA+AF +   PP S IRI KNLR
Sbjct: 747 ILTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSAIRIFKNLR 806

Query: 764 ICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +C DCH A K IS+I +REI++RD  RFHHF++G CSCGD+W
Sbjct: 807 VCGDCHNATKFISRITEREIVVRDSKRFHHFKNGICSCGDYW 848



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 186/366 (50%), Gaps = 9/366 (2%)

Query: 260 VAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYA 319
           +AK  H   + +      ++++ L++LY   G++S +R  F+++ +KDV  W+ MI+ Y 
Sbjct: 91  LAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYV 150

Query: 320 QTDLSIDAVELFCRMRQAFVAPNQ---FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLS 376
           +     +A++ F ++    V   Q   +TF  VL+AC T+     G +IH  V ++G   
Sbjct: 151 RNGHFREAIDCFYQL--LLVTKFQADFYTFPPVLKACQTLVD---GRKIHCWVFKLGFQW 205

Query: 377 DVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML 436
           DVFV+ +L+ +Y++ G +  +  LF + P R+  +WN MI G +Q G   +A+ +  +M 
Sbjct: 206 DVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMR 265

Query: 437 EEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSIT 496
            E +    VT +S+L  CA L  +     +H   +K   + ++ V+NALI+MYAK G++ 
Sbjct: 266 LEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLG 325

Query: 497 DARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS 556
           DA+ VF  M   + VSWN++I+ Y  +         F  MQ  G  P+ LT V + S  +
Sbjct: 326 DAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAA 385

Query: 557 NGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIW 616
                +   +    ++    +   +    +++ +  + G +D A K+   IP +  V+ W
Sbjct: 386 QSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVK-DVVSW 444

Query: 617 RALLGA 622
             L+  
Sbjct: 445 NTLISG 450



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 100/394 (25%), Positives = 179/394 (45%), Gaps = 24/394 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +S + A+ L  C Q  D+ TA  IH  V+K G   +LF +N L+N+Y K   L DA K+F
Sbjct: 272 DSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVF 331

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
            +M  R+ +S+ + I  Y  +   V A G F  +   G E +     +   +       +
Sbjct: 332 QQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYK 391

Query: 175 LCPCVFACVYKLGHDSNAFV-GTALIDAFSVCGCVEFARKVFDGL--------------- 218
               V   + + G    A V G A++D ++  G ++ A KVF+ +               
Sbjct: 392 NSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGY 451

Query: 219 -FNDCFEEALNFFSQMRAV-GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
             N    EA+  +  M      K N  T+  +L A   +  ++     HG  +KT   +D
Sbjct: 452 TQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLD 511

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           ++V   L+DLY K G + +A  +F ++P++  +PW+ +I+ +        A++LF  M+ 
Sbjct: 512 VFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQD 571

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             V P+  TF+S+L AC+    +D G     L+   G+   +     ++D+  + G +E 
Sbjct: 572 EGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQEYGIKPSLKHYGCMVDLLGRAGFLEM 631

Query: 397 SVELFAESPKRNHVT-WNTM-----IVGYVQLGE 424
           + +   + P     + W  +     I G ++LG+
Sbjct: 632 AYDFIKDMPLHPDASIWGALLGACRIHGNIELGK 665



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 181/370 (48%), Gaps = 23/370 (6%)

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           +  F S+  +C       L  ++H+L+V  G +   F+S  L+++YA  G +  S   F 
Sbjct: 76  EIDFNSLFDSCTKTL---LAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFD 132

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSK-MLEEQVPATEVTYSSVLRACASLAALE 461
           +  +++  TWN+MI  YV+ G   +A+  F + +L  +  A   T+  VL+AC +L    
Sbjct: 133 QIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLV--- 189

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
            G ++HC   K  +  DV VA +LI MY++ G +  AR +FD M   +  SWNAMISG  
Sbjct: 190 DGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLI 249

Query: 522 MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
            +G +A+ L V D M+  G   +++T   +L  C+  G +          V  +G+E  +
Sbjct: 250 QNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTA-TLIHLYVIKHGLEFEL 308

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGR--LSAQHI 639
               +++++  + G+L  A K+ + + F   V+ W +++ A   +++    R       +
Sbjct: 309 FVSNALINMYAKFGNLGDAQKVFQQM-FLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQL 367

Query: 640 LDFEPEDEATHVLLSNIYAMARSWEKAASKEPGL---SW------IENQGMVHYFRAG-- 688
              EP D  T V L++I A +R ++ + S    +    W      I N  M  Y + G  
Sbjct: 368 NGLEP-DLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVI 426

Query: 689 DTSHADMNII 698
           D++H   N+I
Sbjct: 427 DSAHKVFNLI 436



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/159 (22%), Positives = 68/159 (42%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           + N  ++ + L +      LQ  M IH  ++K    LD+F    L+++Y K  RL DA  
Sbjct: 474 KLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMC 533

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           LF ++P  +++ +   I  + +     +A+ LF  +  EG + +   F + L      G 
Sbjct: 534 LFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGL 593

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFA 211
            +     F  + + G   +      ++D     G +E A
Sbjct: 594 VDEGKWFFHLMQEYGIKPSLKHYGCMVDLLGRAGFLEMA 632


>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
           [Vitis vinifera]
          Length = 781

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 285/755 (37%), Positives = 418/755 (55%), Gaps = 31/755 (4%)

Query: 79  HCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQF 138
           H Q++  G   DL     L +    L  +  A+ LF  +P  +   +   I+ +++++  
Sbjct: 30  HAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPDLFLYNVLIRAFSLNNSP 89

Query: 139 VEAVGLFSTLHREGHELNPFAFT-AFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
             AV L++ L R+   L P  FT AF+    S     L     + V   G  S+ FVG+A
Sbjct: 90  SSAVSLYTHL-RKSTPLEPDNFTYAFVISGASSLGLGLLLHAHSIVAGFG--SDLFVGSA 146

Query: 198 LIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRAVGFKPN 241
           ++  +     V  ARKVFDG+                 N CF+EA+  F  M   G   +
Sbjct: 147 IVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIGFD 206

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
           + T A VL     L  + +       A+K  +    YV   L  LY+K GEI  AR +F 
Sbjct: 207 STTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLLFG 266

Query: 302 EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL 361
           ++ + D++ ++ MI+ Y   + +  +V LF  +  +    N  + V ++        L L
Sbjct: 267 QIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHL 326

Query: 362 GNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQ 421
              IH    + G++S+  VS AL  VY++   +E++  LF ES +++  +WN MI GY Q
Sbjct: 327 TRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQ 386

Query: 422 LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVV 481
            G   KA+ +F +M + +V    VT +S+L ACA L AL  G  VH L  + +++ ++ V
Sbjct: 387 NGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFV 446

Query: 482 ANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW 541
           + ALIDMYAKCGSIT+A+ +F MM + N V+WNAMISGY +HG   E L +F+ M     
Sbjct: 447 STALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRV 506

Query: 542 RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAA 601
            P  +TF+ VL ACS+ GL+ +G+  F+SMV ++G EP  EHY  MV LLGRAG+LDKA 
Sbjct: 507 SPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKAL 566

Query: 602 KLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMAR 661
             I  +P +P   +W ALLGAC+IH +  + RL++  + + +P++   +VLLSNIY+  +
Sbjct: 567 DFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNVGYYVLLSNIYSAGQ 626

Query: 662 SWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSR 710
           ++ +AAS           K PG + IE    +H F +GD SH     I  MLE L  K R
Sbjct: 627 NYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQATAIYAMLEKLTGKMR 686

Query: 711 KAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHT 770
           +AG+  +    L DV E+EKE  + VHSEKLA+AF L    P + IRIIKNLR+C+DCH 
Sbjct: 687 EAGFQTETGTALHDVEEEEKELMVKVHSEKLAIAFGLITSEPGTEIRIIKNLRVCLDCHN 746

Query: 771 AIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           A K ISKI +R I++RD +RFHHF+DG CSCGD+W
Sbjct: 747 ATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 781



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 171/369 (46%), Gaps = 17/369 (4%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
           F+S + A  L    +  DL   M I C  +K G     +    L  +Y K   +  A  L
Sbjct: 205 FDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLL 264

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           F ++ + + +S+   I GYT +++   +V LF  L   G ++N  +    + V    G  
Sbjct: 265 FGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHL 324

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG---------------- 217
            L  C+     K G  SN+ V TAL   +S    +E AR +FD                 
Sbjct: 325 HLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGY 384

Query: 218 LFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
             N   E+A++ F +M+    +PN  T   +L AC  L  + + K  H    +  +E ++
Sbjct: 385 AQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNI 444

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
           +V+ AL+D+Y K G I+ A+R+F  MP+K+ + W+ MI+ Y       +A+ LF  M  +
Sbjct: 445 FVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHS 504

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQI-HSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
            V+P   TF+SVL AC+    +  G++I  S+V   G          ++D+  + G ++ 
Sbjct: 505 RVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDK 564

Query: 397 SVELFAESP 405
           +++   + P
Sbjct: 565 ALDFIRKMP 573



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 124/319 (38%), Gaps = 36/319 (11%)

Query: 28  LSAQAALSTQQCSNSTTTPITF------SVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQ 81
           +S  A +S   C+N T + +        S  + NS S    +        L     IH  
Sbjct: 274 VSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGF 333

Query: 82  VLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEA 141
             K G   +   +  L  VY +LN +  A  LFDE  E++  S+   I GY  +    +A
Sbjct: 334 CTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKA 393

Query: 142 VGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDA 201
           + LF  + +     NP   T+ L     +G   L   V   + +   +SN FV TALID 
Sbjct: 394 ISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDM 453

Query: 202 FSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTF 245
           ++ CG +  A+++F  +                 +    EALN F++M      P   TF
Sbjct: 454 YAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTF 513

Query: 246 AFVLKACL-------GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
             VL AC        G +  R     HG      +E        ++DL  ++G +  A  
Sbjct: 514 LSVLYACSHAGLVREGDEIFRSMVHDHG------FEPLPEHYACMVDLLGRAGNLDKALD 567

Query: 299 IFEEMPKKDVIP-WSFMIA 316
              +MP +   P W  ++ 
Sbjct: 568 FIRKMPVEPGPPVWGALLG 586



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 64/294 (21%), Positives = 128/294 (43%), Gaps = 11/294 (3%)

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           +A  +  F++++   +T+  L   NQ H+ ++  GL +D+     L    +    ++ + 
Sbjct: 6   IASTRNLFLTLINRVSTLHQL---NQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQAS 62

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVP--ATEVTYSSVLRACAS 456
            LF+  P  +   +N +I  +        A+ +++  L +  P      TY+ V+   +S
Sbjct: 63  LLFSTIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTH-LRKSTPLEPDNFTYAFVISGASS 121

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           L      + +H  ++ A +  D+ V +A++  Y K   +  AR VFD M + + V WN M
Sbjct: 122 LGLG---LLLHAHSIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTM 178

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           +SG   +    E + +F  M + G   ++ T   VL   +    L  G    + +    G
Sbjct: 179 VSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMG-IQCLAMKVG 237

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
                   T +  L  + G ++  A+L+ G   QP ++ + A++     +N  E
Sbjct: 238 FHSHAYVITGLACLYSKCGEIE-TARLLFGQIGQPDLVSYNAMISGYTCNNETE 290


>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Vitis vinifera]
          Length = 1058

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 281/820 (34%), Positives = 443/820 (54%), Gaps = 83/820 (10%)

Query: 50   SVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD 109
            S++E N  S+   +   +QN DL+ A  +  ++ +K    ++ + N ++  Y    R+ +
Sbjct: 258  SMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEK----NVASWNSVVTGYCHCYRMSE 313

Query: 110  ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
            A +LFD+MPERN++S++  I GY   S + EA  +F  + R     +   F   L  +  
Sbjct: 314  ARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITG 373

Query: 170  MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------- 218
            +   EL   +     K G++ +  VG+A+++A++  G ++ A   F+ +           
Sbjct: 374  LDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTM 433

Query: 219  ---FNDC--FEEALNFFSQM--RAVGFKPNNFT----FAFVLKACLGLDTIRVAKSAHGC 267
               F  C   ++A+  + ++  + V  K    T       + KA L  D I         
Sbjct: 434  IAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQKARLIFDEI--------- 484

Query: 268  ALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDA 327
                    ++    A++  YT++G +  A+ +F++MP K+   W+ MIA + Q + S +A
Sbjct: 485  -----LNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREA 539

Query: 328  VELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDV 387
            +EL   + ++   P+  +F S L ACA +  +++G  IHSL ++ G   + +V N L+ +
Sbjct: 540  LELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISM 599

Query: 388  YAKCGRMENSVELF-------------------------------AESPKRNHVTWNTMI 416
            YAKCG +E+   +F                                + PKR+ V+W  +I
Sbjct: 600  YAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAII 659

Query: 417  VGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD 476
              YVQ G    A+ +F  ML   +   ++T +S+L AC +L A++ G Q H L  K  +D
Sbjct: 660  SAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFD 719

Query: 477  MDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLM 536
              + V N+LI MY KCG   D   VF+ M + + ++WNA++ G + +GL  E +K+F+ M
Sbjct: 720  TFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQM 778

Query: 537  QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGH 596
            +  G  P+ ++F+GVL ACS+ GL+++G A+F SM   YGI P + HYT MV LLGRAG+
Sbjct: 779  EVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGY 838

Query: 597  LDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNI 656
            L +A  LIE +P +P  +IW ALLGAC IH NVE+G+  A+ +        AT+VLLSN+
Sbjct: 839  LSEAEALIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNL 898

Query: 657  YAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWL 705
            +A    W+K A           +KEPG+SWI+ +  +H F  GD +H  +  I   L+  
Sbjct: 899  FASQGMWDKVAEIRKLMKDQGLTKEPGISWIQVKNKLHCFVTGDRTHDQIEEIYSALKEY 958

Query: 706  NMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRIC 765
                R  GY+PD + VL DV E++K+  L  HSEKLA+ F +   P  SPI+IIKNLRIC
Sbjct: 959  YGCFRATGYMPDTNFVLHDVEEEQKQNELLYHSEKLAVVFGILSTPNGSPIQIIKNLRIC 1018

Query: 766  VDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
             DCHT +K +SK+  R+IIIRD +RFHHF+DG CSCGD+W
Sbjct: 1019 GDCHTFMKFMSKVTLRKIIIRDGNRFHHFRDGSCSCGDYW 1058



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 165/612 (26%), Positives = 275/612 (44%), Gaps = 99/612 (16%)

Query: 91  LFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHR 150
           LF  N  +    +L R+ +A ++F+EM +R+ +S+ + I GY+ + +  EA  LF     
Sbjct: 171 LFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVG 230

Query: 151 EGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEF 210
           +    N   +T  L      G  E    VF  +     + N     A+I  +   G ++ 
Sbjct: 231 K----NIRTWTILLTGYAKEGRIEEAREVFESMT----ERNVVSWNAMISGYVQNGDLKN 282

Query: 211 ARKVFDGL--------------FNDCFE--EALNFFSQM--------------------- 233
           ARK+FD +              +  C+   EA   F QM                     
Sbjct: 283 ARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDY 342

Query: 234 -----------RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
                      R V  +P+   F  VL A  GLD + +  S    A+KT YE D+ V  A
Sbjct: 343 WEAWDVFVKMCRTVA-RPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSA 401

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           +L+ YT++G +  A   FE MP+++   W+ MIA +AQ     DA++L+ R+ +  VA  
Sbjct: 402 ILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVA-- 459

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
             T  +++ A A +  +    Q   L+    L  +V   NA++  Y + G ++ + +LF 
Sbjct: 460 --TKTAMMTAYAQVGRI----QKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQ 513

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
           + P +N  +W  MI G+VQ  E  +A+ +  ++       ++ +++S L ACA++  +E 
Sbjct: 514 KMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEI 573

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSIT-------------------------- 496
           G  +H L +K     +  V N LI MYAKCG++                           
Sbjct: 574 GRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSE 633

Query: 497 -----DARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGV 551
                DAR+VF+ M   + VSW A+IS Y   G     L +F  M  RG +PN LT   +
Sbjct: 634 NYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSL 693

Query: 552 LSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQP 611
           LSAC N G ++ GE  F +++   G +  +    S++++  + G+ D    + E +P + 
Sbjct: 694 LSACGNLGAIKLGEQ-FHALIFKLGFDTFLFVGNSLITMYFKCGYEDGFC-VFEEMP-EH 750

Query: 612 SVMIWRALLGAC 623
            ++ W A+L  C
Sbjct: 751 DLITWNAVLVGC 762


>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
 gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
          Length = 736

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 271/738 (36%), Positives = 405/738 (54%), Gaps = 34/738 (4%)

Query: 100 VYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFA 159
           +Y K   + DA  +F  +   N++S+   +  +  +  + EA+G +  +  EG   +   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 160 FTAFLKVLVS---MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD 216
           F   + V  S   +   +L   +      L  D    +GTALI  ++ C  +E ARK FD
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFD--IILGTALITMYARCRDLELARKTFD 118

Query: 217 GL----------------FNDCFEEALNFFSQMRAV---GFKPNNFTFAFVLKACLGLDT 257
            +                 N     AL  +  M +    G KP+  TF+  L AC  +  
Sbjct: 119 EMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGD 178

Query: 258 IRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIAR 317
           I   +      + + Y  D  V  AL+++Y+K G + +AR++F+ +  +DVI W+ MI+ 
Sbjct: 179 ISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISG 238

Query: 318 YAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD 377
           YA+   +  A+ELF RM      PN  TF+ +L AC  +E L+ G  IH  V   G  SD
Sbjct: 239 YAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESD 298

Query: 378 VFVSNALMDVYAKCGR-MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML 436
           + + N L+++Y KC   +E + ++F     R+ +TWN +IV YVQ G+   A+ +F +M 
Sbjct: 299 LVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQ 358

Query: 437 EEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSIT 496
            E V   E+T S+VL ACA L A   G  VH L        DVV+ N+L++MY +CGS+ 
Sbjct: 359 LENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLD 418

Query: 497 DARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS 556
           D   VF  + D + VSW+ +I+ Y+ HG S   L+ F  + Q G   +++T V  LSACS
Sbjct: 419 DTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACS 478

Query: 557 NGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIW 616
           +GG+L++G   F SMV ++G+ P   H+  MV LL RAG L+ A  LI  +PF P  + W
Sbjct: 479 HGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAW 538

Query: 617 RALLGACIIHNNVEIGRLSAQHILDFEPEDE-ATHVLLSNIYAMARSWE--------KAA 667
            +LL  C +HN+ +     A  + + E EDE +T  LLSN+YA A  W+        +AA
Sbjct: 539 TSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTRNRRAA 598

Query: 668 SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVRE 727
            K PG S+IE    VH F AGD SH +  +I   ++ L+ + + AGY+PD+  VL +V+E
Sbjct: 599 RKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNVKE 658

Query: 728 DEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRD 787
           +EKE+ L  HSEKLA+A+ L   PP +P+ I+KNLR CVDCH A K IS+IV R+I++RD
Sbjct: 659 EEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVRD 718

Query: 788 VHRFHHFQDGCCSCGDFW 805
             RFHHF++G CSC D+W
Sbjct: 719 STRFHHFENGSCSCKDYW 736



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 141/500 (28%), Positives = 251/500 (50%), Gaps = 25/500 (5%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNC-LDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +  ++  C  + DL+    +H  +L+      D+     L+ +Y +   L  A K FDEM
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTL---HREGHELNPFAFTAFLKVLVSMGWAE 174
            ++  +++   I GY+ +     A+ ++  +     EG + +   F++ L     +G   
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN-------------- 220
               + A     G+ S++ V  ALI+ +S CG +E ARKVFD L N              
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240

Query: 221 --DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                 +AL  F +M     KPN  TF  +L AC  L+ +   ++ H    +  YE DL 
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLV 300

Query: 279 VAVALLDLYTK-SGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
           +   LL++YTK S  +  AR++FE +  +DVI W+ +I  Y Q   + DA+++F +M+  
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLE 360

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            VAPN+ T  +VL ACA +     G  +H+L+      +DV + N+LM++Y +CG ++++
Sbjct: 361 NVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDT 420

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
           V +FA    ++ V+W+T+I  Y Q G     +  F ++L+E + A +VT  S L AC+  
Sbjct: 421 VGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHG 480

Query: 458 AALEPGMQVHCLTVKANYDM--DVVVANALIDMYAKCGSITDAR-LVFDMMNDWNEVSWN 514
             L+ G+Q   L++  ++ +  D      ++D+ ++ G +  A  L+ DM    + V+W 
Sbjct: 481 GMLKEGVQSF-LSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWT 539

Query: 515 AMISGYSMHGLSAEVLKVFD 534
           +++SG  +H  +    +V D
Sbjct: 540 SLLSGCKLHNDTKRAARVAD 559



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 102/399 (25%), Positives = 180/399 (45%), Gaps = 19/399 (4%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +++++L +C    D+     I  + +  G   D    N L+N+Y K   L  A K+FD +
Sbjct: 165 TFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRL 224

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
             R+ I++ T I GY       +A+ LF  +     + N   F   L    ++   E   
Sbjct: 225 KNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGR 284

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVC-GCVEFARKVFDGL-FNDCF------------ 223
            +   V + G++S+  +G  L++ ++ C   +E AR+VF+ L   D              
Sbjct: 285 AIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQY 344

Query: 224 ---EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
              ++AL+ F QM+     PN  T + VL AC  L   R  K+ H        + D+ + 
Sbjct: 345 GQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLE 404

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
            +L+++Y + G + +   +F  +  K ++ WS +IA YAQ   S   +E F  + Q  +A
Sbjct: 405 NSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLA 464

Query: 341 PNQFTFVSVLQACATMEGLDLGNQ-IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
            +  T VS L AC+    L  G Q   S+V   GL  D      ++D+ ++ GR+E +  
Sbjct: 465 ADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAEN 524

Query: 400 LFAESP-KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
           L  + P   + V W +++ G     +  +A  +  K+ E
Sbjct: 525 LIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFE 563


>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Vitis vinifera]
          Length = 889

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 275/814 (33%), Positives = 435/814 (53%), Gaps = 38/814 (4%)

Query: 22  NAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQ 81
           N+ +R L+     S      S T  I     + +++++ + + +C    D + A +IH +
Sbjct: 84  NSIIRALTHNGLFSEALSLYSETQRIRL---QPDTYTFPSVINACAGLLDFEMAKSIHDR 140

Query: 82  VLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEA 141
           VL  G   DL+  N L+++Y + N L  A K+F+EMP R+ +S+ + I GY  +  + EA
Sbjct: 141 VLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEA 200

Query: 142 VGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDA 201
           + ++      G   + +  ++ L+    +G  E    +   + K+G   +  V   L+  
Sbjct: 201 LEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSM 260

Query: 202 FSVCGCVEFARKVFDGL-FNDC---------------FEEALNFFSQMRAVGFKPNNFTF 245
           +     +   R++FD +   D                +EE++  F +M    FKP+  T 
Sbjct: 261 YCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEM-VNQFKPDLLTI 319

Query: 246 AFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPK 305
             +L+AC  L  +   K  H   + + YE D   +  L+++Y K G +  ++ +F  M  
Sbjct: 320 TSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKC 379

Query: 306 KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
           KD + W+ MI  Y Q     +A++LF +M +  V P+  T+V +L     +  L LG ++
Sbjct: 380 KDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKEL 438

Query: 366 HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEV 425
           H  + ++G  S++ VSN L+D+YAKCG M +S+++F     R+ +TWNT+I   V   + 
Sbjct: 439 HCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDC 498

Query: 426 GKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANAL 485
              + M S+M  E V     T  S+L  C+ LAA   G ++H    K   + DV V N L
Sbjct: 499 NLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVL 558

Query: 486 IDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNN 545
           I+MY+KCGS+ ++  VF +M   + V+W A+IS   M+G   + ++ F  M+  G  P++
Sbjct: 559 IEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDH 618

Query: 546 LTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
           + FV ++ ACS+ GL+E+G  YF  M  +Y IEP IEHY  +V LL R+  LDKA   I 
Sbjct: 619 VAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFIL 678

Query: 606 GIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEK 665
            +P +P   IW ALL AC +  + EI    ++ I++  P+D   +VL+SNIYA    W++
Sbjct: 679 SMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQ 738

Query: 666 AAS-----------KEPGLSWIENQGMVHYFRAGDT---SHADMNIIRGMLEWLNMKSRK 711
             S           K+PG SW+E Q  V+ F  G        ++N + GML  L  K   
Sbjct: 739 VRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKE-- 796

Query: 712 AGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTA 771
            GYI +L  VL D+ EDEK   L  HSE+LA+AF L    P +P++++KNLR+C DCHT 
Sbjct: 797 -GYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTV 855

Query: 772 IKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            K ISKIVQRE+++RD +RFH F+DG CSCGD+W
Sbjct: 856 TKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 889



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 150/523 (28%), Positives = 262/523 (50%), Gaps = 22/523 (4%)

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
           P  N   + + I+  T +  F EA+ L+S   R   + + + F + +     +   E+  
Sbjct: 76  PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 135

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FND 221
            +   V  +G  S+ ++G ALID +     ++ ARKVF+ +                 N 
Sbjct: 136 SIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG 195

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
            + EAL  + + R +G  P+++T + VL+AC GL ++      HG   K   + D+ V  
Sbjct: 196 YWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNN 255

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
            LL +Y K   + + RRIF++M  +D + W+ MI  Y+Q  L  ++++LF  M   F  P
Sbjct: 256 GLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQF-KP 314

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           +  T  S+LQAC  +  L+ G  +H  ++  G   D   SN L+++YAKCG +  S E+F
Sbjct: 315 DLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVF 374

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
           +    ++ V+WN+MI  Y+Q G   +AM +F KM++  V    VTY  +L     L  L 
Sbjct: 375 SGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLH 433

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
            G ++HC   K  ++ ++VV+N L+DMYAKCG + D+  VF+ M   + ++WN +I+   
Sbjct: 434 LGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIAS-C 492

Query: 522 MHGLSAEV-LKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPC 580
           +H     + L++   M+  G  P+  T + +L  CS      QG+      +   G+E  
Sbjct: 493 VHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKE-IHGCIFKLGLESD 551

Query: 581 IEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGAC 623
           +     ++ +  + G L  + ++ + +  +  V+ W AL+ AC
Sbjct: 552 VPVGNVLIEMYSKCGSLRNSFQVFKLMKTK-DVVTWTALISAC 593



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 185/351 (52%), Gaps = 5/351 (1%)

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
           P  +V  W+ +I       L  +A+ L+   ++  + P+ +TF SV+ ACA +   ++  
Sbjct: 76  PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 135

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
            IH  V+ +G  SD+++ NAL+D+Y +   ++ + ++F E P R+ V+WN++I GY   G
Sbjct: 136 SIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG 195

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN 483
              +A+ ++ +     V     T SSVLRAC  L ++E G  +H L  K     DV+V N
Sbjct: 196 YWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNN 255

Query: 484 ALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRP 543
            L+ MY K   + D R +FD M   + VSWN MI GYS  GL  E +K+F  M  + ++P
Sbjct: 256 GLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKP 314

Query: 544 NNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKL 603
           + LT   +L AC + G LE G+     M+ + G E        ++++  + G+L  + ++
Sbjct: 315 DLLTITSILQACGHLGDLEFGKYVHDYMITS-GYECDTTASNILINMYAKCGNLLASQEV 373

Query: 604 IEGIPFQPSVMIWRALLGACIIHNNV-EIGRLSAQHILDFEPEDEATHVLL 653
             G+  + SV  W +++   I + +  E  +L      D +P D  T+V+L
Sbjct: 374 FSGMKCKDSVS-WNSMINVYIQNGSFDEAMKLFKMMKTDVKP-DSVTYVML 422



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 165/351 (47%), Gaps = 36/351 (10%)

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           Q  F S+ +A A+       +++HSL++ +GL   V  S  L+  YA      +S  +F 
Sbjct: 13  QTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFR 72

Query: 403 -ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
             SP  N   WN++I      G   +A+ ++S+    ++     T+ SV+ ACA L   E
Sbjct: 73  LASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFE 132

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
               +H   +   +  D+ + NALIDMY +   +  AR VF+ M   + VSWN++ISGY+
Sbjct: 133 MAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYN 192

Query: 522 MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE---------AYFKSMV 572
            +G   E L+++   +  G  P++ T   VL AC   G +E+G+            K ++
Sbjct: 193 ANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVI 252

Query: 573 ANYGI-------EPCIE--------------HYTSMVSLLGRAGHLDKAAKLIEGI--PF 609
            N G+          I+               + +M+    + G  +++ KL   +   F
Sbjct: 253 VNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQF 312

Query: 610 QPSVMIWRALLGACIIHNNVEIGRLSAQHIL--DFEPEDEATHVLLSNIYA 658
           +P ++   ++L AC    ++E G+    +++   +E +  A+++L+ N+YA
Sbjct: 313 KPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILI-NMYA 362


>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 679

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 237/594 (39%), Positives = 367/594 (61%), Gaps = 11/594 (1%)

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
           F  AL  F +MRA G  P++  F  VLK+C  +  +R  +S HG  ++   + DLY   A
Sbjct: 86  FSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNA 145

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+++Y+K   I + R++FE MP+KDV+ ++ +IA YAQ+ +  DA+ +   M  + + P+
Sbjct: 146 LMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPD 205

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
            FT  SVL   +    +  G +IH  V+R G+ SDV++ ++L+D+YAK  R+E+S  +F+
Sbjct: 206 AFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFS 265

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
              +R+ ++WN+++ GYVQ G   +A+ +F +M+  +V    V +SSV+ ACA LA L  
Sbjct: 266 HLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHL 325

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G Q+H   ++  +  ++ +A+AL+DMY+KCG+I  AR +FD MN  +EVSW A+I G+++
Sbjct: 326 GKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHAL 385

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
           HG   E + +F+ M+++G +PN + FV VL+ACS+ GL+++   YF SM   YG+   +E
Sbjct: 386 HGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELE 445

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDF 642
           HY ++  LLGRAG L++A   I  +  +P+  +W  LL +C +H N+E+    A+ I   
Sbjct: 446 HYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTI 505

Query: 643 EPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTS 691
           + E+   +VL+ N+YA    W++ A            K+P  SWIE +   H F +GD S
Sbjct: 506 DSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSGDRS 565

Query: 692 HADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMP 751
           H  M+ I   L+ +  +  K GY+ D S VL DV E+ K   L+ HSE+LA+AF +    
Sbjct: 566 HPSMDRINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTE 625

Query: 752 PSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           P + IR+ KN+RIC DCH AIK ISKI +REII+RD  RFHHF  G CSCGD+W
Sbjct: 626 PGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGSCSCGDYW 679



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 117/467 (25%), Positives = 227/467 (48%), Gaps = 19/467 (4%)

Query: 75  AMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTV 134
           A  +H Q ++    L   + ++++++Y  L  L +A  +F  +     +++ + I+ +T 
Sbjct: 24  AKQLHAQFIRT-QSLSHTSASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTD 82

Query: 135 SSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFV 194
            S F  A+  F  +   G   +   F + LK    M        V   + +LG D + + 
Sbjct: 83  QSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYT 142

Query: 195 GTALIDAFSVCGCVEFARKVFDGL-------FNDC---------FEEALNFFSQMRAVGF 238
           G AL++ +S    ++  RKVF+ +       +N           +E+AL    +M     
Sbjct: 143 GNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDL 202

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
           KP+ FT + VL        +   K  HG  ++   + D+Y+  +L+D+Y KS  I ++ R
Sbjct: 203 KPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSER 262

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           +F  + ++D I W+ ++A Y Q     +A+ LF +M  A V P    F SV+ ACA +  
Sbjct: 263 VFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLAT 322

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           L LG Q+H  V+R G   ++F+++AL+D+Y+KCG ++ + ++F      + V+W  +I+G
Sbjct: 323 LHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMG 382

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL-EPGMQVHCLTVKANYDM 477
           +   G   +A+ +F +M  + V   +V + +VL AC+ +  + E     + +T     + 
Sbjct: 383 HALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQ 442

Query: 478 DVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
           ++    A+ D+  + G + +A   +  M  +     W+ ++S  S+H
Sbjct: 443 ELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVH 489



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 182/362 (50%), Gaps = 17/362 (4%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           + + L+SC    DL+   ++H  +++ G   DL+  N L+N+Y KL  +    K+F+ MP
Sbjct: 108 FPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMP 167

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
            ++ +S+ T I GY  S  + +A+ +   +     + + F  ++ L +            
Sbjct: 168 RKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKE 227

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDC 222
           +   V + G DS+ ++G++L+D ++    +E + +VF  L+                N  
Sbjct: 228 IHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGR 287

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
           + EAL  F QM +   +P    F+ V+ AC  L T+ + K  HG  L+  +  ++++A A
Sbjct: 288 YNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASA 347

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+D+Y+K G I  AR+IF+ M   D + W+ +I  +A      +AV LF  M++  V PN
Sbjct: 348 LVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPN 407

Query: 343 QFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           Q  FV+VL AC+ +  +D      +S+    GL  ++    A+ D+  + G++E + +  
Sbjct: 408 QVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFI 467

Query: 402 AE 403
           ++
Sbjct: 468 SK 469



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 95/349 (27%), Positives = 173/349 (49%), Gaps = 2/349 (0%)

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
           A  ++ +YT    +  A  +F+ +    V+ W  +I  +    L   A+  F  MR +  
Sbjct: 42  ASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGR 101

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
            P+   F SVL++C  M  L  G  +H  +VR+G+  D++  NALM++Y+K   +++  +
Sbjct: 102 CPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRK 161

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +F   P+++ V++NT+I GY Q G    A+ M  +M    +     T SSVL   +    
Sbjct: 162 VFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVD 221

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
           +  G ++H   ++   D DV + ++L+DMYAK   I D+  VF  +   + +SWN++++G
Sbjct: 222 VLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAG 281

Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
           Y  +G   E L++F  M     RP  + F  V+ AC++   L  G+      V   G   
Sbjct: 282 YVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQ-LHGYVLRGGFGR 340

Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
            I   +++V +  + G++  A K+ + +     V  W A++    +H +
Sbjct: 341 NIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVS-WTAIIMGHALHGH 388



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 23/198 (11%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           ++++ + +C     L     +H  VL+ G   ++F  + L+++Y K   +  A K+FD M
Sbjct: 309 AFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRM 368

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
              + +S+   I G+ +     EAV LF  + R+G + N  AF A L     +G  +   
Sbjct: 369 NLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAW 428

Query: 178 CVFAC---VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMR 234
             F     VY L  +   +   A  D     G +               EEA +F S+MR
Sbjct: 429 GYFNSMTKVYGLNQELEHYAAVA--DLLGRAGKL---------------EEAYDFISKMR 471

Query: 235 AVGFKPNNFTFAFVLKAC 252
               +P    ++ +L +C
Sbjct: 472 V---EPTGSVWSTLLSSC 486


>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
 gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
          Length = 814

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 294/815 (36%), Positives = 440/815 (53%), Gaps = 73/815 (8%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLK--KGNCLDLFATNVLLNVYVKLNRLPDATK 112
           ++ ++   L++     +L     IH  V K   G+   +   N L+N+Y K   L DA K
Sbjct: 9   DNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAYK 68

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +FD + ER+ +S+ + I       ++  A+  F  +  EG E  P +FT     LVSM  
Sbjct: 69  VFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFE--PSSFT-----LVSMAL 121

Query: 173 A----------ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--- 219
           A           L   +  C ++ GH    F   AL+  ++  G ++ A+ +   LF   
Sbjct: 122 ACSNLRKRDGLWLGKQIHGCCFRKGH-WRTFSNNALMAMYAKLGRLDDAKSLLV-LFEDR 179

Query: 220 --------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAH 265
                         N+ F EAL F   M   G KP+  TFA VL AC  LD +R  K  H
Sbjct: 180 DLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIH 239

Query: 266 GCALKTCYEMD-LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLS 324
             AL+T   ++  +V  AL+D+Y   G++ + R +F+ +  + +  W+ MIA YAQ++  
Sbjct: 240 AYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHD 299

Query: 325 IDAVELFCRMRQAF-VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNA 383
             A+ LF  M  A  +  N  T  S++ A    EG+     IH  V++ GL ++ ++ NA
Sbjct: 300 EKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNA 359

Query: 384 LMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML------- 436
           L+D+Y++ G ++ S  +F     R+ V+WNT+I  YV  G    A+++  +M        
Sbjct: 360 LIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKST 419

Query: 437 -------EEQVP--ATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALID 487
                  E+QVP     +T  +VL  CASL+AL  G ++H   ++      V V +AL+D
Sbjct: 420 YDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVD 479

Query: 488 MYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR----- 542
           MYAKCG +  AR VFD M   N ++WN +I  Y MHG   E L++F+ M   G +     
Sbjct: 480 MYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVK 539

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           P  +TF+ + ++CS+ G++++G + F  M   +GIEP  +HY  +V L+GRAG +++A  
Sbjct: 540 PTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYG 599

Query: 603 LIEGIPFQ-PSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMAR 661
           L+  +P     V  W +LLGAC I++N+EIG ++A+++L  +P+  + +VLLSNIY+ A 
Sbjct: 600 LVNTMPSGFDKVGAWSSLLGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSAG 659

Query: 662 SWEKA-----------ASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSR 710
            W+KA             KEPG SWIE    VH F AGD SH     +   LE L+ + +
Sbjct: 660 LWDKAMNLRRRMKAMGVKKEPGCSWIEYGDEVHKFLAGDLSHPQSEKLHDFLETLSERLK 719

Query: 711 KAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHT 770
           K GY+PD + VL D+ E+EKE  L  HSEKLA+AF +   PP + IR+ KNLR+C DCHT
Sbjct: 720 KEGYVPDTACVLHDIDEEEKETILCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHT 779

Query: 771 AIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           A K ISKI  REII+RD  RFHHF+DG CSCGD+W
Sbjct: 780 ASKFISKIEDREIILRDARRFHHFKDGTCSCGDYW 814



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 139/516 (26%), Positives = 251/516 (48%), Gaps = 42/516 (8%)

Query: 152 GHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHD--SNAFVGTALIDAFSVCGCVE 209
           G   + FAF A LK +  +    L   + A V+K G+   S+  +   L++ +  CG + 
Sbjct: 5   GFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLG 64

Query: 210 FARKVFDGL-------FNDC------FEE---ALNFFSQMRAVGFKPNNFTFAFVLKACL 253
            A KVFD +       +N        FEE   A+  F  M   GF+P++FT   +  AC 
Sbjct: 65  DAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACS 124

Query: 254 GL---DTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIP 310
            L   D + + K  HGC  +  +    +   AL+ +Y K G + +A+ +      +D++ 
Sbjct: 125 NLRKRDGLWLGKQIHGCCFRKGH-WRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVT 183

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV 370
           W+ MI+ ++Q +  ++A+     M    V P+  TF SVL AC+ ++ L  G +IH+  +
Sbjct: 184 WNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYAL 243

Query: 371 RV-GLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAM 429
           R   ++ + FV +AL+D+Y  CG++E+   +F     R    WN MI GY Q     KA+
Sbjct: 244 RTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKAL 303

Query: 430 IMFSKM-LEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDM 488
           ++F +M     + +   T SS++ A      +     +H   +K   + +  + NALIDM
Sbjct: 304 MLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDM 363

Query: 489 YAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQ----------- 537
           Y++ G I  ++ +FD M D + VSWN +I+ Y + G S++ L +   MQ           
Sbjct: 364 YSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGD 423

Query: 538 -----QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
                Q  ++PN++T + VL  C++   L +G+      + N  +   +   +++V +  
Sbjct: 424 YNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNL-LASQVTVGSALVDMYA 482

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
           + G L+ A ++ + +P + +V+ W  ++ A  +H  
Sbjct: 483 KCGCLNLARRVFDQMPIR-NVITWNVIIMAYGMHGK 517


>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Vitis vinifera]
          Length = 802

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 281/788 (35%), Positives = 432/788 (54%), Gaps = 38/788 (4%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
            +S +Y   +Q   +   L      H  ++K      LF  N LL +Y K      A KL
Sbjct: 17  LDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKKL 76

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           FD MP+RN +S+ + I GYT    + E + LF         L+ F F+  L V       
Sbjct: 77  FDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDL 136

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF--- 223
            L   + A +   G      +  +LID +  CG +++AR VF+         +N      
Sbjct: 137 RLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGY 196

Query: 224 ------EEALNFFSQMRAVGFKPNNFTFAFVLKACLG--LDTIRVAKSAHGCALKTCYEM 275
                 +E L    +M   G   N++     LKAC      +I   K  HGCA+K   ++
Sbjct: 197 VRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDL 256

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSID-----AVEL 330
           D+ V  ALLD Y K G++ +A +IF+ MP  +V+ ++ MIA + Q +   D     A+ L
Sbjct: 257 DVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYL 316

Query: 331 FCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAK 390
           F  M+   + P++FTF S+L+AC+T+E  + G QIH+ + +  L SD F+ NAL+++Y+ 
Sbjct: 317 FFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSL 376

Query: 391 CGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
            G +E+ ++ F  +PK + V+W ++IVG+VQ G+    + +F ++L       E T S +
Sbjct: 377 SGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIM 436

Query: 451 LRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE 510
           L ACA+LAA++ G Q+H   +K       ++ N+ I MYAKCG I  A + F    + + 
Sbjct: 437 LSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDI 496

Query: 511 VSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKS 570
           VSW+ MIS  + HG + E + +F+LM+  G  PN++TF+GVL ACS+GGL+E+G  YF+ 
Sbjct: 497 VSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEI 556

Query: 571 MVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
           M  ++GI P ++H   +V LLGRAG L +A   I    F+   ++WR+LL AC +H   +
Sbjct: 557 MKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATD 616

Query: 631 IGRLSAQHILDFEPEDEATHVLLSNIYAMA---------RSW--EKAASKEPGLSWIENQ 679
            G+  A+ +++ EPE  A++VLL NIY  A         R+   ++   KEPGLSWIE  
Sbjct: 617 TGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVG 676

Query: 680 GMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWV--H 737
            +VH F AGD SH +  +I   LE +  + +K  YI +   ++ D  E + +    V  H
Sbjct: 677 NVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYIDE--KLVSDASEPKHKDNSMVSYH 734

Query: 738 SEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDG 797
           SEKLA+ F +  +P S+P+R++KNLR C  CH  +K+ S++  REII+RD  RFH F+DG
Sbjct: 735 SEKLAVTFGIISLPRSAPVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRFHRFRDG 794

Query: 798 CCSCGDFW 805
            CSCGD+W
Sbjct: 795 SCSCGDYW 802



 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 142/477 (29%), Positives = 250/477 (52%), Gaps = 20/477 (4%)

Query: 236 VGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISN 295
           +G   ++ T+  +++      ++   K AH   +KTC++  L++   LL +Y K GE   
Sbjct: 13  LGLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDV 72

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACAT 355
           A+++F+ MPK++V+ W+ +I+ Y Q     + + LF   R + +  ++FTF + L  C  
Sbjct: 73  AKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGR 132

Query: 356 MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTM 415
              L LG  IH+L+   GL   V ++N+L+D+Y KCGR++ +  +F  + + + V+WN++
Sbjct: 133 TLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSL 192

Query: 416 IVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS--LAALEPGMQVHCLTVKA 473
           I GYV++G   + + +  KML   +        S L+AC S   +++E G  +H   VK 
Sbjct: 193 IAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKL 252

Query: 474 NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY-SMHGL----SAE 528
             D+DVVV  AL+D YAK G + DA  +F +M D N V +NAMI+G+  M  +    + E
Sbjct: 253 GLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANE 312

Query: 529 VLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMV 588
            + +F  MQ RG +P+  TF  +L ACS     E G+    + +  Y ++       ++V
Sbjct: 313 AMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQ-IHAQIFKYNLQSDEFIGNALV 371

Query: 589 SLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDF---EPE 645
            L   +G ++   K     P +  V+ W +L+   + +   E G L+  H L F   +P+
Sbjct: 372 ELYSLSGSIEDGLKCFHSTP-KLDVVSWTSLIVGHVQNGQFE-GGLTLFHELLFSGRKPD 429

Query: 646 DEATHVLLSNIYAMA--RSWEK--AASKEPGL---SWIENQGMVHYFRAGDTSHADM 695
           +    ++LS    +A  +S E+  A + + G+   + I+N  +  Y + GD   A+M
Sbjct: 430 EFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANM 486


>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Cucumis sativus]
          Length = 1573

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 268/727 (36%), Positives = 397/727 (54%), Gaps = 31/727 (4%)

Query: 110  ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
            A K+F      N  ++   +  +  + Q V A+  F TL R     +       L   V 
Sbjct: 847  AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVG 906

Query: 170  MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF-------------- 215
                +L   + A V K        V  +L++ +S  G V  A K F              
Sbjct: 907  ADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTM 966

Query: 216  --DGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDT---IRVAKSAHGCALK 270
                  N+   EA+  F  +   G KP+ FT A VL+AC   D      +    H  A+K
Sbjct: 967  ISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIK 1026

Query: 271  TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVEL 330
                 D +V+ AL+DLY+K G++  A  +       D+  W+ ++  Y +++ S  A+E 
Sbjct: 1027 CGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEH 1086

Query: 331  FCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAK 390
            F  M +  +  ++ T  + ++A   +  L  G QI +  +++G  +D++VS+ ++D+Y K
Sbjct: 1087 FSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIK 1146

Query: 391  CGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
            CG M N++ELF E  + + V W TMI GY++ G+   A+ ++  M    V   E T++++
Sbjct: 1147 CGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATL 1206

Query: 451  LRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE 510
            ++A + L ALE G Q+H   VK +Y +D  V  +L+DMY KCGS+ DA  VF  M+    
Sbjct: 1207 IKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKV 1266

Query: 511  VSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKS 570
            V WNAM+ G + HG   E L +F  MQ  G +P+ +TF+GVLSACS+ GL  +   YF +
Sbjct: 1267 VFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDA 1326

Query: 571  MVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
            M   YGI P IEHY+ +V  LGRAG + +A  +I  +PF+ S  ++RALLGAC    + E
Sbjct: 1327 MFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAE 1386

Query: 631  IGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQ 679
              +  A  +L  +P D + +VLLSNIYA +R W+           K   K+PG SWI+ +
Sbjct: 1387 TAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVK 1446

Query: 680  GMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAG-YIPDLSAVLRDVREDEKERYLWVHS 738
              VH F   D SH   ++I   +E L  + R+ G Y+PD    L DV E+EKER L+ HS
Sbjct: 1447 NKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHS 1506

Query: 739  EKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGC 798
            EKLA+AF L   PPS+ IR+IKNLR+C DCH+AIK ISK+ QREI++RD +RFHHF++G 
Sbjct: 1507 EKLAIAFGLISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGT 1566

Query: 799  CSCGDFW 805
            CSCGD+W
Sbjct: 1567 CSCGDYW 1573



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 165/576 (28%), Positives = 294/576 (51%), Gaps = 42/576 (7%)

Query: 72   LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
            +Q + T+H   +K G  LDLF +  L+N+Y K   +  A  LFD+MPER+ + +   ++ 
Sbjct: 733  VQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKA 792

Query: 132  YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW------------AELCPCV 179
            Y  +S   EA+  FS  HR G       F  F  +   +G             AE     
Sbjct: 793  YVENSFQDEALRFFSAFHRSGF------FPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAY 846

Query: 180  FACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFK 239
               ++     SN F     +  F   G +  A         DCF+  L        +G  
Sbjct: 847  AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAI--------DCFKTLLR-----STIGH- 892

Query: 240  PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
             ++ T   +L A +G D + + +  H   +K+ +   + V+ +L+++Y+K+G +  A + 
Sbjct: 893  -DSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKT 951

Query: 300  FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACAT---M 356
            F   P+ D+I W+ MI+ YAQ +L ++A+  F  + +  + P+QFT  SVL+AC+T    
Sbjct: 952  FINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEG 1011

Query: 357  EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMI 416
            E   LG+Q+H   ++ G+++D FVS AL+D+Y+K G+M+ +  L       +  +WN ++
Sbjct: 1012 EYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIM 1071

Query: 417  VGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD 476
             GY++  +  KA+  FS M E  +P  E+T ++ ++A   L  L+ G Q+    +K  ++
Sbjct: 1072 FGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFN 1131

Query: 477  MDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLM 536
             D+ V++ ++DMY KCG + +A  +F  ++  +EV+W  MISGY  +G     L V+ LM
Sbjct: 1132 NDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLM 1191

Query: 537  QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY--TSMVSLLGRA 594
            +  G +P+  TF  ++ A S    LEQG+    ++V    ++  ++H+  TS+V +  + 
Sbjct: 1192 RVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVK---LDYSLDHFVGTSLVDMYCKC 1248

Query: 595  GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
            G +  A ++   +  +  V+ W A+L     H +V+
Sbjct: 1249 GSVQDAYRVFRKMDVR-KVVFWNAMLLGLAQHGHVD 1283



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 121/412 (29%), Positives = 207/412 (50%), Gaps = 19/412 (4%)

Query: 63   LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
            L + +  DDL     IH  V+K      +  +N L+N+Y K   +  A K F   PE + 
Sbjct: 901  LSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDL 960

Query: 123  ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE---LCPCV 179
            IS+ T I  Y  ++  +EA+  F  L R+G + + F   + L+   +    E   L   V
Sbjct: 961  ISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQV 1020

Query: 180  FACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN----------------DCF 223
                 K G  +++FV TALID +S  G ++ A  +  G ++                +  
Sbjct: 1021 HVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKS 1080

Query: 224  EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
             +AL  FS M  +G   +  T A  +KA   L  ++  K     A+K  +  DL+V+  +
Sbjct: 1081 RKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGV 1140

Query: 284  LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
            LD+Y K G++ NA  +F E+ + D + W+ MI+ Y +      A+ ++  MR + V P++
Sbjct: 1141 LDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDE 1200

Query: 344  FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
            +TF ++++A + +  L+ G QIH+ VV++    D FV  +L+D+Y KCG ++++  +F +
Sbjct: 1201 YTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRK 1260

Query: 404  SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
               R  V WN M++G  Q G V +A+ +F  M    +   +VT+  VL AC+
Sbjct: 1261 MDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACS 1312



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 148/602 (24%), Positives = 270/602 (44%), Gaps = 54/602 (8%)

Query: 64   QSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTI 123
            +S I   DL+     H +++  G+  D + TN L+ +Y K   L  A ++FD+  +R+ +
Sbjct: 619  RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678

Query: 124  SFVTTIQGY-----TVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
            ++ + +  Y     +     +E   LF  L   G  +        LK+ +  G+ ++   
Sbjct: 679  TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSET 738

Query: 179  VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDC 222
            V     K+G + + FV  AL++ +   G V  AR +FD +                 N  
Sbjct: 739  VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSF 798

Query: 223  FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDT-IRVAKSAHGCALKTCYEMDLYVAV 281
             +EAL FFS     GF P+   F+ +     G+++ +   +  H   +K  Y M ++   
Sbjct: 799  QDEALRFFSAFHRSGFFPD---FSNLHCVIGGVNSDVSNNRKRHAEQVK-AYAMKMFP-- 852

Query: 282  ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
                              F++    ++  W+  +  +      + A++ F  + ++ +  
Sbjct: 853  ------------------FDQ--GSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGH 892

Query: 342  NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
            +  T V +L A    + LDLG QIH+LV++      V VSN+LM++Y+K G +  + + F
Sbjct: 893  DSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTF 952

Query: 402  AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
              SP+ + ++WNTMI  Y Q     +A+  F  +L + +   + T +SVLRAC++    E
Sbjct: 953  INSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGE 1012

Query: 462  P---GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
                G QVH   +K     D  V+ ALID+Y+K G + +A  +     D++  SWNA++ 
Sbjct: 1013 YFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMF 1072

Query: 519  GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
            GY     S + L+ F LM + G   + +T    + A      L+QG+   ++     G  
Sbjct: 1073 GYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQ-IQAYAIKLGFN 1131

Query: 579  PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
              +   + ++ +  + G +  A +L   I  +P  + W  ++    I N  E   LS  H
Sbjct: 1132 NDLWVSSGVLDMYIKCGDMPNALELFGEIS-RPDEVAWTTMISG-YIENGDEDHALSVYH 1189

Query: 639  IL 640
            ++
Sbjct: 1190 LM 1191



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 118/266 (44%), Gaps = 23/266 (8%)

Query: 60   ATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPE 119
            A     C+ N  L+    I    +K G   DL+ ++ +L++Y+K   +P+A +LF E+  
Sbjct: 1105 AIKASGCLIN--LKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISR 1162

Query: 120  RNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCV 179
             + +++ T I GY  +     A+ ++  +   G + + + F   +K    +   E    +
Sbjct: 1163 PDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQI 1222

Query: 180  FACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GLFNDC-F 223
             A V KL +  + FVGT+L+D +  CG V+ A +VF                GL      
Sbjct: 1223 HANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHV 1282

Query: 224  EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT---CYEMDLYVA 280
            +EALN F  M++ G +P+  TF  VL AC        A        KT     E++ Y  
Sbjct: 1283 DEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHY-- 1340

Query: 281  VALLDLYTKSGEISNARRIFEEMPKK 306
              L+D   ++G I  A  +   MP K
Sbjct: 1341 SCLVDALGRAGRIQEAENVIASMPFK 1366



 Score = 44.7 bits (104), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 37/161 (22%), Positives = 66/161 (40%), Gaps = 1/161 (0%)

Query: 55   NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
            + +++AT +++      L+    IH  V+K    LD F    L+++Y K   + DA ++F
Sbjct: 1199 DEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVF 1258

Query: 115  DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             +M  R  + +   + G        EA+ LF T+   G + +   F   L      G   
Sbjct: 1259 RKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFS 1318

Query: 175  LCPCVFACVYK-LGHDSNAFVGTALIDAFSVCGCVEFARKV 214
                 F  ++K  G        + L+DA    G ++ A  V
Sbjct: 1319 EAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENV 1359


>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 268/727 (36%), Positives = 397/727 (54%), Gaps = 31/727 (4%)

Query: 110  ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
            A K+F      N  ++   +  +  + Q V A+  F TL R     +       L   V 
Sbjct: 847  AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVG 906

Query: 170  MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF-------------- 215
                +L   + A V K        V  +L++ +S  G V  A K F              
Sbjct: 907  ADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTM 966

Query: 216  --DGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDT---IRVAKSAHGCALK 270
                  N+   EA+  F  +   G KP+ FT A VL+AC   D      +    H  A+K
Sbjct: 967  ISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIK 1026

Query: 271  TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVEL 330
                 D +V+ AL+DLY+K G++  A  +       D+  W+ ++  Y +++ S  A+E 
Sbjct: 1027 CGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEH 1086

Query: 331  FCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAK 390
            F  M +  +  ++ T  + ++A   +  L  G QI +  +++G  +D++VS+ ++D+Y K
Sbjct: 1087 FSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIK 1146

Query: 391  CGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
            CG M N++ELF E  + + V W TMI GY++ G+   A+ ++  M    V   E T++++
Sbjct: 1147 CGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATL 1206

Query: 451  LRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE 510
            ++A + L ALE G Q+H   VK +Y +D  V  +L+DMY KCGS+ DA  VF  M+    
Sbjct: 1207 IKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKV 1266

Query: 511  VSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKS 570
            V WNAM+ G + HG   E L +F  MQ  G +P+ +TF+GVLSACS+ GL  +   YF +
Sbjct: 1267 VFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDA 1326

Query: 571  MVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
            M   YGI P IEHY+ +V  LGRAG + +A  +I  +PF+ S  ++RALLGAC    + E
Sbjct: 1327 MFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAE 1386

Query: 631  IGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQ 679
              +  A  +L  +P D + +VLLSNIYA +R W+           K   K+PG SWI+ +
Sbjct: 1387 TAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVK 1446

Query: 680  GMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAG-YIPDLSAVLRDVREDEKERYLWVHS 738
              VH F   D SH   ++I   +E L  + R+ G Y+PD    L DV E+EKER L+ HS
Sbjct: 1447 NKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHS 1506

Query: 739  EKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGC 798
            EKLA+AF L   PPS+ IR+IKNLR+C DCH+AIK ISK+ QREI++RD +RFHHF++G 
Sbjct: 1507 EKLAIAFGLISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGT 1566

Query: 799  CSCGDFW 805
            CSCGD+W
Sbjct: 1567 CSCGDYW 1573



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 164/573 (28%), Positives = 295/573 (51%), Gaps = 36/573 (6%)

Query: 72   LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
            +Q + T+H   +K G  LDLF +  L+N+Y K   +  A  LFD+MPER+ + +   ++ 
Sbjct: 733  VQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKA 792

Query: 132  YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG---------WAELCPCVFAC 182
            Y  +S   EA+  FS  HR G   +   F+    V+  +           AE        
Sbjct: 793  YVENSFQDEALRFFSAFHRSGFXPD---FSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMK 849

Query: 183  VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNN 242
            ++     SN F     +  F   G +  A         DCF+  L        +G   ++
Sbjct: 850  MFPFDQGSNIFAWNKKLTEFLHAGQIVAAI--------DCFKTLLR-----STIGH--DS 894

Query: 243  FTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEE 302
             T   +L A +G D + + +  H   +K+ +   + V+ +L+++Y+K+G +  A + F  
Sbjct: 895  VTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFIN 954

Query: 303  MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACAT---MEGL 359
             P+ D+I W+ MI+ YAQ +L ++A+  F  + +  + P+QFT  SVL+AC+T    E  
Sbjct: 955  SPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYF 1014

Query: 360  DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGY 419
             LG+Q+H   ++ G+++D FVS AL+D+Y+K G+M+ +  L       +  +WN ++ GY
Sbjct: 1015 TLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGY 1074

Query: 420  VQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDV 479
            ++  +  KA+  FS M E  +P  E+T ++ ++A   L  L+ G Q+    +K  ++ D+
Sbjct: 1075 IKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDL 1134

Query: 480  VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
             V++ ++DMY KCG + +A  +F  ++  +EV+W  MISGY  +G     L V+ LM+  
Sbjct: 1135 WVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVS 1194

Query: 540  GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY--TSMVSLLGRAGHL 597
            G +P+  TF  ++ A S    LEQG+    ++V    ++  ++H+  TS+V +  + G +
Sbjct: 1195 GVQPDEYTFATLIKASSCLTALEQGKQIHANVVK---LDYSLDHFVGTSLVDMYCKCGSV 1251

Query: 598  DKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
              A ++   +  +  V+ W A+L     H +V+
Sbjct: 1252 QDAYRVFRKMDVR-KVVFWNAMLLGLAQHGHVD 1283



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 121/412 (29%), Positives = 207/412 (50%), Gaps = 19/412 (4%)

Query: 63   LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
            L + +  DDL     IH  V+K      +  +N L+N+Y K   +  A K F   PE + 
Sbjct: 901  LSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDL 960

Query: 123  ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE---LCPCV 179
            IS+ T I  Y  ++  +EA+  F  L R+G + + F   + L+   +    E   L   V
Sbjct: 961  ISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQV 1020

Query: 180  FACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN----------------DCF 223
                 K G  +++FV TALID +S  G ++ A  +  G ++                +  
Sbjct: 1021 HVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKS 1080

Query: 224  EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
             +AL  FS M  +G   +  T A  +KA   L  ++  K     A+K  +  DL+V+  +
Sbjct: 1081 RKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGV 1140

Query: 284  LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
            LD+Y K G++ NA  +F E+ + D + W+ MI+ Y +      A+ ++  MR + V P++
Sbjct: 1141 LDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDE 1200

Query: 344  FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
            +TF ++++A + +  L+ G QIH+ VV++    D FV  +L+D+Y KCG ++++  +F +
Sbjct: 1201 YTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRK 1260

Query: 404  SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
               R  V WN M++G  Q G V +A+ +F  M    +   +VT+  VL AC+
Sbjct: 1261 MDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACS 1312



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 148/602 (24%), Positives = 270/602 (44%), Gaps = 54/602 (8%)

Query: 64   QSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTI 123
            +S I   DL+     H +++  G+  D + TN L+ +Y K   L  A ++FD+  +R+ +
Sbjct: 619  RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678

Query: 124  SFVTTIQGY-----TVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
            ++ + +  Y     +     +E   LF  L   G  +        LK+ +  G+ ++   
Sbjct: 679  TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSET 738

Query: 179  VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDC 222
            V     K+G + + FV  AL++ +   G V  AR +FD +                 N  
Sbjct: 739  VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSF 798

Query: 223  FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDT-IRVAKSAHGCALKTCYEMDLYVAV 281
             +EAL FFS     GF P+   F+ +     G+++ +   +  H   +K  Y M ++   
Sbjct: 799  QDEALRFFSAFHRSGFXPD---FSNLHCVIGGVNSDVSNNRKRHAEQVK-AYAMKMFP-- 852

Query: 282  ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
                              F++    ++  W+  +  +      + A++ F  + ++ +  
Sbjct: 853  ------------------FDQ--GSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGH 892

Query: 342  NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
            +  T V +L A    + LDLG QIH+LV++      V VSN+LM++Y+K G +  + + F
Sbjct: 893  DSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTF 952

Query: 402  AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
              SP+ + ++WNTMI  Y Q     +A+  F  +L + +   + T +SVLRAC++    E
Sbjct: 953  INSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGE 1012

Query: 462  P---GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
                G QVH   +K     D  V+ ALID+Y+K G + +A  +     D++  SWNA++ 
Sbjct: 1013 YFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMF 1072

Query: 519  GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
            GY     S + L+ F LM + G   + +T    + A      L+QG+   ++     G  
Sbjct: 1073 GYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQ-IQAYAIKLGFN 1131

Query: 579  PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
              +   + ++ +  + G +  A +L   I  +P  + W  ++    I N  E   LS  H
Sbjct: 1132 NDLWVSSGVLDMYIKCGDMPNALELFGEIS-RPDEVAWTTMISG-YIENGDEDHALSVYH 1189

Query: 639  IL 640
            ++
Sbjct: 1190 LM 1191



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 118/266 (44%), Gaps = 23/266 (8%)

Query: 60   ATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPE 119
            A     C+ N  L+    I    +K G   DL+ ++ +L++Y+K   +P+A +LF E+  
Sbjct: 1105 AIKASGCLIN--LKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISR 1162

Query: 120  RNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCV 179
             + +++ T I GY  +     A+ ++  +   G + + + F   +K    +   E    +
Sbjct: 1163 PDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQI 1222

Query: 180  FACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GLFNDC-F 223
             A V KL +  + FVGT+L+D +  CG V+ A +VF                GL      
Sbjct: 1223 HANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHV 1282

Query: 224  EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT---CYEMDLYVA 280
            +EALN F  M++ G +P+  TF  VL AC        A        KT     E++ Y  
Sbjct: 1283 DEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHY-- 1340

Query: 281  VALLDLYTKSGEISNARRIFEEMPKK 306
              L+D   ++G I  A  +   MP K
Sbjct: 1341 SCLVDALGRAGRIQEAENVIASMPFK 1366



 Score = 44.7 bits (104), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 37/161 (22%), Positives = 66/161 (40%), Gaps = 1/161 (0%)

Query: 55   NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
            + +++AT +++      L+    IH  V+K    LD F    L+++Y K   + DA ++F
Sbjct: 1199 DEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVF 1258

Query: 115  DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             +M  R  + +   + G        EA+ LF T+   G + +   F   L      G   
Sbjct: 1259 RKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFS 1318

Query: 175  LCPCVFACVYK-LGHDSNAFVGTALIDAFSVCGCVEFARKV 214
                 F  ++K  G        + L+DA    G ++ A  V
Sbjct: 1319 EAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENV 1359


>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
           [Solanum demissum]
          Length = 819

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 274/741 (36%), Positives = 412/741 (55%), Gaps = 28/741 (3%)

Query: 93  ATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREG 152
           + N++++ YVK   L  A +LF+ M  RN +S+   I GY+ ++Q  EA  L++ + R G
Sbjct: 79  SVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSG 138

Query: 153 HELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFAR 212
            + +   F   L         +    + + + + G  ++  V  +L+D++    C++ A 
Sbjct: 139 VKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIAS 198

Query: 213 KVFDGL-------FNDCF---------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLD 256
           ++F  +       FN            EEAL  F QMR + F+P+ FTFA +L   +G +
Sbjct: 199 QLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSE 258

Query: 257 TIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIA 316
            +   +  HG A+KT Y  D++VA ALLD Y+K   I  A+ +F+EMP+ D + ++ +I 
Sbjct: 259 DVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIIT 318

Query: 317 RYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLS 376
            YA       + +LF R++        F F ++L   A    L +G Q H+  V    +S
Sbjct: 319 GYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVS 378

Query: 377 DVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML 436
           +V V NAL+D+YAKC + E++  +FA    RN V W  +I  YVQ G   +A+ MF +M 
Sbjct: 379 EVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMN 438

Query: 437 EEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSIT 496
            E V   + T++S L+A A+LA++  G Q+H   ++      V   + L+DMYA CGS+ 
Sbjct: 439 RENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMK 498

Query: 497 DARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS 556
           DA  VF  M D N V WNA+IS YS +G +      F  M + G  P++++F+ VL+ACS
Sbjct: 499 DAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACS 558

Query: 557 NGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIW 616
           + GL+E+   YF SM   Y ++P  +HY +M+ +L R+G  ++A  LI  +PF+P  ++W
Sbjct: 559 HRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMW 618

Query: 617 RALLGACIIHNNVEIGRLSAQHILDFEP-EDEATHVLLSNIYAMARSWEKAAS-----KE 670
            ++L +C IH N ++ + +A  +   +   D A +V +SNIYA A  WE AA      +E
Sbjct: 619 SSVLNSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRE 678

Query: 671 PGL------SWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRD 724
            G+      SW+E    VH F A D +H     IR  +  L     K GY PD S  L++
Sbjct: 679 RGVKKVTAYSWVEIDHRVHVFTANDRTHPQTEQIRRKINSLVELMDKEGYKPDTSCTLQN 738

Query: 725 VREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREII 784
           V E+ K   L  HSE+LA+AFAL   P  SPI I+KNLR CVDCH AIK+ISKIV REI 
Sbjct: 739 VDEEMKIESLKYHSERLAIAFALINTPEGSPIIIMKNLRACVDCHAAIKVISKIVGREIT 798

Query: 785 IRDVHRFHHFQDGCCSCGDFW 805
           +RD  RFHHF+DG CSCGD+W
Sbjct: 799 VRDSSRFHHFRDGSCSCGDYW 819



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 137/484 (28%), Positives = 239/484 (49%), Gaps = 18/484 (3%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           ++AT L        L+  + IH  +++ G    L   N L++ Y K   L  A++LF EM
Sbjct: 145 TFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEM 204

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
           P ++++SF   I GYT      EA+ LF  +     + + F F A L + V         
Sbjct: 205 PTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQ 264

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FND 221
            +     K  +  + FV  AL+D +S    ++ A+ +FD +                +N 
Sbjct: 265 QIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNG 324

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
            +E++ + F +++   F   NF FA +L        + + +  H  A+ T    ++ V  
Sbjct: 325 QYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGN 384

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           AL+D+Y K  +  +A RIF  +  ++ +PW+ +I+ Y Q     +A+++F  M +  V  
Sbjct: 385 ALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHG 444

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           +Q TF S L+A A +  + LG Q+HS V+R+GLLS VF  + L+D+YA CG M++++E+F
Sbjct: 445 DQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVF 504

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
            E P RN V WN +I  Y Q G+       F+ M+E  +    V++ SVL AC+    +E
Sbjct: 505 KEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVE 564

Query: 462 PGM-QVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR-LVFDMMNDWNEVSWNAMISG 519
             +   + +T     D        +ID+  + G   +A  L+ +M  + +EV W+++++ 
Sbjct: 565 KALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNS 624

Query: 520 YSMH 523
             +H
Sbjct: 625 CRIH 628


>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 837

 Score =  490 bits (1262), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 266/775 (34%), Positives = 419/775 (54%), Gaps = 62/775 (8%)

Query: 91  LFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEA--------- 141
           ++ TN LLN   K  ++ DA KLFD+MP+++  S+ T I  Y    + VEA         
Sbjct: 65  IYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSC 124

Query: 142 ----------------------VGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCV 179
                                   LF ++  EG + + F   + L+V  S+G  +    +
Sbjct: 125 KSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMI 184

Query: 180 FACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------------------ND 221
              V K G + N FV T L+D ++ C CV  A  +F GL                   N 
Sbjct: 185 HGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNG 244

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
              +A+ FF  M A G + N +TF  +L AC  +      +  HG  +K+ +  ++YV  
Sbjct: 245 DGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQS 304

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           AL+D+Y K G++ NA+ + E M   DV+ W+ ++  + +  L  +A+ LF  M    +  
Sbjct: 305 ALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKI 364

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           + +TF SVL  C    G      +H L+++ G  +   VSNAL+D+YAK G M+ +  +F
Sbjct: 365 DDYTFPSVLNCCVV--GSINPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVF 422

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
            +  +++ ++W +++ GY Q     +++ +F  M    V   +   +S+L ACA L  LE
Sbjct: 423 EKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLE 482

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
            G QVH   +K+       V N+L+ MYAKCG + DA  +F  M   + ++W A+I GY+
Sbjct: 483 FGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYA 542

Query: 522 MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
            +G     LK +D M   G RP+ +TF+G+L ACS+ GL+++G  YF+ M   YGI+P  
Sbjct: 543 QNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGP 602

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
           EHY  M+ L GR+G LD+A +L++ +  +P   +W++LL AC +H N+E+   +A ++ +
Sbjct: 603 EHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLFE 662

Query: 642 FEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDT 690
            EP +   +V+LSN+Y+ +R W   A            KEPG SW+E    V+ F + D 
Sbjct: 663 LEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISDDR 722

Query: 691 SHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKM 750
            H     I   ++ + ++ ++AGY+PD+S  L D+ ++ KE  L  HSEKLA+AF L   
Sbjct: 723 GHPREAEIYTKIDEIILRIKEAGYVPDMSFSLHDMDKEGKEVGLAYHSEKLAVAFGLLAA 782

Query: 751 PPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           PPS+PIRI KNLR+C DCH+A+K IS++  R II+RD + FHHF++G CSCGD+W
Sbjct: 783 PPSAPIRIFKNLRVCGDCHSAMKYISRVFTRHIILRDSNCFHHFREGECSCGDYW 837



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 135/485 (27%), Positives = 243/485 (50%), Gaps = 24/485 (4%)

Query: 60  ATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFD--EM 117
            + L+ C     +QT   IH  V+K G   ++F    L+++Y K   + +A  LF   E 
Sbjct: 166 GSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEF 225

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
             +N + +   + GY  +    +AV  F  +H +G E N + F   L    S+       
Sbjct: 226 DRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGE 285

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF-------------- 223
            V   + K G  SN +V +AL+D ++ CG ++ A+ + + + +D                
Sbjct: 286 QVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHG 345

Query: 224 --EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
             EEAL  F  M     K +++TF  VL  C+ + +I   KS HG  +KT +E    V+ 
Sbjct: 346 LEEEALRLFKNMHGRNMKIDDYTFPSVLNCCV-VGSIN-PKSVHGLIIKTGFENYKLVSN 403

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           AL+D+Y K+G++  A  +FE+M +KDVI W+ ++  YAQ +   +++++FC MR   V P
Sbjct: 404 ALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNP 463

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           +QF   S+L ACA +  L+ G Q+H   ++ GL     V N+L+ +YAKCG ++++  +F
Sbjct: 464 DQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIF 523

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
                ++ +TW  +IVGY Q G+   ++  +  M+        +T+  +L AC+    ++
Sbjct: 524 VSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVD 583

Query: 462 PGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDARLVFDMMNDWNEVS-WNAMIS 518
            G +      K  Y +     +   +ID++ + G + +A+ + D M+   + + W +++S
Sbjct: 584 EGRKYFQQMNKV-YGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLS 642

Query: 519 GYSMH 523
              +H
Sbjct: 643 ACRVH 647



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/383 (22%), Positives = 174/383 (45%), Gaps = 22/383 (5%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N +++ T L +C           +H  ++K G   +++  + L+++Y K   L +A  
Sbjct: 262 ECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKN 321

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           + + M + + +S+ + + G+       EA+ LF  +H    +++ + F + L   V    
Sbjct: 322 MLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVV--- 378

Query: 173 AELCP-CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------------ 219
             + P  V   + K G ++   V  AL+D ++  G ++ A  VF+ +             
Sbjct: 379 GSINPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVT 438

Query: 220 ----NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
               N+  EE+L  F  MR  G  P+ F  A +L AC  L  +   K  H   +K+    
Sbjct: 439 GYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRW 498

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
              V  +L+ +Y K G + +A  IF  M  KDVI W+ +I  YAQ     ++++ +  M 
Sbjct: 499 SQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMV 558

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV-GLLSDVFVSNALMDVYAKCGRM 394
            +   P+  TF+ +L AC+    +D G +    + +V G+         ++D++ + G++
Sbjct: 559 SSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKL 618

Query: 395 ENSVELFAE-SPKRNHVTWNTMI 416
           + + +L  +   K +   W +++
Sbjct: 619 DEAKQLLDQMDVKPDATVWKSLL 641



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 80/183 (43%), Gaps = 34/183 (18%)

Query: 470 TVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS----------- 518
           T  A+Y+  +   N L++  +K G + DAR +FD M   +E SWN MIS           
Sbjct: 57  TTAASYE-SIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEA 115

Query: 519 --------------------GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNG 558
                               GY   G   E   +F  M+  GW+ +  T   VL  CS+ 
Sbjct: 116 RELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSL 175

Query: 559 GLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF-QPSVMIWR 617
           GL++ GE     +V N G E  +   T +V +  +   + +A  L +G+ F + + ++W 
Sbjct: 176 GLIQTGEMIHGFVVKN-GFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWT 234

Query: 618 ALL 620
           A++
Sbjct: 235 AMV 237


>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
          Length = 948

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 273/814 (33%), Positives = 435/814 (53%), Gaps = 38/814 (4%)

Query: 22  NAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQ 81
           N+ +R L+     S      S T  I     + +++++ + + +C    D + A +IH +
Sbjct: 143 NSIIRALTHNGLFSEALSLYSETQRIRL---QPDTYTFPSVINACAGLLDFEMAKSIHDR 199

Query: 82  VLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEA 141
           VL  G   DL+  N L+++Y + N L  A K+F+EMP R+ +S+ + I GY  +  + EA
Sbjct: 200 VLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEA 259

Query: 142 VGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDA 201
           + ++      G   + +  ++ L+    +G  E    +   + K+G   +  V   L+  
Sbjct: 260 LEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSM 319

Query: 202 FSVCGCVEFARKVFDGL-FNDC---------------FEEALNFFSQMRAVGFKPNNFTF 245
           +     +   R++FD +   D                +EE++  F +M    FKP+  T 
Sbjct: 320 YCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEM-VNQFKPDLLTI 378

Query: 246 AFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPK 305
             +L+AC  L  +   K  H   + + YE D   +  L+++Y K G +  ++ +F  M  
Sbjct: 379 TSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKC 438

Query: 306 KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
           KD + W+ MI  Y Q     +A++LF +M +  V P+  T+V +L     +  L LG ++
Sbjct: 439 KDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKEL 497

Query: 366 HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEV 425
           H  + ++G  S++ VSN L+D+YAKCG M +S+++F     R+ +TWNT+I   V   + 
Sbjct: 498 HCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDC 557

Query: 426 GKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANAL 485
              + M S+M  E V     T  S+L  C+ LAA   G ++H    K   + DV V N L
Sbjct: 558 NLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVL 617

Query: 486 IDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNN 545
           I+MY+KCGS+ ++  VF +M   + V+W A+IS   M+G   + ++ F  M+  G  P++
Sbjct: 618 IEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDH 677

Query: 546 LTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
           + FV ++ ACS+ GL+E+G  YF  M  +Y IEP IEHY  +V LL R+  LDKA   I 
Sbjct: 678 VAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFIL 737

Query: 606 GIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEK 665
            +P +P   IW ALL AC +  + EI +  ++ I++  P+D   +VL+SN+YA    W++
Sbjct: 738 SMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAALGKWDQ 797

Query: 666 AAS-----------KEPGLSWIENQGMVHYFRAG---DTSHADMNIIRGMLEWLNMKSRK 711
             S           K+PG SW+E Q  V+ F  G        ++N + GML  L  K   
Sbjct: 798 VRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFSEQFEEVNKLLGMLAGLMAKE-- 855

Query: 712 AGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTA 771
            GYI +L  VL D+ EDEK   L  HSE+LA+AF L    P +P++++KNLR+C DCHT 
Sbjct: 856 -GYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTV 914

Query: 772 IKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            K ISKI QRE+++RD +RFH F+DG CSCGD+W
Sbjct: 915 TKYISKIXQRELLVRDANRFHVFKDGACSCGDYW 948



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 150/523 (28%), Positives = 262/523 (50%), Gaps = 22/523 (4%)

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
           P  N   + + I+  T +  F EA+ L+S   R   + + + F + +     +   E+  
Sbjct: 135 PSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 194

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FND 221
            +   V  +G  S+ ++G ALID +     ++ ARKVF+ +                 N 
Sbjct: 195 SIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG 254

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
            + EAL  + + R +G  P+++T + VL+AC GL ++      HG   K   + D+ V  
Sbjct: 255 YWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNN 314

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
            LL +Y K   + + RRIF++M  +D + W+ MI  Y+Q  L  ++++LF  M   F  P
Sbjct: 315 GLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQF-KP 373

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           +  T  S+LQAC  +  L+ G  +H  ++  G   D   SN L+++YAKCG +  S E+F
Sbjct: 374 DLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVF 433

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
           +    ++ V+WN+MI  Y+Q G   +AM +F KM++  V    VTY  +L     L  L 
Sbjct: 434 SGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLX 492

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
            G ++HC   K  ++ ++VV+N L+DMYAKCG + D+  VF+ M   + ++WN +I+   
Sbjct: 493 LGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIAS-C 551

Query: 522 MHGLSAEV-LKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPC 580
           +H     + L++   M+  G  P+  T + +L  CS      QG+      +   G+E  
Sbjct: 552 VHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKE-IHGCIFKLGLESD 610

Query: 581 IEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGAC 623
           +     ++ +  + G L  + ++ + +  +  V+ W AL+ AC
Sbjct: 611 VPVGNVLIEMYSKCGSLRNSFQVFKLMKTK-DVVTWTALISAC 652



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 185/351 (52%), Gaps = 5/351 (1%)

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
           P  +V  W+ +I       L  +A+ L+   ++  + P+ +TF SV+ ACA +   ++  
Sbjct: 135 PSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 194

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
            IH  V+ +G  SD+++ NAL+D+Y +   ++ + ++F E P R+ V+WN++I GY   G
Sbjct: 195 SIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG 254

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN 483
              +A+ ++ +     V     T SSVLRAC  L ++E G  +H L  K     DV+V N
Sbjct: 255 YWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNN 314

Query: 484 ALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRP 543
            L+ MY K   + D R +FD M   + VSWN MI GYS  GL  E +K+F  M  + ++P
Sbjct: 315 GLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKP 373

Query: 544 NNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKL 603
           + LT   +L AC + G LE G+     M+ + G E        ++++  + G+L  + ++
Sbjct: 374 DLLTITSILQACGHLGDLEFGKYVHDYMITS-GYECDTTASNILINMYAKCGNLLASQEV 432

Query: 604 IEGIPFQPSVMIWRALLGACIIHNNV-EIGRLSAQHILDFEPEDEATHVLL 653
             G+  + SV  W +++   I + +  E  +L      D +P D  T+V+L
Sbjct: 433 FSGMKCKDSVS-WNSMINVYIQNGSFDEAMKLFKMMKTDVKP-DSVTYVML 481



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 94/371 (25%), Positives = 172/371 (46%), Gaps = 40/371 (10%)

Query: 327 AVELFCR----MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSN 382
           + +LF R    +R       Q  F S+ +A A+       +++HSL++ +GL   V  S 
Sbjct: 52  STKLFSRVMKTLRVLHECSRQTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSA 111

Query: 383 ALMDVYAKCGRMENSVELFA-ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVP 441
            L+  YA      +S  +F   SP  N   WN++I      G   +A+ ++S+    ++ 
Sbjct: 112 KLIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQ 171

Query: 442 ATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLV 501
               T+ SV+ ACA L   E    +H   +   +  D+ + NALIDMY +   +  AR V
Sbjct: 172 PDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKV 231

Query: 502 FDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLL 561
           F+ M   + VSWN++ISGY+ +G   E L+++   +  G  P++ T   VL AC   G +
Sbjct: 232 FEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSV 291

Query: 562 EQGE---------AYFKSMVANYGI-------EPCIE--------------HYTSMVSLL 591
           E+G+            K ++ N G+          I+               + +M+   
Sbjct: 292 EEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGY 351

Query: 592 GRAGHLDKAAKLIEGI--PFQPSVMIWRALLGACIIHNNVEIGRLSAQHIL--DFEPEDE 647
            + G  +++ KL   +   F+P ++   ++L AC    ++E G+    +++   +E +  
Sbjct: 352 SQVGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTT 411

Query: 648 ATHVLLSNIYA 658
           A+++L+ N+YA
Sbjct: 412 ASNILI-NMYA 421


>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
 gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 809

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 273/776 (35%), Positives = 416/776 (53%), Gaps = 31/776 (3%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
           H  A  L+ C    +L+  + +   V K G   + F    L++++ +   + +A ++F+ 
Sbjct: 38  HPAALLLERCSSLKELRQILPL---VFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEP 94

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
           +  +  + + T ++G+   S   +A+  F  +  +  E   + FT  LKV        + 
Sbjct: 95  IDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVG 154

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FN 220
             +   + K G   + F  T L + ++ C  V  ARKVFD +                 N
Sbjct: 155 KEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQN 214

Query: 221 DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
                AL     M     KP+  T   VL A   L  I V K  HG A+++ ++  + ++
Sbjct: 215 GMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIS 274

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
            AL+D+Y K G +  AR++F+ M +++V+ W+ MI  Y Q +   +A+ +F +M    V 
Sbjct: 275 TALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVK 334

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           P   + +  L ACA +  L+ G  IH L V +GL  +V V N+L+ +Y KC  ++ +  +
Sbjct: 335 PTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASM 394

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F +   R  V+WN MI+G+ Q G    A+  FS+M    V     TY SV+ A A L+  
Sbjct: 395 FGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSIT 454

Query: 461 EPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY 520
                +H + +++  D +V V  AL+DMYAKCG+I  ARL+FDMM++ +  +WNAMI GY
Sbjct: 455 HHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGY 514

Query: 521 SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPC 580
             HG     L++F+ MQ+   +PN +TF+ V+SACS+ GL+E G   F  M  NY IE  
Sbjct: 515 GTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELS 574

Query: 581 IEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHIL 640
           ++HY +MV LLGRAG L++A   I  +P +P+V ++ A+LGAC IH NV     +A+ + 
Sbjct: 575 MDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLF 634

Query: 641 DFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGD 689
           +  P+D   HVLL+NIY  A  WEK              K PG S +E +  VH F +G 
Sbjct: 635 ELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGS 694

Query: 690 TSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFK 749
           T+H D   I   LE L    ++AGY+PD + VL  V  D KE+ L  HSEKLA++F L  
Sbjct: 695 TAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLN 753

Query: 750 MPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
               + I + KNLR+C DCH A K IS +  REI++RD+ RFHHF++G CSCGD+W
Sbjct: 754 TTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809



 Score = 40.0 bits (92), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 15/151 (9%)

Query: 38  QCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLD--LFATN 95
           Q  + T  P TF+        Y + + +  +      A  IH  V++  +CLD  +F T 
Sbjct: 428 QMRSRTVKPDTFT--------YVSVITAIAELSITHHAKWIHGVVMR--SCLDKNVFVTT 477

Query: 96  VLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHEL 155
            L+++Y K   +  A  +FD M ER+  ++   I GY        A+ LF  + +    +
Sbjct: 478 ALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKG--TI 535

Query: 156 NPFAFTAFLKVLVSMGWAELCPCVFACVYKL 186
            P   T FL V+ +   + L      C Y +
Sbjct: 536 KPNGVT-FLSVISACSHSGLVEAGLKCFYMM 565


>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 818

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 275/777 (35%), Positives = 429/777 (55%), Gaps = 34/777 (4%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLD-LFATNVLLNVYVKLNRLPDATKLFD 115
           H     L++C    +L   +     ++K G   + LF T V+ +++ K     +A ++F+
Sbjct: 48  HPSVVLLENCTSKKELYQILPF---IIKNGFYNEHLFQTKVI-SLFCKFGSNSEAARVFE 103

Query: 116 EMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAEL 175
            +  +  + +   ++GY  +S   +A+  F  +  +   L    +   L++       + 
Sbjct: 104 HVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKK 163

Query: 176 CPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF---------------- 219
              +   +   G +SN FV TA++  ++ C  ++ A K+F+ +                 
Sbjct: 164 GREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQ 223

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           N   + AL    QM+  G KP++ T   +L A   +  +R+ +S HG A ++ +E  + V
Sbjct: 224 NGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNV 283

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
             ALLD+Y K G    AR +F+ M  K V+ W+ MI   AQ   S +A   F +M     
Sbjct: 284 TNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGE 343

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
            P + T + VL ACA +  L+ G  +H L+ ++ L S+V V N+L+ +Y+KC R++ +  
Sbjct: 344 VPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAAS 403

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +F    K N VTWN MI+GY Q G V +A+ +F  M  + +     T   V+ A A  + 
Sbjct: 404 IFNNLEKTN-VTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSV 462

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
                 +H L V+A  D +V V+ AL+DMYAKCG+I  AR +FDMM + + ++WNAMI G
Sbjct: 463 NRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDG 522

Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
           Y  HG+  E L +F+ MQ+   +PN++TF+ V+SACS+ G +E+G   FKSM  +Y +EP
Sbjct: 523 YGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEP 582

Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHI 639
            ++HY++MV LLGRAG LD A   I+ +P +P + +  A+LGAC IH NVE+G  +AQ +
Sbjct: 583 TMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKL 642

Query: 640 LDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAG 688
              +P++   HVLL+NIYA    W+K A            K PG SW+E +  +H F +G
Sbjct: 643 FKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYSG 702

Query: 689 DTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALF 748
            T+H +   I   LE L  + + AGY+PD  ++  DV ED K++ L  HSE+LA+AF L 
Sbjct: 703 STNHPESKKIYAFLETLGDEIKAAGYVPDPDSI-HDVEEDVKKQLLSSHSERLAIAFGLL 761

Query: 749 KMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
              P + + I KNLR+C DCH   K IS +  REII+RD+ RFHHF++G CSCGD+W
Sbjct: 762 NTSPGTTLHIRKNLRVCGDCHDTTKYISLVTGREIIVRDLRRFHHFKNGSCSCGDYW 818


>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
 gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
          Length = 736

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 255/625 (40%), Positives = 364/625 (58%), Gaps = 45/625 (7%)

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           AL ++  M + G +PN +TF  + K+C  +      K  H   LK   E + +V  +L++
Sbjct: 112 ALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLIN 171

Query: 286 LYTKSGEISNAR-------------------------------RIFEEMPKKDVIPWSFM 314
           +Y ++GE+ NAR                                +F+E+P +DV+ W+ M
Sbjct: 172 MYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAM 231

Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA-TMEGLDLGNQIHSLVVRVG 373
           I+ YAQ+    +A+  F  MR+A V PN  T +SVL ACA +   L LGN + S +   G
Sbjct: 232 ISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRG 291

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
           L S++ + N L+D+Y KCG +E +  LF +   +N V+WN MI GY  +    +A+ +F 
Sbjct: 292 LGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFR 351

Query: 434 KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA--NALIDMYAK 491
           +M++  +   +VT+ S+L ACA+L AL+ G  VH    K    M   VA   +LIDMYAK
Sbjct: 352 RMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAK 411

Query: 492 CGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGV 551
           CG +  A+ +FD MN  +  +WNAMISG++MHG +   L +F  M   G+ P+++TFVGV
Sbjct: 412 CGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGV 471

Query: 552 LSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQP 611
           L+AC + GLL  G  YF SM+ +Y + P + HY  M+ L GRAG  D+A  L++ +  +P
Sbjct: 472 LTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKP 531

Query: 612 SVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA---- 667
              IW +LLGAC IH  +E+    A+H+ + EPE+ + +VLLSNIYA A  WE  A    
Sbjct: 532 DGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRT 591

Query: 668 -------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSA 720
                   K PG S IE   +VH F  GD  H   N I  ML+ ++M+  KAG++PD S 
Sbjct: 592 RLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEKAGFVPDTSE 651

Query: 721 VLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQ 780
           VL D+ E+ KE  L  HSEKLA+AF L    P + IRI+KNLR+C +CH+A K+ISKI  
Sbjct: 652 VLYDMDEEWKEGVLSHHSEKLAIAFGLISTKPGTTIRIMKNLRVCGNCHSATKLISKIFN 711

Query: 781 REIIIRDVHRFHHFQDGCCSCGDFW 805
           REII RD +RFHHF+DG CSC D+W
Sbjct: 712 REIIARDRNRFHHFKDGSCSCKDYW 736



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 207/427 (48%), Gaps = 38/427 (8%)

Query: 257 TIRVAKSAHGCALKTCYEMDLYVAVALLDL--YTKSGEISNARRIFEEMPKKDVIPWSFM 314
           T++  K  H   +KT      +    L++    +  G++S A  +F+ +   + + W+ M
Sbjct: 40  TLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHM 99

Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL 374
           I   + ++    A+E +  M  +   PN++TF S+ ++C  + G   G Q+H+ V+++GL
Sbjct: 100 IRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGL 159

Query: 375 LSDVFVSNALMDVYAKCGRMEN-------------------------------SVELFAE 403
             + FV  +L+++YA+ G + N                               + ELF E
Sbjct: 160 EHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDE 219

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA-SLAALEP 462
            P R+ V+WN MI GY Q G V +AM  F +M   +V     T  SVL ACA S ++L+ 
Sbjct: 220 IPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQL 279

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G  V           ++ + N LIDMY KCG + +A  +F+ + D N VSWN MI GY+ 
Sbjct: 280 GNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTH 339

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY-GIEPCI 581
                E L +F  M Q    PN++TF+ +L AC+N G L+ G+     +  N   ++  +
Sbjct: 340 MSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTV 399

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE--IGRLSAQHI 639
             +TS++ +  + G L  A ++ + +  + S+  W A++    +H + +  +G  S    
Sbjct: 400 ALWTSLIDMYAKCGDLAVAKRIFDCMNTK-SLATWNAMISGFAMHGHTDTALGLFSRMTS 458

Query: 640 LDFEPED 646
             F P+D
Sbjct: 459 EGFVPDD 465



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 138/524 (26%), Positives = 228/524 (43%), Gaps = 59/524 (11%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLN--VYVKLNRLPDATK 112
           + H   T L +C     LQT   IH Q++K G     FA + L+          L  A  
Sbjct: 27  HDHPSLTLLSNC---KTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALS 83

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           LF  +   N + +   I+G + S     A+  +  +   G E N + F +  K    +  
Sbjct: 84  LFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRG 143

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG--------------- 217
           A     V A V KLG + NAFV T+LI+ ++  G +  AR VFD                
Sbjct: 144 AHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITG 203

Query: 218 ------------LFNDC--------------------FEEALNFFSQMRAVGFKPNNFTF 245
                       LF++                      EEA+ FF +MR     PN  T 
Sbjct: 204 YASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTM 263

Query: 246 AFVLKACL-GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
             VL AC     ++++               ++ +   L+D+Y K G++  A  +FE++ 
Sbjct: 264 LSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQ 323

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
            K+V+ W+ MI  Y       +A+ LF RM Q+ + PN  TF+S+L ACA +  LDLG  
Sbjct: 324 DKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKW 383

Query: 365 IHSLVVR--VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
           +H+ V +    + + V +  +L+D+YAKCG +  +  +F     ++  TWN MI G+   
Sbjct: 384 VHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMH 443

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
           G    A+ +FS+M  E     ++T+  VL AC     L  G +     ++ +Y +   + 
Sbjct: 444 GHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQ-DYKVSPKLP 502

Query: 483 N--ALIDMYAKCGSITDAR-LVFDMMNDWNEVSWNAMISGYSMH 523
           +   +ID++ + G   +A  LV +M    +   W +++    +H
Sbjct: 503 HYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIH 546



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 106/407 (26%), Positives = 173/407 (42%), Gaps = 61/407 (14%)

Query: 50  SVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKG---------NCLDLFATN----- 95
           S +E N +++ +  +SC +         +H  VLK G         + ++++A N     
Sbjct: 122 SGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVN 181

Query: 96  -----------------VLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQF 138
                             L+  Y     L +A +LFDE+P R+ +S+   I GY  S + 
Sbjct: 182 ARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRV 241

Query: 139 VEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA-ELCPCVFACVYKLGHDSNAFVGTA 197
            EA+  F  + R     N     + L      G + +L   V + +   G  SN  +   
Sbjct: 242 EEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNG 301

Query: 198 LIDAFSVCGCVEFARKVFDGLFN----------------DCFEEALNFFSQMRAVGFKPN 241
           LID +  CG +E A  +F+ + +                 C++EAL  F +M      PN
Sbjct: 302 LIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPN 361

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV--ALLDLYTKSGEISNARRI 299
           + TF  +L AC  L  + + K  H    K    M   VA+  +L+D+Y K G+++ A+RI
Sbjct: 362 DVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRI 421

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL 359
           F+ M  K +  W+ MI+ +A    +  A+ LF RM      P+  TFV VL AC     L
Sbjct: 422 FDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLL 481

Query: 360 DLGNQIHSLVVRVGLLSDVFVSNAL------MDVYAKCGRMENSVEL 400
            LG +  S      ++ D  VS  L      +D++ + G  + +  L
Sbjct: 482 SLGRRYFS-----SMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETL 523


>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 809

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 272/776 (35%), Positives = 417/776 (53%), Gaps = 31/776 (3%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
           H  A  L+ C    +L+  + +   + K G   +      L++++ +   + +A ++F+ 
Sbjct: 38  HPAALLLERCSSLKELRHILPL---IFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEP 94

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
           + ++  + + T ++G+   S   +A+  F  +  +  E   + FT  LKV        + 
Sbjct: 95  IDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVG 154

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FN 220
             +   + K G   + F  T L + ++ C  V  ARKVFD +                 N
Sbjct: 155 KEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQN 214

Query: 221 DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
                AL   + M     KP+  T   VL A   L  IR+ K  HG A++  ++  + +A
Sbjct: 215 GMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIA 274

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
            AL+D+Y K G +  AR +F+ M +++V+ W+ MI  Y Q +   +A+ +F +M    V 
Sbjct: 275 TALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVK 334

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           P   + +  L ACA +  L+ G  IH L V + L  +V V N+L+ +Y KC  ++ +  +
Sbjct: 335 PTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASM 394

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F +   R  V+WN MI+G+ Q G   +A+  FS+M    V     TY SV+ A A L+  
Sbjct: 395 FGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSIT 454

Query: 461 EPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY 520
                +H + ++   D +V V  AL+DMYAKCG+I  ARL+FDMM++ +  +WNAMI GY
Sbjct: 455 HHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGY 514

Query: 521 SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPC 580
             HG+    L++F+ MQ+   RPN +TF+ V+SACS+ GL+E G   F  M  NY IEP 
Sbjct: 515 GTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPS 574

Query: 581 IEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHIL 640
           ++HY +MV LLGRAG L++A   I  +P +P+V ++ A+LGAC IH NV      A+ + 
Sbjct: 575 MDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLF 634

Query: 641 DFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGD 689
           +  PED   HVLL+NIY  A  WEK              K PG S +E +  VH F +G 
Sbjct: 635 ELNPEDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGS 694

Query: 690 TSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFK 749
           T+H     I   LE L  + ++AGY+PD + +L  + +D KE+ L  HSEKLA++F L  
Sbjct: 695 TAHPSSKKIYAFLEKLICQIKEAGYVPDTNLIL-GLEDDVKEQLLSSHSEKLAISFGLLN 753

Query: 750 MPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
               + I + KNLR+C DCH A K IS +  REII+RD+ RFHHF++G CSCGD+W
Sbjct: 754 TTAGTTIHVRKNLRVCADCHNATKYISLVTGREIIVRDMQRFHHFKNGACSCGDYW 809



 Score = 40.4 bits (93), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 12/139 (8%)

Query: 38  QCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLD--LFATN 95
           Q    T  P TF+        Y + + +  +      A  IH  V++  NCLD  +F T 
Sbjct: 428 QMQARTVKPDTFT--------YVSVITAIAELSITHHAKWIHGVVMR--NCLDKNVFVTT 477

Query: 96  VLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHEL 155
            L+++Y K   +  A  +FD M ER+  ++   I GY        A+ LF  + +     
Sbjct: 478 ALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRP 537

Query: 156 NPFAFTAFLKVLVSMGWAE 174
           N   F + +      G  E
Sbjct: 538 NGVTFLSVISACSHSGLVE 556


>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
 gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 257/723 (35%), Positives = 388/723 (53%), Gaps = 27/723 (3%)

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A +LF  MPE+N +S+   + GY       + + LF  +     + + F  +  LK   +
Sbjct: 4   AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF------ 223
            G       + A   + G + + F+G +L+D +S CG V  A KVF  + N         
Sbjct: 64  TGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAM 123

Query: 224 ----------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY 273
                     +EA   F  MR  G +PN FT + ++     +  +R  +S HGC  K  +
Sbjct: 124 ITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGF 183

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
           E D  V+  L+ +Y KS  + +  ++FE M   D++ W+ +++ +  +        +F +
Sbjct: 184 ESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQ 243

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           M      PN FTF+SVL++C+++   + G Q+H+ +++     D FV  AL+D+YAK   
Sbjct: 244 MLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARC 303

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           +E++   F     R+  +W  +I GY Q  +  KA+  F +M  E +   E T +S L  
Sbjct: 304 LEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSG 363

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
           C+ +A LE G Q+H + VKA +  D+ V +AL+D+Y KCG +  A  +F  +   + VSW
Sbjct: 364 CSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSW 423

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA 573
           N +ISGYS HG   + L+ F +M   G  P+  TF+GVLSACS  GL+E+G+  F SM  
Sbjct: 424 NTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSK 483

Query: 574 NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGR 633
            YGI P IEHY  MV +LGRAG  ++    IE +   P  +IW  +LGAC +H NV+ G 
Sbjct: 484 IYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFGE 543

Query: 634 LSAQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMV 682
            +A+ + + EP  +++++LLSNI+A    W+           +   KEPG SW+E  G V
Sbjct: 544 KAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEVDGQV 603

Query: 683 HYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLA 742
           H F + D SH  +  I   L+ L       GY+P    VL +V   EK  +L+ HSE+LA
Sbjct: 604 HVFLSQDGSHPKIREIYAKLDKLGQSLMSIGYVPKTEVVLHNVSNKEKMEHLYYHSERLA 663

Query: 743 LAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCG 802
           L+FAL       PIRI KNLRIC DCH  +K+IS I  +EI++RD+ RFHHF+ G CSC 
Sbjct: 664 LSFALLSTNAVKPIRIFKNLRICEDCHDFMKLISDITNQEIVVRDIRRFHHFKRGTCSCQ 723

Query: 803 DFW 805
           D W
Sbjct: 724 DRW 726



 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 140/492 (28%), Positives = 241/492 (48%), Gaps = 20/492 (4%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           ++F+  + +T L+ C     L+    +H   L+ G  +D F    L+++Y K   + DA 
Sbjct: 47  TKFSKFTLSTVLKGCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDAL 106

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
           K+F ++   + +++   I G        EA  LF  + R+G   N F  ++ +    +MG
Sbjct: 107 KVFTKIRNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMG 166

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN----------- 220
                  +  C+ K G +S+  V   LI  +    CVE   KVF+ + N           
Sbjct: 167 DLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLS 226

Query: 221 -----DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
                         F QM   GFKPN FTF  VL++C  L      K  H   +K   + 
Sbjct: 227 GFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDD 286

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
           D +V  AL+D+Y K+  + +A   F+ +  +D+  W+ +I+ YAQTD +  AV+ F +M+
Sbjct: 287 DDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQ 346

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
           +  + PN++T  S L  C+ M  L+ G Q+H++ V+ G   D+FV +AL+D+Y KCG ME
Sbjct: 347 REGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCME 406

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
           ++  +F     R+ V+WNT+I GY Q G+  KA+  F  ML E +   E T+  VL AC+
Sbjct: 407 HAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACS 466

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDARLVFDMMN-DWNEVS 512
            +  +E G +    ++   Y ++  + +   ++D+  + G   + ++  + MN     + 
Sbjct: 467 FMGLVEEGKK-RFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLI 525

Query: 513 WNAMISGYSMHG 524
           W  ++    +HG
Sbjct: 526 WETVLGACKLHG 537



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 128/229 (55%), Gaps = 2/229 (0%)

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           ME +  LF   P++N V+WN ++ GY QLG+  K + +F KM E +   ++ T S+VL+ 
Sbjct: 1   MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
           CA+  +L  G  +H L +++  ++D  +  +L+DMY+KCG++ DA  VF  + + + V+W
Sbjct: 61  CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA 573
           +AMI+G    G   E  ++F LM+++G RPN  T   ++S  +N G L  G++     + 
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQS-IHGCIC 179

Query: 574 NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
            YG E        ++ +  ++  ++   K+ E +   P ++ W ALL  
Sbjct: 180 KYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMT-NPDLVSWNALLSG 227


>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 874

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 303/838 (36%), Positives = 439/838 (52%), Gaps = 71/838 (8%)

Query: 24  WLRGLSAQAALST--QQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQ 81
           W+  L +Q   S+   Q  ++ T  +T  V   N  ++   L++     DL     +H  
Sbjct: 52  WVSHLRSQTQSSSTFHQAISTYTNMVTAGVPPDN-FAFPAVLKATAGIQDLNLGKQLHAH 110

Query: 82  VLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEA 141
           V K G  L     N L+N+Y K   +  A ++FDE+  R+ +S+ + I       ++  A
Sbjct: 111 VFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELA 170

Query: 142 VGLFSTLHREGHELNPFAFTAFLKVLVSMGWA--------ELCPCVFACVYKLGHDSNAF 193
           V LF  +  E   + P +FT     LVS+  A         L   V A V + G D   F
Sbjct: 171 VHLFRLMLLE--NVGPTSFT-----LVSVAHACSNLINGLLLGKQVHAFVLRNG-DWRTF 222

Query: 194 VGTALIDAFSVCGCVEFARKVFDGLF-----------------NDCFEEALNFFSQMRAV 236
              AL+  ++  G V  A+ +FD +F                 ND FEEAL +   M   
Sbjct: 223 TNNALVTMYAKLGRVYEAKTLFD-VFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQS 281

Query: 237 GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD-LYVAVALLDLYTKSGEISN 295
           G +PN  T A VL AC  L+ +   K  H   L     ++  +V  AL+D+Y    +   
Sbjct: 282 GVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEK 341

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR-QAFVAPNQFTFVSVLQACA 354
            R +F+ M ++ +  W+ MIA Y + +   +A+ELF  M  +  ++PN  T  SVL AC 
Sbjct: 342 GRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACV 401

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
             E       IHS VV+ G   D +V NALMD+Y++ GR+E +  +F    +++ V+WNT
Sbjct: 402 RCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNT 461

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQ------------------VPATEVTYSSVLRACAS 456
           MI GYV  G    A+ +   M   Q                  +    VT  +VL  CA+
Sbjct: 462 MITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAA 521

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           LAAL  G ++H   VK     DV V +AL+DMYAKCG +  +R VF+ M+  N ++WN +
Sbjct: 522 LAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVL 581

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRG-----WRPNNLTFVGVLSACSNGGLLEQGEAYFKSM 571
           I  Y MHG   E LK+F  M + G      RPN +T++ + ++ S+ G++++G   F +M
Sbjct: 582 IMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTM 641

Query: 572 VANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQ-PSVMIWRALLGACIIHNNVE 630
            A +GIEP  +HY  +V LLGR+G +++A  LI+ +P     V  W +LLGAC IH N+E
Sbjct: 642 KAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLE 701

Query: 631 IGRLSAQHILDFEPE--DEATHVLLSNIYAMARSW-EKAASKEPGLSWIENQGMVHYFRA 687
           IG ++A+++   +P   D  T   +     + R   EK   KEPG SWIE+   VH F A
Sbjct: 702 IGEIAAKNLFVLDPNVLDYGTKQSM-----LGRKMKEKGVRKEPGCSWIEHGDEVHKFLA 756

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFAL 747
           GD SH     +   LE L+++ +K GY+PD S VL +V E+EKE  L  HSE+LA+AF L
Sbjct: 757 GDVSHPQSKEVHEYLETLSLRMKKEGYVPDTSCVLHNVGEEEKETMLCGHSERLAIAFGL 816

Query: 748 FKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
               P + IR+ KNLR+C DCH A K ISKIV REII+RDV RFHHF++G CSCGD+W
Sbjct: 817 LNTSPGTTIRVAKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 874


>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
 gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
          Length = 704

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 266/704 (37%), Positives = 392/704 (55%), Gaps = 28/704 (3%)

Query: 129 IQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGH 188
           ++GY  SS    A+  FS +  +      + FT  LK+       +    +   V   G 
Sbjct: 2   LKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSGF 61

Query: 189 DSNAFVGTALIDAFSVCGCVEFARKVFD---------------GLFNDCFEE-ALNFFSQ 232
             N F  T +++ ++ C  +  A  +FD               G   + F + AL    +
Sbjct: 62  SWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLR 121

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           M   G +P++ T   +L A      +R+  + HG  L+  +E  + V+ AL+D+Y+K G 
Sbjct: 122 MSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGS 181

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           +S AR IF+ M  + V+ W+ MI  Y Q+  +  A+ +F +M    V P   T +  L A
Sbjct: 182 VSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHA 241

Query: 353 CATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTW 412
           CA +  L+ G  +H LV ++ L SDV V N+L+ +Y+KC R++ + ++F     +  V+W
Sbjct: 242 CADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSW 301

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
           N MI+GY Q G V +A+  F +M    +     T  SV+ A A L+       +H L ++
Sbjct: 302 NAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIR 361

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
              D +V V  AL+DMYAKCG+I  AR +FDMMN  + ++WNAMI GY  HGL    +++
Sbjct: 362 RFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVEL 421

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
           F  M++   +PN++TF+  LSACS+ GL+E+G  +F+SM  +YGIEP ++HY +MV LLG
Sbjct: 422 FKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLG 481

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVL 652
           RAG L++A   I+ +P +P + ++ A+LGAC IH NV++G  +A  I    P+D   HVL
Sbjct: 482 RAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGYHVL 541

Query: 653 LSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGM 701
           L+NIYA A  W K A            K PG S +E    VH F +G TSH     I   
Sbjct: 542 LANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQSKKIYSY 601

Query: 702 LEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKN 761
           LE L  + R AGY+PD +++  DV +D K + L  HSEKLA+AF L      +PI I KN
Sbjct: 602 LETLVDEIRAAGYVPDTNSI-HDVEDDVKVQLLNTHSEKLAIAFGLLNTSTGTPIHIRKN 660

Query: 762 LRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           LR+C DCH A K IS +  REII+RD+HRFH F+DG CSCGD+W
Sbjct: 661 LRVCGDCHNATKYISLVTGREIIVRDMHRFHLFKDGVCSCGDYW 704



 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 222/462 (48%), Gaps = 23/462 (4%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
           +++   L+ C  N DL+    IH  V+  G   +LFA   ++N+Y K  ++ DA  +FD 
Sbjct: 31  YNFTYLLKLCGDNSDLKRGKEIHGSVITSGFSWNLFAMTGVVNMYAKCRQINDAYNMFDR 90

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
           MPER+ + + T I GY  +     A+ L   +  EGH  +     + L  +       + 
Sbjct: 91  MPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIG 150

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF------------- 223
             V   V + G +S   V TAL+D +S CG V  AR +FDG+ +                
Sbjct: 151 MAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQS 210

Query: 224 ---EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
              E A+  F +M   G +P N T    L AC  L  +   K  H    +   + D+ V 
Sbjct: 211 GDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVM 270

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
            +L+ +Y+K   +  A  IF+ +  K ++ W+ MI  YAQ     +A+  FC M+   + 
Sbjct: 271 NSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIK 330

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           P+ FT VSV+ A A +        IH LV+R  L  +VFV  AL+D+YAKCG +  + +L
Sbjct: 331 PDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKL 390

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F     R+ +TWN MI GY   G    ++ +F +M +  +   ++T+   L AC+    +
Sbjct: 391 FDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLV 450

Query: 461 EPGMQVHCL--TVKANYDMDVVVAN--ALIDMYAKCGSITDA 498
           E G+   C   ++K +Y ++  + +  A++D+  + G +  A
Sbjct: 451 EEGL---CFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQA 489



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 168/307 (54%), Gaps = 2/307 (0%)

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
           M+  YA++     A+  F RM+   V P  + F  +L+ C     L  G +IH  V+  G
Sbjct: 1   MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
              ++F    ++++YAKC ++ ++  +F   P+R+ V WNTMI GY Q G    A+++  
Sbjct: 61  FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120

Query: 434 KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCG 493
           +M EE      +T  S+L A A    L  GM VH   ++A ++  V V+ AL+DMY+KCG
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180

Query: 494 SITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLS 553
           S++ AR++FD M+    VSWN+MI GY   G +   + +F  M   G +P N+T +G L 
Sbjct: 181 SVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALH 240

Query: 554 ACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSV 613
           AC++ G LE+G+ +   +V    ++  +    S++S+  +   +D AA + + +    ++
Sbjct: 241 ACADLGDLERGK-FVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLR-NKTL 298

Query: 614 MIWRALL 620
           + W A++
Sbjct: 299 VSWNAMI 305


>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
 gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 251/602 (41%), Positives = 365/602 (60%), Gaps = 21/602 (3%)

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           E+L  FS MR +  KPN  TF   +K+C  L  +   K AH  AL   +E DL+V+ AL+
Sbjct: 65  ESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAHQQALVFGFESDLFVSSALI 124

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM---------R 335
           D+Y+K G++SNAR +F+E+P+++++ W+ +I  Y Q D + +A+ +F             
Sbjct: 125 DMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGE 184

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
           +   + +    +SVL AC+ +    +   +H + ++VGL   + V N L+D YAKCG + 
Sbjct: 185 EVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVS 244

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPA-TEVTYSSVLRAC 454
            S ++F +  +++ V+WN+MI  Y Q G    A  +F  ML+       EVT S++L AC
Sbjct: 245 LSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLAC 304

Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
           A   AL  GM +H   +K  Y  +V++A ++IDMY KCG    AR  FD M + N  SW 
Sbjct: 305 AHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWT 364

Query: 515 AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
           AMI+GY MHG + E L VF  M   G +PN +TF+ VL+ACS+ G LE+G  +F +M   
Sbjct: 365 AMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHE 424

Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL 634
           Y +EP +EHY  MV LLGRAG++ +A  LI+ +  +   ++W +LL AC IH +VE+  +
Sbjct: 425 YNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEI 484

Query: 635 SAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVH 683
           SA+ +   +P +   +VLL+NIYA A  W           ++   K PG S +E +G VH
Sbjct: 485 SARELFKLDPSNCGYYVLLANIYADAGRWKDVERMRILVKDRGLVKPPGYSLVELKGRVH 544

Query: 684 YFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLAL 743
            F  GD  H     I   LE L++K ++AGY+P++++VL DV E+EKE  + VHSEKLA+
Sbjct: 545 VFLVGDKEHPQHEKIYKYLEELSVKLQEAGYVPNMASVLHDVDEEEKEMIVRVHSEKLAV 604

Query: 744 AFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGD 803
           AF +    P S I +IKNLR+C DCHT IK+ISKIV REII+RD  RFHHF+DG CSCGD
Sbjct: 605 AFGVMNSIPGSTIHVIKNLRVCGDCHTVIKLISKIVSREIIVRDAKRFHHFKDGLCSCGD 664

Query: 804 FW 805
           +W
Sbjct: 665 YW 666



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/333 (32%), Positives = 181/333 (54%), Gaps = 12/333 (3%)

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
           + DV  W+ +IA  A+   S +++  F  MR+  + PN+ TF   +++C+ +  L+ G Q
Sbjct: 44  RTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQ 103

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
            H   +  G  SD+FVS+AL+D+Y+KCG++ N+  LF E P+RN VTW ++I GYVQ  +
Sbjct: 104 AHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDD 163

Query: 425 VGKAMIMFSKMLEEQ---------VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY 475
             +A+++F + L E+              V   SVL AC+ ++       VH + +K   
Sbjct: 164 AHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGL 223

Query: 476 DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVF-D 534
           D  + V N L+D YAKCG ++ +R VFD M + + VSWN+MI+ Y+ +GLS +  +VF  
Sbjct: 224 DKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHG 283

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
           +++  G + N +T   +L AC++ G L  G       V   G    +   TS++ +  + 
Sbjct: 284 MLKAGGGKYNEVTLSTLLLACAHEGALRVGMC-LHDQVIKMGYVNNVIMATSIIDMYCKC 342

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
           G  + A    +G+  + +V  W A++    +H 
Sbjct: 343 GQAEMARNAFDGMK-EKNVRSWTAMIAGYGMHG 374



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 182/393 (46%), Gaps = 34/393 (8%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  ++  +++SC    DL +    H Q L  G   DLF ++ L+++Y K  +L +A  LF
Sbjct: 81  NRSTFPCAIKSCSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLF 140

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHRE---------GHELNPFAFTAFLK 165
           DE+P RN +++ + I GY  +    EA+ +F     E         G  ++  A  + L 
Sbjct: 141 DEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLS 200

Query: 166 VLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--------- 216
               +    +   V     K+G D    V   L+DA++ CG V  +RKVFD         
Sbjct: 201 ACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVS 260

Query: 217 -----------GLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAH 265
                      GL  D FE    F   ++A G K N  T + +L AC     +RV    H
Sbjct: 261 WNSMIAVYAQNGLSTDAFEV---FHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLH 317

Query: 266 GCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSI 325
              +K  Y  ++ +A +++D+Y K G+   AR  F+ M +K+V  W+ MIA Y     + 
Sbjct: 318 DQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAR 377

Query: 326 DAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNAL 384
           +A+++F +M  A V PN  TF+SVL AC+    L+ G    +++     +   V     +
Sbjct: 378 EALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCM 437

Query: 385 MDVYAKCGRMENSVELFAE-SPKRNHVTWNTMI 416
           +D+  + G ++ +  L      +R+ V W +++
Sbjct: 438 VDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLL 470



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 56/123 (45%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
            ++N  + +T L +C     L+  M +H QV+K G   ++     ++++Y K  +   A 
Sbjct: 290 GKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMAR 349

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
             FD M E+N  S+   I GY +     EA+ +F  +   G + N   F + L      G
Sbjct: 350 NAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAG 409

Query: 172 WAE 174
           + E
Sbjct: 410 FLE 412


>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
 gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
          Length = 816

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 273/772 (35%), Positives = 416/772 (53%), Gaps = 49/772 (6%)

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
           +  A  +H  ++  G    +F +  L+N Y  L  +P A   FD++  ++  ++ + I  
Sbjct: 56  VHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISA 115

Query: 132 YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLK--------VLVSMGWAELCPCVFACV 183
           Y     F  AV  F          N F  T+FL+        V+ + G  +    V   V
Sbjct: 116 YARIGHFHAAVDCF----------NEFLSTSFLQSDHYTFPPVIRACGNLDDGRKVHCLV 165

Query: 184 YKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEAL 227
            KLG + + ++  + I  +S  G V  A  +FD +                 N    EAL
Sbjct: 166 LKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEAL 225

Query: 228 NFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLY 287
             F +MR      ++ T + +L  C+ LD I      H  A+K   E DL+V  AL+++Y
Sbjct: 226 EVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMY 285

Query: 288 TKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFV 347
            K GE+ +A  IF +M  +D++ W+ ++A + Q    + A+ ++ +M    V P+  T V
Sbjct: 286 AKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLV 345

Query: 348 SVLQACATMEGLDLGNQIHSLVVR-VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
           S+    A +        IH  V R    L D+ + NA++D+YAK G ++++ ++F   P 
Sbjct: 346 SLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPV 405

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKM--LEEQVPATEVTYSSVLRACASLAALEPGM 464
           ++ ++WN++I GY Q G   +A+ ++S M      VP  + T+ S+L A + L AL+ GM
Sbjct: 406 KDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVP-NQGTWVSILTAHSQLGALKQGM 464

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
           + H   +K     D+ V+  L+DMY KCG + DA  +F  +   + VSWNA+IS + +HG
Sbjct: 465 KAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHG 524

Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY 584
              + +K+F  MQ  G +P+++TFV +LSACS+ GL+++G+  F+ M   YGI P ++HY
Sbjct: 525 YGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHY 584

Query: 585 TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEP 644
             MV L GRAGHL+KA   ++ +P +P V +W ALLGAC IH NVE+ R  + H+L  E 
Sbjct: 585 GCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVES 644

Query: 645 EDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHA 693
           E+   +VLLSNIYA    WE           +   K PG S IE    +  F  G+ +H 
Sbjct: 645 ENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSIEVDKKIDVFYTGNQTHP 704

Query: 694 DMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPS 753
               I   L  L  K +  GY+PD + VL+DV +DEKE  L  HSE+LA+AF +   PP 
Sbjct: 705 KCEEIYSELRNLTAKMKSIGYVPDYNFVLQDVEDDEKENILTSHSERLAMAFGIISTPPK 764

Query: 754 SPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           + ++I KNLR+C DCH A K ISKI +REII+RD +RFHHF+DG CSCGD+W
Sbjct: 765 TTLQIFKNLRVCGDCHNATKFISKITEREIIVRDSNRFHHFKDGVCSCGDYW 816



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 140/531 (26%), Positives = 266/531 (50%), Gaps = 35/531 (6%)

Query: 16  THQSKINAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTA 75
           T  S I+A+ R     AA+    C N     ++ S  + + +++   +++C   DD    
Sbjct: 108 TWNSMISAYARIGHFHAAV---DCFNEF---LSTSFLQSDHYTFPPVIRACGNLDD---G 158

Query: 76  MTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVS 135
             +HC VLK G   D++     ++ Y +   +  A  LFD M  R+  ++   I G+ ++
Sbjct: 159 RKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLN 218

Query: 136 SQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVY--KLGHDSNAF 193
            +  EA+ +F  +  +   ++    ++ L + V +   ++   V   VY  KLG + + F
Sbjct: 219 GKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLD--DIISGVLIHVYAIKLGLEFDLF 276

Query: 194 VGTALIDAFSVCGCVEFARKVFDGL-------FND---CFEE------ALNFFSQMRAVG 237
           V  ALI+ ++  G +  A  +F+ +       +N     FE+      AL  +++M ++G
Sbjct: 277 VCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIG 336

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM-DLYVAVALLDLYTKSGEISNA 296
             P+  T   +      L     ++S HG   + C+ + D+ +  A++D+Y K G I +A
Sbjct: 337 VVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSA 396

Query: 297 RRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR-QAFVAPNQFTFVSVLQACAT 355
           R++FE +P KDVI W+ +I  Y+Q  L+ +A++++  MR  +   PNQ T+VS+L A + 
Sbjct: 397 RKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQ 456

Query: 356 MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTM 415
           +  L  G + H  +++  L  D+FVS  L+D+Y KCG++ +++ LF E P ++ V+WN +
Sbjct: 457 LGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAI 516

Query: 416 IVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY 475
           I  +   G   KA+ +F +M  E V    +T+ S+L AC+    ++ G     L ++  Y
Sbjct: 517 ISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQL-MQETY 575

Query: 476 DMDVVVAN--ALIDMYAKCGSITDARLVFDMMNDWNEVS-WNAMISGYSMH 523
            +   + +   ++D++ + G +  A      M    +VS W A++    +H
Sbjct: 576 GIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIH 626


>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
          Length = 822

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 278/786 (35%), Positives = 434/786 (55%), Gaps = 77/786 (9%)

Query: 71  DLQTAMTIHCQVLKKGNCLDLFA--TNVLLNVYVKLNRLPDATKLFDEMPE-RNTISFVT 127
           DL+    +H ++L+ G+ LD  A   N LL +Y +   +  A  +FD M   R+ +S+  
Sbjct: 63  DLRLGRALHRRLLR-GDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTA 121

Query: 128 TIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC----- 182
                  +     ++ L   +   G  L P A+T             LC    AC     
Sbjct: 122 MASCLARNGAERGSLLLIGEMLESG--LLPNAYT-------------LCAAAHACFPHEL 166

Query: 183 -----------VYKLGH-DSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------- 219
                      V+K+G   ++  VG+ALID  +  G +  ARKVFDGL            
Sbjct: 167 YCLVGGVVLGLVHKMGLWGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLI 226

Query: 220 -----NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
                 +C EEA+  F      GF+P+ +T + ++ AC  L ++R+    H  AL+    
Sbjct: 227 SRYVQGECAEEAVELFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLA 286

Query: 275 MDLYVAVALLDLYTKSG---EISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAV-EL 330
            D  V+  L+D+Y KS     +  A ++FE MPK DVI W+ +I+ Y Q+ +  + V  L
Sbjct: 287 SDACVSCGLVDMYAKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMAL 346

Query: 331 FCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAK 390
           F  M    + PN  T+ S+L++CA++   D G Q+H+ V++    S   V NAL+ +YA+
Sbjct: 347 FGEMLNESIKPNHITYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAE 406

Query: 391 CGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
            G ME +  +F      N +   +MI    +    G+   +  +++   V  +  T++S+
Sbjct: 407 SGCMEEARRVF------NQLYERSMIPCITE----GRDFPLDHRIVRMDVGISSSTFASL 456

Query: 451 LRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE 510
           + A AS+  L  G Q+H +++KA +  D  V+N+L+ MY++CG + DA   F+ + D N 
Sbjct: 457 ISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNV 516

Query: 511 VSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKS 570
           +SW +MISG + HG +   L +F  M   G +PN++T++ VLSACS+ GL+ +G+ YF+S
Sbjct: 517 ISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRS 576

Query: 571 MVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
           M  ++G+ P +EHY  MV LL R+G + +A + I  +P +   ++W+ LLGAC  H+N+E
Sbjct: 577 MQRDHGLIPRMEHYACMVDLLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIE 636

Query: 631 IGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQ 679
           +G ++A+++++ EP D A +VLLSN+YA A  W++ A           +KE GLSW+E +
Sbjct: 637 VGEITAKNVVELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVE 696

Query: 680 GMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSE 739
              H FRAGDTSH     I G L+ L  + +  GY+PD S VL D+ ++ KE+YL  HSE
Sbjct: 697 NTTHEFRAGDTSHPRAQDIYGKLDTLVRQIKGMGYVPDTSIVLHDMSDELKEQYLLQHSE 756

Query: 740 KLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCC 799
           K+A+AF L       PIRI KNLR+C DCH+AIK +SK  +REII+RD +RFH  +DG C
Sbjct: 757 KIAVAFGLITTSAPKPIRIFKNLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGEC 816

Query: 800 SCGDFW 805
           SCG++W
Sbjct: 817 SCGEYW 822


>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Vitis vinifera]
          Length = 751

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 262/641 (40%), Positives = 383/641 (59%), Gaps = 30/641 (4%)

Query: 194 VGTALIDAFSVCGCVEFARKVFDG----------------LFNDCFEEALNFFSQMRAVG 237
           +G  LIDA+  CG V +ARKVFD                 + N   +EA++ + +M   G
Sbjct: 112 LGNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDG 171

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM-DLYVAVALLDLYTKSGEISNA 296
             P+ FTF+ V KA   L  +   + AHG ++     + +++V  AL+D+Y K G++ +A
Sbjct: 172 ILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDA 231

Query: 297 RRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM 356
           R + +++  KDV+ ++ +I  Y+      +++++F  M +  +  N++T  SVL  C  +
Sbjct: 232 RLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNL 291

Query: 357 EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMI 416
           E L  G  IH L+V+ GL S V    +L+ +Y +CG +++S+++F +    N VTW ++I
Sbjct: 292 EDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVI 351

Query: 417 VGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD 476
           VG VQ G    A++ F +ML   +     T SSVLRAC+SLA LE G Q+H + +K   D
Sbjct: 352 VGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLD 411

Query: 477 MDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLM 536
           +D  V  ALID Y KCGS   AR VF+ + + + VS N+MI  Y+ +G   E L++F  M
Sbjct: 412 IDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGM 471

Query: 537 QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGH 596
           +  G  PNN+T++GVLSAC+N GLLE+G   F S   +  IE   +HY  MV LLGRAG 
Sbjct: 472 KDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGR 531

Query: 597 LDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNI 656
           L +A  LI  +     V+IWR LL AC IH +VE+ +     ++D  PED  THVLLSN+
Sbjct: 532 LKEAEMLINQVNI-SDVVIWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNL 590

Query: 657 YAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWL 705
           YA   +W K              K P +SW++ +  +H F AGD SH +   IR  LE L
Sbjct: 591 YASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEEL 650

Query: 706 NMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMP-PSSPIRIIKNLRI 764
             K ++ GY+PD   VL+D+ E++K R L+ HSEKLA+AFAL++    ++ IRI+KNLR+
Sbjct: 651 IEKVKELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSNYKNTTIRILKNLRV 710

Query: 765 CVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           C DCHT +K +SKIV R+II RDV RFHHF++G CSCGD+W
Sbjct: 711 CGDCHTWMKFVSKIVGRDIIARDVKRFHHFRNGLCSCGDYW 751



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 135/504 (26%), Positives = 242/504 (48%), Gaps = 24/504 (4%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           Y++ +Q CI    +     I    LK+G    L   N L++ Y+K   +  A K+FDE+P
Sbjct: 80  YSSLIQQCIGIKSITDITKIQSHALKRGFHHSL--GNKLIDAYLKCGSVVYARKVFDEVP 137

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
            R+ +++ + I  Y  + +  EA+ ++  +  +G   + F F++  K    +G       
Sbjct: 138 HRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQR 197

Query: 179 VFACVYKLGHD-SNAFVGTALIDAFSVCGCVEFARKVFDG-------LFNDCF------- 223
                  LG   SN FVG+AL+D ++  G +  AR V D        LF           
Sbjct: 198 AHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHG 257

Query: 224 --EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
              E+L  F  M   G + N +T + VL  C  L+ +   +  HG  +K   E  +    
Sbjct: 258 EDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQT 317

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           +LL +Y + G + ++ ++F++    + + W+ +I    Q      A+  F +M ++ + P
Sbjct: 318 SLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITP 377

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           N FT  SVL+AC+++  L+ G QIH++V++ GL  D +V  AL+D Y KCG  E +  +F
Sbjct: 378 NSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVF 437

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
               + + V+ N+MI  Y Q G   +A+ +FS M +  +    VT+  VL AC +   LE
Sbjct: 438 NGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLE 497

Query: 462 PGMQVHCLTVKA-NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY 520
            G  +      + N ++       ++D+  + G + +A ++ + +N  + V W  ++S  
Sbjct: 498 EGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSAC 557

Query: 521 SMHG---LSAEVL-KVFDLMQQRG 540
            +HG   ++  V+ +V DL  + G
Sbjct: 558 RIHGDVEMAKRVMNRVIDLAPEDG 581



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 126/287 (43%), Gaps = 29/287 (10%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N ++ ++ L  C   +DL +   IH  ++K G    + +   LL +Y +   + D+ K
Sbjct: 275 EANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLK 334

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +F +    N +++ + I G   + +   A+  F  + R     N F  ++ L+   S+  
Sbjct: 335 VFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAM 394

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------------- 219
            E    + A V K G D + +VG ALID +  CG  E AR VF+GL              
Sbjct: 395 LEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYS 454

Query: 220 ---NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKAC-------LGLDTIRVAKSAHGCAL 269
              N    EAL  FS M+  G +PNN T+  VL AC        G      A+++    L
Sbjct: 455 YAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIEL 514

Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIA 316
                 D Y    ++DL  ++G +  A  +  ++   DV+ W  +++
Sbjct: 515 TK----DHY--ACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLS 555


>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
          Length = 869

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 280/801 (34%), Positives = 423/801 (52%), Gaps = 83/801 (10%)

Query: 77  TIHCQVLKKGNCLDLFA---TNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYT 133
           +IH   L++ + L  F     N LL  Y +   L  A  LF+ MP R+ ++F + I    
Sbjct: 80  SIHGAALRR-DLLHGFTPAVANALLTAYARCGDLTAALALFNAMPSRDAVTFNSLIAALC 138

Query: 134 VSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAF 193
           +  +++ A+     +  EGH L+ F   + L          L     A   +LG +++AF
Sbjct: 139 LFRRWLPALDALRDMLLEGHPLSSFTLVSVL----------LACSHLAEDLRLGREAHAF 188

Query: 194 V-------------GTALIDAFSVCGCVEFARKVFDGL------------FNDCFE---- 224
                           AL+  ++  G V+ A+ +F  +            +N        
Sbjct: 189 ALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQ 248

Query: 225 -----EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC-YEMDLY 278
                EA+     M A G +P+  TFA  L AC  L+ + + +  H   LK      + +
Sbjct: 249 SGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLKDSDLAANSF 308

Query: 279 VAVALLDLYTKSGEISNARRIFEEMP--KKDVIPWSFMIARYAQTDLSIDAVELFCRMR- 335
           VA AL+D+Y     +  ARR+F+ +P   + +  W+ M+  YAQ  +  +A+ELF RM  
Sbjct: 309 VASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEA 368

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
           +A V P++ T   VL ACA  E       +H  V++ G+  + FV NALMD+YA+ G ME
Sbjct: 369 EAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDME 428

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML------------------E 437
            +  +FA    R+ V+WNT+I G V  G +  A  +  +M                   E
Sbjct: 429 AARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDE 488

Query: 438 EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITD 497
           E V    VT  ++L  CA LAA   G ++H   ++   D D+ V +AL+DMYAKCG +  
Sbjct: 489 EPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLAL 548

Query: 498 ARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLM-QQRGWRPNNLTFVGVLSACS 556
           +R VFD +   N ++WN +I  Y MHGL  E + +FD M      +PN +TF+  L+ACS
Sbjct: 549 SRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACS 608

Query: 557 NGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGI-PFQPSVMI 615
           + G++++G   F SM  N+G++P  + +   V +LGRAG LD+A  +I  + P +  V  
Sbjct: 609 HSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDILGRAGRLDEAYSIITSMEPGEQQVSA 668

Query: 616 WRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-------- 667
           W + LGAC +H NV +G ++A+ +   EP++ + +VLL NIY+ A  WEK++        
Sbjct: 669 WSSFLGACRLHRNVPLGEIAAERLFQLEPDEASHYVLLCNIYSAAGLWEKSSEVRNRMRQ 728

Query: 668 ---SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRD 724
              SKEPG SWIE  G++H F AG+++H +  ++   ++ L  + R  GY PD S+VL D
Sbjct: 729 RGVSKEPGCSWIELDGVIHRFMAGESAHPESTLVHAHMDALWERMRNQGYTPDTSSVLHD 788

Query: 725 VREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREII 784
           + E EK   L  HSEKLA+AF L + PP + IR+ KNLR+C DCH A K IS++V REI+
Sbjct: 789 IEESEKAAILRYHSEKLAIAFGLLRTPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIV 848

Query: 785 IRDVHRFHHFQDGCCSCGDFW 805
           +RDV RFHHF DG CSCGD+W
Sbjct: 849 LRDVRRFHHFVDGACSCGDYW 869



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 204/406 (50%), Gaps = 22/406 (5%)

Query: 241 NNFTFAFVLKACLGLDTIRVAKSAHGCALKT--CYEMDLYVAVALLDLYTKSGEISNARR 298
           ++F      K+   L ++   +S HG AL+    +     VA ALL  Y + G+++ A  
Sbjct: 58  DHFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALA 117

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM-E 357
           +F  MP +D + ++ +IA        + A++    M       + FT VSVL AC+ + E
Sbjct: 118 LFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAE 177

Query: 358 GLDLGNQIHSLVVRVGLL--SDVFVSNALMDVYAKCGRMENSVELFA-----ESPKRNHV 410
            L LG + H+  ++ G L   + F  NAL+ +YA+ G ++++  LF      +SP    V
Sbjct: 178 DLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVV 237

Query: 411 TWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLT 470
           TWNTM+   VQ G  G+A+ +   M+   V    +T++S L AC+ L  L  G ++H   
Sbjct: 238 TWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYV 297

Query: 471 VK-ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEV--SWNAMISGYSMHGLSA 527
           +K ++   +  VA+AL+DMYA    +  AR VFDM+   +     WNAM+ GY+  G+  
Sbjct: 298 LKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDE 357

Query: 528 EVLKVFDLMQ-QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI--EPCIEHY 584
           E L++F  M+ + G  P+  T  GVL AC+        EA     V   G+   P +++ 
Sbjct: 358 EALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEA-VHGYVLKRGMADNPFVQN- 415

Query: 585 TSMVSLLGRAGHLDKAAKLIEGIPFQP-SVMIWRALLGACIIHNNV 629
            +++ L  R G ++ A  +   I  +P  V+ W  L+  C++  ++
Sbjct: 416 -ALMDLYARLGDMEAARWIFAAI--EPRDVVSWNTLITGCVVQGHI 458



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 106/417 (25%), Positives = 184/417 (44%), Gaps = 51/417 (12%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGN-CLDLFATNVLLNVYVKLNRLPDATKLFDE 116
           ++A++L +C Q + L     +H  VLK  +   + F  + L+++Y    R+  A ++FD 
Sbjct: 273 TFASALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDM 332

Query: 117 MP--ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           +P   R    +   + GY  +    EA+ LF+ +  E   +   + T    VL +   +E
Sbjct: 333 VPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVP--SETTIAGVLPACARSE 390

Query: 175 LCP---CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF-----------DGLFN 220
                  V   V K G   N FV  AL+D ++  G +E AR +F           + L  
Sbjct: 391 TFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLIT 450

Query: 221 DC-----FEEALNFFSQMRAVG------------------FKPNNFTFAFVLKACLGLDT 257
            C       +A     +M+  G                    PNN T   +L  C  L  
Sbjct: 451 GCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAA 510

Query: 258 IRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIAR 317
               K  HG A++   + D+ V  AL+D+Y K G ++ +R +F+ +PK++VI W+ +I  
Sbjct: 511 PAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMA 570

Query: 318 YAQTDLSIDAVELFCRMRQAFVA-PNQFTFVSVLQACATMEGLDLGNQI-HSLVVRVGLL 375
           Y    L  +A+ LF RM  +  A PN+ TF++ L AC+    +D G ++ HS+    G+ 
Sbjct: 571 YGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQ 630

Query: 376 SDVFVSNALMDVYAKCGRMENSVELFAE-SPKRNHVT-WNTMIVG-----YVQLGEV 425
               +    +D+  + GR++ +  +     P    V+ W++ +        V LGE+
Sbjct: 631 PTPDLHACAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEI 687


>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial; Flags: Precursor
 gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 628

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 246/599 (41%), Positives = 373/599 (62%), Gaps = 16/599 (2%)

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           N   +EAL    +M  +G +     +  +L ACL    +R  +  H   +KT Y    Y+
Sbjct: 33  NGRLQEAL---LEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYL 89

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
              LL  Y K   + +AR++ +EMP+K+V+ W+ MI+RY+QT  S +A+ +F  M ++  
Sbjct: 90  RTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDG 149

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
            PN+FTF +VL +C    GL LG QIH L+V+    S +FV ++L+D+YAK G+++ + E
Sbjct: 150 KPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEARE 209

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +F   P+R+ V+   +I GY QLG   +A+ MF ++  E +    VTY+S+L A + LA 
Sbjct: 210 IFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLAL 269

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
           L+ G Q HC  ++       V+ N+LIDMY+KCG+++ AR +FD M +   +SWNAM+ G
Sbjct: 270 LDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVG 329

Query: 520 YSMHGLSAEVLKVFDLMQ-QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN-YGI 577
           YS HGL  EVL++F LM+ ++  +P+ +T + VLS CS+G + + G   F  MVA  YG 
Sbjct: 330 YSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGT 389

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQ 637
           +P  EHY  +V +LGRAG +D+A + I+ +P +P+  +  +LLGAC +H +V+IG    +
Sbjct: 390 KPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGR 449

Query: 638 HILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFR 686
            +++ EPE+   +V+LSN+YA A  W           +KA +KEPG SWI+++  +HYF 
Sbjct: 450 RLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFH 509

Query: 687 AGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFA 746
           A D +H     +   ++ +++K ++AGY+PDLS VL DV E++KE+ L  HSEKLAL F 
Sbjct: 510 ANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFG 569

Query: 747 LFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           L       PIR+ KNLRICVDCH   KI SK+ +RE+ +RD +RFH   DG CSCGD+W
Sbjct: 570 LIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 185/397 (46%), Gaps = 27/397 (6%)

Query: 36  TQQCSNSTTTPITFSVS----EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDL 91
           +Q CSN         ++    E   H Y   L +C+    L+    +H  ++K       
Sbjct: 28  SQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPAT 87

Query: 92  FATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHRE 151
           +    LL  Y K + L DA K+ DEMPE+N +S+   I  Y+ +    EA+ +F+ + R 
Sbjct: 88  YLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRS 147

Query: 152 GHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFA 211
             + N F F   L   +      L   +   + K  +DS+ FVG++L+D ++  G ++ A
Sbjct: 148 DGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEA 207

Query: 212 RKVFDGLFN----DCF------------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGL 255
           R++F+ L       C             EEAL  F ++ + G  PN  T+A +L A  GL
Sbjct: 208 REIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGL 267

Query: 256 DTIRVAKSAHGCALKTCYEMDLYVAV--ALLDLYTKSGEISNARRIFEEMPKKDVIPWSF 313
             +   K AH   L+   E+  Y  +  +L+D+Y+K G +S ARR+F+ MP++  I W+ 
Sbjct: 268 ALLDHGKQAHCHVLRR--ELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNA 325

Query: 314 MIARYAQTDLSIDAVELFCRMR-QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV-- 370
           M+  Y++  L  + +ELF  MR +  V P+  T ++VL  C+     D G  I   +V  
Sbjct: 326 MLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAG 385

Query: 371 RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKR 407
             G          ++D+  + GR++ + E     P +
Sbjct: 386 EYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 422


>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
          Length = 1725

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 247/601 (41%), Positives = 363/601 (60%), Gaps = 20/601 (3%)

Query: 225  EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
            EAL  FS +R +G  P   +F   +K+C  L  +   + +H  A    +E DL+V+ AL+
Sbjct: 1125 EALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALI 1184

Query: 285  DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA------- 337
            D+Y+K G++ +AR +F+E+P ++V+ W+ MI  Y Q + + +A+ LF    +        
Sbjct: 1185 DMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDG 1244

Query: 338  -FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
              V  +    VSVL AC+ + G  +   +H  VV+ G    + V N LMD YAKCG+   
Sbjct: 1245 NNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLV 1304

Query: 397  SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE-QVPATEVTYSSVLRACA 455
            S ++F    +++ ++WN+MI  Y Q G  G+A+ +F  M+    V    VT S+VL ACA
Sbjct: 1305 SKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACA 1364

Query: 456  SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
               AL  G  +H   +K + + +V V  ++IDMY KCG +  A+  FD M + N  SW A
Sbjct: 1365 HAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTA 1424

Query: 516  MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
            M++GY MHG + E L +F  M + G +PN +TFV VL+ACS+ GL+E+G  +F +M   Y
Sbjct: 1425 MVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKY 1484

Query: 576  GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS 635
             IEP IEHY  MV L GRAG L++A  LI+ +  +P  ++W +LLGAC IH NV++G ++
Sbjct: 1485 DIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIA 1544

Query: 636  AQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHY 684
            AQ + + +P++   +VLLSN+YA A  W            +   K PG S +E +G VH 
Sbjct: 1545 AQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHV 1604

Query: 685  FRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALA 744
            F  GD  H    +I   LE L ++ +K GY+P++++VL DV E+EKE  L VHSEKLA+A
Sbjct: 1605 FLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVA 1664

Query: 745  FALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
            F +    P + I IIKNLR+C DCHT IK+ISK+V R+ ++RD  RFHHF+DG CSCGD+
Sbjct: 1665 FGVMNSAPGTTINIIKNLRVCGDCHTVIKLISKLVHRDFVVRDSKRFHHFKDGVCSCGDY 1724

Query: 805  W 805
            W
Sbjct: 1725 W 1725



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/387 (32%), Positives = 195/387 (50%), Gaps = 34/387 (8%)

Query: 247 FVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK 306
           F+L+ C     +R     H   +++    D  +   L+ LY+  G I+ A  +F ++   
Sbjct: 32  FLLQNCKNFKHLR---QIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNP 88

Query: 307 DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIH 366
               W+ +I       LS  A+ L+  M    +A ++FTF  V++AC     +DLG  +H
Sbjct: 89  CTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVH 148

Query: 367 SLVVRVGLLSDVFVSNALMDVYAKCG------------RMENSV---------------- 398
             +++ G   DVFV N L+D Y KCG            R+ N V                
Sbjct: 149 GSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQ 208

Query: 399 ---ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
               +F E P +N V+W  MI GY++  +  +A+ +F +M  E +   E T  S+++AC 
Sbjct: 209 EARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACT 268

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
            +  L  G  +H   +K   ++ V +  ALIDMY+KCGSI DA  VF+ M   +  +WN+
Sbjct: 269 EMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNS 328

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           MI+   +HGL  E L +F  M++   +P+ +TF+GVL AC +   +++G AYF  M  +Y
Sbjct: 329 MITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHY 388

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           GI P  EHY  M  L  R+ +LD+A K
Sbjct: 389 GIAPIPEHYECMTELYARSNNLDEAFK 415



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/340 (31%), Positives = 185/340 (54%), Gaps = 11/340 (3%)

Query: 300  FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL 359
            ++ + K +V  W+ +IA  A+   S++A+  F  +R+  + P + +F   +++C+ +  L
Sbjct: 1099 YKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDL 1158

Query: 360  DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGY 419
              G   H      G  +D+FVS+AL+D+Y+KCG+++++  LF E P RN V+W +MI GY
Sbjct: 1159 VSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGY 1218

Query: 420  VQLGEVGKAMIMFSKMLEEQ--------VPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
            VQ  +   A+++F   LEE+        VP   V   SVL AC+ ++       VH   V
Sbjct: 1219 VQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVV 1278

Query: 472  KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
            K  +D  + V N L+D YAKCG    ++ VFD M + +++SWN+MI+ Y+  GLS E L+
Sbjct: 1279 KKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALE 1338

Query: 532  VF-DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSL 590
            VF  +++  G R N +T   VL AC++ G L  G+      V    +E  +   TS++ +
Sbjct: 1339 VFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKC-IHDQVIKMDLEYNVCVGTSIIDM 1397

Query: 591  LGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
              + G ++ A K  + +  + +V  W A++    +H   +
Sbjct: 1398 YCKCGRVEMAKKTFDRMK-EKNVKSWTAMVAGYGMHGRAK 1436



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 188/400 (47%), Gaps = 32/400 (8%)

Query: 58   SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
            S+  +++SC    DL +    H Q    G   DLF ++ L+++Y K  +L DA  LFDE+
Sbjct: 1144 SFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEI 1203

Query: 118  PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHE--------LNPFAFTAFLKVLVS 169
            P RN +S+ + I GY  + Q   A+ LF     E  E        L+     + L     
Sbjct: 1204 PLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSR 1263

Query: 170  MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDC 222
            +    +   V   V K G D +  VG  L+DA++ CG    ++KVFD +       +N  
Sbjct: 1264 VSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSM 1323

Query: 223  FE---------EALNFFSQM-RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC 272
                       EAL  F  M R VG + N  T + VL AC     +R  K  H   +K  
Sbjct: 1324 IAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMD 1383

Query: 273  YEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFC 332
             E ++ V  +++D+Y K G +  A++ F+ M +K+V  W+ M+A Y     + +A+++F 
Sbjct: 1384 LEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFY 1443

Query: 333  RMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVYAKC 391
            +M +A V PN  TFVSVL AC+    ++ G +  +++  +  +   +     ++D++ + 
Sbjct: 1444 KMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRA 1503

Query: 392  GRMENSVELFAESP-KRNHVTWNTM-----IVGYVQLGEV 425
            G +  +  L      K + V W ++     I   V LGE+
Sbjct: 1504 GCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEI 1543



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 151/347 (43%), Gaps = 50/347 (14%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           LQ+C    + +    IH ++++ G   D   T  L+++Y    R+  A  LF ++    T
Sbjct: 34  LQNC---KNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCT 90

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
            ++   I+  T++    +A+ L+  +  +G   + F F   +K   +    +L   V   
Sbjct: 91  FTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGS 150

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GLF-------- 219
           + K G   + FV   LID +  CG   FA KVF+               GL         
Sbjct: 151 LIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEA 210

Query: 220 ------------------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGL 255
                                   N   EEAL  F +M+A    PN +T   ++KAC  +
Sbjct: 211 RRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEM 270

Query: 256 DTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMI 315
             + + +  H  A+K C E+ +Y+  AL+D+Y+K G I +A  +FE MP+K +  W+ MI
Sbjct: 271 GILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMI 330

Query: 316 ARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG 362
                  L  +A+ LF  M +  V P+  TF+ VL AC  ++ +  G
Sbjct: 331 TSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEG 377



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/264 (21%), Positives = 109/264 (41%), Gaps = 32/264 (12%)

Query: 53   EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
             +N+ + +  L +C     L+    IH QV+K     ++     ++++Y K  R+  A K
Sbjct: 1350 RYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKK 1409

Query: 113  LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
             FD M E+N  S+   + GY +  +  EA+ +F  + R G + N   +  F+ VL +   
Sbjct: 1410 TFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPN---YITFVSVLAACSH 1466

Query: 173  AELCPCVFACVYKLGHDSNAFVGTA----LIDAFSVCGCVEFARKVFDGLFNDCFEEALN 228
            A L    +     + H  +   G      ++D F   GC+                EA N
Sbjct: 1467 AGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCL---------------NEAYN 1511

Query: 229  FFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD---LYVAVALLD 285
               +M+    KP+   +  +L AC     + + +     A +  +E+D       V L +
Sbjct: 1512 LIKRMK---MKPDFVVWGSLLGACRIHKNVDLGE----IAAQKLFELDPDNCGYYVLLSN 1564

Query: 286  LYTKSGEISNARRIFEEMPKKDVI 309
            LY  +G  ++  R+   M  + ++
Sbjct: 1565 LYADAGRWADVERMRMLMKNRQLV 1588



 Score = 42.4 bits (98), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 15/127 (11%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDL--FATNVLLNVYVKLNRLPDATK 112
           N ++  + +++C +   L     IH   +K  NC+++  +    L+++Y K   + DA +
Sbjct: 256 NEYTMVSLIKACTEMGILTLGRGIHDYAIK--NCIEIGVYLGTALIDMYSKCGSIKDAIE 313

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +F+ MP ++  ++ + I    V     EA+ LFS + R    + P A T F+ V      
Sbjct: 314 VFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERV--NVKPDAIT-FIGV------ 364

Query: 173 AELCPCV 179
             LC CV
Sbjct: 365 --LCACV 369


>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 666

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 244/587 (41%), Positives = 370/587 (63%), Gaps = 13/587 (2%)

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
           QM  +G +     +  +L  C+    IR  +  H   +KTCY   +Y+   L+ LY K  
Sbjct: 80  QMAILGREVKFEGYDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCD 139

Query: 292 EISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQ 351
            + +AR +F+EMP+K+V+ W+ MI+ Y+Q   + +A+ LF  M ++   PN FTF ++L 
Sbjct: 140 CLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILT 199

Query: 352 ACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
           +C    G + G QIHS+ ++    S +FV ++L+D+YAK GR+ ++  +F   P+R+ V 
Sbjct: 200 SCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVA 259

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
              +I GY Q+G   +A+ +F ++  E + +  VTY+SVL A + LAAL  G QVH   +
Sbjct: 260 CTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVL 319

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
           ++     VV+ N+LIDMY+KCG++  AR +FD M +   +SWNAM+ GYS HG++ EVL+
Sbjct: 320 RSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLE 379

Query: 532 VFDLMQQRGW-RPNNLTFVGVLSACSNGGLLEQGEAYFKSMV-ANYGIEPCIEHYTSMVS 589
           +F LM++    +P+++T++ VLS CS+G L + G   F +MV    GIEP I HY  +V 
Sbjct: 380 LFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVD 439

Query: 590 LLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEAT 649
           LLGRAG +++A   I+ +PF P+  IW +LLG+C +H++VEIG +  Q +L+ EPE+   
Sbjct: 440 LLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGN 499

Query: 650 HVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNII 698
           +V+LSN+YA A  W           EKA +KEPG SW+E   +VH F A D +H     +
Sbjct: 500 YVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEV 559

Query: 699 RGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRI 758
              ++ L++K ++ GY+PDLS VL DV E++KE+ L  HSEKLALAF L   P  + IR+
Sbjct: 560 AKKVKELSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRV 619

Query: 759 IKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           IKNLRICVDCH+  K +S++  R +I+RD +RFH+   G CSCGD+W
Sbjct: 620 IKNLRICVDCHSFAKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 666



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 186/356 (52%), Gaps = 26/356 (7%)

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFE----------------EALNFFSQMR 234
           + ++ T LI  ++ C C+  AR++FD +                      EALN F +M 
Sbjct: 124 SVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEML 183

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
               +PN+FTFA +L +C G       +  H  A+K  YE  ++V  +LLD+Y KSG I 
Sbjct: 184 RSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRIC 243

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
           +A  +F  +P++DV+  + +I+ YAQ  L  +A++LF +++   +  N  T+ SVL A +
Sbjct: 244 DAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALS 303

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
            +  L+ G Q+HS V+R G  S V + N+L+D+Y+KCG +  +  +F   P+R  ++WN 
Sbjct: 304 GLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNA 363

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEE-QVPATEVTYSSVLRACASLAALEPGMQV--HCLTV 471
           M+VGY + G   + + +F  M EE +V    +TY +VL  C+     + G+++  + +  
Sbjct: 364 MLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNG 423

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS----WNAMISGYSMH 523
           K   + D+     ++D+  + G + +A   FD +     V     W +++    +H
Sbjct: 424 KDGIEPDIGHYGCVVDLLGRAGRVEEA---FDFIKKMPFVPTAAIWGSLLGSCRVH 476



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 191/405 (47%), Gaps = 20/405 (4%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E     Y T L  C+    ++    +H  ++K      ++    L+ +Y K + L DA +
Sbjct: 87  EVKFEGYDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARE 146

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +FDEMP++N +S+   I  Y+      EA+ LF  + R   E N F F   L        
Sbjct: 147 MFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLG 206

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN------------ 220
            E    + +   K  ++S+ FVG++L+D ++  G +  A  VF  L              
Sbjct: 207 FETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISG 266

Query: 221 ----DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
                  EEAL  F Q++  G   N+ T+A VL A  GL  +   K  H   L++     
Sbjct: 267 YAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSY 326

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           + +  +L+D+Y+K G +  ARRIF+ MP++  I W+ M+  Y++  ++ + +ELF  MR+
Sbjct: 327 VVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMRE 386

Query: 337 A-FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV--RVGLLSDVFVSNALMDVYAKCGR 393
              V P+  T+++VL  C+  +  D+G +I   +V  + G+  D+     ++D+  + GR
Sbjct: 387 ENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGR 446

Query: 394 MENSVELFAESP-KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
           +E + +   + P       W +++       +V   +I+  K+LE
Sbjct: 447 VEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLE 491



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 119/279 (42%), Gaps = 29/279 (10%)

Query: 50  SVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD 109
           S +E N  ++AT L SC  +   +T   IH   +K+     +F  + LL++Y K  R+ D
Sbjct: 185 SDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICD 244

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A  +F  +PER+ ++    I GY       EA+ LF  L  EG   N   + + L  L  
Sbjct: 245 AHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSG 304

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-FNDCF----- 223
           +        V + V + G  S   +  +LID +S CG V +AR++FD +    C      
Sbjct: 305 LAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAM 364

Query: 224 ----------EEALNFFSQMRAVG-FKPNNFTFAFVLKAC-------LGLDTIRVAKSAH 265
                      E L  F  MR     KP++ T+  VL  C       +GL+      +  
Sbjct: 365 LVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNG- 423

Query: 266 GCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
               K   E D+     ++DL  ++G +  A    ++MP
Sbjct: 424 ----KDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMP 458


>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Glycine max]
          Length = 778

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 272/754 (36%), Positives = 411/754 (54%), Gaps = 30/754 (3%)

Query: 79  HCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQF 138
           H Q+++ G   DL     L      +     A  LF  +P+ +   F   I+G++ S   
Sbjct: 28  HAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKGFSFSPD- 86

Query: 139 VEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTAL 198
             ++  ++ L +    L+P  FT    +  S     L  C+ A     G DSN FV +AL
Sbjct: 87  ASSISFYTHLLKNT-TLSPDNFTYAFAISASPD-DNLGMCLHAHAVVDGFDSNLFVASAL 144

Query: 199 IDAFSVCGCVEFARKVFD---------------GLF-NDCFEEALNFFSQMRAVGFKPNN 242
           +D +     V +ARKVFD               GL  N C+++++  F  M A G + ++
Sbjct: 145 VDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLDS 204

Query: 243 FTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEE 302
            T A VL A   +  ++V       ALK  +  D YV   L+ +++K  ++  AR +F  
Sbjct: 205 TTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFGM 264

Query: 303 MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG 362
           + K D++ ++ +I+ ++    +  AV+ F  +  +    +  T V ++   +    L L 
Sbjct: 265 IRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLA 324

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
             I    V+ G +    VS AL  +Y++   ++ + +LF ES ++    WN MI GY Q 
Sbjct: 325 CCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQS 384

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
           G    A+ +F +M+  +     VT +S+L ACA L AL  G  VH L    N + ++ V+
Sbjct: 385 GLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVS 444

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
            ALIDMYAKCG+I++A  +FD+ ++ N V+WN MI GY +HG   E LK+F+ M   G++
Sbjct: 445 TALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQ 504

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           P+++TF+ VL ACS+ GL+ +G+  F +MV  Y IEP  EHY  MV +LGRAG L+KA +
Sbjct: 505 PSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEKALE 564

Query: 603 LIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARS 662
            I  +P +P   +W  LLGAC+IH +  + R++++ + + +P +   +VLLSNIY++ R+
Sbjct: 565 FIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFELDPGNVGYYVLLSNIYSVERN 624

Query: 663 WEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRK 711
           + KAA           SK PG + IE  G  H F  GD SH+    I   LE L  K R+
Sbjct: 625 FPKAASVREAVKKRNLSKTPGCTLIEVNGTPHVFVCGDRSHSQTTSIYAKLEELTGKMRE 684

Query: 712 AGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTA 771
            GY  +    L DV E+EKE    VHSEKLA+AF L    P + IRIIKNLR+C+DCH A
Sbjct: 685 MGYQSETVTALHDVEEEEKELMFNVHSEKLAIAFGLITTEPGTEIRIIKNLRVCLDCHAA 744

Query: 772 IKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            K ISKI +R I++RD +RFHHF+DG CSCGD+W
Sbjct: 745 TKFISKITERVIVVRDANRFHHFKDGICSCGDYW 778



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 142/526 (26%), Positives = 250/526 (47%), Gaps = 36/526 (6%)

Query: 22  NAWLRGLS-----AQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAM 76
           N  ++G S     +  +  T    N+T +P  F+        YA ++ S   +D+L   M
Sbjct: 75  NVLIKGFSFSPDASSISFYTHLLKNTTLSPDNFT--------YAFAI-SASPDDNL--GM 123

Query: 77  TIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSS 136
            +H   +  G   +LF  + L+++Y K +R+  A K+FD+MP+R+T+ + T I G   + 
Sbjct: 124 CLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNC 183

Query: 137 QFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGT 196
            + ++V +F  +  +G  L+       L  +  M   ++   +     KLG   + +V T
Sbjct: 184 CYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLT 243

Query: 197 ALIDAFSVCGCVEFARKVFDGLF-----------------NDCFEEALNFFSQMRAVGFK 239
            LI  FS C  V+ AR +F G+                  N   E A+ +F ++   G +
Sbjct: 244 GLISVFSKCEDVDTARLLF-GMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQR 302

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
            ++ T   ++        + +A    G  +K+   +   V+ AL  +Y++  EI  AR++
Sbjct: 303 VSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQL 362

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL 359
           F+E  +K V  W+ MI+ YAQ+ L+  A+ LF  M      PN  T  S+L ACA +  L
Sbjct: 363 FDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGAL 422

Query: 360 DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGY 419
             G  +H L+    L  +++VS AL+D+YAKCG +  + +LF  + ++N VTWNTMI GY
Sbjct: 423 SFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGY 482

Query: 420 VQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV-HCLTVKANYDMD 478
              G   +A+ +F++ML      + VT+ SVL AC+    +  G ++ H +  K   +  
Sbjct: 483 GLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPL 542

Query: 479 VVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
                 ++D+  + G +  A   +  M  +     W  ++    +H
Sbjct: 543 AEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIH 588


>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g01510
 gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
 gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
 gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 267/745 (35%), Positives = 404/745 (54%), Gaps = 32/745 (4%)

Query: 93  ATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREG 152
           +TN +++ +VK   +  A  LFD MP+R  +++   +  Y  +S F EA  LF  + R  
Sbjct: 81  STNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSS 140

Query: 153 HELNP--FAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVC----- 205
               P    FT  L              V A   KLG D+N F+  + +   S C     
Sbjct: 141 SCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRL 200

Query: 206 --GCVEFAR------KVFDGLF-----NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKAC 252
              CV F          F+ L      +  + E+++ F +MR  G +P++FTF+ VLKA 
Sbjct: 201 DLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV 260

Query: 253 LGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWS 312
           +GL    + +  H  ++ T +  D  V   +LD Y+K   +   R +F+EMP+ D + ++
Sbjct: 261 VGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYN 320

Query: 313 FMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV 372
            +I+ Y+Q D    ++  F  M+        F F ++L   A +  L +G Q+H   +  
Sbjct: 321 VVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLA 380

Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMF 432
              S + V N+L+D+YAKC   E +  +F   P+R  V+W  +I GYVQ G  G  + +F
Sbjct: 381 TADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLF 440

Query: 433 SKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKC 492
           +KM    + A + T+++VL+A AS A+L  G Q+H   +++    +V   + L+DMYAKC
Sbjct: 441 TKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKC 500

Query: 493 GSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL 552
           GSI DA  VF+ M D N VSWNA+IS ++ +G     +  F  M + G +P++++ +GVL
Sbjct: 501 GSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVL 560

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
           +ACS+ G +EQG  YF++M   YGI P  +HY  M+ LLGR G   +A KL++ +PF+P 
Sbjct: 561 TACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPD 620

Query: 613 VMIWRALLGACIIHNNVEIGRLSAQHILDFEP-EDEATHVLLSNIYAMARSWEK------ 665
            ++W ++L AC IH N  +   +A+ +   E   D A +V +SNIYA A  WEK      
Sbjct: 621 EIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKK 680

Query: 666 -----AASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSA 720
                   K P  SW+E    +H F + D +H + + I   +  L  +  + GY PD S+
Sbjct: 681 AMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSS 740

Query: 721 VLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQ 780
           V++DV E  K   L  HSE+LA+AFAL   P   PI ++KNLR C DCH AIK+ISKIV+
Sbjct: 741 VVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVK 800

Query: 781 REIIIRDVHRFHHFQDGCCSCGDFW 805
           REI +RD  RFHHF +G CSCGD+W
Sbjct: 801 REITVRDTSRFHHFSEGVCSCGDYW 825



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 142/492 (28%), Positives = 253/492 (51%), Gaps = 32/492 (6%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFAT--NVLLNVYVKLNRLPDATKLFD 115
           ++ T L  C           +H   +K G   + F T  NVLL  Y ++ RL  A  LF+
Sbjct: 149 TFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFE 208

Query: 116 EMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAEL 175
           E+PE+++++F T I GY     + E++ LF  + + GH+ + F F+  LK +V +    L
Sbjct: 209 EIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFAL 268

Query: 176 CPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FN-------- 220
              + A     G   +A VG  ++D +S    V   R +FD +       +N        
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ 328

Query: 221 -DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
            D +E +L+FF +M+ +GF   NF FA +L     L ++++ +  H  AL    +  L+V
Sbjct: 329 ADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHV 388

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
             +L+D+Y K      A  IF+ +P++  + W+ +I+ Y Q  L    ++LF +MR + +
Sbjct: 389 GNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNL 448

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
             +Q TF +VL+A A+   L LG Q+H+ ++R G L +VF  + L+D+YAKCG ++++V+
Sbjct: 449 RADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQ 508

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +F E P RN V+WN +I  +   G+   A+  F+KM+E  +    V+   VL AC+    
Sbjct: 509 VFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGF 568

Query: 460 LEPGMQ-------VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN-DWNEV 511
           +E G +       ++ +T K  +         ++D+  + G   +A  + D M  + +E+
Sbjct: 569 VEQGTEYFQAMSPIYGITPKKKH------YACMLDLLGRNGRFAEAEKLMDEMPFEPDEI 622

Query: 512 SWNAMISGYSMH 523
            W+++++   +H
Sbjct: 623 MWSSVLNACRIH 634



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 35/226 (15%)

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
           ++ + +++ G  +D   SN +++   + G++  + +++ E P +N V+ NTMI G+V+ G
Sbjct: 34  RVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTG 93

Query: 424 EVGKAMIMFSKMLEEQVPA---------------------------------TEVTYSSV 450
           +V  A  +F  M +  V                                     VT++++
Sbjct: 94  DVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTL 153

Query: 451 LRACASLAALEPGMQVHCLTVKANYDMD--VVVANALIDMYAKCGSITDARLVFDMMNDW 508
           L  C          QVH   VK  +D +  + V+N L+  Y +   +  A ++F+ + + 
Sbjct: 154 LPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEK 213

Query: 509 NEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSA 554
           + V++N +I+GY   GL  E + +F  M+Q G +P++ TF GVL A
Sbjct: 214 DSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 43/191 (22%), Positives = 73/191 (38%), Gaps = 34/191 (17%)

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
           +V    +K  +D D   +N +++   + G ++ AR V+D M   N VS N MISG+   G
Sbjct: 34  RVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTG 93

Query: 525 LSAEVLKVFDLMQQR---------GWR------------------------PNNLTFVGV 551
             +    +FD M  R         GW                         P+++TF  +
Sbjct: 94  DVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTL 153

Query: 552 LSACSNGGLLEQ-GEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQ 610
           L  C++       G+ +  ++   +   P +     ++        LD A  L E IP +
Sbjct: 154 LPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEK 213

Query: 611 PSVMIWRALLG 621
            SV     + G
Sbjct: 214 DSVTFNTLITG 224


>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Vitis vinifera]
          Length = 684

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 260/599 (43%), Positives = 350/599 (58%), Gaps = 13/599 (2%)

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           N  F  AL  FS MR    +PN+FTF    KA   L +  V K  H  A+K     D++V
Sbjct: 86  NGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFV 145

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
             +  D+Y+K+G    AR++F+EMP++++  W+  ++         DA+  F   R    
Sbjct: 146 GCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGW 205

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
            PN  TF + L ACA    L LG Q+H  V++ G  +DV V+N L+D Y KC ++  S  
Sbjct: 206 EPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEI 265

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +F+   K N V+W +MIV YVQ  E  KA ++F +  +E +  T+   SSVL ACA L+ 
Sbjct: 266 IFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSV 325

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
           LE G  VH L VKA    ++ V +AL+DMY KCGSI DA   FD M + N V+WNAMI G
Sbjct: 326 LEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGG 385

Query: 520 YSMHGLSAEVLKVFDLMQQRGWR--PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
           Y+  G +   + +FD M     R  PN +TFV VLSACS  G +  G   F+SM   YGI
Sbjct: 386 YAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGI 445

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQ 637
           EP  EHY  +V LLGRAG +++A + I+ +P +P+V +W ALLGA  +    E+G+++A 
Sbjct: 446 EPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAAD 505

Query: 638 HILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFR 686
           ++ + +P D   HVLLSN++A A  WE+A             K  G SWI     VH F+
Sbjct: 506 NLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQ 565

Query: 687 AGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFA 746
           A DTSH   + I+ ML  L  +   AGYIPD S  L D+ E+EK   +W HSEK+ALAF 
Sbjct: 566 AKDTSHERNSEIQAMLAKLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFG 625

Query: 747 LFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           L  +P   PIRI KNLRIC DCH+AIK IS IV REII+RD + FH F+D  CSC D+W
Sbjct: 626 LISIPAGVPIRITKNLRICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQCSCRDYW 684



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 151/501 (30%), Positives = 245/501 (48%), Gaps = 24/501 (4%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKK-GNCLDLFATNVLLNVYVKLNRLPDATK 112
            + +S A+ ++S +     +     H Q++K   N L  F  N L+N+Y KL+R   A  
Sbjct: 4   LSPNSLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQL 63

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           L    P R+ +++   I G   + +F  A+  FS + R+  + N F F    K   S+  
Sbjct: 64  LLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRS 123

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------- 216
             +   V A   K G  S+ FVG +  D +S  G  E ARK+FD                
Sbjct: 124 PLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSN 183

Query: 217 GLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
            +    +++AL  F + R  G++PN  TF   L AC G   +R+ +  HG  L++ +E D
Sbjct: 184 SVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEAD 243

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           + VA  L+D Y K  ++  +  IF  + K + + W  MI  Y Q D    A  +F R R+
Sbjct: 244 VSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARK 303

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             + P  F   SVL ACA +  L++G  +H+L V+  ++ ++FV +AL+D+Y KCG +E+
Sbjct: 304 EGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIED 363

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML--EEQVPATEVTYSSVLRAC 454
           +   F E P+RN VTWN MI GY   G+   A+ +F +M     +V    VT+  VL AC
Sbjct: 364 AERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSAC 423

Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDARLVFDMMNDWNEVS 512
           +   ++  GM++   +++  Y ++    +   ++D+  + G +  A      M     VS
Sbjct: 424 SRAGSVNVGMEIF-ESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVS 482

Query: 513 -WNAMISGYSMHGLSAEVLKV 532
            W A++    M G S E+ KV
Sbjct: 483 VWGALLGASKMFGKS-ELGKV 502



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 199/390 (51%), Gaps = 13/390 (3%)

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC-YEMDLYVAVALLDLYTKSGEISNA 296
             PN  + A ++++ +     R+ ++AH   +KT    +  ++   L+++Y+K    ++A
Sbjct: 4   LSPN--SLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSA 61

Query: 297 RRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM 356
           + +    P + V+ W+ +IA   Q      A+  F  MR+  + PN FTF    +A  ++
Sbjct: 62  QLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSL 121

Query: 357 EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMI 416
               +G Q+H+L V+ G +SDVFV  +  D+Y+K G  E + ++F E P+RN  TWN  +
Sbjct: 122 RSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYL 181

Query: 417 VGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD 476
              V  G    A+  F +   E      +T+ + L ACA  + L  G Q+H   +++ ++
Sbjct: 182 SNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFE 241

Query: 477 MDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLM 536
            DV VAN LID Y KC  +  + ++F  ++  N+VSW +MI  Y  +    +   VF   
Sbjct: 242 ADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRA 301

Query: 537 QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY----TSMVSLLG 592
           ++ G  P +     VLSAC+   +LE G++     V    ++ C+       +++V + G
Sbjct: 302 RKEGIEPTDFMVSSVLSACAGLSVLEVGKS-----VHTLAVKACVVGNIFVGSALVDMYG 356

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           + G ++ A +  + +P + +++ W A++G 
Sbjct: 357 KCGSIEDAERAFDEMP-ERNLVTWNAMIGG 385



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/282 (21%), Positives = 115/282 (40%), Gaps = 31/282 (10%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N  ++   L +C     L+    +H  VL+ G   D+   N L++ Y K +++  +  
Sbjct: 206 EPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEI 265

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +F  + + N +S+ + I  Y  + +  +A  +F    +EG E   F  ++ L     +  
Sbjct: 266 IFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSV 325

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF--------- 223
            E+   V     K     N FVG+AL+D +  CG +E A + FD +              
Sbjct: 326 LEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGG 385

Query: 224 -------EEALNFFSQMRAVGFK--PNNFTFAFVLKAC-------LGLDTIRVAKSAHGC 267
                  + A+  F +M     +  PN  TF  VL AC       +G++     +  +G 
Sbjct: 386 YAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYG- 444

Query: 268 ALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
                 E        ++DL  ++G +  A +  ++MP +  +
Sbjct: 445 -----IEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTV 481


>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
 gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
          Length = 660

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 254/628 (40%), Positives = 372/628 (59%), Gaps = 31/628 (4%)

Query: 206 GCVEFARKVFDGLFN----------------DCFEEALNFFSQMRAVGFKPNNFTFAFVL 249
           G +++AR VF  + N                +  +EAL F+ +M   G  P+ +TF  + 
Sbjct: 36  GSLQYARLVFSQIPNPTSYTCNSIIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLF 95

Query: 250 KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
           K+C         K  H  + K  +  D Y    L+++Y+  G + +AR++F++M  K V+
Sbjct: 96  KSCRNSSE---GKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVV 152

Query: 310 PWSFMIARYAQTDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSL 368
            W+ MI  +AQ D   +AV LF RM +   V PN+ T V+VL ACA    L +  +IH  
Sbjct: 153 SWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEY 212

Query: 369 VVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKA 428
           +   G    V ++  LMDVY KCG ++ + +LF ++ ++N  +WN MI G+V+     +A
Sbjct: 213 IDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEA 272

Query: 429 MIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDM 488
           +++F +M  + +   +VT +S+L AC  L ALE G  +H    K   D+DV +  AL+DM
Sbjct: 273 LLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDM 332

Query: 489 YAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTF 548
           YAKCGSI  A  VF  M + + ++W A+I G +M G +   L+ FD M  +G +P+ +TF
Sbjct: 333 YAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITF 392

Query: 549 VGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIP 608
           VGVL+ACS+ G +++G ++F SM   YGI+P IEHY  +V +LGRAG + +A +LI+ +P
Sbjct: 393 VGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMP 452

Query: 609 FQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA- 667
             P   +   LLGAC IH N+E    +A+ +L+ +P    T+VLLSNIY  ++ WE+A  
Sbjct: 453 MAPDQFVLGGLLGACRIHGNLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKR 512

Query: 668 ----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPD 717
                      K PG S IE  G+VH F  GD+SH   + I  MLE +  K + AGY+PD
Sbjct: 513 TRELMAERGMRKPPGCSQIEVHGVVHEFVKGDSSHRQSSEINEMLEDMISKLKNAGYVPD 572

Query: 718 LSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISK 777
            S VL D+ E+EKE  L +HSEKLA+AF L      +PIR++KNLRIC DCH+A K+ISK
Sbjct: 573 KSEVLFDMAEEEKETELSLHSEKLAIAFGLLSTSVGTPIRVVKNLRICSDCHSATKLISK 632

Query: 778 IVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +  REII+RD +RFHHF+DG CSC  FW
Sbjct: 633 LYNREIIVRDRNRFHHFKDGTCSCRGFW 660



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 183/362 (50%), Gaps = 8/362 (2%)

Query: 262 KSAHGCALKTCYEMDLYVAVALLDLYT--KSGEISNARRIFEEMPKKDVIPWSFMIARYA 319
           K  H   L+T    D + A  ++   +  +SG +  AR +F ++P       + +I    
Sbjct: 5   KQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCT 64

Query: 320 QTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVF 379
             +L  +A+  +  M    + P+++TF S+ ++C        G QIH    ++G  SD +
Sbjct: 65  DKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSSE---GKQIHCHSTKLGFASDTY 121

Query: 380 VSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE-E 438
             N LM++Y+ CG + ++ ++F +   +  V+W TMI  + Q  +  +A+ +F +M++ E
Sbjct: 122 AQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSE 181

Query: 439 QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDA 498
            V   EVT  +VL ACA    L    ++H    +  +   VV+   L+D+Y KCG +  A
Sbjct: 182 NVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLA 241

Query: 499 RLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNG 558
           R +FD   + N  SWN MI+G+       E L +F  MQ +G + + +T   +L AC++ 
Sbjct: 242 RDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHL 301

Query: 559 GLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRA 618
           G LE G+ +  + +    I+  +   T++V +  + G ++ A ++   +P +  VM W A
Sbjct: 302 GALELGK-WLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMP-EKDVMTWTA 359

Query: 619 LL 620
           L+
Sbjct: 360 LI 361



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 176/371 (47%), Gaps = 25/371 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           + +++ +  +SC  + +      IHC   K G   D +A N L+N+Y     L  A K+F
Sbjct: 87  DRYTFPSLFKSCRNSSE---GKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVF 143

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D+M ++  +S+ T I  +    Q  EAV LF  + +    + P   T  + VL +   A 
Sbjct: 144 DKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMK-SENVKPNEVT-LVNVLTACARAR 201

Query: 175 ---LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-----GLF------- 219
              +   +   + + G   +  + T L+D +  CGCV+ AR +FD      LF       
Sbjct: 202 DLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMIN 261

Query: 220 ----NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
               +  +EEAL  F +M+  G K +  T A +L AC  L  + + K  H    K   ++
Sbjct: 262 GHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDV 321

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
           D+ +  AL+D+Y K G I  A ++F EMP+KDV+ W+ +I   A    + +A++ F  M 
Sbjct: 322 DVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMH 381

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
              V P+  TFV VL AC+    +D G +  +S+    G+   +     L+D+  + GR+
Sbjct: 382 IKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRI 441

Query: 395 ENSVELFAESP 405
             + EL    P
Sbjct: 442 AEAEELIKSMP 452


>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 785

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 265/743 (35%), Positives = 410/743 (55%), Gaps = 30/743 (4%)

Query: 93  ATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREG 152
           A   L   ++  N +  A  +FD++P+ + + +   I+ Y  S  F +++ L+  + + G
Sbjct: 43  AATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLG 102

Query: 153 HELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFAR 212
                F F   LK   S+   +L   +    + LG   + +V TAL+  ++ CG +  A+
Sbjct: 103 VTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQ 162

Query: 213 KVFDGL------------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLG 254
            +F+ +                  F+    + ++  +QM+  G  PN+ T   +L     
Sbjct: 163 TLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQ 222

Query: 255 LDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFM 314
            + +   K+ H   ++  +  ++ +  ALLD+Y K   +  AR+IF  + KK+ + WS M
Sbjct: 223 ANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAM 282

Query: 315 IARYAQTDLSIDAVELFCRMRQAF-VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
           I  Y   D   DA+ L+  M   + + P   T  ++L+ACA +  L  G ++H  +++ G
Sbjct: 283 IGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSG 342

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
           +  D  V N+L+ +YAKCG M+N+V    E   ++ V+++ +I G VQ G   KA+++F 
Sbjct: 343 MDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFR 402

Query: 434 KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCG 493
           +M    +     T  ++L AC+ LAAL+ G   H  TV   +  D  + NA+IDMY+KCG
Sbjct: 403 QMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCG 462

Query: 494 SITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLS 553
            IT +R +FD M + + +SWN MI GY +HGL  E L +F  +Q  G +P+++T + VLS
Sbjct: 463 KITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLS 522

Query: 554 ACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSV 613
           ACS+ GL+ +G+ +F SM  N+ I+P + HY  MV LL RAG+LD+A   I+ +PF P+V
Sbjct: 523 ACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNV 582

Query: 614 MIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA------ 667
            IW ALL AC  H N+E+G   ++ I    PE     VL+SNIY+    W+ AA      
Sbjct: 583 RIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQ 642

Query: 668 -----SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVL 722
                 K PG SW+E  G++H F  G  SH     I   L+ L ++ +K GY  D S VL
Sbjct: 643 RHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQSASINKKLQELLVQMKKLGYRADSSFVL 702

Query: 723 RDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQRE 782
            DV E+EKE+ L  HSEK+A+AF +    PSS I + KNLRICVDCH+AIK I+ + +RE
Sbjct: 703 HDVEEEEKEQILLYHSEKVAIAFGILNTSPSSRILVTKNLRICVDCHSAIKFITLLTERE 762

Query: 783 IIIRDVHRFHHFQDGCCSCGDFW 805
           I +RD  RFHHF+DG C+C DFW
Sbjct: 763 ITVRDASRFHHFKDGICNCQDFW 785



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 129/539 (23%), Positives = 249/539 (46%), Gaps = 31/539 (5%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP--ER 120
           L++C     LQ    IH      G  +DL+ +  LL++Y K   L  A  LF+ +   +R
Sbjct: 114 LKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDR 173

Query: 121 NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVF 180
           + +++   I  ++  +   + +   + + + G   N     + L  +           + 
Sbjct: 174 DIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIH 233

Query: 181 ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG----------------LFNDCFE 224
           A   +     N  + TAL+D ++ C  + +ARK+F+                 + +D   
Sbjct: 234 AYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSIS 293

Query: 225 EALNFFSQMRAV-GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
           +AL  +  M  + G  P   T A +L+AC  L  ++  K  H   +K+  ++D  V  +L
Sbjct: 294 DALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSL 353

Query: 284 LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
           + +Y K G + NA    +EM  KD + +S +I+   Q   +  A+ +F +M+ + +AP  
Sbjct: 354 ISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYL 413

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
            T +++L AC+ +  L  G   H   V  G  +D  + NA++D+Y+KCG++  S E+F  
Sbjct: 414 ETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDR 473

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
              R+ ++WNTMI+GY   G   +A+ +F ++    +   +VT  +VL AC+    +  G
Sbjct: 474 MQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEG 533

Query: 464 MQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDARLVFDMMNDWNEVS-WNAMISGY 520
            +    ++  N+++   +A+   ++D+ A+ G++ +A      M     V  W A+++  
Sbjct: 534 -KYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAAC 592

Query: 521 SMHG---LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
             H    +  +V K   L+   G       FV + +  S+ G  +   AY +S+  ++G
Sbjct: 593 RTHKNIEMGEQVSKKIQLLGPEG----TGNFVLMSNIYSSVGRWDDA-AYIRSIQRHHG 646



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 91/366 (24%), Positives = 159/366 (43%), Gaps = 34/366 (9%)

Query: 15  LTHQSK-INAW--------LRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQS 65
           ++HQ + I AW           L AQ   S  Q   +  TP        NS +  + L +
Sbjct: 168 ISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTP--------NSSTLVSILPT 219

Query: 66  CIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISF 125
             Q + L     IH   ++     ++     LL++Y K + L  A K+F+ + ++N + +
Sbjct: 220 IGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCW 279

Query: 126 VTTIQGYTVSSQFVEAVGLF-STLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVY 184
              I GY +     +A+ L+   L   G    P      L+    +   +    +   + 
Sbjct: 280 SAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMI 339

Query: 185 KLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALN 228
           K G D +  VG +LI  ++ CG ++ A    D +                 N   E+AL 
Sbjct: 340 KSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALL 399

Query: 229 FFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYT 288
            F QM++ G  P   T   +L AC  L  ++     HG  +   +  D  +  A++D+Y+
Sbjct: 400 IFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYS 459

Query: 289 KSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVS 348
           K G+I+ +R IF+ M  +D+I W+ MI  Y    L ++A+ LF  ++   + P+  T ++
Sbjct: 460 KCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIA 519

Query: 349 VLQACA 354
           VL AC+
Sbjct: 520 VLSACS 525



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/376 (23%), Positives = 159/376 (42%), Gaps = 68/376 (18%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           + AT L++C Q  DL+    +HC ++K G  LD    N L+++Y K   + +A    DEM
Sbjct: 314 TLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEM 373

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFT--AFLKVLVSMGWAEL 175
             ++T+S+   I G   +    +A+ +F  +   G  + P+  T  A L     +   + 
Sbjct: 374 IAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSG--IAPYLETMIALLPACSHLAALQH 431

Query: 176 CPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-----------------GL 218
             C        G  ++  +  A+ID +S CG +  +R++FD                 G+
Sbjct: 432 GTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGI 491

Query: 219 FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAK---SAHGCALKTCYEM 275
              C  EAL+ F +++A+G KP++ T   VL AC     +   K   S+          M
Sbjct: 492 HGLCV-EALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRM 550

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
             Y  + ++DL  ++G +  A    + MP                               
Sbjct: 551 AHY--ICMVDLLARAGNLDEAYTFIQRMP------------------------------- 577

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALM--DVYAKCGR 393
             FV PN   + ++L AC T + +++G Q+     ++ LL      N ++  ++Y+  GR
Sbjct: 578 --FV-PNVRIWGALLAACRTHKNIEMGEQVSK---KIQLLGPEGTGNFVLMSNIYSSVGR 631

Query: 394 MENSVELFAESPKRNH 409
            +++   +  S +R+H
Sbjct: 632 WDDAA--YIRSIQRHH 645


>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
          Length = 2598

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 247/601 (41%), Positives = 363/601 (60%), Gaps = 20/601 (3%)

Query: 225  EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
            EAL  FS +R +G  P   +F   +K+C  L  +   + +H  A    +E DL+V+ AL+
Sbjct: 1998 EALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALI 2057

Query: 285  DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA------- 337
            D+Y+K G++ +AR +F+E+P ++V+ W+ MI  Y Q + + +A+ LF    +        
Sbjct: 2058 DMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDG 2117

Query: 338  -FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
              V  +    VSVL AC+ + G  +   +H  VV+ G    + V N LMD YAKCG+   
Sbjct: 2118 NNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLV 2177

Query: 397  SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE-QVPATEVTYSSVLRACA 455
            S ++F    +++ ++WN+MI  Y Q G  G+A+ +F  M+    V    VT S+VL ACA
Sbjct: 2178 SKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACA 2237

Query: 456  SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
               AL  G  +H   +K + + +V V  ++IDMY KCG +  A+  FD M + N  SW A
Sbjct: 2238 HAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTA 2297

Query: 516  MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
            M++GY MHG + E L +F  M + G +PN +TFV VL+ACS+ GL+E+G  +F +M   Y
Sbjct: 2298 MVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKY 2357

Query: 576  GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS 635
             IEP IEHY  MV L GRAG L++A  LI+ +  +P  ++W +LLGAC IH NV++G ++
Sbjct: 2358 DIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIA 2417

Query: 636  AQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHY 684
            AQ + + +P++   +VLLSN+YA A  W            +   K PG S +E +G VH 
Sbjct: 2418 AQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHV 2477

Query: 685  FRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALA 744
            F  GD  H    +I   LE L ++ +K GY+P++++VL DV E+EKE  L VHSEKLA+A
Sbjct: 2478 FLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVA 2537

Query: 745  FALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
            F +    P + I IIKNLR+C DCHT IK+ISK+V R+ ++RD  RFHHF+DG CSCGD+
Sbjct: 2538 FGVMNSAPGTTINIIKNLRVCGDCHTVIKLISKLVHRDFVVRDSKRFHHFKDGVCSCGDY 2597

Query: 805  W 805
            W
Sbjct: 2598 W 2598



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/387 (32%), Positives = 195/387 (50%), Gaps = 34/387 (8%)

Query: 247 FVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK 306
           F+L+ C     +R     H   +++    D  +   L+ LY+  G I+ A  +F ++   
Sbjct: 32  FLLQNCKNFKHLR---QIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNP 88

Query: 307 DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIH 366
               W+ +I       LS  A+ L+  M    +A ++FTF  V++AC     +DLG  +H
Sbjct: 89  CTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVH 148

Query: 367 SLVVRVGLLSDVFVSNALMDVYAKCG------------RMENSV---------------- 398
             +++ G   DVFV N L+D Y KCG            R+ N V                
Sbjct: 149 GSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQ 208

Query: 399 ---ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
               +F E P +N V+W  MI GY++  +  +A+ +F +M  E +   E T  S+++AC 
Sbjct: 209 EARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACT 268

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
            +  L  G  +H   +K   ++ V +  ALIDMY+KCGSI DA  VF+ M   +  +WN+
Sbjct: 269 EMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNS 328

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           MI+   +HGL  E L +F  M++   +P+ +TF+GVL AC +   +++G AYF  M  +Y
Sbjct: 329 MITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHY 388

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           GI P  EHY  M  L  R+ +LD+A K
Sbjct: 389 GIAPIPEHYECMTELYARSNNLDEAFK 415



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 184/336 (54%), Gaps = 11/336 (3%)

Query: 300  FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL 359
            ++ + K +V  W+ +IA  A+   S++A+  F  +R+  + P + +F   +++C+ +  L
Sbjct: 1972 YKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDL 2031

Query: 360  DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGY 419
              G   H      G  +D+FVS+AL+D+Y+KCG+++++  LF E P RN V+W +MI GY
Sbjct: 2032 VSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGY 2091

Query: 420  VQLGEVGKAMIMFSKMLEEQ--------VPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
            VQ  +   A+++F   LEE+        VP   V   SVL AC+ ++       VH   V
Sbjct: 2092 VQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVV 2151

Query: 472  KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
            K  +D  + V N L+D YAKCG    ++ VFD M + +++SWN+MI+ Y+  GLS E L+
Sbjct: 2152 KKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALE 2211

Query: 532  VF-DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSL 590
            VF  +++  G R N +T   VL AC++ G L  G+      V    +E  +   TS++ +
Sbjct: 2212 VFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKC-IHDQVIKMDLEYNVCVGTSIIDM 2270

Query: 591  LGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH 626
              + G ++ A K  + +  + +V  W A++    +H
Sbjct: 2271 YCKCGRVEMAKKTFDRMK-EKNVKSWTAMVAGYGMH 2305



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 188/401 (46%), Gaps = 32/401 (7%)

Query: 58   SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
            S+  +++SC    DL +    H Q    G   DLF ++ L+++Y K  +L DA  LFDE+
Sbjct: 2017 SFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEI 2076

Query: 118  PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHE--------LNPFAFTAFLKVLVS 169
            P RN +S+ + I GY  + Q   A+ LF     E  E        L+     + L     
Sbjct: 2077 PLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSR 2136

Query: 170  MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDC 222
            +    +   V   V K G D +  VG  L+DA++ CG    ++KVFD +       +N  
Sbjct: 2137 VSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSM 2196

Query: 223  FE---------EALNFFSQM-RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC 272
                       EAL  F  M R VG + N  T + VL AC     +R  K  H   +K  
Sbjct: 2197 IAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMD 2256

Query: 273  YEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFC 332
             E ++ V  +++D+Y K G +  A++ F+ M +K+V  W+ M+A Y     + +A+++F 
Sbjct: 2257 LEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFY 2316

Query: 333  RMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVYAKC 391
            +M +A V PN  TFVSVL AC+    ++ G +  +++  +  +   +     ++D++ + 
Sbjct: 2317 KMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRA 2376

Query: 392  GRMENSVELFAESP-KRNHVTWNTM-----IVGYVQLGEVG 426
            G +  +  L      K + V W ++     I   V LGE+ 
Sbjct: 2377 GCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIA 2417



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 151/347 (43%), Gaps = 50/347 (14%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           LQ+C    + +    IH ++++ G   D   T  L+++Y    R+  A  LF ++    T
Sbjct: 34  LQNC---KNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCT 90

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
            ++   I+  T++    +A+ L+  +  +G   + F F   +K   +    +L   V   
Sbjct: 91  FTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGS 150

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GLF-------- 219
           + K G   + FV   LID +  CG   FA KVF+               GL         
Sbjct: 151 LIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEA 210

Query: 220 ------------------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGL 255
                                   N   EEAL  F +M+A    PN +T   ++KAC  +
Sbjct: 211 RRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEM 270

Query: 256 DTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMI 315
             + + +  H  A+K C E+ +Y+  AL+D+Y+K G I +A  +FE MP+K +  W+ MI
Sbjct: 271 GILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMI 330

Query: 316 ARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG 362
                  L  +A+ LF  M +  V P+  TF+ VL AC  ++ +  G
Sbjct: 331 TSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEG 377



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/263 (22%), Positives = 109/263 (41%), Gaps = 32/263 (12%)

Query: 54   FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
            +N+ + +  L +C     L+    IH QV+K     ++     ++++Y K  R+  A K 
Sbjct: 2224 YNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKT 2283

Query: 114  FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
            FD M E+N  S+   + GY +  +  EA+ +F  + R G + N   +  F+ VL +   A
Sbjct: 2284 FDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPN---YITFVSVLAACSHA 2340

Query: 174  ELCPCVFACVYKLGHDSNAFVGTA----LIDAFSVCGCVEFARKVFDGLFNDCFEEALNF 229
             L    +     + H  +   G      ++D F   GC+                EA N 
Sbjct: 2341 GLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCL---------------NEAYNL 2385

Query: 230  FSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD---LYVAVALLDL 286
              +M+    KP+   +  +L AC     + + +     A +  +E+D       V L +L
Sbjct: 2386 IKRMK---MKPDFVVWGSLLGACRIHKNVDLGE----IAAQKLFELDPDNCGYYVLLSNL 2438

Query: 287  YTKSGEISNARRIFEEMPKKDVI 309
            Y  +G  ++  R+   M  + ++
Sbjct: 2439 YADAGRWADVERMRMLMKNRQLV 2461



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 24/162 (14%)

Query: 21  INAWLRGLSAQAALST-QQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIH 79
           IN ++R    + AL   ++       P        N ++  + +++C +   L     IH
Sbjct: 229 INGYIRNQQPEEALELFKRMQAENIFP--------NEYTMVSLIKACTEMGILTLGRGIH 280

Query: 80  CQVLKKGNCLDL--FATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
              +K  NC+++  +    L+++Y K   + DA ++F+ MP ++  ++ + I    V   
Sbjct: 281 DYAIK--NCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGL 338

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCV 179
             EA+ LFS + R    + P A T F+ V        LC CV
Sbjct: 339 GQEALNLFSEMERVN--VKPDAIT-FIGV--------LCACV 369


>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 711

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 253/627 (40%), Positives = 369/627 (58%), Gaps = 30/627 (4%)

Query: 206 GCVEFARKVFDGLFN----------------DCFEEALNFFSQMRAVGFKPNNFTFAFVL 249
           G + +AR VF+ + N                +   +A+ F+  M   G  P+ FTF  + 
Sbjct: 88  GSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLF 147

Query: 250 KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
           K+C     +   K  H  + K  +  D Y+   L+++Y+  G + +AR++F++M  K V+
Sbjct: 148 KSC---GVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVV 204

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
            W+ MI  YAQ DL  +A++LF RM  A V PN+ T V+VL ACA    L+   Q+H  +
Sbjct: 205 SWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYI 264

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAM 429
              G+     +++ALMDVY KCG    + +LF + P++N   WN MI G+V+  +  +A+
Sbjct: 265 DETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEAL 324

Query: 430 IMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMY 489
            +F++M    V   +VT +S+L AC  L ALE G  +H    K   ++DV +  AL+DMY
Sbjct: 325 SLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMY 384

Query: 490 AKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFV 549
           AKCGSI  A  VF  M + + ++W A+I G +M G   + L++F  MQ    +P+ +TFV
Sbjct: 385 AKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFV 444

Query: 550 GVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF 609
           GVL+ACS+ GL+ +G AYF SM   YGI+P IEHY  MV +LGRAG + +A  LI+ +P 
Sbjct: 445 GVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPM 504

Query: 610 QPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-- 667
            P   +   LL AC IH N+ +   +AQ +++ +P++  T+VLLSNIY+  ++WE A   
Sbjct: 505 APDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKM 564

Query: 668 ---------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDL 718
                     K PG S IE  G+VH F  GD SH   + I   L+ +  + + AGY+PD 
Sbjct: 565 RELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDK 624

Query: 719 SAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKI 778
           S VL D+ E EKE  L +HSEKLA+AF L    P +PIR++KNLR+C DCH+A+K IS++
Sbjct: 625 SEVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEV 684

Query: 779 VQREIIIRDVHRFHHFQDGCCSCGDFW 805
             REII+RD +RFHHF  G CSC DFW
Sbjct: 685 YNREIIVRDRNRFHHFTKGSCSCRDFW 711



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 143/540 (26%), Positives = 246/540 (45%), Gaps = 59/540 (10%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLN---RLP 108
           S+   H    SL+ C     L+    IH Q+L+    +D F+ + ++  +  L+    LP
Sbjct: 36  SQIQLHPCLLSLEKCTTMSQLKQ---IHAQMLRTCLFVDPFSASKIV-AFCALHDSGSLP 91

Query: 109 DATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLV 168
            A  +F+++P   T +  + I+GYT  +   +A+  +  +  +G + + F F +  K   
Sbjct: 92  YARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCG 151

Query: 169 SMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN-------- 220
            +   +   C      KLG  S+A++   L++ +S CGC+  ARKVFD + N        
Sbjct: 152 VLCEGKQLHCHST---KLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWAT 208

Query: 221 --------DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC 272
                   D   EA+  F +M     KPN  T   VL AC     +  AK  H    +T 
Sbjct: 209 MIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETG 268

Query: 273 YEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFC 332
                 +  AL+D+Y K G    AR +F +MP+K++  W+ MI  + +     +A+ LF 
Sbjct: 269 IGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFN 328

Query: 333 RMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCG 392
            M+ + V  ++ T  S+L AC  +  L+LG  +H  + +  +  DV +  AL+D+YAKCG
Sbjct: 329 EMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCG 388

Query: 393 RMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLR 452
            +E+++ +F E P+++ +TW  +IVG    G+  KA+ +F +M   +V    +T+  VL 
Sbjct: 389 SIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLA 448

Query: 453 ACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS 512
           AC+    +  G               +   N++ + Y    SI     + DM+       
Sbjct: 449 ACSHAGLVNEG---------------IAYFNSMPNKYGIQPSIEHYGCMVDML------- 486

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
                      G +  + +  DL+Q     P+    VG+LSAC   G L   E   + ++
Sbjct: 487 -----------GRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLI 535



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 84/174 (48%), Gaps = 10/174 (5%)

Query: 451 LRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYA--KCGSITDARLVFDMMNDW 508
           L  C +++ L+   Q+H   ++    +D   A+ ++   A    GS+  ARLVF+ + + 
Sbjct: 47  LEKCTTMSQLK---QIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNP 103

Query: 509 NEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYF 568
              + N++I GY+   L  + +  + LM  +G  P+  TF  +  +C  G L E  + + 
Sbjct: 104 TTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSC--GVLCEGKQLHC 161

Query: 569 KSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
            S    +  +  I++  +++++    G L  A K+ + +    SV+ W  ++GA
Sbjct: 162 HSTKLGFASDAYIQN--TLMNMYSNCGCLVSARKVFDKM-VNKSVVSWATMIGA 212


>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 627

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 245/599 (40%), Positives = 373/599 (62%), Gaps = 16/599 (2%)

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           N   +EAL    +M  +G +     +  +L ACL    +R  +  H   +KT Y    Y+
Sbjct: 32  NGRLQEAL---LEMVMLGPEIGFHCYDALLNACLDKRALREGQRVHAHMIKTRYLPATYL 88

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
              LL  Y K   + +AR++ +EMP+K+V+ W+ MI+RY+QT  S +A+ +F  M ++  
Sbjct: 89  RTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDG 148

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
            PN+FTF +VL +C    GL LG QIH L+V+    S +FV ++L+D+YAK G++E + E
Sbjct: 149 KPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEARE 208

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +F   P+R+ V+   +I GY QLG   +A+ MF ++  E +    VTY+S+L A + LA 
Sbjct: 209 IFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLAL 268

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
           L+ G Q HC  ++       V+ N+LIDMY+KCG+++ A+ +FD M +   +SWNAM+ G
Sbjct: 269 LDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVG 328

Query: 520 YSMHGLSAEVLKVFDLMQ-QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN-YGI 577
           YS HGL  EVL++F LM+ ++  +P+ +T + VLS CS+G + + G + +  MVA  YGI
Sbjct: 329 YSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGI 388

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQ 637
           +P  EHY  +V +LGRAG +D+A + I+ +P +P+  +  +LLGAC +H +V+IG     
Sbjct: 389 KPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGEYVGH 448

Query: 638 HILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFR 686
            +++ EPE+   +V+LSN+YA A  WE           KA +KEPG SWI+++  +HYF 
Sbjct: 449 RLIEIEPENAGNYVILSNLYASAGRWEDVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFH 508

Query: 687 AGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFA 746
           A D +H     +   ++ +++K ++AGY+PD+S VL DV E++KE+ L  HSEKLAL F 
Sbjct: 509 ANDRTHPRREEVLAKMKEISIKMKQAGYVPDISCVLYDVDEEQKEKMLLGHSEKLALTFG 568

Query: 747 LFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           L       PIR+ KNLRICVDCH   KI SK+ +RE+ +RD +RFH    G CSCGD+W
Sbjct: 569 LITTGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVKGICSCGDYW 627



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/339 (32%), Positives = 177/339 (52%), Gaps = 19/339 (5%)

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF--------------- 223
           V A + K  +    ++ T L+  +  C C+E ARKV D +                    
Sbjct: 73  VHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGH 132

Query: 224 -EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
             EAL+ F++M     KPN FTFA VL +C+    + + K  HG  +K  Y+  ++V  +
Sbjct: 133 SSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSS 192

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           LLD+Y K+G+I  AR IFE +P++DV+  + +IA YAQ  L  +A+E+F R++   + PN
Sbjct: 193 LLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPN 252

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
             T+ S+L A + +  LD G Q H  V+R  L     + N+L+D+Y+KCG +  +  LF 
Sbjct: 253 YVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFD 312

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ-VPATEVTYSSVLRACASLAALE 461
             P+R  ++WN M+VGY + G   + + +F  M +E+ V    VT  +VL  C+     +
Sbjct: 313 NMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMED 372

Query: 462 PGMQVHCLTVKANYDM--DVVVANALIDMYAKCGSITDA 498
            G+ ++   V   Y +  D      ++DM  + G I +A
Sbjct: 373 TGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEA 411



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 190/397 (47%), Gaps = 27/397 (6%)

Query: 36  TQQCSNSTTTPITFSV----SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDL 91
           +Q CSN         +     E   H Y   L +C+    L+    +H  ++K       
Sbjct: 27  SQLCSNGRLQEALLEMVMLGPEIGFHCYDALLNACLDKRALREGQRVHAHMIKTRYLPAT 86

Query: 92  FATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHRE 151
           +    LL  Y K + L DA K+ DEMPE+N +S+   I  Y+ +    EA+ +F+ + R 
Sbjct: 87  YLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRS 146

Query: 152 GHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFA 211
             + N F F   L   +      L   +   + K  +DS+ FVG++L+D ++  G +E A
Sbjct: 147 DGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEA 206

Query: 212 RKVFDGLFN----DCF------------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGL 255
           R++F+ L       C             EEAL  F ++++ G +PN  T+A +L A  GL
Sbjct: 207 REIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGL 266

Query: 256 DTIRVAKSAHGCALKTCYEMDLYVAV--ALLDLYTKSGEISNARRIFEEMPKKDVIPWSF 313
             +   K AH   L+   E+  Y  +  +L+D+Y+K G +S A+R+F+ MP++  I W+ 
Sbjct: 267 ALLDHGKQAHCHVLRR--ELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNA 324

Query: 314 MIARYAQTDLSIDAVELFCRMR-QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV-- 370
           M+  Y++  L  + +ELF  MR +  V P+  T ++VL  C+  +  D G  I+  +V  
Sbjct: 325 MLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAG 384

Query: 371 RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKR 407
             G+  D      ++D+  + GR++ + E     P +
Sbjct: 385 EYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 421


>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Vitis vinifera]
          Length = 709

 Score =  484 bits (1245), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 241/623 (38%), Positives = 367/623 (58%), Gaps = 40/623 (6%)

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
           F  +L+FF QM A G  P++  F  VLK+C  +  +R  +S HGC ++     DLY   A
Sbjct: 87  FLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNA 146

Query: 283 LLDLYTK---------------SGEISNA--------------RRIFEEMPKKDVIPWSF 313
           L+++Y+K                G+ S+               R++FE MPK+D++ W+ 
Sbjct: 147 LMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNT 206

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
           +I+  AQ  +  DA+ +   M  A + P+ FT  SVL   A    L  G +IH   +R G
Sbjct: 207 VISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNG 266

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
             +DVF+ ++L+D+YAKC R+++S  +F   P+ + ++WN++I G VQ G   + +  F 
Sbjct: 267 YDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQ 326

Query: 434 KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCG 493
           +ML  ++    V++SS++ ACA L  L  G Q+H   +++ +D +V +A+AL+DMYAKCG
Sbjct: 327 QMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCG 386

Query: 494 SITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLS 553
           +I  AR +FD M  ++ VSW AMI GY++HG + + + +F  M+  G +PN + F+ VL+
Sbjct: 387 NIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLT 446

Query: 554 ACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSV 613
           ACS+ GL+++   YF SM  +Y I P +EHY ++  LLGR G L++A + I  +  +P+ 
Sbjct: 447 ACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTG 506

Query: 614 MIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW---------- 663
            +W  LL AC +H N+E+    ++ +   +P++   +VLLSNIY+ A  W          
Sbjct: 507 SVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAM 566

Query: 664 -EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVL 722
            +K   K+P  SWIE +  VH F AGD SH   + I   L+ L  +  + GY+ D + VL
Sbjct: 567 RDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDTTEVL 626

Query: 723 RDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQRE 782
            DV E++K   L  HSE+LA+ F +   P  + IR+ KNLR+CVDCHTA K ISKIV RE
Sbjct: 627 HDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTATKFISKIVGRE 686

Query: 783 IIIRDVHRFHHFQDGCCSCGDFW 805
           I++RD  RFHHF+DG CSCGDFW
Sbjct: 687 IVVRDNSRFHHFKDGKCSCGDFW 709



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 123/512 (24%), Positives = 231/512 (45%), Gaps = 51/512 (9%)

Query: 61  TSLQSCIQNDDLQTAMTIHCQVLKKG-NCLDLFATNVLLNVYVKLNRLPDATKLFDEMPE 119
           T LQ+         A  +H Q+L+       L +T  +L++Y  LN L D+  +F+ +P 
Sbjct: 10  TLLQNPSSVKSKSQAKQLHAQILRTSLPSPSLLST--ILSIYSNLNLLHDSLLIFNSLPS 67

Query: 120 R-NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
              T+++ + I+ YT    F+ ++  F  +   G   +   F + LK    M        
Sbjct: 68  PPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGES 127

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFA---RKVFD-GLFNDCF----------- 223
           V  C+ +LG   + +   AL++ +S    +E     +KVFD G  +D +           
Sbjct: 128 VHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLG 187

Query: 224 ------------------------------EEALNFFSQMRAVGFKPNNFTFAFVLKACL 253
                                         E+AL    +M     +P++FT + VL    
Sbjct: 188 SLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFA 247

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSF 313
               +   K  HG A++  Y+ D+++  +L+D+Y K   + ++ R+F  +P+ D I W+ 
Sbjct: 248 EYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNS 307

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
           +IA   Q  +  + ++ F +M  A + PN  +F S++ ACA +  L LG Q+H  ++R  
Sbjct: 308 IIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSR 367

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
              +VF+++AL+D+YAKCG +  +  +F +    + V+W  MI+GY   G    A+ +F 
Sbjct: 368 FDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFK 427

Query: 434 KMLEEQVPATEVTYSSVLRACASLAALEPGMQ-VHCLTVKANYDMDVVVANALIDMYAKC 492
           +M  E V    V + +VL AC+    ++   +  + +T        +    A+ D+  + 
Sbjct: 428 RMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRV 487

Query: 493 GSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
           G + +A   + DM  +     W+ +++   +H
Sbjct: 488 GRLEEAYEFISDMHIEPTGSVWSTLLAACRVH 519



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 102/391 (26%), Positives = 185/391 (47%), Gaps = 46/391 (11%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT---KLFD 115
           + + L+SC    DL+   ++H  +++ G   DL+  N L+N+Y K   L +     K+FD
Sbjct: 109 FPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFD 168

Query: 116 E--------------------------MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           E                          MP+R+ +S+ T I G   +    +A+ +   + 
Sbjct: 169 EGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMG 228

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
                 + F  ++ L +            +     + G+D++ F+G++LID ++ C  V+
Sbjct: 229 NADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVD 288

Query: 210 FARKVF------DGLF----------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL 253
            + +VF      DG+           N  F+E L FF QM     KPN+ +F+ ++ AC 
Sbjct: 289 DSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACA 348

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSF 313
            L T+ + K  HG  +++ ++ ++++A AL+D+Y K G I  AR IF++M   D++ W+ 
Sbjct: 349 HLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTA 408

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRV 372
           MI  YA    + DA+ LF RM    V PN   F++VL AC+    +D      +S+    
Sbjct: 409 MIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDY 468

Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
            ++  +    A+ D+  + GR+E + E  ++
Sbjct: 469 RIIPGLEHYAAVADLLGRVGRLEEAYEFISD 499



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 161/335 (48%), Gaps = 31/335 (9%)

Query: 261 AKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK-DVIPWSFMIARYA 319
           AK  H   L+T       ++  +L +Y+    + ++  IF  +P     + W  +I  Y 
Sbjct: 24  AKQLHAQILRTSLPSPSLLST-ILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYT 82

Query: 320 QTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVF 379
              L + ++  F +M  +   P+   F SVL++C  M+ L  G  +H  ++R+G+  D++
Sbjct: 83  SHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLY 142

Query: 380 VSNALMDVYAKCGRMENS-----------------------------VELFAESPKRNHV 410
             NALM++Y+K   +E                                ++F   PKR+ V
Sbjct: 143 TCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIV 202

Query: 411 TWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLT 470
           +WNT+I G  Q G    A++M  +M    +     T SSVL   A    L  G ++H   
Sbjct: 203 SWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYA 262

Query: 471 VKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVL 530
           ++  YD DV + ++LIDMYAKC  + D+  VF M+   + +SWN++I+G   +G+  E L
Sbjct: 263 IRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGL 322

Query: 531 KVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE 565
           K F  M     +PN+++F  ++ AC++   L  G+
Sbjct: 323 KFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGK 357



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 71/312 (22%), Positives = 133/312 (42%), Gaps = 34/312 (10%)

Query: 27  GLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKG 86
           G+   A +  ++  N+   P +F++S        + L    +  +L     IH   ++ G
Sbjct: 215 GMHEDALMMVREMGNADLRPDSFTLS--------SVLPIFAEYVNLLKGKEIHGYAIRNG 266

Query: 87  NCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFS 146
              D+F  + L+++Y K  R+ D+ ++F  +P+ + IS+ + I G   +  F E +  F 
Sbjct: 267 YDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQ 326

Query: 147 TLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCG 206
            +     + N  +F++ +     +    L   +   + +   D N F+ +AL+D ++ CG
Sbjct: 327 QMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCG 386

Query: 207 CVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLK 250
            +  AR +FD +                 +    +A++ F +M   G KPN   F  VL 
Sbjct: 387 NIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLT 446

Query: 251 AC--LGL-DTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM---P 304
           AC   GL D      ++     +    ++ Y AVA  DL  + G +  A     +M   P
Sbjct: 447 ACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVA--DLLGRVGRLEEAYEFISDMHIEP 504

Query: 305 KKDVIPWSFMIA 316
              V  WS ++A
Sbjct: 505 TGSV--WSTLLA 514


>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
          Length = 624

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 234/577 (40%), Positives = 353/577 (61%), Gaps = 12/577 (2%)

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           P    +   + AC     +  A+  HG    + +E D ++  +L+ LY K G +  A ++
Sbjct: 49  PTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKV 108

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL 359
           F++M KKD++ W+ +IA YAQ D+  +A+ L   M +    PN FTF S+L+A       
Sbjct: 109 FDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADS 168

Query: 360 DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGY 419
            +G QIH+L V+     DV+V +AL+D+YA+CG+M+ +  +F +   +N V+WN +I G+
Sbjct: 169 GIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGF 228

Query: 420 VQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDV 479
            + G+   A+++F++M      AT  TYSS+    A + ALE G  VH   VK+   +  
Sbjct: 229 ARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTA 288

Query: 480 VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
            V N ++DMYAK GS+ DAR VF+ + + + V+WN+M++ ++ +GL  E +  F+ M++ 
Sbjct: 289 FVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKS 348

Query: 540 GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDK 599
           G   N +TF+ +L+ACS+GGL+++G+ YF  M+  Y +EP IEHY ++V LLGRAG L+ 
Sbjct: 349 GIYLNQITFLCILTACSHGGLVKEGKHYF-DMIKEYNLEPEIEHYVTVVDLLGRAGLLNY 407

Query: 600 AAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAM 659
           A   I  +P +P+  +W ALL AC +H N ++G+ +A H+   +P+D    VLL NIYA 
Sbjct: 408 ALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYAS 467

Query: 660 ARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMK 708
              W+ AA            KEP  SW+E    VH F A D +H     I  M + ++MK
Sbjct: 468 TGHWDAAARVRKMMKATGVKKEPACSWVEIGNSVHMFVANDDTHPRAEEIYKMWDEISMK 527

Query: 709 SRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDC 768
            RK GY+PD+  VL  V E E+E  L  HSEK+ALAFAL +MP  + IRI+KN+RIC DC
Sbjct: 528 IRKEGYVPDMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRIMKNIRICGDC 587

Query: 769 HTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           H+A K ISK+ +REI++RD +RFHHF +G CSCGD+W
Sbjct: 588 HSAFKYISKVFEREIVVRDTNRFHHFSNGSCSCGDYW 624



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 178/363 (49%), Gaps = 16/363 (4%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           Y   + +C Q+ +L  A  IH  +       D F  N L+++Y K   + +A K+FD+M 
Sbjct: 54  YHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMR 113

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
           +++ +S+ + I GY  +    EA+GL   + +   + N F F + LK   +   + +   
Sbjct: 114 KKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQ 173

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF-------- 223
           + A   K     + +VG+AL+D ++ CG ++ A  VFD L       +N           
Sbjct: 174 IHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGD 233

Query: 224 -EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
            E AL  F++M+  GF+  +FT++ +     G+  +   K  H   +K+  ++  +V   
Sbjct: 234 GETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNT 293

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           +LD+Y KSG + +AR++FE +  KD++ W+ M+  +AQ  L  +AV  F  MR++ +  N
Sbjct: 294 MLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLN 353

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           Q TF+ +L AC+    +  G     ++    L  ++     ++D+  + G +  ++    
Sbjct: 354 QITFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIF 413

Query: 403 ESP 405
           + P
Sbjct: 414 KMP 416



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 150/284 (52%), Gaps = 2/284 (0%)

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           +AP    + + + ACA  + LD   +IH  +       D F+ N+L+ +Y KCG +  + 
Sbjct: 47  LAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAH 106

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
           ++F +  K++ V+W ++I GY Q     +A+ +   ML+ +      T++S+L+A  + A
Sbjct: 107 KVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYA 166

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
               G Q+H L VK ++  DV V +AL+DMYA+CG +  A  VFD ++  N VSWNA+IS
Sbjct: 167 DSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALIS 226

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           G++  G     L VF  MQ+ G+   + T+  + S  +  G LEQG+     MV +    
Sbjct: 227 GFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKL 286

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
                 T M+ +  ++G +  A K+ E +     ++ W ++L A
Sbjct: 287 TAFVGNT-MLDMYAKSGSMIDARKVFERV-LNKDLVTWNSMLTA 328



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 92/352 (26%), Positives = 171/352 (48%), Gaps = 17/352 (4%)

Query: 189 DSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQ 232
           + +AF+  +LI  +  CG V  A KVFD +                 ND   EA+     
Sbjct: 83  EGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPG 142

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           M    FKPN FTFA +LKA        +    H  A+K  +  D+YV  ALLD+Y + G+
Sbjct: 143 MLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGK 202

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           +  A  +F+++  K+ + W+ +I+ +A+      A+ +F  M++       FT+ S+   
Sbjct: 203 MDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSG 262

Query: 353 CATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTW 412
            A +  L+ G  +H+ +V+       FV N ++D+YAK G M ++ ++F     ++ VTW
Sbjct: 263 LAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTW 322

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
           N+M+  + Q G   +A+  F +M +  +   ++T+  +L AC+    ++ G     +  +
Sbjct: 323 NSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFDMIKE 382

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARL-VFDMMNDWNEVSWNAMISGYSMH 523
            N + ++     ++D+  + G +  A + +F M  +     W A+++   MH
Sbjct: 383 YNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMH 434



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 118/266 (44%), Gaps = 16/266 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  ++A+ L++     D      IH   +K     D++  + LL++Y +  ++  AT +F
Sbjct: 151 NGFTFASLLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVF 210

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D++  +N +S+   I G+        A+ +F+ + R G E   F +++    L  +G  E
Sbjct: 211 DKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALE 270

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF----------- 223
               V A + K      AFVG  ++D ++  G +  ARKVF+ + N              
Sbjct: 271 QGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFA 330

Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                +EA++ F +MR  G   N  TF  +L AC     ++  K       +   E ++ 
Sbjct: 331 QYGLGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIE 390

Query: 279 VAVALLDLYTKSGEISNARRIFEEMP 304
             V ++DL  ++G ++ A     +MP
Sbjct: 391 HYVTVVDLLGRAGLLNYALVFIFKMP 416



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 89/183 (48%), Gaps = 4/183 (2%)

Query: 439 QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDA 498
           ++  T   Y + + ACA    L+   ++H     + ++ D  + N+LI +Y KCGS+ +A
Sbjct: 46  ELAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEA 105

Query: 499 RLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNG 558
             VFD M   + VSW ++I+GY+ + + AE + +   M +  ++PN  TF  +L A   G
Sbjct: 106 HKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAA--G 163

Query: 559 GLLEQG-EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWR 617
              + G      ++         +   ++++ +  R G +D A  + + +  +  V  W 
Sbjct: 164 AYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVS-WN 222

Query: 618 ALL 620
           AL+
Sbjct: 223 ALI 225


>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 694

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 243/649 (37%), Positives = 390/649 (60%), Gaps = 30/649 (4%)

Query: 186 LGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNF 229
           LG   + F+ T LI A S  G + FAR+VFD L                 N+ F++AL  
Sbjct: 47  LGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLM 106

Query: 230 FSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK 289
           +S+M+     P++FTF  +LKAC GL  +++ +  H    +  +E D++V   L+ LY K
Sbjct: 107 YSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAK 166

Query: 290 SGEISNARRIFE--EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFV 347
              +  AR +FE   +P++ ++ W+ +++ YAQ    ++A+E+F +MR+  V P+    V
Sbjct: 167 CRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALV 226

Query: 348 SVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKR 407
           SVL A   ++ L+ G  IH+ V+++GL ++  +  +L  +YAKCG++  +  LF +    
Sbjct: 227 SVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSP 286

Query: 408 NHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVH 467
           N + WN MI GY + G    A+ +F +M+ + V    ++ +S + ACA + +LE    + 
Sbjct: 287 NLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMD 346

Query: 468 CLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSA 527
               +++Y  DV +++ALIDM+AKCGS+  AR VFD   D + V W+AMI GY +HG + 
Sbjct: 347 EYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAR 406

Query: 528 EVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSM 587
           E + ++  M++ G  PN++TF+G+L AC++ G++ +G  +F  M A++ I P  +HY  +
Sbjct: 407 EAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRM-ADHKINPQQQHYACI 465

Query: 588 VSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDE 647
           + LLGRAGHLD+A ++I+ +P QP V +W ALL AC  H +VE+G+ +AQ +   +P + 
Sbjct: 466 IDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQLFSIDPSNT 525

Query: 648 ATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMN 696
             +V LSN+YA AR W           EK  +K+ G SW+E +G +  FR GD SH    
Sbjct: 526 GHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEGFRVGDKSHPRYE 585

Query: 697 IIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPI 756
            I   +EW+  + ++ G++ +  A L D+ ++E E  L  HSE++ +A+ L   P  + +
Sbjct: 586 EIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERITIAYGLISTPQGTTL 645

Query: 757 RIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           RI KNLR CV+CH A K+ISK+V REI++RD +RFHHF+DG CSCGD+W
Sbjct: 646 RITKNLRACVNCHAATKLISKLVGREIVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 132/499 (26%), Positives = 231/499 (46%), Gaps = 23/499 (4%)

Query: 45  TPITFSVSEFNSHS-YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVK 103
           +P  ++ S  +S S YA+ + S      L+    IH ++L  G     F    L++    
Sbjct: 9   SPFLYTNSGIHSDSFYASLIDSSTHKAQLRQ---IHARLLVLGLQFSGFLITKLIHASSS 65

Query: 104 LNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAF 163
              +  A ++FD++P      +   I+GY+ ++ F +A+ ++S +       + F F   
Sbjct: 66  YGDITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHL 125

Query: 164 LKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----- 218
           LK    +   ++   V A V++LG +++ FV   LI  ++ C  +  AR VF+GL     
Sbjct: 126 LKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPER 185

Query: 219 -------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAH 265
                         N    EAL  FSQMR +  KP+      VL A   L  +   +S H
Sbjct: 186 TIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIH 245

Query: 266 GCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSI 325
              +K   E +  + ++L  +Y K G+++ A+ +F++M   ++I W+ MI+ YA+   + 
Sbjct: 246 ASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAK 305

Query: 326 DAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALM 385
           DA++LF  M    V P+  +  S + ACA +  L+    +   V R     DVF+S+AL+
Sbjct: 306 DAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALI 365

Query: 386 DVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEV 445
           D++AKCG +E +  +F  +  R+ V W+ MIVGY   G+  +A+ ++  M  + V   +V
Sbjct: 366 DMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDV 425

Query: 446 TYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMM 505
           T+  +L AC     +  G            +        +ID+  + G +  A  V   M
Sbjct: 426 TFLGLLIACNHSGMVREGWWFFNRMADHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCM 485

Query: 506 NDWNEVS-WNAMISGYSMH 523
                V+ W A++S    H
Sbjct: 486 PVQPGVTVWGALLSACKKH 504



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 136/261 (52%), Gaps = 4/261 (1%)

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
           QIH+ ++ +GL    F+   L+   +  G +  + ++F + P+     WN +I GY +  
Sbjct: 39  QIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRNN 98

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN 483
               A++M+SKM   +V     T+  +L+AC  L+ L+ G  VH    +  ++ DV V N
Sbjct: 99  HFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQN 158

Query: 484 ALIDMYAKCGSITDARLVFD--MMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW 541
            LI +YAKC  +  AR VF+   + +   VSW A++S Y+ +G   E L++F  M++   
Sbjct: 159 GLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDV 218

Query: 542 RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAA 601
           +P+ +  V VL+A +    LEQG +   S V   G+E   +   S+ ++  + G +  A 
Sbjct: 219 KPDCVALVSVLNAFTCLQDLEQGRSIHAS-VMKMGLETEPDLLISLNTMYAKCGQVATAK 277

Query: 602 KLIEGIPFQPSVMIWRALLGA 622
            L + +   P++++W A++  
Sbjct: 278 ILFDKMK-SPNLILWNAMISG 297


>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Vitis vinifera]
          Length = 881

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 272/790 (34%), Positives = 418/790 (52%), Gaps = 33/790 (4%)

Query: 49  FSVSEFNSHSYATS--LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNR 106
            SV+E    ++     +++C    DL     IH    K     D+F  N L+ +Y K   
Sbjct: 92  ISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGL 151

Query: 107 LPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV 166
           + +A K+F+ MPERN +S+ + I G++ +    E+   F  +        P   T    +
Sbjct: 152 VEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVL 211

Query: 167 LVSMGWAELCP--CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-------- 216
            V  G  ++     V     KLG +    V  +LID +S C  +  A+ +FD        
Sbjct: 212 PVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIV 271

Query: 217 ------GLFNDCFEEALNFF----SQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHG 266
                 G +    +    F+     Q      K + FT   VL  CL    ++  K  HG
Sbjct: 272 SWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHG 331

Query: 267 CALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSID 326
            + +   + +  VA A +  YT+ G + ++ R+F+ M  K V  W+ ++  YAQ      
Sbjct: 332 YSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRK 391

Query: 327 AVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMD 386
           A++L+ +M  + + P+ FT  S+L AC+ M+ L  G +IH   +R GL  D F+  +L+ 
Sbjct: 392 ALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLS 451

Query: 387 VYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVT 446
           +Y  CG+   +  LF     R+ V+WN MI GY Q G   +A+ +F +ML + +   E+ 
Sbjct: 452 LYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIA 511

Query: 447 YSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN 506
              V  AC+ L+AL  G ++HC  +KA+   D+ V++++IDMYAK G I  ++ +FD + 
Sbjct: 512 IMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLR 571

Query: 507 DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEA 566
           + +  SWN +I+GY +HG   E L++F+ M + G +P++ TF G+L ACS+ GL+E G  
Sbjct: 572 EKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLE 631

Query: 567 YFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH 626
           YF  M+  + IEP +EHYT +V +LGRAG +D A +LIE +P  P   IW +LL +C IH
Sbjct: 632 YFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIH 691

Query: 627 NNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEK-----------AASKEPGLSW 675
            N+ +G   A  +L+ EPE    +VL+SN++A +  W+               K+ G SW
Sbjct: 692 GNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSW 751

Query: 676 IENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLW 735
           IE  G VH F  GD    ++  +R     L +K    GY PD  +VL D+ E++K   L 
Sbjct: 752 IEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEEDKIGILR 811

Query: 736 VHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQ 795
            HSEKLA++F L       P+R+ KNLRIC DCH A K ISK+V R+I++RD  RFHHF+
Sbjct: 812 GHSEKLAISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNKRFHHFR 871

Query: 796 DGCCSCGDFW 805
           DG CSCGD+W
Sbjct: 872 DGICSCGDYW 881



 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 153/588 (26%), Positives = 272/588 (46%), Gaps = 26/588 (4%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGN-CLDLFATNVLLNVYVKLNRLPDATKLFDEMPERN 121
           LQ+C Q  D++    +H  V      C D      ++ +Y       D+  +FD++  +N
Sbjct: 5   LQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKN 64

Query: 122 TISFVTTIQGYTVSSQFVEAVGLFSTL-HREGHELNPFAFTAFLKVLVSMGWAELCPCVF 180
              +   +  YT +  F +A+ +FS L     H+ + F     +K    +    L   + 
Sbjct: 65  LFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIH 124

Query: 181 ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFE 224
               K+   S+ FVG ALI  +  CG VE A KVF+ +                 N   +
Sbjct: 125 GMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQ 184

Query: 225 EALNFFSQMRAVG---FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
           E+ N F +M  VG   F P+  T   VL  C G + I    + HG A+K     +L V  
Sbjct: 185 ESFNAFREM-LVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNN 243

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR--QAFV 339
           +L+D+Y+K   +S A+ +F++  KK+++ W+ MI  YA+ +       L  +M+   A +
Sbjct: 244 SLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKM 303

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
             ++FT ++VL  C     L    ++H    R GL S+  V+NA +  Y +CG + +S  
Sbjct: 304 KADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSER 363

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +F     +   +WN ++ GY Q  +  KA+ ++ +M +  +     T  S+L AC+ + +
Sbjct: 364 VFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKS 423

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
           L  G ++H   ++    +D  +  +L+ +Y  CG    A+++FD M   + VSWN MI+G
Sbjct: 424 LHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAG 483

Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
           YS +GL  E + +F  M   G +P  +  + V  ACS    L  G+      +  +  E 
Sbjct: 484 YSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTED 543

Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
            I   +S++ +  + G +  + ++ + +  +  V  W  ++    IH 
Sbjct: 544 -IFVSSSIIDMYAKGGCIGLSQRIFDRLR-EKDVASWNVIIAGYGIHG 589



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/319 (32%), Positives = 180/319 (56%), Gaps = 12/319 (3%)

Query: 246 AFVLKACLGLDTIRVAKSAHG-CALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
             +L+AC     I V +  H   +  T +  D  +   ++ +Y+  G  S++R +F+++ 
Sbjct: 2   GVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLR 61

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV-APNQFTFVSVLQACATMEGLDLGN 363
           +K++  W+ +++ Y + +L  DA+ +F  +       P+ FT   V++ACA +  L LG 
Sbjct: 62  RKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQ 121

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
            IH +  ++ L+SDVFV NAL+ +Y KCG +E +V++F   P+RN V+WN++I G+ + G
Sbjct: 122 IIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENG 181

Query: 424 EVGKAMIMFSKML--EEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVV 481
            + ++   F +ML  EE       T  +VL  CA    +E GM VH L VK   + +++V
Sbjct: 182 FLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMV 241

Query: 482 ANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ--- 538
            N+LIDMY+KC  +++A+L+FD  +  N VSWN+MI GY+      +V + F L+Q+   
Sbjct: 242 NNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYARE---EDVCRTFYLLQKMQT 298

Query: 539 --RGWRPNNLTFVGVLSAC 555
                + +  T + VL  C
Sbjct: 299 EDAKMKADEFTILNVLPVC 317


>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 638

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 243/587 (41%), Positives = 370/587 (63%), Gaps = 13/587 (2%)

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
           QM  +G +     +  +L  C+    IR  +  H   +KTCY   +Y+   L+ LY K  
Sbjct: 52  QMAILGREVKFEGYDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCD 111

Query: 292 EISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQ 351
            + +AR +F+EMP+++V+ W+ MI+ Y+Q   + +A+ LF  M ++   PN FTF ++L 
Sbjct: 112 CLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILT 171

Query: 352 ACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
           +C    G + G QIHS+ ++    S +FV ++L+D+YAK GR+ ++  +F   P+R+ V 
Sbjct: 172 SCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVA 231

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
              +I GY Q+G   +A+ +F ++  E + +  VTY+SVL A + LAAL  G QVH   +
Sbjct: 232 CTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVL 291

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
           ++     VV+ N+LIDMY+KCG++  AR +FD M +   +SWNAM+ GYS HG++ EVL+
Sbjct: 292 RSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLE 351

Query: 532 VFDLMQQRGW-RPNNLTFVGVLSACSNGGLLEQGEAYFKSMV-ANYGIEPCIEHYTSMVS 589
           +F LM++    +P+++T++ VLS CS+G L + G   F +MV    GIEP I HY  +V 
Sbjct: 352 LFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVD 411

Query: 590 LLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEAT 649
           LLGRAG +++A   I+ +PF P+  IW +LLG+C +H++VEIG +  Q +L+ EPE+   
Sbjct: 412 LLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGN 471

Query: 650 HVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNII 698
           +V+LSN+YA A  W           EKA +KEPG SW+E   +VH F A D +H     +
Sbjct: 472 YVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEV 531

Query: 699 RGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRI 758
              ++ L++K ++ GY+PDLS VL DV E++KE+ L  HSEKLALAF L   P  + IR+
Sbjct: 532 ANKVKELSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRV 591

Query: 759 IKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           IKNLRICVDCH+  K +S++  R +I+RD +RFH+   G CSCGD+W
Sbjct: 592 IKNLRICVDCHSFAKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 638



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 185/356 (51%), Gaps = 26/356 (7%)

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFE----------------EALNFFSQMR 234
           + ++ T LI  ++ C C+  AR +FD +                      EALN F +M 
Sbjct: 96  SVYLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEML 155

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
               +PN+FTFA +L +C G       +  H  A+K  YE  ++V  +LLD+Y KSG I 
Sbjct: 156 RSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRIC 215

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
           +A  +F  +P++DV+  + +I+ YAQ  L  +A++LF +++   +  N  T+ SVL A +
Sbjct: 216 DAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALS 275

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
            +  L+ G Q+HS V+R G  S V + N+L+D+Y+KCG +  +  +F   P+R  ++WN 
Sbjct: 276 GLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNA 335

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEE-QVPATEVTYSSVLRACASLAALEPGMQV--HCLTV 471
           M+VGY + G   + + +F  M EE +V    +TY +VL  C+     + G+++  + +  
Sbjct: 336 MLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNG 395

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS----WNAMISGYSMH 523
           K   + D+     ++D+  + G + +A   FD +     V     W +++    +H
Sbjct: 396 KDGIEPDIGHYGCVVDLLGRAGRVEEA---FDFIKKMPFVPTAAIWGSLLGSCRVH 448



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 190/405 (46%), Gaps = 20/405 (4%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E     Y + L  C+    ++    +H  ++K      ++    L+ +Y K + L DA  
Sbjct: 59  EVKFEGYDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARG 118

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +FDEMP+RN +S+   I  Y+      EA+ LF  + R   E N F F   L        
Sbjct: 119 MFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLG 178

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN------------ 220
            E    + +   K  ++S+ FVG++L+D ++  G +  A  VF  L              
Sbjct: 179 FETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISG 238

Query: 221 ----DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
                  EEAL  F Q++  G   N+ T+A VL A  GL  +   K  H   L++     
Sbjct: 239 YAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSY 298

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           + +  +L+D+Y+K G +  ARRIF+ MP++  I W+ M+  Y++  ++ + +ELF  MR+
Sbjct: 299 VVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMRE 358

Query: 337 A-FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV--RVGLLSDVFVSNALMDVYAKCGR 393
              V P+  T+++VL  C+  +  D+G +I   +V  + G+  D+     ++D+  + GR
Sbjct: 359 ENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGR 418

Query: 394 MENSVELFAESP-KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
           +E + +   + P       W +++       +V   +I+  K+LE
Sbjct: 419 VEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLE 463



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 119/279 (42%), Gaps = 29/279 (10%)

Query: 50  SVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD 109
           S +E N  ++AT L SC  +   +T   IH   +K+     +F  + LL++Y K  R+ D
Sbjct: 157 SDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICD 216

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A  +F  +PER+ ++    I GY       EA+ LF  L  EG   N   + + L  L  
Sbjct: 217 AHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSG 276

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-FNDCF----- 223
           +        V + V + G  S   +  +LID +S CG V +AR++FD +    C      
Sbjct: 277 LAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAM 336

Query: 224 ----------EEALNFFSQMRAVG-FKPNNFTFAFVLKAC-------LGLDTIRVAKSAH 265
                      E L  F  MR     KP++ T+  VL  C       +GL+      +  
Sbjct: 337 LVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNG- 395

Query: 266 GCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
               K   E D+     ++DL  ++G +  A    ++MP
Sbjct: 396 ----KDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMP 430


>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
 gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
          Length = 822

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 277/786 (35%), Positives = 434/786 (55%), Gaps = 77/786 (9%)

Query: 71  DLQTAMTIHCQVLKKGNCLDLFA--TNVLLNVYVKLNRLPDATKLFDEMPE-RNTISFVT 127
           DL+    +H ++L+ G+ LD  A   N LL +Y +   +  A  +FD M   R+ +S+  
Sbjct: 63  DLRLGRALHRRLLR-GDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTA 121

Query: 128 TIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC----- 182
                  +    E++ L   +   G  L P A+T             LC    AC     
Sbjct: 122 MASCLARNGAERESLLLIGEMLESG--LLPNAYT-------------LCAVAHACFPHEL 166

Query: 183 -----------VYKLGH-DSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------- 219
                      V+K+G   ++  VG+ALID  +  G +  ARKVFDGL            
Sbjct: 167 YCLVGGVVLGLVHKMGLWGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLI 226

Query: 220 -----NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
                 +C EEA+  F      GF+P+ +T + ++ AC  L ++R+    H  AL+  + 
Sbjct: 227 SRYVQGECAEEAVEIFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFA 286

Query: 275 MDLYVAVALLDLYTKSG---EISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVE-L 330
            D  V+  L+D+Y KS     +  A ++FE M K DVI W+ +I+ Y Q+ +  + V  L
Sbjct: 287 SDACVSCGLVDMYAKSNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVL 346

Query: 331 FCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAK 390
           F  M    + PN  T+ S+L+ACA +   D G Q+H+ V++    +   V NAL+ +YA+
Sbjct: 347 FGEMLNESIKPNHITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAE 406

Query: 391 CGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
            G ME +  +F +  +R+ ++  T           G+   +  ++    +  +  T++S+
Sbjct: 407 SGCMEEARRVFNQLYERSMISCITE----------GRDAPLDHRIGRMDMGISSSTFASL 456

Query: 451 LRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE 510
           + A AS+  L  G Q+H +T+KA +  D  V+N+L+ MY++CG + DA   F+ + D N 
Sbjct: 457 ISAAASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNV 516

Query: 511 VSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKS 570
           +SW +MISG + HG +   L +F  M   G +PN++T++ VLSACS+ GL+ +G+ YF+S
Sbjct: 517 ISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRS 576

Query: 571 MVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
           M  ++G+ P +EHY  MV LL R+G + +A + I  +P +   ++W+ LLGAC  H+N+E
Sbjct: 577 MQRDHGLIPRMEHYACMVDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIE 636

Query: 631 IGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQ 679
           +G ++A+++++ EP D A +VLLSN+YA A  W++ A           +KE GLSW+E +
Sbjct: 637 VGEIAAKNVIELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVE 696

Query: 680 GMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSE 739
              H FRAGDTSH     I G L+ L  + +  GY+PD S VL D+ ++ KE+YL  HSE
Sbjct: 697 NTTHEFRAGDTSHPRAQDIYGKLDTLVGEIKGMGYVPDTSIVLHDMSDELKEQYLLQHSE 756

Query: 740 KLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCC 799
           K+A+AF L       PIRI KNLR+C DCH+AIK +SK  +REII+RD +RFH  +DG C
Sbjct: 757 KIAVAFGLITTSAPKPIRIFKNLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGEC 816

Query: 800 SCGDFW 805
           SCG++W
Sbjct: 817 SCGEYW 822


>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
          Length = 624

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 234/577 (40%), Positives = 354/577 (61%), Gaps = 12/577 (2%)

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           P    +   + AC     +  A+  H     + +  D ++  +L+ +Y K   + +AR +
Sbjct: 49  PTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNV 108

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL 359
           F++M +KD++ W+ +IA YAQ D+ ++A+ L   M +    PN FTF S+L+A       
Sbjct: 109 FDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADS 168

Query: 360 DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGY 419
             G QIH+L V+ G   DV+V +AL+D+YA+CG+M+ +  +F +   +N V+WN +I G+
Sbjct: 169 GTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGF 228

Query: 420 VQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDV 479
            + G+   A++ F++ML     AT  TYSSV  + A L ALE G  VH   +K+   +  
Sbjct: 229 ARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTA 288

Query: 480 VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
            V N L+DMYAK GS+ DAR VFD +++ + V+WN+M++ ++ +GL  E +  F+ M++ 
Sbjct: 289 FVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKS 348

Query: 540 GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDK 599
           G   N +TF+ +L+ACS+GGL+++G+ YF+ M+  Y +EP I+HY ++V+LLGRAG L+ 
Sbjct: 349 GVYLNQITFLCILTACSHGGLVKEGKRYFE-MMKEYDLEPEIDHYVTVVALLGRAGLLNY 407

Query: 600 AAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAM 659
           A   I  +P +P+  +W ALL AC +H N ++G+ +A H+ + +P+D    VLL NIYA 
Sbjct: 408 ALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYAS 467

Query: 660 ARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMK 708
              W+ AA            KEP  SW+E +  VH F A D +H     I  M   ++ K
Sbjct: 468 TGQWDAAARVRMMMKTTGVKKEPACSWVEMENSVHMFVANDDTHPQAEEIYKMWGEISKK 527

Query: 709 SRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDC 768
            RK GY+PD+  VL  V + EKE  L  HSEKLALAFAL +MP  + IRI+KN+RIC DC
Sbjct: 528 IRKEGYVPDMDYVLLHVDDQEKEANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDC 587

Query: 769 HTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           H+A K ISK+  REI++RD +RFHHF  G CSCGD+W
Sbjct: 588 HSAFKYISKVFGREIVVRDTNRFHHFSSGSCSCGDYW 624



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 170/347 (48%), Gaps = 29/347 (8%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           Y + + +C Q+ +L+ A  IH  +       D F  N L+++Y K   + DA  +FD+M 
Sbjct: 54  YRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMR 113

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
            ++ +S+ + I GY  +   VEA+GL   + +   + N F F + LK   +   +     
Sbjct: 114 RKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQ 173

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF-------- 223
           + A   K G   + +VG+AL+D ++ CG ++ A  VFD L       +N           
Sbjct: 174 IHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGD 233

Query: 224 -EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
            E AL  F++M   GF+  +FT++ V  +   L  +   K  H   +K+  ++  +V   
Sbjct: 234 GESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNT 293

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           LLD+Y KSG + +AR++F+ +  KD++ W+ M+  +AQ  L  +AV  F  MR++ V  N
Sbjct: 294 LLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLN 353

Query: 343 QFTFVSVLQACA-------------TMEGLDLGNQIHSLVVRVGLLS 376
           Q TF+ +L AC+              M+  DL  +I   V  V LL 
Sbjct: 354 QITFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHYVTVVALLG 400



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 169/353 (47%), Gaps = 21/353 (5%)

Query: 190 SNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQM 233
            +AF+  +LI  +  C  V  AR VFD +                 ND   EA+     M
Sbjct: 84  GDAFLDNSLIHMYCKCRSVLDARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGM 143

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
               FKPN FTFA +LKA          +  H  A+K  +  D+YV  ALLD+Y + G++
Sbjct: 144 LKGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKM 203

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
             A  +F+++  K+ + W+ +I+ +A+      A+  F  M +       FT+ SV  + 
Sbjct: 204 DMATAVFDKLDSKNGVSWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSI 263

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
           A +  L+ G  +H+ V++       FV N L+D+YAK G M ++ ++F     ++ VTWN
Sbjct: 264 ARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWN 323

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
           +M+  + Q G   +A+  F +M +  V   ++T+  +L AC+    ++ G +     +  
Sbjct: 324 SMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRY--FEMMK 381

Query: 474 NYDMDVVVAN--ALIDMYAKCGSITDARL-VFDMMNDWNEVSWNAMISGYSMH 523
            YD++  + +   ++ +  + G +  A + +F M  +     W A+++   MH
Sbjct: 382 EYDLEPEIDHYVTVVALLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMH 434



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 125/227 (55%)

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           +AP    + S + ACA  + L+   +IH+ +       D F+ N+L+ +Y KC  + ++ 
Sbjct: 47  LAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDAR 106

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            +F +  +++ V+W ++I GY Q     +A+ +   ML+ +      T++S+L+A  + A
Sbjct: 107 NVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYA 166

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
               G Q+H L VK  +  DV V +AL+DMYA+CG +  A  VFD ++  N VSWNA+IS
Sbjct: 167 DSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALIS 226

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE 565
           G++  G     L  F  M + G+   + T+  V S+ +  G LEQG+
Sbjct: 227 GFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGK 273



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 16/214 (7%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  ++A+ L++     D  T   IH   +K G   D++  + LL++Y +  ++  AT +F
Sbjct: 151 NGFTFASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVF 210

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D++  +N +S+   I G+        A+  F+ + R G E   F +++    +  +G  E
Sbjct: 211 DKLDSKNGVSWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALE 270

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF----------- 223
               V A V K      AFVG  L+D ++  G +  ARKVFD + N              
Sbjct: 271 QGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFA 330

Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKAC 252
                +EA++ F +MR  G   N  TF  +L AC
Sbjct: 331 QYGLGKEAVSHFEEMRKSGVYLNQITFLCILTAC 364



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 103/221 (46%), Gaps = 6/221 (2%)

Query: 439 QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDA 498
           ++  T   Y S + ACA    LE   ++H     + +  D  + N+LI MY KC S+ DA
Sbjct: 46  ELAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDA 105

Query: 499 RLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNG 558
           R VFD M   + VSW ++I+GY+ + +  E + +   M +  ++PN  TF  +L A   G
Sbjct: 106 RNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAA--G 163

Query: 559 GLLEQGEA-YFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWR 617
              + G      ++    G    +   ++++ +  R G +D A  + + +  +  V  W 
Sbjct: 164 AYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVS-WN 222

Query: 618 ALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYA 658
           AL+       + E   ++   +L      EATH   S++++
Sbjct: 223 ALISGFARKGDGESALMTFAEML--RNGFEATHFTYSSVFS 261



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 50/112 (44%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E    +Y++   S  +   L+    +H  V+K    L  F  N LL++Y K   + DA K
Sbjct: 250 EATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARK 309

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFL 164
           +FD +  ++ +++ + +  +       EAV  F  + + G  LN   F   L
Sbjct: 310 VFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCIL 361


>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 260/691 (37%), Positives = 371/691 (53%), Gaps = 73/691 (10%)

Query: 187 GHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-----------------FNDCFEEALNF 229
           G D   F+G+ L++ +   GCVE AR++FD +                   D +EE +  
Sbjct: 40  GVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGD-YEETIKL 98

Query: 230 FSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK 289
           F  M   G +P++F F  V KAC  L   RV K  +   L   +E +  V  ++LD++ K
Sbjct: 99  FYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIK 158

Query: 290 SGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSV 349
            G +  ARR FEE+  KDV  W+ M++ Y        A+ +F +M    V PN  T  S 
Sbjct: 159 CGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASA 218

Query: 350 LQACATMEGLDLGNQIHSLVVRVGLL-SDVFVSNALMDVYAKC----------------- 391
           + AC  +  L  G +IH   ++V  L SD+ V N+L+D YAKC                 
Sbjct: 219 VSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTD 278

Query: 392 --------------------------GRMENSVELFAESPKRNHVTWNTMIVGYVQLGEV 425
                                      RM  +  +F+E   R+ V WN++I    Q G  
Sbjct: 279 LVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRS 338

Query: 426 GKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANAL 485
             A+ +  +M    V    VT  S L AC+ LAAL  G ++H   ++   D    + N+L
Sbjct: 339 VNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSL 398

Query: 486 IDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNN 545
           IDMY +CGSI  +R +FD+M   + VSWN MIS Y MHG   + + +F   +  G +PN+
Sbjct: 399 IDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNH 458

Query: 546 LTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
           +TF  +LSACS+ GL+E+G  YFK M   Y ++P +E Y  MV LL RAG  ++  + IE
Sbjct: 459 ITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIE 518

Query: 606 GIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEK 665
            +PF+P+  +W +LLGAC IH N ++   +A+++ + EP+    +VL++NIY+ A  WE 
Sbjct: 519 KMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWED 578

Query: 666 AA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGY 714
           AA           +K PG SWIE +  +H F  GDTSH  M  I   +E L    ++ GY
Sbjct: 579 AAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGY 638

Query: 715 IPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKI 774
           +PD + VL+DV EDEKE  L  HSEK+ALAF L      +P+RIIKNLR+C DCH+A K 
Sbjct: 639 VPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVCGDCHSATKF 698

Query: 775 ISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           ISK+ +R+II+RD +RFHHF DG CSCGD+W
Sbjct: 699 ISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 729



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 138/528 (26%), Positives = 242/528 (45%), Gaps = 64/528 (12%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           YA+ LQ C +  +L+    +H Q++  G  +  F  + LL VY +   + DA ++FD+M 
Sbjct: 13  YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 72

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
           ERN  S+   ++ Y     + E + LF  +  EG   + F F    K    +    +   
Sbjct: 73  ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 132

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-FNDC--------------- 222
           V+  +  +G + N+ V  +++D F  CG ++ AR+ F+ + F D                
Sbjct: 133 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 192

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT-CYEMDLYVAV 281
           F++ALN F +M   G KPN+ T A  + AC  L  +R  +  HG  +K    + DL V  
Sbjct: 193 FKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGN 252

Query: 282 ALLDLYTKSGEISNARR------------------------------------------- 298
           +L+D Y K   +  ARR                                           
Sbjct: 253 SLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACS 312

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           +F E+  +DV+ W+ +I+  AQ+  S++A++L   M  + V  N  T VS L AC+ +  
Sbjct: 313 VFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAA 372

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           L  G +IH  ++R GL +  F+ N+L+D+Y +CG ++ S  +F   P+R+ V+WN MI  
Sbjct: 373 LRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISV 432

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           Y   G    A+ +F +     +    +T++++L AC+    +E G +   + +K  Y MD
Sbjct: 433 YGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKM-MKTEYAMD 491

Query: 479 VVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
             V     ++D+ ++ G   +    +  M  + N   W +++    +H
Sbjct: 492 PAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIH 539



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/426 (26%), Positives = 204/426 (47%), Gaps = 46/426 (10%)

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
           +A +L+ C  L  +R+    H   +    ++  ++   LL++Y ++G + +ARR+F++M 
Sbjct: 13  YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 72

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
           +++V  W+ ++  Y       + ++LF  M    V P+ F F  V +AC+ ++   +G  
Sbjct: 73  ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 132

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
           ++  ++ +G   +  V  +++D++ KCGRM+ +   F E   ++   WN M+ GY   GE
Sbjct: 133 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 192

Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA-NYDMDVVVAN 483
             KA+ +F KM+ E V    +T +S + AC +L+ L  G ++H   +K    D D++V N
Sbjct: 193 FKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGN 252

Query: 484 ALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM--ISGYSMHGLSAEVLKVFDLMQ---- 537
           +L+D YAKC S+  AR  F M+   + VSWNAM  ++G++ +G     L+ F  M     
Sbjct: 253 SLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACS 312

Query: 538 ---------------------QRGWRPNNL----------------TFVGVLSACSNGGL 560
                                Q G   N L                T V  L ACS    
Sbjct: 313 VFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAA 372

Query: 561 LEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
           L QG+      +   G++ C     S++ + GR G + K+ ++ + +P Q  ++ W  ++
Sbjct: 373 LRQGKE-IHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP-QRDLVSWNVMI 430

Query: 621 GACIIH 626
               +H
Sbjct: 431 SVYGMH 436



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 5/131 (3%)

Query: 47  ITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNR 106
           +  S  E N+ +  ++L +C +   L+    IH  +++ G     F  N L+++Y +   
Sbjct: 348 MNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGS 407

Query: 107 LPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV 166
           +  + ++FD MP+R+ +S+   I  Y +    ++AV LF      G + N   FT  L  
Sbjct: 408 IQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSA 467

Query: 167 -----LVSMGW 172
                L+  GW
Sbjct: 468 CSHSGLIEEGW 478


>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
          Length = 758

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 258/664 (38%), Positives = 365/664 (54%), Gaps = 81/664 (12%)

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
           F  AL+ FSQM   G  P+N      +KAC GL  ++ A+  HG A  + ++ D +V  +
Sbjct: 95  FHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSS 154

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+ +Y K  +I +A R+F+ M + DV+ WS ++A YA+     +A  LF  M  + V PN
Sbjct: 155 LVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPN 214

Query: 343 QF-----------------------------------TFVSVLQACATMEGLDLGNQIHS 367
                                                T  SVL A   +E L +G  IH 
Sbjct: 215 LISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHG 274

Query: 368 LVVRVGLLSDVFVSNALMDVYAKC-------------------------------GRMEN 396
            V++ GL+SD  VS+AL+D+Y KC                               G++E+
Sbjct: 275 YVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVES 334

Query: 397 SVELFAESPKR----NHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLR 452
           S+ LF +   +    N V+W +MI    Q G   +A+ +F +M    V    VT   +L 
Sbjct: 335 SLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLP 394

Query: 453 ACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS 512
           AC ++AAL  G   HC +++     DV V +ALIDMYAKCG I  +R+ FD +   N V 
Sbjct: 395 ACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVC 454

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
           WNA+I+GY+MHG + E +++FDLMQ+ G +P+ ++F  VLSACS  GL E+G  YF SM 
Sbjct: 455 WNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMS 514

Query: 573 ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIG 632
           + YGIE  +EHY  MV+LL RAG L++A  +I  +P  P   +W ALL +C +HNNV +G
Sbjct: 515 SKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLG 574

Query: 633 RLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGM 681
            ++A+ + + EP +   ++LLSNIYA    W            K   K PG SWIE +  
Sbjct: 575 EVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNK 634

Query: 682 VHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKL 741
           VH   AGD SH  M  I   L+ L+M+ +K GY P+++ VL+DV E +KE+ L  HSEKL
Sbjct: 635 VHMLLAGDKSHPQMTQIIEKLDKLSMEMKKLGYFPEINFVLQDVEEQDKEQILCGHSEKL 694

Query: 742 ALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSC 801
           A+ F L   PP  P+++IKNLRIC DCH  IK IS   +REI +RD +RFHHF++G CSC
Sbjct: 695 AVVFGLLNTPPGYPLQVIKNLRICGDCHVVIKFISSFERREIFVRDTNRFHHFKEGACSC 754

Query: 802 GDFW 805
           GD+W
Sbjct: 755 GDYW 758



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 143/589 (24%), Positives = 241/589 (40%), Gaps = 124/589 (21%)

Query: 79  HCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQF 138
           H  +LK G   D      LL+ Y       DAT + D +PE N  SF T I  ++   QF
Sbjct: 36  HAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQF 95

Query: 139 VEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTAL 198
             A+  FS +   G   +     + +K    +   +    V       G DS++FV ++L
Sbjct: 96  HHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSL 155

Query: 199 IDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQM--------- 233
           +  +  C  +  A +VFD +F                  C +EA   FS+M         
Sbjct: 156 VHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNL 215

Query: 234 -----------------RAV---------GFKPNNFTFAFVLKACLGLDTIRVAKSAHGC 267
                             AV         GF+P+  T + VL A   L+ + +    HG 
Sbjct: 216 ISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGY 275

Query: 268 ALKTCYEMDLYVAVALLDLY-------------------------------TKSGEISNA 296
            +K     D  V+ AL+D+Y                               +++G++ ++
Sbjct: 276 VIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESS 335

Query: 297 RRIFEEMPKK----DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
            R+F ++  +    +V+ W+ MIA  +Q    I+A+ELF  M+ A V PN  T   +L A
Sbjct: 336 LRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPA 395

Query: 353 CATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTW 412
           C  +  L  G   H   +R G+ +DV+V +AL+D+YAKCGR++ S   F   P +N V W
Sbjct: 396 CGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCW 455

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
           N +I GY   G+  +AM +F  M         ++++ VL AC+     E G   +  ++ 
Sbjct: 456 NAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEG-SYYFNSMS 514

Query: 473 ANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISG---------- 519
           + Y ++  V +   ++ + ++ G +  A  ++  M  + +   W A++S           
Sbjct: 515 SKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLG 574

Query: 520 ------------------------YSMHGLSAEVLKVFDLMQQRGWRPN 544
                                   Y+  G+  EV +V D+M+ +G R N
Sbjct: 575 EVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKN 623



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 110/451 (24%), Positives = 191/451 (42%), Gaps = 74/451 (16%)

Query: 252 CLGLDTIRVAKS--AHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
           CL   T  ++++  AH   LKT    D ++A  LL  Y  +   ++A  + + +P+ +V 
Sbjct: 21  CLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVF 80

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
            +S +I  +++      A+  F +M    + P+     S ++ACA +  L    Q+H + 
Sbjct: 81  SFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIA 140

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELF-----------------------AESPK 406
              G  SD FV ++L+ +Y KC ++ ++  +F                        +  K
Sbjct: 141 SVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAK 200

Query: 407 R------------NHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
           R            N ++WN MI G+   G   +A++MF  M          T SSVL A 
Sbjct: 201 RLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAV 260

Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN-------- 506
             L  L  G+ +H   +K     D  V++ALIDMY KC   ++   VFD M+        
Sbjct: 261 GDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCN 320

Query: 507 ---------------------------DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
                                      + N VSW +MI+  S +G   E L++F  MQ  
Sbjct: 321 AFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIA 380

Query: 540 GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDK 599
           G +PN++T   +L AC N   L  G+A         GI   +   ++++ +  + G +  
Sbjct: 381 GVKPNSVTIPCLLPACGNIAALMHGKAA-HCFSLRRGISTDVYVGSALIDMYAKCGRIQA 439

Query: 600 AAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
           +    +GIP + +++ W A++    +H   +
Sbjct: 440 SRICFDGIPTK-NLVCWNAVIAGYAMHGKAK 469



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 111/465 (23%), Positives = 201/465 (43%), Gaps = 71/465 (15%)

Query: 50  SVSEFNSHSYATS--LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRL 107
           SVS F+S S+  S  +   I+ + ++ A  +  ++ +     D+ + + L+  Y +   +
Sbjct: 141 SVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEP----DVVSWSALVAAYARQGCV 196

Query: 108 PDATKLFDEMPER----NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAF 163
            +A +LF EM +     N IS+   I G+  S  + EAV +F  +H  G E +    ++ 
Sbjct: 197 DEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSV 256

Query: 164 LKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----- 218
           L  +  +    +   +   V K G  S+  V +ALID +  C C     +VFD +     
Sbjct: 257 LPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDV 316

Query: 219 -----------FNDCFEEALNFFSQ----------------------------------- 232
                       N   E +L  F Q                                   
Sbjct: 317 GSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFRE 376

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           M+  G KPN+ T   +L AC  +  +   K+AH  +L+     D+YV  AL+D+Y K G 
Sbjct: 377 MQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGR 436

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           I  +R  F+ +P K+++ W+ +IA YA    + +A+E+F  M+++   P+  +F  VL A
Sbjct: 437 IQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSA 496

Query: 353 CATMEGLDLGN-QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHV 410
           C+     + G+   +S+  + G+ + V     ++ + ++ G++E +  +    P   +  
Sbjct: 497 CSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDAC 556

Query: 411 TWNTMIVG-----YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
            W  ++        V LGEV  A  +F   LE   P   +  S++
Sbjct: 557 VWGALLSSCRVHNNVSLGEVA-AEKLFE--LEPSNPGNYILLSNI 598


>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
 gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
          Length = 705

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 243/614 (39%), Positives = 365/614 (59%), Gaps = 35/614 (5%)

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           ALN ++ MR +  + ++F    VLKAC  +   R+ K  HG ++K     D++V  AL+ 
Sbjct: 93  ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152

Query: 286 LYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQ-----------------------TD 322
           +Y++ G + +AR +F++M ++DV+ WS MI  Y                          D
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCND 212

Query: 323 LSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSN 382
           L  +   LF RM +  V PN  T +S++ +C  +  + LG ++H+ ++R G    + ++ 
Sbjct: 213 LE-EGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALAT 271

Query: 383 ALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPA 442
           AL+D+Y KCG + ++  +F     ++ +TW  MI  Y Q   +  A  +F +M +  V  
Sbjct: 272 ALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRP 331

Query: 443 TEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVF 502
            E+T  S+L  CA   AL+ G   H    K   ++DV++  ALIDMYAKCG I+ A+ +F
Sbjct: 332 NELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLF 391

Query: 503 DMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLE 562
               D +  +WN M++GY MHG   + LK+F  M+  G +PN++TF+G L ACS+ GL+ 
Sbjct: 392 SEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVV 451

Query: 563 QGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           +G+  F+ M+ ++G+ P +EHY  MV LLGRAG LD+A K+IE +P  P++ IW A+L A
Sbjct: 452 EGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAA 511

Query: 623 CIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEP 671
           C IH N  +G L+A+ +L  EP++    VL+SNIYA A  W   A            KEP
Sbjct: 512 CKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEP 571

Query: 672 GLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKE 731
           G+S IE  G+VH F+ GDT+H  +  I  ML  ++ K ++AGY+PD S VL ++ E+EKE
Sbjct: 572 GMSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLPDTSVVLHNIDEEEKE 631

Query: 732 RYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRF 791
             L  HSEKLA+AF L    P +PIR++KNLRIC DCHT  K++SKI +R II+RD +RF
Sbjct: 632 TALNYHSEKLAMAFGLISTAPGTPIRVVKNLRICDDCHTVTKLLSKIYKRVIIVRDRNRF 691

Query: 792 HHFQDGCCSCGDFW 805
           HHF++G CSCG +W
Sbjct: 692 HHFREGSCSCGGYW 705



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 121/427 (28%), Positives = 199/427 (46%), Gaps = 48/427 (11%)

Query: 141 AVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALID 200
           A+  ++ + +   E++ F   + LK    +  A +   +     K G  S+ FV  AL+ 
Sbjct: 93  ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152

Query: 201 AFSVCGCVEFARKVFDGLF---------------------------------------ND 221
            +S CG +  AR +FD +                                        ND
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCND 212

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
             EE    F +M      PN+ T   ++ +C  +  +++ K  H   L+  + M L +A 
Sbjct: 213 -LEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALAT 271

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           AL+D+Y K GEI +AR IF+ M  KDV+ W+ MI+ YAQ +    A +LF +MR   V P
Sbjct: 272 ALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRP 331

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           N+ T VS+L  CA    LD+G   H+ + + G+  DV +  AL+D+YAKCG +  +  LF
Sbjct: 332 NELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLF 391

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
           +E+  R+  TWN M+ GY   G   KA+ +F++M    V   ++T+   L AC+    + 
Sbjct: 392 SEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVV 451

Query: 462 PGMQVHCLTVKANYDMDVVVA----NALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAM 516
            G     L  K  +D  +V        ++D+  + G + +A +++  M    N   W AM
Sbjct: 452 EG---KGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAM 508

Query: 517 ISGYSMH 523
           ++   +H
Sbjct: 509 LAACKIH 515



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/407 (25%), Positives = 172/407 (42%), Gaps = 46/407 (11%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E +S    + L++C Q    +    IH   +K G   D+F  N L+ +Y +   L  A  
Sbjct: 106 EVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARL 165

Query: 113 LFDEMPERNTISFVTTIQ----------------------GYTVSSQFVEAVGLFSTLHR 150
           LFD+M ER+ +S+ T I+                      GY   +   E   LF  +  
Sbjct: 166 LFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIE 225

Query: 151 EGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEF 210
           E    N     + +     +G  +L   + A + + G   +  + TAL+D +  CG +  
Sbjct: 226 ENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRS 285

Query: 211 ARKVFDGLFN----------------DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLG 254
           AR +FD + N                +C + A   F QMR  G +PN  T   +L  C  
Sbjct: 286 ARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAV 345

Query: 255 LDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFM 314
              + + K  H    K   E+D+ +  AL+D+Y K G+IS A+R+F E   +D+  W+ M
Sbjct: 346 NGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVM 405

Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA----TMEGLDLGNQIHSLVV 370
           +A Y        A++LF  M    V PN  TF+  L AC+     +EG  L      ++ 
Sbjct: 406 MAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGL---FEKMIH 462

Query: 371 RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMI 416
             GL+  V     ++D+  + G ++ + ++    P   N   W  M+
Sbjct: 463 DFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAML 509


>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
 gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
          Length = 1122

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 257/770 (33%), Positives = 422/770 (54%), Gaps = 36/770 (4%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L+S + +  L  A  +  Q+  K    ++F+ N++L+ Y     LP A  LF   P RN 
Sbjct: 50  LRSLLSSGHLHRARAMFDQMPHK----NIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNA 105

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
            ++   ++ +  + +  +A+ LF  +  EG   +    T  L +          P +   
Sbjct: 106 TTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCT-----VPSLHPF 160

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF-----------DGLFNDCFEE-----A 226
             K G D++ FV   L+DA+   G +  AR+VF           + +   C +E     A
Sbjct: 161 AIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQA 220

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           L  F+ MR  G    +FTF+ +L    G+  + +    H   L++   ++++V  +LLD 
Sbjct: 221 LQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDF 280

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y+K   + + RR+F+EMP++D + ++ +IA YA    +   + LF  M++         +
Sbjct: 281 YSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPY 340

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
            ++L    ++  + +G QIH+ +V +GL S+  + NAL+D+Y+KCG ++ +   F+   +
Sbjct: 341 ATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSE 400

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
           ++ ++W  +I GYVQ G+  +A+ +FS M    +     T+SS+++A +SLA +  G Q+
Sbjct: 401 KSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQL 460

Query: 467 HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLS 526
           H   +++ Y   V   + L+DMYAKCG + +A   FD M + N +SWNA+IS Y+ +G +
Sbjct: 461 HSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEA 520

Query: 527 AEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTS 586
              +K+F+ M   G+ P+++TF+ VL+ACS+ GL ++   YF  M   Y I P  EHY  
Sbjct: 521 KNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYAC 580

Query: 587 MVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPED 646
           ++  LGR G   +  K++  +PF+   +IW ++L +C IH N E+ R++A  +   EP D
Sbjct: 581 VIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTD 640

Query: 647 EATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADM 695
              +V+LSNIYA A  WE AA            KE G SW+E +  ++ F + D +   +
Sbjct: 641 ATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMI 700

Query: 696 NIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSP 755
           + I+  L+ L  +  K GY PD++  L  V  + K   L  HSE+LA+AFAL   P  +P
Sbjct: 701 DEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTP 760

Query: 756 IRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           IRI+KNL  C+DCH  IK+ISKIV R+II+RD  RFHHF+DG CSCGD+W
Sbjct: 761 IRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 810


>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
 gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
          Length = 635

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 229/577 (39%), Positives = 357/577 (61%), Gaps = 12/577 (2%)

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           P    +  ++ AC     +  A++ H    ++    D ++  +L+ +Y K G +S+AR +
Sbjct: 60  PTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHV 119

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL 359
           F+ +P +DV+ W+++I  YAQ D+  +A+ L   M +A   P+ FTF S L+A     G 
Sbjct: 120 FDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGR 179

Query: 360 DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGY 419
            +G Q+H+L V+  L  DV+V +AL+D+YA+C +M+ ++ +F     +N V+WN +I G+
Sbjct: 180 GIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGF 239

Query: 420 VQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDV 479
            + G+    ++ F++M      AT  TYSSV  A A + ALE G  VH   +K+   +  
Sbjct: 240 ARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTA 299

Query: 480 VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
            VAN ++ MYAK GS+ DAR VFD ++  + V+WN M++ ++ +GL  E +  F+ +++ 
Sbjct: 300 FVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKY 359

Query: 540 GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDK 599
           G + N +TF+ VL+ACS+GGL+++G+ YF  M+ +Y +EP I+HY S V LLGRAG L +
Sbjct: 360 GIQLNQITFLSVLTACSHGGLVKEGKQYF-DMMKDYNVEPEIDHYVSFVDLLGRAGLLKE 418

Query: 600 AAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAM 659
           A   +  +P +P+  +W ALLGAC +H N +IG+ +A H+ + +PED    VLL NIYA 
Sbjct: 419 ALIFVFKMPMEPTAAVWGALLGACRMHKNAKIGQYAADHVFELDPEDTGPPVLLYNIYAS 478

Query: 660 ARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMK 708
              W+ AA            KEP  SW+E +  VH F A D++H     I  M E +N +
Sbjct: 479 TGQWDDAARVRKMMKATGVKKEPACSWVEIENSVHMFVADDSTHPKSEEIYRMWEEVNTR 538

Query: 709 SRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDC 768
            +KAGY+P+   VL  ++E E+E  L  HSEK+ALAFAL  MP  + IRI+KN+RIC DC
Sbjct: 539 IKKAGYVPNTDYVLLHIKEQERETKLQYHSEKIALAFALINMPAGATIRIMKNIRICGDC 598

Query: 769 HTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           H+A + +S++ +REI++RD +RFHHF +G CSCGD+W
Sbjct: 599 HSAFRYVSEVFKREIVVRDTNRFHHFSNGSCSCGDYW 635



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 170/351 (48%), Gaps = 17/351 (4%)

Query: 190 SNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQM 233
            + F+  +LI  +  CG V  AR VFDG+                 ND   EAL     M
Sbjct: 95  GDGFLLNSLIHMYCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDM 154

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
               F+P+ FTF   LKA        + +  H  A+K   + D+YV  ALLD+Y +  ++
Sbjct: 155 LRARFRPSGFTFTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQM 214

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
             A R+F+ +  K+ + W+ +IA +A+       +  F  M++       FT+ SV  A 
Sbjct: 215 DMAIRVFDWLDSKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSAL 274

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
           A +  L+ G  +H+ +++ G     FV+N ++ +YAK G M ++ ++F    +R+ VTWN
Sbjct: 275 ARIGALEQGRWVHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWN 334

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
           TM+  + Q G   +A+  F ++ +  +   ++T+ SVL AC+    ++ G Q   +    
Sbjct: 335 TMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKDY 394

Query: 474 NYDMDVVVANALIDMYAKCGSITDARL-VFDMMNDWNEVSWNAMISGYSMH 523
           N + ++    + +D+  + G + +A + VF M  +     W A++    MH
Sbjct: 395 NVEPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMH 445



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 180/363 (49%), Gaps = 16/363 (4%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           Y + + +C Q+ +L  A  IH  + +     D F  N L+++Y K   + DA  +FD +P
Sbjct: 65  YHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIP 124

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
            R+ +S+   I GY  +    EA+GL   + R     + F FT+FLK   + G   +   
Sbjct: 125 TRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQ 184

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF-------- 223
           + A   K   D + +VG+AL+D ++ C  ++ A +VFD L       +N           
Sbjct: 185 MHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGD 244

Query: 224 -EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
            E  L  F++M+  GF   +FT++ V  A   +  +   +  H   +K+  ++  +VA  
Sbjct: 245 GETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANT 304

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           +L +Y KSG + +AR++F+ + ++D++ W+ M+  +AQ  L  +AV  F  +R+  +  N
Sbjct: 305 ILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLN 364

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           Q TF+SVL AC+    +  G Q   ++    +  ++    + +D+  + G ++ ++    
Sbjct: 365 QITFLSVLTACSHGGLVKEGKQYFDMMKDYNVEPEIDHYVSFVDLLGRAGLLKEALIFVF 424

Query: 403 ESP 405
           + P
Sbjct: 425 KMP 427



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 149/284 (52%), Gaps = 2/284 (0%)

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           +AP    + S++ ACA  + L     IHS + R  L  D F+ N+L+ +Y KCG + ++ 
Sbjct: 58  LAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDAR 117

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            +F   P R+ V+W  +I GY Q     +A+ +   ML  +   +  T++S L+A  +  
Sbjct: 118 HVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACG 177

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
               G Q+H L VK N D DV V +AL+DMYA+C  +  A  VFD ++  NEVSWNA+I+
Sbjct: 178 GRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIA 237

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           G++  G     L  F  MQ+ G+   + T+  V SA +  G LEQG      M+ + G +
Sbjct: 238 GFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKS-GQK 296

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
                  +++ +  ++G +  A K+ + +  Q  ++ W  +L A
Sbjct: 297 LTAFVANTILGMYAKSGSMVDARKVFDRVD-QRDLVTWNTMLTA 339



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 94/191 (49%), Gaps = 8/191 (4%)

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGS 494
           +L  ++  T   Y S++ ACA    L     +H    ++    D  + N+LI MY KCG+
Sbjct: 53  LLTGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGA 112

Query: 495 ITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL-- 552
           ++DAR VFD +   + VSW  +I+GY+ + + AE L +   M +  +RP+  TF   L  
Sbjct: 113 VSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKA 172

Query: 553 -SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQP 611
             AC   G+ EQ  A    +   Y ++  +   ++++ +  R   +D A ++ + +  + 
Sbjct: 173 AGACGGRGIGEQMHA----LAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKN 228

Query: 612 SVMIWRALLGA 622
            V  W AL+  
Sbjct: 229 EVS-WNALIAG 238



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 63/308 (20%), Positives = 125/308 (40%), Gaps = 32/308 (10%)

Query: 12  CKQLTHQSKINAWLRG---LSAQAALST-QQCSNSTTTPITFSVSEFNSH-----SYATS 62
           C+Q+    ++  WL     +S  A ++   +  +  TT + F+  + N       +Y++ 
Sbjct: 211 CQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSV 270

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
             +  +   L+    +H  ++K G  L  F  N +L +Y K   + DA K+FD + +R+ 
Sbjct: 271 FSALARIGALEQGRWVHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDL 330

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +++ T +  +       EAV  F  + + G +LN   F + L      G  +     F  
Sbjct: 331 VTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFDM 390

Query: 183 V--YKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKP 240
           +  Y +  + + +V  + +D     G +               +EAL F  +M     +P
Sbjct: 391 MKDYNVEPEIDHYV--SFVDLLGRAGLL---------------KEALIFVFKMP---MEP 430

Query: 241 NNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIF 300
               +  +L AC      ++ + A     +   E D    V L ++Y  +G+  +A R+ 
Sbjct: 431 TAAVWGALLGACRMHKNAKIGQYAADHVFELDPE-DTGPPVLLYNIYASTGQWDDAARVR 489

Query: 301 EEMPKKDV 308
           + M    V
Sbjct: 490 KMMKATGV 497


>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
          Length = 810

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 257/770 (33%), Positives = 422/770 (54%), Gaps = 36/770 (4%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L+S + +  L  A  +  Q+  K    ++F+ N++L+ Y     LP A  LF   P RN 
Sbjct: 50  LRSLLSSGHLHRARAMFDQMPHK----NIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNA 105

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
            ++   ++ +  + +  +A+ LF  +  EG   +    T  L +          P +   
Sbjct: 106 TTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLP-----GCTVPSLHPF 160

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF-----------DGLFNDCFEE-----A 226
             K G D++ FV   L+DA+   G +  AR+VF           + +   C +E     A
Sbjct: 161 AIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQA 220

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           L  F+ MR  G    +FTF+ +L    G+  + +    H   L++   ++++V  +LLD 
Sbjct: 221 LQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDF 280

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y+K   + + RR+F+EMP++D + ++ +IA YA    +   + LF  M++         +
Sbjct: 281 YSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPY 340

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
            ++L    ++  + +G QIH+ +V +GL S+  + NAL+D+Y+KCG ++ +   F+   +
Sbjct: 341 ATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSE 400

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
           ++ ++W  +I GYVQ G+  +A+ +FS M    +     T+SS+++A +SLA +  G Q+
Sbjct: 401 KSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQL 460

Query: 467 HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLS 526
           H   +++ Y   V   + L+DMYAKCG + +A   FD M + N +SWNA+IS Y+ +G +
Sbjct: 461 HSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEA 520

Query: 527 AEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTS 586
              +K+F+ M   G+ P+++TF+ VL+ACS+ GL ++   YF  M   Y I P  EHY  
Sbjct: 521 KNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYAC 580

Query: 587 MVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPED 646
           ++  LGR G   +  K++  +PF+   +IW ++L +C IH N E+ R++A  +   EP D
Sbjct: 581 VIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTD 640

Query: 647 EATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADM 695
              +V+LSNIYA A  WE AA            KE G SW+E +  ++ F + D +   +
Sbjct: 641 ATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMI 700

Query: 696 NIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSP 755
           + I+  L+ L  +  K GY PD++  L  V  + K   L  HSE+LA+AFAL   P  +P
Sbjct: 701 DEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTP 760

Query: 756 IRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           IRI+KNL  C+DCH  IK+ISKIV R+II+RD  RFHHF+DG CSCGD+W
Sbjct: 761 IRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 810


>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
            sativa Japonica Group]
 gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
          Length = 1062

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 291/789 (36%), Positives = 436/789 (55%), Gaps = 43/789 (5%)

Query: 54   FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
            F S   AT L SC     L     +  +VLK G   DL+  + L++ + +   L +A  +
Sbjct: 280  FGSLITATYLSSC----SLGLLDQLFVRVLKSGCSSDLYVGSALVSAFARHGMLDEAKDI 335

Query: 114  FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
            +  + ERN ++    I G  V  Q  EA        R+   +N   +   L  +     A
Sbjct: 336  YLGLKERNAVTLNGLIAGL-VKQQHGEAAAEIFMGARDSAAVNVDTYVVLLSAIAEFSTA 394

Query: 174  ELC----PCVFACVYKLGHDSNAF-VGTALIDAFSVCGCVEFARKVFDGLF--------- 219
            E        V A V + GH      V   L++ ++ CG ++ A +VF  +          
Sbjct: 395  EQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNT 454

Query: 220  -------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC 272
                   N   E A+  +  MR     P+NF     L +C GL  +   +  H  A+K  
Sbjct: 455  IITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWG 514

Query: 273  YEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSI-DAVELF 331
              +D  V+ AL+ +Y + G +S    IF  M   DV+ W+ ++   A +   I ++V++F
Sbjct: 515  LYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQVF 574

Query: 332  CRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC 391
              M ++ + PN+ TFV+ L A   +  L+LG QIHS++++ G+  D  V NALM  YAK 
Sbjct: 575  SNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKS 634

Query: 392  GRMENSVELFAE-SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
            G +++   LF+  S +R+ ++WN+MI GY+  G + +AM     M+  +      T+S V
Sbjct: 635  GDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIV 694

Query: 451  LRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE 510
            L ACAS+AALE GM++H   ++++ + DVVV +AL+DMY+KCG I  A  VF  M+  NE
Sbjct: 695  LNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNE 754

Query: 511  VSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKS 570
             SWN+MISGY+ HGL  + L++F+ MQ+ G  P+++TFV VLSACS+ GL+E+G  YF+ 
Sbjct: 755  FSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERGLDYFE- 813

Query: 571  MVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN-- 628
            ++ +YGI P IEHY+ ++ LLGRAG LDK  + ++ +P +P+ +IWR +L AC    +  
Sbjct: 814  LMEDYGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVLVACQQSKHRA 873

Query: 629  -VEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWI 676
             +++G  +++ +L+ EP++   +VL S  +A    WE  A            KE G SW+
Sbjct: 874  KIDLGTEASRMLLELEPQNPVNYVLSSKFHAAIGRWEDTAKARAAMKGAAVKKEAGRSWV 933

Query: 677  ENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWV 736
                 VH F AGD SH +   I   L +L  K R AGY+P    VL D+ E+ KE  L  
Sbjct: 934  TLTDGVHTFIAGDRSHPNTKEIYEKLNFLIQKIRNAGYVPLTEYVLHDLEEENKEELLRY 993

Query: 737  HSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQD 796
            HSEKLA+AF L +     PIRI+KNLR+C DCHTA + IS+IV R+II+RD  RFHHF+D
Sbjct: 994  HSEKLAVAFVLTRSSSGGPIRIMKNLRVCGDCHTAFRYISQIVGRQIILRDSIRFHHFKD 1053

Query: 797  GCCSCGDFW 805
            G CSCGD+W
Sbjct: 1054 GKCSCGDYW 1062



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 172/595 (28%), Positives = 287/595 (48%), Gaps = 51/595 (8%)

Query: 77  TIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSS 136
           ++H +V+K+G   DLF  N L+N Y K  RL  A ++FD MP RN +S+   I G+ +S 
Sbjct: 86  SLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSG 145

Query: 137 QFVEAVGLFSTLHREGHELNP--FAFTAFLKVLVSMGWAEL--CPCVFACVYKLGHDSNA 192
              +A  LF  + REG    P  F F + L+     G   L     V   V K    SN 
Sbjct: 146 LPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNT 205

Query: 193 FVGTALIDAFSVC--GCVEFARKVFDG-------LFNDCFE------EALNFFSQMRAVG 237
            V  ALI  +  C  G    A++VFD         +N          +A+  F+  RA+ 
Sbjct: 206 TVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQ 265

Query: 238 F-------KPNNFTF-----AFVLKAC-LGLDT---IRVAKSAHGCALKTCYEMDLYVAV 281
           +       +P   TF     A  L +C LGL     +RV KS  GC+       DLYV  
Sbjct: 266 YDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKS--GCS------SDLYVGS 317

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           AL+  + + G +  A+ I+  + +++ +  + +IA   +      A E+F   R +  A 
Sbjct: 318 ALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDS-AAV 376

Query: 342 NQFTFVSVLQACATM----EGLDLGNQIHSLVVRVG-LLSDVFVSNALMDVYAKCGRMEN 396
           N  T+V +L A A      +GL  G ++H+ V+R G +   + VSN L+++YAKCG ++ 
Sbjct: 377 NVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDK 436

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           +  +F     R+ ++WNT+I    Q G    AM+ +  M +  +  +     S L +CA 
Sbjct: 437 ACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAG 496

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           L  L  G Q+HC  VK    +D  V+NAL+ MY +CG +++   +F+ M+  + VSWN++
Sbjct: 497 LGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSI 556

Query: 517 ISGY-SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           +    S      E ++VF  M + G  PN +TFV  L+A +   +LE G+    S++  +
Sbjct: 557 MGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQ-IHSVMLKH 615

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
           G+        +++S   ++G +D   +L   +  +   + W +++   I + +++
Sbjct: 616 GVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQ 670



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 179/364 (49%), Gaps = 26/364 (7%)

Query: 262 KSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQT 321
           +S H   +K     DL++A  L++ Y K   +  ARR+F+ MP ++ + W+ +I+ +  +
Sbjct: 85  ESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLS 144

Query: 322 DLSIDAVELFCRMRQAFVA--PNQFTFVSVLQAC--ATMEGLDLGNQIHSLVVRVGLLSD 377
            L  DA  LF  M +      P  FTF SVL+AC  +  + L    Q+H LV +    S+
Sbjct: 145 GLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSN 204

Query: 378 VFVSNALMDVYAKC--GRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKM 435
             V NAL+ +Y  C  G    +  +F  +P R+ +TWN ++  Y + G+      +F  M
Sbjct: 205 TTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAM 264

Query: 436 LEE----QVPATEVTYSSVLRACASLAALEPGM--QVHCLTVKANYDMDVVVANALIDMY 489
             +    ++  TE T+ S++ A   L++   G+  Q+    +K+    D+ V +AL+  +
Sbjct: 265 QYDDSGIELRPTEHTFGSLITA-TYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAF 323

Query: 490 AKCGSITDARLVFDMMNDWNEVSWNAMISGY--SMHGLSAEVLKVFDLMQQRGWRPNNL- 546
           A+ G + +A+ ++  + + N V+ N +I+G     HG +A  +     M  R     N+ 
Sbjct: 324 ARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEI----FMGARDSAAVNVD 379

Query: 547 TFVGVLSACSNGGLLEQG-----EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAA 601
           T+V +LSA +     EQG     E +   + A + I   I     +V++  + G +DKA 
Sbjct: 380 TYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGH-IYRKIAVSNGLVNMYAKCGAIDKAC 438

Query: 602 KLIE 605
           ++ +
Sbjct: 439 RVFQ 442


>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 771

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 245/593 (41%), Positives = 350/593 (59%), Gaps = 16/593 (2%)

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           +AL FF++MR  G  PN+FTF+ +L AC     +   +  H    K C+  D +VA ALL
Sbjct: 183 QALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALL 242

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF-VAPNQ 343
           D+Y K G +  A  +F+EMP ++++ W+ MI  + +  L   A+ +F   R+   + P+Q
Sbjct: 243 DMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVF---REVLSLGPDQ 299

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
            +  SVL ACA +  LD G Q+H  +V+ GL+  V+V N+L+D+Y KCG  E++ +LF  
Sbjct: 300 VSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCG 359

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
              R+ VTWN MI+G  +     +A   F  M+ E V   E +YSS+  A AS+AAL  G
Sbjct: 360 GGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQG 419

Query: 464 MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMH 523
             +H   +K  +  +  ++++L+ MY KCGS+ DA  VF    + N V W AMI+ +  H
Sbjct: 420 TMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQH 479

Query: 524 GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEH 583
           G + E +K+F+ M   G  P  +TFV VLSACS+ G ++ G  YF SM   + I+P +EH
Sbjct: 480 GCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEH 539

Query: 584 YTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFE 643
           Y  MV LLGR G L++A + IE +PF+P  ++W ALLGAC  H NVE+GR  A+ +   E
Sbjct: 540 YACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVAERLFKLE 599

Query: 644 PEDEATHVLLSNIYAMARSWEKA-----------ASKEPGLSWIENQGMVHYFRAGDTSH 692
           P++   ++LLSNIY      E+A             KE G SWI+ +     F A D SH
Sbjct: 600 PDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKESGCSWIDVKNRTFVFNANDRSH 659

Query: 693 ADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPP 752
           +    I GML+ L    ++ GY+ +       V E  +E+ LW HSEKLALAF L  +PP
Sbjct: 660 SRTQEIYGMLQKLKELIKRRGYVAETQFATNSV-EGSEEQSLWCHSEKLALAFGLLVLPP 718

Query: 753 SSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            SP+RI KNLR C DCHT +K  S+I QREII+RD++RFH F +G CSC D+W
Sbjct: 719 GSPVRIKKNLRTCGDCHTVMKFASEIFQREIIVRDINRFHRFTNGSCSCMDYW 771



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/368 (33%), Positives = 189/368 (51%), Gaps = 6/368 (1%)

Query: 255 LDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP--KKDVIPWS 312
           L +++ A   H   + T     L     LL LY K G I +   +F   P    +V+ W+
Sbjct: 110 LKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWT 169

Query: 313 FMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV 372
            +I + ++++    A+  F RMR   + PN FTF ++L ACA    L  G QIH+L+ + 
Sbjct: 170 TLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKH 229

Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMF 432
             L+D FV+ AL+D+YAKCG M  +  +F E P RN V+WN+MIVG+V+    G+A+ +F
Sbjct: 230 CFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVF 289

Query: 433 SKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKC 492
            ++L   +   +V+ SSVL ACA L  L+ G QVH   VK      V V N+L+DMY KC
Sbjct: 290 REVL--SLGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKC 347

Query: 493 GSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL 552
           G   DA  +F    D + V+WN MI G        +    F  M + G  P+  ++  + 
Sbjct: 348 GLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLF 407

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
            A ++   L QG     S V   G        +S+V++ G+ G +  A ++      + +
Sbjct: 408 HASASIAALTQG-TMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETK-EHN 465

Query: 613 VMIWRALL 620
           V+ W A++
Sbjct: 466 VVCWTAMI 473



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 128/497 (25%), Positives = 230/497 (46%), Gaps = 26/497 (5%)

Query: 51  VSEFNSHSYATSLQSCIQN----DDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNR 106
           V +F+  S    L+  + N      L+ A  IH Q++   N   L   N LL +Y K   
Sbjct: 88  VPKFHQFSSVPDLKHLLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGS 147

Query: 107 LPDATKLFDEMPE--RNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFL 164
           +     LF+  P    N +++ T I   + S++  +A+  F+ +   G   N F F+A L
Sbjct: 148 IHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAIL 207

Query: 165 KVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL------ 218
                         + A ++K    ++ FV TAL+D ++ CG +  A  VFD +      
Sbjct: 208 PACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLV 267

Query: 219 ----------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCA 268
                      N  +  A+  F ++ ++G  P+  + + VL AC GL  +   K  HG  
Sbjct: 268 SWNSMIVGFVKNKLYGRAIGVFREVLSLG--PDQVSISSVLSACAGLVELDFGKQVHGSI 325

Query: 269 LKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAV 328
           +K      +YV  +L+D+Y K G   +A ++F     +DV+ W+ MI    +      A 
Sbjct: 326 VKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQAC 385

Query: 329 ELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVY 388
             F  M +  V P++ ++ S+  A A++  L  G  IHS V++ G + +  +S++L+ +Y
Sbjct: 386 TYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMY 445

Query: 389 AKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYS 448
            KCG M ++ ++F E+ + N V W  MI  + Q G   +A+ +F +ML E V    +T+ 
Sbjct: 446 GKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFV 505

Query: 449 SVLRACASLAALEPGMQ-VHCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMN 506
           SVL AC+    ++ G +  + +    N    +     ++D+  + G + +A R +  M  
Sbjct: 506 SVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPF 565

Query: 507 DWNEVSWNAMISGYSMH 523
           + + + W A++     H
Sbjct: 566 EPDSLVWGALLGACGKH 582



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 151/309 (48%), Gaps = 10/309 (3%)

Query: 328 VELFCRMRQAFVAPNQFTFVS----VLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNA 383
           ++LF   +      +QF+ V     +L   A ++ L    QIHS +V     + +   N 
Sbjct: 78  LQLFTSYQSGVPKFHQFSSVPDLKHLLNNAAKLKSLKHATQIHSQLVTTNNHASLANINT 137

Query: 384 LMDVYAKCGRMENSVELFA--ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVP 441
           L+ +YAKCG + +++ LF     P  N VTW T+I    +  +  +A+  F++M    + 
Sbjct: 138 LLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIY 197

Query: 442 ATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLV 501
               T+S++L ACA  A L  G Q+H L  K  +  D  VA AL+DMYAKCGS+  A  V
Sbjct: 198 PNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENV 257

Query: 502 FDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLL 561
           FD M   N VSWN+MI G+  + L    + VF  +   G  P+ ++   VLSAC+    L
Sbjct: 258 FDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLG--PDQVSISSVLSACAGLVEL 315

Query: 562 EQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLG 621
           + G+    S+V   G+   +    S+V +  + G  + A KL  G      V+ W  ++ 
Sbjct: 316 DFGKQVHGSIVKR-GLVGLVYVKNSLVDMYCKCGLFEDATKLFCG-GGDRDVVTWNVMIM 373

Query: 622 ACIIHNNVE 630
            C    N E
Sbjct: 374 GCFRCRNFE 382


>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 266/781 (34%), Positives = 418/781 (53%), Gaps = 28/781 (3%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           + +  +  + LQ C  +  L+    +   +   G  LD    + L  +Y     L +A++
Sbjct: 91  DIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASR 150

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +FD++     + +   +     S  F  ++GLF  +   G E++ + F+   K   S+  
Sbjct: 151 VFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRS 210

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------------- 219
                 +   + K G      VG +L+  +     V+ ARKVFD +              
Sbjct: 211 VNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIING 270

Query: 220 ---NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
              N   E+ L+ F QM   G + +  T   V   C     I + ++ H   +K C+  +
Sbjct: 271 YVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSRE 330

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
                 LLD+Y+K G++ +A+ +F EM  + V+ ++ MIA YA+  L+ +AV+LF  M +
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             ++P+ +T  +VL  CA    LD G ++H  +    +  D+FVSNALMD+YAKCG M  
Sbjct: 391 EGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMRE 450

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML-EEQVPATEVTYSSVLRACA 455
           +  +F+E   ++ ++WNT+I GY +     +A+ +F+ +L E++    E T + VL ACA
Sbjct: 451 AELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACA 510

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
           SL+A + G ++H   ++  Y  D  VAN+L+DMYAKCG++  ARL+FD +   + VSW  
Sbjct: 511 SLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTV 570

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           MI+GY MHG   E + +F+ M+Q G  P+ ++FV +L ACS+ GL+++G  +F  M    
Sbjct: 571 MIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHEC 630

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS 635
            IEP +EHY  +V +L R G+L KA + IE +P  P   IW ALL  C IH++V++    
Sbjct: 631 KIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERV 690

Query: 636 AQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHY 684
           A+ + + EPE+   +VL++NIYA A  WE           +   K PG SWIE +G V+ 
Sbjct: 691 AEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNI 750

Query: 685 FRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALA 744
           F AGD+S+ +   I   L  +  +  + GY P     L D  E EKE  L  HSEKLA+A
Sbjct: 751 FVAGDSSNPETEKIEAFLRGVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMA 810

Query: 745 FALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
             +        IR+ KNLR+C DCH   K +SK+ +REI++RD +RFH F+DG CSC  F
Sbjct: 811 LGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGF 870

Query: 805 W 805
           W
Sbjct: 871 W 871


>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 736

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 246/645 (38%), Positives = 375/645 (58%), Gaps = 28/645 (4%)

Query: 189 DSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQ 232
           ++N ++ T L   ++ CG +  A  +FDG+                 N    ++L  + +
Sbjct: 92  ENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYRE 151

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           M   G + +NFT+ FVLKAC  L  + + +  H   +    E D+YV  +LL +Y K G+
Sbjct: 152 MLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGD 211

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           +  AR +F+ M ++D+  W+ MI+ YA+   S  A  +F  M +A +  +  T + +L A
Sbjct: 212 MGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSA 271

Query: 353 CATMEGLDLGNQIHSLVVRVGLLS-DVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
           CA ++ +  G  IH   VR  + + + F +N+L+++Y  C  M ++  LF     ++ V+
Sbjct: 272 CADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVS 331

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
           WN+MI+GY + G+  +++ +F +M  +     +VT+ +VL AC  +AAL  GM +H   V
Sbjct: 332 WNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLV 391

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
           K  +D + +V  AL+DMY+KCGS+  +R VFD M D + VSW+AM++GY +HG   E + 
Sbjct: 392 KKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAIS 451

Query: 532 VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLL 591
           + D M+     P+N  F  +LSACS+ GL+ +G+  F  M   Y ++P + HY+ MV LL
Sbjct: 452 ILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLL 511

Query: 592 GRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHV 651
           GRAGHLD+A  +I  +  +P+  IW ALL A  +H N+++  +SAQ + D  P+  ++++
Sbjct: 512 GRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEISAQKVFDMNPKVVSSYI 571

Query: 652 LLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRG 700
            LSNIYA  + W+           K   K PG S+IE   MVH F  GD SH     I  
Sbjct: 572 CLSNIYAAEKRWDDVERVRAMVRRKGLKKSPGCSFIELDNMVHRFLVGDKSHQQTEDIYA 631

Query: 701 MLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIK 760
            L  L  + ++AGY PD S V  DV E+ KE+ LW HSE+LA+AFAL    P + IRI K
Sbjct: 632 KLNELKQQLKEAGYKPDTSLVFYDVEEEVKEKMLWDHSERLAIAFALINTGPGTVIRITK 691

Query: 761 NLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           NLR+C DCHT  K+IS++  REII+RD+HRFHHF  G CSCGD+W
Sbjct: 692 NLRVCGDCHTVTKLISELTGREIIMRDIHRFHHFIKGFCSCGDYW 736



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 121/504 (24%), Positives = 227/504 (45%), Gaps = 38/504 (7%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNV-----YVKLNRLPDATKLFDEM 117
           LQS       +    +H  ++       +   N  LN      Y     +  A  +FD +
Sbjct: 66  LQSFTNTKSFKQGQQLHAHMIS----FSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGI 121

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
             +N+  +   I+GY  +   ++++ L+  +   G   + F +   LK    +   E+  
Sbjct: 122 VLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGR 181

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------ND 221
            V + V   G +S+ +VG +L+  ++  G +  AR VFD +                 N 
Sbjct: 182 RVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNA 241

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY-EMDLYVA 280
               A   F  M   G   +  T   +L AC  L  ++  K  HG A++      + +  
Sbjct: 242 DSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFT 301

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
            +L+++Y     + +ARR+FE +  KD + W+ MI  YA+   + +++ LF RM      
Sbjct: 302 NSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSG 361

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           P+Q TF++VL AC  +  L  G  IHS +V+ G  ++  V  AL+D+Y+KCG +  S  +
Sbjct: 362 PDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRV 421

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F E P ++ V+W+ M+ GY   G   +A+ +   M    V      ++S+L AC+    +
Sbjct: 422 FDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLV 481

Query: 461 EPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDARLVFDMMN-DWNEVSWNAMI 517
             G ++    ++  Y++   +++   ++D+  + G + +A ++   M        W A++
Sbjct: 482 VEGKEIF-YKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALL 540

Query: 518 SGYSMHG------LSAEVLKVFDL 535
           +   +H       +SA+  KVFD+
Sbjct: 541 TASRLHKNIKLAEISAQ--KVFDM 562



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 155/310 (50%), Gaps = 11/310 (3%)

Query: 348 SVLQACATMEGLDLGNQIHSLVVRVGLL-SDVFVSNALMDVYAKCGRMENSVELFAESPK 406
           ++LQ+    +    G Q+H+ ++   +L ++ +++  L   YA CG M  +  +F     
Sbjct: 64  ALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVL 123

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
           +N   WN MI GY   G   K+++++ +ML     A   TY  VL+AC  L  +E G +V
Sbjct: 124 KNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRV 183

Query: 467 HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLS 526
           H   V    + D+ V N+L+ MYAK G +  AR+VFD M + +  SWN MISGY+ +  S
Sbjct: 184 HSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADS 243

Query: 527 AEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY-- 584
                VFDLM + G   +  T +G+LSAC++   +++G+     ++  Y +   I +Y  
Sbjct: 244 GTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGK-----VIHGYAVRNSIGNYNK 298

Query: 585 ---TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
               S++ +      +  A +L E + ++ +V     +LG     +  E  RL  +  LD
Sbjct: 299 FFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALD 358

Query: 642 FEPEDEATHV 651
               D+ T +
Sbjct: 359 GSGPDQVTFI 368



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 148/319 (46%), Gaps = 21/319 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           ++ +Y   L++C     ++    +H +V+  G   D++  N LL +Y K   +  A  +F
Sbjct: 160 DNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVF 219

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D M ER+  S+ T I GY  ++    A  +F  + + G   +       L     +   +
Sbjct: 220 DRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVK 279

Query: 175 LCPCV--FACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------------- 219
               +  +A    +G + N F   +LI+ +  C C+  AR++F+ +              
Sbjct: 280 EGKVIHGYAVRNSIG-NYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILG 338

Query: 220 ----NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
                D F E+L  F +M   G  P+  TF  VL AC  +  +R   S H   +K  ++ 
Sbjct: 339 YARNGDAF-ESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDA 397

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
           +  V  AL+D+Y+K G ++ +RR+F+EMP K ++ WS M+A Y       +A+ +   M+
Sbjct: 398 NTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMK 457

Query: 336 QAFVAPNQFTFVSVLQACA 354
              V P+   F S+L AC+
Sbjct: 458 ANSVIPDNGVFTSILSACS 476



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 81/164 (49%), Gaps = 2/164 (1%)

Query: 438 EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN-YDMDVVVANALIDMYAKCGSIT 496
           +Q P T +   ++L++  +  + + G Q+H   +  +  + +  +   L   YA CG ++
Sbjct: 53  QQYPLTSLQCGALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMS 112

Query: 497 DARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS 556
            A ++FD +   N   WN MI GY+ +GL  + L ++  M   G R +N T+  VL AC 
Sbjct: 113 QAEVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACG 172

Query: 557 NGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKA 600
           +  L+E G      +V   G+E  I    S++++  + G +  A
Sbjct: 173 DLLLVEIGRRVHSEVVV-CGLESDIYVGNSLLAMYAKFGDMGTA 215


>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
          Length = 633

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 228/577 (39%), Positives = 355/577 (61%), Gaps = 12/577 (2%)

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           P    +  ++ AC     +  A++ H    ++C   D ++  +L+ +Y K G +S+AR +
Sbjct: 58  PTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHV 117

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL 359
           F++MP +DV+ W+++IA YAQ  +  +A+ L   M +A   PN FTF S+L+A     G 
Sbjct: 118 FDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGC 177

Query: 360 DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGY 419
            +G Q+H+L V+     DV+V +AL+D+YA+C +M+ ++ +F     +N V+WN +I G+
Sbjct: 178 SIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGF 237

Query: 420 VQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDV 479
            +  +    ++ F++M      AT  TYSS+  A A + ALE G  VH   +K+   +  
Sbjct: 238 ARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTA 297

Query: 480 VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
            V N ++ MYAK GS+ DAR VFD M+  + V+WN M++  + +GL  E +  F+ +++ 
Sbjct: 298 FVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKC 357

Query: 540 GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDK 599
           G + N +TF+ VL+ACS+GGL+++G+ YF  M+ +Y ++P I+HY S V LLGRAG L +
Sbjct: 358 GIQLNQITFLSVLTACSHGGLVKEGKHYF-DMMKDYNVQPEIDHYVSFVDLLGRAGLLKE 416

Query: 600 AAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAM 659
           A   +  +P +P+  +W ALLGAC +H N ++G+ +A H+ + +P+D    VLL NIYA 
Sbjct: 417 ALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYAS 476

Query: 660 ARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMK 708
              W  AA            KEP  SW++ +  VH F A D +H     I  M E +NM+
Sbjct: 477 TGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIYRMWEEINMR 536

Query: 709 SRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDC 768
            +KAGY+P+ + VL  + E E+E  L  HSEK+ALAFAL  MP  + IRI+KN+RIC DC
Sbjct: 537 IKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGASIRIMKNIRICGDC 596

Query: 769 HTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           H+A K +SK+ +REI++RD +RFHHF +G CSCGD+W
Sbjct: 597 HSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 633



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 174/363 (47%), Gaps = 16/363 (4%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           Y + + +C Q  +L  A  IH  + +     D F  N L+++Y K   + DA  +FD+MP
Sbjct: 63  YHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMP 122

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
            R+ +S+   I GY  +    EA+GL   + R     N F FT+ LK   + G   +   
Sbjct: 123 SRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQ 182

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDC---------------- 222
           + A   K   D + +VG+AL+D ++ C  ++ A  VFD L +                  
Sbjct: 183 MHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKAD 242

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
            E  L  F++M+  GF   +FT++ +  A   +  +   +  H   +K+  ++  +V   
Sbjct: 243 GETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNT 302

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           +L +Y KSG + +AR++F+ M K+D++ W+ M+   AQ  L  +AV  F  +R+  +  N
Sbjct: 303 MLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLN 362

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           Q TF+SVL AC+    +  G     ++    +  ++    + +D+  + G ++ ++    
Sbjct: 363 QITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVF 422

Query: 403 ESP 405
           + P
Sbjct: 423 KMP 425



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 150/284 (52%), Gaps = 2/284 (0%)

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           +AP    + S++ ACA  + L     IH+ + R  L  D F+ N+L+ +Y KCG + ++ 
Sbjct: 56  LAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDAR 115

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            +F + P R+ V+W  +I GY Q     +A+ +   ML  +      T++S+L+A  +  
Sbjct: 116 HVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACG 175

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
               G Q+H L VK N+D DV V +AL+DMYA+C  +  A +VFD +   NEVSWNA+I+
Sbjct: 176 GCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIA 235

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           G++        L  F  MQ+ G+   + T+  + SA +  G LEQG      ++ + G +
Sbjct: 236 GFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKS-GQK 294

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
                  +M+ +  ++G +  A K+ + +  +  ++ W  +L A
Sbjct: 295 LTAFVGNTMLGMYAKSGSMVDARKVFDRMD-KRDLVTWNTMLTA 337



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 166/351 (47%), Gaps = 17/351 (4%)

Query: 190 SNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQM 233
            +AF+  +LI  +  CG V  AR VFD +                 N    EA+     M
Sbjct: 93  GDAFLLNSLIHMYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDM 152

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
               F+PN FTF  +LKA        + +  H  A+K  ++ D+YV  ALLD+Y +  ++
Sbjct: 153 LRARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQM 212

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
             A  +F+ +  K+ + W+ +IA +A+       +  F  M++       FT+ S+  A 
Sbjct: 213 DMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAF 272

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
           A +  L+ G  +H+ +++ G     FV N ++ +YAK G M ++ ++F    KR+ VTWN
Sbjct: 273 ARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWN 332

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
           TM+    Q G   +A+  F ++ +  +   ++T+ SVL AC+    ++ G     +    
Sbjct: 333 TMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDY 392

Query: 474 NYDMDVVVANALIDMYAKCGSITDARL-VFDMMNDWNEVSWNAMISGYSMH 523
           N   ++    + +D+  + G + +A + VF M  +     W A++    MH
Sbjct: 393 NVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMH 443



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 2/184 (1%)

Query: 439 QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDA 498
           ++  T   Y S++ ACA    L     +H    ++    D  + N+LI MY KCG+++DA
Sbjct: 55  ELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDA 114

Query: 499 RLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNG 558
           R VFD M   + VSW  +I+GY+ + + AE + +   M +  +RPN  TF  +L A    
Sbjct: 115 RHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGAC 174

Query: 559 GLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRA 618
           G    GE    ++   Y  +  +   ++++ +  R   +D A  + + +  +  V  W A
Sbjct: 175 GGCSIGEQ-MHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVS-WNA 232

Query: 619 LLGA 622
           L+  
Sbjct: 233 LIAG 236



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 3/143 (2%)

Query: 22  NAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQ 81
           NA + G + +A   T     +      F  + F   +Y++   +  +   L+    +H  
Sbjct: 231 NALIAGFARKADGETTLMKFAEMQRNGFGATHF---TYSSMFSAFARIGALEQGRWVHAH 287

Query: 82  VLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEA 141
           ++K G  L  F  N +L +Y K   + DA K+FD M +R+ +++ T +          EA
Sbjct: 288 LIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEA 347

Query: 142 VGLFSTLHREGHELNPFAFTAFL 164
           V  F  + + G +LN   F + L
Sbjct: 348 VAHFEEIRKCGIQLNQITFLSVL 370


>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
          Length = 855

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 284/855 (33%), Positives = 432/855 (50%), Gaps = 124/855 (14%)

Query: 56  SHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFD 115
           + + A +L+SC     L  A  +H +++  G    +F  N LL+ Y+    L DA +L  
Sbjct: 20  TQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLR 79

Query: 116 -EMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS----- 169
            ++ E N I+    + GY       +A  LF  + R           A    L+S     
Sbjct: 80  ADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRD--------VASWNTLMSDTSRP 131

Query: 170 ---------MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-- 218
                    +G  EL P +    +K     +  V TAL+D F  CG V+FA ++F  +  
Sbjct: 132 AGSWMSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIER 191

Query: 219 -------------------------FNDCFE--------------------EALNFFSQM 233
                                    F D  E                    EAL    +M
Sbjct: 192 PTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEM 251

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
              G + ++ T+   L AC  L ++   K  H   +++  ++D YVA AL++LY K G  
Sbjct: 252 HRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSF 311

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
             A+R+F  +  ++ + W+ +I    Q +    +VELF +MR   +A +QF   +++  C
Sbjct: 312 KEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC 371

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
                L LG Q+HSL ++ G    + VSN+L+ +YAKCG ++N+  +F+   +R+ V+W 
Sbjct: 372 FNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWT 431

Query: 414 TMIVGYVQLGEVGKA-------------------------------MIMFSKMLEEQ-VP 441
           +MI  Y Q+G + KA                               + M+S ML ++ V 
Sbjct: 432 SMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVT 491

Query: 442 ATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLV 501
              VTY ++ R CA + A + G Q+   TVKA   ++V VANA I MY+KCG I++A+ +
Sbjct: 492 PDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKL 551

Query: 502 FDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLL 561
           FD++N  + VSWNAMI+GYS HG+  +  K FD M  +G +P+ +++V VLS CS+ GL+
Sbjct: 552 FDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLV 611

Query: 562 EQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLG 621
           ++G+ YF  M   +GI P +EH++ MV LLGRAGHL +A  LI+ +P +P+  +W ALL 
Sbjct: 612 QEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLS 671

Query: 622 ACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKE 670
           AC IH N E+  L+A+H+ + +  D  +++LL+ IY+ A   + +A            K 
Sbjct: 672 ACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKN 731

Query: 671 PGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEK 730
           PG SW+E +  VH F+A D SH  +  IR  ++ L  K    GY+             E 
Sbjct: 732 PGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGYV-----------RTES 780

Query: 731 ERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHR 790
            R    HSEKLA+AF +  +P   PI I+KNLRIC DCHT IK+IS +  RE +IRD  R
Sbjct: 781 PRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVR 840

Query: 791 FHHFQDGCCSCGDFW 805
           FHHF+ G CSCGD+W
Sbjct: 841 FHHFKSGSCSCGDYW 855



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 90/418 (21%), Positives = 183/418 (43%), Gaps = 58/418 (13%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
             +S +Y +SL +C +   L     +H +V++    +D +  + L+ +Y K     +A +
Sbjct: 257 RLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKR 316

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +F+ + +RN++S+   I G      F ++V LF+ +  E   ++ FA    L  L+S  +
Sbjct: 317 VFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFA----LATLISGCF 372

Query: 173 AELCPCVFACVYKL----GHD-----SNAFVG--------------------------TA 197
             +  C+   ++ L    GH+     SN+ +                           T+
Sbjct: 373 NRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTS 432

Query: 198 LIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRA-VGFKP 240
           +I A+S  G +  AR+ FDG+                 +   E+ L  +S M +     P
Sbjct: 433 MITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTP 492

Query: 241 NNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIF 300
           +  T+  + + C  +   ++     G  +K    +++ VA A + +Y+K G IS A+++F
Sbjct: 493 DWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLF 552

Query: 301 EEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLD 360
           + +  KDV+ W+ MI  Y+Q  +   A + F  M      P+  ++V+VL  C+    + 
Sbjct: 553 DLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQ 612

Query: 361 LGNQIHSLVVRV-GLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMI 416
            G     ++ RV G+   +   + ++D+  + G +  + +L  + P K     W  ++
Sbjct: 613 EGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALL 670


>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
          Length = 734

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 268/705 (38%), Positives = 393/705 (55%), Gaps = 29/705 (4%)

Query: 129 IQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGH 188
           ++     S    A+  F  +   G       FT+ LK+  + G       V A +   G 
Sbjct: 31  LRASAARSDLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGI 90

Query: 189 DSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQ 232
           DS A   TAL + ++ C     AR+VFD +                 N     A+    +
Sbjct: 91  DSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVR 150

Query: 233 MRAV-GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
           M+   G +P++ T   VL AC     +   + AH  A+++  E  + VA A+LD Y K G
Sbjct: 151 MQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCG 210

Query: 292 EISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQ 351
           +I  AR +F+ MP K+ + W+ MI  YAQ   S +A+ LF RM +  V     + ++ LQ
Sbjct: 211 DIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQ 270

Query: 352 ACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
           AC  +  LD G ++H L+VR+GL S+V V NAL+ +Y+KC R++ +  +F E  +R  V+
Sbjct: 271 ACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVS 330

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
           WN MI+G  Q G    A+ +F++M  E V     T  SV+ A A ++       +H  ++
Sbjct: 331 WNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSI 390

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
           + + D DV V  ALIDMYAKCG +  AR++F+   + + ++WNAMI GY  HG     ++
Sbjct: 391 RLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVE 450

Query: 532 VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLL 591
           +F+ M+  G  PN  TF+ VLSACS+ GL+++G  YF SM  +YG+EP +EHY +MV LL
Sbjct: 451 LFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLL 510

Query: 592 GRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHV 651
           GRAG LD+A   I+ +P  P + ++ A+LGAC +H NVE+   SAQ I +  P++   HV
Sbjct: 511 GRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHV 570

Query: 652 LLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRG 700
           LL+NIYA A  W+  A            K PG S I+ +  +H F +G T+H     I  
Sbjct: 571 LLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYS 630

Query: 701 MLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIK 760
            L  L  + +  GY+PD  ++  DV +D K + L  HSEKLA+AF L +  P + I+I K
Sbjct: 631 RLAKLIEEIKAVGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKK 689

Query: 761 NLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           NLR+C DCH A K+IS +  REII+RD+ RFHHF+DG CSCGD+W
Sbjct: 690 NLRVCNDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 139/507 (27%), Positives = 236/507 (46%), Gaps = 25/507 (4%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           ++ + L+ C    DL T   +H Q+  +G   +  A   L N+Y K  R  DA ++FD M
Sbjct: 61  TFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRM 120

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLH-REGHELNPFAFTAFLKVLVSMGWAELC 176
           P R+ +++   + GY  +     A+ +   +   EG   +     + L    +      C
Sbjct: 121 PVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAAC 180

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FN 220
               A   + G +    V TA++DA+  CG +  AR VFD +                 N
Sbjct: 181 REAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQN 240

Query: 221 DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
               EAL  F++M   G    + +    L+AC  L  +      H   ++   + ++ V 
Sbjct: 241 GDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVM 300

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
            AL+ +Y+K   +  A  +F+E+ ++  + W+ MI   AQ   S DAV LF RM+   V 
Sbjct: 301 NALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVK 360

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           P+ FT VSV+ A A +        IH   +R+ L  DV+V  AL+D+YAKCGR+  +  L
Sbjct: 361 PDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARIL 420

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F  + +R+ +TWN MI GY   G    A+ +F +M    +   E T+ SVL AC+    +
Sbjct: 421 FNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLV 480

Query: 461 EPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMI 517
           + G + +  ++K +Y ++  + +   ++D+  + G + +A   +  M  D     + AM+
Sbjct: 481 DEGRE-YFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAML 539

Query: 518 SGYSMHG---LSAE-VLKVFDLMQQRG 540
               +H    L+ E   K+F+L  Q G
Sbjct: 540 GACKLHKNVELAEESAQKIFELGPQEG 566


>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
          Length = 637

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 230/569 (40%), Positives = 354/569 (62%), Gaps = 12/569 (2%)

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
           ++ AC    ++  A++ H     + +   +++  +L+ LY K G +++ARR+F+ MP +D
Sbjct: 70  LITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARD 129

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
           +  W+ +IA YAQ D+  +A+ L   M +    PN FTF S+L+A        +G QIH+
Sbjct: 130 MCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHA 189

Query: 368 LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK 427
           L V+     DV+V +AL+D+YA+CGRM+ ++ +F +   +N V+WN +I G+ + G+   
Sbjct: 190 LTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGET 249

Query: 428 AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALID 487
            ++MF++M      AT  TYSSV  A A + ALE G  VH   +K+   +   V N ++D
Sbjct: 250 TLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILD 309

Query: 488 MYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLT 547
           MYAK GS+ DAR VFD ++  + V+WN+M++ ++ +GL  E +  F+ M++ G   N +T
Sbjct: 310 MYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQIT 369

Query: 548 FVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGI 607
           F+ +L+ACS+GGL+++G+ YF  M+  Y +EP I+HY ++V LLGRAG L+ A   I  +
Sbjct: 370 FLSILTACSHGGLVKEGKQYF-DMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKM 428

Query: 608 PFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA 667
           P +P+  +W ALLG+C +H N +IG+ +A H+ + +P+D    VLL NIYA    W+ AA
Sbjct: 429 PMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAA 488

Query: 668 -----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIP 716
                       KEP  SW+E +  VH F A D +H     I    E ++++ RKAGY+P
Sbjct: 489 RVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVP 548

Query: 717 DLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIIS 776
           +   VL  V E E++  L  HSEK+ALAFAL  MP  + IRI+KN+RIC DCH+A + IS
Sbjct: 549 NTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYIS 608

Query: 777 KIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           K+ +REI++RD +RFHHF  G CSCGD+W
Sbjct: 609 KVFKREIVVRDTNRFHHFSSGSCSCGDYW 637



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 175/351 (49%), Gaps = 17/351 (4%)

Query: 190 SNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQM 233
            + F+  +LI  +  CG V  AR+VFDG+                 ND  +EAL     M
Sbjct: 97  GSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGM 156

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
               FKPN FTFA +LKA     +  + +  H   +K  +  D+YV  ALLD+Y + G +
Sbjct: 157 LRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRM 216

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
             A  +F+++  K+ + W+ +IA +A+       + +F  M++       FT+ SV  A 
Sbjct: 217 DMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAI 276

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
           A +  L+ G  +H+ +++ G     FV N ++D+YAK G M ++ ++F    K++ VTWN
Sbjct: 277 AGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWN 336

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
           +M+  + Q G   +A+  F +M +  V   ++T+ S+L AC+    ++ G Q   +  + 
Sbjct: 337 SMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEY 396

Query: 474 NYDMDVVVANALIDMYAKCGSITDARL-VFDMMNDWNEVSWNAMISGYSMH 523
           N + ++     ++D+  + G + DA + +F M        W A++    MH
Sbjct: 397 NLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMH 447



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 181/375 (48%), Gaps = 17/375 (4%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           Y + + +C +   L  A  IH  +        +F  N L+++Y K   + DA ++FD MP
Sbjct: 67  YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
            R+  S+ + I GY  +    EA+GL   + R   + N F F + LK   +   + +   
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 186

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF-------- 223
           + A   K     + +VG+AL+D ++ CG ++ A  VFD L       +N           
Sbjct: 187 IHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGD 246

Query: 224 -EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
            E  L  F++M+  GF+  +FT++ V  A  G+  +   K  H   +K+   +  +V   
Sbjct: 247 GETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNT 306

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           +LD+Y KSG + +AR++F+ + KKDV+ W+ M+  +AQ  L  +AV  F  MR+  V  N
Sbjct: 307 ILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLN 366

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           Q TF+S+L AC+    +  G Q   ++    L  ++     ++D+  + G + +++    
Sbjct: 367 QITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIF 426

Query: 403 ESP-KRNHVTWNTMI 416
           + P K     W  ++
Sbjct: 427 KMPMKPTAAVWGALL 441



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 161/315 (51%), Gaps = 14/315 (4%)

Query: 324 SIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNA 383
           S+DA EL    R          + S++ ACA    LD    IH+ +        VF+ N+
Sbjct: 54  SVDARELAATPR---------LYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNS 104

Query: 384 LMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPAT 443
           L+ +Y KCG + ++  +F   P R+  +W ++I GY Q     +A+ +   ML  +    
Sbjct: 105 LIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPN 164

Query: 444 EVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFD 503
             T++S+L+A  + A+   G Q+H LTVK ++  DV V +AL+DMYA+CG +  A  VFD
Sbjct: 165 GFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFD 224

Query: 504 MMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQ 563
            +   N VSWNA+I+G++  G     L +F  MQ+ G+   + T+  V SA +  G LEQ
Sbjct: 225 QLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQ 284

Query: 564 GEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGAC 623
           G+     M+ + G         +++ +  ++G +  A K+ + +  +  V+ W ++L A 
Sbjct: 285 GKWVHAHMIKS-GERLSAFVGNTILDMYAKSGSMIDARKVFDRVD-KKDVVTWNSMLTAF 342

Query: 624 IIHNNVEIGRLSAQH 638
             +    +GR +  H
Sbjct: 343 AQYG---LGREAVTH 354



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 119/268 (44%), Gaps = 16/268 (5%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  ++A+ L++   +        IH   +K     D++  + LL++Y +  R+  A  +F
Sbjct: 164 NGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVF 223

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D++  +N +S+   I G+         + +F+ + R G E   F +++    +  +G  E
Sbjct: 224 DQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALE 283

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF---- 223
               V A + K G   +AFVG  ++D ++  G +  ARKVFD +       +N       
Sbjct: 284 QGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFA 343

Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                 EA+  F +MR  G   N  TF  +L AC     ++  K       +   E ++ 
Sbjct: 344 QYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEID 403

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKK 306
             V ++DL  ++G +++A     +MP K
Sbjct: 404 HYVTVVDLLGRAGLLNDALVFIFKMPMK 431


>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
           [Vitis vinifera]
 gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
          Length = 742

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 252/642 (39%), Positives = 379/642 (59%), Gaps = 28/642 (4%)

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFDG-------LFN---------DCFEEALNFFSQMR 234
           + F+ T  ++A    G + +ARKVFD        L+N         + F +A+  +S+M+
Sbjct: 102 SGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQ 161

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
           A G  P+ FT   VLKAC G+  + V K  HG   +  +E D++V   L+ LY K G + 
Sbjct: 162 ASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVE 221

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
            AR +FE +  ++++ W+ MI+ Y Q  L ++A+ +F +MRQ  V P+    VSVL+A  
Sbjct: 222 QARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYT 281

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
            +E L+ G  IH  VV++GL  +  +  +L  +YAKCG++  +   F +    N + WN 
Sbjct: 282 DVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNA 341

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
           MI GY + G   +A+ +F +M+ + +    +T  S + ACA + +L+    +     K  
Sbjct: 342 MISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTE 401

Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
           Y  DV V  ALIDM+AKCGS+  AR VFD   D + V W+AMI GY +HG   + + +F 
Sbjct: 402 YRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFY 461

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
            M+Q G  PN++TFVG+L+AC++ GL+E+G   F SM   YGIE   +HY  +V LLGR+
Sbjct: 462 AMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSM-KYYGIEARHQHYACVVDLLGRS 520

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLS 654
           GHL++A   I  +P +P V +W ALLGAC I+ +V +G  +A+ +   +P +   +V LS
Sbjct: 521 GHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLS 580

Query: 655 NIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLE 703
           N+YA +R W           EK  SK+ G S IE  G +  FR GD SH     I   LE
Sbjct: 581 NLYASSRLWDSVAKVRILMREKGLSKDLGYSLIEINGKLQAFRVGDKSHPRFKEIFEELE 640

Query: 704 WLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLR 763
            L  + ++AG+IP + +VL D+ ++EKE  L  HSE+LA+A+ L    P + +RI KNLR
Sbjct: 641 SLERRLKEAGFIPHIESVLHDLNQEEKEETLCNHSERLAIAYGLISTAPGTTLRITKNLR 700

Query: 764 ICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            C++CH+A K+ISK+V REI++RD +RFHHF++G CSC D+W
Sbjct: 701 ACINCHSATKLISKLVNREIVVRDANRFHHFKNGVCSCRDYW 742



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/436 (28%), Positives = 212/436 (48%), Gaps = 20/436 (4%)

Query: 47  ITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNR 106
           I +S  +F+S  +++ L   +    L     IH Q++  G     F     +N    +  
Sbjct: 63  IPYSGFDFDSF-FSSLLDHSVHKRHLNQ---IHAQLVVSGLVESGFLVTKFVNASWNIGE 118

Query: 107 LPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV 166
           +  A K+FDE PE +   +   I+GY+  + F +A+ ++S +   G   + F     LK 
Sbjct: 119 IGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKA 178

Query: 167 LVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------- 218
              +   E+   V   +++LG +S+ FV   L+  ++ CG VE AR VF+GL        
Sbjct: 179 CSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSW 238

Query: 219 --------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALK 270
                    N    EAL  F QMR    KP+      VL+A   ++ +   KS HGC +K
Sbjct: 239 TSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVK 298

Query: 271 TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVEL 330
              E +  + ++L  +Y K G++  AR  F++M   +V+ W+ MI+ YA+   + +AV L
Sbjct: 299 MGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGL 358

Query: 331 FCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAK 390
           F  M    +  +  T  S + ACA +  LDL   +   + +    +DVFV+ AL+D++AK
Sbjct: 359 FQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAK 418

Query: 391 CGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
           CG ++ + E+F  +  ++ V W+ MIVGY   G    A+ +F  M +  V   +VT+  +
Sbjct: 419 CGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGL 478

Query: 451 LRACASLAALEPGMQV 466
           L AC     +E G ++
Sbjct: 479 LTACNHSGLVEEGWEL 494



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 140/260 (53%), Gaps = 2/260 (0%)

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
           NQIH+ +V  GL+   F+    ++     G +  + ++F E P+ +   WN +I GY   
Sbjct: 88  NQIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSH 147

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
              G A+ M+S+M    V     T   VL+AC+ +  LE G +VH    +  ++ DV V 
Sbjct: 148 NFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQ 207

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
           N L+ +YAKCG +  AR+VF+ ++D N VSW +MISGY  +GL  E L++F  M+QR  +
Sbjct: 208 NGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVK 267

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           P+ +  V VL A ++   LEQG++     V   G+E   +   S+ ++  + G +  A  
Sbjct: 268 PDWIALVSVLRAYTDVEDLEQGKS-IHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARS 326

Query: 603 LIEGIPFQPSVMIWRALLGA 622
             + +   P+VM+W A++  
Sbjct: 327 FFDQMEI-PNVMMWNAMISG 345



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/384 (25%), Positives = 175/384 (45%), Gaps = 22/384 (5%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L++C     L+    +H Q+ + G   D+F  N L+ +Y K  R+  A  +F+ + +RN 
Sbjct: 176 LKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNI 235

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +S+ + I GY  +   +EA+ +F  + +   + +  A  + L+    +   E    +  C
Sbjct: 236 VSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGC 295

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEA 226
           V K+G +    +  +L   ++ CG V  AR  FD +                 N    EA
Sbjct: 296 VVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEA 355

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           +  F +M +   + ++ T    + AC  + ++ +AK       KT Y  D++V  AL+D+
Sbjct: 356 VGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDM 415

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           + K G +  AR +F+    KDV+ WS MI  Y       DA++LF  M+QA V PN  TF
Sbjct: 416 FAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTF 475

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
           V +L AC     ++ G ++   +   G+ +       ++D+  + G +  + +     P 
Sbjct: 476 VGLLTACNHSGLVEEGWELFHSMKYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPI 535

Query: 407 RNHVT-WNTM-----IVGYVQLGE 424
              V+ W  +     I  +V LGE
Sbjct: 536 EPGVSVWGALLGACKIYRHVTLGE 559


>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
           DEFECTIVE 2261; Flags: Precursor
 gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 273/797 (34%), Positives = 443/797 (55%), Gaps = 45/797 (5%)

Query: 51  VSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDA 110
           +   +S ++++ L+SCI+  D +    +H ++++     D    N L+++Y K      A
Sbjct: 57  IRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKA 116

Query: 111 TKLFDEM---PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVL 167
             +F+ M    +R+ +S+   +  Y  + + ++A+ +F      G   N + +TA ++  
Sbjct: 117 EDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRAC 176

Query: 168 VSMGWAELCPCVFACVYKLGH-DSNAFVGTALIDAFSVCG--CVEFARKVFDGL------ 218
            +  +  +       + K GH +S+  VG +LID F V G    E A KVFD +      
Sbjct: 177 SNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMF-VKGENSFENAYKVFDKMSELNVV 235

Query: 219 -----FNDCFE-----EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCA 268
                   C +     EA+ FF  M   GF+ + FT + V  AC  L+ + + K  H  A
Sbjct: 236 TWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWA 295

Query: 269 LKTCYEMDLYVAVALLDLYTK---SGEISNARRIFEEMPKKDVIPWSFMIARYAQT-DLS 324
           +++    D  V  +L+D+Y K    G + + R++F+ M    V+ W+ +I  Y +  +L+
Sbjct: 296 IRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLA 353

Query: 325 IDAVELFCRM-RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNA 383
            +A+ LF  M  Q  V PN FTF S  +AC  +    +G Q+     + GL S+  V+N+
Sbjct: 354 TEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANS 413

Query: 384 LMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPAT 443
           ++ ++ K  RME++   F    ++N V++NT + G  +     +A  + S++ E ++  +
Sbjct: 414 VISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVS 473

Query: 444 EVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFD 503
             T++S+L   A++ ++  G Q+H   VK     +  V NALI MY+KCGSI  A  VF+
Sbjct: 474 AFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFN 533

Query: 504 MMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQ 563
            M + N +SW +MI+G++ HG +  VL+ F+ M + G +PN +T+V +LSACS+ GL+ +
Sbjct: 534 FMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSE 593

Query: 564 GEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGAC 623
           G  +F SM  ++ I+P +EHY  MV LL RAG L  A + I  +PFQ  V++WR  LGAC
Sbjct: 594 GWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGAC 653

Query: 624 IIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPG 672
            +H+N E+G+L+A+ IL+ +P + A ++ LSNIYA A  WE++             KE G
Sbjct: 654 RVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGG 713

Query: 673 LSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDV----RED 728
            SWIE    +H F  GDT+H + + I   L+ L  + ++ GY+PD   VL  +     E 
Sbjct: 714 CSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEA 773

Query: 729 EKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDV 788
           EKER L+ HSEK+A+AF L     S P+R+ KNLR+C DCH A+K IS +  REI++RD+
Sbjct: 774 EKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDL 833

Query: 789 HRFHHFQDGCCSCGDFW 805
           +RFHHF+DG CSC D+W
Sbjct: 834 NRFHHFKDGKCSCNDYW 850



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 138/313 (44%), Gaps = 31/313 (9%)

Query: 23  AWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQV 82
           A + G      L+T+   N  +  IT    E N  +++++ ++C    D +    +  Q 
Sbjct: 341 ALITGYMKNCNLATEAI-NLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQA 399

Query: 83  LKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAV 142
            K+G   +    N +++++VK +R+ DA + F+ + E+N +S+ T + G   +  F +A 
Sbjct: 400 FKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAF 459

Query: 143 GLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAF 202
            L S +      ++ F F + L  + ++G       + + V KLG   N  V  ALI  +
Sbjct: 460 KLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMY 519

Query: 203 SVCGCVEFARKVFD---------------GLFNDCFE-EALNFFSQMRAVGFKPNNFTFA 246
           S CG ++ A +VF+               G     F    L  F+QM   G KPN  T+ 
Sbjct: 520 SKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYV 579

Query: 247 FVLKACLGLDTIRVAKSAHGCALKTCYE-------MDLYVAVALLDLYTKSGEISNARRI 299
            +L AC  +  +    S       + YE       M+ Y    ++DL  ++G +++A   
Sbjct: 580 AILSACSHVGLV----SEGWRHFNSMYEDHKIKPKMEHY--ACMVDLLCRAGLLTDAFEF 633

Query: 300 FEEMP-KKDVIPW 311
              MP + DV+ W
Sbjct: 634 INTMPFQADVLVW 646


>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 624

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 234/577 (40%), Positives = 351/577 (60%), Gaps = 12/577 (2%)

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           P    +   + AC     +  A+  H     + +  D ++  +L+ LY K G +  AR++
Sbjct: 49  PTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKV 108

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL 359
           F+EM +KD++ W+ +IA YAQ D+  +A+ L   M +    PN FTF S+L+A       
Sbjct: 109 FDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADS 168

Query: 360 DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGY 419
            +G QIH+L V+     DV+V +AL+D+YA+CG M+ +  +F +   +N V+WN +I G+
Sbjct: 169 GIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGF 228

Query: 420 VQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDV 479
            + G+   A++ F++ML     AT  TYSSV  + A L ALE G  VH   +K+   M  
Sbjct: 229 ARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTA 288

Query: 480 VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
              N L+DMYAK GS+ DAR VFD ++D + V+WN M++ ++ +GL  E +  F+ M++ 
Sbjct: 289 FAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKS 348

Query: 540 GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDK 599
           G   N +TF+ +L+ACS+GGL+++G+ YF+ M+  Y +EP I+H+ ++V+LLGRAG L+ 
Sbjct: 349 GIYLNQVTFLCILTACSHGGLVKEGKRYFE-MMKEYDLEPEIDHFVTVVALLGRAGLLNF 407

Query: 600 AAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAM 659
           A   I  +P +P+  +W ALL AC +H N ++G+ +A H+ + +P+D    VLL NIYA 
Sbjct: 408 ALVFIFKMPIEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYAS 467

Query: 660 ARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMK 708
              W+ AA            KEP  SW+E +  VH F A D +H     I  M   ++ K
Sbjct: 468 TGQWDAAARVRRIMKTTGVKKEPACSWVEMENSVHMFVANDDTHPRAEEIYKMWGQISKK 527

Query: 709 SRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDC 768
            RK GY+PD+  VL  V + E+E  L  HSEKLALAFAL +MP  + IRI+KN+RIC DC
Sbjct: 528 IRKEGYVPDMDYVLLRVDDQEREANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDC 587

Query: 769 HTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           H+A K ISK+  REI++RD +RFHHF +G CSC D+W
Sbjct: 588 HSAFKYISKVFGREIVVRDTNRFHHFSNGSCSCADYW 624



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 169/347 (48%), Gaps = 29/347 (8%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           Y T + +C Q+ +L+ A  +H  +       D F  N L+++Y K   + +A K+FDEM 
Sbjct: 54  YHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMR 113

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
            ++ +S+ + I GY  +    EA+GL   + +   + N F F + LK   +   + +   
Sbjct: 114 RKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQ 173

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF-------- 223
           + A   K     + +VG+AL+D ++ CG ++ A  VFD L       +N           
Sbjct: 174 IHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGD 233

Query: 224 -EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
            E AL  F++M   GF+  +FT++ V  +   L  +   K  H   +K+  +M  +    
Sbjct: 234 GETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNT 293

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           LLD+Y KSG + +AR++F+ +  KD++ W+ M+  +AQ  L  +AV  F  MR++ +  N
Sbjct: 294 LLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLN 353

Query: 343 QFTFVSVLQACA-------------TMEGLDLGNQIHSLVVRVGLLS 376
           Q TF+ +L AC+              M+  DL  +I   V  V LL 
Sbjct: 354 QVTFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHFVTVVALLG 400



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 171/353 (48%), Gaps = 21/353 (5%)

Query: 190 SNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQM 233
            +AF+  +LI  +  CG V  ARKVFD +                 ND  EEA+     M
Sbjct: 84  GDAFLDNSLIHLYCKCGSVLEARKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGM 143

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
               FKPN FTFA +LKA        + +  H  A+K  +  D+YV  ALLD+Y + G +
Sbjct: 144 LKGRFKPNGFTFASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMM 203

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
             A  +F+++  K+ + W+ +I+ +A+      A+  F  M +       FT+ SV  + 
Sbjct: 204 DMATAVFDKLDSKNGVSWNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSI 263

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
           A +  L+ G  +H+ +++       F  N L+D+YAK G M ++ ++F     ++ VTWN
Sbjct: 264 ARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWN 323

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
           TM+  + Q G   +A+  F +M +  +   +VT+  +L AC+    ++ G +     +  
Sbjct: 324 TMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKRY--FEMMK 381

Query: 474 NYDMDVVVAN--ALIDMYAKCGSITDARL-VFDMMNDWNEVSWNAMISGYSMH 523
            YD++  + +   ++ +  + G +  A + +F M  +     W A+++   MH
Sbjct: 382 EYDLEPEIDHFVTVVALLGRAGLLNFALVFIFKMPIEPTAAVWGALLAACRMH 434



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 149/284 (52%), Gaps = 2/284 (0%)

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           +AP    + + + ACA  + L+   ++H+ +       D F+ N+L+ +Y KCG +  + 
Sbjct: 47  LAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEAR 106

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
           ++F E  +++ V+W ++I GY Q     +A+ +   ML+ +      T++S+L+A  + A
Sbjct: 107 KVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHA 166

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
               G Q+H L VK ++  DV V +AL+DMYA+CG +  A  VFD ++  N VSWNA+IS
Sbjct: 167 DSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALIS 226

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           G++  G     L  F  M + G+   + T+  V S+ +  G LEQG+     M+ +    
Sbjct: 227 GFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKM 286

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
                 T ++ +  ++G +  A K+ + +     ++ W  +L A
Sbjct: 287 TAFAGNT-LLDMYAKSGSMIDARKVFDRVD-DKDLVTWNTMLTA 328



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 105/223 (47%), Gaps = 10/223 (4%)

Query: 439 QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDA 498
           ++  T   Y + + ACA    LE   +VH     + +  D  + N+LI +Y KCGS+ +A
Sbjct: 46  ELAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEA 105

Query: 499 RLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSAC--- 555
           R VFD M   + VSW ++I+GY+ + +  E + +   M +  ++PN  TF  +L A    
Sbjct: 106 RKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAH 165

Query: 556 SNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMI 615
           ++ G+  Q      ++         +   ++++ +  R G +D A  + + +  +  V  
Sbjct: 166 ADSGIGRQ----IHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVS- 220

Query: 616 WRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYA 658
           W AL+       + E   ++   +L      EATH   S++++
Sbjct: 221 WNALISGFARKGDGETALMTFAEML--RNGFEATHFTYSSVFS 261



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 16/214 (7%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  ++A+ L++   + D      IH   +K     D++  + LL++Y +   +  AT +F
Sbjct: 151 NGFTFASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVF 210

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D++  +N +S+   I G+        A+  F+ + R G E   F +++    +  +G  E
Sbjct: 211 DKLDSKNGVSWNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALE 270

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF----------- 223
               V A + K      AF G  L+D ++  G +  ARKVFD + +              
Sbjct: 271 QGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFA 330

Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKAC 252
                +EA++ F +MR  G   N  TF  +L AC
Sbjct: 331 QYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTAC 364



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 63/143 (44%), Gaps = 3/143 (2%)

Query: 22  NAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQ 81
           NA + G + +    T   + +      F  + F   +Y++   S  +   L+    +H  
Sbjct: 222 NALISGFARKGDGETALMTFAEMLRNGFEATHF---TYSSVFSSIARLGALEQGKWVHAH 278

Query: 82  VLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEA 141
           ++K    +  FA N LL++Y K   + DA K+FD + +++ +++ T +  +       EA
Sbjct: 279 MIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEA 338

Query: 142 VGLFSTLHREGHELNPFAFTAFL 164
           V  F  + + G  LN   F   L
Sbjct: 339 VSHFEEMRKSGIYLNQVTFLCIL 361


>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 684

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 260/637 (40%), Positives = 367/637 (57%), Gaps = 30/637 (4%)

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNN 242
           V  L H       T+LI      GCV   R          F  AL  F+ MR    +PN+
Sbjct: 64  VLSLTHLRTVVTWTSLIS-----GCVHNRR----------FLPALLHFTNMRRDNVQPND 108

Query: 243 FTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEE 302
           FTF  V KA   +      K  HG ALK     D++V  +  D+Y K+G   +A  +F+E
Sbjct: 109 FTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDE 168

Query: 303 MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG 362
           MP++++  W+  I+   Q   S+DA+  F         PN  TF + L AC  M  L+LG
Sbjct: 169 MPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLG 228

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE-SPKRNHVTWNTMIVGYVQ 421
            Q+H+ +VR G   DV V+N L+D Y KCG + ++  +F     ++N V+W +M+   VQ
Sbjct: 229 RQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQ 288

Query: 422 LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVV 481
             E  +A ++F +  +E  P T+   SSVL ACA L  LE G  VH L VKA  + ++ V
Sbjct: 289 NHEEERACMVFLQARKEVEP-TDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFV 347

Query: 482 ANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQ--QR 539
            +AL+DMY KCGSI +A  VF  + + N V+WNAMI GY+  G     L++F+ M     
Sbjct: 348 GSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSH 407

Query: 540 GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDK 599
           G RP+ +T + +LS CS  G +E+G   F+SM  NYGIEP  EH+  +V LLGR+G +D+
Sbjct: 408 GIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDR 467

Query: 600 AAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAM 659
           A + I+ +  QP++ +W ALLGAC +H   E+G+++A+ + + +  D   HV+LSN+ A 
Sbjct: 468 AYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLAS 527

Query: 660 ARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMK 708
           A  WE+A             K  G SWI  +  +H F+A D+SH   + I+ ML  L   
Sbjct: 528 AGRWEEATVVRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHDRNSEIQAMLGKLRGG 587

Query: 709 SRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDC 768
            ++AGY+PD +  L D+ ++EK   +W HSEK+ALAF L  +P   PIRI KNLRIC DC
Sbjct: 588 MKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPQGVPIRITKNLRICGDC 647

Query: 769 HTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           H+AIK IS+IV REII+RD HRFH F+DGCCSC D+W
Sbjct: 648 HSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKDYW 684



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 177/350 (50%), Gaps = 12/350 (3%)

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
           +++  L+++Y+K   +++A+ +      + V+ W+ +I+        + A+  F  MR+ 
Sbjct: 43  FLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRD 102

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            V PN FTF  V +A A ++    G QIH L ++ G++ DVFV  +  D+Y K G   ++
Sbjct: 103 NVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDA 162

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
             +F E P+RN  TWN  I   VQ      A++ F + L        +T+ + L AC  +
Sbjct: 163 CNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDM 222

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMM-NDWNEVSWNAM 516
             L  G Q+H   V+  Y  DV VAN LID Y KCG I  A +VF+ + N  N VSW +M
Sbjct: 223 VRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSM 282

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           ++    +        VF L  ++   P +     VLSAC+  G LE G +     V    
Sbjct: 283 LAALVQNHEEERACMVF-LQARKEVEPTDFMISSVLSACAELGGLELGRS-----VHALA 336

Query: 577 IEPCIEHY----TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           ++ C+E      +++V + G+ G ++ A ++   +P + +++ W A++G 
Sbjct: 337 VKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELP-ERNLVTWNAMIGG 385



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 173/386 (44%), Gaps = 24/386 (6%)

Query: 74  TAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYT 133
           T   IH   LK G   D+F      ++Y K     DA  +FDEMP+RN  ++   I    
Sbjct: 126 TGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAV 185

Query: 134 VSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAF 193
              + ++A+  F        E N   F AFL   V M    L   + A + + G+  +  
Sbjct: 186 QDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVS 245

Query: 194 VGTALIDAFSVCGCVEFARKVFDGLFND------CF-----------EEALNFFSQMRAV 236
           V   LID +  CG +  A  VF+ + N       C            E A   F Q R  
Sbjct: 246 VANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARK- 304

Query: 237 GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNA 296
             +P +F  + VL AC  L  + + +S H  A+K C E +++V  AL+D+Y K G I NA
Sbjct: 305 EVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENA 364

Query: 297 RRIFEEMPKKDVIPWSFMIARYA-QTDLSIDAVELFCRMRQAF--VAPNQFTFVSVLQAC 353
            ++F E+P+++++ W+ MI  YA Q D+ + A+ LF  M      + P+  T +S+L  C
Sbjct: 365 EQVFSELPERNLVTWNAMIGGYAHQGDIDM-ALRLFEEMTLGSHGIRPSYVTLISILSVC 423

Query: 354 ATMEGLDLGNQI-HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT- 411
           + +  ++ G QI  S+ +  G+         ++D+  + G ++ + E       +  ++ 
Sbjct: 424 SRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISV 483

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLE 437
           W  ++      G+     I   K+ E
Sbjct: 484 WGALLGACRMHGKTELGKIAAEKLFE 509



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 142/312 (45%), Gaps = 5/312 (1%)

Query: 348 SVLQACATMEGLDLGNQIHSLVVRVGLLS-DVFVSNALMDVYAKCGRMENSVELFAESPK 406
           S+L++  +     LG  IH+ ++R  +     F+SN L+++Y+K   + ++  + + +  
Sbjct: 11  SLLESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHL 70

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
           R  VTW ++I G V       A++ F+ M  + V   + T+  V +A A +     G Q+
Sbjct: 71  RTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQI 130

Query: 467 HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLS 526
           H L +K     DV V  +  DMY K G   DA  +FD M   N  +WNA IS       S
Sbjct: 131 HGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRS 190

Query: 527 AEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTS 586
            + +  F         PN++TF   L+AC +   L  G     + +   G +  +     
Sbjct: 191 LDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQ-LHAFIVRCGYKEDVSVANG 249

Query: 587 MVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPED 646
           ++   G+ G +  A  +   I  + +V+ W ++L A ++ N+ E    +    L    E 
Sbjct: 250 LIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAA-LVQNHEE--ERACMVFLQARKEV 306

Query: 647 EATHVLLSNIYA 658
           E T  ++S++ +
Sbjct: 307 EPTDFMISSVLS 318


>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
          Length = 820

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 256/644 (39%), Positives = 384/644 (59%), Gaps = 32/644 (4%)

Query: 193 FVGTALIDAFSVCGCVEFARKVFDGLFNDCFE-------------------EALNFFSQM 233
           F+   LI+ ++ CGC+  A  +F  + +  F+                   +AL+ F+QM
Sbjct: 178 FLFNNLINLYAKCGCLNQALLLFS-ITHHHFKTIVTWTSLITHLSHFNMHLQALSLFNQM 236

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
           R  G  PN FTF+ +L A      +   +  H    K  ++ +++V  AL+D+Y K  ++
Sbjct: 237 RCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADM 296

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR-MRQAFVAPNQFTFVSVLQA 352
            +A R+F++MP+++++ W+ MI  +   +L   AV +F   +R+  V PN+ +  SVL A
Sbjct: 297 HSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSA 356

Query: 353 CATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTW 412
           CA M GL+ G Q+H +VV+ GL+   +V N+LMD+Y KC   +  V+LF     R+ VTW
Sbjct: 357 CANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTW 416

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
           N +++G+VQ  +  +A   F  M  E +   E ++S+VL + ASLAAL  G  +H   +K
Sbjct: 417 NVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIK 476

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
             Y  ++ +  +LI MYAKCGS+ DA  VF+ + D N +SW AMIS Y +HG + +V+++
Sbjct: 477 LGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIEL 536

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
           F+ M   G  P+++TFV VLSACS+ G +E+G A+F SM   + + P  EHY  MV LLG
Sbjct: 537 FEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLG 596

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVL 652
           RAG LD+A + IE +P +P+  +W ALLGAC  + N+++GR +A+ + + EP +   +VL
Sbjct: 597 RAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVL 656

Query: 653 LSNIYAMARSWEKA-----------ASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGM 701
           L+N+   +   E+A             KEPG SWI+ + M   F A D SH+  + I  M
Sbjct: 657 LANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKM 716

Query: 702 LEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKN 761
           LE L    +K GY+ +   V   + E+E+E+ LW HSEKLALAF L  +P  SPIRI KN
Sbjct: 717 LEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLLTLPIDSPIRIKKN 776

Query: 762 LRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           LR C  CHT +K+ SKI  REII+RD++RFH F DG CSCGD+W
Sbjct: 777 LRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 820



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 132/535 (24%), Positives = 247/535 (46%), Gaps = 26/535 (4%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPE--R 120
           L + IQ   L+ A  IH Q++        F  N L+N+Y K   L  A  LF       +
Sbjct: 149 LNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFK 208

Query: 121 NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVF 180
             +++ + I   +  +  ++A+ LF+ +   G   N F F++ L    +         + 
Sbjct: 209 TIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLH 268

Query: 181 ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GLF-NDCFE 224
           + ++K G D+N FVGTAL+D ++ C  +  A +VFD               G F N+ ++
Sbjct: 269 SLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYD 328

Query: 225 EALNFFSQ-MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
            A+  F   +R     PN  + + VL AC  +  +   +  HG  +K       YV  +L
Sbjct: 329 RAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSL 388

Query: 284 LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
           +D+Y K        ++F+ +  +DV+ W+ ++  + Q D   +A   F  MR+  + P++
Sbjct: 389 MDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDE 448

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
            +F +VL + A++  L  G  IH  ++++G + ++ +  +L+ +YAKCG + ++ ++F  
Sbjct: 449 ASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEG 508

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
               N ++W  MI  Y   G   + + +F  ML E +  + VT+  VL AC+    +E G
Sbjct: 509 IEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEG 568

Query: 464 MQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGY 520
           +  H  ++K  +DM+    +   ++D+  + G + +A R +  M        W A++   
Sbjct: 569 L-AHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGAC 627

Query: 521 SMHG-LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
             +G L         L +   + P N  +V + + C+  G LE+     + M  N
Sbjct: 628 RKYGNLKMGREAAERLFEMEPYNPGN--YVLLANMCTRSGRLEEANEVRRLMGVN 680



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 164/357 (45%), Gaps = 30/357 (8%)

Query: 15  LTHQSKINAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQT 74
           +TH S  N  L+ LS     +  +CS     P  F+ S   S S AT +        +  
Sbjct: 217 ITHLSHFNMHLQALSL---FNQMRCSGPY--PNQFTFSSILSASAATMM--------VLH 263

Query: 75  AMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTV 134
              +H  + K G   ++F    L+++Y K   +  A ++FD+MPERN +S+ + I G+  
Sbjct: 264 GQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFH 323

Query: 135 SSQFVEAVGLFSTLHREGHEL-NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAF 193
           ++ +  AVG+F  + RE   + N  + ++ L    +MG       V   V K G     +
Sbjct: 324 NNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTY 383

Query: 194 VGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRAVG 237
           V  +L+D +  C   +   K+F  +                 ND FEEA N+F  MR  G
Sbjct: 384 VMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREG 443

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR 297
             P+  +F+ VL +   L  +    + H   +K  Y  ++ +  +L+ +Y K G + +A 
Sbjct: 444 ILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAY 503

Query: 298 RIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
           ++FE +   +VI W+ MI+ Y     +   +ELF  M    + P+  TFV VL AC+
Sbjct: 504 QVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACS 560



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 143/285 (50%), Gaps = 5/285 (1%)

Query: 349 VLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK-- 406
           +L        L    QIH+ ++     S  F+ N L+++YAKCG +  ++ LF+ +    
Sbjct: 148 LLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHF 207

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
           +  VTW ++I          +A+ +F++M        + T+SS+L A A+   +  G Q+
Sbjct: 208 KTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQL 267

Query: 467 HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLS 526
           H L  K  +D ++ V  AL+DMYAKC  +  A  VFD M + N VSWN+MI G+  + L 
Sbjct: 268 HSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLY 327

Query: 527 AEVLKVF-DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYT 585
              + VF D+++++   PN ++   VLSAC+N G L  G      +V  YG+ P      
Sbjct: 328 DRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQ-VHGVVVKYGLVPLTYVMN 386

Query: 586 SMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
           S++ +  +    D+  KL + +     V+ W  L+   + ++  E
Sbjct: 387 SLMDMYFKCRFFDEGVKLFQCVG-DRDVVTWNVLVMGFVQNDKFE 430



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 78/338 (23%), Positives = 144/338 (42%), Gaps = 29/338 (8%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  S ++ L +C     L     +H  V+K G     +  N L+++Y K     +  KLF
Sbjct: 346 NEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLF 405

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             + +R+ +++   + G+  + +F EA   F  + REG   +  +F+  L    S+    
Sbjct: 406 QCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALH 465

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------- 218
               +   + KLG+  N  +  +LI  ++ CG +  A +VF+G+                
Sbjct: 466 QGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQ 525

Query: 219 FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKS-AHGCALKTCYEMDL 277
            + C  + +  F  M + G +P++ TF  VL AC    T RV +  AH  ++K  ++M+ 
Sbjct: 526 LHGCANQVIELFEHMLSEGIEPSHVTFVCVLSAC--SHTGRVEEGLAHFNSMKKIHDMNP 583

Query: 278 YVA--VALLDLYTKSGEISNARRIFEEMPKKDVIP-WSFMIA---RYAQTDLSIDAVELF 331
                  ++DL  ++G +  A+R  E MP K     W  ++    +Y    +  +A E  
Sbjct: 584 GPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERL 643

Query: 332 CRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
             M       N   +V +   C     L+  N++  L+
Sbjct: 644 FEMEPY----NPGNYVLLANMCTRSGRLEEANEVRRLM 677


>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
          Length = 1539

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 279/762 (36%), Positives = 425/762 (55%), Gaps = 39/762 (5%)

Query: 81   QVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVE 140
            +V K G   DL+  + L++ + +     DA  +F++M  RN +S    + G     Q   
Sbjct: 780  RVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEA 839

Query: 141  AVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE----LCPCVFACVYKLG-HDSNAFVG 195
            A  +F  + ++   +N  ++   L         E        V A V + G +D+   +G
Sbjct: 840  AAKVFHEM-KDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIG 898

Query: 196  TALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRAVGFK 239
              L++ ++  G +  A  VF+ +                 N+C E+A   F +MR  G  
Sbjct: 899  NGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSM 958

Query: 240  PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
            P+NFT    L +C  L  I + +  H   LK   + D+ V+ ALL LY ++G  +   ++
Sbjct: 959  PSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKV 1018

Query: 300  FEEMPKKDVIPWSFMIARYAQTDLSI-DAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
            F  MP+ D + W+ +I   + ++ S+  AV+ F  M +     ++ TF+++L A +++  
Sbjct: 1019 FSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSL 1078

Query: 359  LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE-SPKRNHVTWNTMIV 417
             ++ +QIH+LV++  L  D  + NAL+  Y KCG M    ++FA  S  R+ V+WN+MI 
Sbjct: 1079 HEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMIS 1138

Query: 418  GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM 477
            GY+    + KAM +   M+++       T+++VL ACAS+A LE GM+VH   ++A  + 
Sbjct: 1139 GYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMES 1198

Query: 478  DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQ 537
            DVVV +AL+DMY+KCG I  A   F++M   N  SWN+MISGY+ HG   + LK+F  M 
Sbjct: 1199 DVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMM 1258

Query: 538  QRGWRPNNLT-FVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGH 596
              G  P+++   +GVLSACS+ G +E+G  +FKSM   Y + P +EH++ MV LLGRAG 
Sbjct: 1259 LDGQPPDHVAPLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGK 1318

Query: 597  LDKAAKLIEGIPFQPSVMIWRALLGACIIHN--NVEIGRLSAQHILDFEPEDEATHVLLS 654
            LD+    I  +P +P+V+IWR +LGAC   N  N E+GR +A+ +L+ EP++   +VLL+
Sbjct: 1319 LDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLA 1378

Query: 655  NIYAMARSWEK-----------AASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLE 703
            N+YA    WE            A  KE G SW+  +  VH F AGD  H + + I   L 
Sbjct: 1379 NMYASGEKWEDVAKARXAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDXIYDKLR 1438

Query: 704  WLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLR 763
             LN K R AGYIP     L D+  + KE  L  HSEK+A+AF L +   + PIRI+KNLR
Sbjct: 1439 ELNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAFVLTRQ-SALPIRIMKNLR 1497

Query: 764  ICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            +C DCH+A   ISKIV R+I++RD +RFHHF+DG CSCGD+W
Sbjct: 1498 VCGDCHSAFGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 1539



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 168/588 (28%), Positives = 287/588 (48%), Gaps = 34/588 (5%)

Query: 73   QTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGY 132
            + A  +H Q +K G   +LF +N L+N+YV++  L  A KLFDEM  RN +++   I GY
Sbjct: 561  EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 620

Query: 133  TVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA--ELCPCVFACVYKLGHDS 190
            T + +  EA   F  + R G   N +AF + L+     G +  +L   +   + K  + S
Sbjct: 621  TQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGS 680

Query: 191  NAFVGTALIDAFSVC-GCVEFARKVFD--GLFNDC--------------FEEALNFFSQM 233
            +  V   LI  +  C      AR VFD  G+ N                   A + FS M
Sbjct: 681  DVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSM 740

Query: 234  RAVG----FKPNNFTF-AFVLKACLGLD-TIRVAKSAHGCALKTCYEMDLYVAVALLDLY 287
            +  G    FKPN +TF + +  AC  +D  + V +       K+ +  DLYV  AL+  +
Sbjct: 741  QKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGF 800

Query: 288  TKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFV 347
             + G   +A+ IFE+M  ++V+  + ++    +      A ++F  M+   V  N  ++V
Sbjct: 801  ARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKD-LVGINSDSYV 859

Query: 348  SVLQACATM----EGLDLGNQIHSLVVRVGLLSD-VFVSNALMDVYAKCGRMENSVELFA 402
             +L A +      EG   G ++H+ V+R GL  + V + N L+++YAK G + ++  +F 
Sbjct: 860  VLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFE 919

Query: 403  ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
               +++ V+WN++I G  Q      A   F +M       +  T  S L +CASL  +  
Sbjct: 920  LMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIML 979

Query: 463  GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
            G Q+HC  +K   D DV V+NAL+ +YA+ G  T+   VF +M ++++VSWN++I   S 
Sbjct: 980  GEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSD 1039

Query: 523  HGLS-AEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
               S ++ +K F  M + GW  + +TF+ +LSA S+  L E       ++V  Y +    
Sbjct: 1040 SEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQ-IHALVLKYCLSDDT 1098

Query: 582  EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNV 629
                +++S  G+ G +++  K+   +      + W +++    IHN +
Sbjct: 1099 AIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISG-YIHNEL 1145



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 60/114 (52%)

Query: 446 TYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMM 505
           T+ S++         E   ++H  ++K  +  ++ ++N LI++Y + G +  A+ +FD M
Sbjct: 546 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 605

Query: 506 NDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGG 559
           ++ N V+W  +ISGY+ +G   E    F  M + G+ PN+  F   L AC   G
Sbjct: 606 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 659



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 51/100 (51%)

Query: 54   FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
             +S ++AT L +C     L+  M +H   ++     D+   + L+++Y K  R+  A++ 
Sbjct: 1163 LDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRF 1222

Query: 114  FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGH 153
            F+ MP RN  S+ + I GY       +A+ LF+ +  +G 
Sbjct: 1223 FELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQ 1262


>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Glycine max]
          Length = 634

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 241/587 (41%), Positives = 361/587 (61%), Gaps = 13/587 (2%)

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
            M   G   N   +  VL  CL    IR  +  H   +KT Y   +Y+   L+  Y K  
Sbjct: 48  HMALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCD 107

Query: 292 EISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQ 351
            + +AR +F+ MP+++V+ W+ MI+ Y+Q   +  A+ LF +M ++   PN+FTF +VL 
Sbjct: 108 SLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLT 167

Query: 352 ACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
           +C    G  LG QIHS ++++   + V+V ++L+D+YAK G++  +  +F   P+R+ V+
Sbjct: 168 SCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVS 227

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
              +I GY QLG   +A+ +F ++  E + +  VTY+SVL A + LAAL+ G QVH   +
Sbjct: 228 CTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLL 287

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
           ++     VV+ N+LIDMY+KCG++T AR +FD +++   +SWNAM+ GYS HG   EVL+
Sbjct: 288 RSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLE 347

Query: 532 VFDLM-QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA-NYGIEPCIEHYTSMVS 589
           +F+LM  +   +P+++T + VLS CS+GGL ++G   F  M +    ++P  +HY  +V 
Sbjct: 348 LFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVD 407

Query: 590 LLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEAT 649
           +LGRAG ++ A + ++ +PF+PS  IW  LLGAC +H+N++IG      +L  EPE+   
Sbjct: 408 MLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVGHQLLQIEPENAGN 467

Query: 650 HVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNII 698
           +V+LSN+YA A  WE           KA +KEPG SWIE   ++H F A D SH     +
Sbjct: 468 YVILSNLYASAGRWEDVRSLRNLMLKKAVTKEPGRSWIELDQVLHTFHASDCSHPRREEV 527

Query: 699 RGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRI 758
              ++ L+ + ++AGY+PDLS VL DV E++KE+ L  HSEKLAL F L   P S PIR+
Sbjct: 528 SAKVQELSARFKEAGYVPDLSCVLHDVDEEQKEKILLSHSEKLALTFGLIATPESVPIRV 587

Query: 759 IKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           IKNLRICVDCH   K  SKI  RE+ +RD +RFH    G CSCGD+W
Sbjct: 588 IKNLRICVDCHNFAKYTSKIYGREVSLRDKNRFHRIVGGKCSCGDYW 634



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 108/351 (30%), Positives = 182/351 (51%), Gaps = 20/351 (5%)

Query: 193 FVGTALIDAFSVCGCVEFARKVFDGLFNDCF----------------EEALNFFSQMRAV 236
           ++ T LI  +  C  +  AR VFD +                      +AL+ F QM   
Sbjct: 94  YLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRS 153

Query: 237 GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNA 296
           G +PN FTFA VL +C+G     + +  H   +K  YE  +YV  +LLD+Y K G+I  A
Sbjct: 154 GTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEA 213

Query: 297 RRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM 356
           R IF+ +P++DV+  + +I+ YAQ  L  +A+ELF R+++  +  N  T+ SVL A + +
Sbjct: 214 RGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGL 273

Query: 357 EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMI 416
             LD G Q+H+ ++R  + S V + N+L+D+Y+KCG +  +  +F    +R  ++WN M+
Sbjct: 274 AALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAML 333

Query: 417 VGYVQLGEVGKAMIMFSKMLEE-QVPATEVTYSSVLRACASLAALEPGMQV--HCLTVKA 473
           VGY + GE  + + +F+ M++E +V    VT  +VL  C+     + GM +     + K 
Sbjct: 334 VGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKI 393

Query: 474 NYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
           +   D      ++DM  + G +  A   V  M  + +   W  ++   S+H
Sbjct: 394 SVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVH 444



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 180/374 (48%), Gaps = 27/374 (7%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N   Y T L  C++   ++    +H  ++K      ++    L+  YVK + L DA  +F
Sbjct: 57  NFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVF 116

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D MPERN +S+   I  Y+      +A+ LF  + R G E N F F   L   +      
Sbjct: 117 DVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFV 176

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN----DCF------- 223
           L   + + + KL ++++ +VG++L+D ++  G +  AR +F  L       C        
Sbjct: 177 LGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYA 236

Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                EEAL  F +++  G + N  T+  VL A  GL  +   K  H   L++  E+  Y
Sbjct: 237 QLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRS--EVPSY 294

Query: 279 VAV--ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM-R 335
           V +  +L+D+Y+K G ++ ARRIF+ + ++ VI W+ M+  Y++     + +ELF  M  
Sbjct: 295 VVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMID 354

Query: 336 QAFVAPNQFTFVSVLQACA----TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC 391
           +  V P+  T ++VL  C+      +G+D+   + S   ++ +  D      ++D+  + 
Sbjct: 355 ENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTS--GKISVQPDSKHYGCVVDMLGRA 412

Query: 392 GRMENSVELFAESP 405
           GR+E + E   + P
Sbjct: 413 GRVEAAFEFVKKMP 426



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 123/303 (40%), Gaps = 37/303 (12%)

Query: 26  RGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKK 85
           RG ++QA     Q   S T P        N  ++AT L SCI +        IH  ++K 
Sbjct: 137 RGYASQALSLFVQMLRSGTEP--------NEFTFATVLTSCIGSSGFVLGRQIHSHIIKL 188

Query: 86  GNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLF 145
                ++  + LL++Y K  ++ +A  +F  +PER+ +S    I GY       EA+ LF
Sbjct: 189 NYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELF 248

Query: 146 STLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVC 205
             L REG + N   +T+ L  L  +   +    V   + +    S   +  +LID +S C
Sbjct: 249 RRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKC 308

Query: 206 GCVEFARKVFDGLFNDCF----------------EEALNFFSQM-RAVGFKPNNFTFAFV 248
           G + +AR++FD L                      E L  F+ M      KP++ T   V
Sbjct: 309 GNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAV 368

Query: 249 LKAC-------LGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
           L  C        G+D      S      K   + D      ++D+  ++G +  A    +
Sbjct: 369 LSGCSHGGLEDKGMDIFYDMTSG-----KISVQPDSKHYGCVVDMLGRAGRVEAAFEFVK 423

Query: 302 EMP 304
           +MP
Sbjct: 424 KMP 426


>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Glycine max]
          Length = 975

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 271/777 (34%), Positives = 410/777 (52%), Gaps = 39/777 (5%)

Query: 64  QSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTI 123
           ++C    D++    +H   LK G   D F  N L+ +Y K   +  A K+F+ M  RN +
Sbjct: 203 KACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLV 262

Query: 124 SFVTTIQGYTVSSQFVEAVGLFSTL---HREGHELNPFAFTAFLKVLVSMGWAELCPCVF 180
           S+ + +   + +  F E  G+F  L     EG   +       +    ++G   +   V 
Sbjct: 263 SWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVH 322

Query: 181 ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--------------------GLFN 220
              +KLG      V  +L+D +S CG +  AR +FD                    G F 
Sbjct: 323 GLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFR 382

Query: 221 DCFEEALNFFSQM-RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
             FE       +M R    + N  T   VL AC G   +   K  HG A +  +  D  V
Sbjct: 383 GVFE----LLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELV 438

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
           A A +  Y K   +  A R+F  M  K V  W+ +I  +AQ      +++LF  M  + +
Sbjct: 439 ANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGM 498

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
            P++FT  S+L ACA ++ L  G +IH  ++R GL  D F+  +LM +Y +C  M     
Sbjct: 499 DPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKL 558

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +F +   ++ V WN MI G+ Q     +A+  F +ML   +   E+  + VL AC+ ++A
Sbjct: 559 IFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSA 618

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
           L  G +VH   +KA+   D  V  ALIDMYAKCG +  ++ +FD +N+ +E  WN +I+G
Sbjct: 619 LRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAG 678

Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
           Y +HG   + +++F+LMQ +G RP++ TF+GVL AC++ GL+ +G  Y   M   YG++P
Sbjct: 679 YGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKP 738

Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHI 639
            +EHY  +V +LGRAG L +A KL+  +P +P   IW +LL +C  + ++EIG   ++ +
Sbjct: 739 KLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKL 798

Query: 640 LDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAG 688
           L+ EP     +VLLSN+YA    W           E    K+ G SWIE  GMV+ F   
Sbjct: 799 LELEPNKAENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEIGGMVYRFLVS 858

Query: 689 DTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALF 748
           D S ++   I+     L  K  K GY PD S VL ++ E+ K + L  HSEKLA++F L 
Sbjct: 859 DGSLSESKKIQQTWIKLEKKISKIGYKPDTSCVLHELEEEGKIKILKSHSEKLAISFGLL 918

Query: 749 KMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
                + +R+ KNLRICVDCH AIK++SK+V+R+II+RD  RFHHF++G C+CGDFW
Sbjct: 919 NTAKGTTLRVCKNLRICVDCHNAIKLVSKVVKRDIIVRDNKRFHHFKNGLCTCGDFW 975



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 158/608 (25%), Positives = 276/608 (45%), Gaps = 34/608 (5%)

Query: 48  TFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCL-DLFATNVLLNVYVKLNR 106
           T S S+ +  +    L++C  + ++     +H  V        D+  +  ++ +Y     
Sbjct: 84  TVSSSDISKEAIGILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGS 143

Query: 107 LPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFT--AFL 164
             D+  +FD   E++   +   + GY+ ++ F +A+ LF  L     +L P  FT     
Sbjct: 144 PSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLEL-LSATDLAPDNFTLPCVA 202

Query: 165 KVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----- 219
           K    +   EL   V A   K G  S+AFVG ALI  +  CG VE A KVF+ +      
Sbjct: 203 KACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLV 262

Query: 220 -----------NDCFEEALNFFSQM---RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAH 265
                      N  F E    F ++      G  P+  T   V+ AC  +  +R+    H
Sbjct: 263 SWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVH 322

Query: 266 GCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSI 325
           G A K     ++ V  +L+D+Y+K G +  AR +F+    K+V+ W+ +I  Y++     
Sbjct: 323 GLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFR 382

Query: 326 DAVELFCRM-RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNAL 384
              EL   M R+  V  N+ T ++VL AC+    L    +IH    R G L D  V+NA 
Sbjct: 383 GVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAF 442

Query: 385 MDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATE 444
           +  YAKC  ++ +  +F     +   +WN +I  + Q G  GK++ +F  M++  +    
Sbjct: 443 VAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDR 502

Query: 445 VTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDM 504
            T  S+L ACA L  L  G ++H   ++   ++D  +  +L+ +Y +C S+   +L+FD 
Sbjct: 503 FTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDK 562

Query: 505 MNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG 564
           M + + V WN MI+G+S + L  E L  F  M   G +P  +   GVL ACS    L  G
Sbjct: 563 MENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLG 622

Query: 565 EAY----FKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
           +       K+ ++      C     +++ +  + G ++++  + + +  +    +W  ++
Sbjct: 623 KEVHSFALKAHLSEDAFVTC-----ALIDMYAKCGCMEQSQNIFDRVN-EKDEAVWNVII 676

Query: 621 GACIIHNN 628
               IH +
Sbjct: 677 AGYGIHGH 684



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 126/488 (25%), Positives = 225/488 (46%), Gaps = 29/488 (5%)

Query: 61  TSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPER 120
           T + +C    +++  M +H    K G   ++   N L+++Y K   L +A  LFD    +
Sbjct: 304 TVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGK 363

Query: 121 NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC-- 178
           N +S+ T I GY+    F     L   + RE  ++     T    +    G  +L     
Sbjct: 364 NVVSWNTIIWGYSKEGDFRGVFELLQEMQRE-EKVRVNEVTVLNVLPACSGEHQLLSLKE 422

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFE-------------- 224
           +    ++ G   +  V  A + A++ C  ++ A +VF G+                    
Sbjct: 423 IHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGF 482

Query: 225 --EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
             ++L+ F  M   G  P+ FT   +L AC  L  +R  K  HG  L+   E+D ++ ++
Sbjct: 483 PGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGIS 542

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+ LY +   +   + IF++M  K ++ W+ MI  ++Q +L  +A++ F +M    + P 
Sbjct: 543 LMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQ 602

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           +     VL AC+ +  L LG ++HS  ++  L  D FV+ AL+D+YAKCG ME S  +F 
Sbjct: 603 EIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFD 662

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
              +++   WN +I GY   G   KA+ +F  M  +       T+  VL AC     +  
Sbjct: 663 RVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTE 722

Query: 463 GMQV-----HCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAM 516
           G++      +   VK   +    V    +DM  + G +T+A +LV +M ++ +   W+++
Sbjct: 723 GLKYLGQMQNLYGVKPKLEHYACV----VDMLGRAGQLTEALKLVNEMPDEPDSGIWSSL 778

Query: 517 ISGYSMHG 524
           +S    +G
Sbjct: 779 LSSCRNYG 786


>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 734

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 268/698 (38%), Positives = 391/698 (56%), Gaps = 29/698 (4%)

Query: 136 SQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVG 195
           S    A+  F  +   G       FT+ LK+  + G       V A +   G DS A   
Sbjct: 38  SDLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAA 97

Query: 196 TALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAV-GF 238
           TAL + ++ C     AR+VFD +                 N     A+    +M+   G 
Sbjct: 98  TALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGE 157

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
           +P++ T   VL AC     +   + AH  A+++  E  + VA A+LD Y K G+I  AR 
Sbjct: 158 RPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARV 217

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           +F+ MP K+ + W+ MI  YAQ   S +A+ LF RM +  V     + ++ LQAC  +  
Sbjct: 218 VFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGC 277

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           LD G ++H L+VR+GL S+V V NAL+ +Y+KC R++ +  +F E  +R  V+WN MI+G
Sbjct: 278 LDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILG 337

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
             Q G    A+ +F++M  E V     T  SV+ A A ++       +H  +++ + D D
Sbjct: 338 CAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQD 397

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
           V V  ALIDMYAKCG +  AR++F+   + + ++WNAMI GY  HG     +++F+ M+ 
Sbjct: 398 VYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKS 457

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLD 598
            G  PN  TF+ VLSACS+ GL+++G  YF SM  +YG+EP +EHY +MV LLGRAG LD
Sbjct: 458 IGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLD 517

Query: 599 KAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYA 658
           +A   I+ +P  P + ++ A+LGAC +H NVE+   SAQ I +  P++   HVLL+NIYA
Sbjct: 518 EAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYA 577

Query: 659 MARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNM 707
            A  W+  A            K PG S I+ +  +H F +G T+H     I   L  L  
Sbjct: 578 NASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIE 637

Query: 708 KSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVD 767
           + +  GY+PD  ++  DV +D K + L  HSEKLA+AF L +  P + I+I KNLR+C D
Sbjct: 638 EIKAVGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCND 696

Query: 768 CHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           CH A K+IS +  REII+RD+ RFHHF+DG CSCGD+W
Sbjct: 697 CHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 139/507 (27%), Positives = 236/507 (46%), Gaps = 25/507 (4%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           ++ + L+ C    DL T   +H Q+  +G   +  A   L N+Y K  R  DA ++FD M
Sbjct: 61  TFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRM 120

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLH-REGHELNPFAFTAFLKVLVSMGWAELC 176
           P R+ +++   + GY  +     A+ +   +   EG   +     + L    +      C
Sbjct: 121 PVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAAC 180

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FN 220
               A   + G +    V TA++DA+  CG +  AR VFD +                 N
Sbjct: 181 REAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQN 240

Query: 221 DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
               EAL  F++M   G    + +    L+AC  L  +      H   ++   + ++ V 
Sbjct: 241 GDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVM 300

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
            AL+ +Y+K   +  A  +F+E+ ++  + W+ MI   AQ   S DAV LF RM+   V 
Sbjct: 301 NALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVK 360

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           P+ FT VSV+ A A +        IH   +R+ L  DV+V  AL+D+YAKCGR+  +  L
Sbjct: 361 PDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARIL 420

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F  + +R+ +TWN MI GY   G    A+ +F +M    +   E T+ SVL AC+    +
Sbjct: 421 FNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLV 480

Query: 461 EPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMI 517
           + G + +  ++K +Y ++  + +   ++D+  + G + +A   +  M  D     + AM+
Sbjct: 481 DEGRE-YFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAML 539

Query: 518 SGYSMHG---LSAE-VLKVFDLMQQRG 540
               +H    L+ E   K+F+L  Q G
Sbjct: 540 GACKLHKNVELAEESAQKIFELGPQEG 566


>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g18750, chloroplastic; Flags: Precursor
 gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
 gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
 gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 265/781 (33%), Positives = 416/781 (53%), Gaps = 28/781 (3%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           + +  +  + LQ C  +  L+    +   +   G  +D    + L  +Y     L +A++
Sbjct: 91  DIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASR 150

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +FDE+     + +   +     S  F  ++GLF  +   G E++ + F+   K   S+  
Sbjct: 151 VFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRS 210

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------------- 219
                 +   + K G      VG +L+  +     V+ ARKVFD +              
Sbjct: 211 VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 270

Query: 220 ---NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
              N   E+ L+ F QM   G + +  T   V   C     I + ++ H   +K C+  +
Sbjct: 271 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 330

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
                 LLD+Y+K G++ +A+ +F EM  + V+ ++ MIA YA+  L+ +AV+LF  M +
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             ++P+ +T  +VL  CA    LD G ++H  +    L  D+FVSNALMD+YAKCG M+ 
Sbjct: 391 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQE 450

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ-VPATEVTYSSVLRACA 455
           +  +F+E   ++ ++WNT+I GY +     +A+ +F+ +LEE+     E T + VL ACA
Sbjct: 451 AELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACA 510

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
           SL+A + G ++H   ++  Y  D  VAN+L+DMYAKCG++  A ++FD +   + VSW  
Sbjct: 511 SLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTV 570

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           MI+GY MHG   E + +F+ M+Q G   + ++FV +L ACS+ GL+++G  +F  M    
Sbjct: 571 MIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHEC 630

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS 635
            IEP +EHY  +V +L R G L KA + IE +P  P   IW ALL  C IH++V++    
Sbjct: 631 KIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKV 690

Query: 636 AQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHY 684
           A+ + + EPE+   +VL++NIYA A  WE           +   K PG SWIE +G V+ 
Sbjct: 691 AEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNI 750

Query: 685 FRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALA 744
           F AGD+S+ +   I   L  +  +  + GY P     L D  E EKE  L  HSEKLA+A
Sbjct: 751 FVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMA 810

Query: 745 FALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
             +        IR+ KNLR+C DCH   K +SK+ +REI++RD +RFH F+DG CSC  F
Sbjct: 811 LGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGF 870

Query: 805 W 805
           W
Sbjct: 871 W 871


>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
          Length = 783

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 251/645 (38%), Positives = 374/645 (57%), Gaps = 30/645 (4%)

Query: 191 NAFV-GTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQM 233
           N FV  T +I  +S+CG    +R VFD L                 N+ FE+A++ FS++
Sbjct: 139 NDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSEL 198

Query: 234 RAVG-FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
            +V   KP+NFT   V+KAC GL  + + +  HG A K     D++V  AL+ +Y K G 
Sbjct: 199 ISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGL 258

Query: 293 ISNA-RRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQ 351
           +  A +R+F+ M  K V  W+ ++  YAQ      A++L+ +M  + + P+ FT  S+L 
Sbjct: 259 VEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLL 318

Query: 352 ACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
           AC+ M+ L  G +IH   +R GL  D F+  +L+ +Y  CG+   +  LF     R+ V+
Sbjct: 319 ACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVS 378

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
           WN MI GY Q G   +A+ +F +ML + +   E+    V  AC+ L+AL  G ++HC  +
Sbjct: 379 WNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFAL 438

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
           KA+   D+ V++++IDMYAK G I  ++ +FD + + +  SWN +I+GY +HG   E L+
Sbjct: 439 KAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALE 498

Query: 532 VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLL 591
           +F+ M + G +P++ TF G+L ACS+ GL+E G  YF  M+  + IEP +EHYT +V +L
Sbjct: 499 LFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDML 558

Query: 592 GRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHV 651
           GRAG +D A +LIE +P  P   IW +LL +C IH N+ +G   A  +L+ EPE    +V
Sbjct: 559 GRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYV 618

Query: 652 LLSNIYAMARSWEK-----------AASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRG 700
           L+SN++A +  W+               K+ G SWIE  G VH F  GD    ++  +R 
Sbjct: 619 LISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRE 678

Query: 701 MLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIK 760
               L +K    GY PD  +VL D+ E++K   L  HSEKLA++F L       P+R+ K
Sbjct: 679 TWRRLEVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYK 738

Query: 761 NLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           NLRIC DCH A K ISK+V R+I++RD  RFHHF+DG CSCGD+W
Sbjct: 739 NLRICGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 783



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 138/524 (26%), Positives = 248/524 (47%), Gaps = 22/524 (4%)

Query: 56  SHSYATSLQSCIQNDDLQTAMTIHCQVLKKGN-CLDLFATNVLLNVYVKLNRLPDATKLF 114
           S +    LQ+C Q  D++    +H  V      C D      ++ +Y       D+  +F
Sbjct: 105 SEAMGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVF 164

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTL-HREGHELNPFAFTAFLKVLVSMGWA 173
           D++  +N   +   +  YT +  F +A+ +FS L     H+ + F     +K    +   
Sbjct: 165 DKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDL 224

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFA-RKVFDGL-------------- 218
            L   +     K+   S+ FVG ALI  +  CG VE A ++VFD +              
Sbjct: 225 GLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCG 284

Query: 219 --FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
              N    +AL+ + QM   G  P+ FT   +L AC  + ++   +  HG AL+    +D
Sbjct: 285 YAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVD 344

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
            ++ ++LL LY   G+   A+ +F+ M  + ++ W+ MIA Y+Q  L  +A+ LF +M  
Sbjct: 345 PFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLS 404

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             + P +   + V  AC+ +  L LG ++H   ++  L  D+FVS++++D+YAK G +  
Sbjct: 405 DGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGL 464

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           S  +F    +++  +WN +I GY   G   +A+ +F KML   +   + T++ +L AC+ 
Sbjct: 465 SQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSH 524

Query: 457 LAALEPGMQVHCLTVKA-NYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWN 514
              +E G++     +   N +  +     ++DM  + G I DA RL+ +M  D +   W+
Sbjct: 525 AGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWS 584

Query: 515 AMISGYSMHGLSAEVLKVFD-LMQQRGWRPNNLTFVGVLSACSN 557
           +++S   +HG      KV + L++    +P N   +  L A S 
Sbjct: 585 SLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSG 628


>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 268/757 (35%), Positives = 395/757 (52%), Gaps = 63/757 (8%)

Query: 97  LLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELN 156
           +L++++K  R+  A + F+E+  ++   +   + GYT   +F +A+   S +   G + +
Sbjct: 231 ILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPD 290

Query: 157 PFAFTAFLKVLVSMGWAELCPCVFACVYKLGH-DSNAFVGTALIDAFSVCGCVEFARKVF 215
              + A +      G  E     F  +  L     N    TALI      G  +F     
Sbjct: 291 QVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNG-YDF----- 344

Query: 216 DGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC-YE 274
                    EAL+ F +M   G KPN+ T A  + AC  L  +R  +  HG  +K    +
Sbjct: 345 ---------EALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELD 395

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVEL---- 330
            DL V  +L+D Y K   +  ARR F  + + D++ W+ M+A YA      +A+EL    
Sbjct: 396 SDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEM 455

Query: 331 -------------------------------FCRMRQAFVAPNQFTFVSVLQACATMEGL 359
                                          F RM    + PN  T    L AC  +  L
Sbjct: 456 KFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNL 515

Query: 360 DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGY 419
            LG +IH  V+R  +     V +AL+ +Y+ C  +E +  +F+E   R+ V WN++I   
Sbjct: 516 KLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISAC 575

Query: 420 VQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDV 479
            Q G    A+ +  +M    V    VT  S L AC+ LAAL  G ++H   ++   D   
Sbjct: 576 AQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCN 635

Query: 480 VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
            + N+LIDMY +CGSI  +R +FD+M   + VSWN MIS Y MHG   + + +F   +  
Sbjct: 636 FILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTM 695

Query: 540 GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDK 599
           G +PN++TF  +LSACS+ GL+E+G  YFK M   Y ++P +E Y  MV LL RAG  ++
Sbjct: 696 GLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNE 755

Query: 600 AAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAM 659
             + IE +PF+P+  +W +LLGAC IH N ++   +A+++ + EP+    +VL++NIY+ 
Sbjct: 756 TLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSA 815

Query: 660 ARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMK 708
           A  WE AA           +K PG SWIE +  +H F  GDTSH  M  I   +E L   
Sbjct: 816 AGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFD 875

Query: 709 SRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDC 768
            ++ GY+PD + VL+DV EDEKE  L  HSEK+ALAF L      +P+RIIKNLR+C DC
Sbjct: 876 IKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVCGDC 935

Query: 769 HTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           H+A K ISK+ +R+II+RD +RFHHF DG CSCGD+W
Sbjct: 936 HSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 972



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 157/625 (25%), Positives = 270/625 (43%), Gaps = 94/625 (15%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           YA+ LQ C +  +L+    +H Q++  G  +  F  + LL VY +   + DA ++FD+M 
Sbjct: 92  YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
           ERN  S+   ++ Y     + E + LF  +  EG   + F F    K    +    +   
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 211

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-FNDC--------------- 222
           V+  +  +G + N+ V  +++D F  CG ++ AR+ F+ + F D                
Sbjct: 212 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 271

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
           F++AL   S M+  G KP+  T+                                    A
Sbjct: 272 FKKALKCISDMKLSGVKPDQVTWN-----------------------------------A 296

Query: 283 LLDLYTKSGEISNARRIFEEMP-----KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
           ++  Y +SG+   A + F EM      K +V+ W+ +IA   Q     +A+ +F +M   
Sbjct: 297 IISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLE 356

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLL-SDVFVSNALMDVYAKC----- 391
            V PN  T  S + AC  +  L  G +IH   ++V  L SD+ V N+L+D YAKC     
Sbjct: 357 GVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEV 416

Query: 392 --------------------------GRMENSVELFAESP----KRNHVTWNTMIVGYVQ 421
                                     G  E ++EL +E      + + +TWN ++ G+ Q
Sbjct: 417 ARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQ 476

Query: 422 LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVV 481
            G+   A+  F +M    +     T S  L AC  +  L+ G ++H   ++ + ++   V
Sbjct: 477 YGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGV 536

Query: 482 ANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW 541
            +ALI MY+ C S+  A  VF  ++  + V WN++IS  +  G S   L +   M     
Sbjct: 537 GSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNV 596

Query: 542 RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAA 601
             N +T V  L ACS    L QG+      +   G++ C     S++ + GR G + K+ 
Sbjct: 597 EVNTVTMVSALPACSKLAALRQGKE-IHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSR 655

Query: 602 KLIEGIPFQPSVMIWRALLGACIIH 626
           ++ + +P Q  ++ W  ++    +H
Sbjct: 656 RIFDLMP-QRDLVSWNVMISVYGMH 679



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/331 (25%), Positives = 161/331 (48%), Gaps = 9/331 (2%)

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           + S+LQ C  +  L LG Q+H+ +V  G+    F+ + L++VY + G +E++  +F +  
Sbjct: 92  YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
           +RN  +W  ++  Y  LG+  + + +F  M+ E V      +  V +AC+ L     G  
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 211

Query: 466 VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGL 525
           V+   +   ++ +  V  +++DM+ KCG +  AR  F+ +   +   WN M+SGY+  G 
Sbjct: 212 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 271

Query: 526 SAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYT 585
             + LK    M+  G +P+ +T+  ++S  +  G  E+   YF  M      +P +  +T
Sbjct: 272 FKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWT 331

Query: 586 SMVSLLGRAGHLDKAAK-----LIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHIL 640
           ++++   + G+  +A       ++EG+  +P+ +   + + AC   + +  GR    + +
Sbjct: 332 ALIAGSEQNGYDFEALSVFRKMVLEGV--KPNSITIASAVSACTNLSLLRHGREIHGYCI 389

Query: 641 DFEPEDEATHV--LLSNIYAMARSWEKAASK 669
             E  D    V   L + YA  RS E A  K
Sbjct: 390 KVEELDSDLLVGNSLVDYYAKCRSVEVARRK 420



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 117/268 (43%), Gaps = 19/268 (7%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N+ + + +L +C Q  +L+    IH  VL+    L     + L+++Y   + L  A  +F
Sbjct: 498 NTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVF 557

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
            E+  R+ + + + I     S + V A+ L   ++    E+N     + L     +    
Sbjct: 558 SELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALR 617

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------- 218
               +   + + G D+  F+  +LID +  CG ++ +R++FD +                
Sbjct: 618 QGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYG 677

Query: 219 FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            +    +A+N F Q R +G KPN+ TF  +L AC     I          +KT Y MD  
Sbjct: 678 MHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFK-MMKTEYAMDPA 736

Query: 279 VA--VALLDLYTKSGEISNARRIFEEMP 304
           V     ++DL +++G+ +      E+MP
Sbjct: 737 VEQYACMVDLLSRAGQFNETLEFIEKMP 764



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 5/131 (3%)

Query: 47  ITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNR 106
           +  S  E N+ +  ++L +C +   L+    IH  +++ G     F  N L+++Y +   
Sbjct: 591 MNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGS 650

Query: 107 LPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV 166
           +  + ++FD MP+R+ +S+   I  Y +    ++AV LF      G + N   FT  L  
Sbjct: 651 IQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSA 710

Query: 167 -----LVSMGW 172
                L+  GW
Sbjct: 711 CSHSGLIEEGW 721


>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 285/805 (35%), Positives = 417/805 (51%), Gaps = 78/805 (9%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP--ERNTISFVTTIQGYTVS 135
           IH ++L  G  L L  T+ L++ Y+ L  L  A  L    P  +     + + I+ Y  +
Sbjct: 47  IHQKLLSFG-ILTLNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNN 105

Query: 136 SQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVG 195
            +  + +  F  +H      + + F    K    +          A     G  SN FVG
Sbjct: 106 GRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVG 165

Query: 196 TALIDAFSVCGCVEFARKVFDGL-------FNDCFEE---------ALNFFSQM-RAVGF 238
            AL+  +S CG +  ARKVFD +       +N   E          AL  FS+M    GF
Sbjct: 166 NALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGF 225

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
           +P++ T   VL  C  + T  + K  HG A+ +    +++V   L+D+Y K G +  A  
Sbjct: 226 RPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANT 285

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELF--------------------------- 331
           +F  MP KDV+ W+ M+A Y+Q     DAV LF                           
Sbjct: 286 VFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGL 345

Query: 332 -------CR-MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV-------GLLS 376
                  CR M  + + PN+ T +SVL  CA++  L  G +IH   ++        G   
Sbjct: 346 GYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGD 405

Query: 377 DVFVSNALMDVYAKCGRMENSVELFAE-SPK-RNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
           +  V N L+D+YAKC +++ +  +F   SPK R+ VTW  MI GY Q G+  KA+ + S+
Sbjct: 406 ENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSE 465

Query: 435 MLEE--QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD-MDVVVANALIDMYAK 491
           M EE  Q      T S  L ACASLAAL  G Q+H   ++   + + + V+N LIDMYAK
Sbjct: 466 MFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAK 525

Query: 492 CGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGV 551
           CG I DARLVFD M + NEV+W ++++GY MHG   E L +F+ M++ G++ + +T + V
Sbjct: 526 CGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVV 585

Query: 552 LSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQP 611
           L ACS+ G+++QG  YF  M  ++G+ P  EHY  +V LLGRAG L+ A +LIE +P +P
Sbjct: 586 LYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEP 645

Query: 612 SVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE------- 664
             ++W ALL  C IH  VE+G  +A+ I +    ++ ++ LLSN+YA A  W+       
Sbjct: 646 PPVVWVALLSCCRIHGKVELGEYAAKKITELASNNDGSYTLLSNMYANAGRWKDVTRIRS 705

Query: 665 ----KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSA 720
               K   K PG SW+E       F  GD +H     I  +L     + +  GY+P+   
Sbjct: 706 LMRHKGIKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLSDHMQRIKDIGYVPETGF 765

Query: 721 VLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQ 780
            L DV ++EK+  L+ HSEKLALA+ +   P  + IRI KNLR+C DCHTA   +S+I+ 
Sbjct: 766 ALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIID 825

Query: 781 REIIIRDVHRFHHFQDGCCSCGDFW 805
            EII+RD  RFHHF++G CSC  +W
Sbjct: 826 HEIILRDSSRFHHFKNGLCSCKGYW 850



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 147/549 (26%), Positives = 239/549 (43%), Gaps = 92/549 (16%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +++++    ++C +   ++   + H      G   ++F  N L+ +Y +   L DA K+F
Sbjct: 126 DNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVF 185

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           DEMP  + +S+ + I+ Y    +   A+ +FS +       N F F      LV++    
Sbjct: 186 DEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKM------TNEFGFRPDDITLVNV---- 235

Query: 175 LCPCVFACVYKLGHD-----------SNAFVGTALIDAFSVCGCVEFARKVFD------- 216
           L PC       LG              N FVG  L+D ++  G ++ A  VF        
Sbjct: 236 LPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDV 295

Query: 217 -------------GLFNDC---FE----------------------------EALNFFSQ 232
                        G F D    FE                            EAL    Q
Sbjct: 296 VSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQ 355

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL---------YVAVAL 283
           M + G KPN  T   VL  C  +  +   K  H  A+K  Y MDL          V   L
Sbjct: 356 MLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIK--YPMDLRKNGHGDENMVINQL 413

Query: 284 LDLYTKSGEISNARRIFEEM-PK-KDVIPWSFMIARYAQTDLSIDAVELFCRM--RQAFV 339
           +D+Y K  ++  AR +F+ + PK +DV+ W+ MI  Y+Q   +  A+EL   M       
Sbjct: 414 IDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQT 473

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLS-DVFVSNALMDVYAKCGRMENSV 398
            PN FT    L ACA++  L +G QIH+  +R    +  +FVSN L+D+YAKCG + ++ 
Sbjct: 474 RPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDAR 533

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            +F    ++N VTW +++ GY   G   +A+ +F +M         VT   VL AC+   
Sbjct: 534 LVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSG 593

Query: 459 ALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNA 515
            ++ GM+ +   +K ++ +     +   L+D+  + G +  A RL+ +M  +   V W A
Sbjct: 594 MIDQGME-YFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVA 652

Query: 516 MISGYSMHG 524
           ++S   +HG
Sbjct: 653 LLSCCRIHG 661


>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 697

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 229/568 (40%), Positives = 353/568 (62%), Gaps = 12/568 (2%)

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
           ++ AC    ++  A++ H     + +   +++  +L+ LY K G +++ARR+F+ MP +D
Sbjct: 70  LITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARD 129

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
           +  W+ +IA YAQ D+  +A+ L   M +    PN FTF S+L+A        +G QIH+
Sbjct: 130 MCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHA 189

Query: 368 LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK 427
           L V+     DV+V +AL+D+YA+CGRM+ ++ +F +   +N V+WN +I G+ + G+   
Sbjct: 190 LTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGET 249

Query: 428 AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALID 487
            ++MF++M      AT  TYSSV  A A + ALE G  VH   +K+   +   V N ++D
Sbjct: 250 TLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILD 309

Query: 488 MYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLT 547
           MYAK GS+ DAR VFD ++  + V+WN+M++ ++ +GL  E +  F+ M++ G   N +T
Sbjct: 310 MYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQIT 369

Query: 548 FVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGI 607
           F+ +L+ACS+GGL+++G+ YF  M+  Y +EP I+HY ++V LLGRAG L+ A   I  +
Sbjct: 370 FLSILTACSHGGLVKEGKQYF-DMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKM 428

Query: 608 PFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA 667
           P +P+  +W ALLG+C +H N +IG+ +A H+ + +P+D    VLL NIYA    W+ AA
Sbjct: 429 PMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAA 488

Query: 668 -----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIP 716
                       KEP  SW+E +  VH F A D +H     I    E ++++ RKAGY+P
Sbjct: 489 RVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVP 548

Query: 717 DLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIIS 776
           +   VL  V E E++  L  HSEK+ALAFAL  MP  + IRI+KN+RIC DCH+A + IS
Sbjct: 549 NTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYIS 608

Query: 777 KIVQREIIIRDVHRFHHFQDGCCSCGDF 804
           K+ +REI++RD +RFHHF  G CSCGD+
Sbjct: 609 KVFKREIVVRDTNRFHHFSSGSCSCGDY 636



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 175/351 (49%), Gaps = 17/351 (4%)

Query: 190 SNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQM 233
            + F+  +LI  +  CG V  AR+VFDG+                 ND  +EAL     M
Sbjct: 97  GSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGM 156

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
               FKPN FTFA +LKA     +  + +  H   +K  +  D+YV  ALLD+Y + G +
Sbjct: 157 LRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRM 216

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
             A  +F+++  K+ + W+ +IA +A+       + +F  M++       FT+ SV  A 
Sbjct: 217 DMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAI 276

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
           A +  L+ G  +H+ +++ G     FV N ++D+YAK G M ++ ++F    K++ VTWN
Sbjct: 277 AGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWN 336

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
           +M+  + Q G   +A+  F +M +  V   ++T+ S+L AC+    ++ G Q   +  + 
Sbjct: 337 SMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEY 396

Query: 474 NYDMDVVVANALIDMYAKCGSITDARL-VFDMMNDWNEVSWNAMISGYSMH 523
           N + ++     ++D+  + G + DA + +F M        W A++    MH
Sbjct: 397 NLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMH 447



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 181/375 (48%), Gaps = 17/375 (4%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           Y + + +C +   L  A  IH  +        +F  N L+++Y K   + DA ++FD MP
Sbjct: 67  YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
            R+  S+ + I GY  +    EA+GL   + R   + N F F + LK   +   + +   
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 186

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF-------- 223
           + A   K     + +VG+AL+D ++ CG ++ A  VFD L       +N           
Sbjct: 187 IHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGD 246

Query: 224 -EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
            E  L  F++M+  GF+  +FT++ V  A  G+  +   K  H   +K+   +  +V   
Sbjct: 247 GETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNT 306

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           +LD+Y KSG + +AR++F+ + KKDV+ W+ M+  +AQ  L  +AV  F  MR+  V  N
Sbjct: 307 ILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLN 366

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           Q TF+S+L AC+    +  G Q   ++    L  ++     ++D+  + G + +++    
Sbjct: 367 QITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIF 426

Query: 403 ESP-KRNHVTWNTMI 416
           + P K     W  ++
Sbjct: 427 KMPMKPTAAVWGALL 441



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 161/315 (51%), Gaps = 14/315 (4%)

Query: 324 SIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNA 383
           S+DA EL    R          + S++ ACA    LD    IH+ +        VF+ N+
Sbjct: 54  SVDARELAATPR---------LYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNS 104

Query: 384 LMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPAT 443
           L+ +Y KCG + ++  +F   P R+  +W ++I GY Q     +A+ +   ML  +    
Sbjct: 105 LIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPN 164

Query: 444 EVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFD 503
             T++S+L+A  + A+   G Q+H LTVK ++  DV V +AL+DMYA+CG +  A  VFD
Sbjct: 165 GFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFD 224

Query: 504 MMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQ 563
            +   N VSWNA+I+G++  G     L +F  MQ+ G+   + T+  V SA +  G LEQ
Sbjct: 225 QLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQ 284

Query: 564 GEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGAC 623
           G+     M+ + G         +++ +  ++G +  A K+ + +  +  V+ W ++L A 
Sbjct: 285 GKWVHAHMIKS-GERLSAFVGNTILDMYAKSGSMIDARKVFDRVD-KKDVVTWNSMLTAF 342

Query: 624 IIHNNVEIGRLSAQH 638
             +    +GR +  H
Sbjct: 343 AQYG---LGREAVTH 354



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 119/268 (44%), Gaps = 16/268 (5%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  ++A+ L++   +        IH   +K     D++  + LL++Y +  R+  A  +F
Sbjct: 164 NGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVF 223

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D++  +N +S+   I G+         + +F+ + R G E   F +++    +  +G  E
Sbjct: 224 DQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALE 283

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF---- 223
               V A + K G   +AFVG  ++D ++  G +  ARKVFD +       +N       
Sbjct: 284 QGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFA 343

Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                 EA+  F +MR  G   N  TF  +L AC     ++  K       +   E ++ 
Sbjct: 344 QYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEID 403

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKK 306
             V ++DL  ++G +++A     +MP K
Sbjct: 404 HYVTVVDLLGRAGLLNDALVFIFKMPMK 431


>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g23330
 gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 715

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 240/630 (38%), Positives = 368/630 (58%), Gaps = 47/630 (7%)

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
           F +AL  F +MRA G  P++  F  VLK+C  +  +R  +S HG  ++   + DLY   A
Sbjct: 86  FSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNA 145

Query: 283 LLDLYTK-----------------------SGE-------------ISNARRIFEEMPKK 306
           L+++Y K                       SG+             I + RR+FE MP+K
Sbjct: 146 LMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRK 205

Query: 307 DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIH 366
           DV+ ++ +IA YAQ+ +  DA+ +   M    + P+ FT  SVL   +    +  G +IH
Sbjct: 206 DVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIH 265

Query: 367 SLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVG 426
             V+R G+ SDV++ ++L+D+YAK  R+E+S  +F+    R+ ++WN+++ GYVQ G   
Sbjct: 266 GYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYN 325

Query: 427 KAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALI 486
           +A+ +F +M+  +V    V +SSV+ ACA LA L  G Q+H   ++  +  ++ +A+AL+
Sbjct: 326 EALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALV 385

Query: 487 DMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNL 546
           DMY+KCG+I  AR +FD MN  +EVSW A+I G+++HG   E + +F+ M+++G +PN +
Sbjct: 386 DMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQV 445

Query: 547 TFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEG 606
            FV VL+ACS+ GL+++   YF SM   YG+   +EHY ++  LLGRAG L++A   I  
Sbjct: 446 AFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISK 505

Query: 607 IPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKA 666
           +  +P+  +W  LL +C +H N+E+    A+ I   + E+   +VL+ N+YA    W++ 
Sbjct: 506 MCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEM 565

Query: 667 AS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYI 715
           A            K+P  SWIE +   H F +GD SH  M+ I   L+ +  +  K GY+
Sbjct: 566 AKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYV 625

Query: 716 PDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKII 775
            D S VL DV E+ K   L+ HSE+LA+AF +    P + IR+ KN+RIC DCH AIK I
Sbjct: 626 ADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFI 685

Query: 776 SKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           SKI +REII+RD  RFHHF  G CSCGD+W
Sbjct: 686 SKITEREIIVRDNSRFHHFNRGNCSCGDYW 715



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/398 (24%), Positives = 183/398 (45%), Gaps = 53/398 (13%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKL-------------N 105
           + + L+SC    DL+   ++H  +++ G   DL+  N L+N+Y KL             +
Sbjct: 108 FPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFD 167

Query: 106 RLPDAT-----------------------KLFDEMPERNTISFVTTIQGYTVSSQFVEAV 142
            +P  T                       ++F+ MP ++ +S+ T I GY  S  + +A+
Sbjct: 168 EMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDAL 227

Query: 143 GLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAF 202
            +   +     + + F  ++ L +            +   V + G DS+ ++G++L+D +
Sbjct: 228 RMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMY 287

Query: 203 SVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRAVGFKPNNFTFA 246
           +    +E + +VF  L+                N  + EAL  F QM     KP    F+
Sbjct: 288 AKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFS 347

Query: 247 FVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK 306
            V+ AC  L T+ + K  HG  L+  +  ++++A AL+D+Y+K G I  AR+IF+ M   
Sbjct: 348 SVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVL 407

Query: 307 DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQI 365
           D + W+ +I  +A      +AV LF  M++  V PNQ  FV+VL AC+ +  +D      
Sbjct: 408 DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYF 467

Query: 366 HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
           +S+    GL  ++    A+ D+  + G++E +    ++
Sbjct: 468 NSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISK 505



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 98/385 (25%), Positives = 173/385 (44%), Gaps = 38/385 (9%)

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
           A  ++ +YT    +  A  +F+ +    V+ W  +I  +    L   A+  F  MR +  
Sbjct: 42  ASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGR 101

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC-------- 391
            P+   F SVL++C  M  L  G  +H  +VR+G+  D++  NALM++YAK         
Sbjct: 102 CPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKIS 161

Query: 392 ---------GRMENSVE-------------------LFAESPKRNHVTWNTMIVGYVQLG 423
                     R  NS +                   +F   P+++ V++NT+I GY Q G
Sbjct: 162 VGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSG 221

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN 483
               A+ M  +M    +     T SSVL   +    +  G ++H   ++   D DV + +
Sbjct: 222 MYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGS 281

Query: 484 ALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRP 543
           +L+DMYAK   I D+  VF  +   + +SWN++++GY  +G   E L++F  M     +P
Sbjct: 282 SLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKP 341

Query: 544 NNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKL 603
             + F  V+ AC++   L  G+      V   G    I   +++V +  + G++  A K+
Sbjct: 342 GAVAFSSVIPACAHLATLHLGKQ-LHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKI 400

Query: 604 IEGIPFQPSVMIWRALLGACIIHNN 628
            + +     V  W A++    +H +
Sbjct: 401 FDRMNVLDEVS-WTAIIMGHALHGH 424



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 125/268 (46%), Gaps = 26/268 (9%)

Query: 71  DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQ 130
           D+     IH  V++KG   D++  + L+++Y K  R+ D+ ++F  +  R+ IS+ + + 
Sbjct: 257 DVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVA 316

Query: 131 GYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDS 190
           GY  + ++ EA+ LF  +     +    AF++ +     +    L   +   V + G  S
Sbjct: 317 GYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGS 376

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMR 234
           N F+ +AL+D +S CG ++ ARK+FD +                 +    EA++ F +M+
Sbjct: 377 NIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMK 436

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC---YEMDLYVAVALLDLYTKSG 291
             G KPN   F  VL AC  +  +  A        K      E++ Y AVA  DL  ++G
Sbjct: 437 RQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVA--DLLGRAG 494

Query: 292 EISNARRIFEEM---PKKDVIPWSFMIA 316
           ++  A     +M   P   V  WS +++
Sbjct: 495 KLEEAYNFISKMCVEPTGSV--WSTLLS 520



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/298 (20%), Positives = 121/298 (40%), Gaps = 39/298 (13%)

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
            Q+H+  +R   LS    S  ++ +Y     +  ++ LF        + W ++I  +   
Sbjct: 25  KQLHAQFIRTQSLSHTSAS-IVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQ 83

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
               KA+  F +M           + SVL++C  +  L  G  VH   V+   D D+   
Sbjct: 84  SLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTG 143

Query: 483 NALIDMYAK---------CGSITD---------------------------ARLVFDMMN 506
           NAL++MYAK          G++ D                            R VF++M 
Sbjct: 144 NALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMP 203

Query: 507 DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEA 566
             + VS+N +I+GY+  G+  + L++   M     +P++ T   VL   S    + +G+ 
Sbjct: 204 RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKE 263

Query: 567 YFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACI 624
                V   GI+  +   +S+V +  ++  ++ + ++   +  +  +  W +L+   +
Sbjct: 264 -IHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGIS-WNSLVAGYV 319



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/252 (22%), Positives = 104/252 (41%), Gaps = 24/252 (9%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           ++++ + +C     L     +H  VL+ G   ++F  + L+++Y K   +  A K+FD M
Sbjct: 345 AFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM 404

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
              + +S+   I G+ +     EAV LF  + R+G + N  AF A L     +G  +   
Sbjct: 405 NVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAW 464

Query: 178 CVFAC---VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMR 234
             F     VY L  +   +   A+ D     G +               EEA NF S+M 
Sbjct: 465 GYFNSMTKVYGLNQELEHY--AAVADLLGRAGKL---------------EEAYNFISKM- 506

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
               +P    ++ +L +C     + +A+      + T    ++   V + ++Y  +G   
Sbjct: 507 --CVEPTGSVWSTLLSSCSVHKNLELAEKV-AEKIFTVDSENMGAYVLMCNMYASNGRWK 563

Query: 295 NARRIFEEMPKK 306
              ++   M KK
Sbjct: 564 EMAKLRLRMRKK 575


>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Brachypodium distachyon]
          Length = 1054

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 290/792 (36%), Positives = 438/792 (55%), Gaps = 49/792 (6%)

Query: 54   FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
            F S   ATSL SC      Q    +  +VLK G+  DL+  + L++ + +   L +A  +
Sbjct: 272  FGSLITATSLSSCSSGVLDQ----VFARVLKSGSSSDLYVGSALVSAFARHGMLDEAKDI 327

Query: 114  FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
            F  + ERN ++    I G        EAVG+F    R+   +N   F   L  +      
Sbjct: 328  FINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGT-RDSFVVNTDTFVVLLSAVAEFSIP 386

Query: 174  E----LCPCVFACVYKLGH-DSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------- 219
            E        V   + + G  D    +   L++ ++ CG ++ A +VF  L          
Sbjct: 387  EDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNT 446

Query: 220  -------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC 272
                   N   E A+  +  MR     P+NF     L +C  L  +   +  H  A+K  
Sbjct: 447  IISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWG 506

Query: 273  YEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWS----FMIARYAQTDLSIDAV 328
             ++D  V+ AL+ +Y   G  S +  IF  M + D++ W+     M++ +A T    ++V
Sbjct: 507  LDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPT---AESV 563

Query: 329  ELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVY 388
            E+F  M ++ + PN+ TFV++L A + +  L+LG Q+H++V++ G + D  V NALM  Y
Sbjct: 564  EVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCY 623

Query: 389  AKCGRMENSVELFAE-SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTY 447
            AK G M++  +LF+  S +R+ V+WN+MI GY+  G + + M     M+         T+
Sbjct: 624  AKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTF 683

Query: 448  SSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND 507
            S VL ACAS+AALE GM++H   +++  + DVVV +AL+DMY+KCG I  A  VF+ M+ 
Sbjct: 684  SIVLNACASVAALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQ 743

Query: 508  WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAY 567
             NE SWN+MISGY+ HGL  + L++F+ MQ+ G  P+++TFV VLSACS+ GL+++G  Y
Sbjct: 744  KNEFSWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVDRGLDY 803

Query: 568  FKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
            F+ M+ ++GI P IEHY+ ++ LLGRAG L K  + I  +P +P+ +IWR +L AC    
Sbjct: 804  FE-MMEDHGILPHIEHYSCVIDLLGRAGKLLKIQEYINRMPMKPNTLIWRTVLVACRQSK 862

Query: 628  N---VEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKA-----------ASKEPGL 673
            +   +++G+ +++ +L+ EP++   +VL SN YA    WE               KE G 
Sbjct: 863  DGDRIDLGKEASRMLLELEPQNPVNYVLASNFYAATGRWEDTAKARAAMGGAAMKKEAGQ 922

Query: 674  SWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERY 733
            SW+     VH F AGD SH +   I   L +L  K + AGY+P     L D+ E+ KE  
Sbjct: 923  SWVTLGDGVHTFIAGDRSHPNTKEIYEKLNFLIQKIKNAGYVPMTEFALYDLEEENKEEL 982

Query: 734  LWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHH 793
            L  HSEKLA+AF L +     PIRI+KNLR+C DCHTA + IS+IV R+II+RD  RFHH
Sbjct: 983  LSYHSEKLAVAFVLTRSSSDVPIRIMKNLRVCGDCHTAFRYISQIVCRQIILRDSIRFHH 1042

Query: 794  FQDGCCSCGDFW 805
            F+DG CSCGD+W
Sbjct: 1043 FEDGKCSCGDYW 1054



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 173/587 (29%), Positives = 287/587 (48%), Gaps = 36/587 (6%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           +H +++K+G   DLF +N L+N+Y K +RL  A ++FD M ERN +S+   + GY +S  
Sbjct: 78  LHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSGI 137

Query: 138 FVEAVGLFSTLHREGHELN---PFAFTAFLKVLVSMGWAELCPC--VFACVYKLGHDSNA 192
             EA  +F  +  EG E +   PF F + L+     G   L     V   V K  + SN 
Sbjct: 138 TDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASNT 197

Query: 193 FVGTALIDAFSVC--GCVEFARKVFD--------------------GLFNDCFEEALNFF 230
            V  ALI  +  C  G    A++VFD                    G     F   +   
Sbjct: 198 TVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAML 257

Query: 231 SQMRAVGFKPNNFTFAFVLKAC-LGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK 289
               A+  +PN  TF  ++ A  L   +  V        LK+    DLYV  AL+  + +
Sbjct: 258 HDDSAIELRPNEHTFGSLITATSLSSCSSGVLDQVFARVLKSGSSSDLYVGSALVSAFAR 317

Query: 290 SGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSV 349
            G +  A+ IF  + +++ +  + +I    +   S +AV +F   R +FV  N  TFV +
Sbjct: 318 HGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGTRDSFVV-NTDTFVVL 376

Query: 350 LQACATM----EGLDLGNQIHSLVVRVGLLS-DVFVSNALMDVYAKCGRMENSVELFAES 404
           L A A      +GL  G ++H  ++R GL+   + +SN L+++YAKCG ++ +  +F   
Sbjct: 377 LSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLL 436

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
             R+ V+WNT+I    Q G    AM+ +  M +  +  +     S L +CASL  L  G 
Sbjct: 437 CARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQ 496

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS-GYSMH 523
           QVHC  VK   D+D  V+NAL+ MY  CG+ +++  +F+ M + + VSWN+++    S H
Sbjct: 497 QVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSH 556

Query: 524 GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEH 583
             +AE ++VF  M + G  PN +TFV +LSA S   +LE G+     ++ +  IE     
Sbjct: 557 APTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVD 616

Query: 584 YTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
             +++S   ++G +D   +L   +  +   + W +++   I + +++
Sbjct: 617 -NALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQ 662



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/274 (31%), Positives = 133/274 (48%), Gaps = 21/274 (7%)

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
           ++H  +V+ GL  D+F+SN L+++YAK  R+  + ++F    +RN V+W  ++ GYV  G
Sbjct: 77  RLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSG 136

Query: 424 EVGKAMIMFSKML---EEQVPATEVTYSSVLRAC--ASLAALEPGMQVHCLTVKANYDMD 478
              +A  +F  ML    E    T  T+ SVLRAC  A    L   +QVH L  K  Y  +
Sbjct: 137 ITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASN 196

Query: 479 VVVANALIDMYAKC--GSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLM 536
             V NALI MY  C  G    A+ VFD     + ++WNA++S Y+  G       +F  M
Sbjct: 197 TTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAM 256

Query: 537 QQRG----WRPNNLTFVGV-----LSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSM 587
                    RPN  TF  +     LS+CS+G L +      KS     G    +   +++
Sbjct: 257 LHDDSAIELRPNEHTFGSLITATSLSSCSSGVLDQVFARVLKS-----GSSSDLYVGSAL 311

Query: 588 VSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLG 621
           VS   R G LD+A  +   +  + +V +   ++G
Sbjct: 312 VSAFARHGMLDEAKDIFINLKERNAVTLNGLIVG 345


>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
 gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 241/575 (41%), Positives = 359/575 (62%), Gaps = 15/575 (2%)

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
           +  +L  C+    +R  +  H   +KTCY   +Y++  L+ LYTK   +  AR +F+EM 
Sbjct: 13  YNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMR 72

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
           +++V+ W+ MI+ Y+Q   + +A+ LF +M ++   PN+FTF +VL +C    G +LG Q
Sbjct: 73  ERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQ 132

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
           IHS + +    + +FV ++L+D+YAK GR+  +  +F   P+R+ V+   +I GY QLG 
Sbjct: 133 IHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGL 192

Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA 484
             +A+ +F ++  E + +  VTY+S+L A + LAAL+ G QVH   ++      VV+ N+
Sbjct: 193 DEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNS 252

Query: 485 LIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW-RP 543
           LIDMY+KCG++  AR +F+ M     +SWNAM+ GYS HG   EV+K+F LM++    +P
Sbjct: 253 LIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKP 312

Query: 544 NNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG--IEPCIEHYTSMVSLLGRAGHLDKAA 601
           +++TF+ VLS CS+GGL ++G   F  M+ N G  IE  IEHY  ++ LLGRAG +++A 
Sbjct: 313 DSVTFLAVLSGCSHGGLEDKGLEMFDEMM-NGGDEIEAGIEHYGCVIDLLGRAGRVEEAF 371

Query: 602 KLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMAR 661
           +LI+ +PF+P+  IW +LLGAC +H+N  IG      +L+ EPE+   +V+LSN+YA A 
Sbjct: 372 ELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYASAG 431

Query: 662 SW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSR 710
            W           EKA  KEPG SWIE    +H F A D SH     +   +  L +K +
Sbjct: 432 RWEDVRNVRELMMEKAVIKEPGRSWIELDQTIHTFYASDRSHPRREEVFLKVRELLVKFK 491

Query: 711 KAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHT 770
           ++GY+PD S VL DV E++KE+ L  HSEKLALAF L       P+R+IKNLRICVDCH 
Sbjct: 492 ESGYVPDQSCVLYDVDEEQKEKILLGHSEKLALAFGLISTSEGVPLRVIKNLRICVDCHN 551

Query: 771 AIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
             K +SK+  R++ IRD +RFHH   G CSCGD+W
Sbjct: 552 FAKFVSKVYGRQVSIRDKNRFHHVAGGICSCGDYW 586



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 187/351 (53%), Gaps = 20/351 (5%)

Query: 193 FVGTALIDAFSVCGCVEFARKVFD---------------GLFNDCF-EEALNFFSQMRAV 236
           ++ T LI  ++ C C+  AR VFD               G     F  EAL+ F QM   
Sbjct: 46  YLSTRLIILYTKCECLGCARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRS 105

Query: 237 GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNA 296
             +PN FTFA VL +C G     + +  H    K  YE  ++V  +LLD+Y K+G I  A
Sbjct: 106 DTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEA 165

Query: 297 RRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM 356
           R +FE +P++DV+  + +I+ YAQ  L  +A+ELFCR+++  ++ N  T+ S+L A + +
Sbjct: 166 RGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGL 225

Query: 357 EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMI 416
             LD G Q+HS V+R  L   V + N+L+D+Y+KCG +  + ++F   P R  ++WN M+
Sbjct: 226 AALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAML 285

Query: 417 VGYVQLGEVGKAMIMFSKMLEE-QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY 475
           VGY + G+  + + +F  M EE +V    VT+ +VL  C+     + G+++    +    
Sbjct: 286 VGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGD 345

Query: 476 DMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
           +++  + +   +ID+  + G + +A  L+  M  +     W +++    +H
Sbjct: 346 EIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVH 396



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 184/386 (47%), Gaps = 24/386 (6%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E     Y   L  C+    ++    +H  ++K      ++ +  L+ +Y K   L  A  
Sbjct: 7   EIKFDGYNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARH 66

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +FDEM ERN +S+   I GY+      EA+ LF  + R   E N F F   L        
Sbjct: 67  VFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSG 126

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN----DCF----- 223
            EL   + + ++K  ++++ FVG++L+D ++  G +  AR VF+ L       C      
Sbjct: 127 FELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISG 186

Query: 224 -------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
                  EEAL  F +++  G   N  T+A +L A  GL  +   K  H   L+   E+ 
Sbjct: 187 YAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRC--ELP 244

Query: 277 LYVAV--ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
            YV +  +L+D+Y+K G ++ AR+IF  MP + VI W+ M+  Y++    I+ V+LF  M
Sbjct: 245 FYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLM 304

Query: 335 RQA-FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG--LLSDVFVSNALMDVYAKC 391
           R+   V P+  TF++VL  C+     D G ++   ++  G  + + +     ++D+  + 
Sbjct: 305 REENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRA 364

Query: 392 GRMENSVELFAESP-KRNHVTWNTMI 416
           GR+E + EL  + P +     W +++
Sbjct: 365 GRVEEAFELIKKMPFEPTAAIWGSLL 390



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 124/313 (39%), Gaps = 57/313 (18%)

Query: 26  RGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKK 85
           RG +++A     Q   S T P        N  ++AT L SC      +    IH  + K+
Sbjct: 89  RGFASEALHLFVQMLRSDTEP--------NEFTFATVLSSCTGFSGFELGRQIHSHIFKR 140

Query: 86  GNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLF 145
                +F  + LL++Y K  R+ +A  +F+ +PER+ +S    I GY       EA+ LF
Sbjct: 141 NYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELF 200

Query: 146 STLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVC 205
             L REG   N   + + L  L  +   +    V + V +        +  +LID +S C
Sbjct: 201 CRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKC 260

Query: 206 GCVEFARKVFDGL-------FNDCFE---------EALNFFSQMRAVG-FKPNNFTFAFV 248
           G + +ARK+F+ +       +N             E +  F  MR     KP++ TF  V
Sbjct: 261 GNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAV 320

Query: 249 LKACL-----------------GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
           L  C                  G D I      +GC               ++DL  ++G
Sbjct: 321 LSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGC---------------VIDLLGRAG 365

Query: 292 EISNARRIFEEMP 304
            +  A  + ++MP
Sbjct: 366 RVEEAFELIKKMP 378


>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 810

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 276/786 (35%), Positives = 418/786 (53%), Gaps = 32/786 (4%)

Query: 52  SEFNSH--SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD 109
           +EFN+   ++   +++C  + D      IH  V+K G  LD+F  N L+ +Y K   +  
Sbjct: 25  TEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDA 84

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTL--HREGHELNPFAFTAFLKVL 167
           A K+F  MP RN +S+ + I G++ +    +   +   +    EG   +       L V 
Sbjct: 85  AVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVC 144

Query: 168 VSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD----------- 216
                 ++   +     KLG   +  V  +L+D +S CG +  A+ +FD           
Sbjct: 145 AREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWN 204

Query: 217 ----GLFNDCFE-EALNFFSQMR-AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALK 270
               GL    +  EA N F +M+     + N  T   +L ACL +  +R  K  HG +++
Sbjct: 205 TMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIR 264

Query: 271 TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVEL 330
             ++ D  VA   +  Y K G +  A R+F  M  K V  W+ +I   AQ      A+ L
Sbjct: 265 HGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNL 324

Query: 331 FCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAK 390
           + +M  + + P+ FT  S+L A A ++ L  G ++H  V+R GL  D F+  +L+ +Y  
Sbjct: 325 YIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIH 384

Query: 391 CGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
           CG   ++  LF    +++ V+WN MI GY Q G    A+I+F K++ +    +++   SV
Sbjct: 385 CGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSV 444

Query: 451 LRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE 510
           L AC+  +AL  G + HC  +KA    DV VA + IDMYAK G I ++R VFD + + + 
Sbjct: 445 LGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDL 504

Query: 511 VSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKS 570
            SWNA+I+ Y +HG   E +++F+ M++ G  P+  TF+G+L+ CS+ GL+E+G  YF  
Sbjct: 505 ASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNE 564

Query: 571 MVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
           M   +GIEP +EHY  ++ +LGRAG LD A +L+  +P QP   +W +LL  C     +E
Sbjct: 565 MQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELE 624

Query: 631 IGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEK-----------AASKEPGLSWIENQ 679
           IG++ A+ +L+ EP++   +V LSN+YA +  W+               K+ G SWIE  
Sbjct: 625 IGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIELG 684

Query: 680 GMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSE 739
           G VH F AGD        +      L  K  K GY P+ SAVL DV E++K   L  HSE
Sbjct: 685 GKVHSFVAGDNLLPQSKEMSMTWRKLEKKMCKIGYKPNTSAVLHDVDEEKKIEKLRGHSE 744

Query: 740 KLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCC 799
           KLA+ F L      + +RI KNLRICVDCH A K +S++  REIIIRD  RFHHF+DG C
Sbjct: 745 KLAICFGLLNTTKGTTLRIFKNLRICVDCHNASKFMSEVTGREIIIRDNKRFHHFKDGLC 804

Query: 800 SCGDFW 805
           SCGD+W
Sbjct: 805 SCGDYW 810


>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Glycine max]
          Length = 1033

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 276/759 (36%), Positives = 427/759 (56%), Gaps = 52/759 (6%)

Query: 90   DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
            DL+  + L++ + +   +  A  +F++M +RN ++    + G     Q  EA  +F  + 
Sbjct: 284  DLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEM- 342

Query: 150  REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAF------------VGTA 197
            ++  E+N  ++   L         +          + G + +A+            +G A
Sbjct: 343  KDLVEINASSYAVLLSAFTEFSNLKEGK-------RKGQEVHAYLIRNALVDVWILIGNA 395

Query: 198  LIDAFSVCGCVEFARKVFD---------------GL-FNDCFEEALNFFSQMRAVGFKPN 241
            L++ ++ C  ++ AR +F                GL  N+ FEEA+  F  MR  G  P+
Sbjct: 396  LVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPS 455

Query: 242  NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
             F+    L +C  L  I + +  HG  +K   ++D+ V+ ALL LY ++  +   +++F 
Sbjct: 456  KFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFF 515

Query: 302  EMPKKDVIPWSFMIARYAQTDLSI-DAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLD 360
             MP+ D + W+  I   A ++ S+  A++ F  M QA   PN+ TF+++L A +++  L+
Sbjct: 516  LMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLE 575

Query: 361  LGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE-SPKRNHVTWNTMIVGY 419
            LG QIH+L+++  +  D  + N L+  Y KC +ME+   +F+  S +R+ V+WN MI GY
Sbjct: 576  LGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGY 635

Query: 420  VQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDV 479
            +  G + KAM +   M+++     + T ++VL ACAS+A LE GM+VH   ++A  + +V
Sbjct: 636  IHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRACLEAEV 695

Query: 480  VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
            VV +AL+DMYAKCG I  A   F++M   N  SWN+MISGY+ HG   + LK+F  M+Q 
Sbjct: 696  VVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQH 755

Query: 540  GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDK 599
            G  P+++TFVGVLSACS+ GL+++G  +FKSM   Y + P IEH++ MV LLGRAG + K
Sbjct: 756  GQLPDHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLGRAGDVKK 815

Query: 600  AAKLIEGIPFQPSVMIWRALLGACIIHN--NVEIGRLSAQHILDFEPEDEATHVLLSNIY 657
              + I+ +P  P+ +IWR +LGAC   N  N E+GR +A+ +++ EP +   +VLLSN++
Sbjct: 816  LEEFIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKMLIELEPLNAVNYVLLSNMH 875

Query: 658  AMARSWEKA-----------ASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLN 706
            A    WE               KE G SW+  +  VH F AGD +H +   I   L+ + 
Sbjct: 876  AAGGKWEDVEEARLAMRNAEVKKEAGCSWVTMKDGVHVFVAGDQTHPEKEKIYDKLKEIM 935

Query: 707  MKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICV 766
             K R  GY+P+    L D+  + KE  L  HSEKLA+AF L +     PIRIIKNLR+C 
Sbjct: 936  NKMRDLGYVPETKYALYDLELENKEELLSYHSEKLAIAFVLTR-QSELPIRIIKNLRVCG 994

Query: 767  DCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            DCHTA K IS IV R+II+RD +RFHHF  G CSC D+W
Sbjct: 995  DCHTAFKYISNIVNRQIILRDSNRFHHFDGGICSCQDYW 1033



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 154/557 (27%), Positives = 272/557 (48%), Gaps = 43/557 (7%)

Query: 29  SAQAALSTQ---QCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKK 85
           S Q ALS Q    C NS+   + F     + + Y     SC   D    A  +H Q+ K 
Sbjct: 17  STQLALSEQLLHHC-NSSHHHLHFPPLNLDYNRYR---DSCTVED----AHQLHLQIYKT 68

Query: 86  GNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLF 145
           G   D+F  N L+N++V+   L  A KLFDEMP++N +S+   + GY  +    EA  LF
Sbjct: 69  GLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNGMPDEACMLF 128

Query: 146 STLHREGHELNPFAFTAFLKVLVSMG--WAELCPCVFACVYKLGHDSNAFVGTALIDAFS 203
             +   G   N +A  + L+    +G    +L   +   + K  + S+  +   L+  +S
Sbjct: 129 RGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYS 188

Query: 204 VCGC-VEFARKVFDGL-------FNDCFE---------EALNFFSQMR----AVGFKPNN 242
            C   ++ AR+VF+ +       +N              A   FS M+     +  +PN 
Sbjct: 189 HCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREATELNCRPNE 248

Query: 243 FTF-AFVLKACLGLD-TIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIF 300
           +TF + V  AC  +D  + + +       K+ +  DLYV  AL+  + + G I +A+ IF
Sbjct: 249 YTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIF 308

Query: 301 EEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM---- 356
           E+M  ++ +  + ++   A+     +A ++F  M+   V  N  ++  +L A        
Sbjct: 309 EQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKD-LVEINASSYAVLLSAFTEFSNLK 367

Query: 357 EGLDLGNQIHSLVVRVGLLSD-VFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTM 415
           EG   G ++H+ ++R  L+   + + NAL+++YAKC  ++N+  +F   P ++ V+WN++
Sbjct: 368 EGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSI 427

Query: 416 IVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY 475
           I G        +A+  F  M    +  ++ +  S L +CASL  +  G Q+H   +K   
Sbjct: 428 ISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGL 487

Query: 476 DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSA-EVLKVFD 534
           D+DV V+NAL+ +YA+   + + + VF +M ++++VSWN+ I   +    S  + +K F 
Sbjct: 488 DLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFL 547

Query: 535 LMQQRGWRPNNLTFVGV 551
            M Q GW+PN +TF+ +
Sbjct: 548 EMMQAGWKPNRVTFINI 564



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 103/403 (25%), Positives = 202/403 (50%), Gaps = 20/403 (4%)

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR 297
           F P N  +     +C    T+  A   H    KT    D++    L++++ ++G + +A+
Sbjct: 39  FPPLNLDYNRYRDSC----TVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQ 94

Query: 298 RIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM- 356
           ++F+EMP+K+++ WS +++ YAQ  +  +A  LF  +  A + PN +   S L+AC  + 
Sbjct: 95  KLFDEMPQKNLVSWSCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELG 154

Query: 357 -EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC-GRMENSVELFAESPKRNHVTWNT 414
              L LG +IH L+ +    SD+ +SN LM +Y+ C   ++++  +F E   +   +WN+
Sbjct: 155 PNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNS 214

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVP----ATEVTYSSVLRACASLA--ALEPGMQVHC 468
           +I  Y + G+   A  +FS M  E         E T+ S++    SL    L    Q+  
Sbjct: 215 IISVYCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLA 274

Query: 469 LTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAE 528
              K+++  D+ V +AL+  +A+ G I  A+++F+ M+D N V+ N ++ G +      E
Sbjct: 275 RIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEE 334

Query: 529 VLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKS----MVANYGIEPCIEHY 584
             K+F  M+      N  ++  +LSA +    L++G+   +     ++ N  ++  I   
Sbjct: 335 AAKIFKEMKDL-VEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIG 393

Query: 585 TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
            ++V+L  +   +D A  + + +P + +V  W +++   + HN
Sbjct: 394 NALVNLYAKCNAIDNARSIFQLMPSKDTVS-WNSIISG-LDHN 434



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 148/284 (52%), Gaps = 14/284 (4%)

Query: 362 GNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQ 421
            +Q+H  + + GL SDVF  N L++++ + G + ++ +LF E P++N V+W+ ++ GY Q
Sbjct: 58  AHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQ 117

Query: 422 LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA--LEPGMQVHCLTVKANYDMDV 479
            G   +A ++F  ++   +        S LRAC  L    L+ GM++H L  K+ Y  D+
Sbjct: 118 NGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDM 177

Query: 480 VVANALIDMYAKC-GSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
           V++N L+ MY+ C  SI DAR VF+ +      SWN++IS Y   G +    K+F  MQ+
Sbjct: 178 VLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQR 237

Query: 539 RGW----RPNNLTFVGVLS-ACSNGGLLEQGEAYFKSMVANYGIEPCIEHY---TSMVSL 590
                  RPN  TF  +++ ACS   L++ G    + M+A       ++     +++VS 
Sbjct: 238 EATELNCRPNEYTFCSLVTVACS---LVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSG 294

Query: 591 LGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL 634
             R G +D A  + E +  + +V +   ++G    H   E  ++
Sbjct: 295 FARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKI 338



 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 27/114 (23%), Positives = 53/114 (46%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           + AT L +C     L+  M +H   ++     ++   + L+++Y K  ++  A++ F+ M
Sbjct: 662 TLATVLSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELM 721

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
           P RN  S+ + I GY       +A+ LF+ + + G   +   F   L     +G
Sbjct: 722 PVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACSHVG 775


>gi|297739749|emb|CBI29931.3| unnamed protein product [Vitis vinifera]
          Length = 838

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 271/831 (32%), Positives = 432/831 (51%), Gaps = 81/831 (9%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +Y    + C  +  L  A  +H ++ K G   +    + L+++Y+    + +A KLF
Sbjct: 9   NVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLF 68

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA- 173
           D++P  N   +   I G        + +GLFS +  E    +   F + L+   S G A 
Sbjct: 69  DDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA-CSGGKAP 127

Query: 174 -ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------------- 219
            ++   + A +   G  S+  V   LID +S  G V+ A+ VF+ LF             
Sbjct: 128 FQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISG 187

Query: 220 ---NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
              N   +EA+  F QM      P  + F+ VL AC  ++  ++ +  HG  +K     +
Sbjct: 188 LSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSE 247

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
            +V  AL+ LY++ G +  A +IF +M ++D I ++ +I+  AQ   S  A++LF +M+ 
Sbjct: 248 TFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQL 307

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             + P+  T  S+L ACA++     G Q+HS V+++G+ SD+ +  +L+D+Y KC  +E 
Sbjct: 308 DCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIET 367

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           + E F  +   N V WN M+V Y QLG + ++  +F +M  E +   + TY S+LR C S
Sbjct: 368 AHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTS 427

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           L AL+ G Q+H   +K+ +  +V V + LIDMYAK G +  AR +   + + + VSW AM
Sbjct: 428 LGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAM 487

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEA-YFKSMVANY 575
           I+GY+ H L AE LK+F  M+ +G R +N+ F   +SAC+    L QG+  + +S ++ Y
Sbjct: 488 IAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGY 547

Query: 576 G----------------------------------IEPCIEHYTSMVSLLGRAGHLDKAA 601
                                               E  +  + +M++   + G+  +A 
Sbjct: 548 SEDLSIGNALASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAV 607

Query: 602 KLIEGI----------------PFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPE 645
            L E +                P +P  MIWR LL AC +H N+EIG  +A+H+L+ EPE
Sbjct: 608 SLFEEMKQLGLMPNHVTFVGEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPE 667

Query: 646 DEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHAD 694
           D AT+VLLSN+YA++  W+           +   KEPG SWIE +  +H F  GD  H  
Sbjct: 668 DSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPL 727

Query: 695 MNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSS 754
              I   ++ LN ++ + GY+ D   +L DV +++K+   ++HSEKLA+AF L  +  + 
Sbjct: 728 AEQIYEYIDDLNERAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTM 787

Query: 755 PIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           PIR+IKNLR+C DCH  IK +SKI  R I++RD +RFHHF+ G CSC D+W
Sbjct: 788 PIRVIKNLRVCNDCHNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW 838



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 179/334 (53%), Gaps = 1/334 (0%)

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           M   G + N  T+ ++ + C    ++  AK  H    K+ ++ +  +   L+D+Y   GE
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           + NA ++F+++P  +V  W+ +I+      L+   + LF  M    V P++ TF SVL+A
Sbjct: 61  VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120

Query: 353 CATMEG-LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
           C+  +    +  QIH+ ++  G  S   V N L+D+Y+K G ++ +  +F     ++ V+
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
           W  MI G  Q G   +A+++F +M +  V  T   +SSVL AC  +   + G Q+H   V
Sbjct: 181 WVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIV 240

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
           K     +  V NAL+ +Y++ G++  A  +F  M+  + +S+N++ISG +  G S   L+
Sbjct: 241 KWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQ 300

Query: 532 VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE 565
           +F+ MQ    +P+ +T   +LSAC++ G   +G+
Sbjct: 301 LFEKMQLDCMKPDCVTVASLLSACASVGAGYKGK 334



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 1/188 (0%)

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGS 494
           M E  + A   TY  +   C +  +L    ++H    K+ +D + V+ + LID+Y   G 
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 495 ITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSA 554
           + +A  +FD +   N   WN +ISG     L+++VL +F LM      P+  TF  VL A
Sbjct: 61  VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120

Query: 555 CSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVM 614
           CS G    Q      + + ++G          ++ L  + GH+D A  + E +  + SV 
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180

Query: 615 IWRALLGA 622
            W A++  
Sbjct: 181 -WVAMISG 187


>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 235/596 (39%), Positives = 354/596 (59%), Gaps = 11/596 (1%)

Query: 221 DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
           DCF++A++ +  MR  GF PNNFT  FVLKAC     +R+    H   +K  Y+ D++V 
Sbjct: 93  DCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVK 152

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
            +LL LY K     +A ++F+++P K+V+ W+ +I  Y  +    +A+  F ++ +  + 
Sbjct: 153 TSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLK 212

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           P+ F+ V VL ACA +     G  I   +   G+  +VFV+ +L+D+Y KCG +E +  +
Sbjct: 213 PDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLI 272

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F+  P+++ V+W+TMI GY   G   +A+ +F +M  E +     T   VL ACA+L AL
Sbjct: 273 FSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGAL 332

Query: 461 EPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY 520
           + G+    L  +  +  + V+  ALIDMY+KCGS+T A  +F  M   + V WNAM+ G 
Sbjct: 333 DLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGL 392

Query: 521 SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPC 580
           SM+G +  V  +F L+++ G RP+  TF+G+L  C++GG + +G  +F +M   + + P 
Sbjct: 393 SMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPS 452

Query: 581 IEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHIL 640
           IEHY  MV LLGRAG L++A +LI  +P +P+ ++W ALLG C +H +  +     + ++
Sbjct: 453 IEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLI 512

Query: 641 DFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGD 689
           + EP +   +V LSNIY+    WE+A             K    SWIE  G+VH F  GD
Sbjct: 513 ELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGD 572

Query: 690 TSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFK 749
            SH     I   L+ L  + +  G++P    VL D+ E+EKE +L  HSEKLA+AF L  
Sbjct: 573 KSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIA 632

Query: 750 MPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            PP+  IR++KNLR+C DCH AIK+ISKI +REIIIRD +RFH F DG CSC D+W
Sbjct: 633 SPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSCSCRDYW 688



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/381 (30%), Positives = 195/381 (51%), Gaps = 6/381 (1%)

Query: 243 FTFAFVLKACL--GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIF 300
           F+ A  +K  L  GL+     K  H   L+   + D Y+   +L      G  + ++ +F
Sbjct: 12  FSKALEIKNYLSNGLNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVF 71

Query: 301 EEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLD 360
            ++ + ++  W+ MI      D   DA+ L+  MR     PN FT   VL+ACA    + 
Sbjct: 72  SQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVR 131

Query: 361 LGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYV 420
           LG +IHSL+V+ G   DVFV  +L+ +Y KC   ++++++F + P +N V+W  +I GY+
Sbjct: 132 LGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYI 191

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV 480
             G   +A+  F K+LE  +     +   VL ACA L     G  +      +    +V 
Sbjct: 192 SSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVF 251

Query: 481 VANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG 540
           VA +L+DMY KCG++  A L+F  M + + VSW+ MI GY+ +GL  + L +F  MQ   
Sbjct: 252 VATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSEN 311

Query: 541 WRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN-YGIEPCIEHYTSMVSLLGRAGHLDK 599
            +P+  T VGVLSAC+  G L+ G      M  N +   P +   T+++ +  + G + +
Sbjct: 312 LKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLG--TALIDMYSKCGSVTQ 369

Query: 600 AAKLIEGIPFQPSVMIWRALL 620
           A ++   +  +  V +W A++
Sbjct: 370 AWEIFTAMKKKDRV-VWNAMM 389



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 179/382 (46%), Gaps = 18/382 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N+ +    L++C +  D++  + IH  ++K G   D+F    LL++YVK +   DA K+F
Sbjct: 113 NNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVF 172

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D++P++N +S+   I GY  S  F EA+G F  L   G + + F+    L     +G   
Sbjct: 173 DDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCT 232

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------- 218
               +   +   G   N FV T+L+D +  CG +E A  +F  +                
Sbjct: 233 SGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYA 292

Query: 219 FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
           FN   ++AL+ F QM++   KP+ +T   VL AC  L  + +   A     +  +  +  
Sbjct: 293 FNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPV 352

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           +  AL+D+Y+K G ++ A  IF  M KKD + W+ M+   +    +     LF  + +  
Sbjct: 353 LGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHG 412

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV-GLLSDVFVSNALMDVYAKCGRMENS 397
           + P++ TF+ +L  C     ++ G Q  + + RV  L   +     ++D+  + G +  +
Sbjct: 413 IRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEA 472

Query: 398 VELFAESP-KRNHVTWNTMIVG 418
            +L    P K N V W  ++ G
Sbjct: 473 HQLINNMPMKPNAVVWGALLGG 494


>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 235/596 (39%), Positives = 354/596 (59%), Gaps = 11/596 (1%)

Query: 221 DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
           DCF++A++ +  MR  GF PNNFT  FVLKAC     +R+    H   +K  Y+ D++V 
Sbjct: 93  DCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVK 152

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
            +LL LY K     +A ++F+++P K+V+ W+ +I  Y  +    +A+  F ++ +  + 
Sbjct: 153 TSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLK 212

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           P+ F+ V VL ACA +     G  I   +   G+  +VFV+ +L+D+Y KCG +E +  +
Sbjct: 213 PDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLI 272

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F+  P+++ V+W+TMI GY   G   +A+ +F +M  E +     T   VL ACA+L AL
Sbjct: 273 FSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGAL 332

Query: 461 EPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY 520
           + G+    L  +  +  + V+  ALIDMY+KCGS+T A  +F  M   + V WNAM+ G 
Sbjct: 333 DLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGL 392

Query: 521 SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPC 580
           SM+G +  V  +F L+++ G RP+  TF+G+L  C++GG + +G  +F +M   + + P 
Sbjct: 393 SMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPS 452

Query: 581 IEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHIL 640
           IEHY  MV LLGRAG L++A +LI  +P +P+ ++W ALLG C +H +  +     + ++
Sbjct: 453 IEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLI 512

Query: 641 DFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGD 689
           + EP +   +V LSNIY+    WE+A             K    SWIE  G+VH F  GD
Sbjct: 513 ELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGD 572

Query: 690 TSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFK 749
            SH     I   L+ L  + +  G++P    VL D+ E+EKE +L  HSEKLA+AF L  
Sbjct: 573 KSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIA 632

Query: 750 MPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            PP+  IR++KNLR+C DCH AIK+ISKI +REIIIRD +RFH F DG CSC D+W
Sbjct: 633 SPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSCSCRDYW 688



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/381 (30%), Positives = 195/381 (51%), Gaps = 6/381 (1%)

Query: 243 FTFAFVLKACL--GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIF 300
           F+ A  +K  L  GL+     K  H   L+   + D Y+   +L      G  + ++ +F
Sbjct: 12  FSKALEIKNYLSNGLNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVF 71

Query: 301 EEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLD 360
            ++ + ++  W+ MI      D   DA+ L+  MR     PN FT   VL+ACA    + 
Sbjct: 72  SQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVR 131

Query: 361 LGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYV 420
           LG +IHSL+V+ G   DVFV  +L+ +Y KC   ++++++F + P +N V+W  +I GY+
Sbjct: 132 LGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYI 191

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV 480
             G   +A+  F K+LE  +     +   VL ACA L     G  +      +    +V 
Sbjct: 192 SSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVF 251

Query: 481 VANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG 540
           VA +L+DMY KCG++  A L+F  M + + VSW+ MI GY+ +GL  + L +F  MQ   
Sbjct: 252 VATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSEN 311

Query: 541 WRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN-YGIEPCIEHYTSMVSLLGRAGHLDK 599
            +P+  T VGVLSAC+  G L+ G      M  N +   P +   T+++ +  + G + +
Sbjct: 312 LKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLG--TALIDMYSKCGSVTQ 369

Query: 600 AAKLIEGIPFQPSVMIWRALL 620
           A ++   +  +  V +W A++
Sbjct: 370 AWEIFTAMKRKDRV-VWNAMM 389



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 179/382 (46%), Gaps = 18/382 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N+ +    L++C +  D++  + IH  ++K G   D+F    LL++YVK +   DA K+F
Sbjct: 113 NNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVF 172

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D++P++N +S+   I GY  S  F EA+G F  L   G + + F+    L     +G   
Sbjct: 173 DDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCT 232

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------- 218
               +   +   G   N FV T+L+D +  CG +E A  +F  +                
Sbjct: 233 SGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYA 292

Query: 219 FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
           FN   ++AL+ F QM++   KP+ +T   VL AC  L  + +   A     +  +  +  
Sbjct: 293 FNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPV 352

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           +  AL+D+Y+K G ++ A  IF  M +KD + W+ M+   +    +     LF  + +  
Sbjct: 353 LGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHG 412

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV-GLLSDVFVSNALMDVYAKCGRMENS 397
           + P++ TF+ +L  C     ++ G Q  + + RV  L   +     ++D+  + G +  +
Sbjct: 413 IRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEA 472

Query: 398 VELFAESP-KRNHVTWNTMIVG 418
            +L    P K N V W  ++ G
Sbjct: 473 HQLINNMPMKPNAVVWGALLGG 494


>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
          Length = 1286

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 236/571 (41%), Positives = 348/571 (60%), Gaps = 13/571 (2%)

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY-EMDLYVAVALLDLYTKSGEISNARR 298
           P+   ++ +LK C  L  +   +  H   + + + +  L +   ++++Y K G + +ARR
Sbjct: 85  PDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARR 144

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           +F+EMP KD++ W+ +IA ++Q +   DA+ LF +M +    PN FT  S+L+A  +  G
Sbjct: 145 MFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHG 204

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           LD G Q+H+  ++ G  S V+V +AL+D+YA+CG M+ +   F   P ++ V+WN +I G
Sbjct: 205 LDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISG 264

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           + + GE   A+ +  KM  +    T  TYSSVL ACAS+ ALE G  VH   +K+   + 
Sbjct: 265 HARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLI 324

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
             + N L+DMYAK GSI DA+ VFD +   + VSWN M++G + HGL  E L  F+ M +
Sbjct: 325 AFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLR 384

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLD 598
            G  PN ++F+ VL+ACS+ GLL++G  YF+ ++  Y +EP + HY + V LLGR G LD
Sbjct: 385 IGIEPNEISFLCVLTACSHSGLLDEGLYYFE-LMKKYKVEPDVPHYVTFVDLLGRVGLLD 443

Query: 599 KAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYA 658
           +A + I  +P +P+  +W ALLGAC +H N+E+G  +A+   + +P D    +LLSNIYA
Sbjct: 444 RAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYA 503

Query: 659 MARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNM 707
            A  W           E    K+P  SW+E +  VH F A D +H  +  IRG  E ++ 
Sbjct: 504 SAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEIRGKWEEISG 563

Query: 708 KSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVD 767
           K ++ GY+PD S VL  V + E+E  L  HSEKLALAFAL   P  SPIRI KN+R+C D
Sbjct: 564 KIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNIRVCGD 623

Query: 768 CHTAIKIISKIVQREIIIRDVHRFHHFQDGC 798
           CH AIK +SK+V REII+RD +RFH F+DG 
Sbjct: 624 CHAAIKFVSKVVDREIIVRDTNRFHRFRDGS 654



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 186/365 (50%), Gaps = 19/365 (5%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLD--LFATNVLLNVYVKLNRLPDATKLFDE 116
           Y+  L+ C +   ++    +H  ++   + LD  L   N+++N+Y K   L DA ++FDE
Sbjct: 90  YSKLLKECTRLGKVEQGRIVHAHLVD-SHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDE 148

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
           MP ++ +++   I G++ +++  +A+ LF  + R G + N F  ++ LK   S    +  
Sbjct: 149 MPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPG 208

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDC-------------- 222
             + A   K G+ S+ +VG+AL+D ++ CG ++ A+  FDG+                  
Sbjct: 209 TQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARK 268

Query: 223 --FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
              E AL+   +M+   F+P +FT++ VL AC  +  +   K  H   +K+  ++  ++ 
Sbjct: 269 GEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIG 328

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
             LLD+Y K+G I +A+R+F+ + K DV+ W+ M+   AQ  L  + ++ F +M +  + 
Sbjct: 329 NTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIE 388

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           PN+ +F+ VL AC+    LD G     L+ +  +  DV      +D+  + G ++ +   
Sbjct: 389 PNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERF 448

Query: 401 FAESP 405
             E P
Sbjct: 449 IREMP 453



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 113/266 (42%), Gaps = 16/266 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  + ++ L++      L     +H   LK G    ++  + L+++Y +   +  A   F
Sbjct: 188 NHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAF 247

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D MP ++ +S+   I G+    +   A+ L   + R+  +   F +++ L    S+G  E
Sbjct: 248 DGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALE 307

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-----------FNDCF 223
               V A + K G    AF+G  L+D ++  G ++ A++VFD L              C 
Sbjct: 308 QGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCA 367

Query: 224 E-----EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
           +     E L+ F QM  +G +PN  +F  VL AC     +           K   E D+ 
Sbjct: 368 QHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVP 427

Query: 279 VAVALLDLYTKSGEISNARRIFEEMP 304
             V  +DL  + G +  A R   EMP
Sbjct: 428 HYVTFVDLLGRVGLLDRAERFIREMP 453


>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
          Length = 748

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 259/682 (37%), Positives = 390/682 (57%), Gaps = 35/682 (5%)

Query: 156 NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGH-DSNAFVGTALIDAFSVCGCVEFARKV 214
           + F F   L+     G A     + AC  +LG    +AF   AL+ A+   G V  A + 
Sbjct: 70  DAFTFPPLLRAAQGPGTAAQ---LHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRA 126

Query: 215 FDGLF----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTI 258
           FD +                 N    EA+  F +M   G   +  T + VL  C+ L   
Sbjct: 127 FDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDR 186

Query: 259 RVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARY 318
            +A + H  A+K   + +L+V  A++D+Y K G +   R++F+ M  +D++ W+ +I+ +
Sbjct: 187 ALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGH 246

Query: 319 AQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL-LSD 377
            Q      AVE+FC MR + V+P+  T +S+  A A    +  G  +H  +VR G  + D
Sbjct: 247 EQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGD 306

Query: 378 VFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
           +   NA++D+YAK  ++E +  +F   P R+ V+WNT+I GY+Q G   +A+ ++  M +
Sbjct: 307 IIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQK 366

Query: 438 -EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSIT 496
            E +   + T+ SVL A + L AL+ G ++H L++K   ++DV V   +ID+YAKCG + 
Sbjct: 367 HEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLD 426

Query: 497 DARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS 556
           +A L+F+     +   WNA+ISG  +HG  A+ L +F  MQQ G  P+++TFV +L+ACS
Sbjct: 427 EAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACS 486

Query: 557 NGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIW 616
           + GL++QG  +F  M   YGI+P  +HY  MV + GRAG LD A   I  +P +P   IW
Sbjct: 487 HAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIW 546

Query: 617 RALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE-----------K 665
            ALLGAC IH NVE+G++++Q++ + +P++   +VL+SN+YA    W+           +
Sbjct: 547 GALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQ 606

Query: 666 AASKEPGLSWIENQGMVHYFRAGDTS--HADMNIIRGMLEWLNMKSRKAGYIPDLSAVLR 723
              K PG S IE +  V+ F +G+    H     I+  L  L  K R  GY+PD S VL+
Sbjct: 607 NLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQHEEIQRELLDLLAKIRSLGYVPDYSFVLQ 666

Query: 724 DVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREI 783
           DV EDEKE+ L  HSE+LA+AF +   PP +P+ I KNLR+C DCH A K ISKI +REI
Sbjct: 667 DVEEDEKEQILNNHSERLAIAFGIINTPPRTPLHIYKNLRVCGDCHNATKYISKITEREI 726

Query: 784 IIRDVHRFHHFQDGCCSCGDFW 805
           I+RD +RFHHF+DG CSCGDFW
Sbjct: 727 IVRDSNRFHHFKDGYCSCGDFW 748



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/473 (28%), Positives = 238/473 (50%), Gaps = 23/473 (4%)

Query: 74  TAMTIHCQVLKKGNCL-DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGY 132
           TA  +H   L+ G    D FA+  L++ Y++  R+ DA + FDEM  R+  ++   + G 
Sbjct: 86  TAAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGL 145

Query: 133 TVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNA 192
             +++  EAVGLF  +  EG   +    ++ L + V +G   L   +     K G D   
Sbjct: 146 CRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDEL 205

Query: 193 FVGTALIDAFSVCGCVEFARKVFDGL-------FNDCFE---------EALNFFSQMRAV 236
           FV  A+ID +   G +E  RKVFDG+       +N              A+  F  MR  
Sbjct: 206 FVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDS 265

Query: 237 GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM-DLYVAVALLDLYTKSGEISN 295
           G  P+  T   +  A      I   +S H   ++  +++ D+    A++D+Y K  +I  
Sbjct: 266 GVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEA 325

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQACA 354
           A+R+F+ MP +D + W+ +I  Y Q  L+ +A+ ++  M +   + P Q TFVSVL A +
Sbjct: 326 AQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYS 385

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
            +  L  G ++H+L ++ GL  DV+V   ++D+YAKCG+++ ++ LF ++P+R+   WN 
Sbjct: 386 HLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNA 445

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
           +I G    G   KA+ +FS+M +E +    VT+ S+L AC+    ++ G     +   A 
Sbjct: 446 VISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTA- 504

Query: 475 YDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHG 524
           Y +  +  +   ++DM+ + G + DA   + +M    +   W A++    +HG
Sbjct: 505 YGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHG 557



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/395 (24%), Positives = 184/395 (46%), Gaps = 29/395 (7%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           + ++ L  C+   D   A+ +H   +K G   +LF  N +++VY KL  L +  K+FD M
Sbjct: 172 TVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGM 231

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
             R+ +++ + I G+    Q   AV +F  +   G   +     +    +   G  ++C 
Sbjct: 232 SSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCG--DICG 289

Query: 178 --CVFACVYKLGHD-SNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
              V   + + G D  +   G A++D ++    +E A+++FD +                
Sbjct: 290 GRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYM 349

Query: 220 -NDCFEEALNFFSQM-RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
            N    EA++ +  M +  G KP   TF  VL A   L  ++     H  ++KT   +D+
Sbjct: 350 QNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDV 409

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
           YV   ++DLY K G++  A  +FE+ P++   PW+ +I+          A+ LF +M+Q 
Sbjct: 410 YVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQE 469

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALM-DVYAKCGRMEN 396
            ++P+  TFVS+L AC+    +D G    +++     +  +    A M D++ + G++++
Sbjct: 470 GISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDD 529

Query: 397 SVELFAESP-KRNHVTWNTM-----IVGYVQLGEV 425
           + +     P K +   W  +     I G V++G+V
Sbjct: 530 AFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKV 564


>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 900

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 252/674 (37%), Positives = 380/674 (56%), Gaps = 29/674 (4%)

Query: 160 FTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL- 218
           FT+ LK+  +         V A +   G    A   TAL + ++ C     AR+VFD + 
Sbjct: 228 FTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRMP 287

Query: 219 ---------------FNDCFEEALNFFSQMRAV-GFKPNNFTFAFVLKACLGLDTIRVAK 262
                           N   E A+    +M+   G +P+  T   VL AC     +   +
Sbjct: 288 ARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACR 347

Query: 263 SAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTD 322
             H  A++  ++  + V+ A+LD+Y K G + +AR++F+ M  ++ + W+ MI  YA+  
Sbjct: 348 EVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENG 407

Query: 323 LSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSN 382
            + +A+ LF RM    V     + ++ L AC  +  LD G ++H L+VR+GL S+V V N
Sbjct: 408 DATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMN 467

Query: 383 ALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPA 442
           AL+ +Y KC R + + ++F E   +  V+WN MI+G  Q G    A+ +FS+M  E V  
Sbjct: 468 ALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKP 527

Query: 443 TEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVF 502
              T  S++ A A ++       +H  +++ + D DV V  ALIDMYAKCG ++ AR +F
Sbjct: 528 DSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLF 587

Query: 503 DMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLE 562
           +   D + ++WNAMI GY  HG     +++F+ M+  G  PN  TF+ VLSACS+ GL++
Sbjct: 588 NSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVD 647

Query: 563 QGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           +G+ YF SM  +YG+EP +EHY +MV LLGRAG L +A   I+ +P +P + ++ A+LGA
Sbjct: 648 EGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGA 707

Query: 623 CIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEP 671
           C +H NVE+   SAQ I + EPE+   HVLL+NIYA A  W           +K   K P
Sbjct: 708 CKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYANASLWKDVARVRTAMEKKGLQKTP 767

Query: 672 GLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKE 731
           G S ++ +  +H F +G T+H     I   L  L  + +  GY+PD  ++  DV +D K 
Sbjct: 768 GWSIVQLKNEIHTFYSGSTNHQQAKDIYARLAKLIEEIKAVGYVPDTDSI-HDVEDDVKA 826

Query: 732 RYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRF 791
           + L  HSEKLA+A+ L +  P + I+I KNLR+C DCH A K+IS +  REII+RD+ RF
Sbjct: 827 QLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCKDCHNATKLISLVTGREIIMRDIQRF 886

Query: 792 HHFQDGCCSCGDFW 805
           HHF+DG CSCGD+W
Sbjct: 887 HHFKDGKCSCGDYW 900



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 117/334 (35%), Positives = 181/334 (54%), Gaps = 2/334 (0%)

Query: 226 ALNFFSQMR-AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           AL  F+ M  A G  P   TF  +LK C     +   ++ H          +   A AL 
Sbjct: 208 ALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALA 267

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA-FVAPNQ 343
           ++Y K     +ARR+F+ MP +D + W+ ++A YA+  L+  AV +  RM++     P+ 
Sbjct: 268 NMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDA 327

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
            T VSVL ACA  + L    ++H+  VR G    V VS A++DVY KCG ++++ ++F  
Sbjct: 328 VTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDG 387

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
              RN V+WN MI GY + G+  +A+ +F +M+ E V  T+V+  + L AC  L  L+ G
Sbjct: 388 MQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEG 447

Query: 464 MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMH 523
            +VH L V+   + +V V NALI MY KC     A  VFD +     VSWNAMI G + +
Sbjct: 448 RRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQN 507

Query: 524 GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSN 557
           G S + +++F  MQ    +P++ T V ++ A ++
Sbjct: 508 GSSEDAVRLFSRMQLENVKPDSFTLVSIIPALAD 541



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 150/524 (28%), Positives = 244/524 (46%), Gaps = 35/524 (6%)

Query: 22  NAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQ 81
           +A LR  ++++ L     + +  +P + S     +  + + L+ C    DL T   +H Q
Sbjct: 193 HARLRAAASRSDLRGALAAFAAMSPASGSGPVLRT--FTSLLKLCAARADLATGRAVHAQ 250

Query: 82  VLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEA 141
           +  +G   +  A   L N+Y K  R  DA ++FD MP R+ +++   + GY  +     A
Sbjct: 251 LAARGLSPEALAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAA 310

Query: 142 VGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE---LCPCVFACVYKLGHDSNAFVGTAL 198
           VG+   +  E  E  P A T  + VL +   A+    C  V A   + G D    V TA+
Sbjct: 311 VGMVVRMQEEDGE-RPDAVT-LVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAI 368

Query: 199 IDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNN 242
           +D +  CG V+ ARKVFDG+                 N    EAL  F +M   G    +
Sbjct: 369 LDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTD 428

Query: 243 FTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEE 302
            +    L AC  L  +   +  H   ++   E ++ V  AL+ +Y K      A ++F+E
Sbjct: 429 VSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDE 488

Query: 303 MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG 362
           +  K  + W+ MI    Q   S DAV LF RM+   V P+ FT VS++ A A +      
Sbjct: 489 LGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQA 548

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
             IH   +R+ L  DV+V  AL+D+YAKCGR+  +  LF  +  R+ +TWN MI GY   
Sbjct: 549 RWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSH 608

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
           G    A+ +F +M        E T+ SVL AC+    ++ G Q +  ++K +Y ++  + 
Sbjct: 609 GSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEG-QEYFSSMKEDYGLEPGME 667

Query: 483 N--ALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
           +   ++D+  + G + +A         W+ +    M  G S++G
Sbjct: 668 HYGTMVDLLGRAGKLHEA---------WSFIQKMPMEPGISVYG 702



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/324 (31%), Positives = 168/324 (51%), Gaps = 8/324 (2%)

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
            P   TF S+L+ CA    L  G  +H+ +   GL  +   + AL ++YAKC R  ++  
Sbjct: 222 GPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARR 281

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATE-VTYSSVLRACASLA 458
           +F   P R+ V WN ++ GY + G    A+ M  +M EE     + VT  SVL ACA   
Sbjct: 282 VFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQ 341

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           AL    +VH   V+  +D  V V+ A++D+Y KCG++  AR VFD M D N VSWNAMI 
Sbjct: 342 ALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIK 401

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           GY+ +G + E L +F  M   G    +++ +  L AC   G L++G    + +V   G+E
Sbjct: 402 GYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLV-RIGLE 460

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE--IGRLSA 636
             +    +++++  +    D AA++ + + ++  V  W A++  C  + + E  +   S 
Sbjct: 461 SNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVS-WNAMILGCTQNGSSEDAVRLFSR 519

Query: 637 QHILDFEPEDEATHVLLSNIYAMA 660
             + + +P+   +  L+S I A+A
Sbjct: 520 MQLENVKPD---SFTLVSIIPALA 540



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 101/377 (26%), Positives = 175/377 (46%), Gaps = 17/377 (4%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L +C     L     +H   ++ G    +  +  +L+VY K   +  A K+FD M +RN+
Sbjct: 334 LPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNS 393

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +S+   I+GY  +    EA+ LF  +  EG ++   +  A L     +G+ +    V   
Sbjct: 394 VSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHEL 453

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEA 226
           + ++G +SN  V  ALI  +  C   + A +VFD L                 N   E+A
Sbjct: 454 LVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDA 513

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           +  FS+M+    KP++FT   ++ A   +     A+  HG +++   + D+YV  AL+D+
Sbjct: 514 VRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDM 573

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y K G +S AR +F     + VI W+ MI  Y        AVELF  M+ +   PN+ TF
Sbjct: 574 YAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTF 633

Query: 347 VSVLQACATMEGLDLGNQ-IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           +SVL AC+    +D G +   S+    GL   +     ++D+  + G++  +     + P
Sbjct: 634 LSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMP 693

Query: 406 KRNHVTWNTMIVGYVQL 422
               ++    ++G  +L
Sbjct: 694 MEPGISVYGAMLGACKL 710


>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
 gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
          Length = 787

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 261/781 (33%), Positives = 427/781 (54%), Gaps = 30/781 (3%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
           F+S ++   L++C   +D+     IH  ++K G    +F  N L+++Y K N +  A KL
Sbjct: 8   FDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKL 67

Query: 114 FDEMPERN-TISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           FD M ERN  +S+ + I  Y+++ Q +EA+GLF  + + G   N +   A L+      +
Sbjct: 68  FDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSF 127

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------------- 218
            +L   + A + K     + +V  AL+      G + +A ++FD L              
Sbjct: 128 KKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAG 187

Query: 219 --FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
              N  + EAL FF  ++    KP+  +   +L A   L  +   K  H  A+K   + +
Sbjct: 188 FTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSN 247

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           L +   L+D+Y+K   ++ A  +F++M  KD+I W+ +IA YAQ +   +A++L  +++ 
Sbjct: 248 LRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQT 307

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             +  +     S L AC+ +  L    ++H   ++ GL SD+ + N ++DVYA CG +  
Sbjct: 308 KGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGL-SDLMMQNMIIDVYADCGNINY 366

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           +  +F     ++ V+W +MI  YV  G   +A+ +F  M E  V    +T  S+L A AS
Sbjct: 367 ATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAAS 426

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           L+AL  G ++H    +  + ++    N+L+DMYA CGS+ +A  VF      + V W  M
Sbjct: 427 LSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTM 486

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           I+ Y MHG     +++F +M+ +   P+++TF+ +L ACS+ GL+ +G+   ++M   Y 
Sbjct: 487 INAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQ 546

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
           +EP  EHY  +V LLGRA HL++A   ++ +  +P+  +W A LGAC IH+N ++G ++A
Sbjct: 547 LEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSNKKLGEIAA 606

Query: 637 QHILDFEPEDEATHVLLSNIYAMARSWEK-----------AASKEPGLSWIENQGMVHYF 685
           Q +LD +P+   ++VL+SN++A +  W+               K PG SWIE    VH F
Sbjct: 607 QKLLDLDPDSPGSYVLISNVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWIEVGNKVHTF 666

Query: 686 RAGDTSHADMNIIRGMLEWLNMK-SRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALA 744
              D SH +   I   L  +  K  ++ GY+P    VL +V ++EK + L+ HSE+LA+A
Sbjct: 667 LVRDKSHPESYKIYQKLAQITEKLEKEGGYVPQTKLVLHNVGKEEKVQMLYGHSERLAIA 726

Query: 745 FALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
           + L      +PIRI KNLR+CVDCHT  K++SK  +RE+I+RD  RFHHF+DG CSCGDF
Sbjct: 727 YGLMSTSEGTPIRITKNLRVCVDCHTFCKLVSKFFERELIVRDASRFHHFEDGVCSCGDF 786

Query: 805 W 805
           W
Sbjct: 787 W 787



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 217/401 (54%), Gaps = 11/401 (2%)

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           MR +G   ++FTF  VLKAC  ++ I      HG  +K  Y+  ++VA +L+ +Y K  +
Sbjct: 1   MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60

Query: 293 ISNARRIFEEMPKK-DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQ 351
           I  AR++F+ M ++ DV+ W+ +I+ Y+     ++A+ LF  M++A V  N +T V+ LQ
Sbjct: 61  ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQ 120

Query: 352 ACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
           AC       LG +IH+ +++   + DV+V+NAL+ ++ + G+M  +  +F E  +++++T
Sbjct: 121 ACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNIT 180

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
           WN+MI G+ Q G   +A+  F  + +  +   EV+  S+L A   L  L  G ++H   +
Sbjct: 181 WNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAM 240

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
           K   D ++ + N LIDMY+KC  +  A LVFD M + + +SW  +I+ Y+ +    E LK
Sbjct: 241 KNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALK 300

Query: 532 VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY---TSMV 588
           +   +Q +G   + +     L ACS    L   +      V  Y ++  +        ++
Sbjct: 301 LLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKE-----VHGYTLKRGLSDLMMQNMII 355

Query: 589 SLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNV 629
            +    G+++ A ++ E I  +  V+ W +++ +C +HN +
Sbjct: 356 DVYADCGNINYATRMFESIKCK-DVVSWTSMI-SCYVHNGL 394


>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 821

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 272/757 (35%), Positives = 403/757 (53%), Gaps = 28/757 (3%)

Query: 77  TIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSS 136
           +IH Q++K     + F    L+ VY  L  L  A  +FD+     T      I G+  + 
Sbjct: 65  SIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRNQ 124

Query: 137 QFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGT 196
           Q +E   LF  +     E+N +     LK    +   E+   +     + G   + +VG+
Sbjct: 125 QHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGS 184

Query: 197 ALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKP 240
           ++++     G +  A+KVFDG+                    F E++  F +M   G +P
Sbjct: 185 SMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRP 244

Query: 241 NNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIF 300
           +  T A +LKAC      +V   AH   L      D++V  +L+D+Y+  G+  +A  +F
Sbjct: 245 SPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVF 304

Query: 301 EEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLD 360
           + M  + +I W+ MI+ Y Q  +  ++  LF R+ Q+    +  T VS+++ C+    L+
Sbjct: 305 DSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLE 364

Query: 361 LGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYV 420
            G  +HS ++R  L S + +S A++D+Y+KCG ++ +  +F    K+N +TW  M+VG  
Sbjct: 365 NGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLS 424

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV 480
           Q G    A+ +F +M EE+V A  VT  S++  CA L +L  G  VH   ++  Y  D V
Sbjct: 425 QNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAV 484

Query: 481 VANALIDMYAKCGSITDARLVFDMMNDWNEVSW-NAMISGYSMHGLSAEVLKVFDLMQQR 539
           + +ALIDMYAKCG I  A  +F+      +V   N+MI GY MHG     L V+  M + 
Sbjct: 485 ITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEE 544

Query: 540 GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDK 599
             +PN  TFV +L+ACS+ GL+E+G+A F SM  ++ + P  +HY  +V L  RAG L++
Sbjct: 545 RLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEE 604

Query: 600 AAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAM 659
           A +L++ +PFQPS  +  ALL  C  H N  +G   A  ++  +  +   +V+LSNIYA 
Sbjct: 605 ADELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYLNSGIYVMLSNIYAE 664

Query: 660 ARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMK 708
           AR WE           +   K PG S IE    V+ F A D SH     I  +LE L ++
Sbjct: 665 ARKWESVNYIRGLMRMQGMKKIPGYSLIEVGNKVYTFFASDDSHPSWADIYQLLENLRLE 724

Query: 709 SRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDC 768
               GYIPD S VLRDV E  K + LW HSE+LA+AF L   P  S I+I KNLR+CVDC
Sbjct: 725 VEAEGYIPDTSCVLRDVNEPMKVKLLWGHSERLAIAFGLLSTPCGSLIKITKNLRVCVDC 784

Query: 769 HTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           H   K ISKIVQREII+RD +RFHHF +G CSC DFW
Sbjct: 785 HNVTKYISKIVQREIIVRDANRFHHFVNGKCSCNDFW 821



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 139/493 (28%), Positives = 245/493 (49%), Gaps = 25/493 (5%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E NS++   +L++C    D +  M I    +++G  L L+  + ++N  VK   L DA K
Sbjct: 142 EINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQK 201

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +FD MPE++ + + + I GY     F E++ +F  +   G   +P      LK     G 
Sbjct: 202 VFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGL 261

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------------- 219
            ++  C  + V  LG  ++ FV T+L+D +S  G    A  VFD +              
Sbjct: 262 KKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISG 321

Query: 220 ---NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
              N    E+   F ++   G   ++ T   +++ C     +   +  H C ++   E  
Sbjct: 322 YVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESH 381

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           L ++ A++D+Y+K G I  A  +F  M KK+VI W+ M+   +Q   + DA++LFC+M++
Sbjct: 382 LVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQE 441

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             VA N  T VS++  CA +  L  G  +H+  +R G   D  +++AL+D+YAKCG++ +
Sbjct: 442 EKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHS 501

Query: 397 SVELF-AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
           + +LF  E   ++ +  N+MI+GY   G    A+ ++S+M+EE++   + T+ S+L AC+
Sbjct: 502 AEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACS 561

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANA----LIDMYAKCGSITDA-RLVFDMMNDWNE 510
               +E G     L      D DV   +     L+D++++ G + +A  LV  M    + 
Sbjct: 562 HSGLVEEG---KALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPST 618

Query: 511 VSWNAMISGYSMH 523
               A++SG   H
Sbjct: 619 DVLEALLSGCRTH 631



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 185/365 (50%), Gaps = 2/365 (0%)

Query: 256 DTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMI 315
           +T+   KS H   +K     + ++A  L+ +Y+  G + +AR +F++    +    + MI
Sbjct: 58  NTLIHVKSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMI 117

Query: 316 ARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLL 375
           A + +    ++   LF  M    +  N +T +  L+AC  +   ++G +I    VR G  
Sbjct: 118 AGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFH 177

Query: 376 SDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKM 435
             ++V +++++   K G + ++ ++F   P+++ V WN++I GYVQ G   +++ MF +M
Sbjct: 178 LHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEM 237

Query: 436 LEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSI 495
           +   +  + VT +++L+AC      + GM  H   +      DV V  +L+DMY+  G  
Sbjct: 238 IGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDT 297

Query: 496 TDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSAC 555
             A LVFD M   + +SWNAMISGY  +G+  E   +F  + Q G   ++ T V ++  C
Sbjct: 298 GSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGC 357

Query: 556 SNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMI 615
           S    LE G     S +    +E  +   T++V +  + G + K A ++ G   + +V+ 
Sbjct: 358 SQTSDLENGRI-LHSCIIRKELESHLVLSTAIVDMYSKCGAI-KQATIVFGRMGKKNVIT 415

Query: 616 WRALL 620
           W A+L
Sbjct: 416 WTAML 420



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 120/278 (43%), Gaps = 28/278 (10%)

Query: 50  SVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD 109
           S S F+S +  + ++ C Q  DL+    +H  +++K     L  +  ++++Y K   +  
Sbjct: 341 SGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQ 400

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           AT +F  M ++N I++   + G + +    +A+ LF  +  E    N     + +     
Sbjct: 401 ATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAH 460

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN--DCF---- 223
           +G       V A   + G+  +A + +ALID ++ CG +  A K+F+  F+  D      
Sbjct: 461 LGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNS 520

Query: 224 -----------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC 272
                        AL  +S+M     KPN  TF  +L AC     +   K     AL   
Sbjct: 521 MIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGK-----ALFHS 575

Query: 273 YEMDLYVA------VALLDLYTKSGEISNARRIFEEMP 304
            E D  V         L+DL++++G +  A  + ++MP
Sbjct: 576 MERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMP 613


>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
           protein [Oryza sativa Japonica Group]
 gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 751

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 267/777 (34%), Positives = 401/777 (51%), Gaps = 96/777 (12%)

Query: 72  LQTAMTIHCQVLKKG-NCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQ 130
           ++ A  +HC +LK        F  N LL  Y K  RL  A ++FDEMP+ N  +    + 
Sbjct: 28  VRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLS 87

Query: 131 GYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDS 190
               S    +   LF+++                                        + 
Sbjct: 88  ALAHSRLVPDMERLFASMP---------------------------------------ER 108

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLK 250
           +A    ALI  FS  G    + +++  L              +R    +P   T + ++ 
Sbjct: 109 DAVSYNALITGFSSTGSPARSVQLYRAL--------------LREESVRPTRITLSAMIM 154

Query: 251 ACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK---- 306
               L    +  S H   L+  +    +V   L+D+Y K G I +ARR+F+EM  K    
Sbjct: 155 VASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVM 214

Query: 307 ---------------------------DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
                                      D I W+ M+    Q  L ++A+++F RMR   V
Sbjct: 215 YNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGV 274

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
             +Q+TF S+L AC  +  L+ G QIH+ + R     +VFV +AL+D+Y+KC  +  +  
Sbjct: 275 GIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEA 334

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +F     RN ++W  MIVGY Q     +A+  FS+M  + +   + T  SV+ +CA+LA+
Sbjct: 335 VFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLAS 394

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
           LE G Q HCL + +     + V+NAL+ +Y KCGSI DA  +FD M+  ++VSW A+++G
Sbjct: 395 LEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTG 454

Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
           Y+  G + E + +F+ M   G +P+ +TF+GVLSACS  GL+E+G  YF SM  ++GI P
Sbjct: 455 YAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVP 514

Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHI 639
             +HYT M+ L  R+G   +A + I+ +P  P    W  LL +C +  N+EIG+ +A+++
Sbjct: 515 IDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENL 574

Query: 640 LDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAG 688
           L+ +P++ A++VLL +++A    W + A            KEPG SWI+ +  VH F A 
Sbjct: 575 LETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSAD 634

Query: 689 DTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALF 748
           D SH   + I   LEWLN K  + GY PD+S+VL DV + +K   +  HSEKLA+AF L 
Sbjct: 635 DQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLI 694

Query: 749 KMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            +P   PIRI+KNLR+CVDCH A K ISKI  R+I++RD  RFH F DG CSCGDFW
Sbjct: 695 FVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 207/431 (48%), Gaps = 66/431 (15%)

Query: 254 GLDTIRVAKSAHGCALKTCYEMD-LYVAVALLDLYTKSGEISNARRIFEE---------- 302
           G   +RVA + H   LKT  +    ++   LL  Y KSG ++ ARR+F+E          
Sbjct: 24  GRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRN 83

Query: 303 ---------------------MPKKDVIPWSFMIARYAQTDLSIDAVELF-CRMRQAFVA 340
                                MP++D + ++ +I  ++ T     +V+L+   +R+  V 
Sbjct: 84  ALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVR 143

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           P + T  +++   + +    LG+ +H  V+R+G  +  FV + L+D+YAK G + ++  +
Sbjct: 144 PTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRV 203

Query: 401 FAESP-------------------------------KRNHVTWNTMIVGYVQLGEVGKAM 429
           F E                                  R+ +TW TM+ G  Q G   +A+
Sbjct: 204 FQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEAL 263

Query: 430 IMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMY 489
            +F +M  E V   + T+ S+L AC +LAALE G Q+H    +  Y+ +V V +AL+DMY
Sbjct: 264 DVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMY 323

Query: 490 AKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFV 549
           +KC SI  A  VF  M   N +SW AMI GY  +  S E ++ F  MQ  G +P++ T  
Sbjct: 324 SKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLG 383

Query: 550 GVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF 609
            V+S+C+N   LE+G A F  +    G+   I    ++V+L G+ G ++ A +L + + F
Sbjct: 384 SVISSCANLASLEEG-AQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSF 442

Query: 610 QPSVMIWRALL 620
              V  W AL+
Sbjct: 443 HDQVS-WTALV 452



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 118/285 (41%), Gaps = 28/285 (9%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           + +++ + L +C     L+    IH  + +     ++F  + L+++Y K   +  A  +F
Sbjct: 277 DQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVF 336

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             M  RN IS+   I GY  ++   EAV  FS +  +G + + F   + +    ++   E
Sbjct: 337 RRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLE 396

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-FNDCF---------- 223
                       G      V  AL+  +  CG +E A ++FD + F+D            
Sbjct: 397 EGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYA 456

Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                +E ++ F +M A G KP+  TF  VL AC      R      GC      + D  
Sbjct: 457 QFGKAKETIDLFEKMLANGLKPDGVTFIGVLSAC-----SRAGLVEKGCDYFDSMQKDHG 511

Query: 279 VA------VALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
           +         ++DLY++SG    A    ++MP   D   W+ +++
Sbjct: 512 IVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLS 556



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 81/209 (38%), Gaps = 17/209 (8%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           + SC     L+     HC  L  G    +  +N L+ +Y K   + DA +LFDEM   + 
Sbjct: 386 ISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQ 445

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +S+   + GY    +  E + LF  +   G + +   F   L      G  E     F  
Sbjct: 446 VSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDS 505

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNN 242
           + K  H      G   ID    C    ++R       +  F+EA  F  QM      P+ 
Sbjct: 506 MQK-DH------GIVPIDDHYTCMIDLYSR-------SGRFKEAEEFIKQM---PHSPDA 548

Query: 243 FTFAFVLKACLGLDTIRVAKSAHGCALKT 271
           F +A +L +C     + + K A    L+T
Sbjct: 549 FGWATLLSSCRLRGNMEIGKWAAENLLET 577


>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 701

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 250/645 (38%), Positives = 373/645 (57%), Gaps = 30/645 (4%)

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMR 234
           N ++ T L   ++VCG + +A+ +FD +                 N+    AL  + +M 
Sbjct: 57  NTYLATKLAACYAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKML 116

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
             G KP+NFT+ FVLKAC  L    + +  H   +    E D+YV  ++L +Y K G++ 
Sbjct: 117 HFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVE 176

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
            AR +F+ M  +D+  W+ M++ + +   +  A E+F  MR+     ++ T +++L AC 
Sbjct: 177 AARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACG 236

Query: 355 TMEGLDLGNQIHSLVVR---VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
            +  L +G +IH  VVR    G + + F+ N+++D+Y  C  +  + +LF     ++ V+
Sbjct: 237 DVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVS 296

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
           WN++I GY + G+  +A+ +F +M+       EVT  SVL AC  ++AL  G  V    V
Sbjct: 297 WNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVV 356

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
           K  Y ++VVV  ALI MYA CGS+  A  VFD M + N  +   M++G+ +HG   E + 
Sbjct: 357 KRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAIS 416

Query: 532 VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLL 591
           +F  M  +G  P+   F  VLSACS+ GL+++G+  F  M  +Y +EP   HY+ +V LL
Sbjct: 417 IFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLL 476

Query: 592 GRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHV 651
           GRAG+LD+A  +IE +  +P+  +W ALL AC +H NV++  +SAQ + +  P+  + +V
Sbjct: 477 GRAGYLDEAYAVIENMKLKPNEDVWTALLSACRLHRNVKLAVISAQKLFELNPDGVSGYV 536

Query: 652 LLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRG 700
            LSNIYA  R WE           +   K P  S++E   MVH F  GDTSH   + I  
Sbjct: 537 CLSNIYAAERRWEDVENVRALVAKRRLRKPPSYSFVELNKMVHQFFVGDTSHEQSDDIYA 596

Query: 701 MLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIK 760
            L+ LN + +KAGY PD S VL DV E+ KE+ LW HSE+LALAFAL    P + IRI K
Sbjct: 597 KLKDLNEQLKKAGYKPDTSLVLYDVEEEIKEKMLWDHSERLALAFALINTGPGTTIRITK 656

Query: 761 NLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           NLR+C DCHT IK+ISK+  REII+RD+ RFHHF+DG CSCG +W
Sbjct: 657 NLRVCGDCHTVIKMISKLTNREIIMRDICRFHHFRDGLCSCGGYW 701



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 133/506 (26%), Positives = 237/506 (46%), Gaps = 22/506 (4%)

Query: 40  SNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCL-DLFATNVLL 98
           + +T  P   S S F+S    T LQS   +  L  A+ +H  V   G    + +    L 
Sbjct: 6   TTATLIPKPSSTSTFDSLQCGTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLA 65

Query: 99  NVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPF 158
             Y     +P A  +FD++  +N+  + + I+GY  ++    A+ L+  +   G + + F
Sbjct: 66  ACYAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNF 125

Query: 159 AFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL 218
            +   LK    +   E+   V A V   G + + +VG +++  +   G VE AR VFD +
Sbjct: 126 TYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRM 185

Query: 219 F----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAK 262
                            N     A   F  MR  GF  +  T   +L AC  +  ++V K
Sbjct: 186 LVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGK 245

Query: 263 SAHGCALKTCYEMDL---YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYA 319
             HG  ++      +   ++  +++D+Y     +S AR++FE +  KDV+ W+ +I+ Y 
Sbjct: 246 EIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYE 305

Query: 320 QTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVF 379
           +   +  A+ELF RM      P++ T +SVL AC  +  L LG  + S VV+ G + +V 
Sbjct: 306 KCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVV 365

Query: 380 VSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ 439
           V  AL+ +YA CG +  +  +F E P++N      M+ G+   G   +A+ +F +ML + 
Sbjct: 366 VGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKG 425

Query: 440 VPATEVTYSSVLRACASLAALEPGMQV-HCLTVKANYDMDVVVANALIDMYAKCGSITDA 498
           V   E  +++VL AC+    ++ G ++ + +T   + +      + L+D+  + G + +A
Sbjct: 426 VTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEA 485

Query: 499 RLVFDMMN-DWNEVSWNAMISGYSMH 523
             V + M    NE  W A++S   +H
Sbjct: 486 YAVIENMKLKPNEDVWTALLSACRLH 511



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 135/276 (48%), Gaps = 4/276 (1%)

Query: 348 SVLQACATMEGLDLGNQIHSLVVRVGLLS-DVFVSNALMDVYAKCGRMENSVELFAESPK 406
           ++LQ+    + L    Q+H+ V   G L  + +++  L   YA CG M  +  +F +   
Sbjct: 27  TLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVL 86

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
           +N   WN+MI GY       +A+ ++ KML         TY  VL+AC  L   E G +V
Sbjct: 87  KNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKV 146

Query: 467 HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLS 526
           H L V    + DV V N+++ MY K G +  AR+VFD M   +  SWN M+SG+  +G +
Sbjct: 147 HALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEA 206

Query: 527 AEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY-- 584
               +VF  M++ G+  +  T + +LSAC +   L+ G+     +V N         +  
Sbjct: 207 RGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLM 266

Query: 585 TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
            S++ +      +  A KL EG+  +  V+ W +L+
Sbjct: 267 NSIIDMYCNCESVSCARKLFEGLRVK-DVVSWNSLI 301


>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 263/725 (36%), Positives = 407/725 (56%), Gaps = 38/725 (5%)

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
           MP+RN +S+ + I GYT    + E + LF         L+ F F+  L V        L 
Sbjct: 1   MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF------ 223
             + A +   G      +  +LID +  CG +++AR VF+         +N         
Sbjct: 61  RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120

Query: 224 ---EEALNFFSQMRAVGFKPNNFTFAFVLKACLG--LDTIRVAKSAHGCALKTCYEMDLY 278
              +E L    +M   G   N++     LKAC      +I   K  HGCA+K   ++D+ 
Sbjct: 121 GSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVV 180

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSID-----AVELFCR 333
           V  ALLD Y K G++ +A +IF+ MP  +V+ ++ MIA + Q +   D     A+ LF  
Sbjct: 181 VGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFE 240

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           M+   + P++FTF S+L+AC+T+E  + G QIH+ + +  L SD F+ NAL+++Y+  G 
Sbjct: 241 MQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGS 300

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           +E+ ++ F  +PK + V+W ++IVG+VQ G+    + +F ++L       E T S +L A
Sbjct: 301 IEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSA 360

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
           CA+LAA++ G Q+H   +K       ++ N+ I MYAKCG I  A + F    + + VSW
Sbjct: 361 CANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSW 420

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA 573
           + MIS  + HG + E + +F+LM+  G  PN++TF+GVL ACS+GGL+E+G  YF+ M  
Sbjct: 421 SVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKK 480

Query: 574 NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGR 633
           ++GI P ++H   +V LLGRAG L +A   I    F+   ++WR+LL AC +H   + G+
Sbjct: 481 DHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGK 540

Query: 634 LSAQHILDFEPEDEATHVLLSNIYAMA---------RSW--EKAASKEPGLSWIENQGMV 682
             A+ +++ EPE  A++VLL NIY  A         R+   ++   KEPGLSWIE   +V
Sbjct: 541 RVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVV 600

Query: 683 HYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWV--HSEK 740
           H F AGD SH +  +I   LE +  + +K  YI +   ++ D  E + +    V  HSEK
Sbjct: 601 HSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYIDE--KLVSDASEPKHKDNSMVSYHSEK 658

Query: 741 LALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCS 800
           LA+ F +  +P S+P+R++KNLR C  CH  +K+ S++  REII+RD  RFH F+DG CS
Sbjct: 659 LAVTFGIISLPRSAPVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRFHRFRDGSCS 718

Query: 801 CGDFW 805
           CGD+W
Sbjct: 719 CGDYW 723



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 128/496 (25%), Positives = 239/496 (48%), Gaps = 27/496 (5%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
            +  +++ +L  C +  DL+    IH  +   G    +  TN L+++Y K  R+  A  +
Sbjct: 39  LDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLV 98

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS--MG 171
           F+   E +++S+ + I GY       E + L   + R G  LN +A  + LK   S    
Sbjct: 99  FESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSS 158

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF---------------- 215
             E    +  C  KLG D +  VGTAL+D ++  G +E A K+F                
Sbjct: 159 SIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIA 218

Query: 216 -----DGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALK 270
                + + ++   EA+  F +M++ G KP+ FTF+ +LKAC  ++     K  H    K
Sbjct: 219 GFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFK 278

Query: 271 TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVEL 330
              + D ++  AL++LY+ SG I +  + F   PK DV+ W+ +I  + Q       + L
Sbjct: 279 YNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTL 338

Query: 331 FCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAK 390
           F  +  +   P++FT   +L ACA +  +  G QIH+  ++ G+ +   + N+ + +YAK
Sbjct: 339 FHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAK 398

Query: 391 CGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
           CG ++++   F E+   + V+W+ MI    Q G   +A+ +F  M    +    +T+  V
Sbjct: 399 CGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGV 458

Query: 451 LRACASLAALEPGMQVHCLTVKANYDMDVVVANA--LIDMYAKCGSITDAR-LVFDMMND 507
           L AC+    +E G++ +   +K ++ +   V ++  ++D+  + G + +A   + D   +
Sbjct: 459 LVACSHGGLVEEGLR-YFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFE 517

Query: 508 WNEVSWNAMISGYSMH 523
            + V W +++S   +H
Sbjct: 518 GDPVMWRSLLSACRVH 533



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/289 (22%), Positives = 118/289 (40%), Gaps = 33/289 (11%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           SEF   ++++ L++C   +  +    IH Q+ K     D F  N L+ +Y     + D  
Sbjct: 249 SEF---TFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGL 305

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
           K F   P+ + +S+ + I G+  + QF   + LF  L   G + + F  +  L    ++ 
Sbjct: 306 KCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLA 365

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN----------- 220
             +    + A   K G  +   +  + I  ++ CG ++ A   F    N           
Sbjct: 366 AVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMIS 425

Query: 221 -----DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL-------GLDTIRVAKSAHGCA 268
                 C +EA++ F  M+  G  PN+ TF  VL AC        GL    + K  HG  
Sbjct: 426 SNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGIT 485

Query: 269 LKTCYEMDLYVAVALLDLYTKSGEISNARR-IFEEMPKKDVIPWSFMIA 316
               +      +  ++DL  ++G ++ A   I +   + D + W  +++
Sbjct: 486 PNVKH------SACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLS 528


>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
 gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
          Length = 631

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 249/597 (41%), Positives = 347/597 (58%), Gaps = 12/597 (2%)

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           N  F  AL +FS+MR    KPN+FTF    KA   L      K  H  ALK     D +V
Sbjct: 36  NGYFSSALLYFSKMRRENIKPNDFTFPCAFKASTALCLPFAGKQIHAIALKLGQINDKFV 95

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
             +  D+Y+K+G    A+R+F+EMP ++V  W+  I+          A++ F   R+   
Sbjct: 96  GCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGG 155

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
            P+  TF + L ACA    LDLG Q+H LV+R G   DV V+N ++DVY KC  +E +  
Sbjct: 156 EPDLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEM 215

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +F    +RN V+W TM+    Q  E  KA ++F    +E +  T+   SSV+ A A ++ 
Sbjct: 216 VFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISG 275

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
           LE G  VH L VKA  + D+ V +AL+DMY KCGSI D   VF  M + N VSWNAMISG
Sbjct: 276 LEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISG 335

Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
           Y+  G     + +F+ MQ      N +T + VLSACS GG ++ G   F+SM   Y IEP
Sbjct: 336 YAHQGDVDMAMTLFEEMQSEAV-ANYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEP 394

Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHI 639
             EHY  +  +LGRAG +++A + ++ +P +P++ +W ALL AC ++   E+G+++A ++
Sbjct: 395 GAEHYACIADMLGRAGMVERAYEFVQKMPIRPTISVWGALLNACRVYGEPELGKIAADNL 454

Query: 640 LDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAG 688
              +P+D   HVLLSN++A A  W++A             K  G SW+  +  VH F+A 
Sbjct: 455 FKLDPKDSGNHVLLSNMFAAAGRWDEATLVRKEMKDVGIKKGAGCSWVTAKNKVHVFQAK 514

Query: 689 DTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALF 748
           DTSH   + I+ ML  L  + + AGY+PD +  L D+ E+EK   +  HSEK+ALAF L 
Sbjct: 515 DTSHERNSEIQAMLVKLRTEMQAAGYMPDTNYALYDLEEEEKMTEVGYHSEKIALAFGLI 574

Query: 749 KMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            +PP  PIRI KNLRIC DCH+A K IS IV REII+RD +RFH F+D  CSC DFW
Sbjct: 575 ALPPGVPIRITKNLRICGDCHSAFKFISGIVGREIIVRDNNRFHRFRDSQCSCRDFW 631



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 218/445 (48%), Gaps = 23/445 (5%)

Query: 100 VYVKLNRLPDATKLFDEM-PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPF 158
           +Y KL+ LP+  +L  ++ P R  +++   I G   +  F  A+  FS + RE  + N F
Sbjct: 1   MYSKLD-LPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDF 59

Query: 159 AFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-- 216
            F    K   ++        + A   KLG  ++ FVG +  D +S  G    A+++FD  
Sbjct: 60  TFPCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEM 119

Query: 217 --------------GLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAK 262
                          + +    +A++ F + R VG +P+  TF   L AC     + + +
Sbjct: 120 PPRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGR 179

Query: 263 SAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTD 322
             HG  +++ +E D+ VA  ++D+Y K  E+  A  +F  M +++ + W  M+A   Q D
Sbjct: 180 QLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQND 239

Query: 323 LSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSN 382
               A  +F   R+  +    +   SV+ A A + GL+ G  +H+L V+  +  D+FV +
Sbjct: 240 EKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGS 299

Query: 383 ALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPA 442
           AL+D+Y KCG +E+  ++F E P+RN V+WN MI GY   G+V  AM +F +M  E V A
Sbjct: 300 ALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAV-A 358

Query: 443 TEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDARL 500
             VT   VL AC+   A++ G ++   +++  Y ++    +   + DM  + G +  A  
Sbjct: 359 NYVTLICVLSACSRGGAVKLGNEIF-ESMRDRYRIEPGAEHYACIADMLGRAGMVERAYE 417

Query: 501 VFDMMNDWNEVS-WNAMISGYSMHG 524
               M     +S W A+++   ++G
Sbjct: 418 FVQKMPIRPTISVWGALLNACRVYG 442



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 171/350 (48%), Gaps = 10/350 (2%)

Query: 286 LYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFT 345
           +Y+K    + A+ + +  P + V+ W+ +I+   Q      A+  F +MR+  + PN FT
Sbjct: 1   MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFT 60

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           F    +A   +     G QIH++ +++G ++D FV  +  D+Y+K G    +  LF E P
Sbjct: 61  FPCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMP 120

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
            RN   WN  I   V  G  GKA+  F +          +T+ + L ACA    L+ G Q
Sbjct: 121 PRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQ 180

Query: 466 VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGL 525
           +H L +++ ++ DV VAN +ID+Y KC  +  A +VF+ M   N VSW  M++    +  
Sbjct: 181 LHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDE 240

Query: 526 SAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEH-- 583
             +   VF + ++ G    +     V+SA +    LE G +     V    ++ C+E   
Sbjct: 241 KEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRS-----VHALAVKACVEGDI 295

Query: 584 --YTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEI 631
              +++V + G+ G ++   ++   +P + +++ W A++       +V++
Sbjct: 296 FVGSALVDMYGKCGSIEDCEQVFHEMP-ERNLVSWNAMISGYAHQGDVDM 344



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 171/372 (45%), Gaps = 26/372 (6%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           IH   LK G   D F      ++Y K     +A +LFDEMP RN   +   I    +  +
Sbjct: 80  IHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVLDGR 139

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
             +A+  F    R G E +   F AFL         +L   +   V + G + +  V   
Sbjct: 140 PGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVANG 199

Query: 198 LIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRAVGFKPN 241
           +ID +  C  VE A  VF+G+                 ND  E+A   F   R  G +  
Sbjct: 200 IIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIELT 259

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
           ++  + V+ A  G+  +   +S H  A+K C E D++V  AL+D+Y K G I +  ++F 
Sbjct: 260 DYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFH 319

Query: 302 EMPKKDVIPWSFMIARYA-QTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLD 360
           EMP+++++ W+ MI+ YA Q D+ + A+ LF  M+   VA N  T + VL AC+    + 
Sbjct: 320 EMPERNLVSWNAMISGYAHQGDVDM-AMTLFEEMQSEAVA-NYVTLICVLSACSRGGAVK 377

Query: 361 LGNQI-HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT-WNTM--- 415
           LGN+I  S+  R  +         + D+  + G +E + E   + P R  ++ W  +   
Sbjct: 378 LGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFVQKMPIRPTISVWGALLNA 437

Query: 416 --IVGYVQLGEV 425
             + G  +LG++
Sbjct: 438 CRVYGEPELGKI 449



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 117/257 (45%), Gaps = 10/257 (3%)

Query: 394 MENSVELFAE-SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLR 452
           + N  +L  + +P R  VTW  +I G VQ G    A++ FSKM  E +   + T+    +
Sbjct: 7   LPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFTFPCAFK 66

Query: 453 ACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS 512
           A  +L     G Q+H + +K     D  V  +  DMY+K G   +A+ +FD M   N   
Sbjct: 67  ASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAV 126

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
           WNA IS   + G   + +  F   ++ G  P+ +TF   L+AC++   L+ G      +V
Sbjct: 127 WNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQ-LHGLV 185

Query: 573 ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE-- 630
              G E  +     ++ + G+   ++ A  +  G+  + SV  W  ++ AC  ++  E  
Sbjct: 186 IRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVS-WCTMVAACEQNDEKEKA 244

Query: 631 -----IGRLSAQHILDF 642
                +GR     + D+
Sbjct: 245 CVVFLMGRKEGIELTDY 261



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/272 (20%), Positives = 113/272 (41%), Gaps = 24/272 (8%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           ++   L +C     L     +H  V++ G   D+   N +++VY K   +  A  +F+ M
Sbjct: 161 TFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGM 220

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
             RN++S+ T +     + +  +A  +F    +EG EL  +  ++ +     +   E   
Sbjct: 221 GRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGR 280

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FND 221
            V A   K   + + FVG+AL+D +  CG +E   +VF  +                   
Sbjct: 281 SVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQG 340

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL---- 277
             + A+  F +M++     N  T   VL AC     +++       +++  Y ++     
Sbjct: 341 DVDMAMTLFEEMQSEAV-ANYVTLICVLSACSRGGAVKLGNEIFE-SMRDRYRIEPGAEH 398

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
           Y  +A  D+  ++G +  A    ++MP +  I
Sbjct: 399 YACIA--DMLGRAGMVERAYEFVQKMPIRPTI 428


>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial [Vitis vinifera]
          Length = 623

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 242/594 (40%), Positives = 358/594 (60%), Gaps = 17/594 (2%)

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
              A+     M   G   +  T++ ++K C     ++  K  H       YE  ++V   
Sbjct: 36  LHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNT 95

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           LL++Y K   +  A  +F+EMP+++V+ W+ MI+ Y+   L+  A++    M +  V PN
Sbjct: 96  LLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNK-LNDKALKCLILMFREGVRPN 154

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
            FT+ SVL+AC   +GL    Q+H  +++ GL SDVFV +AL+DVY+K   ++N++ +F 
Sbjct: 155 MFTYSSVLRAC---DGLPNLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFD 211

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
           E P R+ V WN++I G+ Q  +  +A+ +F +M      A + T +SVLRAC  LA LE 
Sbjct: 212 EMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLEL 271

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G QVH   +K  +D D+++ NALIDMY KCGS+ DA   F  M + + +SW+ M++G + 
Sbjct: 272 GRQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQ 329

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
           +G S + L++F+ M++ G RPN +T +GVL ACS+ GL+E+G  YF+SM   +G++P  E
Sbjct: 330 NGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGRE 389

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDF 642
           HY  ++ LLGRAG LD+A KLI  +  +P  + WR LLGAC +H NV++   +A+ I++ 
Sbjct: 390 HYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIEL 449

Query: 643 EPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTS 691
           EPED  T++LLSNIYA  + WE  A            K PG SWIE    +H F  GDTS
Sbjct: 450 EPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVFILGDTS 509

Query: 692 HADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMP 751
           H  +  I   L  L  +    GY+PD + VL+D+  ++KE  L  HSEKLA+ F L  + 
Sbjct: 510 HPKIEEIVQRLNDLIERVMGVGYVPDTNFVLQDLEGEQKEDSLRYHSEKLAIMFGLMNLS 569

Query: 752 PSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
               +RI KNLRIC DCH   K++S++  R I+IRD  R+HHFQDG CSCGD+W
Sbjct: 570 REKTVRIRKNLRICGDCHVFAKVVSRMEHRSIVIRDPIRYHHFQDGVCSCGDYW 623



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 128/408 (31%), Positives = 198/408 (48%), Gaps = 25/408 (6%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +Y+  ++ C     +Q    +H  +  KG    +F  N LLN+YVK N L +A  LFDEM
Sbjct: 57  TYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEM 116

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
           PERN +S+ T I  Y+ +    +A+     + REG   N F +++ L+    +       
Sbjct: 117 PERNVVSWTTMISAYS-NKLNDKALKCLILMFREGVRPNMFTYSSVLRACDGLPNLRQLH 175

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--------------GLF--ND 221
           C    + K G +S+ FV +ALID +S    ++ A  VFD              G F  N 
Sbjct: 176 C---GIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNS 232

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
              EALN F +M+  GF  +  T   VL+AC GL  + + +  H   LK  ++ DL +  
Sbjct: 233 DGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK--FDQDLILNN 290

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           AL+D+Y K G + +A   F  M +KDVI WS M+A  AQ   S  A+ELF  M+++   P
Sbjct: 291 ALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRP 350

Query: 342 NQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           N  T + VL AC+    ++ G     S+    G+         L+D+  + GR++ +V+L
Sbjct: 351 NYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKL 410

Query: 401 FAESP-KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTY 447
             E   + + VTW T++ G  ++       I  +K + E  P    TY
Sbjct: 411 IHEMECEPDSVTWRTLL-GACRVHRNVDLAIYAAKKIIELEPEDAGTY 457



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 101/199 (50%), Gaps = 6/199 (3%)

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN 483
           ++ +AM     M    V A  +TYS +++ C++  A++ G +VH       Y+  + V N
Sbjct: 35  DLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVN 94

Query: 484 ALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRP 543
            L++MY K   + +A  +FD M + N VSW  MIS YS + L+ + LK   LM + G RP
Sbjct: 95  TLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYS-NKLNDKALKCLILMFREGVRP 153

Query: 544 NNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKL 603
           N  T+  VL AC     L Q        +   G+E  +   ++++ +  +   LD A  +
Sbjct: 154 NMFTYSSVLRACDGLPNLRQ----LHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGV 209

Query: 604 IEGIPFQPSVMIWRALLGA 622
            + +P +  +++W +++G 
Sbjct: 210 FDEMPTR-DLVVWNSIIGG 227


>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
 gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
          Length = 785

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 272/750 (36%), Positives = 404/750 (53%), Gaps = 42/750 (5%)

Query: 91  LFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHR 150
           LF  N LL  Y +L     A +L DEMP RN +SF   I  Y+       ++   +   R
Sbjct: 43  LFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARR 102

Query: 151 EGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEF 210
            G +++ F++ A L      G       V A     G  S  FV  +L+  +S CG +  
Sbjct: 103 AGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGE 162

Query: 211 ARKVFD---------------GLFN-DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLG 254
           AR+VFD               G       EE +  F+ MR  G   N+F    V+K C G
Sbjct: 163 ARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSG 222

Query: 255 LD--TIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWS 312
               T+ +A++ HGC +K   + D+++  A++D+Y K G +  A  +F  + + +V+ ++
Sbjct: 223 RGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFN 282

Query: 313 FMIARYAQTDLSI------DAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIH 366
            MIA + +T+  I      +A+ L+  ++   + P +FTF SVL+AC     L+ G QIH
Sbjct: 283 TMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIH 342

Query: 367 SLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVG 426
             V++     D F+ +AL+D+Y   G ME+    F  SPK + VTW  M+ G VQ     
Sbjct: 343 GQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHE 402

Query: 427 KAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALI 486
           KA+ +F + L   +     T SSV+ ACASLA    G Q+ C   K+ +D   V+ N+ +
Sbjct: 403 KALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCV 462

Query: 487 DMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNL 546
            MYA+ G +  A   F  M   + VSW+A+IS ++ HG + + L  FD M      PN +
Sbjct: 463 HMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEI 522

Query: 547 TFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEG 606
           TF+GVL+ACS+GGL+++G  Y+++M  +YG+ P I+H T +V LLGRAG L  A   I  
Sbjct: 523 TFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISN 582

Query: 607 IPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW--- 663
             F    +IWR+LL +C IH ++E G+L A  I++ EP   A++V+L N+Y  A      
Sbjct: 583 SIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLA 642

Query: 664 --------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYI 715
                   ++   KEPGLSWIE +  VH F AGD SH + + I   LE   M SR    I
Sbjct: 643 SKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLE--EMLSR----I 696

Query: 716 PDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKII 775
             L+    ++ + E+   +  HSEKLA+A  +  +P S+PIR++KNLR+C DCH+ +K+I
Sbjct: 697 EKLATTDTEISKREQN-LMNCHSEKLAVALGMIHLPQSAPIRVMKNLRVCRDCHSTMKLI 755

Query: 776 SKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           SK   REII+RD  RFHHF+DG CSC D+W
Sbjct: 756 SKSENREIILRDPIRFHHFRDGSCSCADYW 785



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 129/498 (25%), Positives = 244/498 (48%), Gaps = 28/498 (5%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           + +  SYA +L +C +   L+    +H   +  G    +F +N L+++Y K   + +A +
Sbjct: 106 DVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARR 165

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +FD   ER+ +S+ + + GY  +    E V +F+ + R G  LN FA  + +K     G 
Sbjct: 166 VFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGD 225

Query: 173 A--ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG-------LFN--- 220
              ++   V  CV K G DS+ F+ +A+ID ++  G +  A  +F         +FN   
Sbjct: 226 GTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMI 285

Query: 221 ------------DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCA 268
                       +   EAL  +S++++ G +P  FTF+ VL+AC     +   K  HG  
Sbjct: 286 AGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQV 345

Query: 269 LKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAV 328
           +K  ++ D ++  AL+DLY  SG + +  R F   PK D++ W+ M++   Q +L   A+
Sbjct: 346 IKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKAL 405

Query: 329 ELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVY 388
            LF     A + P+ FT  SV+ ACA++     G QI     + G      + N+ + +Y
Sbjct: 406 SLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMY 465

Query: 389 AKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYS 448
           A+ G ++ +   F E    + V+W+ +I  + Q G    A+  F +M++ +V   E+T+ 
Sbjct: 466 ARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFL 525

Query: 449 SVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDAR-LVFDMM 505
            VL AC+    ++ G++ +  T+  +Y +   + +   ++D+  + G + DA   + + +
Sbjct: 526 GVLTACSHGGLVDEGLRYY-ETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNSI 584

Query: 506 NDWNEVSWNAMISGYSMH 523
              + V W ++++   +H
Sbjct: 585 FHADPVIWRSLLASCRIH 602



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 4/159 (2%)

Query: 447 YSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN 506
           Y  +LRAC SL               A     + + N L+  Y + G    AR + D M 
Sbjct: 14  YLHLLRACTSLRHAAAVHAHIARAHPA---ASLFLRNTLLAAYCRLGGPLPARRLLDEMP 70

Query: 507 DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEA 566
             N VS+N +I  YS  GL+   L+     ++ G   +  ++   L+ACS  G L  G A
Sbjct: 71  RRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAALAACSRAGHLRAGRA 130

Query: 567 YFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
                + + G+   +    S+VS+  + G + +A ++ +
Sbjct: 131 VHALAILD-GLSSGVFVSNSLVSMYSKCGEMGEARRVFD 168


>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
 gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
 gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
          Length = 630

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 233/574 (40%), Positives = 347/574 (60%), Gaps = 11/574 (1%)

Query: 243 FTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEE 302
           FT   +L+ C    ++ V KS HG A+      D      L++LYTK G+   ARR+F+ 
Sbjct: 57  FTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFDA 116

Query: 303 MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG 362
           M  + +I W+ MIA Y      ++A++LF RM +      +FT  S L ACA    +   
Sbjct: 117 MSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIEC 176

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
            Q+H++ +++ L S  FV  A +DVYAKC  ++++  +F   P++  VTW+++  G+VQ 
Sbjct: 177 KQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQN 236

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
           G   + + +F     E +  TE T SS+L  CASLA +  G QVH + VK  +  ++ VA
Sbjct: 237 GLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVA 296

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
            +L+D+YAKCG I  +  VF  M + N V WNAMI+ +S H  S E + +F+ MQQ G  
Sbjct: 297 TSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIF 356

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           PN +T++ +LSACS+ GL+E+G  YF  ++++   EP + HY+ MV +LGR+G  D+A K
Sbjct: 357 PNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWK 416

Query: 603 LIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARS 662
           L++ +PF+P+  +W +LLG+  IH N+ + R++A+ +   EPE+   HVLLSN+YA + +
Sbjct: 417 LLDKMPFEPTASMWGSLLGSSRIHKNIRLARIAAEQLFRLEPENGGNHVLLSNVYAASGN 476

Query: 663 WEK-----------AASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRK 711
           WE             A KE G SWIE +G +H F AG+  H  +  +   LE +  + RK
Sbjct: 477 WENVVVARKYLRDSGAKKEMGRSWIEAKGKIHVFVAGEREHPGITDVYNKLEEIYHEMRK 536

Query: 712 AGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTA 771
             +  +    L DV  D+KE  L  HSEKLA AF L  +PP+ PI I KNLRIC DCH+ 
Sbjct: 537 ISHRANTQCDLHDVHADQKEELLKHHSEKLAFAFGLISLPPNIPITIYKNLRICGDCHSF 596

Query: 772 IKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +KI+S I +R++I+RD++RFHHF+DG CSCGDFW
Sbjct: 597 MKIVSCITERQVIVRDINRFHHFKDGSCSCGDFW 630



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 191/384 (49%), Gaps = 28/384 (7%)

Query: 198 LIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPN 241
           LI+ ++ CG  + AR+VFD +                 N    EAL  FS+M   G +  
Sbjct: 97  LINLYTKCGQNDCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMT 156

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
            FT +  L AC     I   K  H  A+K   +   +V  A LD+Y K   I +A  +FE
Sbjct: 157 EFTLSSTLCACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFE 216

Query: 302 EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL 361
            MP+K  + WS + A + Q  L  + + LF   ++  +   +FT  S+L  CA++  +  
Sbjct: 217 NMPEKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIE 276

Query: 362 GNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQ 421
           G Q+H+++V+ G   ++FV+ +L+DVYAKCG++E S E+FA+  ++N V WN MI  + +
Sbjct: 277 GTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSR 336

Query: 422 LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ-VHCLTVKANYDMDVV 480
                +AMI+F KM +  +   EVTY S+L AC+    +E G    + L      + +V+
Sbjct: 337 HAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVL 396

Query: 481 VANALIDMYAKCGSITDARLVFDMMNDWNEVS-WNAMISGYSMHG------LSAEVLKVF 533
             + ++D+  + G   +A  + D M      S W +++    +H       ++AE  ++F
Sbjct: 397 HYSCMVDVLGRSGKTDEAWKLLDKMPFEPTASMWGSLLGSSRIHKNIRLARIAAE--QLF 454

Query: 534 DLMQQRGWRPNNLTFVGVLSACSN 557
            L  + G   N++    V +A  N
Sbjct: 455 RLEPENG--GNHVLLSNVYAASGN 476



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 182/365 (49%), Gaps = 27/365 (7%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           LQ C +   L    + H   +  G   D    N+L+N+Y K  +   A ++FD M  R+ 
Sbjct: 63  LQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFDAMSVRSI 122

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           IS+ T I GYT + + VEA+ LFS +HREG ++  F  ++ L    +      C  +   
Sbjct: 123 ISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIECKQLHTI 182

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-----------GLF-----NDCFEEA 226
             KL  DS++FVGTA +D ++ C  ++ A  VF+            LF     N   EE 
Sbjct: 183 AIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQNGLHEEV 242

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           L  F   +  G +   FT + +L  C  L  I      H   +K  +  +L+VA +L+D+
Sbjct: 243 LCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVATSLVDV 302

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y K G+I  +  +F +M +K+V+ W+ MIA +++   S +A+ LF +M+Q  + PN+ T+
Sbjct: 303 YAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTY 362

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSD------VFVSNALMDVYAKCGRMENSVEL 400
           +S+L AC+    ++ G    +L     LLSD      V   + ++DV  + G+ + + +L
Sbjct: 363 LSILSACSHTGLVEEGRHYFNL-----LLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWKL 417

Query: 401 FAESP 405
             + P
Sbjct: 418 LDKMP 422


>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
 gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
          Length = 682

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 245/599 (40%), Positives = 349/599 (58%), Gaps = 11/599 (1%)

Query: 218 LFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
           + NDCF+E++  +  MR  G  P++FTF FVLKAC  +    +    H   +K   E D 
Sbjct: 84  VLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADA 143

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
           +V ++L++LYTK G I NA ++F+++P K+   W+  I+ Y       +A+++F R+ + 
Sbjct: 144 FVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEM 203

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            + P+ F+ V VL AC     L  G  I   +   G++ +VFV+ AL+D Y KCG ME +
Sbjct: 204 GLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERA 263

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
             +F    ++N V+W++MI GY   G   +A+ +F KML E +         VL +CA L
Sbjct: 264 RSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARL 323

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
            ALE G     L     +  + V+  ALIDMYAKCG +  A  VF  M   + V WNA I
Sbjct: 324 GALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAI 383

Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
           SG +M G   + L +F  M++ G +P+  TFVG+L AC++ GL+E+G  YF SM   + +
Sbjct: 384 SGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTL 443

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQ 637
            P IEHY  MV LLGRAG LD+A +LI+ +P + + ++W ALLG C +H + ++  +  +
Sbjct: 444 TPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVLK 503

Query: 638 HILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFR 686
            ++  EP     +VLLSNIYA +  WE+AA            K PG SWIE  G+VH F 
Sbjct: 504 KLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWIEVDGVVHQFL 563

Query: 687 AGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFA 746
            GDTSH     I   L  L    + AGY+P    VL D+ E+EKE ++  HSEKLA+AF 
Sbjct: 564 VGDTSHPLSEKIYAKLGELAKDLKAAGYVPTTDHVLFDIEEEEKEHFIGCHSEKLAVAFG 623

Query: 747 LFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           L    P+  I ++KNLR+C DCH AIK IS+I  REII+RD +RFH F DG CSC D+W
Sbjct: 624 LISTAPNDKILVVKNLRVCGDCHEAIKHISRIAGREIIVRDNNRFHCFTDGLCSCKDYW 682



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/499 (26%), Positives = 242/499 (48%), Gaps = 19/499 (3%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           IH  +L+ G   D +  N +L           + ++ D+  E N   F T I+G  ++  
Sbjct: 29  IHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLNDC 88

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
           F E++ ++ ++ +EG   + F F   LK    +  +EL   + + V K G +++AFV  +
Sbjct: 89  FQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKIS 148

Query: 198 LIDAFSVCGCVEFARKVFDGLFNDCF----------------EEALNFFSQMRAVGFKPN 241
           LI+ ++ CG ++ A KVFD + +  F                 EA++ F ++  +G +P+
Sbjct: 149 LINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPD 208

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
           +F+   VL AC     +R  +       +     +++VA AL+D Y K G +  AR +F+
Sbjct: 209 SFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFD 268

Query: 302 EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL 361
            M +K+++ WS MI  YA   L  +A++LF +M    + P+ +  V VL +CA +  L+L
Sbjct: 269 GMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALEL 328

Query: 362 GNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQ 421
           G+   +L+     L +  +  AL+D+YAKCGRM+ + E+F    K++ V WN  I G   
Sbjct: 329 GDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAM 388

Query: 422 LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ-VHCLTVKANYDMDVV 480
            G V  A+ +F +M +  +     T+  +L AC     +E G +  + +        ++ 
Sbjct: 389 SGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIE 448

Query: 481 VANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVF-DLMQQ 538
               ++D+  + G + +A +L+  M  + N + W A++ G  +H  +  V  V   L+  
Sbjct: 449 HYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVLKKLIAL 508

Query: 539 RGWRPNNLTFVGVLSACSN 557
             W   N   +  + A S+
Sbjct: 509 EPWHSGNYVLLSNIYAASH 527



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/377 (29%), Positives = 201/377 (53%), Gaps = 2/377 (0%)

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSF 313
           G   ++  K  H   L+   + D Y+   +L      G  + + RI ++  + ++  ++ 
Sbjct: 19  GFSCLKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNT 78

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
           MI      D   +++E++  MR+  ++P+ FTF  VL+ACA +   +LG ++HSLVV+ G
Sbjct: 79  MIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAG 138

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
             +D FV  +L+++Y KCG ++N+ ++F + P +N  +W   I GYV +G+  +A+ MF 
Sbjct: 139 CEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFR 198

Query: 434 KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCG 493
           ++LE  +     +   VL AC     L  G  +     +     +V VA AL+D Y KCG
Sbjct: 199 RLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCG 258

Query: 494 SITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLS 553
           ++  AR VFD M + N VSW++MI GY+ +GL  E L +F  M   G +P+    VGVL 
Sbjct: 259 NMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLC 318

Query: 554 ACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSV 613
           +C+  G LE G+     +  N  ++  +   T+++ +  + G +D+A ++  G+  +  V
Sbjct: 319 SCARLGALELGDWASNLINGNEFLDNSVLG-TALIDMYAKCGRMDRAWEVFRGMRKKDRV 377

Query: 614 MIWRALLGACIIHNNVE 630
            +W A +    +  +V+
Sbjct: 378 -VWNAAISGLAMSGHVK 393



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 179/382 (46%), Gaps = 18/382 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +S ++   L++C +  D +  + +H  V+K G   D F    L+N+Y K   + +A K+F
Sbjct: 107 DSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVF 166

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D++P++N  S+  TI GY    +  EA+ +F  L   G   + F+    L      G   
Sbjct: 167 DDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLR 226

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
               +   + + G   N FV TAL+D +  CG +E AR VFDG+                
Sbjct: 227 SGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYA 286

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            N   +EAL+ F +M   G KP+ +    VL +C  L  + +   A        +  +  
Sbjct: 287 SNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSV 346

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           +  AL+D+Y K G +  A  +F  M KKD + W+  I+  A +    DA+ LF +M ++ 
Sbjct: 347 LGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSG 406

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQ-IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
           + P++ TFV +L AC     ++ G +  +S+     L  ++     ++D+  + G ++ +
Sbjct: 407 IKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEA 466

Query: 398 VELFAESP-KRNHVTWNTMIVG 418
            +L    P + N + W  ++ G
Sbjct: 467 HQLIKSMPMEANAIVWGALLGG 488



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 1/157 (0%)

Query: 452 RACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEV 511
           R     + L+    +H   ++   D D  + N ++      G+   +  + D   + N  
Sbjct: 15  RLIQGFSCLKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIF 74

Query: 512 SWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSM 571
            +N MI G  ++    E ++++  M++ G  P++ TF  VL AC+     E G     S+
Sbjct: 75  LFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELG-VKMHSL 133

Query: 572 VANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIP 608
           V   G E       S+++L  + G +D A K+ + IP
Sbjct: 134 VVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIP 170


>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Glycine max]
          Length = 854

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 239/605 (39%), Positives = 360/605 (59%), Gaps = 20/605 (3%)

Query: 216 DGLFNDCFEE----ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT 271
           + L N C+      A++    M   G   ++ T++ ++K CL    +R  K  H      
Sbjct: 255 ESLLNHCYRRDLPSAMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSN 314

Query: 272 CYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELF 331
            Y    ++   L+++Y K   +  A+ +F++MP+++V+ W+ MI+ Y+   L+  A+ L 
Sbjct: 315 GYHPKTFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLL 374

Query: 332 CRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC 391
             M +  V PN FTF SVL+AC  +  L    Q+HS +++VGL SDVFV +AL+DVY+K 
Sbjct: 375 AFMFRDGVMPNMFTFSSVLRACERLYDL---KQLHSWIMKVGLESDVFVRSALIDVYSKM 431

Query: 392 GRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVL 451
           G +  ++++F E    + V WN++I  + Q  +  +A+ ++  M     PA + T +SVL
Sbjct: 432 GELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVL 491

Query: 452 RACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEV 511
           RAC SL+ LE G Q H   +K  +D D+++ NAL+DMY KCGS+ DA+ +F+ M   + +
Sbjct: 492 RACTSLSLLELGRQAHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVI 549

Query: 512 SWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSM 571
           SW+ MI+G + +G S E L +F+ M+ +G +PN++T +GVL ACS+ GL+ +G  YF+SM
Sbjct: 550 SWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSM 609

Query: 572 VANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEI 631
              YGI+P  EHY  M+ LLGRA  LD   KLI  +  +P V+ WR LL AC    NV++
Sbjct: 610 NNLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDL 669

Query: 632 GRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQG 680
              +A+ IL  +P+D   +VLLSNIYA+++ W   A            KEPG SWIE   
Sbjct: 670 ATYAAKEILKLDPQDTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVNK 729

Query: 681 MVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEK 740
            +H F  GD SH  ++ I   L     +   AGY+PD + VL+D+  +++E  L  HSEK
Sbjct: 730 QIHAFILGDKSHPQIDEINRQLNQFICRLAGAGYVPDTNFVLQDLEGEQREDSLRYHSEK 789

Query: 741 LALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCS 800
           LA+ F +   P    IRI KNL+IC DCH   K+I+++ QR I+IRD  R+HHFQDG CS
Sbjct: 790 LAIVFGIMSFPKEKTIRIWKNLKICGDCHKFAKLIAELEQRHIVIRDPIRYHHFQDGVCS 849

Query: 801 CGDFW 805
           CGD+W
Sbjct: 850 CGDYW 854



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/380 (31%), Positives = 196/380 (51%), Gaps = 23/380 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +S +Y+  ++ C+ +  ++    +H  +   G     F TN+L+N+YVK N L +A  LF
Sbjct: 284 DSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEAQVLF 343

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D+MPERN +S+ T I  Y+ +     A+ L + + R+G   N F F++ L+    +    
Sbjct: 344 DKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERL---Y 400

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF---- 223
               + + + K+G +S+ FV +ALID +S  G +  A KVF  +       +N       
Sbjct: 401 DLKQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFA 460

Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                +EAL+ +  MR VGF  +  T   VL+AC  L  + + + AH   LK  ++ DL 
Sbjct: 461 QHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLK--FDQDLI 518

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           +  ALLD+Y K G + +A+ IF  M KKDVI WS MIA  AQ   S++A+ LF  M+   
Sbjct: 519 LNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQG 578

Query: 339 VAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
             PN  T + VL AC+    ++ G     S+    G+         ++D+  +  ++++ 
Sbjct: 579 PKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREHYGCMLDLLGRAEKLDDM 638

Query: 398 VELFAE-SPKRNHVTWNTMI 416
           V+L  E + + + VTW T++
Sbjct: 639 VKLIHEMNCEPDVVTWRTLL 658


>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
 gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
 gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
          Length = 922

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 272/823 (33%), Positives = 428/823 (52%), Gaps = 94/823 (11%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N+ ++   +   +QN D+  A  +   +  +    D+ + N +L  Y    ++ DA  
Sbjct: 124 ERNTVAWNAMISCYVQNGDITMARRLFDAMPSR----DVSSWNSMLTGYCHSLQMVDARN 179

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           LF++MPERN +S+   I GY       +A  +F  +HREG   +   F + L  +  +G 
Sbjct: 180 LFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGN 239

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQ 232
            ++   +     K G + +  +GTA+++ +S    V               + A+ FF  
Sbjct: 240 LDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSV--------------LDTAIKFFES 285

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVA--------------KSAHGCALKTCYEMD-- 276
           M     + N +T++ ++ A      I  A              ++A    L  C  +D  
Sbjct: 286 M----IERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDA 341

Query: 277 --LYVAV---------ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSI 325
             L+  +         AL+  Y ++G ++ A+ +F++MP ++ I W+ MIA YAQ   S 
Sbjct: 342 RILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSE 401

Query: 326 DAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALM 385
           +A+ L   + ++ + P+  +  S+  AC+ +  L+ G Q+HSL V+VG   + F  NAL+
Sbjct: 402 EALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALI 461

Query: 386 DVYAKCGRMENSVELFAESP-------------------------------KRNHVTWNT 414
            +Y KC  ME + ++F+                                   R+ V+W T
Sbjct: 462 TMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTT 521

Query: 415 MIVGYVQLGEVGKAMIMFSKML-EEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
           +I  Y    +  +AM  F  M  E ++P + +  + +L  C SL A + G Q+H + +K 
Sbjct: 522 IISAYAHAEQSNEAMGAFKTMFCEHELPNSPI-LTILLGVCGSLGASKIGQQIHTVAIKL 580

Query: 474 NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVF 533
             D +++VANALI MY KCG   D+R +FD+M + +  +WN +I+GY+ HGL  E +K++
Sbjct: 581 GMDSELIVANALISMYFKCGC-ADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMY 639

Query: 534 DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGR 593
             M+  G  PN +TFVG+L+ACS+ GL+++G  +FKSM  +YG+ P  EHY  MV LLGR
Sbjct: 640 QHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGR 699

Query: 594 AGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLL 653
            G +  A + I  +P +P  +IW ALLGAC IH N EIG+ +A+ +   EP +   +V+L
Sbjct: 700 TGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVML 759

Query: 654 SNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGML 702
           SNIY+    W + A            KEPG SW + +  +H F  GD  H  +  I   L
Sbjct: 760 SNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATL 819

Query: 703 EWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNL 762
           E L    +  GY+PD   VL D+ E++KE  L  HSEKLA+A+ L   P   PI+I+KNL
Sbjct: 820 EELYTLLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNL 879

Query: 763 RICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           RIC DCHT IK +S + +R+I IRD +RFHHF++G CSC DFW
Sbjct: 880 RICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCEDFW 922



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 88/376 (23%), Positives = 176/376 (46%), Gaps = 40/376 (10%)

Query: 262 KSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQT 321
           + AHG       E+++    A +    + G +  AR +F+ MP++D+I W+ MI+ Y   
Sbjct: 26  RHAHG-------ELEVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHN 78

Query: 322 DLSIDAVELF-----CRMRQAFVAPNQFTFVS-VLQACATMEGLDLGNQIH-----SLVV 370
            +   A +L+       MR   +  + +  +  VL+A    +G+   N +      S  V
Sbjct: 79  GMPDAARDLYDAISGGNMRTGAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYV 138

Query: 371 RVGLLS------------DVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           + G ++            DV   N+++  Y    +M ++  LF + P+RN V+W  MI G
Sbjct: 139 QNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISG 198

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           Y ++   GKA  +F KM  E +   +  ++S L A   L  L+    +  L +K  ++ D
Sbjct: 199 YGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERD 258

Query: 479 VVVANALIDMYAKCGSITDARL-VFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQ 537
           VV+  A++++Y++  S+ D  +  F+ M + NE +W+ MI+  S  G     + V++   
Sbjct: 259 VVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDP 318

Query: 538 QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHL 597
            +          G L+ C   G ++     F+ +      EP +  + ++++   + G +
Sbjct: 319 VKSIACRTALITG-LAQC---GRIDDARILFEQIP-----EPIVVSWNALITGYMQNGMV 369

Query: 598 DKAAKLIEGIPFQPSV 613
           ++A +L + +PF+ ++
Sbjct: 370 NEAKELFDKMPFRNTI 385



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 102/258 (39%), Gaps = 26/258 (10%)

Query: 389 AKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYS 448
            + GR+  + E+F   P+R+ + WN+MI  Y   G    A  ++  +    +    +  S
Sbjct: 45  GRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLS 104

Query: 449 SVLRACASLAALE--PGM----------QVHCLTVKANYDM-----------DVVVANAL 485
              R    L A     GM           + C     +  M           DV   N++
Sbjct: 105 GYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSM 164

Query: 486 IDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNN 545
           +  Y     + DAR +F+ M + N VSW  MISGY       +   +F  M + G  P+ 
Sbjct: 165 LTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQ 224

Query: 546 LTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGR-AGHLDKAAKLI 604
             F   LSA    G L+  E+  + +    G E  +   T+++++  R    LD A K  
Sbjct: 225 SNFASALSAVKGLGNLDVLES-LRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFF 283

Query: 605 EGIPFQPSVMIWRALLGA 622
           E +  + +   W  ++ A
Sbjct: 284 ESM-IERNEYTWSTMIAA 300



 Score = 45.8 bits (107), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 70/152 (46%), Gaps = 11/152 (7%)

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
           A+ +++V   +A I    + G + +AR VFD M   + ++WN+MIS Y  +G+      +
Sbjct: 28  AHGELEVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDL 87

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
           +D +     R   +    +LS     G + +    F  M+    +      + +M+S   
Sbjct: 88  YDAISGGNMRTGAI----LLSGYGRLGRVLEARRVFDGMLERNTVA-----WNAMISCYV 138

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALL-GAC 623
           + G +  A +L + +P +  V  W ++L G C
Sbjct: 139 QNGDITMARRLFDAMPSR-DVSSWNSMLTGYC 169


>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Glycine max]
          Length = 747

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 236/590 (40%), Positives = 355/590 (60%), Gaps = 42/590 (7%)

Query: 258 IRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDV--------- 308
           + +    HG  +K  ++  ++V   L+D+Y+K+G +  AR+ F+EMP+K+V         
Sbjct: 158 VHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAG 217

Query: 309 ----------------------IPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
                                 I W+ MIA + Q  L  +A++LF  MR   +  +Q+TF
Sbjct: 218 LMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTF 277

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
            SVL AC  +  L  G Q+H+ ++R     ++FV +AL+D+Y KC  ++++  +F +   
Sbjct: 278 GSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNC 337

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
           +N V+W  M+VGY Q G   +A+ +F  M    +   + T  SV+ +CA+LA+LE G Q 
Sbjct: 338 KNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQF 397

Query: 467 HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLS 526
           HC  + +     + V+NAL+ +Y KCGSI D+  +F  M+  +EVSW A++SGY+  G +
Sbjct: 398 HCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKA 457

Query: 527 AEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTS 586
            E L++F+ M   G++P+ +TF+GVLSACS  GL+++G   F+SM+  + I P  +HYT 
Sbjct: 458 NETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTC 517

Query: 587 MVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPED 646
           M+ L  RAG L++A K I  +PF P  + W +LL +C  H N+EIG+ +A+ +L  EP +
Sbjct: 518 MIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKLEPHN 577

Query: 647 EATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADM 695
            A+++LLS+IYA    WE+ A+           KEPG SWI+ +  VH F A D S+   
Sbjct: 578 TASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCSWIKYKNQVHIFSADDQSNPFS 637

Query: 696 NIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSP 755
           + I   LE LN K  + GY+PD+++VL DV + EK + L  HSEKLA+AF L  +PP  P
Sbjct: 638 DQIYSELEKLNYKMVQEGYVPDMNSVLHDVDDSEKIKMLNHHSEKLAIAFGLIFIPPGLP 697

Query: 756 IRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           IR++KNLR+C DCH A K ISKI QREI++RD  RFH F+DG CSCGDFW
Sbjct: 698 IRVVKNLRVCGDCHNATKYISKITQREILVRDAARFHLFKDGRCSCGDFW 747



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 138/484 (28%), Positives = 234/484 (48%), Gaps = 50/484 (10%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           +L++ N LL+ Y KL  LP+  ++F  MP R+ +S+ + I  Y      +++V  ++ + 
Sbjct: 74  NLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLML 133

Query: 150 REG-HELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCV 208
             G   LN  A +  L +    G   L   V   V K G  S  FVG+ L+D +S  G V
Sbjct: 134 YNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLV 193

Query: 209 EFARKVFD---------------------------GLFNDCFE----------------- 224
             AR+ FD                            LF D  E                 
Sbjct: 194 FCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNG 253

Query: 225 ---EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
              EA++ F +MR    + + +TF  VL AC G+  ++  K  H   ++T Y+ +++V  
Sbjct: 254 LDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGS 313

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           AL+D+Y K   I +A  +F +M  K+V+ W+ M+  Y Q   S +AV++FC M+   + P
Sbjct: 314 ALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEP 373

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           + FT  SV+ +CA +  L+ G Q H   +  GL+S + VSNAL+ +Y KCG +E+S  LF
Sbjct: 374 DDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLF 433

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
           +E    + V+W  ++ GY Q G+  + + +F  ML       +VT+  VL AC+    ++
Sbjct: 434 SEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQ 493

Query: 462 PGMQVHCLTVKANYDMDVVVA-NALIDMYAKCGSITDARLVFDMMN-DWNEVSWNAMISG 519
            G Q+    +K +  + +      +ID++++ G + +AR   + M    + + W +++S 
Sbjct: 494 KGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSS 553

Query: 520 YSMH 523
              H
Sbjct: 554 CRFH 557



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 192/383 (50%), Gaps = 38/383 (9%)

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
           + +LY    LL  Y+K   +    R+F  MP +D++ W+ +I+ YA     + +V+ +  
Sbjct: 72  QRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNL 131

Query: 334 MRQAFVAP---NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAK 390
           M   +  P   N+    ++L   +    + LG Q+H  VV+ G  S VFV + L+D+Y+K
Sbjct: 132 M--LYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSK 189

Query: 391 -------------------------------CGRMENSVELFAESPKRNHVTWNTMIVGY 419
                                          C R+E+S +LF +  +++ ++W  MI G+
Sbjct: 190 TGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGF 249

Query: 420 VQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDV 479
            Q G   +A+ +F +M  E +   + T+ SVL AC  + AL+ G QVH   ++ +Y  ++
Sbjct: 250 TQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNI 309

Query: 480 VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
            V +AL+DMY KC SI  A  VF  MN  N VSW AM+ GY  +G S E +K+F  MQ  
Sbjct: 310 FVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNN 369

Query: 540 GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDK 599
           G  P++ T   V+S+C+N   LE+G A F       G+   I    ++V+L G+ G ++ 
Sbjct: 370 GIEPDDFTLGSVISSCANLASLEEG-AQFHCRALVSGLISFITVSNALVTLYGKCGSIED 428

Query: 600 AAKLIEGIPFQPSVMIWRALLGA 622
           + +L   + +   V  W AL+  
Sbjct: 429 SHRLFSEMSYVDEVS-WTALVSG 450



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/396 (25%), Positives = 190/396 (47%), Gaps = 27/396 (6%)

Query: 95  NVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHE 154
           N L+   ++ +R+ D+ +LF +M E+++IS+   I G+T +    EA+ LF  +  E  E
Sbjct: 212 NTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLE 271

Query: 155 LNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKV 214
           ++ + F + L     +   +    V A + +  +  N FVG+AL+D +  C  ++ A  V
Sbjct: 272 MDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETV 331

Query: 215 FDGLF----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTI 258
           F  +                 N   EEA+  F  M+  G +P++FT   V+ +C  L ++
Sbjct: 332 FRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASL 391

Query: 259 RVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARY 318
                 H  AL +     + V+ AL+ LY K G I ++ R+F EM   D + W+ +++ Y
Sbjct: 392 EEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGY 451

Query: 319 AQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV---RVGLL 375
           AQ   + + + LF  M      P++ TF+ VL AC+    +  GNQI   ++   R+  +
Sbjct: 452 AQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPI 511

Query: 376 SDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMIVG--YVQLGEVGKAMIMF 432
            D +    ++D++++ GR+E + +   + P   + + W +++    + +  E+GK     
Sbjct: 512 EDHYT--CMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAES 569

Query: 433 SKMLEEQVPATEVTYSSVLRACAS---LAALEPGMQ 465
              LE    A+ +  SS+  A      +A L  GM+
Sbjct: 570 LLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMR 605



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 119/272 (43%), Gaps = 36/272 (13%)

Query: 326 DAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALM 385
           D  ++ C + +AF  P  F   +++ A A  + +    ++   + +  L S     N L+
Sbjct: 27  DTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYS----WNTLL 82

Query: 386 DVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML-EEQVPATE 444
             Y+K   +     +F   P R+ V+WN++I  Y   G + +++  ++ ML         
Sbjct: 83  SSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNR 142

Query: 445 VTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAK------------- 491
           +  S++L   +    +  G+QVH   VK  +   V V + L+DMY+K             
Sbjct: 143 IALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDE 202

Query: 492 ------------------CGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVF 533
                             C  I D+R +F  M + + +SW AMI+G++ +GL  E + +F
Sbjct: 203 MPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLF 262

Query: 534 DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE 565
             M+      +  TF  VL+AC     L++G+
Sbjct: 263 REMRLENLEMDQYTFGSVLTACGGVMALQEGK 294



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/285 (22%), Positives = 119/285 (41%), Gaps = 24/285 (8%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E + +++ + L +C     LQ    +H  +++     ++F  + L+++Y K   +  A  
Sbjct: 271 EMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAET 330

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +F +M  +N +S+   + GY  +    EAV +F  +   G E + F   + +    ++  
Sbjct: 331 VFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLAS 390

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------------- 218
            E            G  S   V  AL+  +  CG +E + ++F  +              
Sbjct: 391 LEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSG 450

Query: 219 ---FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
              F     E L  F  M A GFKP+  TF  VL AC     ++         +K    +
Sbjct: 451 YAQFGKA-NETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRII 509

Query: 276 ---DLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
              D Y    ++DL++++G +  AR+   +MP   D I W+ +++
Sbjct: 510 PIEDHY--TCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLS 552



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 4/121 (3%)

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
           C  L       ++HC  +KA  + ++ + N L+  YAK   IT AR VFD M   N  SW
Sbjct: 19  CELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSW 78

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA 573
           N ++S YS      E+ +VF  M  R    + +++  ++SA +  G L Q    +  M+ 
Sbjct: 79  NTLLSSYSKLACLPEMERVFHAMPTR----DMVSWNSLISAYAGRGFLLQSVKAYNLMLY 134

Query: 574 N 574
           N
Sbjct: 135 N 135



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 99/251 (39%), Gaps = 25/251 (9%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E +  +  + + SC     L+     HC+ L  G    +  +N L+ +Y K   + D+ +
Sbjct: 372 EPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHR 431

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           LF EM   + +S+   + GY    +  E + LF ++   G + +   F   L      G 
Sbjct: 432 LFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGL 491

Query: 173 AELCPCVFACVYKLGHDSNAFVG--TALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFF 230
            +    +F  + K  H         T +ID FS  G +E ARK               F 
Sbjct: 492 VQKGNQIFESMIK-EHRIIPIEDHYTCMIDLFSRAGRLEEARK---------------FI 535

Query: 231 SQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKS 290
           ++M    F P+   +A +L +C     + + K A    LK     +    + L  +Y   
Sbjct: 536 NKM---PFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKL-EPHNTASYILLSSIYAAK 591

Query: 291 G---EISNARR 298
           G   E++N R+
Sbjct: 592 GKWEEVANLRK 602


>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
 gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
          Length = 745

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 259/745 (34%), Positives = 405/745 (54%), Gaps = 29/745 (3%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D F  N+++ +Y K     DA ++FD + +RN  S+   ++ Y  ++ + EA+ ++  + 
Sbjct: 1   DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
           R+   ++ +  ++ L     +   E    V     +LG + +  V T+LI  F+ CGC+E
Sbjct: 61  RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120

Query: 210 FARKVFD--GLFNDCF---------------EEALNFFSQMRAVGFKPNNFTFAFVLKAC 252
            A  VF   G   D                 + AL+ + +MR+ G +P+ FT+A +L AC
Sbjct: 121 EAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGAC 180

Query: 253 LGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWS 312
              D +   K  H   L++ +  ++ V  AL+ +Y K G + +++ +F  M  KDV+ W+
Sbjct: 181 SSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWN 240

Query: 313 FMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV 372
            MIA Y       DA  LF RM      P+ +TF S+L ACA+ + L+ G  +H  +   
Sbjct: 241 AMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITAR 300

Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMF 432
           G   D  + N L+ ++ +CG +E++   F    K+    WNTM+  Y Q  +   A+ ++
Sbjct: 301 GFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLY 360

Query: 433 SKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKC 492
             ML E       T+SSV+ +CASL AL  G  +H  +    ++ DV++  AL++MYAKC
Sbjct: 361 KNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKC 420

Query: 493 GSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL 552
           GS+ DA+  FD +++ + VSW+AMI+  + HG + E L++  LM  +G   N +T   VL
Sbjct: 421 GSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVL 480

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
            ACS+GG L +G  YF  +  ++GIE   E+    + LLGRAG L +A  ++  +PF+ S
Sbjct: 481 HACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKVS 540

Query: 613 VMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE-------- 664
            +    LLG C +H +V  G+   + I+  EPE+  ++VLL+N+YA A  W+        
Sbjct: 541 FVALVTLLGGCKVHGDVRRGKALTKRIVALEPENPGSYVLLNNMYAAAGRWDDVAKLRRY 600

Query: 665 ---KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSR-KAGYIPDLSA 720
              K   ++ G S IE +  ++ F  GDTS+     IR  LE L  + + + GY+PD   
Sbjct: 601 MRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNPRNLEIRAELERLYSRMKEEEGYVPDTRD 660

Query: 721 VLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQ 780
           V  DV +D+KE  L  HSEK+A+ F L   PP S +RIIKNLR+C DCHT  K+ SKI  
Sbjct: 661 VFHDVSDDKKEELLKFHSEKMAMGFGLITSPPGSTLRIIKNLRVCSDCHTVGKLASKITG 720

Query: 781 REIIIRDVHRFHHFQDGCCSCGDFW 805
           R II+RD  RFHHF+ G CSCGD+W
Sbjct: 721 RRIIVRDGTRFHHFEGGICSCGDYW 745



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 196/426 (46%), Gaps = 26/426 (6%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E ++ +YA  L +C   D L     IH  +L+  +  ++   N L+ +Y K   L D+  
Sbjct: 167 EPDAFTYAAILGACSSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKS 226

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           LF  M  ++ +S+   I  YT+     +A  LF  +   GH  + + F++ L    S   
Sbjct: 227 LFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKR 286

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-------GLFN----- 220
            E    +   +   G D +  +   LI  F+ CG +E AR+ F        G +N     
Sbjct: 287 LEDGRMLHVRITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAA 346

Query: 221 ----DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
               D  ++AL  +  M   GF P+ FTF+ V+ +C  L  +R  K  H C+    +E D
Sbjct: 347 YAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKD 406

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           + +  AL+++Y K G +++A++ F+ +  KDV+ WS MIA  AQ   + +A+EL   M  
Sbjct: 407 VILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNL 466

Query: 337 AFVAPNQFTFVSVLQACA----TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCG 392
             +A N+ T  SVL AC+      EG+D       L    G+  D   +   +D+  + G
Sbjct: 467 QGIAQNEVTASSVLHACSHGGRLYEGIDY---FMGLSQDFGIERDEENTVGFIDLLGRAG 523

Query: 393 RMENSVELFAESP-KRNHVTWNTMIVGYVQLGEV--GKAMIMFSKMLEEQVPATEVTYSS 449
            ++ +  +    P K + V   T++ G    G+V  GKA+      LE + P + V  ++
Sbjct: 524 WLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKALTKRIVALEPENPGSYVLLNN 583

Query: 450 VLRACA 455
           +  A  
Sbjct: 584 MYAAAG 589


>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
          Length = 922

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 272/823 (33%), Positives = 428/823 (52%), Gaps = 94/823 (11%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N+ ++   +   +QN D+  A  +   +  +    D+ + N +L  Y    ++ DA  
Sbjct: 124 ERNTVAWNAMISCYVQNGDITMARRLFDAMPSR----DVSSWNSMLTGYCHSLQMVDARN 179

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           LF++MPERN +S+   I GY       +A  +F  +HREG   +   F + L  +  +G 
Sbjct: 180 LFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGN 239

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQ 232
            ++   +     K G + +  +GTA+++ +S    V               + A+ FF  
Sbjct: 240 LDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSV--------------LDTAIKFFES 285

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVA--------------KSAHGCALKTCYEMD-- 276
           M     + N +T++ ++ A      I  A              ++A    L  C  +D  
Sbjct: 286 M----IERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDA 341

Query: 277 --LYVAV---------ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSI 325
             L+  +         AL+  Y ++G ++ A+ +F++MP ++ I W+ MIA YAQ   S 
Sbjct: 342 RILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSE 401

Query: 326 DAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALM 385
           +A+ L   + ++ + P+  +  S+  AC+ +  L+ G Q+HSL V+VG   + F  NAL+
Sbjct: 402 EALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALI 461

Query: 386 DVYAKCGRMENSVELFAESP-------------------------------KRNHVTWNT 414
            +Y KC  ME + ++F+                                   R+ V+W T
Sbjct: 462 TMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTT 521

Query: 415 MIVGYVQLGEVGKAMIMFSKML-EEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
           +I  Y    +  +AM  F  M  E ++P + +  + +L  C SL A + G Q+H + +K 
Sbjct: 522 IISAYAHAEQSNEAMGAFKTMFCEHELPNSPI-LTILLGVCGSLGASKIGQQIHTVAIKL 580

Query: 474 NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVF 533
             D +++VANALI MY KCG   D+R +FD+M + +  +WN +I+GY+ HGL  E +K++
Sbjct: 581 GMDSELIVANALISMYFKCGC-ADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMY 639

Query: 534 DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGR 593
             M+  G  PN +TFVG+L+ACS+ GL+++G  +FKSM  +YG+ P  EHY  MV LLGR
Sbjct: 640 QHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGR 699

Query: 594 AGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLL 653
            G +  A + I  +P +P  +IW ALLGAC IH N EIG+ +A+ +   EP +   +V+L
Sbjct: 700 TGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVML 759

Query: 654 SNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGML 702
           SNIY+    W + A            KEPG SW + +  +H F  GD  H  +  I   L
Sbjct: 760 SNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATL 819

Query: 703 EWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNL 762
           E L    +  GY+PD   VL D+ E++KE  L  HSEKLA+A+ L   P   PI+I+KNL
Sbjct: 820 EELYTLLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNL 879

Query: 763 RICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           RIC DCHT IK +S + +R+I IRD +RFHHF++G CSC DFW
Sbjct: 880 RICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCEDFW 922



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 88/376 (23%), Positives = 176/376 (46%), Gaps = 40/376 (10%)

Query: 262 KSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQT 321
           + AHG       E+++    A +    + G +  AR +F+ MP++D+I W+ MI+ Y   
Sbjct: 26  RHAHG-------ELEVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHN 78

Query: 322 DLSIDAVELF-----CRMRQAFVAPNQFTFVS-VLQACATMEGLDLGNQIH-----SLVV 370
            +   A +L+       MR   +  + +  +  VL+A    +G+   N +      S  V
Sbjct: 79  GMPDAARDLYDAISGGNMRTGAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYV 138

Query: 371 RVGLLS------------DVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           + G ++            DV   N+++  Y    +M ++  LF + P+RN V+W  MI G
Sbjct: 139 QNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISG 198

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           Y ++   GKA  +F KM  E +   +  ++S L A   L  L+    +  L +K  ++ D
Sbjct: 199 YGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERD 258

Query: 479 VVVANALIDMYAKCGSITDARL-VFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQ 537
           VV+  A++++Y++  S+ D  +  F+ M + NE +W+ MI+  S  G     + V++   
Sbjct: 259 VVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDP 318

Query: 538 QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHL 597
            +          G L+ C   G ++     F+ +      EP +  + ++++   + G +
Sbjct: 319 VKSIACRTALITG-LAQC---GRIDDARILFEQIP-----EPIVVSWNALITGYMQNGMV 369

Query: 598 DKAAKLIEGIPFQPSV 613
           ++A +L + +PF+ ++
Sbjct: 370 NEAKELFDKMPFRNTI 385



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 102/258 (39%), Gaps = 26/258 (10%)

Query: 389 AKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYS 448
            + GR+  + E+F   P+R+ + WN+MI  Y   G    A  ++  +    +    +  S
Sbjct: 45  GRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLS 104

Query: 449 SVLRACASLAALE--PGM----------QVHCLTVKANYDM-----------DVVVANAL 485
              R    L A     GM           + C     +  M           DV   N++
Sbjct: 105 GYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSM 164

Query: 486 IDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNN 545
           +  Y     + DAR +F+ M + N VSW  MISGY       +   +F  M + G  P+ 
Sbjct: 165 LTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQ 224

Query: 546 LTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGR-AGHLDKAAKLI 604
             F   LSA    G L+  E+  + +    G E  +   T+++++  R    LD A K  
Sbjct: 225 SNFASALSAVKGLGNLDVLES-LRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFF 283

Query: 605 EGIPFQPSVMIWRALLGA 622
           E +  + +   W  ++ A
Sbjct: 284 ESM-IERNEYTWSTMIAA 300



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 70/152 (46%), Gaps = 11/152 (7%)

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
           A+ +++V   +A I    + G + +AR VFD M   + ++WN+MIS Y  +G+      +
Sbjct: 28  AHGELEVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDL 87

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
           +D +     R   +    +LS     G + +    F  M+    +      + +M+S   
Sbjct: 88  YDAISGGNMRTGAI----LLSGYGRLGRVLEARRVFDGMLERNTVA-----WNAMISCYV 138

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALL-GAC 623
           + G +  A +L + +P +  V  W ++L G C
Sbjct: 139 QNGDITMARRLFDAMPSR-DVSSWNSMLTGYC 169


>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
          Length = 824

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 277/762 (36%), Positives = 412/762 (54%), Gaps = 87/762 (11%)

Query: 89  LDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTL 148
           +++   N  +  +++  R+PDA +LF  MP R+T ++ T + GY  + +  +A+  F ++
Sbjct: 105 MEVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSI 164

Query: 149 HREGHELNPFAFTAFLKVL-VSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGC 207
            R     + F++   L  L VS   A++         K   DS ++    +I + +  G 
Sbjct: 165 PRP----DSFSYNTLLHALGVSSSLADVRALFDEMPVK---DSVSY--NVMISSHANHGL 215

Query: 208 VEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGC 267
           V  AR  FD               +  AV +  N    A+V          R+ ++    
Sbjct: 216 VSLARHYFD------------LAPEKDAVSW--NGMLAAYVRNG-------RIQEARELF 254

Query: 268 ALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDA 327
             +T  E D     AL+  Y +  +I  A+++F +MP++DV+ W+ M++ YA+     +A
Sbjct: 255 DSRT--EWDAISWNALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRGDMAEA 312

Query: 328 VELFCRMRQAFVAP--NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALM 385
             LF       VAP  + FT+ +++   A    L+   ++   +     +S     NA+M
Sbjct: 313 RRLFD------VAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDKNAVS----WNAMM 362

Query: 386 DVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE------- 438
             Y +   ME + ELF   P RN  +WNTM+ GY Q G + +A  +F  M ++       
Sbjct: 363 AAYVQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAA 422

Query: 439 ------QVPATEVT------------------YSSVLRACASLAALEPGMQVHCLTVKAN 474
                 Q+  +E T                  ++ VL  CA +AALE GMQ+H   +KA 
Sbjct: 423 MLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAG 482

Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
           Y +   V NAL+ MY KCGS+ +A   F+ M + + VSWN MI+GY+ HG   E L+VFD
Sbjct: 483 YGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFD 542

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
            M++   +P+++T VGVL+ACS+ GL+E+G +YF SM  ++G+    EHYT M+ LLGRA
Sbjct: 543 TMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRA 602

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLS 654
           G LD+A  L++ +PF+P   +W ALLGA  IH N E+GR +A+ I + EPE+   +VLLS
Sbjct: 603 GRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLS 662

Query: 655 NIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLE 703
           NIYA +  W           E+   K PG SWIE Q  VH F  GD+ H +   I   LE
Sbjct: 663 NIYASSGKWRDVDKMRHIMHERGVKKVPGFSWIEVQNKVHTFSVGDSVHPEREDIYAFLE 722

Query: 704 WLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLR 763
            L+++ +KAGY+     VL DV E+EKE  L  HSEKLA+A+ + K+PP  PIR+IKNLR
Sbjct: 723 DLDIRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILKIPPGRPIRVIKNLR 782

Query: 764 ICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +C DCHTA K IS I  R II+RD +RFHHF+DG CSCGD+W
Sbjct: 783 VCRDCHTAFKCISAIEGRLIILRDSNRFHHFRDGSCSCGDYW 824



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 102/252 (40%), Gaps = 28/252 (11%)

Query: 88  CLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFST 147
           C ++ + N +L  Y +   L +A  +F  MP+++ +S+   +  Y+      E + LF  
Sbjct: 383 CRNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKE 442

Query: 148 LHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGC 207
           + R G  +N  AF   L     +   E    + + + K G+    FVG AL+  +  CG 
Sbjct: 443 MGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGS 502

Query: 208 VEFARKVFD---------------GLFNDCF-EEALNFFSQMRAVGFKPNNFTFAFVLKA 251
           +E A   F+               G     F +EAL  F  MR    KP++ T   VL A
Sbjct: 503 MEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAA 562

Query: 252 CLGLDTIRVAKSAHGCALKTCYEMDLYVAVA------LLDLYTKSGEISNARRIFEEMP- 304
           C     +       G +       D  VA        ++DL  ++G +  A  + ++MP 
Sbjct: 563 CSHSGLVE-----KGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPF 617

Query: 305 KKDVIPWSFMIA 316
           + D   W  ++ 
Sbjct: 618 EPDSTMWGALLG 629



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 110/267 (41%), Gaps = 29/267 (10%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  ++A  L +C     L+  M +H +++K G  +  F  N LL +Y K   + +A   F
Sbjct: 451 NRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAF 510

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           +EM ER+ +S+ T I GY       EA+ +F T+ +   + +       L      G  E
Sbjct: 511 EEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVE 570

Query: 175 LCPCVFACVYK-LGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQM 233
                F  +++  G  +     T +ID     G +               +EA+N    M
Sbjct: 571 KGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRL---------------DEAVNL---M 612

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA---VALLDLYTKS 290
           + + F+P++  +     A LG   I         A +  +E++   A   V L ++Y  S
Sbjct: 613 KDMPFEPDSTMWG----ALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASS 668

Query: 291 G---EISNARRIFEEMPKKDVIPWSFM 314
           G   ++   R I  E   K V  +S++
Sbjct: 669 GKWRDVDKMRHIMHERGVKKVPGFSWI 695



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 113/282 (40%), Gaps = 33/282 (11%)

Query: 437 EEQVPATEVTYSSVLRACASLAA--LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGS 494
           E Q     +  S  LRA A   +    P     C+T K   DM+V+  N  I  + + G 
Sbjct: 65  EPQFGKPPMLPSRHLRAAARQRSHRRPPAPADACITGKP--DMEVIRRNRAITAHMRAGR 122

Query: 495 ITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSA 554
           + DA  +F  M   +  ++N M++GY+ +G   + L  F  +     RP++ ++  +L A
Sbjct: 123 VPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIP----RPDSFSYNTLLHA 178

Query: 555 CSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVM 614
                 L    A F  M     +      Y  M+S     G +  A    +  P + +V 
Sbjct: 179 LGVSSSLADVRALFDEMPVKDSVS-----YNVMISSHANHGLVSLARHYFDLAPEKDAVS 233

Query: 615 IWRALLGACIIHNNVEIGRLSAQHILDFEPEDEAT--------HVLLSNIYAMARSWEKA 666
            W  +L A + +  ++     A+ + D   E +A         +V  S I    + + K 
Sbjct: 234 -WNGMLAAYVRNGRIQ----EARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKM 288

Query: 667 ASKEPGLSWIENQGMVHYFRAGDTSHA----DMNIIRGMLEW 704
             ++  +SW  N  +  Y R GD + A    D+  IR +  W
Sbjct: 289 PQRDV-VSW--NTMVSGYARRGDMAEARRLFDVAPIRDVFTW 327


>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
          Length = 785

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 272/750 (36%), Positives = 404/750 (53%), Gaps = 42/750 (5%)

Query: 91  LFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHR 150
           LF  N LL  Y +L     A +L DEMP RN +SF   I  Y+       ++   +   R
Sbjct: 43  LFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARR 102

Query: 151 EGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEF 210
            G +++ F++ A L      G       V A     G  S  FV  +L+  +S CG +  
Sbjct: 103 AGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGE 162

Query: 211 ARKVFD---------------GLFN-DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLG 254
           AR+VFD               G       EE +  F+ MR  G   N+F    V+K C G
Sbjct: 163 ARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSG 222

Query: 255 LD--TIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWS 312
               T+ +A++ HGC +K   + D+++  A++D+Y K G +  A  +F  + + +V+ ++
Sbjct: 223 RGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFN 282

Query: 313 FMIARYAQTDLSI------DAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIH 366
            MIA + +T+  I      +A+ L+  ++   + P +FTF SVL+AC     L+ G QIH
Sbjct: 283 TMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIH 342

Query: 367 SLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVG 426
             V++     D F+ +AL+D+Y   G ME+    F  SPK + VTW  M+ G VQ     
Sbjct: 343 GQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHE 402

Query: 427 KAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALI 486
           KA+ +F + L   +     T SSV+ ACASLA    G Q+ C   K+ +D   V+ N+ +
Sbjct: 403 KALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCV 462

Query: 487 DMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNL 546
            MYA+ G +  A   F  M   + VSW+A+IS ++ HG + + L  FD M      PN +
Sbjct: 463 HMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEI 522

Query: 547 TFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEG 606
           TF+GVL+ACS+GGL+++G  Y+++M  +YG+ P I+H T +V LLGRAG L  A   I  
Sbjct: 523 TFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISN 582

Query: 607 IPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW--- 663
             F    +IWR+LL +C IH ++E G+L A  I++ EP   A++V+L N+Y  A      
Sbjct: 583 GIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLA 642

Query: 664 --------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYI 715
                   ++   KEPGLSWIE +  VH F AGD SH + + I   LE   M SR    I
Sbjct: 643 SKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLE--EMLSR----I 696

Query: 716 PDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKII 775
             L+    ++ + E+   +  HSEKLA+A  +  +P S+PIR++KNLR+C DCH+ +K+I
Sbjct: 697 EKLATTDTEISKREQN-LMNCHSEKLAVALGMIHLPQSAPIRVMKNLRVCRDCHSTMKLI 755

Query: 776 SKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           SK   REII+RD  RFHHF+DG CSC D+W
Sbjct: 756 SKSENREIILRDPIRFHHFRDGSCSCADYW 785



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 129/498 (25%), Positives = 244/498 (48%), Gaps = 28/498 (5%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           + +  SYA +L +C +   L+    +H   +  G    +F +N L+++Y K   + +A +
Sbjct: 106 DVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARR 165

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +FD   ER+ +S+ + + GY  +    E V +F+ + R G  LN FA  + +K     G 
Sbjct: 166 VFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGD 225

Query: 173 A--ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG-------LFN--- 220
              ++   V  CV K G DS+ F+ +A+ID ++  G +  A  +F         +FN   
Sbjct: 226 GTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMI 285

Query: 221 ------------DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCA 268
                       +   EAL  +S++++ G +P  FTF+ VL+AC     +   K  HG  
Sbjct: 286 AGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQV 345

Query: 269 LKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAV 328
           +K  ++ D ++  AL+DLY  SG + +  R F   PK D++ W+ M++   Q +L   A+
Sbjct: 346 IKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKAL 405

Query: 329 ELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVY 388
            LF     A + P+ FT  SV+ ACA++     G QI     + G      + N+ + +Y
Sbjct: 406 SLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMY 465

Query: 389 AKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYS 448
           A+ G ++ +   F E    + V+W+ +I  + Q G    A+  F +M++ +V   E+T+ 
Sbjct: 466 ARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFL 525

Query: 449 SVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDAR-LVFDMM 505
            VL AC+    ++ G++ +  T+  +Y +   + +   ++D+  + G + DA   + + +
Sbjct: 526 GVLTACSHGGLVDEGLRYY-ETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGI 584

Query: 506 NDWNEVSWNAMISGYSMH 523
              + V W ++++   +H
Sbjct: 585 FHADPVIWRSLLASCRIH 602



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 4/159 (2%)

Query: 447 YSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN 506
           Y  +LRAC SL               A     + + N L+  Y + G    AR + D M 
Sbjct: 14  YLHLLRACTSLRHAAAVHAHIARAHPA---ASLFLRNTLLAAYCRLGGPLPARRLLDEMP 70

Query: 507 DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEA 566
             N VS+N +I  YS  GL+   L+     ++ G   +  ++   L+ACS  G L  G A
Sbjct: 71  RRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAALAACSRAGHLRAGRA 130

Query: 567 YFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
                + + G+   +    S+VS+  + G + +A ++ +
Sbjct: 131 VHALAILD-GLSSGVFVSNSLVSMYSKCGEMGEARRVFD 168


>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
 gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
          Length = 903

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 281/778 (36%), Positives = 424/778 (54%), Gaps = 44/778 (5%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L++C +  DL    +IH  +++ G        N+LL++Y     +  A  LF+ M ER+ 
Sbjct: 135 LKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM-ERDL 193

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +S+   I     S     A+ LF  +  EG           L V   +  A     + + 
Sbjct: 194 VSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAKIRQAR---AIHSI 250

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--------------GLF--NDCFEEA 226
           V + G +    V TAL  A++  G ++ A++VFD              G +  +    EA
Sbjct: 251 VRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEA 310

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
              F++M   G  P+  T    + A  G  ++R  +  H CAL+   + D+ +  ALLD+
Sbjct: 311 ALLFARMLHEGIPPSKVTL---VNASTGCSSLRFGRMIHACALEKGLDRDIVLGNALLDM 367

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           YT+ G    AR +FE +P  + + W+ MIA  +Q      A+ELF RM+   +AP + T+
Sbjct: 368 YTRCGSPEEARHLFEGIPG-NAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATY 426

Query: 347 VSVLQACAT----MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF- 401
           +++L+A A+       +  G ++HS +V  G  S+  +  A++ +YA CG ++ +   F 
Sbjct: 427 LNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQ 486

Query: 402 --AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
             A   + + V+WN +I    Q G   +A+  F +M    V   ++T  +VL ACA  AA
Sbjct: 487 RGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAA 546

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN-DWNEVSWNAMIS 518
           L  G+ VH     +  + +V VA AL  MY +CGS+  AR +F+ +  + + V +NAMI+
Sbjct: 547 LTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIA 606

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
            YS +GL+ E LK+F  MQQ G RP+  +FV VLSACS+GGL ++G   F+SM  +YGI 
Sbjct: 607 AYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIA 666

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P  +HY   V +LGRAG L  A +LI  +  +P+V++W+ LLGAC  + +V+ GRL+   
Sbjct: 667 PSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSM 726

Query: 639 ILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRA 687
           + + +P DE+ +V+LSNI A A  W++AA            K+ G SWIE +  VH F A
Sbjct: 727 VRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKQAGKSWIEIKSRVHEFVA 786

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFAL 747
           GD SH     I   LE L+ + R+ GY+PD   VLR V E EKER L  HSE+LA+A  +
Sbjct: 787 GDRSHPRSEEIYRELERLHAEIREIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIALGV 846

Query: 748 FKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
                +  +R++KNLR+C DCH A K ISKIV +EI++RD HRFHHF DG CSCGD+W
Sbjct: 847 MS-SSTDTVRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 170/578 (29%), Positives = 273/578 (47%), Gaps = 34/578 (5%)

Query: 69  NDD--LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFV 126
            DD  L     IH +++  G  L+    N LL +Y+K   L D  ++F  +  R+  S+ 
Sbjct: 40  GDDRLLSQGRRIHARIVSLG--LEEELGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWT 97

Query: 127 TTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKL 186
           T I  YT   Q   A+ +F  + +EG   +   F A LK    +G       + A + + 
Sbjct: 98  TIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVES 157

Query: 187 GHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDC---------------FEEALNFFS 231
           G +  + +   L+  +  CGCV  A  +F+ +  D                 + AL  F 
Sbjct: 158 GLEGKSVLANLLLHIYGSCGCVASAMLLFERMERDLVSWNAAIAANAQSGDLDMALELFQ 217

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
           +M+  G +P   T    L  C     IR A++ H    ++  E  L V+ AL   Y + G
Sbjct: 218 RMQLEGVRPARITLVITLSVCA---KIRQARAIHSIVRESGLEQTLVVSTALASAYARLG 274

Query: 292 EISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQ 351
            +  A+ +F+   ++DV+ W+ M+  YAQ     +A  LF RM    + P++ T V+   
Sbjct: 275 HLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNAST 334

Query: 352 ACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
            C++   L  G  IH+  +  GL  D+ + NAL+D+Y +CG  E +  LF   P  N V+
Sbjct: 335 GCSS---LRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIPG-NAVS 390

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS----LAALEPGMQVH 467
           WNTMI G  Q G++ +A+ +F +M  E +     TY ++L A AS      A+  G ++H
Sbjct: 391 WNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLH 450

Query: 468 CLTVKANYDMDVVVANALIDMYAKCGSITDARLVFD---MMNDWNEVSWNAMISGYSMHG 524
              V   Y  +  +  A++ MYA CG+I +A   F    M +  + VSWNA+IS  S HG
Sbjct: 451 SRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHG 510

Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY 584
                L  F  M   G  PN +T V VL AC+    L +G       + + G+E  +   
Sbjct: 511 HGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEG-VIVHDHLRHSGMESNVFVA 569

Query: 585 TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           T++ S+ GR G L+ A ++ E +  +  V+I+ A++ A
Sbjct: 570 TALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAA 607



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 151/284 (53%), Gaps = 8/284 (2%)

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
            V +L+A      L  G +IH+ +V +GL  ++   N L+ +Y KC  + +  E+F+   
Sbjct: 32  LVRLLRAAGDDRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRLE 89

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
            R+  +W T+I  Y + G+  +A+ MF +M +E V    VT+ +VL+ACA L  L  G  
Sbjct: 90  VRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRS 149

Query: 466 VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGL 525
           +H   V++  +   V+AN L+ +Y  CG +  A L+F+ M + + VSWNA I+  +  G 
Sbjct: 150 IHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSGD 208

Query: 526 SAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYT 585
               L++F  MQ  G RP  +T V  LS C+    + Q  A   S+V   G+E  +   T
Sbjct: 209 LDMALELFQRMQLEGVRPARITLVITLSVCAK---IRQARA-IHSIVRESGLEQTLVVST 264

Query: 586 SMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNV 629
           ++ S   R GHLD+A ++ +    +  V+ W A+LGA   H ++
Sbjct: 265 ALASAYARLGHLDQAKEVFDRAA-ERDVVSWNAMLGAYAQHGHM 307


>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 648

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 240/577 (41%), Positives = 351/577 (60%), Gaps = 12/577 (2%)

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           P    +A +L++C+    I+  K  H       +  D  +A  L++LY     +S+AR +
Sbjct: 73  PTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLL 132

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL 359
           F+ +PK ++  W+ +I  YA       AV+L+ +M    + P+ FTF  VL+ACA +  +
Sbjct: 133 FDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAI 192

Query: 360 DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGY 419
           + G +IH  VV+ G   DVFV  AL+D+YAKCG + ++ E+F +   R+ V WN+M+  Y
Sbjct: 193 EHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAY 252

Query: 420 VQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDV 479
            Q G     + + S+M+   +  TE T  + + A A  AAL  G ++H L+ +  ++   
Sbjct: 253 SQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHD 312

Query: 480 VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
            V  AL+DMYAKCGS+  AR +F+ +     VSWNAMI+GY+MHG + E L +F+ M  R
Sbjct: 313 KVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEM-NR 371

Query: 540 GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDK 599
             +P+++TFVGVLSACS+GGLLE+G  +F++M+ +Y I+P ++HYT MV LLG +G LD+
Sbjct: 372 VAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDE 431

Query: 600 AAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAM 659
           A  LI  +   P   +W ALL +C IH NVE+G ++ + +++ EP+D   +V+LSNIYA 
Sbjct: 432 AYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQ 491

Query: 660 ARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMK 708
           A  WE  A            K    SWIE +  VH F +GDTSH   + I   LE +   
Sbjct: 492 AGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGL 551

Query: 709 SRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDC 768
            ++AGY P   +V  DV +DEK   +  HSE+LA+AF L   PP + + I KNLRIC DC
Sbjct: 552 MKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLITKNLRICEDC 611

Query: 769 HTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           H AIK ISKI +REI +RDV+R+HHF+DG CSCGD+W
Sbjct: 612 HVAIKFISKITEREITVRDVNRYHHFKDGVCSCGDYW 648



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 196/422 (46%), Gaps = 23/422 (5%)

Query: 124 SFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPF--AFTAFLKVLVSMGWAELCPCVFA 181
           SF ++   +  +   ++A+   S  H E   L P    + + L+  ++    +    + A
Sbjct: 40  SFTSSAPQFDNNQTHLKAIPSCSNPHAESTCLTPTYSNYASLLQSCIARKAIKPGKQLHA 99

Query: 182 CVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEE 225
            V   G   +  + T L++ + VC  +  AR +FD +                +N  +E 
Sbjct: 100 QVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEA 159

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           A+  + QM   G  P+NFTF FVLKAC  L  I   +  H   ++T +E D++V  AL+D
Sbjct: 160 AVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALID 219

Query: 286 LYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFT 345
           +Y K G + +AR +F+++  +D + W+ M+A Y+Q       + L   M    + P + T
Sbjct: 220 MYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEAT 279

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
            V+ + A A    L  G ++H L  R    S   V  AL+D+YAKCG +  +  LF    
Sbjct: 280 LVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLG 339

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
            +  V+WN MI GY   G   +A+ +F +M     P   +T+  VL AC+    LE G  
Sbjct: 340 VKRVVSWNAMITGYAMHGHATEALDLFEEMNRVAKP-DHITFVGVLSACSHGGLLEEGWM 398

Query: 466 VHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSM 522
                ++ +Y +D  V +   ++D+    G + +A  L+  M    +   W A+++   +
Sbjct: 399 FFETMIR-DYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKI 457

Query: 523 HG 524
           H 
Sbjct: 458 HA 459



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 141/539 (26%), Positives = 226/539 (41%), Gaps = 70/539 (12%)

Query: 39  CSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLL 98
           CSN        + +  N   YA+ LQSCI    ++    +H QV   G   D      L+
Sbjct: 61  CSNPHAESTCLTPTYSN---YASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLV 117

Query: 99  NVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPF 158
           N+Y   + L  A  LFD +P+ N   +   I+GY  +  +  AV L+  +   G   + F
Sbjct: 118 NLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNF 177

Query: 159 AFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL 218
            F   LK   ++   E    +   V + G + + FVG ALID ++ CGCV  AR+VFD +
Sbjct: 178 TFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKI 237

Query: 219 F----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAK 262
                            N   +  L+  S+M   G +P   T    + A      +   +
Sbjct: 238 LVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGR 297

Query: 263 SAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTD 322
             HG + +  +E    V  AL+D+Y K G +  AR +FE +  K V+ W+ MI  YA   
Sbjct: 298 ELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHG 357

Query: 323 LSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSN 382
            + +A++LF  M +    P+  TFV VL AC+                  GLL + ++  
Sbjct: 358 HATEALDLFEEMNRV-AKPDHITFVGVLSACS----------------HGGLLEEGWMF- 399

Query: 383 ALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPA 442
                       E  +  +   P   H T    ++G+    +    +IM  K+L    P 
Sbjct: 400 -----------FETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVL----PD 444

Query: 443 TEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGS-------- 494
           + V + ++L +C   A +E G       ++   D D      L ++YA+ G         
Sbjct: 445 SGV-WGALLNSCKIHANVELGEIALERLIELEPD-DAGNYVILSNIYAQAGKWEGVAKLR 502

Query: 495 --ITDARLVFDMMNDWNEV--SWNAMISGYSMHGLSAEVL----KVFDLMQQRGWRPNN 545
             +TD RL   +   W EV    +A +SG + H LS E+     +V  LM++ G+ P+ 
Sbjct: 503 KLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPST 561



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 145/290 (50%), Gaps = 2/290 (0%)

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           + P    + S+LQ+C   + +  G Q+H+ V   G   D  ++  L+++Y  C  + ++ 
Sbjct: 71  LTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSAR 130

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            LF   PK N   WN +I GY   G    A+ ++ +M +  +     T+  VL+ACA+L+
Sbjct: 131 LLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALS 190

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           A+E G ++H   V+  ++ DV V  ALIDMYAKCG +  AR VFD +   + V WN+M++
Sbjct: 191 AIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLA 250

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
            YS +G     L +   M   G RP   T V  +SA ++   L QG      +      E
Sbjct: 251 AYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRE-LHGLSWRQEFE 309

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
              +  T++V +  + G +  A  L E +  +  V+ W A++    +H +
Sbjct: 310 SHDKVKTALVDMYAKCGSVRVARNLFERLGVK-RVVSWNAMITGYAMHGH 358


>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
 gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 743

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 271/793 (34%), Positives = 412/793 (51%), Gaps = 95/793 (11%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +S+ Y  +L+ C +  +      +HC++++     + F  N L+N Y KL  L +A  +F
Sbjct: 4   SSNYYTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVF 63

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D +P+                                    N F++   L     +G+ +
Sbjct: 64  DHIPQP-----------------------------------NLFSWNTLLSAYSKLGYLQ 88

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMR 234
               VF  +    HD  ++   +L+  ++  G +  + +V++ +  D    ++N      
Sbjct: 89  DMQRVFDSM--PNHDVVSW--NSLLSGYAGNGLISESVRVYNMMLKD---GSVNL----- 136

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
                 N  TF+ +L        + + +  HG   K  Y+  L+V   L+D+Y K+G I+
Sbjct: 137 ------NRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFIN 190

Query: 295 NARRIFEE-------------------------------MPKKDVIPWSFMIARYAQTDL 323
           +A RIFEE                               MP+KD I W+ +I    Q  L
Sbjct: 191 DANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGL 250

Query: 324 SIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNA 383
             +AV+ F  M       +QFTF SVL AC     LD G QIH+ ++R     ++FV +A
Sbjct: 251 FKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSA 310

Query: 384 LMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPAT 443
           L+D+Y KC  ++ +  +F +   +N ++W  M+VGY Q G   +A+ +F  M   ++   
Sbjct: 311 LLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPD 370

Query: 444 EVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFD 503
           + T  SV+ +CA+LA+LE G Q H   + +     V V+NALI +Y KCGS+  A  +F 
Sbjct: 371 DFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFH 430

Query: 504 MMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQ 563
            M   +EVSW A++SGY+  G + E + +F+ M   G  P+ +TFVGVLSACS  GL+E+
Sbjct: 431 EMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEK 490

Query: 564 GEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGAC 623
           G  YF+ MV  + I P  +HYT M+ LL RAG L++A   I  +PF P  + W  LL +C
Sbjct: 491 GYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSC 550

Query: 624 IIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPG 672
            ++ N+EIG+ +A+ +   EP++ A+++LLS+IYA    W+  A            KEPG
Sbjct: 551 RLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPG 610

Query: 673 LSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKER 732
            SWI+ +  VH F A D S    + I   LE L +K  + GY+PD+S VL DV + EK +
Sbjct: 611 HSWIKYKNKVHIFSADDRSSPFSDQIYAKLESLYLKMIEEGYVPDMSFVLHDVEKSEKIK 670

Query: 733 YLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFH 792
            L  HSEKLA+AF L  +P    IR++KNLR+C DCH A K IS+I QREI++RD  RFH
Sbjct: 671 MLNHHSEKLAIAFGLLFIPDGLQIRVVKNLRVCGDCHNATKYISRITQREILVRDAVRFH 730

Query: 793 HFQDGCCSCGDFW 805
            F+DG CSCGDFW
Sbjct: 731 LFKDGVCSCGDFW 743


>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
 gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
          Length = 586

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 236/575 (41%), Positives = 355/575 (61%), Gaps = 17/575 (2%)

Query: 243 FTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEE 302
            T++ ++K CL    ++ A+  H       YE   ++   L+++Y K G +  AR +F+E
Sbjct: 17  ITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDE 76

Query: 303 MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG 362
           MP ++V+ W+ MI+ Y+ ++L+  A++    M +  V PN +T+ SVL+AC   +GL   
Sbjct: 77  MPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRAC---DGLLNL 133

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
            Q+H  +++VGL SDVFV +AL+D Y+K G   +++ +F E    + V WN++I G+ Q 
Sbjct: 134 RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQN 193

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
            +  + + ++ +M      A + T +SVLRAC  LA LE G QVH   +K  YD D+++ 
Sbjct: 194 SDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILN 251

Query: 483 NALIDMYAKCGSITDARLVFD-MMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW 541
           NAL+DMY KCGS+ DA L+F  MM + + +SW+ MI+G + +G SA+ LK+F+ M+ +G 
Sbjct: 252 NALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGP 311

Query: 542 RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAA 601
           +PN +T +GVL ACS+ GL+  G  YF+SM  ++GI+P  EHY  ++ LLGRAG LD+A 
Sbjct: 312 KPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAV 371

Query: 602 KLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMAR 661
           KLI  +  +P  + WR LLGAC +H NV++   +A+ IL  +P D  T++LLSNIYA ++
Sbjct: 372 KLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGTYILLSNIYANSQ 431

Query: 662 SWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSR 710
            WE  A            K+PG SWIE    VH F  GD SH  +  I+  L  L  +  
Sbjct: 432 KWEDVAEVRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIKRELSQLIQRLM 491

Query: 711 KAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHT 770
           + GY+PD + VL+D+  ++ E  L  HSEKLA+ F L  +P    I I KNLRIC DCH 
Sbjct: 492 RLGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPNQKTIHIRKNLRICGDCHI 551

Query: 771 AIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
             K++S++  R I+IRD  R+HHF+ G CSCGD+W
Sbjct: 552 FAKLVSQLENRVIVIRDPIRYHHFRGGVCSCGDYW 586



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 200/409 (48%), Gaps = 25/409 (6%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +Y+  ++ C+    +Q A  +H  V   G     F  N L+N+YVK   L +A  LFDEM
Sbjct: 18  TYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEM 77

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
           P+RN +S+ T I  Y+ S+   +A+     + REG   N + +++ L+     G   L  
Sbjct: 78  PDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLR--ACDGLLNLRQ 135

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------ND 221
            +   + K+G +S+ FV +ALID +S  G    A  VF+ +                 N 
Sbjct: 136 -LHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNS 194

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
             +E L+ + +M+   F  +  T   VL+AC GL  + + +  H   LK  Y+ DL +  
Sbjct: 195 DGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNN 252

Query: 282 ALLDLYTKSGEISNARRIFEE-MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
           ALLD+Y K G + +A  +F   M +KDVI WS MIA  AQ   S DA++LF  M+     
Sbjct: 253 ALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPK 312

Query: 341 PNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
           PN  T + VL AC+    ++ G     S+    G+         ++D+  + G+++ +V+
Sbjct: 313 PNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVK 372

Query: 400 LFAE-SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTY 447
           L  E + + + VTW  +++G  ++ +     I  +K + +  PA   TY
Sbjct: 373 LIHEMNHEPDAVTWR-ILLGACRVHKNVDLAIYAAKEILKLDPADAGTY 420



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 136/296 (45%), Gaps = 20/296 (6%)

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           M +  ++ +  T+  +++ C     +     +H  V   G     F+ N L+++Y K G 
Sbjct: 7   MHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGL 66

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           ++ +  LF E P RN V+W TMI  Y       KA+     ML E V     TYSSVLRA
Sbjct: 67  LDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRA 126

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
           C  L  L    Q+H   +K   + DV V +ALID Y+K G   DA  VF+ M   + V W
Sbjct: 127 CDGLLNLR---QLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVW 183

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE-------A 566
           N++I G++ +    E L ++  M++  +  +  T   VL AC+   LLE G         
Sbjct: 184 NSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK 243

Query: 567 YFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           Y + ++ N           +++ +  + G L+ A  L   +  +  V+ W  ++  
Sbjct: 244 YDQDLILN----------NALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAG 289


>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
 gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
          Length = 935

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 280/801 (34%), Positives = 426/801 (53%), Gaps = 55/801 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N H+    + +C    +L     IH Q+  +    +    N L+++Y K   L DA + F
Sbjct: 140 NCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAF 199

Query: 115 DEMP---ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHEL-NPFAFTAFLKVLVSM 170
           D +P   +R+ +++   I  +  +    EA+ LF  + R+G    N   F + L   V  
Sbjct: 200 DRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEA 259

Query: 171 GWAEL--CPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF------------- 215
           G   L     +   +   G +  AFV TAL+D++   G ++ A +VF             
Sbjct: 260 GLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLV 319

Query: 216 --DGLFNDCFE-----EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCA 268
               + + C++     E+L  F  M   G KP+  T   VL AC  L       SA    
Sbjct: 320 TCSAMISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQV----GSATAFV 375

Query: 269 LKTCYEM-----DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDL 323
           L+   E+     D  +   LL  Y +S ++  AR  F+ +   DV+ W+ M A Y Q   
Sbjct: 376 LEQAMEVVSATRDNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHR 435

Query: 324 SIDAVELFCRMRQAFVAPNQFTFVSVLQACAT---MEGLDLGNQIHSLVVRVGLLSDVFV 380
           S +A+ LF RM    V P+  TF++ L ACA         +G +I SL+   GL  D  V
Sbjct: 436 SREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAV 495

Query: 381 SNALMDVYAKCGRMENSVELFAE-SP-KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE 438
           +NA +++YAKCG + ++  +F   SP +R+ +TWN+M+  Y   G   +A  +F  M  E
Sbjct: 496 ANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAE 555

Query: 439 Q-VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITD 497
           + V   +VT+ +VL A  S  ++  G ++H   V   ++ D V+ NAL++MYAKCGS+ D
Sbjct: 556 KLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDD 615

Query: 498 ARLVFDMMNDWNE--VSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSAC 555
           A+ +FD  +   E  ++W ++I+GY+ +G +   LK+F  MQQ+G RPN++TF+  L+AC
Sbjct: 616 AQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISALTAC 675

Query: 556 SNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMI 615
           ++GG LEQG      M  ++GI P  +H++ +V LLGR G LD+A KL+E    Q  V+ 
Sbjct: 676 NHGGKLEQGCELLSGMTPDHGILPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QADVIT 734

Query: 616 WRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS------- 668
           W ALL AC     +E G   A+ I+  +PE  +++++L+++YA A  W +AA+       
Sbjct: 735 WMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLD 794

Query: 669 ----KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRD 724
                +PG S +E    +H F AGD SH     I   LE L+   + AGY+ D   VL D
Sbjct: 795 KGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLVLHD 854

Query: 725 VREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREII 784
           V ++ KER L  HSEKLA+AF L   P  SP+R+IKNLR+C DCHTA K+ISK+  R+I+
Sbjct: 855 VSQEHKERLLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISKVTGRDIL 914

Query: 785 IRDVHRFHHFQDGCCSCGDFW 805
           +RD  R+HHF  G CSCGD+W
Sbjct: 915 MRDSSRYHHFTSGTCSCGDYW 935



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 131/448 (29%), Positives = 210/448 (46%), Gaps = 35/448 (7%)

Query: 197 ALIDAF-SVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGL 255
           AL D F SV  C    R   +    D   +A+  F +M     +PN      ++ AC  L
Sbjct: 101 ALADRFASVYSCTAMIRAWMEHGRPD---KAMELFDRME---VRPNCHALIALVNACSCL 154

Query: 256 DTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP---KKDVIPWS 312
             +   +  H       +E +  +  AL+ +Y+K G + +A++ F+ +P   K+DV+ W+
Sbjct: 155 GNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWN 214

Query: 313 FMIARYAQTDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQAC--ATMEGLDLGNQIHSLV 369
            MI+ + +   + +A++LF  M R     PN  TFVSVL +C  A +  L+    IH  +
Sbjct: 215 AMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRI 274

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELF----AESPKRNHVTWNTMIVGYVQLGEV 425
           V  G+  + FV  AL+D Y K G ++++ E+F     E P  + VT + MI    Q G  
Sbjct: 275 VGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWP 334

Query: 426 GKAMIMFSKMLEEQVPATEVTYSSVLRACASLA-------ALEPGMQVHCLTVKANYDMD 478
            +++ +F  M  E    + VT  SVL AC+ L         LE  M+V   T       D
Sbjct: 335 QESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSAT------RD 388

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
            V+   L+  YA+   +  AR  FD +   + VSWNAM + Y  H  S E L +F+ M  
Sbjct: 389 NVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLL 448

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGEAYFK---SMVANYGIEPCIEHYTSMVSLLGRAG 595
            G RP+  TF+  L+AC+     +   A  K   S++   G+E       + +++  + G
Sbjct: 449 EGVRPSVATFITALTACA-AYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCG 507

Query: 596 HLDKAAKLIEGI-PFQPSVMIWRALLGA 622
            L  A  + E I P +   + W ++L A
Sbjct: 508 SLADARAVFERISPARRDCITWNSMLAA 535



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 193/403 (47%), Gaps = 32/403 (7%)

Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL----YVAVALLDLYTKSGEISNARRI 299
           T+  +L+AC  L  ++  +  H   L     +DL    ++A  L+ ++ K G ++ A  +
Sbjct: 45  TYGCLLQACGRLRALKQGQRLHAHILS--RRIDLHNHSFLASDLIVMHAKCGNLAEAEAL 102

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL 359
            +      V   + MI  + +      A+ELF RM    V PN    ++++ AC+ +  L
Sbjct: 103 ADRFAS--VYSCTAMIRAWMEHGRPDKAMELFDRME---VRPNCHALIALVNACSCLGNL 157

Query: 360 DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP---KRNHVTWNTMI 416
             G +IHS +       +  + NAL+ +Y+KCG + ++ + F   P   KR+ VTWN MI
Sbjct: 158 AAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMI 217

Query: 417 VGYVQLGEVGKAMIMFSKMLEEQV-PATEVTYSSVLRAC--ASLAALEPGMQVHCLTVKA 473
             +++ G   +A+ +F  M  +   P   VT+ SVL +C  A L +LE    +H   V A
Sbjct: 218 SAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGA 277

Query: 474 NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE----VSWNAMISGYSMHGLSAEV 529
             + +  V  AL+D Y K GS+ DA  VF    D       V+ +AMIS    +G   E 
Sbjct: 278 GIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQES 337

Query: 530 LKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY----- 584
           L++F  M   G +P+ +T V VL+ACS   +L+ G A   + V    +E           
Sbjct: 338 LRLFFAMNLEGTKPSGVTLVSVLNACS---MLQVGSA--TAFVLEQAMEVVSATRDNVLG 392

Query: 585 TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
           T++++   R+  L +A    + I   P V+ W A+  A + H+
Sbjct: 393 TTLLTTYARSNDLPRARATFDAIQ-SPDVVSWNAMAAAYLQHH 434



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 96/194 (49%), Gaps = 10/194 (5%)

Query: 433 SKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM--DVVVANALIDMYA 490
           S+++ +Q      TY  +L+AC  L AL+ G ++H   +    D+     +A+ LI M+A
Sbjct: 32  SRIIADQGHCAPSTYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHA 91

Query: 491 KCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVG 550
           KCG++ +A  + D     +  S  AMI  +  HG   + +++FD M+    RPN    + 
Sbjct: 92  KCGNLAEAEALADRFA--SVYSCTAMIRAWMEHGRPDKAMELFDRMEV---RPNCHALIA 146

Query: 551 VLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIP-- 608
           +++ACS  G L  G     S +++   E       +++S+  + G L  A +  + +P  
Sbjct: 147 LVNACSCLGNLAAGR-RIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRA 205

Query: 609 FQPSVMIWRALLGA 622
            +  V+ W A++ A
Sbjct: 206 SKRDVVTWNAMISA 219


>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
 gi|238013832|gb|ACR37951.1| unknown [Zea mays]
 gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
          Length = 745

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 261/730 (35%), Positives = 394/730 (53%), Gaps = 69/730 (9%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           +LF  N LL+       L D   LF  M +R+T+S+   I G++       AV L+ TL 
Sbjct: 71  NLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLL 130

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
           R G  + P   T                                  +A++ A S  G   
Sbjct: 131 RAGSSVRPSRITM---------------------------------SAMVMAASALGDRA 157

Query: 210 FARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCAL 269
             R+               F  Q+  +GF  N F  + ++     +  I       G A 
Sbjct: 158 LGRQ---------------FHCQILRLGFGVNAFVGSPLVGMYAKMGLI-------GDAK 195

Query: 270 KTCYEMDLYVAVALLDLYT---KSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSID 326
           +   EMD    V    + T   +   +  ARR+FE M  +D I W+ M+  + Q  L   
Sbjct: 196 RVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQ 255

Query: 327 AVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMD 386
           A+  F RMR   +A +Q+TF S+L AC  +  L+ G QIH+ ++R     +VFV +AL+D
Sbjct: 256 ALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVD 315

Query: 387 VYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVT 446
           +Y+KC  ++ +   F     +N ++W  +IVGY Q G   +A+ +FS+M  + +   + T
Sbjct: 316 MYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFT 375

Query: 447 YSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN 506
             SV+ +CA+LA+LE G Q HCL + +     + V+NAL+ +Y KCGSI DA  +FD M 
Sbjct: 376 LGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEML 435

Query: 507 DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEA 566
             ++VSW A+++GY+  G + E + +F+ M  +  +P+ +TF+GVLSACS  G +E+G +
Sbjct: 436 FHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCS 495

Query: 567 YFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH 626
           YF SM  ++GI P  +HYT M+ L  R+G L +A + I+ +P  P  + W  LL AC + 
Sbjct: 496 YFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLR 555

Query: 627 NNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSW 675
            ++EIG+ +A+++L+ +P++ A++VLL +++A   +W + A            KEPG SW
Sbjct: 556 GDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKKEPGCSW 615

Query: 676 IENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLW 735
           I+ +  VH F A D SH     I   LEWLN K  + GY PD+S+VL DV + +K   + 
Sbjct: 616 IKYKNKVHIFSADDQSHPFSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVHMVS 675

Query: 736 VHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQ 795
            HSEKLA+AF L  +P   PIRI+KNLR+CVDCH A K+ISKI  R+I++RD  RFH F 
Sbjct: 676 HHSEKLAIAFGLMFVPHEMPIRIVKNLRVCVDCHNATKLISKITGRDILVRDAVRFHKFS 735

Query: 796 DGCCSCGDFW 805
           +G CSCGDFW
Sbjct: 736 NGVCSCGDFW 745



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 107/431 (24%), Positives = 197/431 (45%), Gaps = 51/431 (11%)

Query: 71  DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE-------------- 116
           D       HCQ+L+ G  ++ F  + L+ +Y K+  + DA ++FDE              
Sbjct: 155 DRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMIT 214

Query: 117 -----------------MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFA 159
                            M +R+ I++ T + G+T +    +A+  F  +  +G  ++ + 
Sbjct: 215 GLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYT 274

Query: 160 FTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF 219
           F + L    ++   E    + A + +  +D N FVG+AL+D +S C  ++ A   F  + 
Sbjct: 275 FGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMS 334

Query: 220 ----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKS 263
                           N C EEA+  FS+M+  G  P++FT   V+ +C  L ++     
Sbjct: 335 CKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQ 394

Query: 264 AHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDL 323
            H  AL +     + V+ AL+ LY K G I +A R+F+EM   D + W+ ++  YAQ   
Sbjct: 395 FHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGR 454

Query: 324 SIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSN 382
           + + ++LF +M    V P+  TF+ VL AC+    ++ G +  HS+    G++       
Sbjct: 455 AKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYT 514

Query: 383 ALMDVYAKCGRMENSVELFAESPKR-NHVTWNTMIVGYVQLGEVGKAMIMFSKMLE--EQ 439
            ++D+Y++ GR++ + E   + P   + + W T++      G++         +LE   Q
Sbjct: 515 CMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGQWAAENLLEIDPQ 574

Query: 440 VPATEVTYSSV 450
            PA+ V   S+
Sbjct: 575 NPASYVLLCSM 585



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 127/296 (42%), Gaps = 34/296 (11%)

Query: 47  ITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNR 106
           + F     + +++ + L +C     L+    IH  +++     ++F  + L+++Y K   
Sbjct: 263 MRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRS 322

Query: 107 LPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV 166
           +  A   F  M  +N IS+   I GY  +    EAV +FS + R+G + + F   + +  
Sbjct: 323 IKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISS 382

Query: 167 ---LVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG-LFNDC 222
              L S+       C+ A V  L H     V  AL+  +  CG +E A ++FD  LF+D 
Sbjct: 383 CANLASLEEGAQFHCL-ALVSGLMH--YITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQ 439

Query: 223 F---------------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGC 267
                           +E ++ F +M A   KP+  TF  VL AC      R      GC
Sbjct: 440 VSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSAC-----SRAGFVEKGC 494

Query: 268 ALKTCYEMDLYVA------VALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
           +     + D  +         ++DLY++SG +  A    ++MP   D I W  +++
Sbjct: 495 SYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLS 550



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 53/248 (21%), Positives = 89/248 (35%), Gaps = 27/248 (10%)

Query: 7   YKTFSCKQLTHQSK--INAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQ 64
           ++  SCK +   +   +     G S +A     +       P  F++         + + 
Sbjct: 330 FRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTL--------GSVIS 381

Query: 65  SCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTIS 124
           SC     L+     HC  L  G    +  +N L+ +Y K   + DA +LFDEM   + +S
Sbjct: 382 SCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVS 441

Query: 125 FVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVY 184
           +   + GY    +  E + LF  +  +  + +   F   L      G+ E       C Y
Sbjct: 442 WTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEK-----GCSY 496

Query: 185 KLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFT 244
              H      G   ID    C    ++R       +   +EA  F  QM      P+   
Sbjct: 497 F--HSMQKDHGIVPIDDHYTCMIDLYSR-------SGRLKEAEEFIKQMP---MHPDAIG 544

Query: 245 FAFVLKAC 252
           +  +L AC
Sbjct: 545 WGTLLSAC 552


>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
 gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
          Length = 903

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 282/778 (36%), Positives = 425/778 (54%), Gaps = 44/778 (5%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L++C +  DL    +IH  +++ G        N+LL++Y     +  A  LF++M ER+ 
Sbjct: 135 LKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM-ERDL 193

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +S+   I     S     A+ LF  +  EG           L V  ++  A+    +   
Sbjct: 194 VSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCATIRQAQ---AIHFI 250

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--------------GLF--NDCFEEA 226
           V + G +    V TAL  A++  G +  A++VFD              G +  +    EA
Sbjct: 251 VRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEA 310

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
              F++M   G  P+  T    + A  G  ++R  +  HGCAL+   + D+ +  ALLD+
Sbjct: 311 ALLFARMLHEGISPSKVTL---VNASTGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDM 367

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           YT+ G    AR +F+ +P  + + W+ MIA  +Q      AVELF RM+   +AP + T+
Sbjct: 368 YTRCGSPEEARHLFKRIPC-NAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATY 426

Query: 347 VSVLQACAT----MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF- 401
           +++L+A A+       +  G ++HS +V  G  S+  +  A++ +YA CG ++ +   F 
Sbjct: 427 LNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQ 486

Query: 402 --AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
             A   + + V+WN +I    Q G   +A+  F +M    V   ++T  +VL ACA  AA
Sbjct: 487 RGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAA 546

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN-DWNEVSWNAMIS 518
           L  G  VH     +  + ++ VA AL  MY +CGS+  AR +F+ +  + + V +NAMI+
Sbjct: 547 LTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIA 606

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
            YS +GL+ E LK+F  MQQ G RP+  +FV VLSACS+GGL ++G   F+SM  +YGI 
Sbjct: 607 AYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIA 666

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P  +HY   V +LGRAG L  A +LI  +  +P+V++W+ LLGAC  + +V+ GRL+   
Sbjct: 667 PSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSM 726

Query: 639 ILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRA 687
           + + +P DE+ +V+LSNI A A  W++AA            KE G SWIE +  VH F A
Sbjct: 727 VRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKEAGKSWIEIKSRVHEFVA 786

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFAL 747
           GD SH     I   LE L+ + R+ GY+PD   VLR V E EKER L  HSE+LA+A  +
Sbjct: 787 GDRSHPRSEEIYRELERLHAEIREIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIALGV 846

Query: 748 FKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
                +  +R++KNLR+C DCH A K ISKIV +EI++RD HRFHHF DG CSCGD+W
Sbjct: 847 MS-SSTDTVRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903



 Score =  269 bits (687), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 173/578 (29%), Positives = 274/578 (47%), Gaps = 34/578 (5%)

Query: 69  NDD--LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFV 126
            DD  L     IH +++  G  L+    N LL +Y+K   L D  ++F  +  R+  S+ 
Sbjct: 40  GDDRLLSQGRRIHARIVSLG--LEEELGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWT 97

Query: 127 TTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKL 186
           T I  YT   Q   A+G+F  + +EG   +   F A LK    +G       + A + + 
Sbjct: 98  TIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVES 157

Query: 187 GHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFE---------------EALNFFS 231
           G    + +   L+  +  CGCV  A  +F+ +  D                   AL  F 
Sbjct: 158 GLKGKSVLANLLLHIYGSCGCVASAMLLFEKMERDLVSWNAAIAANAQSGDLGIALELFQ 217

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
           +M+  G +P   T    L  C    TIR A++ H    ++  E  L V+ AL   Y + G
Sbjct: 218 RMQLEGVRPARITLVIALTVCA---TIRQAQAIHFIVRESGLEQTLVVSTALASAYARLG 274

Query: 292 EISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQ 351
            +  A+ +F+   ++DV+ W+ M+  YAQ     +A  LF RM    ++P++ T V+   
Sbjct: 275 HLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNAST 334

Query: 352 ACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
            C++   L  G  IH   +  GL  D+ + NAL+D+Y +CG  E +  LF   P  N V+
Sbjct: 335 GCSS---LRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIPC-NAVS 390

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS----LAALEPGMQVH 467
           WNTMI G  Q G++ +A+ +F +M  E +     TY ++L A AS      A+  G ++H
Sbjct: 391 WNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLH 450

Query: 468 CLTVKANYDMDVVVANALIDMYAKCGSITDARLVFD---MMNDWNEVSWNAMISGYSMHG 524
              V   Y  +  +  A++ MYA CG+I +A   F    M +  + VSWNA+IS  S HG
Sbjct: 451 SRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHG 510

Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY 584
                L  F  M   G  PN +T V VL AC+    L +GE      + + G+E  +   
Sbjct: 511 HGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGE-IVHDHLRHSGMESNLFVA 569

Query: 585 TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           T++ S+ GR G L+ A ++ E +  +  V+I+ A++ A
Sbjct: 570 TALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAA 607



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 149/284 (52%), Gaps = 8/284 (2%)

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
            V +L+A      L  G +IH+ +V +GL  ++   N L+ +Y KC  + +  E+F+   
Sbjct: 32  LVRLLRAAGDDRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRLE 89

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
            R+  +W T+I  Y + G+  +A+ MF +M +E V    VT+ +VL+ACA L  L  G  
Sbjct: 90  VRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRS 149

Query: 466 VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGL 525
           +H   V++      V+AN L+ +Y  CG +  A L+F+ M + + VSWNA I+  +  G 
Sbjct: 150 IHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAANAQSGD 208

Query: 526 SAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYT 585
               L++F  MQ  G RP  +T V  L+ C+    + Q +A    +V   G+E  +   T
Sbjct: 209 LGIALELFQRMQLEGVRPARITLVIALTVCAT---IRQAQA-IHFIVRESGLEQTLVVST 264

Query: 586 SMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNV 629
           ++ S   R GHL +A ++ +    +  V+ W A+LGA   H ++
Sbjct: 265 ALASAYARLGHLYQAKEVFDRAA-ERDVVSWNAMLGAYAQHGHM 307



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 189/421 (44%), Gaps = 34/421 (8%)

Query: 56  SHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFD 115
           S S  T + +      L+    IH   L+KG   D+   N LL++Y +     +A  LF 
Sbjct: 323 SPSKVTLVNASTGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFK 382

Query: 116 EMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAEL 175
            +P  N +S+ T I G +   Q   AV LF  +  EG  + P   T +L +L ++     
Sbjct: 383 RIPC-NAVSWNTMIAGSSQKGQMKRAVELFQRMQLEG--MAPVRAT-YLNLLEAVASNPE 438

Query: 176 CPCVFACVYKL-------GHDSNAFVGTALIDAFSVCGCVEFARKVFD-GLFNDCFE--- 224
                A   KL       G+ S   +GTA++  ++ CG ++ A   F  G   D  +   
Sbjct: 439 EARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVS 498

Query: 225 ---------------EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCAL 269
                           AL FF +M   G  PN  T   VL AC G   +   +  H    
Sbjct: 499 WNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLR 558

Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIARYAQTDLSIDAV 328
            +  E +L+VA AL  +Y + G + +AR IFE++  ++DV+ ++ MIA Y+Q  L+ +A+
Sbjct: 559 HSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEAL 618

Query: 329 ELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI-HSLVVRVGLLSDVFVSNALMDV 387
           +LF RM+Q    P++ +FVSVL AC+     D G +I  S+    G+          +DV
Sbjct: 619 KLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDV 678

Query: 388 YAKCGRMENSVELF-AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVT 446
             + G + ++ EL      K   + W T++    +  +V +  +  S M+ E  P  E  
Sbjct: 679 LGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANS-MVRELDPGDESA 737

Query: 447 Y 447
           Y
Sbjct: 738 Y 738


>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 823

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 272/767 (35%), Positives = 417/767 (54%), Gaps = 72/767 (9%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPE-RNTISFVTTIQGYTVSSQFVEAVGLFSTL 148
           D    N LL +Y K   +  A ++FD M   R+ +S+       T +    EA+ L   +
Sbjct: 78  DALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLGEM 137

Query: 149 HREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC----------------VYKLGH-DSN 191
              G  L P AFT             LC    AC                  K G   ++
Sbjct: 138 LESG--LRPNAFT-------------LCAAAHACFPGELFRSSGGTVLGFAIKTGFWGTD 182

Query: 192 AFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRA 235
             VG ALID F+  G +  ARKVF+GL                   C  +A+  F  M  
Sbjct: 183 VSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLE 242

Query: 236 VGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK---SGE 292
            GF+P+ +T + ++ AC    +  + +  H   L+     D  V+  L+D+YTK      
Sbjct: 243 DGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQS 302

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQ-TDLSIDAVELFCRMRQAFVAPNQFTFVSVLQ 351
           +  AR++F+ MP  +V+ W+ +I+ Y Q      +AVEL C M    + PN  T+ S+L+
Sbjct: 303 MECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLK 362

Query: 352 ACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
           ACA +   D G QIH+ V++  + +   V NAL+ +YA+ G ME + + F +  +RN ++
Sbjct: 363 ACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLS 422

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEE-QVPATEVTYSSVLRACASLAALEPGMQVHCLT 470
            ++       +GE G++   +S  +E   V  +  T++S+L A A++     G Q+H L+
Sbjct: 423 TSS------DIGETGRSNASWSSQIESMDVGVSTFTFASLLSAAATVGLPTKGQQLHALS 476

Query: 471 VKANYDMDVVVANALIDMYAKCGSITDARLVFDMM-NDWNEVSWNAMISGYSMHGLSAEV 529
           +K  ++ D  ++N+L+ MY++CG + DA   FD M +D N +SW ++IS  + HG +   
Sbjct: 477 IKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERA 536

Query: 530 LKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVS 589
           L +F  M   G +PN++T++ VLSACS+ GL+++G+ YF+SM  ++ + P +EHY  MV 
Sbjct: 537 LSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVD 596

Query: 590 LLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEAT 649
           LL R+G + +A + I  +P +   ++W+ LLGAC  + N+EIG ++A+H++D EP+D A 
Sbjct: 597 LLARSGLVQEALEFINEMPCKADALVWKTLLGACRTYENIEIGEIAARHVIDLEPQDPAP 656

Query: 650 HVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNII 698
           +VLLSN+YA    W++ A           SKE GLSW+     +H FRAGDTSH     I
Sbjct: 657 YVLLSNLYAHGGLWDEVARIRSLMRHRNLSKETGLSWMHVGNTIHEFRAGDTSHPRAQEI 716

Query: 699 RGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRI 758
              L  L  + +  GY+PD S VL D+ +  KE+ L  HSEK+A+AF L    P+ PIRI
Sbjct: 717 YAKLAVLIREIKDIGYVPDTSIVLHDMSDKLKEQCLLQHSEKIAVAFGLITTLPTKPIRI 776

Query: 759 IKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            KNLR+C DCH+AIK ISK   REII+RD +RFH  +DG CSCG++W
Sbjct: 777 FKNLRVCADCHSAIKYISKSTGREIILRDSNRFHRMKDGKCSCGEYW 823



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 121/285 (42%), Gaps = 28/285 (9%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N  +Y++ L++C    D  +   IH +V+K          N L+++Y +   + +A K
Sbjct: 351 EPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARK 410

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
            FD++ ERN +S  + I G T  S         S +      ++ F F + L    ++G 
Sbjct: 411 AFDQLYERNLLSTSSDI-GETGRSN----ASWSSQIESMDVGVSTFTFASLLSAAATVGL 465

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND----------- 221
                 + A   K G +S+  +  +L+  +S CG ++ A + FD + +D           
Sbjct: 466 PTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIIS 525

Query: 222 ------CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT---C 272
                   E AL+ F  M   G KPN+ T+  VL AC  +  ++  K       K     
Sbjct: 526 ALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLI 585

Query: 273 YEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
             M+ Y    ++DL  +SG +  A     EMP K D + W  ++ 
Sbjct: 586 PRMEHY--ACMVDLLARSGLVQEALEFINEMPCKADALVWKTLLG 628


>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 672

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 251/604 (41%), Positives = 359/604 (59%), Gaps = 23/604 (3%)

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           +AL  FS MR +   PN  TF   +K+C  L  +   K  H  A    Y  D++VA AL+
Sbjct: 69  QALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALI 128

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR----------- 333
           D+Y+K G +++AR++F+E+P+++V+ W+ MI+ Y Q + + +AV LF             
Sbjct: 129 DMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDE 188

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           +    V  +      V+ ACA +    +   +H L V+ G    + V N LMD YAKCG 
Sbjct: 189 IVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGE 248

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE-QVPATEVTYSSVLR 452
           +  S ++F    + +  +WN++I  Y Q G   +A  +FS M++  +V    VT S+VL 
Sbjct: 249 ISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLL 308

Query: 453 ACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS 512
           ACA   AL+ G  +H   VK   + ++VV  +++DMY KCG +  AR  FD +   N  S
Sbjct: 309 ACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKS 368

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
           W  M++GY MHG   E +KVF  M + G +PN +TFV VL+ACS+ GLL++G  +F  M 
Sbjct: 369 WTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMK 428

Query: 573 ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIG 632
             + +EP IEHY+ MV LLGRAG+L +A  LI+ +  +P  ++W +LLGAC IH NVE+G
Sbjct: 429 CEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELG 488

Query: 633 RLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGM 681
            +SA+ +   +P +   +VLLSNIYA A  W+               K PG S +E++G 
Sbjct: 489 EISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYSIVEHKGR 548

Query: 682 VHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKL 741
           VH F  GD  H     I   L+ LN+K ++ GY+P++++VL DV  +EK   L VHSEKL
Sbjct: 549 VHVFLVGDKEHPQHEKIYEYLDELNVKLQEVGYMPNVTSVLYDVDVEEKGMVLRVHSEKL 608

Query: 742 ALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSC 801
           A+AF +    P S I+IIKNLRIC DCH AIK+ISKIV REI+IRD  RFHHF+DG CSC
Sbjct: 609 AVAFGIMNSVPGSVIQIIKNLRICGDCHFAIKLISKIVNREIVIRDSKRFHHFKDGLCSC 668

Query: 802 GDFW 805
           GD+W
Sbjct: 669 GDYW 672



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 113/348 (32%), Positives = 190/348 (54%), Gaps = 15/348 (4%)

Query: 294 SNARRIFEE-MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           +N R +F + + K  V  W+ +IA +A++  S+ A+  F  MR+  + PN+ TF   +++
Sbjct: 36  ANLRSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKS 95

Query: 353 CATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTW 412
           C+++  L  G QIH      G  SD+FV++AL+D+Y+KCG + ++ +LF E P+RN V+W
Sbjct: 96  CSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSW 155

Query: 413 NTMIVGYVQLGEVGKAMIMFSK-MLEEQVPATE----------VTYSSVLRACASLAALE 461
            +MI GYVQ     +A+ +F + +L ++    E          V    V+ ACA +    
Sbjct: 156 TSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKS 215

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
               VH L VK  ++  + V N L+D YAKCG I+ +R VFD M + +  SWN++I+ Y+
Sbjct: 216 VTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYA 275

Query: 522 MHGLSAEVLKVFDLMQQRGW-RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPC 580
            +GLS E   +F  M +RG  R N +T   VL AC++ G L+ G+      V    +E  
Sbjct: 276 QNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKC-IHDQVVKMELEDN 334

Query: 581 IEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
           +   TS+V +  + G ++ A K  + +  + +V  W  ++    +H +
Sbjct: 335 LVVGTSIVDMYCKCGRVEMARKAFDRLK-RKNVKSWTVMVAGYGMHGH 381



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 191/407 (46%), Gaps = 37/407 (9%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  ++  +++SC    DL     IH Q    G   D+F  + L+++Y K   L DA KLF
Sbjct: 85  NRSTFPCTIKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLF 144

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFS-------TLHREGHELNPFAFTAFLKVL 167
           DE+PERN +S+ + I GY  + +  EAV LF        T + E   +     +  L  +
Sbjct: 145 DEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCV 204

Query: 168 VSMGWAELC-----PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--- 219
           +S   A +C      CV     K G +    VG  L+DA++ CG +  +RKVFDG+    
Sbjct: 205 IS-ACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETD 263

Query: 220 -------------NDCFEEALNFFSQMRAVG-FKPNNFTFAFVLKACLGLDTIRVAKSAH 265
                        N    EA + FS M   G  + N  T + VL AC     +++ K  H
Sbjct: 264 VCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIH 323

Query: 266 GCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSI 325
              +K   E +L V  +++D+Y K G +  AR+ F+ + +K+V  W+ M+A Y       
Sbjct: 324 DQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGK 383

Query: 326 DAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNAL 384
           +A+++F  M +  + PN  TFVSVL AC+    L  G +  + +     +   +   + +
Sbjct: 384 EAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCM 443

Query: 385 MDVYAKCGRMENSVELFAE-SPKRNHVTWNTM-----IVGYVQLGEV 425
           +D+  + G ++ +  L  E   K + + W ++     I   V+LGE+
Sbjct: 444 VDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEI 490



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 5/125 (4%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
            +N+ + +  L +C  +  LQ    IH QV+K     +L     ++++Y K  R+  A K
Sbjct: 297 RYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARK 356

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV-----L 167
            FD +  +N  S+   + GY +     EA+ +F  + R G + N   F + L       L
Sbjct: 357 AFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGL 416

Query: 168 VSMGW 172
           +  GW
Sbjct: 417 LKEGW 421


>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 776

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 280/810 (34%), Positives = 422/810 (52%), Gaps = 76/810 (9%)

Query: 32  AALSTQQCS-NSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLD 90
            ALS +  S N        + S  N HS  +S Q+ IQ            + L K    D
Sbjct: 7   GALSRRHTSLNGLKRRYNNANSASNFHSSKSSTQTQIQKS--------QTKPLPKSGDSD 58

Query: 91  LFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHR 150
           +   NV ++ Y++  R  +A ++F  MP  +++S+   I GY  + +F  A  LF  +  
Sbjct: 59  IKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMP- 117

Query: 151 EGHELNPFAFTAFLKVLV---SMGWA----ELCPCVFACVYKLGHDSNAFVGTALIDAFS 203
              E +  ++   +K  V   ++G A    E  P    C +             ++  ++
Sbjct: 118 ---ERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSW-----------NTILSGYA 163

Query: 204 VCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAF 247
             GCV+ AR+VFD +                 N   EEA   F      G + N   +A 
Sbjct: 164 QNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLF------GSREN---WAL 214

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEM-DLYVAVALLDLYTKSGEISNARRIFEEMPKK 306
           V   CL    ++  K           ++ D+     ++  Y ++GEI  AR++F+E P  
Sbjct: 215 VSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVH 274

Query: 307 DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIH 366
           DV  W+ M++ Y Q  +  +A ELF RM +     N+ ++ ++L      E +++  ++ 
Sbjct: 275 DVFTWTAMVSGYIQNRMVEEARELFDRMPER----NEVSWNAMLAGYVQGERVEMAKELF 330

Query: 367 SLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVG 426
            ++       +V   N ++  YA+CG++  +  LF + PKR+ V+W  MI GY Q G   
Sbjct: 331 DVMP----CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSY 386

Query: 427 KAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALI 486
           +A+ +F  M  E       ++SS L  CA + ALE G Q+H   VK  Y+    V NAL+
Sbjct: 387 EALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALL 446

Query: 487 DMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNL 546
            MY KCGSI +A  +F  M   + VSWN MI+GYS HG   E L+ F+ M++ G +P++ 
Sbjct: 447 LMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDA 506

Query: 547 TFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEG 606
           T V VLSACS+ GL+++G  YF +M  +YG+ P  +HY  MV LLGRAG L++A  L++ 
Sbjct: 507 TMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKN 566

Query: 607 IPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW--- 663
           +PF+P   IW  LLGA  +H N E+   +A  I   EPE+   +VLLSN+YA +  W   
Sbjct: 567 MPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDV 626

Query: 664 --------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYI 715
                   +K   K PG SWIE Q   H F  GD  H + + I   LE L+++ +KAGY+
Sbjct: 627 GKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKAGYV 686

Query: 716 PDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKII 775
              S VL DV E+EKER +  HSE+LA+A+ + ++    PIR+IKNLR+C DCH AIK +
Sbjct: 687 SKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYM 746

Query: 776 SKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +K+  R II+RD +RFHHF+DG CSCGD+W
Sbjct: 747 AKVTGRLIILRDNNRFHHFKDGSCSCGDYW 776



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 135/551 (24%), Positives = 248/551 (45%), Gaps = 65/551 (11%)

Query: 19  SKINAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTI 78
           S I  W   ++  + + T +CS +    +   +  ++S SY   +   ++N + + A  +
Sbjct: 57  SDIKEW--NVAISSYMRTGRCSEALR--VFKRMPRWSSVSYNAMISGYLRNGEFELARML 112

Query: 79  HCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQF 138
             ++ ++    DL + NV++  YV+   L  A +LF+ MPER+  S+ T + GY  +   
Sbjct: 113 FDEMPER----DLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGCV 168

Query: 139 VEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDS-NAFVG-- 195
            +A  +F  +     E N  ++ A L   V     E    +F         S N  +G  
Sbjct: 169 DDARRVFDRM----PEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGF 224

Query: 196 ------------------------TALIDAFSVCGCVEFARKVFDG-------------- 217
                                     +I  ++  G ++ AR++FD               
Sbjct: 225 VKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVS 284

Query: 218 --LFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
             + N   EEA   F +M     + N  ++  +L   +  + + +AK      +  C  +
Sbjct: 285 GYIQNRMVEEARELFDRMP----ERNEVSWNAMLAGYVQGERVEMAKELFD--VMPCRNV 338

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
             +    ++  Y + G+IS A+ +F++MPK+D + W+ MIA Y+Q+  S +A+ LF  M 
Sbjct: 339 STW--NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLME 396

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
           +     N+ +F S L  CA +  L+LG Q+H  +V+ G  +  FV NAL+ +Y KCG +E
Sbjct: 397 REGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIE 456

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
            + +LF E   ++ V+WNTMI GY + G   +A+  F  M  E +   + T  +VL AC+
Sbjct: 457 EANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACS 516

Query: 456 SLAALEPGMQ-VHCLTVKANYDMDVVVANALIDMYAKCGSITDAR-LVFDMMNDWNEVSW 513
               ++ G Q  H +T       +      ++D+  + G + +A  L+ +M  + +   W
Sbjct: 517 HTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIW 576

Query: 514 NAMISGYSMHG 524
             ++    +HG
Sbjct: 577 GTLLGASRVHG 587


>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 793

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 255/740 (34%), Positives = 409/740 (55%), Gaps = 35/740 (4%)

Query: 101 YVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAF 160
           Y K   + +A KLFD M ER+ IS+   I GY     + +A+GLFS       +L+ F++
Sbjct: 54  YSKWGEMGNAQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSY 113

Query: 161 TAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF---DG 217
              L     +    L   +       G     F+   LID +  C  ++ AR +F   D 
Sbjct: 114 AGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDE 173

Query: 218 LFN-------------DCFEEALNFFSQMRAVGFKPNNFTFAFVLKAC-LGLDT-IRVAK 262
           L N               +EE L    +M   G + N FT    LK+C L L+  +   K
Sbjct: 174 LDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGK 233

Query: 263 SAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTD 322
           + HG  +K   ++D+ V  ALLD+Y K+G + +A ++F   P ++V+ ++ MIA + QT+
Sbjct: 234 TLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTE 293

Query: 323 -----LSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD 377
                 + +A++LF +M++  + P+ FTF S+++ C  +E  + G QIH+ + +  + SD
Sbjct: 294 DIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSD 353

Query: 378 VFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
            F+ + L+++Y+  G  E+ ++ F  +PK + V+W TMI GY Q G+   A+ +F ++L 
Sbjct: 354 EFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLA 413

Query: 438 EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITD 497
                 E   +++L ACA +AA   G QVH   VK       +V N+ I MYAK G++  
Sbjct: 414 SGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDS 473

Query: 498 ARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSN 557
           A++ F+ + + + VSW+ MI   + HG + + + +F+LM+  G  PN +TF+GVL+ACS+
Sbjct: 474 AKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSH 533

Query: 558 GGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWR 617
           GGL+E+G  Y++SM  +Y ++  ++H T +V LL RAG L  A   I    F    ++WR
Sbjct: 534 GGLVEEGLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPVMWR 593

Query: 618 ALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMAR-----------SWEKA 666
            LL  C I+ ++  G+  A+ +++ +P++ +++VLL NIY  A              ++ 
Sbjct: 594 TLLSGCRIYKDIVTGKHVAEKLIELDPQESSSYVLLYNIYTDAGIDLPATKIRELMKDRG 653

Query: 667 ASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPD-LSAVLRDV 725
             KEPG SWIE    VH F  GD SH    II   LE +  K RK GYI   +  V    
Sbjct: 654 IRKEPGQSWIEVGNEVHSFVVGDISHPMSQIIYKKLEGMLEKKRKIGYIDQKIQNVTIST 713

Query: 726 REDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIII 785
           +E +    +  HSEKLA++F +  +PPS+P++++KNLR+C DCH  +K+IS + +REII+
Sbjct: 714 KEVKGTLGVNHHSEKLAVSFGIVSLPPSAPVKVMKNLRVCHDCHATMKLISVVEKREIIL 773

Query: 786 RDVHRFHHFQDGCCSCGDFW 805
           RD  RFHHF++G CSC D+W
Sbjct: 774 RDSLRFHHFKEGSCSCNDYW 793


>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 937

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 268/780 (34%), Positives = 410/780 (52%), Gaps = 30/780 (3%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N +S +  + SC    D      I  QV+K G    L   N L+++   +  +  A  +F
Sbjct: 159 NENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIF 218

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D+M ER+TIS+ +    Y  +    E+  +FS + R   E+N    +  L VL  +   +
Sbjct: 219 DQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQK 278

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------F 219
               +   V K+G DS   V   L+  ++  G    A  VF  +                
Sbjct: 279 WGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFV 338

Query: 220 NDCFE-EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
           ND    +AL     M + G   N  TF   L AC   D     +  HG  + +    +  
Sbjct: 339 NDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQI 398

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           +  AL+ +Y K GE+S +RR+  +MP++DV+ W+ +I  YA+ +    A+  F  MR   
Sbjct: 399 IGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEG 458

Query: 339 VAPNQFTFVSVLQACATMEG--LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
           V+ N  T VSVL AC  + G  L+ G  +H+ +V  G  SD  V N+L+ +YAKCG + +
Sbjct: 459 VSSNYITVVSVLSAC-LLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSS 517

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           S +LF     RN +TWN M+      G   + + + SKM    V   + ++S  L A A 
Sbjct: 518 SQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAK 577

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           LA LE G Q+H L VK  ++ D  + NA  DMY+KCG I +   +     + +  SWN +
Sbjct: 578 LAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNIL 637

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           IS    HG   EV   F  M + G +P ++TFV +L+ACS+GGL+++G AY+  +  ++G
Sbjct: 638 ISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFG 697

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
           +EP IEH   ++ LLGR+G L +A   I  +P +P+ ++WR+LL +C IH N++ GR +A
Sbjct: 698 LEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAA 757

Query: 637 QHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYF 685
           +++   EPED++ +VL SN++A    WE           K   K+   SW++ +  V  F
Sbjct: 758 ENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSF 817

Query: 686 RAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAF 745
             GD +H     I   LE +    +++GY+ D S  L+D  E++KE  LW HSE+LALA+
Sbjct: 818 GIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAY 877

Query: 746 ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           AL   P  S +RI KNLRIC DCH+  K +S+++ R I++RD +RFHHF+ G CSC D+W
Sbjct: 878 ALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937



 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 159/576 (27%), Positives = 274/576 (47%), Gaps = 19/576 (3%)

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
            +  + +H  V K G   D++ +  +L++Y     +  + K+F+EMP+RN +S+ + + G
Sbjct: 75  FREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVG 134

Query: 132 YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSN 191
           Y+   +  E + ++  +  EG   N  + +  +     +    L   +   V K G +S 
Sbjct: 135 YSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESK 194

Query: 192 AFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRA 235
             V  +LI      G V++A  +FD +                 N   EE+   FS MR 
Sbjct: 195 LAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR 254

Query: 236 VGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISN 295
              + N+ T + +L     +D  +  +  HG  +K  ++  + V   LL +Y  +G    
Sbjct: 255 FHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVE 314

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACAT 355
           A  +F++MP KD+I W+ ++A +     S+DA+ L C M  +  + N  TF S L AC T
Sbjct: 315 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFT 374

Query: 356 MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTM 415
            +  + G  +H LVV  GL  +  + NAL+ +Y K G M  S  +  + P+R+ V WN +
Sbjct: 375 PDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNAL 434

Query: 416 IVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA-LEPGMQVHCLTVKAN 474
           I GY +  +  KA+  F  M  E V +  +T  SVL AC      LE G  +H   V A 
Sbjct: 435 IGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAG 494

Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
           ++ D  V N+LI MYAKCG ++ ++ +F+ +++ N ++WNAM++  + HG   EVLK+  
Sbjct: 495 FESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVS 554

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
            M+  G   +  +F   LSA +   +LE+G+     +    G E     + +   +  + 
Sbjct: 555 KMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQ-LHGLAVKLGFEHDSFIFNAAADMYSKC 613

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
           G + +  K++       S+  W  L+ A   H   E
Sbjct: 614 GEIGEVVKMLPP-SVNRSLPSWNILISALGRHGYFE 648



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 151/550 (27%), Positives = 259/550 (47%), Gaps = 22/550 (4%)

Query: 100 VYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFA 159
           +Y K  R+  A  LFD MP RN +S+ T + G      ++E +  F  +   G + + F 
Sbjct: 1   MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60

Query: 160 FTAFLKVLVSMG--WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG 217
             + +      G  + E    V   V K G  S+ +V TA++  + V G V  +RKVF+ 
Sbjct: 61  IASLVTACGRSGSMFREGVQ-VHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119

Query: 218 L--------------FNDCFE--EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVA 261
           +              ++D  E  E ++ +  MR  G   N  + + V+ +C  L    + 
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 179

Query: 262 KSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQT 321
           +   G  +K+  E  L V  +L+ +    G +  A  IF++M ++D I W+ + A YAQ 
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239

Query: 322 DLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVS 381
               ++  +F  MR+     N  T  ++L     ++    G  IH LVV++G  S V V 
Sbjct: 240 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 299

Query: 382 NALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVP 441
           N L+ +YA  GR   +  +F + P ++ ++WN+++  +V  G    A+ +   M+     
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 359

Query: 442 ATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLV 501
              VT++S L AC +    E G  +H L V +    + ++ NAL+ MY K G ++++R V
Sbjct: 360 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 419

Query: 502 FDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSAC-SNGGL 560
              M   + V+WNA+I GY+      + L  F  M+  G   N +T V VLSAC   G L
Sbjct: 420 LLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL 479

Query: 561 LEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
           LE+G+    + + + G E       S++++  + G L  +  L  G+    +++ W A+L
Sbjct: 480 LERGKP-LHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAML 537

Query: 621 GACIIHNNVE 630
            A   H + E
Sbjct: 538 AANAHHGHGE 547



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 125/492 (25%), Positives = 232/492 (47%), Gaps = 21/492 (4%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E NS + +T L      D  +    IH  V+K G    +   N LL +Y    R  +A  
Sbjct: 258 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 317

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +F +MP ++ IS+ + +  +    + ++A+GL  ++   G  +N   FT+ L    +  +
Sbjct: 318 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 377

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKV-----------FDGLFND 221
            E    +   V   G   N  +G AL+  +   G +  +R+V           ++ L   
Sbjct: 378 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 437

Query: 222 CFEE-----ALNFFSQMRAVGFKPNNFTFAFVLKAC-LGLDTIRVAKSAHGCALKTCYEM 275
             E+     AL  F  MR  G   N  T   VL AC L  D +   K  H   +   +E 
Sbjct: 438 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 497

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
           D +V  +L+ +Y K G++S+++ +F  +  +++I W+ M+A  A      + ++L  +MR
Sbjct: 498 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR 557

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
              V+ +QF+F   L A A +  L+ G Q+H L V++G   D F+ NA  D+Y+KCG + 
Sbjct: 558 SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIG 617

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
             V++   S  R+  +WN +I    + G   +    F +MLE  +    VT+ S+L AC+
Sbjct: 618 EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACS 677

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANAL--IDMYAKCGSITDAR-LVFDMMNDWNEVS 512
               ++ G+  + +  + ++ ++  + + +  ID+  + G + +A   +  M    N++ 
Sbjct: 678 HGGLVDKGLAYYDMIAR-DFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLV 736

Query: 513 WNAMISGYSMHG 524
           W ++++   +HG
Sbjct: 737 WRSLLASCKIHG 748


>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
 gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
          Length = 782

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 259/771 (33%), Positives = 403/771 (52%), Gaps = 28/771 (3%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           LQ C    ++     +H  V  +G   +      L+ +Y +   +P+A ++F+ +  ++ 
Sbjct: 12  LQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKDV 71

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
            ++   I  Y     +  A+G+F  +  E        + A L    S    +    +   
Sbjct: 72  FAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQ 131

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN----------------DCFEEA 226
           + + G + + FVGTALI+ ++ CG V  A   F  L +                D F  A
Sbjct: 132 ILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALA 191

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
              + +M+  G  PN  T   V  A      +   K  +        E D+ V  + +++
Sbjct: 192 RWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNM 251

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           +  +G + +ARR+FE+M  +DV+ W+ +I  Y Q +   +AV LF R++Q  +  N  TF
Sbjct: 252 FGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITF 311

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
           V +L    ++  L  G  IH LV   G   DV V+ ALM +Y +C     + ++F +   
Sbjct: 312 VLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGS 371

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
           ++ +TW  M V Y Q G   +A+ +F +M  E    T  T  +VL  CA LAAL+ G Q+
Sbjct: 372 KDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQI 431

Query: 467 HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLS 526
           H   ++  + M++VV  ALI+MY KCG + +AR VF+ M   + + WN+M+  Y+ HG  
Sbjct: 432 HSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYY 491

Query: 527 AEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTS 586
            E L++F+ MQ  G + + ++FV VLSA S+ G +  G  YF +M+ ++ I P  E Y  
Sbjct: 492 DETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGC 551

Query: 587 MVSLLGRAGHLDKAAKLIEGIPF-QPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPE 645
           +V LLGRAG + +A  ++  +    P  ++W  LLGAC  HN  +  + +A+ +L+ +P 
Sbjct: 552 VVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPS 611

Query: 646 DEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHAD 694
               +V+LSN+YA A  W+           +   KEPG S IE    VH F  GD SH  
Sbjct: 612 HSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPR 671

Query: 695 MNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSS 754
            + I   L+ LN + R AGYIPD   +L DV ++ KE  L+ HSE+LA+AF L   PP +
Sbjct: 672 RHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGLMSTPPGT 731

Query: 755 PIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           P+R+IKNLR+C DCHTA K ISK+  REI++RD HRFH+F+DG CSC D+W
Sbjct: 732 PLRVIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNFKDGRCSCKDYW 782



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/461 (26%), Positives = 209/461 (45%), Gaps = 23/461 (4%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +Y   L +C   + L+  M IH Q+L++G   D+F    L+N+Y K   +  A   F  +
Sbjct: 108 TYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRL 167

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
             R+ +S+   I       QF  A  L+  +  +G   N               +     
Sbjct: 168 EHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGK 227

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------ND 221
            +++ V     +S+  V  + ++ F   G +  AR++F+ +                 N+
Sbjct: 228 FIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNE 287

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
            F EA+  F +++  G K N+ TF  +L     L ++   K  H    +  Y+ D+ VA 
Sbjct: 288 NFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVAT 347

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           AL+ LY +      A +IF +M  KDVI W+ M   YAQ     +A++LF  M+     P
Sbjct: 348 ALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRP 407

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
              T V+VL  CA +  L  G QIHS ++  G   ++ V  AL+++Y KCG+M  +  +F
Sbjct: 408 TSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVF 467

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
            +  KR+ + WN+M+  Y Q G   + + +F++M  +   A  V++ SVL A +   ++ 
Sbjct: 468 EKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVT 527

Query: 462 PGMQVHCLTVKANYDMDVVVANAL----IDMYAKCGSITDA 498
            G Q     ++   D  +     L    +D+  + G I +A
Sbjct: 528 DGYQYFVAMLQ---DFSITPTPELYGCVVDLLGRAGRIQEA 565



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 184/356 (51%), Gaps = 1/356 (0%)

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR 297
           FKP+   F  +L+ C     +   +  H       +E +  V   L+ +Y + G +  A+
Sbjct: 1   FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQ 60

Query: 298 RIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATME 357
           ++FE + +KDV  W+ MI  Y Q      A+ +F +M++  V P + T+V++L ACA+ E
Sbjct: 61  QVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTE 120

Query: 358 GLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIV 417
            L  G +IH  +++ G   DVFV  AL+++Y KCG +  + + F     R+ V+W  MI 
Sbjct: 121 SLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIA 180

Query: 418 GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM 477
             VQ  +   A  ++ +M  + V   ++T  +V  A      L  G  ++ L      + 
Sbjct: 181 ACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMES 240

Query: 478 DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQ 537
           DV V N+ ++M+   G + DAR +F+ M D + V+WN +I+ Y  +    E +++F  +Q
Sbjct: 241 DVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQ 300

Query: 538 QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGR 593
           Q G + N++TFV +L+  ++   L +G+     +V   G +  +   T+++SL GR
Sbjct: 301 QDGIKANDITFVLMLNVYTSLTSLAKGKV-IHELVKEAGYDRDVVVATALMSLYGR 355


>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 792

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 270/758 (35%), Positives = 404/758 (53%), Gaps = 36/758 (4%)

Query: 79  HCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQF 138
           H Q++  G   D+     L      L  +  A  +F  +   +   F   ++G++V+   
Sbjct: 40  HAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESP 99

Query: 139 VEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE-LCPCVFACVYKL-GHDSNAFVGT 196
             ++ +F+ L R+  +L P + T    +  + G+ +    CV      + G DS   +G+
Sbjct: 100 HSSLAVFAHL-RKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLGS 158

Query: 197 ALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQM-RAVGFK 239
            ++  +     VE ARKVFD +                 N+ + E++  F  +      +
Sbjct: 159 NIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTR 218

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKT-CYEMDLYVAVALLDLYTKSGEISNARR 298
            +  T   +L A   L  +R+    H  A KT CY  D YV    + LY+K G+I  A  
Sbjct: 219 LDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHD-YVLTGFISLYSKCGKIKMAST 277

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           +F E  + D++ ++ MI  Y     +  ++ LF  +  +       T VS++        
Sbjct: 278 LFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGH--- 334

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           L L   IH   ++   LS   VS AL  VY+K   +E++ +LF ESP+++  +WN MI G
Sbjct: 335 LMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISG 394

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           Y Q G    A+ +F +M   +     VT + +L ACA L AL  G  VH L    +++  
Sbjct: 395 YTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESS 454

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
           + V+ ALI MYAKCGSI +AR +FD M   NEV+WN MISGY +HG   E L +F  M  
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLN 514

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLD 598
            G  P  +TF+ VL ACS+ GL+++G+  F SM+  YG EP ++HY  +V +LGRAGHL 
Sbjct: 515 SGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQ 574

Query: 599 KAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYA 658
           +A + IE +P QP   +W  LLGAC IH +  + R  ++ + + +P++   HVLLSNI++
Sbjct: 575 RALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHS 634

Query: 659 MARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNM 707
             R++ +AA+           K PG + IE     H F +GD SH  +  I   LE L  
Sbjct: 635 ADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKAIHEKLEKLEG 694

Query: 708 KSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVD 767
           K R+AGY P+    L DV E+E+E  + VHSE+LA+AF L    P + IRIIKNLR+C+D
Sbjct: 695 KMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLD 754

Query: 768 CHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           CHTA K+ISKI +R I++RD +RFHHF+DG CSCGD+W
Sbjct: 755 CHTATKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792


>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Glycine max]
          Length = 686

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 251/601 (41%), Positives = 352/601 (58%), Gaps = 16/601 (2%)

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           N  F  AL  FS MR     PN+FTF  V KA   L      K  H  ALK    +D++V
Sbjct: 87  NRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGNILDVFV 146

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
             +  D+Y+K+G    AR +F+EMP +++  W+  ++   Q    +DA+  F +      
Sbjct: 147 GCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDG 206

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
            PN  TF + L ACA +  L+LG Q+H  +VR     DV V N L+D Y KCG + +S  
Sbjct: 207 EPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSEL 266

Query: 400 LFAE--SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
           +F+   S +RN V+W +++   VQ  E  +A ++F +  +E  P T+   SSVL ACA L
Sbjct: 267 VFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQARKEVEP-TDFMISSVLSACAEL 325

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
             LE G  VH L +KA  + ++ V +AL+D+Y KCGSI  A  VF  M + N V+WNAMI
Sbjct: 326 GGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMI 385

Query: 518 SGYSMHGLSAEVLKVFDLMQQR--GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
            GY+  G     L +F  M     G   + +T V VLSACS  G +E+G   F+SM   Y
Sbjct: 386 GGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGRY 445

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS 635
           GIEP  EHY  +V LLGR+G +D+A + I+ +P  P++ +W ALLGAC +H   ++G+++
Sbjct: 446 GIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACKMHGKTKLGKIA 505

Query: 636 AQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHY 684
           A+ + + +P+D   HV+ SN+ A A  WE+A             K  G SW+  +  VH 
Sbjct: 506 AEKLFELDPDDSGNHVVFSNMLASAGRWEEATIVRKEMRDIGIKKNVGYSWVAVKNRVHV 565

Query: 685 FRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALA 744
           F+A D+ H   + I+ ML  L  + +KAGY+PD +  L D+ E+EK   +W HSEK+ALA
Sbjct: 566 FQAKDSFHEKNSEIQAMLAKLRGEMKKAGYVPDANLSLFDLEEEEKASEVWYHSEKIALA 625

Query: 745 FALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
           F L  +P   PIRI KNLRIC+DCH+AIK ISKIV REII+RD +RFH F+DG CSC D+
Sbjct: 626 FGLITLPRGVPIRITKNLRICIDCHSAIKFISKIVGREIIVRDNNRFHRFKDGWCSCKDY 685

Query: 805 W 805
           W
Sbjct: 686 W 686



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 137/487 (28%), Positives = 237/487 (48%), Gaps = 28/487 (5%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNC-LDLFATNVLLNVYVKLNRLPDATKLFDEMPE-R 120
           L+S + +        +H  +L+  +  L  F  N L+N+Y KL+ LP++ +L   +   R
Sbjct: 14  LESAVLSRSSLLGRAVHAHILRTHDTPLPSFLCNHLVNMYSKLD-LPNSAQLVLSLTNPR 72

Query: 121 NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVF 180
             +++ + I G   + +F  A+  FS + RE    N F F    K   S+        + 
Sbjct: 73  TVVTWTSLISGCVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQLH 132

Query: 181 ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFE---------------- 224
           A   K G+  + FVG +  D +S  G    AR +FD + +                    
Sbjct: 133 ALALKGGNILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCL 192

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           +A+  F +   V  +PN  TF   L AC  + ++ + +  HG  +++ Y  D+ V   L+
Sbjct: 193 DAIAAFKKFLCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLI 252

Query: 285 DLYTKSGEISNARRIFEEM--PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           D Y K G+I ++  +F  +   +++V+ W  ++A   Q      A  +F + R+  V P 
Sbjct: 253 DFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQARKE-VEPT 311

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
            F   SVL ACA + GL+LG  +H+L ++  +  ++FV +AL+D+Y KCG +E + ++F 
Sbjct: 312 DFMISSVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFR 371

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ--VPATEVTYSSVLRACASLAAL 460
           E P+RN VTWN MI GY  LG+V  A+ +F +M      +  + VT  SVL AC+   A+
Sbjct: 372 EMPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAV 431

Query: 461 EPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDARLVFDMMNDWNEVS-WNAMI 517
           E G+Q+   +++  Y ++    +   ++D+  + G +  A      M     +S W A++
Sbjct: 432 ERGLQIF-ESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALL 490

Query: 518 SGYSMHG 524
               MHG
Sbjct: 491 GACKMHG 497



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 194/392 (49%), Gaps = 17/392 (4%)

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL--YVAVALLDLYTKSGEISNA 296
           +P N   +F+  A L   ++ + ++ H   L+T ++  L  ++   L+++Y+K    ++A
Sbjct: 5   RPPNLLGSFLESAVLSRSSL-LGRAVHAHILRT-HDTPLPSFLCNHLVNMYSKLDLPNSA 62

Query: 297 RRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM 356
           + +      + V+ W+ +I+          A+  F  MR+  V PN FTF  V +A A++
Sbjct: 63  QLVLSLTNPRTVVTWTSLISGCVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASL 122

Query: 357 EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMI 416
                G Q+H+L ++ G + DVFV  +  D+Y+K G    +  +F E P RN  TWN  +
Sbjct: 123 HMPVTGKQLHALALKGGNILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYM 182

Query: 417 VGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD 476
              VQ G    A+  F K L        +T+ + L ACA + +LE G Q+H   V++ Y 
Sbjct: 183 SNAVQDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYR 242

Query: 477 MDVVVANALIDMYAKCGSITDARLVFDMMNDW--NEVSWNAMISGYSMHGLSAEVLKVFD 534
            DV V N LID Y KCG I  + LVF  +     N VSW ++++    +        VF 
Sbjct: 243 EDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVF- 301

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY----TSMVSL 590
           L  ++   P +     VLSAC+  G LE G +     V    ++ C+E      +++V L
Sbjct: 302 LQARKEVEPTDFMISSVLSACAELGGLELGRS-----VHALALKACVEENIFVGSALVDL 356

Query: 591 LGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
            G+ G ++ A ++   +P + +++ W A++G 
Sbjct: 357 YGKCGSIEYAEQVFREMP-ERNLVTWNAMIGG 387



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 166/386 (43%), Gaps = 23/386 (5%)

Query: 74  TAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYT 133
           T   +H   LK GN LD+F      ++Y K    P+A  +FDEMP RN  ++   +    
Sbjct: 127 TGKQLHALALKGGNILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAV 186

Query: 134 VSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAF 193
              + ++A+  F        E N   F AFL     +   EL   +   + +  +  +  
Sbjct: 187 QDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVS 246

Query: 194 VGTALIDAFSVCGCVEFARKVFDGLF------------------NDCFEEALNFFSQMRA 235
           V   LID +  CG +  +  VF  +                   N   E A   F Q R 
Sbjct: 247 VFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQARK 306

Query: 236 VGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISN 295
              +P +F  + VL AC  L  + + +S H  ALK C E +++V  AL+DLY K G I  
Sbjct: 307 -EVEPTDFMISSVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEY 365

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF--VAPNQFTFVSVLQAC 353
           A ++F EMP+++++ W+ MI  YA       A+ LF  M      +A +  T VSVL AC
Sbjct: 366 AEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSAC 425

Query: 354 ATMEGLDLGNQI-HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT- 411
           +    ++ G QI  S+  R G+         ++D+  + G ++ + E     P    ++ 
Sbjct: 426 SRAGAVERGLQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISV 485

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLE 437
           W  ++      G+     I   K+ E
Sbjct: 486 WGALLGACKMHGKTKLGKIAAEKLFE 511


>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 255/628 (40%), Positives = 370/628 (58%), Gaps = 44/628 (7%)

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE----- 274
           ND F EA++ + +M   G +P+NF F  VLKA  GL  ++  +  H  A+K  Y      
Sbjct: 71  ND-FREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVT 129

Query: 275 -----MDLY-----------VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARY 318
                +++Y              AL+ +Y K G + +++ +FE    +D++ W+ MI+ +
Sbjct: 130 VANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSF 189

Query: 319 AQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG-LLSD 377
           +Q+D   +A+  F  M    V  +  T  SVL AC+ +E LD+G +IH+ V+R   L+ +
Sbjct: 190 SQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIEN 249

Query: 378 VFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
            FV +AL+D+Y  C ++E+   +F     R    WN MI GY + G   KA+I+F +M++
Sbjct: 250 SFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIK 309

Query: 438 EQ--VPATEVTYSSVLRACA-SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGS 494
               +P T  T +SV+ AC  SLAA+  G ++H   ++     D+ V +AL+DMYAKCG 
Sbjct: 310 VAGLLPNT-TTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGC 368

Query: 495 ITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR-----PNNLTFV 549
           +  +R VF+ M + N ++WN +I    MHG   E L++F  M     R     PN +TF+
Sbjct: 369 LNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFI 428

Query: 550 GVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF 609
            V +ACS+ GL+ +G   F  M  ++G+EP  +HY  +V LLGRAG L++A +L+  +P 
Sbjct: 429 TVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPA 488

Query: 610 Q-PSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKA-- 666
           +   V  W +LLGAC IH NVE+G ++A+++L  EP   + +VLLSNIY+ A  W KA  
Sbjct: 489 EFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAME 548

Query: 667 ---------ASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPD 717
                      KEPG SWIE +  VH F AGD SH     + G LE L+ K RK GY+PD
Sbjct: 549 VRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPD 608

Query: 718 LSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISK 777
            S VL +V EDEKE  L  HSEKLA+AF +   PP + IR+ KNLR+C DCH A K ISK
Sbjct: 609 TSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHAATKFISK 668

Query: 778 IVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           I++REII+RDV RFHHF++G CSCGD+W
Sbjct: 669 IMEREIIVRDVRRFHHFKEGTCSCGDYW 696



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 218/457 (47%), Gaps = 54/457 (11%)

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
           P R+T S+V  ++  T S+ F EA+  +  +   G   + FAF A LK +  +   +   
Sbjct: 53  PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112

Query: 178 CVFACVYKLGHDSNA---------------------FVGTALIDAFSVCGCVEFARKVFD 216
            + A   K G+ S++                     F   AL+  ++  G V+ ++ +F+
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFE 172

Query: 217 GLFN----------------DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRV 260
              +                D F EAL FF  M   G + +  T A VL AC  L+ + V
Sbjct: 173 SFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDV 232

Query: 261 AKSAHGCALKTCYEMD-LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYA 319
            K  H   L+    ++  +V  AL+D+Y    ++ + RR+F+ +  + +  W+ MI+ YA
Sbjct: 233 GKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYA 292

Query: 320 QTDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQACA-TMEGLDLGNQIHSLVVRVGLLSD 377
           +  L   A+ LF  M + A + PN  T  SV+ AC  ++  +  G +IH+  +R  L SD
Sbjct: 293 RNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASD 352

Query: 378 VFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
           + V +AL+D+YAKCG +  S  +F E P +N +TWN +I+     G+  +A+ +F  M+ 
Sbjct: 353 ITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVA 412

Query: 438 E-----QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN----ALIDM 488
           E     +    EVT+ +V  AC+    +  G+    L  +  +D  V   +     ++D+
Sbjct: 413 EAGRGGEAKPNEVTFITVFAACSHSGLISEGLN---LFYRMKHDHGVEPTSDHYACVVDL 469

Query: 489 YAKCGSITDA-RLVFDMMNDWNEV-SWNAMISGYSMH 523
             + G + +A  LV  M  ++++V +W++++    +H
Sbjct: 470 LGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIH 506



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 134/486 (27%), Positives = 224/486 (46%), Gaps = 66/486 (13%)

Query: 23  AWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQV 82
           +W+  L ++   +  + + ST   +T S +  ++ ++   L++     DL+T   IH   
Sbjct: 59  SWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAA 118

Query: 83  LK-----------------KGNCLDL----FATNVLLNVYVKLNRLPDATKLFDEMPERN 121
           +K                  G C  +    F  N L+ +Y KL R+ D+  LF+   +R+
Sbjct: 119 VKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESFVDRD 178

Query: 122 TISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFA 181
            +S+ T I  ++ S +F EA+  F  +  EG EL+     + L     +   ++   + A
Sbjct: 179 MVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHA 238

Query: 182 CVYKLGHD--SNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCF 223
            V +  +D   N+FVG+AL+D +  C  VE  R+VFD +                 N   
Sbjct: 239 YVLR-NNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLD 297

Query: 224 EEALNFFSQM-RAVGFKPNNFTFAFVLKACL-GLDTIRVAKSAHGCALKTCYEMDLYVAV 281
           E+AL  F +M +  G  PN  T A V+ AC+  L  I   K  H  A++     D+ V  
Sbjct: 298 EKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGS 357

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM-----RQ 336
           AL+D+Y K G ++ +RR+F EMP K+VI W+ +I          +A+ELF  M     R 
Sbjct: 358 ALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRG 417

Query: 337 AFVAPNQFTFVSVLQACA----TMEGLDLGNQI-HSLVVRVGLLSDVFVSNALMDVYAKC 391
               PN+ TF++V  AC+      EGL+L  ++ H   V     SD +    ++D+  + 
Sbjct: 418 GEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEP--TSDHYA--CVVDLLGRA 473

Query: 392 GRMENSVELFAESPKR-NHV-TWNTM-----IVGYVQLGEVGKAMIMFSKMLEEQVPATE 444
           G++E + EL    P   + V  W+++     I   V+LGEV    ++    LE  V +  
Sbjct: 474 GQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLH---LEPNVASHY 530

Query: 445 VTYSSV 450
           V  S++
Sbjct: 531 VLLSNI 536



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 171/352 (48%), Gaps = 28/352 (7%)

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
           P +    W   +    +++   +A+  +  M  +   P+ F F +VL+A + ++ L  G 
Sbjct: 53  PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112

Query: 364 QIHSLVVRVGLLSD---------------------VFVSNALMDVYAKCGRMENSVELFA 402
           QIH+  V+ G  S                       F +NALM +YAK GR+++S  LF 
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFE 172

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
               R+ V+WNTMI  + Q     +A+  F  M+ E V    VT +SVL AC+ L  L+ 
Sbjct: 173 SFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDV 232

Query: 463 GMQVHCLTVKANYDM--DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY 520
           G ++H   ++ N D+  +  V +AL+DMY  C  +   R VFD +       WNAMISGY
Sbjct: 233 GKEIHAYVLR-NNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGY 291

Query: 521 SMHGLSAEVLKVF-DLMQQRGWRPNNLTFVGVLSACSNG-GLLEQGEAYFKSMVANYGIE 578
           + +GL  + L +F ++++  G  PN  T   V+ AC +    + +G+      + N  + 
Sbjct: 292 ARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNM-LA 350

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
             I   +++V +  + G L+ + ++   +P   +V+ W  L+ AC +H   E
Sbjct: 351 SDITVGSALVDMYAKCGCLNLSRRVFNEMP-NKNVITWNVLIMACGMHGKGE 401



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 82/183 (44%), Gaps = 21/183 (11%)

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
           SP R+  +W   +    +  +  +A+  + +M           + +VL+A + L  L+ G
Sbjct: 52  SPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTG 111

Query: 464 MQVHCLTVKANY-DMDVVVANALIDMYAKCGSI--------------------TDARLVF 502
            Q+H   VK  Y    V VAN L++MY KCG I                     D++ +F
Sbjct: 112 EQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALF 171

Query: 503 DMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLE 562
           +   D + VSWN MIS +S     +E L  F LM   G   + +T   VL ACS+   L+
Sbjct: 172 ESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLD 231

Query: 563 QGE 565
            G+
Sbjct: 232 VGK 234


>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Vitis vinifera]
          Length = 993

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 261/772 (33%), Positives = 425/772 (55%), Gaps = 30/772 (3%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPER-N 121
           L++C    D +    +H   +K+G    +F  N ++ +Y K N L  A +LFD MPE+ +
Sbjct: 223 LKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKED 282

Query: 122 TISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFA 181
            +S+ + I  Y+ + Q +EA+ LF  + +     N + F A L+      + +    + A
Sbjct: 283 VVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHA 342

Query: 182 CVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEE 225
            V K  +  N FV  ALI  ++  G +  A  +F  +                 N  + E
Sbjct: 343 TVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHE 402

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           AL F+ +MR  G KP+      ++ A             H  A+K   + DL V  +L+D
Sbjct: 403 ALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVD 462

Query: 286 LYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFT 345
           +Y K   +     IF++MP KDV+ W+ +IA +AQ      A+ELF  ++   +  +   
Sbjct: 463 MYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMM 522

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
             S+L AC+ ++ +    +IHS ++R GL SD+ + N ++DVY +CG ++ +  +F    
Sbjct: 523 ISSILLACSGLKLISSVKEIHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIE 581

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
            ++ V+W +MI  YV  G   +A+ +F  M E  V    ++  S+L A ASL+AL+ G +
Sbjct: 582 FKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKE 641

Query: 466 VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGL 525
           +H   ++  + ++  +A+ L+DMYA+CG++  +R VF+ + + + V W +MI+ Y MHG 
Sbjct: 642 IHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGC 701

Query: 526 SAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYT 585
               + +F  M+     P+++ FV VL ACS+ GL+ +G  + +SM   Y +EP  EHY 
Sbjct: 702 GRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYV 761

Query: 586 SMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPE 645
            +V LLGRA HL++A + ++G+  +P+  +W ALLGAC IH+N E+G ++AQ +L+ +PE
Sbjct: 762 CLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPE 821

Query: 646 DEATHVLLSNIYAMARSWE---------KAAS--KEPGLSWIENQGMVHYFRAGDTSHAD 694
           +   +VL+SN+YA  R W+         KA+   K PG SWIE    VH F A D SH  
Sbjct: 822 NPGNYVLVSNVYAAERRWKDVEEVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQ 881

Query: 695 MNIIRGMLEWLNMK-SRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPS 753
              I   L  +  K +++ GY+     VL + +E+EK + L+ HSE+LA+A+ +   P  
Sbjct: 882 SYEIYSKLSQITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEG 941

Query: 754 SPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           + +RI KNLR+C DCH   K+ISK  +RE+++RD +RFHHF+ G CSCGD W
Sbjct: 942 ASLRITKNLRVCGDCHNFCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 993



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 159/604 (26%), Positives = 301/604 (49%), Gaps = 27/604 (4%)

Query: 42  STTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLD-LFATNVLLNV 100
           +  +P  FS+ E    +Y++ L+ C     L     +H  ++      + +F +  L+ +
Sbjct: 104 ANQSPSQFSLDE----AYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFM 159

Query: 101 YVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAF 160
           Y K   L DA KLFD MP +   ++   I  Y  + + + ++ L+  +   G  L+   F
Sbjct: 160 YGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTF 219

Query: 161 TAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-- 218
              LK    +        V     K G+ S  FV  +++  ++ C  +  AR++FD +  
Sbjct: 220 PCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPE 279

Query: 219 ---------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKS 263
                           N    EAL  F +M+     PN +TF   L+AC     I+    
Sbjct: 280 KEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMF 339

Query: 264 AHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDL 323
            H   LK+ Y ++++VA AL+ +Y + G++  A  IF  M   D I W+ M++ + Q  L
Sbjct: 340 IHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGL 399

Query: 324 SIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNA 383
             +A++ +  MR A   P+    +S++ A A       G QIH+  ++ GL SD+ V N+
Sbjct: 400 YHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNS 459

Query: 384 LMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPAT 443
           L+D+YAK   M+    +F + P ++ V+W T+I G+ Q G   +A+ +F ++  E +   
Sbjct: 460 LVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLD 519

Query: 444 EVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFD 503
            +  SS+L AC+ L  +    ++H   ++     D+V+ N ++D+Y +CG++  A  +F+
Sbjct: 520 VMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQNGIVDVYGECGNVDYAARMFE 578

Query: 504 MMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQ 563
           ++   + VSW +MIS Y  +GL+ E L++F LM++ G  P++++ V +LSA ++   L++
Sbjct: 579 LIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKK 638

Query: 564 GEAYFKSMV-ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           G+     ++   + +E  +   +++V +  R G L+K+  +   I     +++W +++ A
Sbjct: 639 GKEIHGFLIRKGFVLEGSLA--STLVDMYARCGTLEKSRNVFNFIR-NKDLVLWTSMINA 695

Query: 623 CIIH 626
             +H
Sbjct: 696 YGMH 699



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 191/345 (55%), Gaps = 3/345 (0%)

Query: 217 GLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
           G  N+ F+   + F+      F  +   ++ VL+ C     +   +  H   + +    +
Sbjct: 90  GSVNEAFQSLTDLFANQSPSQFSLDE-AYSSVLELCGSKKALSEGQQVHAHMITSNALFN 148

Query: 277 -LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
            ++++  L+ +Y K G + +A ++F+ MP K +  W+ MI  Y      + ++EL+  MR
Sbjct: 149 SVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMR 208

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
            + +  +  TF  +L+AC  ++    G ++H L ++ G +S VFV+N+++ +Y KC  + 
Sbjct: 209 VSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLN 268

Query: 396 NSVELFAESP-KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
            + +LF   P K + V+WN+MI  Y   G+  +A+ +F +M +  +     T+ + L+AC
Sbjct: 269 GARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQAC 328

Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
              + ++ GM +H   +K++Y ++V VANALI MYA+ G + +A  +F  M+DW+ +SWN
Sbjct: 329 EDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWN 388

Query: 515 AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGG 559
           +M+SG+  +GL  E L+ +  M+  G +P+ +  + +++A +  G
Sbjct: 389 SMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSG 433



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/488 (24%), Positives = 235/488 (48%), Gaps = 21/488 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N++++  +LQ+C  +  ++  M IH  VLK    +++F  N L+ +Y +  ++ +A  +F
Sbjct: 317 NTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIF 376

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             M + +TIS+ + + G+  +  + EA+  +  +   G + +  A  + +      G   
Sbjct: 377 YNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTL 436

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------- 218
               + A   K G DS+  VG +L+D ++    +++   +FD +                
Sbjct: 437 NGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHA 496

Query: 219 FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            N     AL  F +++  G   +    + +L AC GL  I   K  H   ++     DL 
Sbjct: 497 QNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLV 555

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           +   ++D+Y + G +  A R+FE +  KDV+ W+ MI+ Y    L+ +A+ELF  M++  
Sbjct: 556 LQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETG 615

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           V P+  + VS+L A A++  L  G +IH  ++R G + +  +++ L+D+YA+CG +E S 
Sbjct: 616 VEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSR 675

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            +F     ++ V W +MI  Y   G    A+ +F +M +E +    + + +VL AC+   
Sbjct: 676 NVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSG 735

Query: 459 ALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNA 515
            +  G +    ++K  Y ++    +   L+D+  +   + +A + V  M  +     W A
Sbjct: 736 LMNEGRRF-LESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCA 794

Query: 516 MISGYSMH 523
           ++    +H
Sbjct: 795 LLGACQIH 802



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/330 (30%), Positives = 173/330 (52%), Gaps = 11/330 (3%)

Query: 340 APNQFT----FVSVLQACATMEGLDLGNQIHS-LVVRVGLLSDVFVSNALMDVYAKCGRM 394
           +P+QF+    + SVL+ C + + L  G Q+H+ ++    L + VF+S  L+ +Y KCG +
Sbjct: 107 SPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCL 166

Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
            ++ +LF   P +   TWN MI  YV  GE   ++ ++ +M    +P    T+  +L+AC
Sbjct: 167 VDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKAC 226

Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE-VSW 513
             L     G +VH L +K  Y   V VAN+++ MY KC  +  AR +FD M +  + VSW
Sbjct: 227 GLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSW 286

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV- 572
           N+MIS YS +G S E L++F  MQ+    PN  TFV  L AC +   ++QG     +++ 
Sbjct: 287 NSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLK 346

Query: 573 ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIG 632
           ++Y I   + +  +++++  R G + +AA +   +    ++  W ++L    + N +   
Sbjct: 347 SSYYINVFVAN--ALIAMYARFGKMGEAANIFYNMDDWDTIS-WNSMLSG-FVQNGLYHE 402

Query: 633 RLSAQHILDFEPEDEATHVLLSNIYAMARS 662
            L   H +    +      ++S I A ARS
Sbjct: 403 ALQFYHEMRDAGQKPDLVAVISIIAASARS 432


>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
 gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
          Length = 745

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 274/793 (34%), Positives = 418/793 (52%), Gaps = 96/793 (12%)

Query: 56  SHSYATSLQSCIQNDDLQTAMTIHCQVLKK-GNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           S  YA  L +  + +    A  +HC +L+   +    +  N LL  Y K  R   A ++F
Sbjct: 6   SSQYAALLSAAARTEP-HVAGALHCVILRTLPHPPPTYLLNHLLTAYGKAGRHARARRVF 64

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D MP  N  ++                  L STL             A  ++L  M    
Sbjct: 65  DAMPHPNLFTYN----------------ALLSTL-------------AHARLLSDM---- 91

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMR 234
               +FA + +     +     A+I  FS  G    A +V+  L        L   S +R
Sbjct: 92  --EALFASMTQ----RDIVSYNAVIAGFSGGGSHAQAVRVYLAL--------LQADSSVR 137

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
                P+  T + ++ A   L    + K  H   L+  +  + +V   L+D+Y K   + 
Sbjct: 138 -----PSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVG 192

Query: 295 NA-------------------------------RRIFEEMPKKDVIPWSFMIARYAQTDL 323
           +A                               RR+FE M  +D I W+ M+  + Q  L
Sbjct: 193 DAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGL 252

Query: 324 SIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNA 383
             +A+E+F RMR   +A +Q+TF S+L AC  +  L+ G QIH+ ++R     +VFV +A
Sbjct: 253 ESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSA 312

Query: 384 LMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPAT 443
           L+D+Y+KC  ++ +  +F     +N ++W  +IVGY Q G   +A+ +FS+M  + +   
Sbjct: 313 LVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPD 372

Query: 444 EVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFD 503
           + T  SV+ +CA+LA+LE G Q HCL + +     + V+NAL+ +Y KCGSI DA  +FD
Sbjct: 373 DYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFD 432

Query: 504 MMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQ 563
            M+  ++VSW A++SGY+  G + E + +F+ M  +G +P+ +TF+GVLSACS  G +E+
Sbjct: 433 EMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEK 492

Query: 564 GEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGAC 623
           G +YF SM  ++GI P  +HYT M+ L  R+G L +A + I+ +P  P  + W  LL AC
Sbjct: 493 GRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSAC 552

Query: 624 IIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPG 672
            +  ++EIG+ +A+++L+ +P++ A++VLL +++A    W + A            KEPG
Sbjct: 553 RLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPG 612

Query: 673 LSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKER 732
            SWI+ +  VH F A D SH     I   LEWLN K  + GY PD+S+VL DV + +K  
Sbjct: 613 CSWIKYKNKVHIFSADDQSHPCSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVH 672

Query: 733 YLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFH 792
            +  HSEKLA+AF L  +P   PIRI+KNLR+CVDCH A K ISKI  R+I++RD  RFH
Sbjct: 673 MVSHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFH 732

Query: 793 HFQDGCCSCGDFW 805
            F DG CSCGDFW
Sbjct: 733 KFSDGVCSCGDFW 745



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 212/447 (47%), Gaps = 68/447 (15%)

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC-YEMDLYVAVALLDLYTKSGEISNAR 297
           +P +  +A +L A    +   VA + H   L+T  +    Y+   LL  Y K+G  + AR
Sbjct: 3   RPLSSQYAALLSAAARTEP-HVAGALHCVILRTLPHPPPTYLLNHLLTAYGKAGRHARAR 61

Query: 298 RIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ--------------------- 336
           R+F+ MP  ++  ++ +++  A   L  D   LF  M Q                     
Sbjct: 62  RVFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQ 121

Query: 337 ------------AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNAL 384
                       + V P++ T  +++ A + +    LG Q H  ++R+G  ++ FV + L
Sbjct: 122 AVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPL 181

Query: 385 MDVYAK-------------------------------CGRMENSVELFAESPKRNHVTWN 413
           +D+YAK                               C  +E +  LF     R+ +TW 
Sbjct: 182 VDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWT 241

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
           TM+ G+ Q G   +A+ +F +M  + +   + T+ S+L AC +L+ALE G Q+H   ++ 
Sbjct: 242 TMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRT 301

Query: 474 NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVF 533
            YD +V V +AL+DMY+KC SI  A  VF  M   N +SW A+I GY  +G S E ++VF
Sbjct: 302 RYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVF 361

Query: 534 DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGR 593
             MQ+ G  P++ T   V+S+C+N   LE+G A F  +    G+   I    ++V+L G+
Sbjct: 362 SEMQRDGIDPDDYTLGSVISSCANLASLEEG-AQFHCLALVSGLMHYITVSNALVTLYGK 420

Query: 594 AGHLDKAAKLIEGIPFQPSVMIWRALL 620
            G ++ A +L + + F   V  W AL+
Sbjct: 421 CGSIEDAHRLFDEMSFHDQVS-WTALV 446



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 128/285 (44%), Gaps = 26/285 (9%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
            + +++ + L +C     L+    IH  +++     ++F  + L+++Y K   +  A  +
Sbjct: 270 IDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETV 329

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV---LVSM 170
           F  M  +N IS+   I GY  +    EAV +FS + R+G + + +   + +     L S+
Sbjct: 330 FRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASL 389

Query: 171 GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-FNDCF------ 223
                  C+ A V  L H     V  AL+  +  CG +E A ++FD + F+D        
Sbjct: 390 EEGAQFHCL-ALVSGLMH--YITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALV 446

Query: 224 ---------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT--C 272
                    +E ++ F +M A G KP+  TF  VL AC     +   +S      K    
Sbjct: 447 SGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGI 506

Query: 273 YEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
             +D +    ++DLY++SG++  A    ++MP   D I W  +++
Sbjct: 507 VPIDDHY-TCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLS 550


>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Glycine max]
          Length = 824

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 267/765 (34%), Positives = 411/765 (53%), Gaps = 33/765 (4%)

Query: 71  DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQ 130
           ++  A  +H  +L  G   D+     L+ +Y  L  L  ++  F  +  +N  S+ + + 
Sbjct: 63  NINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVS 122

Query: 131 GYTVSSQFVEAVGLFSTL-HREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHD 189
            Y    ++ +++   + L    G   + + F   LK  +S+   E   C    V K+G +
Sbjct: 123 AYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLADGEKMHC---WVLKMGFE 179

Query: 190 SNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQM 233
            + +V  +LI  +S  G VE A KVF  +                 N    EAL    +M
Sbjct: 180 HDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRM 239

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
           +    K +  T + +L  C   + +      H   +K   E D++V+ AL+++Y+K G +
Sbjct: 240 KTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRL 299

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
            +A+R+F+ M  +D++ W+ +IA Y Q D  + A+  F  M    + P+  T VS+    
Sbjct: 300 QDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIF 359

Query: 354 ATMEGLDLGNQIHSLVVRVGLLS-DVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTW 412
             +    +G  +H  VVR   L  D+ + NAL+++YAK G ++ +  +F + P R+ ++W
Sbjct: 360 GQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISW 419

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQ-VPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
           NT+I GY Q G   +A+  ++ M E + +   + T+ S+L A + + AL+ GM++H   +
Sbjct: 420 NTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLI 479

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
           K    +DV VA  LIDMY KCG + DA  +F  +     V WNA+IS   +HG   + L+
Sbjct: 480 KNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQ 539

Query: 532 VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLL 591
           +F  M+  G + +++TFV +LSACS+ GL+++ +  F +M   Y I+P ++HY  MV L 
Sbjct: 540 LFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLF 599

Query: 592 GRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHV 651
           GRAG+L+KA  L+  +P Q    IW  LL AC IH N E+G  ++  +L+ + E+   +V
Sbjct: 600 GRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDRLLEVDSENVGYYV 659

Query: 652 LLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRG 700
           LLSNIYA    WE A             K PG S +    +V  F AG+ SH     I  
Sbjct: 660 LLSNIYANVGKWEGAVKVRSLARDRGLRKTPGWSSVVVGSVVEVFYAGNQSHPQCAEIYE 719

Query: 701 MLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIK 760
            L  LN K +  GY+PD S VL+DV EDEKE  L  HSE+LA+ F +   PP SPIRI K
Sbjct: 720 ELRVLNAKMKSLGYVPDYSFVLQDVEEDEKEEILTSHSERLAIVFGIISTPPKSPIRIFK 779

Query: 761 NLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           NLR+C DCH A K ISKI +REII+RD +RFHHF+DG CSCGD+W
Sbjct: 780 NLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGICSCGDYW 824



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 109/491 (22%), Positives = 215/491 (43%), Gaps = 30/491 (6%)

Query: 7   YKTFSCKQLTHQSKINAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSH-------SY 59
           Y  F   ++ H+  ++  +R + +  A+ +  C N         +    +        + 
Sbjct: 192 YSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTV 251

Query: 60  ATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPE 119
           ++ L  C Q++D+   + +H  V+K G   D+F +N L+N+Y K  RL DA ++FD M  
Sbjct: 252 SSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEV 311

Query: 120 RNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCV 179
           R+ +S+ + I  Y  +   V A+G F  +   G   +     +   +   +    +   V
Sbjct: 312 RDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAV 371

Query: 180 FACVYKLGH-DSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDC 222
              V +    + +  +G AL++ ++  G ++ AR VF+ L                 N  
Sbjct: 372 HGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGL 431

Query: 223 FEEALNFFSQM-RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
             EA++ ++ M       PN  T+  +L A   +  ++     HG  +K C  +D++VA 
Sbjct: 432 ASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVAT 491

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
            L+D+Y K G + +A  +F E+P++  +PW+ +I+          A++LF  MR   V  
Sbjct: 492 CLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKA 551

Query: 342 NQFTFVSVLQACATMEGLDLGNQ-IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           +  TFVS+L AC+    +D       ++     +  ++     ++D++ + G +E +  L
Sbjct: 552 DHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNL 611

Query: 401 FAESP-KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC-ASLA 458
            +  P + +   W T++      G          ++LE  V +  V Y  +L    A++ 
Sbjct: 612 VSNMPIQADASIWGTLLAACRIHGNAELGTFASDRLLE--VDSENVGYYVLLSNIYANVG 669

Query: 459 ALEPGMQVHCL 469
             E  ++V  L
Sbjct: 670 KWEGAVKVRSL 680


>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
 gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
          Length = 781

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 259/771 (33%), Positives = 403/771 (52%), Gaps = 28/771 (3%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           LQ C    ++     +H  V  +G   +      L+ +Y +   +P+A ++F+ +  ++ 
Sbjct: 11  LQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKDV 70

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
            ++   I  Y     +  A+G+F  +  E        + A L    S    +    +   
Sbjct: 71  FAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQ 130

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN----------------DCFEEA 226
           + + G + + FVGTALI+ ++ CG V  A   F  L +                D F  A
Sbjct: 131 ILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALA 190

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
              + +M+  G  PN  T   V  A    + +   K  +G       E D+ V  + +++
Sbjct: 191 RWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNM 250

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           +  +G + +ARR+FE+M  +DV+ W+ +I  Y Q +   +AV LF R++Q  V  N  TF
Sbjct: 251 FGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITF 310

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
           V +L    ++  L  G  IH LV   G   D  V+ ALM +Y +C     + ++F +   
Sbjct: 311 VLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGS 370

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
           ++ +TW  M V Y Q G   +A+ +F +M  E    T  T  +VL  CA LAAL+ G Q+
Sbjct: 371 KDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQI 430

Query: 467 HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLS 526
           H   ++  + M++VV  ALI+MY KCG + +A  VF+ M   + + WN+M+  Y+ HG  
Sbjct: 431 HSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYY 490

Query: 527 AEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTS 586
            E L++F+ MQ  G + + ++FV VLSA S+ G +  G  YF +M+ ++ I P  E Y  
Sbjct: 491 DETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGC 550

Query: 587 MVSLLGRAGHLDKAAKLIEGIPF-QPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPE 645
           +V LLGRAG + +A  ++  +    P  ++W  LLGAC  HN  +  + +A+ +L+ +P 
Sbjct: 551 VVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPS 610

Query: 646 DEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHAD 694
               +V+LSN+YA A  W+           +   KEPG S IE    VH F  GD SH  
Sbjct: 611 HSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPR 670

Query: 695 MNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSS 754
            + I   L+ LN + R AGYIPD   +L DV ++ KE  L+ HSE+LA+AF L   PP +
Sbjct: 671 RHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGLISTPPGT 730

Query: 755 PIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           P+R+IKNLR+C DCHTA K ISK+  REI++RD HRFH+F+DG CSC D+W
Sbjct: 731 PLRVIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNFKDGRCSCKDYW 781



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/461 (26%), Positives = 208/461 (45%), Gaps = 23/461 (4%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +Y   L +C   + L+  M IH Q+L++G   D+F    L+N+Y K   +  A   F  +
Sbjct: 107 TYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRL 166

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
             R+ +S+   I       QF  A  L+  +  +G   N               +     
Sbjct: 167 EHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGK 226

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------ND 221
            V+  V     +S+  V  + ++ F   G +  AR++F+ +                 N+
Sbjct: 227 FVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNE 286

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
            F EA+  F +++  G K N+ TF  +L     L ++   K  H    +  Y+ D  VA 
Sbjct: 287 NFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVAT 346

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           AL+ LY +      A +IF +M  KDVI W+ M   YAQ     +A++LF  M+     P
Sbjct: 347 ALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRP 406

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
              T V+VL  CA +  L  G QIHS ++      ++ V  AL+++Y KCG+M  ++ +F
Sbjct: 407 TSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVF 466

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
            +  KR+ + WN+M+  Y Q G   + + +F++M  + V A  V++ SVL A +   ++ 
Sbjct: 467 EKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVT 526

Query: 462 PGMQVHCLTVKANYDMDVVVANAL----IDMYAKCGSITDA 498
            G Q     ++   D  +     L    +D+  + G I +A
Sbjct: 527 DGYQYFVAMLQ---DFSITPTPELYGCVVDLLGRAGRIQEA 564



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 182/355 (51%), Gaps = 1/355 (0%)

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
           KP+   F  +L+ C     +   +  H       +E +  V   L+ +Y + G +  A++
Sbjct: 1   KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           +FE + +KDV  W+ MI  Y Q      A+ +F +M++  V P + T+V++L ACA+ E 
Sbjct: 61  VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           L  G +IH  +++ G   DVFV  AL+++Y KCG +  + + F     R+ V+W  MI  
Sbjct: 121 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAA 180

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
            VQ  +   A  ++ +M  + V   ++T  +V  A      L  G  V+ L      + D
Sbjct: 181 CVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESD 240

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
           V V N+ ++M+   G + DAR +F+ M D + V+WN +I+ Y  +    E +++F  +QQ
Sbjct: 241 VRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQ 300

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGR 593
            G + N++TFV +L+  ++   L +G+     +V   G +      T+++SL GR
Sbjct: 301 DGVKANDITFVLMLNVYTSLTSLAKGKV-IHELVKEAGYDRDAVVATALMSLYGR 354


>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 585

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 243/585 (41%), Positives = 359/585 (61%), Gaps = 12/585 (2%)

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           MR  G  PN FTF+ +L A      +   +  H    K  ++ +++V  AL+D+Y K  +
Sbjct: 1   MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCAD 60

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR-MRQAFVAPNQFTFVSVLQ 351
           + +A R+F++MP+++++ W+ MI  +   +L   AV +F   +R+  V PN+ +  SVL 
Sbjct: 61  MHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLS 120

Query: 352 ACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
           ACA M GL+ G Q+H +VV+ GL+   +V N+LMD+Y KC   +  V+LF     R+ VT
Sbjct: 121 ACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVT 180

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
           WN +++G+VQ  +  +A   F  M  E +   E ++S+VL + ASLAAL  G  +H   +
Sbjct: 181 WNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQII 240

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
           K  Y  ++ +  +LI MYAKCGS+ DA  VF+ + D N +SW AMIS Y +HG + +V++
Sbjct: 241 KLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIE 300

Query: 532 VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLL 591
           +F+ M   G  P+++TFV VLSACS+ G +E+G A+F SM   + + P  EHY  MV LL
Sbjct: 301 LFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLL 360

Query: 592 GRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHV 651
           GRAG LD+A + IE +P +P+  +W ALLGAC  + N+++GR +A+ + + EP +   +V
Sbjct: 361 GRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYV 420

Query: 652 LLSNIYAMARSWEKA-----------ASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRG 700
           LL+N+   +   E+A             KEPG SWI+ + M   F A D SH+  + I  
Sbjct: 421 LLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYK 480

Query: 701 MLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIK 760
           MLE L    +K GY+ +   V   + E+E+E+ LW HSEKLALAF L  +P  SPIRI K
Sbjct: 481 MLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLLTLPIDSPIRIKK 540

Query: 761 NLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           NLR C  CHT +K+ SKI  REII+RD++RFH F DG CSCGD+W
Sbjct: 541 NLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 585



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 147/312 (47%), Gaps = 22/312 (7%)

Query: 65  SCIQNDDLQTAMTIHCQVL-----KKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPE 119
           S I +    T M +H Q L     K G   ++F    L+++Y K   +  A ++FD+MPE
Sbjct: 14  SSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPE 73

Query: 120 RNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHEL-NPFAFTAFLKVLVSMGWAELCPC 178
           RN +S+ + I G+  ++ +  AVG+F  + RE   + N  + ++ L    +MG       
Sbjct: 74  RNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQ 133

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDC 222
           V   V K G     +V  +L+D +  C   +   K+F  +                 ND 
Sbjct: 134 VHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDK 193

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
           FEEA N+F  MR  G  P+  +F+ VL +   L  +    + H   +K  Y  ++ +  +
Sbjct: 194 FEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGS 253

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+ +Y K G + +A ++FE +   +VI W+ MI+ Y     +   +ELF  M    + P+
Sbjct: 254 LITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPS 313

Query: 343 QFTFVSVLQACA 354
             TFV VL AC+
Sbjct: 314 HVTFVCVLSACS 325



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 78/338 (23%), Positives = 144/338 (42%), Gaps = 29/338 (8%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  S ++ L +C     L     +H  V+K G     +  N L+++Y K     +  KLF
Sbjct: 111 NEVSVSSVLSACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLF 170

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             + +R+ +++   + G+  + +F EA   F  + REG   +  +F+  L    S+    
Sbjct: 171 QCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALH 230

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------- 218
               +   + KLG+  N  +  +LI  ++ CG +  A +VF+G+                
Sbjct: 231 QGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQ 290

Query: 219 FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKS-AHGCALKTCYEMDL 277
            + C  + +  F  M + G +P++ TF  VL AC    T RV +  AH  ++K  ++M+ 
Sbjct: 291 LHGCANQVIELFEHMLSEGIEPSHVTFVCVLSAC--SHTGRVEEGLAHFNSMKKIHDMNP 348

Query: 278 YVA--VALLDLYTKSGEISNARRIFEEMPKKDVIP-WSFMIA---RYAQTDLSIDAVELF 331
                  ++DL  ++G +  A+R  E MP K     W  ++    +Y    +  +A E  
Sbjct: 349 GPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERL 408

Query: 332 CRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
             M       N   +V +   C     L+  N++  L+
Sbjct: 409 FEMEPY----NPGNYVLLANMCTRSGRLEEANEVRRLM 442


>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
 gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
          Length = 924

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 271/785 (34%), Positives = 413/785 (52%), Gaps = 39/785 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           ++ ++ + +++C    D++    IH  V+K G  LD+F  N L+ +Y K   + +A K+F
Sbjct: 145 DNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVF 204

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLF-STLHREGHELNPFAFTAFLKVLVSMGWA 173
           D MPE N +S+ + I  ++ +    ++  L    L  EG   +       L V    G  
Sbjct: 205 DFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEV 264

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF------------------ 215
           ++   +     KLG      V  A++  +S CG +  A+  F                  
Sbjct: 265 DIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAF 324

Query: 216 --DGLFNDCFEEALNFFSQMRAVG--FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT 271
             +G  N    EA N   +M+  G   K N  T   VL ACL    +R  K  HG + + 
Sbjct: 325 SLEGDVN----EAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRH 380

Query: 272 CYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELF 331
           C++  + ++ A +  Y K G +++A ++F  +  K V  W+ +I  +AQ      A+ L 
Sbjct: 381 CFQ-HVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLL 439

Query: 332 CRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC 391
            +M  +   P+ FT  S+L ACA ++ L  G +IH  V+R GL +D FV  +L+  Y  C
Sbjct: 440 FQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHC 499

Query: 392 GRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVL 451
           G+  ++  LF     +N V+WN MI GY Q G   +++ +F K L E + + E+   SV 
Sbjct: 500 GKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVF 559

Query: 452 RACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEV 511
            AC+ L+AL  G + H   +KA    D  V  ++IDMYAK G I ++R VFD + D N  
Sbjct: 560 GACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVA 619

Query: 512 SWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSM 571
           SWNA+I  + +HG   E +++++ M++ G  P+  T++G+L AC + GL+E+G  YFK M
Sbjct: 620 SWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEM 679

Query: 572 VANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEI 631
                IEP +EHY  ++ +L RAG LD A +L+  +P +    IW +LL +C     +EI
Sbjct: 680 QNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEI 739

Query: 632 GRLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQG 680
           G   A+ +L+ EP+    +VLLSN+YA    W           E    K+ G SWIE  G
Sbjct: 740 GEKVAKKLLELEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCSWIEVGG 799

Query: 681 MVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEK 740
            V+ F  GD+       IR +   L  +  + GY P+ S+VL +V E+EK   L  HSEK
Sbjct: 800 RVYSFVVGDSLQPKSAEIRVIWRRLEERISEIGYKPNTSSVLHEVGEEEKIDILRGHSEK 859

Query: 741 LALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCS 800
           LA++F L K    + +RI KNLRIC DCH A K+ISK V+REI++RD  RFHHF+DG CS
Sbjct: 860 LAISFGLLKTTKGTTLRIYKNLRICADCHNAAKLISKAVEREIVVRDNKRFHHFRDGLCS 919

Query: 801 CGDFW 805
           C D+W
Sbjct: 920 CCDYW 924



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 161/597 (26%), Positives = 275/597 (46%), Gaps = 44/597 (7%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNV-LLNVYVKLNRLPDATKLFDEMPERN 121
           LQ+C    D++T   +H  V    +  + +  N  L+ +Y       D+  +FD M  +N
Sbjct: 50  LQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKN 109

Query: 122 TISFVTTIQGYTVSSQFVEAVGLFSTLHREGH-ELNPFAFTAFLKVLVSMGWAELCPCVF 180
            I +   + GYT +  + + V +F  L  +   + + F F + +K    +    L   + 
Sbjct: 110 LIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIH 169

Query: 181 ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--------------------GLFN 220
             V K+G   + FVG AL+  +  CG V+ A KVFD                    G   
Sbjct: 170 GMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSR 229

Query: 221 DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
           D F+  +    +    G  P+  T   +L  C G   + +    HG A+K     ++ V 
Sbjct: 230 DSFDLLMEMLGEE---GLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVN 286

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV- 339
            A++ +Y+K G ++ A+  F +   K+V+ W+ MI+ ++   L  D  E F  +++  + 
Sbjct: 287 NAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFS---LEGDVNEAFNLLQEMQIQ 343

Query: 340 ----APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
                 N+ T ++VL AC     L    ++H    R      V +SNA +  YAKCG + 
Sbjct: 344 GEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFR-HCFQHVELSNAFILAYAKCGALN 402

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
           ++ ++F     +   +WN +I G+ Q G+  KA+ +  +M          T SS+L ACA
Sbjct: 403 SAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACA 462

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
            L +L+ G ++H   ++   + D  V  +L+  Y  CG  + AR++FD M D N VSWNA
Sbjct: 463 HLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNA 522

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG-EAY---FKSM 571
           MISGYS +GL  E L +F      G + + +  V V  ACS    L  G EA+    K++
Sbjct: 523 MISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKAL 582

Query: 572 VANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
                   C     S++ +  ++G + ++ K+ +G+    +V  W A++ A  IH +
Sbjct: 583 QTEDAFVGC-----SIIDMYAKSGCIKESRKVFDGLK-DKNVASWNAIIVAHGIHGH 633



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/387 (30%), Positives = 201/387 (51%), Gaps = 14/387 (3%)

Query: 244 TFAFVLKACLGLDTIRVAKSAHG-CALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEE 302
               +L+AC     I   +  H   +  T Y  D  +   L+ +Y   G   ++R +F+ 
Sbjct: 45  AIGLLLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDN 104

Query: 303 MPKKDVIPWSFMIARYAQTDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQACATMEGLDL 361
           M  K++I W+ +++ Y +  L  D V++F  +       P+ FTF SV++AC  +  + L
Sbjct: 105 METKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRL 164

Query: 362 GNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQ 421
           G  IH +V+++GL+ DVFV NAL+ +Y KCG ++ ++++F   P+ N V+WN+MI  + +
Sbjct: 165 GEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSE 224

Query: 422 LGEVGKAMIMFSKML-EEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV 480
            G    +  +  +ML EE +    VT  ++L  CA    ++ GM +H L VK     +V+
Sbjct: 225 NGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVM 284

Query: 481 VANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG 540
           V NA++ MY+KCG + +A++ F   N+ N VSWN MIS +S+ G   E   +   MQ +G
Sbjct: 285 VNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQG 344

Query: 541 --WRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY---TSMVSLLGRAG 595
              + N +T + VL AC     L++ +      +  Y    C +H     + +    + G
Sbjct: 345 EEMKANEVTILNVLPAC-----LDKLQLRSLKELHGYSFRHCFQHVELSNAFILAYAKCG 399

Query: 596 HLDKAAKLIEGIPFQPSVMIWRALLGA 622
            L+ A K+  GI    +V  W AL+G 
Sbjct: 400 ALNSAEKVFHGIG-DKTVSSWNALIGG 425



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 133/290 (45%), Gaps = 24/290 (8%)

Query: 47  ITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNR 106
           +T+S  + +  + ++ L +C     LQ    IH  VL+ G   D F    LL+ Y+   +
Sbjct: 442 MTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGK 501

Query: 107 LPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV 166
              A  LFD M ++N +S+   I GY+ +    E++ LF     EG + +  A  +    
Sbjct: 502 ASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGA 561

Query: 167 LVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF--- 223
              +    L       V K     +AFVG ++ID ++  GC++ +RKVFDGL +      
Sbjct: 562 CSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASW 621

Query: 224 -------------EEALNFFSQMRAVGFKPNNFTFAFVLKAC--LGL--DTIRVAKSAHG 266
                        +EA+  + +M+ VG  P+ FT+  +L AC   GL  + ++  K    
Sbjct: 622 NAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQN 681

Query: 267 CALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK-DVIPWSFMI 315
             L    E  L     L+D+  ++G + +A R+  EMP++ D   WS ++
Sbjct: 682 FNL---IEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLL 728


>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
 gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
          Length = 801

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 277/801 (34%), Positives = 426/801 (53%), Gaps = 55/801 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N H+    + +C    +L     IH Q+  +    +    N L+++Y K   L DA + F
Sbjct: 6   NCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAF 65

Query: 115 DEMP---ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHEL-NPFAFTAFLKVLVSM 170
           D +P   +R+ +++   I  +  +    EA+ LF  +  +G    N   F + L   V  
Sbjct: 66  DRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEA 125

Query: 171 GWAEL--CPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF------------- 215
           G   L     +   +   G +  AFV TAL+D++   G ++ A +VF             
Sbjct: 126 GLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLV 185

Query: 216 --DGLFNDCFE-----EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCA 268
               + + C++     E+L  F  M   G KP+  T   VL AC    ++    SA    
Sbjct: 186 TCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNAC----SMLPVGSATAFV 241

Query: 269 LKTCYEM-----DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDL 323
           L+   E+     D  +   LL  Y +S ++S AR  F+ +   DV+ W+ M A Y Q   
Sbjct: 242 LEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHR 301

Query: 324 SIDAVELFCRMRQAFVAPNQFTFVSVLQACAT---MEGLDLGNQIHSLVVRVGLLSDVFV 380
             +A+ LF RM    V P+  TF++ L ACA         +G +I SL+   GL  D  V
Sbjct: 302 PREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAV 361

Query: 381 SNALMDVYAKCGRMENSVELFAE-SP-KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE 438
           +NA +++YAKCG + ++  +F   SP +R+ +TWN+M+  Y   G   +A  +F  M  E
Sbjct: 362 ANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAE 421

Query: 439 Q-VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITD 497
           + V   +VT+ +VL A  S  ++  G ++H   V   ++ D V+ NAL++MYAKCGS+ D
Sbjct: 422 KLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDD 481

Query: 498 ARLVFDMMNDWNE--VSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSAC 555
           A+ +FD  +   E  ++W ++++GY+ +G +   LK+F  MQQ+G RPN++TF+  L+AC
Sbjct: 482 AQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTAC 541

Query: 556 SNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMI 615
           ++GG LEQG      M  ++GI P  +H++ +V LLGR G LD+A KL+E    Q  V+ 
Sbjct: 542 NHGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QADVIT 600

Query: 616 WRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS------- 668
           W ALL AC     +E G   A+ I+  +PE  +++++L+++YA A  W +AA+       
Sbjct: 601 WMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLD 660

Query: 669 ----KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRD 724
                +PG S +E    +H F AGD SH     I   LE L+   + AGY+ D   VL D
Sbjct: 661 KGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLVLHD 720

Query: 725 VREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREII 784
           V ++ KER L  HSEKLA+AF L   P  SP+R+IKNLR+C DCHTA K+ISK+  R+I+
Sbjct: 721 VSQEHKERLLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISKVTGRDIL 780

Query: 785 IRDVHRFHHFQDGCCSCGDFW 805
           +RD  R+HHF  G CSCGD+W
Sbjct: 781 MRDSSRYHHFTSGTCSCGDYW 801



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 193/405 (47%), Gaps = 28/405 (6%)

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
           +PN      ++ AC  L  +   +  H       +E +  +  AL+ +Y+K G + +A++
Sbjct: 4   RPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQ 63

Query: 299 IFEEMP---KKDVIPWSFMIARYAQTDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQAC- 353
            F+ +P   K+DV+ W+ MI+ + +   + +A++LF  M       PN  TFVSVL +C 
Sbjct: 64  AFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCV 123

Query: 354 -ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF----AESPKRN 408
            A +  L+    IH  +V  G+  + FV  AL+D Y K G ++++ E+F     E P  +
Sbjct: 124 EAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTS 183

Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA-------ALE 461
            VT + MI    Q G   +++ +F  M  E    + VT  SVL AC+ L         LE
Sbjct: 184 LVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVLE 243

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
             M+V   T       D V+   L+  YA+   ++ AR  FD +   + VSWNAM + Y 
Sbjct: 244 QAMEVVSAT------RDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYL 297

Query: 522 MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFK---SMVANYGIE 578
            H    E L +F+ M   G RP+  TF+  L+AC+     +   A  K   S++   G+E
Sbjct: 298 QHHRPREALVLFERMLLEGVRPSVATFITALTACA-AYPPQTASAIGKRIQSLLEEAGLE 356

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGI-PFQPSVMIWRALLGA 622
                  + +++  + G L  A  + E I P +   + W ++L A
Sbjct: 357 GDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAA 401



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 150/304 (49%), Gaps = 21/304 (6%)

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           V PN    ++++ AC+ +  L  G +IHS +       +  + NAL+ +Y+KCG + ++ 
Sbjct: 3   VRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAK 62

Query: 399 ELFAESP---KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQV-PATEVTYSSVLRAC 454
           + F   P   KR+ VTWN MI  +++ G   +A+ +F  M  +   P   VT+ SVL +C
Sbjct: 63  QAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSC 122

Query: 455 --ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE-- 510
             A L +LE    +H   V A  + +  V  AL+D Y K GS+ DA  VF   +D     
Sbjct: 123 VEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPST 182

Query: 511 --VSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYF 568
             V+ +AMIS    +G   E L++F  M   G +P+ +T V VL+ACS   +L  G A  
Sbjct: 183 SLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACS---MLPVGSA-- 237

Query: 569 KSMVANYGIEPCIEHY-----TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGAC 623
            + V    +E           T++++   R+  L +A    + I   P V+ W A+  A 
Sbjct: 238 TAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQ-SPDVVSWNAMAAAY 296

Query: 624 IIHN 627
           + H+
Sbjct: 297 LQHH 300


>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 952

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 267/813 (32%), Positives = 414/813 (50%), Gaps = 62/813 (7%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  + ++ L  C    DL++   IH  V++ G   D+F ++  +N Y K   + +A  +F
Sbjct: 140 NPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVF 199

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D MP R+ +++ +    Y       + + +F  +  +G + +P   +  L     +   +
Sbjct: 200 DLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLK 259

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------FNDCF- 223
               +     K G   N FV  AL++ +  C CV  A+ VFD +             C+ 
Sbjct: 260 SGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYV 319

Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                ++ LN F +M   G KP+    + +L AC  L  ++  K+ HG A+K     D++
Sbjct: 320 NCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVF 379

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V  AL++LY     +  A+ +F+ MP ++V+ W+ + + Y         + +F  M    
Sbjct: 380 VCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNG 439

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           V P+  T +S+L AC+ ++ L  G  IH   VR G++ DVFV NAL+ +YAKC  +  + 
Sbjct: 440 VKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQ 499

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYS---------- 448
            +F   P R   +WN ++  Y    E  K + MFS+M  ++V A E+T+S          
Sbjct: 500 VVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNS 559

Query: 449 -------------------------SVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN 483
                                    S+LRAC+    L  G ++HC   +   D D+   N
Sbjct: 560 RIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTN 619

Query: 484 ALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRP 543
           AL+DMYAKCG ++ +R VFDMM   +  SWN MI    MHG   E L +F+ M     +P
Sbjct: 620 ALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKP 679

Query: 544 NNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKL 603
           ++ TF  VLSACS+  L+E+G   F SM  ++ +EP  EHYT +V +  RAG L++A   
Sbjct: 680 DSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGF 739

Query: 604 IEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW 663
           I+ +P +P+ + W+A L  C ++ NVE+ ++SA+ + + +P   A +V L NI   A+ W
Sbjct: 740 IQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGSANYVTLFNILVTAKLW 799

Query: 664 -----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKA 712
                      E+  +K PG SW      VH F AGD S+ + + I   L+ L  K + A
Sbjct: 800 SEASKIRKLMKERGITKTPGCSWFHVGNRVHTFVAGDKSNMESDKIYNFLDELFAKIKAA 859

Query: 713 GYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAI 772
           GY PD   VL D+ ++EK   L  HSEKLA+AF +  +   S IR+ KNLRIC DCH AI
Sbjct: 860 GYKPDTDYVLHDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAI 919

Query: 773 KIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           K +S +V   I++RD  RFHHF++G CSC DFW
Sbjct: 920 KYMSNVVGVTIVVRDSLRFHHFKNGNCSCKDFW 952



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 159/638 (24%), Positives = 286/638 (44%), Gaps = 54/638 (8%)

Query: 64  QSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTI 123
           ++C  + D       H    + G   D+   N  ++ Y K   +  A ++FD++  R+ +
Sbjct: 48  KACAASRDALKVKQFHDDATRCGVMSDVSIGNAFIHAYGKCKCVEGARRVFDDLVARDVV 107

Query: 124 SFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACV 183
           ++ +    Y       + + +F  +     + NP   ++ L     +   +    +   V
Sbjct: 108 TWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFV 167

Query: 184 YKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------FNDCF------EEAL 227
            + G   + FV +A ++ ++ C CV  A+ VFD +           + C+      ++ L
Sbjct: 168 VRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGL 227

Query: 228 NFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLY 287
           N F +M   G KP+  T + +L AC  L  ++  K+ HG ALK     +++V+ AL++LY
Sbjct: 228 NVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLY 287

Query: 288 TKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFV 347
                +  A+ +F+ MP ++VI W+ + + Y         + +F  M    V P+     
Sbjct: 288 ESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMS 347

Query: 348 SVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKR 407
           S+L AC+ ++ L  G  IH   V+ G++ DVFV  AL+++YA C  +  +  +F   P R
Sbjct: 348 SILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHR 407

Query: 408 NHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVH 467
           N VTWN++   YV  G   K + +F +M+   V    VT  S+L AC+ L  L+ G  +H
Sbjct: 408 NVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIH 467

Query: 468 CLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN-----DWN------------- 509
              V+     DV V NAL+ +YAKC  + +A++VFD++       WN             
Sbjct: 468 GFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYE 527

Query: 510 -----------------EVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL 552
                            E++W+ +I G   +    E +++F  MQ  G++P+  T   +L
Sbjct: 528 KGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSIL 587

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
            ACS    L  G+      V  +  +  +    ++V +  + G L  +  + + +P +  
Sbjct: 588 RACSLSECLRMGKE-IHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIK-D 645

Query: 613 VMIWRALLGACIIH-NNVEIGRLSAQHILDFEPEDEAT 649
           V  W  ++ A  +H N  E   L  + +L     D AT
Sbjct: 646 VFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSAT 683



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 199/395 (50%), Gaps = 2/395 (0%)

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           EA+  ++  RA G KP+   F  V KAC         K  H  A +     D+ +  A +
Sbjct: 23  EAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFI 82

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
             Y K   +  ARR+F+++  +DV+ W+ + A Y         + +F +M    V  N  
Sbjct: 83  HAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPL 142

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           T  S+L  C+ ++ L  G +IH  VVR G++ DVFVS+A ++ YAKC  +  +  +F   
Sbjct: 143 TVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLM 202

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
           P R+ VTWN++   YV  G   K + +F +M+ + V    VT S +L AC+ L  L+ G 
Sbjct: 203 PHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGK 262

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
            +H   +K     +V V+NAL+++Y  C  + +A+ VFD+M   N ++WN++ S Y   G
Sbjct: 263 AIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCG 322

Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY 584
              + L VF  M   G +P+ +    +L ACS    L+ G+         +G+   +   
Sbjct: 323 FPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKT-IHGFAVKHGMVEDVFVC 381

Query: 585 TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRAL 619
           T++V+L      + +A  + + +P + +V+ W +L
Sbjct: 382 TALVNLYANCLCVREAQTVFDLMPHR-NVVTWNSL 415



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 87/197 (44%), Gaps = 2/197 (1%)

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
           G   +A+ +++      +   +  + +V +ACA+        Q H    +     DV + 
Sbjct: 19  GLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIG 78

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
           NA I  Y KC  +  AR VFD +   + V+WN++ + Y   G   + L VF  M     +
Sbjct: 79  NAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVK 138

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
            N LT   +L  CS+   L+ G+      V  +G+   +   ++ V+   +   + +A  
Sbjct: 139 ANPLTVSSILPGCSDLQDLKSGKE-IHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQT 197

Query: 603 LIEGIPFQPSVMIWRAL 619
           + + +P +  V+ W +L
Sbjct: 198 VFDLMPHR-DVVTWNSL 213


>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
          Length = 751

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 265/777 (34%), Positives = 399/777 (51%), Gaps = 96/777 (12%)

Query: 72  LQTAMTIHCQVLKKG-NCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQ 130
           ++ A  +HC +LK        F  N LL  Y K  RL  A ++FDEMP+ N  +    + 
Sbjct: 28  VRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLS 87

Query: 131 GYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDS 190
               S    +   LF+++                                        + 
Sbjct: 88  ALAHSRLVPDMERLFASMP---------------------------------------ER 108

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLK 250
           +A    ALI  FS  G    + +++  L              +R    +P   T + ++ 
Sbjct: 109 DAVSYNALITGFSSTGSPARSVQLYRAL--------------LREESVRPTRITLSAMIM 154

Query: 251 ACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK---- 306
               L    +  S H   L+  +    +V   L+D+Y K G I +ARR+F+EM  K    
Sbjct: 155 VASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVM 214

Query: 307 ---------------------------DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
                                      D I W+ M+    Q  L ++A+++F RMR   V
Sbjct: 215 YNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGV 274

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
             +Q+TF S+L AC  +   + G QIH+ + R     +VFV +AL+D+Y+KC  +  +  
Sbjct: 275 GIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEA 334

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +F     RN ++W  MIVGY Q     +A+  FS+M  + +   + T  SV+ +CA+LA+
Sbjct: 335 VFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLAS 394

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
           LE G Q HCL + +     + V+NAL+ +Y KCGSI DA  +FD M+  ++VSW A+++G
Sbjct: 395 LEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTG 454

Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
           Y+  G + E + +F+ M   G +P+ +TF+GVLSACS  GL+E+G  YF SM  ++ I P
Sbjct: 455 YAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVP 514

Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHI 639
             +HYT M+ L  R+G   +A + I+ +P  P    W  LL +C +  N+EIG+ +A+++
Sbjct: 515 IDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENL 574

Query: 640 LDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAG 688
           L+ +P++ A++VLL +++A    W + A            KEPG SWI+ +  VH F A 
Sbjct: 575 LETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSAD 634

Query: 689 DTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALF 748
           D SH   + I   LEWLN K  + GY PD+S+VL DV + +K   +  HSEKLA+AF L 
Sbjct: 635 DQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLI 694

Query: 749 KMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            +P   PIRI+KNLR+CVDCH A K ISKI  R+I++RD  RFH F DG CSCGDFW
Sbjct: 695 FVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 206/431 (47%), Gaps = 66/431 (15%)

Query: 254 GLDTIRVAKSAHGCALKTCYEMD-LYVAVALLDLYTKSGEISNARRIFEE---------- 302
           G   +RVA + H   LKT  +    ++   LL  Y KSG ++ ARR+F+E          
Sbjct: 24  GRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRN 83

Query: 303 ---------------------MPKKDVIPWSFMIARYAQTDLSIDAVELF-CRMRQAFVA 340
                                MP++D + ++ +I  ++ T     +V+L+   +R+  V 
Sbjct: 84  ALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVR 143

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           P + T  +++   + +    LG+ +H  V+R+G  +  FV + L+D+YAK G + ++  +
Sbjct: 144 PTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRV 203

Query: 401 FAESP-------------------------------KRNHVTWNTMIVGYVQLGEVGKAM 429
           F E                                  R+ +TW TM+ G  Q G   +A+
Sbjct: 204 FQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEAL 263

Query: 430 IMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMY 489
            +F +M  E V   + T+ S+L AC +LAA E G Q+H    +  Y+ +V V +AL+DMY
Sbjct: 264 DVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMY 323

Query: 490 AKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFV 549
           +KC SI  A  VF  M   N +SW AMI GY  +  S E ++ F  MQ  G +P++ T  
Sbjct: 324 SKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLG 383

Query: 550 GVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF 609
            V+S+C+N   LE+G A F  +    G+   I    ++V+L G+ G ++ A +L + + F
Sbjct: 384 SVISSCANLASLEEG-AQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSF 442

Query: 610 QPSVMIWRALL 620
              V  W AL+
Sbjct: 443 HDQVS-WTALV 452



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 81/211 (38%), Gaps = 21/211 (9%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           + SC     L+     HC  L  G    +  +N L+ +Y K   + DA +LFDEM   + 
Sbjct: 386 ISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQ 445

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +S+   + GY    +  E + LF  +   G + +   F   L      G  E     F  
Sbjct: 446 VSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDS 505

Query: 183 VYKLGHDSNAFVG--TALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKP 240
           + K  HD        T +ID +S  G                F+EA  F  QM      P
Sbjct: 506 MQK-DHDIVPIDDHYTCMIDLYSRSG---------------RFKEAEEFIKQM---PHSP 546

Query: 241 NNFTFAFVLKACLGLDTIRVAKSAHGCALKT 271
           + F +A +L +C     + + K A    L+T
Sbjct: 547 DAFGWATLLSSCRLRGNMEIGKWAAENLLET 577


>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 997

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 256/718 (35%), Positives = 393/718 (54%), Gaps = 34/718 (4%)

Query: 116 EMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAEL 175
           E+  RN I     + GY  + Q+   +  F  +     E +   F   L   V +    L
Sbjct: 286 EIISRNKI-----LSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLAL 340

Query: 176 CPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF---------------- 219
              V     KLG D    V  +LI+ +     +  AR VF+ +                 
Sbjct: 341 GQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQ 400

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGL-DTIRVAKSAHGCALKTCYEMDLY 278
           +D   EA+  F Q+   G KP+++T   VLKA   L + + ++K  H  A+KT    D +
Sbjct: 401 SDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSF 460

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V+ AL+D Y+++  +  A  +F      D++ W+ M++ Y Q+      +ELF  M +  
Sbjct: 461 VSTALIDAYSRNRCMKEAEVLFGR-NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQG 519

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
              + FT  +VL+ C  +  ++ G Q+H+  ++ G   D++VS+ ++D+Y KCG M  + 
Sbjct: 520 ERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQ 579

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
             F   P  + V W T+I G ++ GE  +A+ +FS+M    V   E T +++ +A + L 
Sbjct: 580 FAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLT 639

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           ALE G Q+H   +K N   D  V  +L+DMYAKCGSI DA  +F  +   N  +WNAM+ 
Sbjct: 640 ALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLV 699

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           G + HG   E L++F  M+  G +P+ +TF+GVLSACS+ GL+ +   Y +SM  +YGI+
Sbjct: 700 GLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIK 759

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P IEHY+ +   LGRAG + +A  LI+ +  + S  ++R LL AC +  + E G+  A  
Sbjct: 760 PEIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVATK 819

Query: 639 ILDFEPEDEATHVLLSNIYAMARSWEK-----------AASKEPGLSWIENQGMVHYFRA 687
           +L+ EP D + +VLLSN+YA A  W++              K+PG SWIE +  +H F  
Sbjct: 820 LLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHLFVV 879

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFAL 747
            D S+    +I   ++ +    ++ GY+P+    L DV E+EKER L+ HSEKLA+AF L
Sbjct: 880 DDRSNPQTELIYKKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGL 939

Query: 748 FKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
              PPS+PIR+IKNLR+C DCH A+K ISK+  REI++RD +RFH F+DG CSCGD+W
Sbjct: 940 LSTPPSTPIRVIKNLRVCGDCHNAMKYISKVYDREIVLRDANRFHRFKDGICSCGDYW 997



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 142/462 (30%), Positives = 237/462 (51%), Gaps = 19/462 (4%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L + ++ D L     +HC  LK G  L L  +N L+N+Y KL ++  A  +F+ M ER+ 
Sbjct: 329 LATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDL 388

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA-ELCPCVFA 181
           IS+ + I G   S   VEAV LF  L R G + + +  T+ LK   S+     L   +  
Sbjct: 389 ISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHV 448

Query: 182 CVYKLGHDSNAFVGTALIDAFSVCGCVE-----FARKVFDGLFNDCF----------EEA 226
              K  + +++FV TALIDA+S   C++     F R  FD +  +             + 
Sbjct: 449 HAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGRNNFDLVAWNAMMSGYTQSHDGHKT 508

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           L  F+ M   G + ++FT A VLK C  L  I   K  H  A+K+ Y++DL+V+  +LD+
Sbjct: 509 LELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDM 568

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y K G++S A+  F+ +P  D + W+ +I+   +      A+ +F +MR   V P++FT 
Sbjct: 569 YVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTI 628

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
            ++ +A + +  L+ G QIH+  +++   SD FV  +L+D+YAKCG ++++  LF     
Sbjct: 629 ATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM 688

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
            N   WN M+VG  Q GE  +A+ +F +M    +   +VT+  VL AC S + L      
Sbjct: 689 MNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSAC-SHSGLVSEAYK 747

Query: 467 HCLTVKANYDMDVVVA--NALIDMYAKCGSITDARLVFDMMN 506
           +  ++  +Y +   +   + L D   + G + +A  + D M+
Sbjct: 748 YIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENLIDSMS 789



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 141/591 (23%), Positives = 269/591 (45%), Gaps = 59/591 (9%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L+  I   DL      H ++L      + F  N L+++Y K   L  A ++FD+MPER+ 
Sbjct: 53  LRDAISTSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDL 112

Query: 123 ISFVTTIQGYTVSSQFV-----EAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
           +S+ + +  Y  SS+ V     EA  LF  L ++    +    +  LK+ +  G+     
Sbjct: 113 VSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASE 172

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-FNDCF------------- 223
                  K+G D + FV  AL++ +   G V+  R +F+ + + D               
Sbjct: 173 SFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMG 232

Query: 224 --EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
             EEA++  S     G  PN  T   +L    G D                         
Sbjct: 233 FKEEAIDLSSAFHTSGLHPNEITLR-LLSRISGDD------------------------- 266

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
                 +++G++ +     +     ++I  + +++ Y         ++ F  M ++ +  
Sbjct: 267 ------SEAGQVKSFENGNDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLEC 320

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           +Q TF+ VL     ++ L LG Q+H + +++GL   + VSN+L+++Y K  ++  +  +F
Sbjct: 321 DQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVF 380

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA-AL 460
               +R+ ++WN++I G  Q     +A+ +F ++L   +     T +SVL+A +SL   L
Sbjct: 381 NNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGL 440

Query: 461 EPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY 520
               Q+H   +K N   D  V+ ALID Y++   + +A ++F   N+++ V+WNAM+SGY
Sbjct: 441 SLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFG-RNNFDLVAWNAMMSGY 499

Query: 521 SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG-EAYFKSMVANYGIEP 579
           +      + L++F LM ++G R ++ T   VL  C     + QG + +  ++ + Y ++ 
Sbjct: 500 TQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDL 559

Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
            +   + ++ +  + G +  A    + IP  P  + W  L+  CI +   E
Sbjct: 560 WVS--SGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTLISGCIENGEEE 607



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 192/418 (45%), Gaps = 55/418 (13%)

Query: 162 AFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN- 220
            FL+  +S     L  C  A +  L  +   F+   LI  +S CG + +AR+VFD +   
Sbjct: 51  GFLRDAISTSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPER 110

Query: 221 --------------------DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRV 260
                               +  +EA   F  +R      +  T + +LK CL    +  
Sbjct: 111 DLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCA 170

Query: 261 AKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQ 320
           ++S HG A K   + D +VA AL+++Y K G++   R +FEEMP +DV+ W+ M+  Y +
Sbjct: 171 SESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLE 230

Query: 321 TDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL-GNQIHSLVVRVGLLSDVF 379
                +A++L      + + PN+ T    L+  + + G D    Q+ S            
Sbjct: 231 MGFKEEAIDLSSAFHTSGLHPNEIT----LRLLSRISGDDSEAGQVKSF----------- 275

Query: 380 VSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ 439
                          EN  +  A S     ++ N ++ GY+  G+    +  F  M+E  
Sbjct: 276 ---------------ENGNDASAVS---EIISRNKILSGYLHAGQYSALLKCFMDMVESD 317

Query: 440 VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR 499
           +   +VT+  VL     L +L  G QVHC+ +K   D+ + V+N+LI+MY K   I  AR
Sbjct: 318 LECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLAR 377

Query: 500 LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSN 557
            VF+ M++ + +SWN++I+G +   L  E + +F  + + G +P++ T   VL A S+
Sbjct: 378 TVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASS 435


>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 751

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 234/643 (36%), Positives = 365/643 (56%), Gaps = 28/643 (4%)

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMR 234
           N F+    ++ +S CG +++  K+FD +                 N  F+EAL+ F QMR
Sbjct: 109 NTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMR 168

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
             G     F  + VL+AC  L  I+     H   +K  +  +L+V   L D+Y+K GE+S
Sbjct: 169 IEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELS 228

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
           +A + FEEMP KD + W+ MI  + +      A+  + +M    V  +Q    S L AC+
Sbjct: 229 DACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACS 288

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA-ESPKRNHVTWN 413
            ++    G  +H+ ++++G   + F+ NAL D+Y+K G M ++  +F   S   + V+  
Sbjct: 289 ALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLT 348

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
            +I GYV++ ++ KA+  F  +    +   E T++S+++ACA+ A LE G Q+H   VK 
Sbjct: 349 AIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKF 408

Query: 474 NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVF 533
           N+  D  V++ L+DMY KCG    +  +FD + + +E++WN ++  +S HGL    ++ F
Sbjct: 409 NFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETF 468

Query: 534 DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGR 593
           + M  RG +PN +TFV +L  CS+ G++E G  YF SM   YG+ P  EHY+ ++ LLGR
Sbjct: 469 NGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGR 528

Query: 594 AGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLL 653
           AG L +A   I  +PF+P+V  W + LGAC IH ++E  + +A  ++  EPE+   HVLL
Sbjct: 529 AGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLL 588

Query: 654 SNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGML 702
           SNIYA  + WE   S           K PG SW++ +   H F   D SH     I   L
Sbjct: 589 SNIYAKEKQWEDVQSLRKMIKDGNMNKLPGYSWVDIRNKTHVFGVEDWSHPQKKEIYEKL 648

Query: 703 EWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNL 762
           + L  + ++ GY+P   +VL D+ ++ KE+ L  HSE++A+AF+L   P   PI + KNL
Sbjct: 649 DNLLDQIKRIGYVPQTESVLIDMDDNLKEKLLHYHSERIAVAFSLLTCPTGMPIIVKKNL 708

Query: 763 RICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           R+C DCH+A+K ISK+ +R II+RD+ RFHHF +G CSCGD+W
Sbjct: 709 RVCSDCHSALKFISKVTERNIIVRDISRFHHFSNGSCSCGDYW 751



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 134/495 (27%), Positives = 239/495 (48%), Gaps = 31/495 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           ++ + A  +Q+  +  +L     +H  +++ G   + F +N  LN+Y K   L    KLF
Sbjct: 74  DTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLF 133

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D+M +RN +S+ + I G+  +S+F EA+  F  +  EG     FA ++ L+   S+G  +
Sbjct: 134 DKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQ 193

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF---------------DGLF 219
               V   V K G     FVG+ L D +S CG +  A K F               DG  
Sbjct: 194 FGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFV 253

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            N  F++AL  + +M       +       L AC  L      KS H   LK  +E + +
Sbjct: 254 KNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETF 313

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPK-KDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
           +  AL D+Y+KSG++ +A  +F+       ++  + +I  Y + D    A+  F  +R+ 
Sbjct: 314 IGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRR 373

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            + PN+FTF S+++ACA    L+ G+Q+H  VV+     D FVS+ L+D+Y KCG  ++S
Sbjct: 374 GIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHS 433

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
           ++LF E    + + WNT++  + Q G    A+  F+ M+   +    VT+ ++L+ C+  
Sbjct: 434 IQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHA 493

Query: 458 AALEPGM-------QVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR-LVFDMMNDWN 509
             +E G+       +++ +  K  +       + +ID+  + G + +A   + +M  + N
Sbjct: 494 GMVEDGLNYFSSMEKIYGVVPKEEH------YSCVIDLLGRAGKLKEAEDFINNMPFEPN 547

Query: 510 EVSWNAMISGYSMHG 524
              W + +    +HG
Sbjct: 548 VFGWCSFLGACKIHG 562



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 207/399 (51%), Gaps = 6/399 (1%)

Query: 226 ALNFFSQMRAVGFK-PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           + +F   +   G K  +  T A +++       +   K  H   ++     + +++   L
Sbjct: 58  SFSFLKNLFGSGHKLSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFL 117

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
           +LY+K GE+    ++F++M +++++ W+ +I  +A      +A+  FC+MR       QF
Sbjct: 118 NLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQF 177

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
              SVLQAC ++  +  G Q+H LVV+ G   ++FV + L D+Y+KCG + ++ + F E 
Sbjct: 178 ALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEM 237

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
           P ++ V W +MI G+V+ G+  KA+  + KM+ + V   +    S L AC++L A   G 
Sbjct: 238 PCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGK 297

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND-WNEVSWNAMISGYSMH 523
            +H   +K  ++ +  + NAL DMY+K G +  A  VF + +D  + VS  A+I GY   
Sbjct: 298 SLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEM 357

Query: 524 GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA-NYGIEPCIE 582
               + L  F  +++RG  PN  TF  ++ AC+N   LE G      +V  N+  +P + 
Sbjct: 358 DQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVS 417

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLG 621
             +++V + G+ G  D + +L + I   P  + W  L+G
Sbjct: 418 --STLVDMYGKCGLFDHSIQLFDEIE-NPDEIAWNTLVG 453



 Score = 43.1 bits (100), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 83/201 (41%), Gaps = 19/201 (9%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N  ++ + +++C     L+    +H QV+K     D F ++ L+++Y K      + +
Sbjct: 376 EPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQ 435

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           LFDE+   + I++ T +  ++       A+  F+ +   G + N   F   LK     G 
Sbjct: 436 LFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGM 495

Query: 173 AELCPCVFACVYKL-GHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFS 231
            E     F+ + K+ G        + +ID     G +               +EA +F +
Sbjct: 496 VEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKL---------------KEAEDFIN 540

Query: 232 QMRAVGFKPNNFTFAFVLKAC 252
            M    F+PN F +   L AC
Sbjct: 541 NMP---FEPNVFGWCSFLGAC 558


>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330-like [Cucumis
           sativus]
          Length = 712

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 235/624 (37%), Positives = 365/624 (58%), Gaps = 43/624 (6%)

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           ++L  F  M A G  P++  F  VLK+C  L  + + +S HG  ++   + DLY   AL+
Sbjct: 89  QSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALM 148

Query: 285 DLYTK-------------SGEI-------------------SNARRIFEEMPKKDVIPWS 312
           ++Y+K             +GE+                    + R+IFE MP+KD++ W+
Sbjct: 149 NMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWN 208

Query: 313 FMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV 372
            +IA  A+  L  + + +   M  A + P+ FT  SVL   A    +  G +IH   +R 
Sbjct: 209 TIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQ 268

Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMF 432
           GL +D++V+++L+D+YAKC R+ +S  +F    +R+ ++WN++I G VQ G   + +  F
Sbjct: 269 GLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFF 328

Query: 433 SKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKC 492
            +ML  ++     ++SS++ ACA L  L  G Q+H    +  +D ++ +A++L+DMYAKC
Sbjct: 329 RQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKC 388

Query: 493 GSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL 552
           G+I  A+ +FD M   + VSW AMI G ++HG + + +++F+ M+  G +PN++ F+ VL
Sbjct: 389 GNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVL 448

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
           +ACS+GGL+++   YF SM  ++GI P +EHY ++  LLGRAG L++A   I G+   P+
Sbjct: 449 TACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPT 508

Query: 613 VMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS---- 668
             IW  LL AC +H N+++    A  IL+ +P +   ++LL+NIY+ AR W++AA     
Sbjct: 509 GSIWATLLSACRVHXNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRAS 568

Query: 669 -------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAV 721
                  K P  SWIE +  V+ F AGD SH     IR  +E L     K GY+PD S V
Sbjct: 569 MRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSEV 628

Query: 722 LRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQR 781
             DV E++K+  +  HSE+LA+ F +   P    IR+ KNLR+C DCHTA K ISKIV R
Sbjct: 629 HHDVEEEQKKYLVCSHSERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIVGR 688

Query: 782 EIIIRDVHRFHHFQDGCCSCGDFW 805
           EI++RD  RFHHF++G CSCGD+W
Sbjct: 689 EIVVRDNSRFHHFKNGTCSCGDYW 712



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/429 (25%), Positives = 202/429 (47%), Gaps = 49/429 (11%)

Query: 75  AMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTV 134
           A  +H QVLK      L   ++LL++Y  +N L D+ +LF+ +     +++ + I+ YT 
Sbjct: 25  AQQLHAQVLKF-QASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTS 83

Query: 135 SSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFV 194
                +++G F  +   G   +   F + LK    +    L   +   + ++G D + + 
Sbjct: 84  HGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYT 143

Query: 195 GTALIDAFSVCGCVEFA--------------------------------RKVFDGL---- 218
           G AL++ +S    +E +                                RK+F+ +    
Sbjct: 144 GNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKD 203

Query: 219 ------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHG 266
                        N  +EE L    +M     KP++FT + VL        I   K  HG
Sbjct: 204 LVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHG 263

Query: 267 CALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSID 326
           C+++   + D+YVA +L+D+Y K   ++++ R+F  + ++D I W+ +IA   Q  L  +
Sbjct: 264 CSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDE 323

Query: 327 AVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMD 386
            +  F +M  A + P  ++F S++ ACA +  L LG Q+H  + R G   ++F++++L+D
Sbjct: 324 GLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVD 383

Query: 387 VYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVT 446
           +YAKCG +  + ++F     R+ V+W  MI+G    G+   A+ +F +M  E +    V 
Sbjct: 384 MYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVA 443

Query: 447 YSSVLRACA 455
           + +VL AC+
Sbjct: 444 FMAVLTACS 452



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 99/375 (26%), Positives = 183/375 (48%), Gaps = 34/375 (9%)

Query: 286 LYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFT 345
           +Y+    + ++ R+F  +     + W  +I  Y    L   ++  F  M  + + P+   
Sbjct: 49  IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAK------CGRM----- 394
           F SVL++CA +  L+LG  +H  ++RVGL  D++  NALM++Y+K       GR      
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168

Query: 395 --------------------ENSV-ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
                               E+SV ++F   P+++ V+WNT+I G  + G   + + M  
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228

Query: 434 KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCG 493
           +M    +     T SSVL   A    +  G ++H  +++   D D+ VA++LIDMYAKC 
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288

Query: 494 SITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLS 553
            + D+  VF ++ + + +SWN++I+G   +GL  E L+ F  M     +P + +F  ++ 
Sbjct: 289 RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMP 348

Query: 554 ACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSV 613
           AC++   L  G+     +  N G +  I   +S+V +  + G++  A ++ + +  +  V
Sbjct: 349 ACAHLTTLHLGKQLHGYITRN-GFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMV 407

Query: 614 MIWRALLGACIIHNN 628
             W A++  C +H  
Sbjct: 408 S-WTAMIMGCALHGQ 421



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 97/392 (24%), Positives = 182/392 (46%), Gaps = 49/392 (12%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDA-------- 110
           + + L+SC    DL    ++H  +++ G   DL+  N L+N+Y KL  L ++        
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168

Query: 111 ------------------------TKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFS 146
                                    K+F+ MPE++ +S+ T I G   +  + E + +  
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228

Query: 147 TLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCG 206
            +     + + F  ++ L ++           +  C  + G D++ +V ++LID ++ C 
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288

Query: 207 CVEFARKVF------DGLF----------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLK 250
            V  + +VF      DG+           N  F+E L FF QM     KP +++F+ ++ 
Sbjct: 289 RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMP 348

Query: 251 ACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIP 310
           AC  L T+ + K  HG   +  ++ ++++A +L+D+Y K G I  A++IF+ M  +D++ 
Sbjct: 349 ACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVS 408

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLV 369
           W+ MI   A    + DA+ELF +M    + PN   F++VL AC+    +D      +S+ 
Sbjct: 409 WTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMT 468

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
              G+   V    A+ D+  + GR+E + +  
Sbjct: 469 RDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFI 500



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 100/214 (46%), Gaps = 16/214 (7%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +S + ++ L    +N D+     IH   +++G   D++  + L+++Y K  R+ D+ ++F
Sbjct: 238 DSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVF 297

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             + ER+ IS+ + I G   +  F E +  F  +     +   ++F++ +     +    
Sbjct: 298 TLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLH 357

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------- 218
           L   +   + + G D N F+ ++L+D ++ CG +  A+++FD +                
Sbjct: 358 LGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCA 417

Query: 219 FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKAC 252
            +    +A+  F QM   G KPN+  F  VL AC
Sbjct: 418 LHGQAPDAIELFEQMETEGIKPNHVAFMAVLTAC 451


>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
          Length = 957

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 260/772 (33%), Positives = 425/772 (55%), Gaps = 30/772 (3%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPER-N 121
           L++C    D +    +H   +K+G    +F  N ++ +Y K N L  A +LFD MPE+ +
Sbjct: 187 LKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKED 246

Query: 122 TISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFA 181
            +S+ + I  Y+ + Q +EA+ LF  + +     N + F A L+      + +    + A
Sbjct: 247 VVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHA 306

Query: 182 CVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEE 225
            V K  +  N FV  ALI  ++  G +  A  +F  +                 N  + E
Sbjct: 307 TVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHE 366

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           AL F+ +MR  G KP+      ++ A             H  A+K   + DL V  +L+D
Sbjct: 367 ALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVD 426

Query: 286 LYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFT 345
           +Y K   +     IF++MP KDV+ W+ +IA +AQ      A+ELF  ++   +  +   
Sbjct: 427 MYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMM 486

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
             S+L AC+ ++ +    +IHS ++R GL SD+ + N ++DVY +CG ++ +  +F    
Sbjct: 487 ISSILLACSGLKLISSVKEIHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIE 545

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
            ++ V+W +MI  YV  G   +A+ +F  M E  V    ++  S+L A ASL+AL+ G +
Sbjct: 546 FKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKE 605

Query: 466 VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGL 525
           +H   ++  + ++  +A+ L+DMYA+CG++  +R VF+ + + + V W +MI+ Y MHG 
Sbjct: 606 IHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGC 665

Query: 526 SAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYT 585
               + +F  M+     P+++ FV VL ACS+ GL+ +G  + +SM   Y +EP  EHY 
Sbjct: 666 GRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYA 725

Query: 586 SMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPE 645
            +V LLGRA HL++A + ++G+  +P+  +W ALLGAC IH+N E+G ++AQ +L+ +PE
Sbjct: 726 CLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPE 785

Query: 646 DEATHVLLSNIYAMARSWE---------KAAS--KEPGLSWIENQGMVHYFRAGDTSHAD 694
           +   +VL+SN+Y+  R W+         KA+   K PG SWIE    VH F A D SH  
Sbjct: 786 NPGNYVLVSNVYSAERRWKDVEXVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQ 845

Query: 695 MNIIRGMLEWLNMK-SRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPS 753
              I   L  +  K +++ GY+     VL + +E+EK + L+ HSE+LA+A+ +   P  
Sbjct: 846 SYEIYSKLSQITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEG 905

Query: 754 SPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           + +RI KNLR+C DCH   K+ISK  +RE+++RD +RFHHF+ G CSCGD W
Sbjct: 906 ASLRITKNLRVCGDCHNFCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 957



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 159/604 (26%), Positives = 301/604 (49%), Gaps = 27/604 (4%)

Query: 42  STTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLD-LFATNVLLNV 100
           +  +P  FS+ E    +Y++ L+ C     L     +H  ++      + +F +  L+ +
Sbjct: 68  ANQSPSQFSLDE----AYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFM 123

Query: 101 YVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAF 160
           Y K   L DA KLFD MP +   ++   I  Y  + + + ++ L+  +   G  L+   F
Sbjct: 124 YGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTF 183

Query: 161 TAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-- 218
              LK    +        V     K G+ S  FV  +++  ++ C  +  AR++FD +  
Sbjct: 184 PCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPE 243

Query: 219 ---------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKS 263
                           N    EAL  F +M+     PN +TF   L+AC     I+    
Sbjct: 244 KEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMF 303

Query: 264 AHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDL 323
            H   LK+ Y ++++VA AL+ +Y + G++  A  IF  M   D I W+ M++ + Q  L
Sbjct: 304 IHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGL 363

Query: 324 SIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNA 383
             +A++ +  MR A   P+    +S++ A A       G QIH+  ++ GL SD+ V N+
Sbjct: 364 YHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNS 423

Query: 384 LMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPAT 443
           L+D+YAK   M+    +F + P ++ V+W T+I G+ Q G   +A+ +F ++  E +   
Sbjct: 424 LVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLD 483

Query: 444 EVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFD 503
            +  SS+L AC+ L  +    ++H   ++     D+V+ N ++D+Y +CG++  A  +F+
Sbjct: 484 VMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQNGIVDVYGECGNVDYAARMFE 542

Query: 504 MMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQ 563
           ++   + VSW +MIS Y  +GL+ E L++F LM++ G  P++++ V +LSA ++   L++
Sbjct: 543 LIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKK 602

Query: 564 GEAYFKSMV-ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           G+     ++   + +E  +   +++V +  R G L+K+  +   I     +++W +++ A
Sbjct: 603 GKEIHGFLIRKGFVLEGSLA--STLVDMYARCGTLEKSRNVFNFIR-NKDLVLWTSMINA 659

Query: 623 CIIH 626
             +H
Sbjct: 660 YGMH 663



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 191/345 (55%), Gaps = 3/345 (0%)

Query: 217 GLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
           G  N+ F+   + F+      F  +   ++ VL+ C     +   +  H   + +    +
Sbjct: 54  GSVNEAFQSLTDLFANQSPSQFSLDE-AYSSVLELCGSKKALSEGQQVHAHMITSNALFN 112

Query: 277 -LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
            ++++  L+ +Y K G + +A ++F+ MP K +  W+ MI  Y      + ++EL+  MR
Sbjct: 113 SVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMR 172

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
            + +  +  TF  +L+AC  ++    G ++H L ++ G +S VFV+N+++ +Y KC  + 
Sbjct: 173 VSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLN 232

Query: 396 NSVELFAESP-KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
            + +LF   P K + V+WN+MI  Y   G+  +A+ +F +M +  +     T+ + L+AC
Sbjct: 233 GARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQAC 292

Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
              + ++ GM +H   +K++Y ++V VANALI MYA+ G + +A  +F  M+DW+ +SWN
Sbjct: 293 EDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWN 352

Query: 515 AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGG 559
           +M+SG+  +GL  E L+ +  M+  G +P+ +  + +++A +  G
Sbjct: 353 SMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSG 397



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/488 (24%), Positives = 235/488 (48%), Gaps = 21/488 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N++++  +LQ+C  +  ++  M IH  VLK    +++F  N L+ +Y +  ++ +A  +F
Sbjct: 281 NTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIF 340

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             M + +TIS+ + + G+  +  + EA+  +  +   G + +  A  + +      G   
Sbjct: 341 YNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTL 400

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------- 218
               + A   K G DS+  VG +L+D ++    +++   +FD +                
Sbjct: 401 HGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHA 460

Query: 219 FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            N     AL  F +++  G   +    + +L AC GL  I   K  H   ++     DL 
Sbjct: 461 QNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLV 519

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           +   ++D+Y + G +  A R+FE +  KDV+ W+ MI+ Y    L+ +A+ELF  M++  
Sbjct: 520 LQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETG 579

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           V P+  + VS+L A A++  L  G +IH  ++R G + +  +++ L+D+YA+CG +E S 
Sbjct: 580 VEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSR 639

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            +F     ++ V W +MI  Y   G    A+ +F +M +E +    + + +VL AC+   
Sbjct: 640 NVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSG 699

Query: 459 ALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNA 515
            +  G +    ++K  Y ++    +   L+D+  +   + +A + V  M  +     W A
Sbjct: 700 LMNEGRRF-LESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCA 758

Query: 516 MISGYSMH 523
           ++    +H
Sbjct: 759 LLGACQIH 766



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/330 (30%), Positives = 173/330 (52%), Gaps = 11/330 (3%)

Query: 340 APNQFT----FVSVLQACATMEGLDLGNQIHS-LVVRVGLLSDVFVSNALMDVYAKCGRM 394
           +P+QF+    + SVL+ C + + L  G Q+H+ ++    L + VF+S  L+ +Y KCG +
Sbjct: 71  SPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCL 130

Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
            ++ +LF   P +   TWN MI  YV  GE   ++ ++ +M    +P    T+  +L+AC
Sbjct: 131 VDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKAC 190

Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE-VSW 513
             L     G +VH L +K  Y   V VAN+++ MY KC  +  AR +FD M +  + VSW
Sbjct: 191 GLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSW 250

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV- 572
           N+MIS YS +G S E L++F  MQ+    PN  TFV  L AC +   ++QG     +++ 
Sbjct: 251 NSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLK 310

Query: 573 ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIG 632
           ++Y I   + +  +++++  R G + +AA +   +    ++  W ++L    + N +   
Sbjct: 311 SSYYINVFVAN--ALIAMYARFGKMGEAANIFYNMDDWDTIS-WNSMLSG-FVQNGLYHE 366

Query: 633 RLSAQHILDFEPEDEATHVLLSNIYAMARS 662
            L   H +    +      ++S I A ARS
Sbjct: 367 ALQFYHEMRDAGQKPDLVAVISIIAASARS 396


>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
 gi|219885099|gb|ACL52924.1| unknown [Zea mays]
          Length = 530

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 220/531 (41%), Positives = 335/531 (63%), Gaps = 12/531 (2%)

Query: 286 LYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFT 345
           +Y K G +S+AR +F++MP +DV+ W+++IA YAQ  +  +A+ L   M +A   PN FT
Sbjct: 1   MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           F S+L+A     G  +G Q+H+L V+     DV+V +AL+D+YA+C +M+ ++ +F    
Sbjct: 61  FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
            +N V+WN +I G+ +  +    ++ F++M      AT  TYSS+  A A + ALE G  
Sbjct: 121 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 180

Query: 466 VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGL 525
           VH   +K+   +   V N ++ MYAK GS+ DAR VFD M+  + V+WN M++  + +GL
Sbjct: 181 VHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGL 240

Query: 526 SAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYT 585
             E +  F+ +++ G + N +TF+ VL+ACS+GGL+++G+ YF  M+ +Y ++P I+HY 
Sbjct: 241 GKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYF-DMMKDYNVQPEIDHYV 299

Query: 586 SMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPE 645
           S V LLGRAG L +A   +  +P +P+  +W ALLGAC +H N ++G+ +A H+ + +P+
Sbjct: 300 SFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPD 359

Query: 646 DEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHAD 694
           D    VLL NIYA    W  AA            KEP  SW++ +  VH F A D +H  
Sbjct: 360 DTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPK 419

Query: 695 MNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSS 754
              I  M E +NM+ +KAGY+P+ + VL  + E E+E  L  HSEK+ALAFAL  MP  +
Sbjct: 420 SGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGA 479

Query: 755 PIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            IRI+KN+RIC DCH+A K +SK+ +REI++RD +RFHHF +G CSCGD+W
Sbjct: 480 SIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 530



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 158/336 (47%), Gaps = 17/336 (5%)

Query: 205 CGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFV 248
           CG V  AR VFD +                 N    EA+     M    F+PN FTF  +
Sbjct: 5   CGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSL 64

Query: 249 LKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDV 308
           LKA        + +  H  A+K  ++ D+YV  ALLD+Y +  ++  A  +F+ +  K+ 
Sbjct: 65  LKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNE 124

Query: 309 IPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSL 368
           + W+ +IA +A+       +  F  M++       FT+ S+  A A +  L+ G  +H+ 
Sbjct: 125 VSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAH 184

Query: 369 VVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKA 428
           +++ G     FV N ++ +YAK G M ++ ++F    KR+ VTWNTM+    Q G   +A
Sbjct: 185 LIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEA 244

Query: 429 MIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDM 488
           +  F ++ +  +   ++T+ SVL AC+    ++ G     +    N   ++    + +D+
Sbjct: 245 VAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVDL 304

Query: 489 YAKCGSITDARL-VFDMMNDWNEVSWNAMISGYSMH 523
             + G + +A + VF M  +     W A++    MH
Sbjct: 305 LGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMH 340



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 155/322 (48%), Gaps = 16/322 (4%)

Query: 100 VYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFA 159
           +Y K   + DA  +FD+MP R+ +S+   I GY  +    EA+GL   + R     N F 
Sbjct: 1   MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60

Query: 160 FTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF 219
           FT+ LK   + G   +   + A   K   D + +VG+AL+D ++ C  ++ A  VFD L 
Sbjct: 61  FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120

Query: 220 NDC----------------FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKS 263
           +                   E  L  F++M+  GF   +FT++ +  A   +  +   + 
Sbjct: 121 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 180

Query: 264 AHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDL 323
            H   +K+  ++  +V   +L +Y KSG + +AR++F+ M K+D++ W+ M+   AQ  L
Sbjct: 181 VHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGL 240

Query: 324 SIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNA 383
             +AV  F  +R+  +  NQ TF+SVL AC+    +  G     ++    +  ++    +
Sbjct: 241 GKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVS 300

Query: 384 LMDVYAKCGRMENSVELFAESP 405
            +D+  + G ++ ++    + P
Sbjct: 301 FVDLLGRAGLLKEALIFVFKMP 322



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 107/247 (43%), Gaps = 24/247 (9%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           +H   +K     D++  + LL++Y +  ++  A  +FD +  +N +S+   I G+   + 
Sbjct: 80  MHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKAD 139

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
               +  F+ + R G     F +++       +G  E    V A + K G    AFVG  
Sbjct: 140 GETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNT 199

Query: 198 LIDAFSVCGCVEFARKVFDGL-------FNDCF---------EEALNFFSQMRAVGFKPN 241
           ++  ++  G +  ARKVFD +       +N            +EA+  F ++R  G + N
Sbjct: 200 MLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLN 259

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCY----EMDLYVAVALLDLYTKSGEISNAR 297
             TF  VL AC     ++  K  H   +   Y    E+D Y  V+ +DL  ++G +  A 
Sbjct: 260 QITFLSVLTACSHGGLVKEGK--HYFDMMKDYNVQPEIDHY--VSFVDLLGRAGLLKEAL 315

Query: 298 RIFEEMP 304
               +MP
Sbjct: 316 IFVFKMP 322



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 3/143 (2%)

Query: 22  NAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQ 81
           NA + G + +A   T     +      F  + F   +Y++   +  +   L+    +H  
Sbjct: 128 NALIAGFARKADGETTLMKFAEMQRNGFGATHF---TYSSMFSAFARIGALEQGRWVHAH 184

Query: 82  VLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEA 141
           ++K G  L  F  N +L +Y K   + DA K+FD M +R+ +++ T +          EA
Sbjct: 185 LIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEA 244

Query: 142 VGLFSTLHREGHELNPFAFTAFL 164
           V  F  + + G +LN   F + L
Sbjct: 245 VAHFEEIRKCGIQLNQITFLSVL 267


>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
          Length = 1058

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 272/763 (35%), Positives = 426/763 (55%), Gaps = 44/763 (5%)

Query: 82   VLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEA 141
            VLK G   DL+  + L++ + +     +A  +F  + ++N ++    I G        EA
Sbjct: 301  VLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEA 360

Query: 142  VGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGH-------DSNAFV 194
            V +F    R   ++N   +   L  L     +E    +   V+  GH       D    V
Sbjct: 361  VKIFVGT-RNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVH--GHMLRTGLTDLKIAV 417

Query: 195  GTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRAVGF 238
               L++ ++ CG +E A K+F  +                 N   EEA+  +S MR    
Sbjct: 418  SNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCI 477

Query: 239  KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
             P+NF     L +C GL  +   +  H  A+K   ++D  V+  L+ +Y + G +S+  +
Sbjct: 478  SPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWK 537

Query: 299  IFEEMPKKDVIPWSFMIARYAQTDLSI-DAVELFCRMRQAFVAPNQFTFVSVLQACATME 357
            +F  M + D + W+ M+   A +   I + V++F  M +  + PN+ TF+++L A + + 
Sbjct: 538  VFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLS 597

Query: 358  GLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE-SPKRNHVTWNTMI 416
             L+LG Q+H+ V++ G++ D  V NAL+  YAK G M +   LF   S +R+ ++WN+MI
Sbjct: 598  VLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMI 657

Query: 417  VGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD 476
             GY+  G + +AM     M+         T+S +L ACAS+AALE GM++H   ++++ +
Sbjct: 658  SGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLE 717

Query: 477  MDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLM 536
             DVVV +AL+DMY+KCG +  A  +F+ M   NE SWN+MISGY+ HGL  + +++F+ M
Sbjct: 718  SDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEM 777

Query: 537  QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGH 596
             +    P+++TFV VLSACS+ GL+E+G  YF+ M+ ++GI P IEHY+ ++ LLGRAG 
Sbjct: 778  LRSRESPDHVTFVSVLSACSHAGLVERGLEYFE-MMPDHGILPQIEHYSCVIDLLGRAGK 836

Query: 597  LDKAAKLIEGIPFQPSVMIWRALLGACIIH---NNVEIGRLSAQHILDFEPEDEATHVLL 653
            +DK  + I+ +P +P+ +IWR +L AC      +N+++GR +++ +L+ EP++   +VL 
Sbjct: 837  IDKIKEYIQRMPIEPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEIEPQNPVNYVLA 896

Query: 654  SNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGML 702
            SN +A    WE  A            KE G SW+     VH F AGD SH +   I   L
Sbjct: 897  SNFHAATGMWEDTAKARTAMRQATEKKEAGRSWVTLNDGVHTFIAGDRSHPNTKEIYEKL 956

Query: 703  EWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNL 762
             +L    R AGY+P     L D+ E+ KE  L  HSEKLA+AF L +   S PIRI+KNL
Sbjct: 957  NFLIQNIRNAGYVPLTEYALYDLEEENKEELLSYHSEKLAIAFVLTR-SSSGPIRIMKNL 1015

Query: 763  RICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            R+C DCH A + IS+++ R+II+RD  RFHHF+DG CSCGD+W
Sbjct: 1016 RVCGDCHIAFRYISQMISRQIILRDSIRFHHFKDGKCSCGDYW 1058



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 174/603 (28%), Positives = 288/603 (47%), Gaps = 48/603 (7%)

Query: 68  QNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVT 127
           +  D  +   +H +++K+G   DLF  N L+N Y K  RL  A+++FDEMPERN +S+  
Sbjct: 73  RGGDANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTC 132

Query: 128 TIQGYTVSSQFVEAVGLFSTLHRE---GHELNPFAFTAFLKVLVSMGWAEL--CPCVFAC 182
            + GY +     EA  +F  + RE   G     F F   L+     G   L     V   
Sbjct: 133 LVSGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGL 192

Query: 183 VYKLGHDSNAFVGTALIDAFSVC--GCVEFARKVFDGL-FNDCFE--------------- 224
           V K  + SN  V  ALI  +  C  G    A++VFDG    D                  
Sbjct: 193 VSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVA 252

Query: 225 EALNFFSQMR----AVGFKPNNFTFAFVLKACLG-------LDTIRVAKSAHGCALKTCY 273
                F  M+     +  +P   TF  ++ A          LD + V     GC+     
Sbjct: 253 STFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCS----- 307

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
             DLYV  AL+  + + G    A+ IF  + +K+ +  + +I    + D S +AV++F  
Sbjct: 308 -SDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVG 366

Query: 334 MRQAFVAPNQFTFVSVLQACA----TMEGLDLGNQIHSLVVRVGLLS-DVFVSNALMDVY 388
            R   V  N  T+V +L A A    + EGL +G  +H  ++R GL    + VSN L+++Y
Sbjct: 367 TRNT-VDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMY 425

Query: 389 AKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYS 448
           AKCG +E++ ++F      + ++WNT+I    Q G   +A++ +S M +  +  +     
Sbjct: 426 AKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALI 485

Query: 449 SVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDW 508
           S L +CA L  L  G QVHC  VK   D+D  V+N L+ MY +CG+++D   VF+ M + 
Sbjct: 486 SSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEH 545

Query: 509 NEVSWNAMISGY-SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAY 567
           +EVSWN M+    S     +E++KVF+ M + G  PN +TF+ +L+A S   +LE G+  
Sbjct: 546 DEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQV 605

Query: 568 FKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
             +++ +  +E  +    +++S   ++G +     L   +  +   + W +++   I + 
Sbjct: 606 HAAVMKHGVMEDNVVD-NALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNG 664

Query: 628 NVE 630
           N++
Sbjct: 665 NLQ 667



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 171/604 (28%), Positives = 288/604 (47%), Gaps = 37/604 (6%)

Query: 56  SHSYATSLQSCIQN--DDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD--AT 111
           S ++ T L++C     D L  A+ +H  V K     +    N L+++Y      P   A 
Sbjct: 165 SFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCNALISMYGSCTVGPPILAQ 224

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGH--ELNPFAFT---AFLKV 166
           ++FD  P R+ I++   +  Y           LF  + R     +L P   T        
Sbjct: 225 RVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSLITAA 284

Query: 167 LVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF----------- 215
            +S G + +   V   V K G  S+ +VG+AL+ AF+  G  + A+ +F           
Sbjct: 285 SLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTL 344

Query: 216 DGLF-----NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKA----CLGLDTIRVAKSAHG 266
           +GL       D  EEA+  F   R      N  T+  +L A     +  + +R+ +  HG
Sbjct: 345 NGLIVGLVRQDFSEEAVKIFVGTRNT-VDVNADTYVVLLSALAEYSISEEGLRIGRVVHG 403

Query: 267 CALKTCYEMDLYVAVA--LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLS 324
             L+T    DL +AV+  L+++Y K G I +A +IF+ M   D I W+ +I+   Q    
Sbjct: 404 HMLRTGL-TDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNC 462

Query: 325 IDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNAL 384
            +AV  +  MRQ+ ++P+ F  +S L +CA ++ L  G Q+H   V+ GL  D  VSN L
Sbjct: 463 EEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVL 522

Query: 385 MDVYAKCGRMENSVELFAESPKRNHVTWNTMI-VGYVQLGEVGKAMIMFSKMLEEQVPAT 443
           + +Y +CG M +  ++F    + + V+WNTM+ V       + + + +F+ M+   +   
Sbjct: 523 VKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPN 582

Query: 444 EVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFD 503
           +VT+ ++L A + L+ LE G QVH   +K     D VV NALI  YAK G +     +F 
Sbjct: 583 KVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFT 642

Query: 504 MMNDWNE-VSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLE 562
            M+D  + +SWN+MISGY  +G   E +    LM   G   +  TF  +L+AC++   LE
Sbjct: 643 NMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALE 702

Query: 563 QGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           +G       + ++ +E  +   +++V +  + G +D A+KL   +  Q +   W +++  
Sbjct: 703 RGMELHAFGIRSH-LESDVVVESALVDMYSKCGRVDYASKLFNSMT-QRNEFSWNSMISG 760

Query: 623 CIIH 626
              H
Sbjct: 761 YARH 764



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 189/412 (45%), Gaps = 29/412 (7%)

Query: 61  TSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPER 120
           +SL SC     L     +HC  +K G  LD   +NVL+ +Y +   + D  K+F+ M E 
Sbjct: 486 SSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEH 545

Query: 121 NTISFVTTIQGYTVSSQ--FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
           + +S+  T+ G   SSQ    E V +F+ + R G   N   F   L  L  +   EL   
Sbjct: 546 DEVSW-NTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQ 604

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-----------------FND 221
           V A V K G   +  V  ALI  ++  G +     +F  +                 +N 
Sbjct: 605 VHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNG 664

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
             +EA++    M   G   +  TF+ +L AC  +  +      H   +++  E D+ V  
Sbjct: 665 NLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLESDVVVES 724

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           AL+D+Y+K G +  A ++F  M +++   W+ MI+ YA+  L   A+E+F  M ++  +P
Sbjct: 725 ALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESP 784

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           +  TFVSVL AC+    ++ G +   ++   G+L  +   + ++D+  + G+++   E  
Sbjct: 785 DHVTFVSVLSACSHAGLVERGLEYFEMMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEYI 844

Query: 402 AESP-KRNHVTWNTMIVGYVQLG-----EVGKAMIMFSKMLEEQVPATEVTY 447
              P + N + W T++V   Q       ++G+     S++L E  P   V Y
Sbjct: 845 QRMPIEPNALIWRTVLVACRQSKDGSNIDLGREA---SRVLLEIEPQNPVNY 893



 Score = 46.2 bits (108), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 28/117 (23%), Positives = 53/117 (45%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +++  L +C     L+  M +H   ++     D+   + L+++Y K  R+  A+KLF+ M
Sbjct: 687 TFSIILNACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSM 746

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
            +RN  S+ + I GY       +A+ +F  + R     +   F + L      G  E
Sbjct: 747 TQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLVE 803


>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 736

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 256/627 (40%), Positives = 356/627 (56%), Gaps = 48/627 (7%)

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           +L+ FSQM   G  PN+ TF  + K+C        AK  H  ALK    +  +V  +L+ 
Sbjct: 111 SLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIH 170

Query: 286 LYTKSGE-------------------------------ISNARRIFEEMPKKDVIPWSFM 314
           +Y++ GE                               + +ARR+F+E+P KDV+ W+ M
Sbjct: 171 MYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAM 230

Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL 374
           IA Y Q+    +A+  F RM++A V+PNQ T VSVL AC  +  L+LG  I S V   G 
Sbjct: 231 IAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGF 290

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
             ++ + NAL+D+Y+KCG +  + +LF     ++ + WNTMI GY  L    +A+++F  
Sbjct: 291 GKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEV 350

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK-----ANYDMDVVVANALIDMY 489
           ML E V   +VT+ +VL ACASL AL+ G  VH    K      N + +V +  ++I MY
Sbjct: 351 MLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVN-NVSLWTSIIVMY 409

Query: 490 AKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFV 549
           AKCG +  A  VF  M   +  SWNAMISG +M+G +   L +F+ M   G++P+++TFV
Sbjct: 410 AKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFV 469

Query: 550 GVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF 609
           GVLSAC+  G +E G  YF SM  +YGI P ++HY  M+ LL R+G  D+A  L+  +  
Sbjct: 470 GVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEM 529

Query: 610 QPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW------ 663
           +P   IW +LL AC IH  VE G   A+ + + EPE+   +VLLSNIYA A  W      
Sbjct: 530 EPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKI 589

Query: 664 -----EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDL 718
                +K   K PG + IE  G+VH F  GD  H     I  ML+ ++    + G++PD 
Sbjct: 590 RTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQSENIFRMLDEVDRLLEETGFVPDT 649

Query: 719 SAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKI 778
           S VL D+ E+ KE  L  HSEKLA+AF L    P S IRI+KNLR+C +CH+A K+ISKI
Sbjct: 650 SEVLYDMDEEWKEGALTQHSEKLAIAFGLISTKPGSTIRIVKNLRVCRNCHSATKLISKI 709

Query: 779 VQREIIIRDVHRFHHFQDGCCSCGDFW 805
             REII RD +RFHHF+DG CSC D W
Sbjct: 710 FNREIIARDRNRFHHFKDGFCSCNDRW 736



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 201/444 (45%), Gaps = 72/444 (16%)

Query: 262 KSAHGCALKTCYEMDLYVAVALLDL--YTKSGEISNARRIFEEMPKK--DVIPWSFMIAR 317
           K  H   +K+     L+    L++    + S ++S A  +F  +  +  ++  W+ +I  
Sbjct: 42  KQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIRA 101

Query: 318 YAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL--- 374
           ++ T     ++ LF +M  + + PN  TF S+ ++CA  +      Q+H+  +++ L   
Sbjct: 102 HSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLH 161

Query: 375 ----------------------------LSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
                                       L D     AL+  Y   G ++++  LF E P 
Sbjct: 162 PHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPA 221

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
           ++ V+WN MI GYVQ G   +A+  F++M E  V   + T  SVL AC  L +LE G  +
Sbjct: 222 KDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWI 281

Query: 467 HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLS 526
                   +  ++ + NAL+DMY+KCG I  AR +FD M D + + WN MI GY    L 
Sbjct: 282 GSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLY 341

Query: 527 AEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE---AY---------------- 567
            E L +F++M +    PN++TF+ VL AC++ G L+ G+   AY                
Sbjct: 342 EEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSL 401

Query: 568 FKSMVANYGIEPCIE---------------HYTSMVSLLGRAGHLDKAAKLIEGI---PF 609
           + S++  Y    C+E                + +M+S L   GH ++A  L E +    F
Sbjct: 402 WTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGF 461

Query: 610 QPSVMIWRALLGACIIHNNVEIGR 633
           QP  + +  +L AC     VE+G 
Sbjct: 462 QPDDITFVGVLSACTQAGFVELGH 485



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/428 (24%), Positives = 176/428 (41%), Gaps = 58/428 (13%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLK------------------------------ 84
           NSH++ +  +SC ++     A  +H   LK                              
Sbjct: 126 NSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVF 185

Query: 85  -KGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVG 143
            K    D  +   L+  YV    + DA +LFDE+P ++ +S+   I GY  S +F EA+ 
Sbjct: 186 DKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALA 245

Query: 144 LFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFS 203
            F+ +       N     + L     +   EL   + + V   G   N  +  AL+D +S
Sbjct: 246 CFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYS 305

Query: 204 VCGCVEFARKVFDGLFN----------------DCFEEALNFFSQMRAVGFKPNNFTFAF 247
            CG +  ARK+FDG+ +                  +EEAL  F  M      PN+ TF  
Sbjct: 306 KCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLA 365

Query: 248 VLKACLGLDTIRVAKSAHGCALK----TCYEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
           VL AC  L  + + K  H    K    T    ++ +  +++ +Y K G +  A ++F  M
Sbjct: 366 VLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSM 425

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
             + +  W+ MI+  A    +  A+ LF  M      P+  TFV VL AC     ++LG+
Sbjct: 426 GSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGH 485

Query: 364 QIHSLVVR-VGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTM-----I 416
           +  S + +  G+   +     ++D+ A+ G+ + +  L      + +   W ++     I
Sbjct: 486 RYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRI 545

Query: 417 VGYVQLGE 424
            G V+ GE
Sbjct: 546 HGQVEFGE 553


>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
          Length = 693

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 258/678 (38%), Positives = 376/678 (55%), Gaps = 35/678 (5%)

Query: 160 FTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--- 216
           FTA LK+  +         V A +   G  S +   TAL + +  C     AR+VFD   
Sbjct: 19  FTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRMP 78

Query: 217 -----------------GLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIR 259
                            GL +   E  +    Q    G +P++ T   VL AC     + 
Sbjct: 79  SRDRVAWNAVVAGYARNGLPSSAMEAVVRM--QGEEGGERPDSVTLVSVLPACADARALH 136

Query: 260 VAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYA 319
             +  H  AL+   +  + V+ A+LD Y K G +  AR +F+ MP ++ + W+ MI  YA
Sbjct: 137 ACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYA 196

Query: 320 QTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVF 379
               + +A+ LF RM Q  V     + ++ LQAC  +  LD   ++H L+VRVGL S+V 
Sbjct: 197 DNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVS 256

Query: 380 VSNALMDVYAKCGRMENSVELFAE-SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE 438
           V+NAL+  YAKC R + + ++F E   K+  ++WN MI+G+ Q      A  +F++M  E
Sbjct: 257 VTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLE 316

Query: 439 QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDA 498
            V     T  SV+ A A ++       +H  +++   D DV V  ALIDMY+KCG ++ A
Sbjct: 317 NVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIA 376

Query: 499 RLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNG 558
           R +FD   D + ++WNAMI GY  HG     +++F+ M+  G  PN  TF+ VL+ACS+ 
Sbjct: 377 RRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHA 436

Query: 559 GLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRA 618
           GL+++G+ YF SM  +YG+EP +EHY +MV LLGRAG LD+A   I+ +P +P + ++ A
Sbjct: 437 GLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGA 496

Query: 619 LLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAA 667
           +LGAC +H NVE+   SAQ I +  PE+   HVLL+NIYA A  W           +K  
Sbjct: 497 MLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTAMEKKGL 556

Query: 668 SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVRE 727
            K PG S I+ +  VH F +G T+H     I   L  L  + +  GY+PD  ++  DV +
Sbjct: 557 QKTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKLIEEIKDMGYVPDTDSI-HDVED 615

Query: 728 DEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRD 787
           D K + L  HSEKLA+A+ L +  P + I+I KNLR+C DCH A K+IS +  REII+RD
Sbjct: 616 DVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLLTGREIIMRD 675

Query: 788 VHRFHHFQDGCCSCGDFW 805
           + RFHHF+DG CSCGD+W
Sbjct: 676 IQRFHHFKDGKCSCGDYW 693



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 210/463 (45%), Gaps = 24/463 (5%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           ++   L+ C    DL T   +H Q+  +G   +  A+  L N+Y K  R  DA ++FD M
Sbjct: 18  TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77

Query: 118 PERNTISFVTTIQGYT---VSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           P R+ +++   + GY    + S  +EAV         G   +     + L          
Sbjct: 78  PSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQG-EEGGERPDSVTLVSVLPACADARALH 136

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------- 218
            C  V A   + G D    V TA++DA+  CG VE AR VFD +                
Sbjct: 137 ACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYA 196

Query: 219 FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            N    EA+  F +M   G    + +    L+AC  L  +   +  H   ++     ++ 
Sbjct: 197 DNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVS 256

Query: 279 VAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
           V  AL+  Y K      A ++F E+  KK  I W+ MI  + Q +   DA  LF RM+  
Sbjct: 257 VTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLE 316

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            V P+ FT VSV+ A A +        IH   +R  L  DV+V  AL+D+Y+KCGR+  +
Sbjct: 317 NVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIA 376

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
             LF  +  R+ +TWN MI GY   G    A+ +F +M        E T+ SVL AC+  
Sbjct: 377 RRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHA 436

Query: 458 AALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA 498
             ++ G Q +  ++K +Y ++  + +   ++D+  + G + +A
Sbjct: 437 GLVDEG-QKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEA 478



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 190/410 (46%), Gaps = 25/410 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +S +  + L +C     L     +H   L+ G    +  +  +L+ Y K   +  A  +F
Sbjct: 118 DSVTLVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVF 177

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D MP RN++S+   I GY  +    EA+ LF  + +EG ++   +  A L+    +G+ +
Sbjct: 178 DCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLD 237

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
               V   + ++G  SN  V  ALI  ++ C   + A +VF+ L                
Sbjct: 238 EVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGF 297

Query: 220 --NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
             N+C E+A   F++M+    +P++FT   V+ A   +     A+  HG +++   + D+
Sbjct: 298 TQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDV 357

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
           YV  AL+D+Y+K G +S ARR+F+    + VI W+ MI  Y        AVELF  M+  
Sbjct: 358 YVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGT 417

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQ-IHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
              PN+ TF+SVL AC+    +D G +   S+    GL   +     ++D+  + G+++ 
Sbjct: 418 GSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDE 477

Query: 397 SVELFAESPKRNHVTWNTMIVGY------VQLGEVGKAMIMFSKMLEEQV 440
           +       P    ++    ++G       V+L E   A I+F    EE V
Sbjct: 478 AWSFIKNMPIEPGISVYGAMLGACKLHKNVELAE-ESAQIIFELGPEEGV 526



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 141/283 (49%), Gaps = 3/283 (1%)

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
            P   TF ++L+ CA    L  G  +H+ +   GL S+   S AL ++Y KC R  ++  
Sbjct: 13  GPVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARR 72

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ--VPATEVTYSSVLRACASL 457
           +F   P R+ V WN ++ GY + G    AM    +M  E+       VT  SVL ACA  
Sbjct: 73  VFDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADA 132

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
            AL    +VH   ++A  D  V V+ A++D Y KCG++  AR VFD M   N VSWNAMI
Sbjct: 133 RALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMI 192

Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
            GY+ +G + E + +F  M Q G    + + +  L AC   G L++     + +V   G+
Sbjct: 193 DGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLV-RVGL 251

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
              +    ++++   +    D AA++   +  + + + W A++
Sbjct: 252 SSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMI 294


>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 624

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 236/600 (39%), Positives = 355/600 (59%), Gaps = 13/600 (2%)

Query: 218 LFNDCFEEALNFFSQMRAVGFKPNNFTF-AFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
           L  D  +E+L F S      + P +  F   +LK C     +   +  HG  +++ +  D
Sbjct: 26  LSEDSDDESLKFPSNDLEGSYIPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHD 85

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           L +   LL++Y K G +  AR++F++MP++D + W+ +I+ Y+Q D   DA+ LF +M +
Sbjct: 86  LVMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLR 145

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
              +PN+FT  SV++A A       G+Q+H   V+ G  S+V V +AL+D+Y + G M++
Sbjct: 146 FGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDD 205

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           +  +F     RN V+WN +I G+ +     KA+ +F  ML E    +  +Y+S+  AC+S
Sbjct: 206 AQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSS 265

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
              LE G  VH   +K+   +     N L+DMYAK GSI DAR +FD +   + VSWN++
Sbjct: 266 TGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSL 325

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           ++ Y+ HG   E +  F+ M++ G RPN ++F+ VL+ACS+ GLL++G  Y++ M  + G
Sbjct: 326 LTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-G 384

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
           I     HY ++V LLGRAG L++A + IE +P +P+  IW+ALL AC +H N E+G  +A
Sbjct: 385 IVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAA 444

Query: 637 QHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYF 685
           +H+ + +P+D   HV+L NIYA    W  AA            KEP  SW+E +  +H F
Sbjct: 445 EHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMF 504

Query: 686 RAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAF 745
            A D  H     I    E +  K ++ GY+PD S V+  V + E+E  L  HSEK+ALAF
Sbjct: 505 VANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAF 564

Query: 746 ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           AL   PP S I I KN+R+C DCH+AIK+ SK V REII+RD +RFHHF+DG CSC D+W
Sbjct: 565 ALLNTPPGSTIHIKKNIRVCGDCHSAIKLASKAVGREIIVRDTNRFHHFKDGACSCKDYW 624



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 184/363 (50%), Gaps = 16/363 (4%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           Y T L+ C     L     +H  +++     DL   N LLN+Y K   L +A K+FD+MP
Sbjct: 54  YNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMP 113

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
           ER+ +++ T I GY+   +  +A+ LF+ + R G   N F  ++ +K   +         
Sbjct: 114 ERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQ 173

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL--FNDC-------------- 222
           +     K G DSN  VG+AL+D ++  G ++ A+ VFD L   ND               
Sbjct: 174 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCG 233

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
            E+AL  F  M   GF+P++F++A +  AC     +   K  H   +K+  ++  +    
Sbjct: 234 TEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 293

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           LLD+Y KSG I +AR+IF+ + K+DV+ W+ ++  YAQ     +AV  F  MR+  + PN
Sbjct: 294 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPN 353

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           + +F+SVL AC+    LD G   + L+ + G++ + +    ++D+  + G +  ++    
Sbjct: 354 EISFLSVLTACSHSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIE 413

Query: 403 ESP 405
           E P
Sbjct: 414 EMP 416



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 109/265 (41%), Gaps = 32/265 (12%)

Query: 49  FSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLP 108
           F  S F   SYA+   +C     L+    +H  ++K G  L  FA N LL++Y K   + 
Sbjct: 249 FRPSHF---SYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIH 305

Query: 109 DATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLV 168
           DA K+FD + +R+ +S+ + +  Y       EAV  F  + R G   N  +F + L    
Sbjct: 306 DARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACS 365

Query: 169 SMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALN 228
             G  +     +  + K G          +++A+     V+   +  D         AL 
Sbjct: 366 HSGLLDEGWHYYELMKKDG---------IVLEAWHYVTIVDLLGRAGD------LNRALR 410

Query: 229 FFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAH--GCALKTCYEM---DLYVAVAL 283
           F  +M     +P    +  +L AC      R+ K+      A +  +E+   D    V L
Sbjct: 411 FIEEM---PIEPTAAIWKALLNAC------RMHKNTELGAYAAEHVFELDPDDPGPHVIL 461

Query: 284 LDLYTKSGEISNARRIFEEMPKKDV 308
            ++Y   G  ++A R+ ++M +  V
Sbjct: 462 YNIYASGGRWNDAARVRKKMKESGV 486


>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g24000, mitochondrial; Flags: Precursor
 gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
          Length = 633

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 228/569 (40%), Positives = 343/569 (60%), Gaps = 12/569 (2%)

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
           +LK C     +   +  H   L++ +  D+ +   LL++Y K G +  AR++FE+MP++D
Sbjct: 66  LLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRD 125

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
            + W+ +I+ Y+Q D   DA+  F +M +   +PN+FT  SV++A A       G+Q+H 
Sbjct: 126 FVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHG 185

Query: 368 LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK 427
             V+ G  S+V V +AL+D+Y + G M+++  +F     RN V+WN +I G+ +     K
Sbjct: 186 FCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEK 245

Query: 428 AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALID 487
           A+ +F  ML +    +  +Y+S+  AC+S   LE G  VH   +K+   +     N L+D
Sbjct: 246 ALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLD 305

Query: 488 MYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLT 547
           MYAK GSI DAR +FD +   + VSWN++++ Y+ HG   E +  F+ M++ G RPN ++
Sbjct: 306 MYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEIS 365

Query: 548 FVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGI 607
           F+ VL+ACS+ GLL++G  Y++ M  + GI P   HY ++V LLGRAG L++A + IE +
Sbjct: 366 FLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEM 424

Query: 608 PFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA 667
           P +P+  IW+ALL AC +H N E+G  +A+H+ + +P+D   HV+L NIYA    W  AA
Sbjct: 425 PIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAA 484

Query: 668 -----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIP 716
                       KEP  SW+E +  +H F A D  H     I    E +  K ++ GY+P
Sbjct: 485 RVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVP 544

Query: 717 DLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIIS 776
           D S V+  V + E+E  L  HSEK+ALAFAL   PP S I I KN+R+C DCHTAIK+ S
Sbjct: 545 DTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLAS 604

Query: 777 KIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           K+V REII+RD +RFHHF+DG CSC D+W
Sbjct: 605 KVVGREIIVRDTNRFHHFKDGNCSCKDYW 633



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 184/363 (50%), Gaps = 16/363 (4%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           Y T L+ C     L     +H  +L+     D+   N LLN+Y K   L +A K+F++MP
Sbjct: 63  YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
           +R+ +++ T I GY+   +  +A+  F+ + R G+  N F  ++ +K   +         
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL--FNDC-------------- 222
           +     K G DSN  VG+AL+D ++  G ++ A+ VFD L   ND               
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
            E+AL  F  M   GF+P++F++A +  AC     +   K  H   +K+  ++  +    
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 302

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           LLD+Y KSG I +AR+IF+ + K+DV+ W+ ++  YAQ     +AV  F  MR+  + PN
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPN 362

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           + +F+SVL AC+    LD G   + L+ + G++ + +    ++D+  + G +  ++    
Sbjct: 363 EISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIE 422

Query: 403 ESP 405
           E P
Sbjct: 423 EMP 425



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 168/293 (57%), Gaps = 2/293 (0%)

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           +  +++  ++  + ++L+ C   + L  G  +H+ +++     D+ + N L+++YAKCG 
Sbjct: 51  LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           +E + ++F + P+R+ VTW T+I GY Q      A++ F++ML       E T SSV++A
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
            A+      G Q+H   VK  +D +V V +AL+D+Y + G + DA+LVFD +   N+VSW
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 230

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA 573
           NA+I+G++    + + L++F  M + G+RP++ ++  +  ACS+ G LEQG+     M+ 
Sbjct: 231 NALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK 290

Query: 574 NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH 626
           + G +       +++ +  ++G +  A K+ + +  +  V+ W +LL A   H
Sbjct: 291 S-GEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQH 341



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 107/265 (40%), Gaps = 32/265 (12%)

Query: 49  FSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLP 108
           F  S F   SYA+   +C     L+    +H  ++K G  L  FA N LL++Y K   + 
Sbjct: 258 FRPSHF---SYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIH 314

Query: 109 DATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLV 168
           DA K+FD + +R+ +S+ + +  Y       EAV  F  + R G   N  +F + L    
Sbjct: 315 DARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACS 374

Query: 169 SMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALN 228
             G  +     +  + K G    A+    ++D     G +                 AL 
Sbjct: 375 HSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDL---------------NRALR 419

Query: 229 FFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAH--GCALKTCYEM---DLYVAVAL 283
           F  +M     +P    +  +L AC      R+ K+      A +  +E+   D    V L
Sbjct: 420 FIEEM---PIEPTAAIWKALLNAC------RMHKNTELGAYAAEHVFELDPDDPGPHVIL 470

Query: 284 LDLYTKSGEISNARRIFEEMPKKDV 308
            ++Y   G  ++A R+ ++M +  V
Sbjct: 471 YNIYASGGRWNDAARVRKKMKESGV 495


>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
          Length = 720

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 255/720 (35%), Positives = 391/720 (54%), Gaps = 28/720 (3%)

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           FDE+     + +   +     S  F  ++GLF  +   G E++ + F+   K   S+   
Sbjct: 1   FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF-------------- 219
                +   + K G      VG +L+  +     V+ ARKVFD +               
Sbjct: 61  HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120

Query: 220 --NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
             N   E+ L+ F QM   G + +  T   V   C     I + ++ H   +K C+  + 
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
                LLD+Y+K G++ +A+ +F EM  + V+ ++ MIA YA+  L+ +AV+LF  M + 
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 240

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            ++P+ +T  +VL  CA    LD G ++H  +    L  D+FVSNALMD+YAKCG M+ +
Sbjct: 241 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA 300

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ-VPATEVTYSSVLRACAS 456
             +F+E   ++ ++WNT+I GY +     +A+ +F+ +LEE+     E T + VL ACAS
Sbjct: 301 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 360

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           L+A + G ++H   ++  Y  D  VAN+L+DMYAKCG++  A ++FD +   + VSW  M
Sbjct: 361 LSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVM 420

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           I+GY MHG   E + +F+ M+Q G   + ++FV +L ACS+ GL+++G  +F  M     
Sbjct: 421 IAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECK 480

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
           IEP +EHY  +V +L R G L KA + IE +P  P   IW ALL  C IH++V++    A
Sbjct: 481 IEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVA 540

Query: 637 QHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYF 685
           + + + EPE+   +VL++NIYA A  WE           +   K PG SWIE +G V+ F
Sbjct: 541 EKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIF 600

Query: 686 RAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAF 745
            AGD+S+ +   I   L  +  +  + GY P     L D  E EKE  L  HSEKLA+A 
Sbjct: 601 VAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMAL 660

Query: 746 ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            +        IR+ KNLR+C DCH   K +SK+ +REI++RD +RFH F+DG CSC  FW
Sbjct: 661 GIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 720



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 139/511 (27%), Positives = 247/511 (48%), Gaps = 33/511 (6%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E +S++++   +S      +     +H  +LK G        N L+  Y+K  R+  A K
Sbjct: 41  EMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARK 100

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFL-----KVL 167
           +FDEM ER+ IS+ + I GY  +    + + +F  +   G E++     +         L
Sbjct: 101 VFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRL 160

Query: 168 VSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF---- 223
           +S+G A     V AC  +     + F  T L+D +S CG ++ A+ VF  + +       
Sbjct: 161 ISLGRAVHSIGVKACFSR----EDRFCNT-LLDMYSKCGDLDSAKAVFREMSDRSVVSYT 215

Query: 224 ------------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT 271
                        EA+  F +M   G  P+ +T   VL  C     +   K  H    + 
Sbjct: 216 SMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEN 275

Query: 272 CYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELF 331
               D++V+ AL+D+Y K G +  A  +F EM  KD+I W+ +I  Y++   + +A+ LF
Sbjct: 276 DLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLF 335

Query: 332 -CRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAK 390
              + +   +P++ T   VL ACA++   D G +IH  ++R G  SD  V+N+L+D+YAK
Sbjct: 336 NLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAK 395

Query: 391 CGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
           CG +  +  LF +   ++ V+W  MI GY   G   +A+ +F++M +  + A E+++ S+
Sbjct: 396 CGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSL 455

Query: 451 LRACASLAALEPGMQ-VHCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDW 508
           L AC+    ++ G +  + +  +   +  V     ++DM A+ G +  A R + +M    
Sbjct: 456 LYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPP 515

Query: 509 NEVSWNAMISGYSMH---GLSAEVL-KVFDL 535
           +   W A++ G  +H    L+ +V  KVF+L
Sbjct: 516 DATIWGALLCGCRIHHDVKLAEKVAEKVFEL 546



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/328 (21%), Positives = 139/328 (42%), Gaps = 42/328 (12%)

Query: 15  LTHQSKINAWLR-GLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQ 73
           +++ S I  + R GL+ +A    ++      +P  ++V+          L  C +   L 
Sbjct: 212 VSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVT--------AVLNCCARYRLLD 263

Query: 74  TAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYT 133
               +H  + +     D+F +N L+++Y K   + +A  +F EM  ++ IS+ T I GY+
Sbjct: 264 EGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYS 323

Query: 134 VSSQFVEAVGLFSTLHREGHELNPFAFTA--FLKVLVSMGWAELCPCVFACVYKLGHDSN 191
            +    EA+ LF+ L  E    +P   T    L    S+   +    +   + + G+ S+
Sbjct: 324 KNCYANEALSLFNLLLEE-KRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSD 382

Query: 192 AFVGTALIDAFSVCGCVEFARKVFDGLFNDCF----------------EEALNFFSQMRA 235
             V  +L+D ++ CG +  A  +FD + +                   +EA+  F+QMR 
Sbjct: 383 RHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQ 442

Query: 236 VGFKPNNFTFAFVLKACL-------GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYT 288
            G + +  +F  +L AC        G     + +  H C ++   E        ++D+  
Sbjct: 443 AGIEADEISFVSLLYACSHSGLVDEGWRFFNIMR--HECKIEPTVEH----YACIVDMLA 496

Query: 289 KSGEISNARRIFEEMP-KKDVIPWSFMI 315
           ++G++  A R  E MP   D   W  ++
Sbjct: 497 RTGDLIKAYRFIENMPIPPDATIWGALL 524


>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
 gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
          Length = 795

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 265/784 (33%), Positives = 416/784 (53%), Gaps = 40/784 (5%)

Query: 52  SEFNSHS-YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDA 110
           S F+S   Y  +L+ C    DL++   IH ++    +  ++F  N ++  Y K   +  A
Sbjct: 22  SRFDSSGHYRDALRQC---QDLESVRQIHDRISGAASA-NVFLGNEIVRAYGKCGSVASA 77

Query: 111 TKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSM 170
              FD +  +N  S+ + +  Y  +  +  A+ L+    R   + NP  +T  L    S+
Sbjct: 78  RAAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYK---RMDLQPNPVVYTTVLGACASI 134

Query: 171 GWAELCPCVFACVYKL-GHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDC------- 222
              E    + + +    G   +  +  +L+  ++ CG +E A+++F+ +           
Sbjct: 135 KALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAM 194

Query: 223 ---------FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY 273
                    FEEA+  +  M     +P+  TF  VL AC  L  +   +  H        
Sbjct: 195 IAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGT 251

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
           E+DL +  ALL +Y +   + +A +IF+ +P++DV+ WS MIA +A+TDL  +A+E + +
Sbjct: 252 ELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSK 311

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           M+   V PN +TF SVL ACA++  L  G  +H  ++  G    +    AL+D+Y   G 
Sbjct: 312 MQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGS 371

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE-QVPATEVTYSSVLR 452
           ++ +  LF +   R+   W  +I GY + G     + ++ +M    +VPAT++ YS V+ 
Sbjct: 372 LDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVIS 431

Query: 453 ACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS 512
           ACASL A     Q H          D V+A +L++MY++ G++  AR VFD M+  + ++
Sbjct: 432 ACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLA 491

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
           W  +I+GY+ HG     L ++  M+  G  P+ LTF+ VL ACS+ GL EQG+  F S+ 
Sbjct: 492 WTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQ 551

Query: 573 ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIG 632
           ++Y + P I HY+ ++ LL RAG L  A +LI  +P +P+ + W +LLGA  IH +V+  
Sbjct: 552 SDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRA 611

Query: 633 RLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGM 681
             +A  I   +P D A++VLLSN++A+  +    AS           K  G SWIE    
Sbjct: 612 THAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQ 671

Query: 682 VHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKL 741
           +H F  GD SH     I   L+ L+ K ++AGY+P+   VL DV E EKE  L +HSEKL
Sbjct: 672 IHEFNVGDNSHPRFQEIFAELQRLSPKIKEAGYVPESEEVLHDVGEKEKELLLRLHSEKL 731

Query: 742 ALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSC 801
           A+AF L    P + +RI   LRIC DCH+A+K IS I +REII+RD  RFH F+DG CSC
Sbjct: 732 AIAFGLIATAPGTTLRIFNTLRICHDCHSAVKFISAIARREIIVRDSSRFHKFRDGQCSC 791

Query: 802 GDFW 805
           GD+W
Sbjct: 792 GDYW 795


>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
          Length = 746

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 263/686 (38%), Positives = 396/686 (57%), Gaps = 35/686 (5%)

Query: 153 HELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGH-DSNAFVGTALIDAFSVCGCVEFA 211
           H L P +FT    V  + G A     + AC  +LG    N F   +L+ A+   G V  A
Sbjct: 63  HPLRPDSFTFPPLVRAAPGPASAAQ-LHACALRLGLLHPNVFASGSLVHAYLRFGRVAEA 121

Query: 212 RKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGL 255
            +VFD +                 N    +A+    +M   G   +  T + VL  C+ L
Sbjct: 122 YRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVL 181

Query: 256 DTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMI 315
               +A   H  A+K     +L+V  AL+D+Y K G ++ A  +F  M  +D++ W+ +I
Sbjct: 182 GDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSII 241

Query: 316 ARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ-IHSLVVRVGL 374
           +   Q      AVELF  M ++ V P+  T VS+  A A   G +LG + +H  V R G 
Sbjct: 242 SANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQC-GDELGAKSVHCYVRRRGW 300

Query: 375 -LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
            + D+   NA++D+YAK  +++ + ++F   P R+ V+WNT+I GY+Q G   +A+ +++
Sbjct: 301 DVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYN 360

Query: 434 KML-EEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKC 492
            M   E +   + T+ SVL A + L  L+ GM++H L++K   ++DV V   LID+YAKC
Sbjct: 361 DMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKC 420

Query: 493 GSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL 552
           G + +A  +F+ M   +   WNA+I+G  +HG  A+ L +F  MQQ   +P+++TFV +L
Sbjct: 421 GKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLL 480

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
           +ACS+ GL++QG ++F  M   YGI P  +HYT MV +LGRAG LD+A + I+ +P +P 
Sbjct: 481 AACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPD 540

Query: 613 VMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS---- 668
             +W ALLGAC IH NVE+G++++Q++ + +PE+   +VL+SN+YA    W+   +    
Sbjct: 541 SAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGVDAVRSL 600

Query: 669 -------KEPGLSWIENQGMVHYFRAGDTS--HADMNIIRGMLEWLNMKSRKAGYIPDLS 719
                  K PG S +E +G V  F +G  +  H     I+  L  L  K + AGY+PD S
Sbjct: 601 VRRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQHEEIQRGLHDLLAKMKSAGYVPDYS 660

Query: 720 AVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIV 779
            VL+DV EDEKE+ L  HSE+LA+AF +   PP +P+ I KNLR+C DCH+A K ISKI 
Sbjct: 661 FVLQDVEEDEKEQILNNHSERLAIAFGIINTPPGTPLHIYKNLRVCGDCHSATKYISKIT 720

Query: 780 QREIIIRDVHRFHHFQDGCCSCGDFW 805
           +REII+RD +RFHHF+DG CSCGDFW
Sbjct: 721 EREIIVRDANRFHHFKDGHCSCGDFW 746



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 129/473 (27%), Positives = 233/473 (49%), Gaps = 23/473 (4%)

Query: 74  TAMTIHCQVLKKGNC-LDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGY 132
           +A  +H   L+ G    ++FA+  L++ Y++  R+ +A ++FDEMPER+  ++   + G 
Sbjct: 84  SAAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGL 143

Query: 133 TVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNA 192
             +++  +AV L   +  EG   +    ++ L + V +G   L   +     K G     
Sbjct: 144 CRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGEL 203

Query: 193 FVGTALIDAFSVCGCVEFARKVFDGL-------FNDCFE---------EALNFFSQMRAV 236
           FV  ALID +   G +  A  VF G+       +N              A+  F  M   
Sbjct: 204 FVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMES 263

Query: 237 GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM-DLYVAVALLDLYTKSGEISN 295
           G  P+  T   +  A         AKS H    +  +++ D+    A++D+Y K  +I  
Sbjct: 264 GVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDA 323

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR-QAFVAPNQFTFVSVLQACA 354
           A+++F+ +P +DV+ W+ +I  Y Q  L+ +A+ ++  M     + P Q TFVSVL A +
Sbjct: 324 AQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYS 383

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
            + GL  G ++H+L ++ GL  DV+V+  L+D+YAKCG++  ++ LF   P+R+   WN 
Sbjct: 384 YLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNA 443

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
           +I G    G   KA+ +FS+M +E++    VT+ S+L AC+    ++ G     L ++  
Sbjct: 444 IIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDL-MQTV 502

Query: 475 YDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHG 524
           Y +  +  +   ++DM  + G + +A   +  M    +   W A++    +HG
Sbjct: 503 YGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHG 555



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 175/393 (44%), Gaps = 25/393 (6%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           + ++ L  C+   D   A+ +H   +K G   +LF  N L++VY KL  L +A  +F  M
Sbjct: 170 TLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGM 229

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
             R+ +++ + I       +   AV LF  +   G   +     +    +   G      
Sbjct: 230 ALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAK 289

Query: 178 CVFACVYKLGHD-SNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------N 220
            V   V + G D  +   G A++D ++    ++ A+KVFD L                 N
Sbjct: 290 SVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQN 349

Query: 221 DCFEEALNFFSQMR-AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
               EA+  ++ M    G KP   TF  VL A   L  ++     H  ++KT   +D+YV
Sbjct: 350 GLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYV 409

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
              L+DLY K G++  A  +FE MP++   PW+ +IA          A+ LF +M+Q  +
Sbjct: 410 TTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEI 469

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRV-GLLSDVFVSNALMDVYAKCGRMENSV 398
            P+  TFVS+L AC+    +D G     L+  V G++        ++D+  + G+++ + 
Sbjct: 470 KPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAF 529

Query: 399 ELFAESP-KRNHVTWNTM-----IVGYVQLGEV 425
           E     P K +   W  +     I G V++G+V
Sbjct: 530 EFIQSMPIKPDSAVWGALLGACRIHGNVEMGKV 562



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 103/256 (40%), Gaps = 41/256 (16%)

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
           LQ  M +H   +K G  LD++ T  L+++Y K  +L +A  LF+ MP R+T  +   I G
Sbjct: 388 LQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAG 447

Query: 132 YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV-----LVSMGWA--ELCPCVFACVY 184
             V     +A+ LFS + +E  + +   F + L       LV  G +  +L   V+  V 
Sbjct: 448 LGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVP 507

Query: 185 KLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFT 244
              H       T ++D     G                 +EA  F   M     KP++  
Sbjct: 508 IAKHY------TCMVDMLGRAG---------------QLDEAFEFIQSMP---IKPDSAV 543

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMD---LYVAVALLDLYTKSGE---ISNARR 298
           +  +L AC     + + K     A +  +E+D   +   V + ++Y K G+   +   R 
Sbjct: 544 WGALLGACRIHGNVEMGK----VASQNLFELDPENVGYYVLMSNMYAKIGKWDGVDAVRS 599

Query: 299 IFEEMPKKDVIPWSFM 314
           +      +    WS M
Sbjct: 600 LVRRQNLQKTPGWSSM 615


>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 733

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 254/677 (37%), Positives = 380/677 (56%), Gaps = 65/677 (9%)

Query: 190 SNAFVGTALIDAFSVCGCVEFARKVFDGL-----------------FNDCFEEALNFFSQ 232
           S  F  +AL  +FS    +++AR +FD +                  +D F+  + F   
Sbjct: 61  SKLFTASAL-SSFST---LDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDL 116

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           +      PN FTF FV+KA   L   RV  + HG A+K  + MDLY+  +L+  Y   G+
Sbjct: 117 LDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGD 176

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           +S A R+F+ +  KDV+ W+ MI+ +AQ +   DA+ELF +M +  V PN  T V VL A
Sbjct: 177 LSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSA 236

Query: 353 CATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTW 412
           CA    L+ G  + S + R G+  D+ + NA++D+Y KCG ++++ +LF E P+R+  +W
Sbjct: 237 CAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSW 296

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPA------------------------------ 442
             M+ GY ++G+   A ++F+ M  +++ A                              
Sbjct: 297 TIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIA 356

Query: 443 --TEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARL 500
              EVT  S L ACA L A++ G  +H    +    ++  + ++L+DMYAKCGS+  A  
Sbjct: 357 KPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALE 416

Query: 501 VFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGL 560
           VF  + + +   W+AMI+G  MHG     + +F  MQ+   +PN++TF  VL ACS+ GL
Sbjct: 417 VFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGL 476

Query: 561 LEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
           +++G  +F  M   YG+ P ++HY  MV +LGRAG L++A +LI  +   PS  +W ALL
Sbjct: 477 VDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALL 536

Query: 621 GACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SK 669
           GAC +H NVE+G L++  +L  EP +    VLLSNIYA    WEK +            K
Sbjct: 537 GACSLHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKK 596

Query: 670 EPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDE 729
           EPG S IE  G VH F  GD +H   + I   LE +  K +  GY P+ S +L+ + ED+
Sbjct: 597 EPGCSSIEANGNVHEFLVGDNTHPLSSNIYSKLEEIATKLKSVGYEPNKSHLLQLIEEDD 656

Query: 730 -KERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDV 788
            KE+ L +HSEKLA+AF L  + PS PIR++KNLRIC DCH   K++S++  R+I++RD 
Sbjct: 657 LKEQALSLHSEKLAIAFGLVTLAPSQPIRVVKNLRICGDCHAFAKLVSRVYDRDILLRDR 716

Query: 789 HRFHHFQDGCCSCGDFW 805
           +RFHHF+DG CSC D+W
Sbjct: 717 YRFHHFRDGHCSCMDYW 733



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 129/524 (24%), Positives = 244/524 (46%), Gaps = 58/524 (11%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYV--KLNRLPDAT 111
           F +H   +++  C  +  L+    +H ++L+ G   D F+ + L         + L  A 
Sbjct: 23  FRNHQILSTIDKCSSSKQLKE---VHARMLRTGLFFDPFSASKLFTASALSSFSTLDYAR 79

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHEL-NPFAFTAFLKVLVSM 170
            LFD++P+ N  ++ T I+ Y  SS   ++  +F  L  +  +L N F F   +K    +
Sbjct: 80  NLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASEL 139

Query: 171 GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------- 219
             + +   V     KL    + ++  +L+  +  CG +  A ++F G+            
Sbjct: 140 KASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMI 199

Query: 220 -----NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
                 +C E+AL  F +M      PN+ T   VL AC     +   +       +   +
Sbjct: 200 SAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIK 259

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFM-------------------- 314
           +DL +  A+LD+YTK G + +A+++F+EMP++DV  W+ M                    
Sbjct: 260 VDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAM 319

Query: 315 -----------IARYAQTDLSIDAVELFCRMRQAFVA-PNQFTFVSVLQACATMEGLDLG 362
                      I+ Y Q     +A+ +F  ++ + +A P++ T VS L ACA +  +DLG
Sbjct: 320 PVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLG 379

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
             IH  + R G++ +  + ++L+D+YAKCG +E ++E+F    +R+   W+ MI G    
Sbjct: 380 GWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMH 439

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM--DVV 480
           G    A+ +F +M E +V    VT+++VL AC+    ++ G +V    ++  Y +  ++ 
Sbjct: 440 GRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEG-RVFFHEMEPVYGVVPEMK 498

Query: 481 VANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
               ++D+  + G + +A  L+ +M    +   W A++   S+H
Sbjct: 499 HYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLH 542



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 108/438 (24%), Positives = 181/438 (41%), Gaps = 72/438 (16%)

Query: 3   RLFNYKTFSCKQLTH-QSKINAWLRGLSAQAALST-QQCSNSTTTPITFSVSEFNSHSYA 60
           RLF  K  SCK +    S I+A+ +G   + AL    +       P        NS +  
Sbjct: 182 RLF--KGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMP--------NSVTMV 231

Query: 61  TSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPER 120
             L +C +  DL+    +   + +KG  +DL   N +L++Y K   + DA KLFDEMPER
Sbjct: 232 GVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPER 291

Query: 121 NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVF 180
           +  S+   + GY     +  A  +F+ +        P    A   VL+S           
Sbjct: 292 DVFSWTIMLDGYAKMGDYDAARLVFNAM--------PVKEIAAWNVLIS----------- 332

Query: 181 ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKP 240
                               A+   G  + A  +F+ L             Q+  +  KP
Sbjct: 333 --------------------AYEQNGKPKEALAIFNEL-------------QLSKIA-KP 358

Query: 241 NNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIF 300
           +  T    L AC  L  I +    H    +    ++ ++  +L+D+Y K G +  A  +F
Sbjct: 359 DEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVF 418

Query: 301 EEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLD 360
             + ++DV  WS MIA          A++LF  M++A V PN  TF +VL AC+    +D
Sbjct: 419 YSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVD 478

Query: 361 LGNQ-IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE-SPKRNHVTWNTMIVG 418
            G    H +    G++ ++     ++D+  + G +E ++EL  E S   +   W  ++  
Sbjct: 479 EGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGA 538

Query: 419 -----YVQLGEVGKAMIM 431
                 V+LGE+    ++
Sbjct: 539 CSLHMNVELGELASDQLL 556


>gi|225441064|ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Vitis vinifera]
          Length = 882

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 280/842 (33%), Positives = 443/842 (52%), Gaps = 77/842 (9%)

Query: 28  LSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGN 87
           LS Q AL +   S S  T         N H Y   L   ++ DD++    +H  + K   
Sbjct: 54  LSNQPALLSNFPSVSNDT--------VNDHYYLLDLS--VRYDDVELIKAVHASIFKLAE 103

Query: 88  CLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFST 147
             D+   N L+  Y+KL  +P+A K+F  +   N +S+   I G+  S++  +A+ +F  
Sbjct: 104 --DIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFR 161

Query: 148 LHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGC 207
           +   G ELN F+F A L V + +   EL   + A V K+G  +  FV  AL+  +  CG 
Sbjct: 162 MRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGY 221

Query: 208 VEFARKVFDGLFND----------------CFEEALNFFSQMRAV-GFKPNNFTFAFVLK 250
           ++   ++FD + +                  +E A   F  MR + GF+ ++FT + +L 
Sbjct: 222 LDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILV 281

Query: 251 ACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIP 310
           A  GL ++ V +  H   +K  +E ++ V  AL+  YTK G I +   +FE+M  +DVI 
Sbjct: 282 AARGLASM-VGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVIT 340

Query: 311 WSFMIARYAQ---TDLSID----------------------------AVELFCRMRQAFV 339
           W+ MI  Y +   TDL+++                            A+  FCRM +  V
Sbjct: 341 WTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGV 400

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
               FT   VL AC  +    +  QIH  +++ G  S+  +  AL+D+  +CGRM ++ +
Sbjct: 401 ELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQK 460

Query: 400 LFAESPKRNH--VTWNTMIVGYVQLGEVGKAMIMFSK-MLEEQVPATEVTYSSVLRACAS 456
           +F++        + W +MI GY +  +  +A+ +F +  LE  +   +V  ++VL  C +
Sbjct: 461 MFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGT 520

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           LA  E G Q+HC  +K+ +  D+ V N++I MY+KC ++ DA  VF++M   + VSWN +
Sbjct: 521 LAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGL 580

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSAC--SNGGLLEQGEAYFKSMVAN 574
           I+G+ +H    E L V+  M++ G +P+ +TFV ++SA   +N  L++     F SM   
Sbjct: 581 IAGHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTI 640

Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL 634
           Y I+P +EHYTS+V +LG  G L++A ++I  +P +P   +WRALL AC IH+N  IG+ 
Sbjct: 641 YHIDPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKR 700

Query: 635 SAQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVH 683
           +A+H+L  +P D +T++L+SN+Y+    W            K   K PG SWI ++  VH
Sbjct: 701 AAKHLLAMKPLDPSTYILVSNLYSAYGRWHCSDMVREEMRVKGFRKHPGRSWIIHENKVH 760

Query: 684 YFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLAL 743
            F A D SH     I   LE L M+  KAGY+PD S VL +V E +K+ +L+ HS K+A 
Sbjct: 761 SFYARDKSHPQAKDIHSGLELLIMECLKAGYVPDTSFVLHEVEEHQKKDFLFYHSAKIAA 820

Query: 744 AFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGD 803
            + L    P  PIRI+KN+ +C DCHT +K +S +  REI +RD    H F +G CSC D
Sbjct: 821 TYGLLMTRPGRPIRIVKNILLCGDCHTFLKYVSIVTGREIFLRDASGHHCFLNGQCSCKD 880

Query: 804 FW 805
           +W
Sbjct: 881 YW 882


>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 698

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 233/592 (39%), Positives = 346/592 (58%), Gaps = 11/592 (1%)

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           EA+  F +M     +P+ FTF  +LK C  L  +   +  H   +K  +    +V   L+
Sbjct: 107 EAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLI 166

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
            +Y   GE+  ARR+F+EM +++V  W+ M A Y ++    + V+LF  M +  +  ++ 
Sbjct: 167 HMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEV 226

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           T VSVL AC  +  L+LG  I+  V   GL  +  +  +L+D+YAKCG+++ +  LF + 
Sbjct: 227 TLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQM 286

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
            +R+ V W+ MI GY Q     +A+ +F +M +  +   E+T  S+L +CA L ALE G 
Sbjct: 287 DRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGK 346

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
            VH    K    + V +  AL+D YAKCGS+  +  VF  M   N +SW  +I G + +G
Sbjct: 347 WVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNG 406

Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY 584
              + L+ F LM ++   PN++TF+GVLSACS+ GL+++G   F SM  ++GIEP IEHY
Sbjct: 407 QGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHY 466

Query: 585 TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEP 644
             MV +LGRAG +++A + I+ +P QP+ +IWR LL +C +H NVEIG  S + ++  EP
Sbjct: 467 GCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEP 526

Query: 645 EDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHA 693
                ++LLSNIYA    W           EK   K PG S IE  G++H F A D  H+
Sbjct: 527 THSGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKTPGCSLIELDGVIHEFFAEDNVHS 586

Query: 694 DMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPS 753
               I   +E +  + + AGY+P+ +    D  ED+KE  +  HSEKLA+AF L K PP 
Sbjct: 587 QSEEIYNAIEDMMKQIKSAGYVPNTAEARLDAEEDDKESSVSHHSEKLAIAFGLIKSPPG 646

Query: 754 SPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           + IRI KNLR+C DCH A K++SK+  REI++RD  RFHHF++G CSC D+W
Sbjct: 647 TTIRITKNLRVCTDCHNATKLVSKVFNREIVVRDRTRFHHFKEGSCSCNDYW 698



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 138/495 (27%), Positives = 250/495 (50%), Gaps = 25/495 (5%)

Query: 50  SVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLD-LFATNVLLNVYVKLNRLP 108
           S+S F  +     L+ C    DL     IH  ++K    L    A N+L +  + L    
Sbjct: 18  SISLFPENPKTLILEQCKTIRDLNE---IHAHLIKTRLLLKPKVAENLLESAAILLPTSM 74

Query: 109 D-ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVL 167
           D A  +F ++ E ++ ++   I+G+T+     EA+ LF  +H    + + F F   LKV 
Sbjct: 75  DYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVC 134

Query: 168 VSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FN 220
             +        + A + K G  S+ FV   LI  ++ CG VE AR+VFD +       +N
Sbjct: 135 SRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWN 194

Query: 221 DCF---------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT 271
             F         EE +  F +M  +  + +  T   VL AC  L  + + +  +    + 
Sbjct: 195 SMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEK 254

Query: 272 CYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELF 331
             + +  +  +L+D+Y K G++  ARR+F++M ++DV+ WS MI+ Y+Q     +A++LF
Sbjct: 255 GLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLF 314

Query: 332 CRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC 391
             M++A + PN+ T VS+L +CA +  L+ G  +H  + +  +   V +  ALMD YAKC
Sbjct: 315 HEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKC 374

Query: 392 GRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVL 451
           G +E+S+E+F + P +N ++W  +I G    G+  KA+  F  MLE+ V   +VT+  VL
Sbjct: 375 GSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVL 434

Query: 452 RACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDW 508
            AC+    ++ G  +  +++  ++ ++  + +   ++D+  + G I +A + + +M    
Sbjct: 435 SACSHAGLVDEGRDLF-VSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQP 493

Query: 509 NEVSWNAMISGYSMH 523
           N V W  +++   +H
Sbjct: 494 NAVIWRTLLASCKVH 508



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/379 (31%), Positives = 198/379 (52%), Gaps = 11/379 (2%)

Query: 246 AFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD----LYTKSGEISNARRIFE 301
             +L+ C    TIR     H   +KT   +   VA  LL+    L   S  +  A  IF 
Sbjct: 28  TLILEQC---KTIRDLNEIHAHLIKTRLLLKPKVAENLLESAAILLPTS--MDYAVSIFR 82

Query: 302 EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL 361
           ++ + D   ++ MI  +       +A+ LF  M +  V P++FTF  +L+ C+ ++ L  
Sbjct: 83  QIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSE 142

Query: 362 GNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQ 421
           G QIH+L+++ G  S  FV N L+ +YA CG +E +  +F E  +RN  TWN+M  GY +
Sbjct: 143 GEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTK 202

Query: 422 LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVV 481
            G   + + +F +MLE  +   EVT  SVL AC  LA LE G  ++    +     +  +
Sbjct: 203 SGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTL 262

Query: 482 ANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW 541
             +L+DMYAKCG +  AR +FD M+  + V+W+AMISGYS      E L +F  MQ+   
Sbjct: 263 ITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANI 322

Query: 542 RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAA 601
            PN +T V +LS+C+  G LE G+ +    +    ++  +   T+++    + G ++ + 
Sbjct: 323 DPNEITMVSILSSCAVLGALETGK-WVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSI 381

Query: 602 KLIEGIPFQPSVMIWRALL 620
           ++   +P + +V+ W  L+
Sbjct: 382 EVFGKMPVK-NVLSWTVLI 399



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 171/386 (44%), Gaps = 25/386 (6%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L+ C +   L     IH  ++K G     F  N L+++Y     +  A ++FDEM ERN 
Sbjct: 131 LKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNV 190

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
            ++ +   GYT S  + E V LF  +       +     + L     +   EL   +   
Sbjct: 191 RTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRY 250

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-----------------FNDCFEE 225
           V + G   N  + T+L+D ++ CG V+ AR++FD +                  + C  E
Sbjct: 251 VEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRC-RE 309

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           AL+ F +M+     PN  T   +L +C  L  +   K  H    K   ++ + +  AL+D
Sbjct: 310 ALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMD 369

Query: 286 LYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFT 345
            Y K G + ++  +F +MP K+V+ W+ +I   A       A+E F  M +  V PN  T
Sbjct: 370 FYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVT 429

Query: 346 FVSVLQACATMEGLDLGNQIH-SLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           F+ VL AC+    +D G  +  S+    G+   +     ++D+  + G +E + +     
Sbjct: 430 FIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNM 489

Query: 405 P-KRNHVTWNTMIVG-----YVQLGE 424
           P + N V W T++        V++GE
Sbjct: 490 PIQPNAVIWRTLLASCKVHKNVEIGE 515


>gi|297740028|emb|CBI30210.3| unnamed protein product [Vitis vinifera]
          Length = 900

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 280/842 (33%), Positives = 443/842 (52%), Gaps = 77/842 (9%)

Query: 28  LSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGN 87
           LS Q AL +   S S  T         N H Y   L   ++ DD++    +H  + K   
Sbjct: 72  LSNQPALLSNFPSVSNDT--------VNDHYYLLDLS--VRYDDVELIKAVHASIFKLAE 121

Query: 88  CLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFST 147
             D+   N L+  Y+KL  +P+A K+F  +   N +S+   I G+  S++  +A+ +F  
Sbjct: 122 --DIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFR 179

Query: 148 LHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGC 207
           +   G ELN F+F A L V + +   EL   + A V K+G  +  FV  AL+  +  CG 
Sbjct: 180 MRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGY 239

Query: 208 VEFARKVFDGLFND----------------CFEEALNFFSQMRAV-GFKPNNFTFAFVLK 250
           ++   ++FD + +                  +E A   F  MR + GF+ ++FT + +L 
Sbjct: 240 LDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILV 299

Query: 251 ACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIP 310
           A  GL ++ V +  H   +K  +E ++ V  AL+  YTK G I +   +FE+M  +DVI 
Sbjct: 300 AARGLASM-VGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVIT 358

Query: 311 WSFMIARYAQ---TDLSID----------------------------AVELFCRMRQAFV 339
           W+ MI  Y +   TDL+++                            A+  FCRM +  V
Sbjct: 359 WTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGV 418

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
               FT   VL AC  +    +  QIH  +++ G  S+  +  AL+D+  +CGRM ++ +
Sbjct: 419 ELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQK 478

Query: 400 LFAESPKRNH--VTWNTMIVGYVQLGEVGKAMIMFSK-MLEEQVPATEVTYSSVLRACAS 456
           +F++        + W +MI GY +  +  +A+ +F +  LE  +   +V  ++VL  C +
Sbjct: 479 MFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGT 538

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           LA  E G Q+HC  +K+ +  D+ V N++I MY+KC ++ DA  VF++M   + VSWN +
Sbjct: 539 LAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGL 598

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSAC--SNGGLLEQGEAYFKSMVAN 574
           I+G+ +H    E L V+  M++ G +P+ +TFV ++SA   +N  L++     F SM   
Sbjct: 599 IAGHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTI 658

Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL 634
           Y I+P +EHYTS+V +LG  G L++A ++I  +P +P   +WRALL AC IH+N  IG+ 
Sbjct: 659 YHIDPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKR 718

Query: 635 SAQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVH 683
           +A+H+L  +P D +T++L+SN+Y+    W            K   K PG SWI ++  VH
Sbjct: 719 AAKHLLAMKPLDPSTYILVSNLYSAYGRWHCSDMVREEMRVKGFRKHPGRSWIIHENKVH 778

Query: 684 YFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLAL 743
            F A D SH     I   LE L M+  KAGY+PD S VL +V E +K+ +L+ HS K+A 
Sbjct: 779 SFYARDKSHPQAKDIHSGLELLIMECLKAGYVPDTSFVLHEVEEHQKKDFLFYHSAKIAA 838

Query: 744 AFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGD 803
            + L    P  PIRI+KN+ +C DCHT +K +S +  REI +RD    H F +G CSC D
Sbjct: 839 TYGLLMTRPGRPIRIVKNILLCGDCHTFLKYVSIVTGREIFLRDASGHHCFLNGQCSCKD 898

Query: 804 FW 805
           +W
Sbjct: 899 YW 900


>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
 gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
 gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 281/805 (34%), Positives = 412/805 (51%), Gaps = 78/805 (9%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP--ERNTISFVTTIQGYTVS 135
           IH ++L  G  L L  T+ L++ Y+ +  L  A  L    P  +     + + I+ Y  +
Sbjct: 47  IHQKLLSFG-ILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDN 105

Query: 136 SQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVG 195
               + + LF  +H      + + F    K    +          A     G  SN FVG
Sbjct: 106 GCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVG 165

Query: 196 TALIDAFSVCGCVEFARKVFDGL-------FNDCFEE---------ALNFFSQM-RAVGF 238
            AL+  +S C  +  ARKVFD +       +N   E          AL  FS+M    G 
Sbjct: 166 NALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGC 225

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
           +P+N T   VL  C  L T  + K  H  A+ +    +++V   L+D+Y K G +  A  
Sbjct: 226 RPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANT 285

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ---------------------- 336
           +F  M  KDV+ W+ M+A Y+Q     DAV LF +M++                      
Sbjct: 286 VFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGL 345

Query: 337 -------------AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV-------GLLS 376
                        + + PN+ T +SVL  CA++  L  G +IH   ++        G   
Sbjct: 346 GYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGD 405

Query: 377 DVFVSNALMDVYAKCGRMENSVELFAE-SPK-RNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
           +  V N L+D+YAKC +++ +  +F   SPK R+ VTW  MI GY Q G+  KA+ + S+
Sbjct: 406 ENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSE 465

Query: 435 MLEE--QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD-MDVVVANALIDMYAK 491
           M EE  Q      T S  L ACASLAAL  G Q+H   ++   + + + V+N LIDMYAK
Sbjct: 466 MFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAK 525

Query: 492 CGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGV 551
           CGSI+DARLVFD M   NEV+W ++++GY MHG   E L +FD M++ G++ + +T + V
Sbjct: 526 CGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVV 585

Query: 552 LSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQP 611
           L ACS+ G+++QG  YF  M   +G+ P  EHY  +V LLGRAG L+ A +LIE +P +P
Sbjct: 586 LYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEP 645

Query: 612 SVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE------- 664
             ++W A L  C IH  VE+G  +A+ I +     + ++ LLSN+YA A  W+       
Sbjct: 646 PPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRS 705

Query: 665 ----KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSA 720
               K   K PG SW+E       F  GD +H     I  +L     + +  GY+P+   
Sbjct: 706 LMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGF 765

Query: 721 VLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQ 780
            L DV ++EK+  L+ HSEKLALA+ +   P  + IRI KNLR+C DCHTA   +S+I+ 
Sbjct: 766 ALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIID 825

Query: 781 REIIIRDVHRFHHFQDGCCSCGDFW 805
            +II+RD  RFHHF++G CSC  +W
Sbjct: 826 HDIILRDSSRFHHFKNGSCSCKGYW 850



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 143/539 (26%), Positives = 234/539 (43%), Gaps = 72/539 (13%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +++++    ++C +   ++   + H   L  G   ++F  N L+ +Y +   L DA K+F
Sbjct: 126 DNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVF 185

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHRE-GHELNPFAFTAFLKVLVSMGWA 173
           DEM   + +S+ + I+ Y    +   A+ +FS +  E G   +       L    S+G  
Sbjct: 186 DEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTH 245

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD----------------- 216
            L   +           N FVG  L+D ++ CG ++ A  VF                  
Sbjct: 246 SLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGY 305

Query: 217 ---GLFNDC---FE----------------------------EALNFFSQMRAVGFKPNN 242
              G F D    FE                            EAL    QM + G KPN 
Sbjct: 306 SQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNE 365

Query: 243 FTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL---------YVAVALLDLYTKSGEI 293
            T   VL  C  +  +   K  H  A+K  Y +DL          V   L+D+Y K  ++
Sbjct: 366 VTLISVLSGCASVGALMHGKEIHCYAIK--YPIDLRKNGHGDENMVINQLIDMYAKCKKV 423

Query: 294 SNARRIFEEM-PK-KDVIPWSFMIARYAQTDLSIDAVELFCRM--RQAFVAPNQFTFVSV 349
             AR +F+ + PK +DV+ W+ MI  Y+Q   +  A+EL   M        PN FT    
Sbjct: 424 DTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCA 483

Query: 350 LQACATMEGLDLGNQIHSLVVRVGLLS-DVFVSNALMDVYAKCGRMENSVELFAESPKRN 408
           L ACA++  L +G QIH+  +R    +  +FVSN L+D+YAKCG + ++  +F     +N
Sbjct: 484 LVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKN 543

Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHC 468
            VTW +++ GY   G   +A+ +F +M         VT   VL AC+    ++ GM+ + 
Sbjct: 544 EVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME-YF 602

Query: 469 LTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHG 524
             +K  + +     +   L+D+  + G +  A RL+ +M  +   V W A +S   +HG
Sbjct: 603 NRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHG 661


>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 861

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 251/626 (40%), Positives = 368/626 (58%), Gaps = 50/626 (7%)

Query: 224 EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL----YV 279
           EEA+     M A+G +P+  TFA  L AC  L+ + V +  H   LK   + DL    +V
Sbjct: 242 EEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAFVLK---DDDLAANSFV 298

Query: 280 AVALLDLYTKSGEISNARRIFEEMPK--KDVIPWSFMIARYAQ-TDLSIDAVELFCRMR- 335
           A AL+D+Y  + ++S+ARR+F+ +P+  + +  W+ MI  YAQ   +  +A+ELF RM  
Sbjct: 299 ASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEA 358

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
           +A  AP++ T   VL ACA  E       +H  VV+  + S+ FV NALMD+YA+ GRM+
Sbjct: 359 EAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMD 418

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPAT------------ 443
            +  +FA    R+ V+WNT+I G +  G + +A   F  + E Q+P++            
Sbjct: 419 EAHTIFAMIDLRDIVSWNTLITGCIVQGLISEA---FQLVREMQLPSSAASGETMLEGDD 475

Query: 444 -----------EVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKC 492
                       +T  ++L  CA LAA   G ++H   V+   + D+ V +AL+DMYAKC
Sbjct: 476 TSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKC 535

Query: 493 GSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG-WRPNNLTFVGV 551
           G +  AR VFD +   N ++WN +I  Y MHGL  E L +FD M   G   PN +TF+  
Sbjct: 536 GCLALARAVFDRLPRRNVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAA 595

Query: 552 LSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGI-PFQ 610
           L+ACS+ GL+++G   F+ M  +YG EP    +  +V +LGRAG LD+A  +I  + P +
Sbjct: 596 LAACSHSGLVDRGLELFQGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGE 655

Query: 611 PSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE------ 664
             V  W  +LGAC +H NV++GR++A+ + + EP++ + +VLL NIY+ A  WE      
Sbjct: 656 HQVSAWSTMLGACRLHRNVKLGRIAAERLFELEPDEASHYVLLCNIYSAAGLWENSTEVR 715

Query: 665 -----KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLS 719
                +  +KEPG SWIE  G +H F AG+++H +   +   ++ L  + R+ GY+PD S
Sbjct: 716 GMMRQRGVAKEPGCSWIELDGAIHRFMAGESAHPESAQVHAHMDALWERMRREGYVPDTS 775

Query: 720 AVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIV 779
            VL DV E EK   L  HSEKLA+AF L + PP + IR+ KNLR+C DCH A K IS++V
Sbjct: 776 CVLHDVDEAEKAAMLRYHSEKLAIAFGLLRAPPGATIRVAKNLRVCNDCHEAAKFISRMV 835

Query: 780 QREIIIRDVHRFHHFQDGCCSCGDFW 805
            REI++RDV RFHHF+DG CSCGD+W
Sbjct: 836 GREIVLRDVRRFHHFRDGTCSCGDYW 861



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 206/419 (49%), Gaps = 34/419 (8%)

Query: 241 NNFTFAFVLKAC--LGLDTIRVAKSAHGCALKTCY---EMDLYVAVALLDLYTKSGEISN 295
           ++FT   VL AC  L     R+ + AH  ALK  +     + +   ALL +Y + G + +
Sbjct: 151 SSFTLVSVLLACSHLADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDD 210

Query: 296 ARRIF--EEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
           A+R+F        D++ W+ MI+   Q     +AV++   M    V P+  TF S L AC
Sbjct: 211 AQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPAC 270

Query: 354 ATMEGLDLGNQIHSLVVR-VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK--RNHV 410
           + +E L +G ++H+ V++   L ++ FV++AL+D+YA   ++ ++  +F   P+  R   
Sbjct: 271 SRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLG 330

Query: 411 TWNTMIVGYVQLGEVGKAMI-MFSKM-LEEQVPATEVTYSSVLRACASLAALEPGMQVHC 468
            WN MI GY Q G + +  I +FS+M  E     +E T + VL ACA          VH 
Sbjct: 331 MWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHG 390

Query: 469 LTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAE 528
             VK +   +  V NAL+DMYA+ G + +A  +F M++  + VSWN +I+G  + GL +E
Sbjct: 391 YVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISE 450

Query: 529 VLKVFDLMQQ------------------RGWR--PNNLTFVGVLSACSNGGLLEQGEAYF 568
             ++   MQ                    G R  PNN+T + +L  C+      +G+   
Sbjct: 451 AFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIH 510

Query: 569 KSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
              V  + +E  +   +++V +  + G L  A  + + +P + +V+ W  L+ A  +H 
Sbjct: 511 GYAV-RHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRR-NVITWNVLIMAYGMHG 567



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 182/406 (44%), Gaps = 49/406 (12%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGN-CLDLFATNVLLNVYVKLNRLPDATKLFDE 116
           ++A++L +C + + L     +H  VLK  +   + F  + L+++Y    ++  A ++FD 
Sbjct: 262 TFASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDM 321

Query: 117 MPE--RNTISFVTTIQGYTVSSQF-VEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           +PE  R    +   I GY        EA+ LFS +  E     P + T    VL +   +
Sbjct: 322 VPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEA-GCAP-SETTMAGVLPACARS 379

Query: 174 ELC---PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF-----------DGLF 219
           E+      V   V K    SN FV  AL+D ++  G ++ A  +F           + L 
Sbjct: 380 EVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLI 439

Query: 220 NDC-----FEEALNFFSQMR-----AVGFK---------------PNNFTFAFVLKACLG 254
             C       EA     +M+     A G                 PNN T   +L  C  
Sbjct: 440 TGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAV 499

Query: 255 LDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFM 314
           L      K  HG A++   E DL V  AL+D+Y K G ++ AR +F+ +P+++VI W+ +
Sbjct: 500 LAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVL 559

Query: 315 IARYAQTDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR-V 372
           I  Y    L  +A+ LF RM       PN+ TF++ L AC+    +D G ++   + R  
Sbjct: 560 IMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDY 619

Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVELFAE-SPKRNHVT-WNTMI 416
           G     ++   ++DV  + GR++ +  + +  +P  + V+ W+TM+
Sbjct: 620 GFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTML 665


>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Brachypodium distachyon]
          Length = 750

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 265/756 (35%), Positives = 395/756 (52%), Gaps = 94/756 (12%)

Query: 92  FATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHRE 151
           +  N LL  Y     LP A ++FD MP RN ++      G ++ S    A GL   + R 
Sbjct: 47  YLLNTLLTAYASSGLLPHARRVFDAMPGRNLVT------GNSLLSALARA-GLVRDMER- 98

Query: 152 GHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFA 211
                   FT+  +                         +A    AL+  FS  G    A
Sbjct: 99  -------LFTSLPQ------------------------RDAVSYNALLAGFSRAGAHARA 127

Query: 212 RKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT 271
              +  L  D               G +P+  T + V+     L    + +  H   L+ 
Sbjct: 128 AGAYVALLRD-------------EAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRL 174

Query: 272 CYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDV----------------------- 308
            +    +    L+D+Y K G I +ARR+F+EM  K+V                       
Sbjct: 175 GFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALF 234

Query: 309 --------IPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLD 360
                   I W+ M+    Q  L  +A+++F RMR   V  +Q+TF S+L AC  +  L+
Sbjct: 235 EAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALE 294

Query: 361 LGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYV 420
            G QIH+ + R     +VFV +AL+D+Y+KC  +  +  +F     +N ++W  MIVGY 
Sbjct: 295 EGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYG 354

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV 480
           Q G   +A+ +FS+M  + +   + T  SV+ +CA+LA+LE G Q HCL + +     V 
Sbjct: 355 QNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVT 414

Query: 481 VANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG 540
           V+NAL+ +Y KCGSI DA  +FD M+  ++VSW A++ GY+  G + E + +F+ M  +G
Sbjct: 415 VSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKG 474

Query: 541 WRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKA 600
            +P+ +TF+GVLSACS  GL+++G +YF SM  ++ I P  +HYT M+ L  R+G L +A
Sbjct: 475 VKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQA 534

Query: 601 AKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMA 660
            + I+ +P  P    W  LL AC +  ++EIG+ +A+++L  +P++ A++VLL +++A  
Sbjct: 535 EEFIKQMPRCPDAFGWATLLSACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHASK 594

Query: 661 RSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKS 709
             W           ++   KEPG SWI+ +  VH F A D SH     I   L+WLN K 
Sbjct: 595 GEWNDVAKLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSRTIYEKLQWLNSKM 654

Query: 710 RKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCH 769
            + GY PD+S+VL DV + EK   L  HSEKLA+AF L  +PP  PIRI+KNLR+CVDCH
Sbjct: 655 VEEGYKPDVSSVLHDVADAEKVHMLSHHSEKLAIAFGLIFVPPEMPIRIVKNLRVCVDCH 714

Query: 770 TAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            A K ISKI  R+I++RD  RFH F +G CSCGDFW
Sbjct: 715 NATKFISKITGRDILVRDAVRFHKFSNGICSCGDFW 750



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 137/490 (27%), Positives = 228/490 (46%), Gaps = 59/490 (12%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           +L   N LL+   +   + D  +LF  +P+R+ +S+   + G++ +     A G +  L 
Sbjct: 76  NLVTGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALL 135

Query: 150 REGHELNPFAFTAFLKVLV--SMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGC 207
           R+   + P   T    V+V  ++G   L   V   + +LG  + AF G+ L+D ++  G 
Sbjct: 136 RDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGP 195

Query: 208 VEFARKVFD----------------------------------------------GLFND 221
           +  AR+VFD                                              GL  +
Sbjct: 196 IGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQN 255

Query: 222 CFE-EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
             E EAL+ F +MRA G   + +TF  +L AC  L  +   K  H    +TCYE +++V 
Sbjct: 256 GLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVG 315

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
            AL+D+Y+K   +  A  +F  M  K++I W+ MI  Y Q     +AV +F  M++  + 
Sbjct: 316 SALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIK 375

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           P+ FT  SV+ +CA +  L+ G Q H L +  GL   V VSNAL+ +Y KCG +E++  L
Sbjct: 376 PDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRL 435

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F E    + V+W  +++GY Q G+  + + +F KML + V    VT+  VL AC+    +
Sbjct: 436 FDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLV 495

Query: 461 EPGMQ-VHCLTVKANYDMDVVVAN----ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWN 514
           + G    H +      D D+V  +     +ID+Y++ G +  A   +  M    +   W 
Sbjct: 496 DKGRSYFHSM----QQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWA 551

Query: 515 AMISGYSMHG 524
            ++S   + G
Sbjct: 552 TLLSACRLRG 561



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 121/423 (28%), Positives = 201/423 (47%), Gaps = 67/423 (15%)

Query: 263 SAHGCALKTC-YEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQT 321
           + H   L+T  +    Y+   LL  Y  SG + +ARR+F+ MP ++++  + +++  A+ 
Sbjct: 31  AVHALILRTLPHPSPTYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARA 90

Query: 322 DLSIDAVELFCRMRQ---------------------------------AFVAPNQFTFVS 348
            L  D   LF  + Q                                 A V P++ T   
Sbjct: 91  GLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSG 150

Query: 349 VLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES---- 404
           V+   + +    LG Q+H  ++R+G  +  F  + L+D+YAK G + ++  +F E     
Sbjct: 151 VVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKN 210

Query: 405 ---------------------------PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
                                       +R+ +TW TM+ G  Q G   +A+ +F +M  
Sbjct: 211 VVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRA 270

Query: 438 EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITD 497
           E V   + T+ S+L AC +LAALE G Q+H    +  Y+ +V V +AL+DMY+KC S+  
Sbjct: 271 EGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRL 330

Query: 498 ARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSN 557
           A  VF  M   N +SW AMI GY  +G   E ++VF  MQ+ G +P++ T   V+S+C+N
Sbjct: 331 AEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCAN 390

Query: 558 GGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWR 617
              LE+G A F  +    G+ P +    ++V+L G+ G ++ A +L + + F   V  W 
Sbjct: 391 LASLEEG-AQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVS-WT 448

Query: 618 ALL 620
           AL+
Sbjct: 449 ALV 451



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 199/437 (45%), Gaps = 63/437 (14%)

Query: 71  DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM------------- 117
           D      +HCQ+L+ G     F  + L+++Y K+  + DA ++FDEM             
Sbjct: 160 DRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMIT 219

Query: 118 ------------------PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFA 159
                              ER++I++ T + G T +    EA+ +F  +  EG  ++ + 
Sbjct: 220 GLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYT 279

Query: 160 FTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF 219
           F + L    ++   E    + A + +  ++ N FVG+AL+D +S C  V  A  VF  + 
Sbjct: 280 FGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMM 339

Query: 220 ----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKS 263
                           N C EEA+  FS+M+  G KP++FT   V+ +C  L ++     
Sbjct: 340 WKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQ 399

Query: 264 AHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDL 323
            H  AL +     + V+ AL+ LY K G I +A R+F+EM   D + W+ ++  YAQ   
Sbjct: 400 FHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGK 459

Query: 324 SIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-------NQIHSLVVRVGLLS 376
           + + ++LF +M    V P+  TF+ VL AC+    +D G        Q H +V     L 
Sbjct: 460 AKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVP----LD 515

Query: 377 DVFVSNALMDVYAKCGRMENSVELFAESPK-RNHVTWNTMIVGYVQLG--EVGKAMIMFS 433
           D +    ++D+Y++ G ++ + E   + P+  +   W T++      G  E+GK      
Sbjct: 516 DHY--TCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRGDMEIGKWAAENL 573

Query: 434 KMLEEQVPATEVTYSSV 450
             L+ Q PA+ V   S+
Sbjct: 574 LKLDPQNPASYVLLCSM 590



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/284 (22%), Positives = 127/284 (44%), Gaps = 24/284 (8%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
            + +++ + L +C     L+    IH  + +     ++F  + L+++Y K   +  A  +
Sbjct: 275 IDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAV 334

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           F  M  +N IS+   I GY  +    EAV +FS + R+G + + F   + +    ++   
Sbjct: 335 FRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASL 394

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-FNDCF--------- 223
           E            G      V  AL+  +  CG +E A ++FD + F+D           
Sbjct: 395 EEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGY 454

Query: 224 ------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM-- 275
                 +E ++ F +M + G KP+  TF  VL AC     +   +S +  +++  +++  
Sbjct: 455 AQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRS-YFHSMQQDHDIVP 513

Query: 276 --DLYVAVALLDLYTKSGEISNARRIFEEMPK-KDVIPWSFMIA 316
             D Y    ++DLY++SG +  A    ++MP+  D   W+ +++
Sbjct: 514 LDDHY--TCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLS 555



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/256 (21%), Positives = 99/256 (38%), Gaps = 22/256 (8%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +  +  + + SC     L+     HC  L  G    +  +N L+ +Y K   + DA +LF
Sbjct: 377 DDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLF 436

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           DEM   + +S+   + GY    +  E + LF  +  +G + +   F   L      G  +
Sbjct: 437 DEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVD 496

Query: 175 LCPCVFACVYKLGHDSNAFVG--TALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQ 232
                F  + +  HD        T +ID +S  G +               ++A  F  Q
Sbjct: 497 KGRSYFHSMQQ-DHDIVPLDDHYTCMIDLYSRSGWL---------------KQAEEFIKQ 540

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           M      P+ F +A +L AC     + + K A    LK   + +    V L  ++   GE
Sbjct: 541 MPRC---PDAFGWATLLSACRLRGDMEIGKWAAENLLKLDPQ-NPASYVLLCSMHASKGE 596

Query: 293 ISNARRIFEEMPKKDV 308
            ++  ++   M  + V
Sbjct: 597 WNDVAKLRRGMRDRQV 612


>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 684

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 247/599 (41%), Positives = 347/599 (57%), Gaps = 13/599 (2%)

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           N  F  AL  F +MR  G  PN+FTF  V KA   L      K  H  A+K    +D++V
Sbjct: 86  NGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDVFV 145

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
             +  D+Y K+    +AR++F+E+P++++  W+  I+         +A+E F   R+   
Sbjct: 146 GCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGG 205

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
            PN  TF   L AC+    LDLG Q+H LV R G  +DV V N L+D Y KC ++ +S  
Sbjct: 206 QPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEI 265

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +FAE   +N V+W +++  YVQ  E  KA +++ +  +E V  ++   SSVL ACA +A 
Sbjct: 266 IFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAG 325

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
           LE G  +H   VKA  + ++ V +AL+DMY KCG I D+   FD M + N V+ N++I G
Sbjct: 326 LELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGG 385

Query: 520 YSMHGLSAEVLKVFDLMQQRGW--RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
           Y+  G     L +F+ M  RG    PN +TFV +LSACS  G +E G   F SM + YGI
Sbjct: 386 YAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGI 445

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQ 637
           EP  EHY+ +V +LGRAG +++A + I+ +P +P++ +W AL  AC +H    +G L+A+
Sbjct: 446 EPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNACRMHGKPHLGILAAE 505

Query: 638 HILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFR 686
           ++   +P+D   HVLLSN +A A  W +A +           K  G SWI  +  VH F+
Sbjct: 506 NLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEMKGVGIKKGAGYSWITVKNQVHAFQ 565

Query: 687 AGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFA 746
           A D SH     I+ ML  L  K   AGY PDL   L D+ E+EK   +  HSEKLALAF 
Sbjct: 566 AKDRSHKMNKEIQTMLTKLRNKMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFG 625

Query: 747 LFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           L  +P S PIRI KNLRIC DCH+  K +S  V+REII+RD +RFH F+DG CSC D+W
Sbjct: 626 LVALPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 143/487 (29%), Positives = 233/487 (47%), Gaps = 29/487 (5%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLD----LFATNVLLNVYVKLNRLPDATKLFDEMP 118
           L++ I    ++    +H +++K    LD     F  N L+N+Y KL+    A  +    P
Sbjct: 13  LKNAISTSSMRLGRVVHARIVK---TLDSPPPPFLANYLINMYSKLDHPESARLVLRLTP 69

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
            RN +S+ + + G   +  F  A+  F  + REG   N F F    K + S+        
Sbjct: 70  ARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQ 129

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFE-------------- 224
           + A   K G   + FVG +  D +      + ARK+FD +     E              
Sbjct: 130 IHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGR 189

Query: 225 --EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
             EA+  F + R +G +PN+ TF   L AC     + +    HG   ++ ++ D+ V   
Sbjct: 190 PKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNG 249

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+D Y K  +I ++  IF EM  K+ + W  ++A Y Q      A  L+ R R+  V  +
Sbjct: 250 LIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETS 309

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
            F   SVL ACA M GL+LG  IH+  V+  +  ++FV +AL+D+Y KCG +E+S + F 
Sbjct: 310 DFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFD 369

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQV-PATE-VTYSSVLRACASLAAL 460
           E P++N VT N++I GY   G+V  A+ +F  M      PA   +T+ S+L AC+   A+
Sbjct: 370 EMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAV 429

Query: 461 EPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDARLVFDMMNDWNEVS-WNAMI 517
           E GM++   ++K+ Y ++    +   ++DM  + G +  A      M     +S W A+ 
Sbjct: 430 ENGMKIFD-SMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQ 488

Query: 518 SGYSMHG 524
           +   MHG
Sbjct: 489 NACRMHG 495



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 105/392 (26%), Positives = 194/392 (49%), Gaps = 11/392 (2%)

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTC-YEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
              +LK  +   ++R+ +  H   +KT       ++A  L+++Y+K     +AR +    
Sbjct: 9   LGLLLKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLT 68

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
           P ++V+ W+ +++  AQ      A+  F  MR+  VAPN FTF  V +A A++     G 
Sbjct: 69  PARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGK 128

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
           QIH+L V+ G + DVFV  +  D+Y K    +++ +LF E P+RN  TWN  I   V  G
Sbjct: 129 QIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDG 188

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN 483
              +A+  F +          +T+   L AC+    L+ GMQ+H L  ++ +D DV V N
Sbjct: 189 RPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYN 248

Query: 484 ALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRP 543
            LID Y KC  I  + ++F  M   N VSW ++++ Y  +    +   ++   ++     
Sbjct: 249 GLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVET 308

Query: 544 NNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY----TSMVSLLGRAGHLDK 599
           ++     VLSAC+    LE G +     +  + ++ C+E      +++V + G+ G ++ 
Sbjct: 309 SDFMISSVLSACAGMAGLELGRS-----IHAHAVKACVERNIFVGSALVDMYGKCGCIED 363

Query: 600 AAKLIEGIPFQPSVMIWRALLGACIIHNNVEI 631
           + +  + +P + +++   +L+G       V++
Sbjct: 364 SEQAFDEMP-EKNLVTLNSLIGGYAHQGQVDM 394



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 115/280 (41%), Gaps = 31/280 (11%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           NS ++   L +C     L   M +H  V + G   D+   N L++ Y K  ++  +  +F
Sbjct: 208 NSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIF 267

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
            EM  +N +S+ + +  Y  + +  +A  L+    +E  E + F  ++ L     M   E
Sbjct: 268 AEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLE 327

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------- 218
           L   + A   K   + N FVG+AL+D +  CGC+E + + FD +                
Sbjct: 328 LGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYA 387

Query: 219 FNDCFEEALNFFSQM--RAVGFKPNNFTFAFVLKACL-------GLDTIRVAKSAHGCAL 269
                + AL  F  M  R  G  PN  TF  +L AC        G+      KS +G   
Sbjct: 388 HQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYG--- 444

Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
               E        ++D+  ++G +  A    ++MP K  I
Sbjct: 445 ---IEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTI 481


>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 1083

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 262/774 (33%), Positives = 420/774 (54%), Gaps = 41/774 (5%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
             SC+   ++     +H  +L  G   ++  +  L+N+YV    +  +   FD + ++N 
Sbjct: 29  FNSCV---NVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNI 85

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHR--EGHELNP--FAFTAFLKVLVSMGWAELCPC 178
            S+ + I  Y    ++ EA+   + L     G  L P  + F   LK  VS+   +   C
Sbjct: 86  FSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVDGKKVHC 145

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDC 222
              CV+K+G + + FV  +L+  +S  G ++ A KVF  +                 N  
Sbjct: 146 ---CVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGN 202

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
              AL   ++M+  G K +  T A +L  C   D +      H   LK   + D++V+ A
Sbjct: 203 AAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNA 262

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+++Y+K G + +A+ +F++M  +D++ W+ +IA Y Q +    A+  F  M+   + P+
Sbjct: 263 LINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPD 322

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLL-SDVFVSNALMDVYAKCGRMENSVELF 401
             T VS+    + +    +   I   V+R   L  DV + NAL+++YAK G M  +  +F
Sbjct: 323 LLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVF 382

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE--EQVPATEVTYSSVLRACASLAA 459
            + P+++ ++WNT++ GY Q G   +A+  ++ M E  + +P  + T+ S++ A + + A
Sbjct: 383 DQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIP-NQGTWVSIIPAYSHVGA 441

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
           L+ GM++H   +K +  +DV VA  LID+Y KCG + DA  +F  +     V WNA+I+ 
Sbjct: 442 LQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIAS 501

Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
             +HG   E L++F  M     + +++TFV +LSACS+ GL+++G+  F  M   YGI+P
Sbjct: 502 LGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKP 561

Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHI 639
            ++HY  MV LLGRAG+L+KA +L+  +P QP   IW ALL AC I+ N E+G L++  +
Sbjct: 562 SLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRL 621

Query: 640 LDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAG 688
           L+ + E+   +VLLSNIYA    WE           +   K PG S +        F  G
Sbjct: 622 LEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTG 681

Query: 689 DTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALF 748
           + +H     I   L+ L+ K +  GY+PD S V +D+ EDEKE+ L  HSE+LA+AF + 
Sbjct: 682 NQTHPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGII 741

Query: 749 KMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCG 802
             PP SPIRI KNLR+C DCH A K IS+I +REI++RD +RFHHF+DG CSC 
Sbjct: 742 STPPRSPIRIFKNLRVCGDCHNATKYISRISEREIVVRDSNRFHHFKDGICSCA 795



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 97/404 (24%), Positives = 182/404 (45%), Gaps = 25/404 (6%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           + ++ + A+ L  C Q+DD+   + IH  VLK G   D+F +N L+N+Y K  RL DA  
Sbjct: 219 KMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQM 278

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +FD+M  R+ +S+ + I  Y  ++    A+  F  +   G   +     +   +   +  
Sbjct: 279 VFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSD 338

Query: 173 AELCPCVFACVYKLG-HDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------------ 219
             +   +   V +    D +  +G AL++ ++  G +  A  VFD L             
Sbjct: 339 QRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVT 398

Query: 220 ----NDCFEEALNFFSQMRAV-GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
               N    EA++ ++ M       PN  T+  ++ A   +  ++     H   +K    
Sbjct: 399 GYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLY 458

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
           +D++VA  L+DLY K G + +A  +F E+P+   +PW+ +IA         +A++LF  M
Sbjct: 459 LDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDM 518

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR-VGLLSDVFVSNALMDVYAKCGR 393
               V  +  TFVS+L AC+    +D G +   ++ +  G+   +     ++D+  + G 
Sbjct: 519 LAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGY 578

Query: 394 MENSVELFAESP-KRNHVTWNTM-----IVGYVQLGEVGKAMIM 431
           +E + EL    P + +   W  +     I G  +LG +    ++
Sbjct: 579 LEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLL 622


>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 878

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 243/614 (39%), Positives = 364/614 (59%), Gaps = 33/614 (5%)

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC-YEMDLYVAVAL 283
           EA+     M ++G +P+  TFA  L AC  L+ + + +  H   LK      + +VA AL
Sbjct: 265 EAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASAL 324

Query: 284 LDLYTKSGEISNARRIFEEMPK--KDVIPWSFMIARYAQTDLSIDAVELFCRMR-QAFVA 340
           +D+Y  + ++++ARR+F+ +P+  + +  W+ MI  YAQ  +  +A+ELF RM  +A  A
Sbjct: 325 VDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCA 384

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           P++ T   VL ACA  EG      +H  VV+ G+  + FV NALMD+YA+ G M+ +  +
Sbjct: 385 PSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRI 444

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKM------------LEE----QVPATE 444
           FA    R+ V+WNT+I G V  G   +A  + ++M             EE    +     
Sbjct: 445 FAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNN 504

Query: 445 VTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDM 504
           +T  ++L  CA+LAA   G ++H   V+   + D+ V +AL+DMYAKCG +  +R VFD 
Sbjct: 505 ITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDR 564

Query: 505 MNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG-WRPNNLTFVGVLSACSNGGLLEQ 563
           +   N ++WN +I  Y MHGL  E + +FD M   G   PN +TF+  L+ACS+ GL+++
Sbjct: 565 LPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDR 624

Query: 564 GEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGI-PFQPSVMIWRALLGA 622
           G   F  M  ++G++P  + +  +V +LGRAG LD+A  +I  + P +  V  W +LLGA
Sbjct: 625 GLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGA 684

Query: 623 CIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEP 671
           C +H NVE+G ++A+ + + EP + + +VLL NIY+ A  W+K+ +           KEP
Sbjct: 685 CRLHRNVELGEVAAERLFELEPGEASHYVLLCNIYSAAGMWDKSVAVRVRMRRQGVAKEP 744

Query: 672 GLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKE 731
           G SWIE  G +H F AG++SH     +   ++ L  + R+ GY PD S VL DV EDEK 
Sbjct: 745 GCSWIELDGAIHRFMAGESSHPASAEVHAHMDALWERMRREGYAPDTSCVLHDVDEDEKA 804

Query: 732 RYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRF 791
             L  HSEKLA+AF L + PP + IR+ KNLR+C DCH A K +SK+V R+I++RDV RF
Sbjct: 805 AMLRYHSEKLAIAFGLLRAPPGAAIRVAKNLRVCNDCHEAAKFMSKMVGRDIVLRDVRRF 864

Query: 792 HHFQDGCCSCGDFW 805
           HHF+DG CSCGD+W
Sbjct: 865 HHFRDGSCSCGDYW 878



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 141/491 (28%), Positives = 232/491 (47%), Gaps = 53/491 (10%)

Query: 188 HDSNAFVGTALIDAFSVCGCV------------EFARKV-FDGLFNDC-----FEEALNF 229
           H  +  VG AL+ A++ CG +            E    V ++ L +       +E AL+ 
Sbjct: 96  HRPSPAVGNALLTAYARCGDLDAALALFAATATELRDAVSYNSLISALCLFRQWERALDA 155

Query: 230 FSQMRAVG-FKPNNFTFAFVLKAC---LGLDTIRVAKSAHGCALKTCY---EMDLYVAVA 282
              M A G    ++FT   VL AC    G D  R+ + AH  ALK  +     + +   A
Sbjct: 156 LRDMLAEGRHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGFLDEGRERFPFNA 215

Query: 283 LLDLYTKSGEISNARRIFEEMPKK------DVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           LL +Y + G + +A+ +F            DV+ W+ MI+   Q     +AVE+   M  
Sbjct: 216 LLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVS 275

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR-VGLLSDVFVSNALMDVYAKCGRME 395
             V P+  TF S L AC+ +E L LG ++H++V++   L ++ FV++AL+D+YA   ++ 
Sbjct: 276 LGVRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVA 335

Query: 396 NSVELF--AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKM-LEEQVPATEVTYSSVLR 452
           ++  +F     P R    WN MI GY Q G   +A+ +FS+M  E     +E T S VL 
Sbjct: 336 SARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLP 395

Query: 453 ACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS 512
           ACA          +H   VK     +  V NAL+DMYA+ G +  AR +F M++  + VS
Sbjct: 396 ACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVS 455

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQ------------QRGWR----PNNLTFVGVLSACS 556
           WN +I+G  + G +AE  ++   MQ            + G      PNN+T + +L  C+
Sbjct: 456 WNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCA 515

Query: 557 NGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIW 616
                 +G+      V  + +E  I   +++V +  + G L  +  + + +P + +V+ W
Sbjct: 516 ALAAPARGKEIHGYAV-RHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRR-NVITW 573

Query: 617 RALLGACIIHN 627
             L+ A  +H 
Sbjct: 574 NVLIMAYGMHG 584



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 187/414 (45%), Gaps = 47/414 (11%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGN-CLDLFATNVLLNVYVKLNRLPDATKLFDE 116
           ++A++L +C + + L     +H  VLK  +   + F  + L+++Y    ++  A ++FD 
Sbjct: 284 TFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDM 343

Query: 117 MPE--RNTISFVTTIQGYTVSSQFVEAVGLFSTLHRE-GHELNPFAFTAFLKVLV-SMGW 172
           +PE  R    +   I GY  +    EA+ LFS +  E G   +    +  L     S G+
Sbjct: 344 VPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGF 403

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF-----------DGLFND 221
           A     +   V K G   N FV  AL+D ++  G ++ AR++F           + L   
Sbjct: 404 AGK-EAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITG 462

Query: 222 CF-----EEALNFFSQMR----------------AVGFKPNNFTFAFVLKACLGLDTIRV 260
           C       EA    ++M+                A    PNN T   +L  C  L     
Sbjct: 463 CVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPAR 522

Query: 261 AKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQ 320
            K  HG A++   E D+ V  AL+D+Y K G ++ +R +F+ +P+++VI W+ +I  Y  
Sbjct: 523 GKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGM 582

Query: 321 TDLSIDAVELFCRMRQAFVA-PNQFTFVSVLQACATMEGLDLGNQI-HSLVVRVGLLSDV 378
             L  +AV LF  M     A PN+ TF++ L AC+    +D G ++ H +    G+    
Sbjct: 583 HGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTP 642

Query: 379 FVSNALMDVYAKCGRMENSVELFAE-SPKRNHVT-WNTMIVG-----YVQLGEV 425
            +   ++DV  + GR++ +  +     P    V+ W++++        V+LGEV
Sbjct: 643 DLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRLHRNVELGEV 696


>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
          Length = 1027

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 264/764 (34%), Positives = 403/764 (52%), Gaps = 30/764 (3%)

Query: 71   DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQ 130
            D      I  QV+K G    L   N L+++   +  +  A  +FD+M ER+TIS+ +   
Sbjct: 265  DESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAA 324

Query: 131  GYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDS 190
             Y  +    E+  +FS + R   E+N    +  L VL  +   +    +   V K+G DS
Sbjct: 325  AYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDS 384

Query: 191  NAFVGTALIDAFSVCGCVEFARKVFDGL---------------FNDCFE-EALNFFSQMR 234
               V   L+  ++  G    A  VF  +                ND    +AL     M 
Sbjct: 385  VVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMI 444

Query: 235  AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
            + G   N  TF   L AC   D     +  HG  + +    +  +  AL+ +Y K GE+S
Sbjct: 445  SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMS 504

Query: 295  NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
             +RR+  +MP++DV+ W+ +I  YA+ +    A+  F  MR   V+ N  T VSVL AC 
Sbjct: 505  ESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSAC- 563

Query: 355  TMEG--LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTW 412
             + G  L+ G  +H+ +V  G  SD  V N+L+ +YAKCG + +S +LF     RN +TW
Sbjct: 564  LLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITW 623

Query: 413  NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
            N M+      G   + + + SKM    V   + ++S  L A A LA LE G Q+H L VK
Sbjct: 624  NAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVK 683

Query: 473  ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
              ++ D  + NA  DMY+KCG I +   +     + +  SWN +IS    HG   EV   
Sbjct: 684  LGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCAT 743

Query: 533  FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
            F  M + G +P ++TFV +L+ACS+GGL+++G AY+  +  ++G+EP IEH   ++ LLG
Sbjct: 744  FHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLG 803

Query: 593  RAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVL 652
            R+G L +A   I  +P +P+ ++WR+LL +C IH N++ GR +A+++   EPED++ +VL
Sbjct: 804  RSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVL 863

Query: 653  LSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGM 701
             SN++A    WE           K   K+   SW++ +  V  F  GD +H     I   
Sbjct: 864  SSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAK 923

Query: 702  LEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKN 761
            LE +    +++GY+ D S  L+D  E++KE  LW HSE+LALA+AL   P  S +RI KN
Sbjct: 924  LEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKN 983

Query: 762  LRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            LRIC DCH+  K +S+++ R I++RD +RFHHF+ G CSC D+W
Sbjct: 984  LRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 1027



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 156/561 (27%), Positives = 262/561 (46%), Gaps = 17/561 (3%)

Query: 74  TAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYT 133
           T   +H   +K    L +  TN L+N+Y K  R+  A  LFD MP RN +S+ T + G  
Sbjct: 90  TGRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIV 149

Query: 134 VSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG--WAELCPCVFACVYKLGHDSN 191
               ++E +  F  +   G + + F   + +      G  + E    V   V K G  S+
Sbjct: 150 RVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQ-VHGFVAKSGLLSD 208

Query: 192 AFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLK- 250
            +V TA++  + V G V  +RKVF+ + +      +++ S M     K        + K 
Sbjct: 209 VYVSTAILHLYGVYGLVSCSRKVFEEMPD---RNVVSWTSLMVGYSDKGEPEEVIDIYKD 265

Query: 251 ACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIP 310
             LG   I       G  +K+  E  L V  +L+ +    G +  A  IF++M ++D I 
Sbjct: 266 ESLGRQII-------GQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTIS 318

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV 370
           W+ + A YAQ     ++  +F  MR+     N  T  ++L     ++    G  IH LVV
Sbjct: 319 WNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVV 378

Query: 371 RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMI 430
           ++G  S V V N L+ +YA  GR   +  +F + P ++ ++WN+++  +V  G    A+ 
Sbjct: 379 KMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALG 438

Query: 431 MFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYA 490
           +   M+        VT++S L AC +    E G  +H L V +    + ++ NAL+ MY 
Sbjct: 439 LLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYG 498

Query: 491 KCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVG 550
           K G ++++R V   M   + V+WNA+I GY+      + L  F  M+  G   N +T V 
Sbjct: 499 KIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVS 558

Query: 551 VLSAC-SNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF 609
           VLSAC   G LLE+G+    + + + G E       S++++  + G L  +  L  G+  
Sbjct: 559 VLSACLLPGDLLERGKP-LHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD- 616

Query: 610 QPSVMIWRALLGACIIHNNVE 630
             +++ W A+L A   H + E
Sbjct: 617 NRNIITWNAMLAANAHHGHGE 637



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 125/492 (25%), Positives = 232/492 (47%), Gaps = 21/492 (4%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E NS + +T L      D  +    IH  V+K G    +   N LL +Y    R  +A  
Sbjct: 348 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 407

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +F +MP ++ IS+ + +  +    + ++A+GL  ++   G  +N   FT+ L    +  +
Sbjct: 408 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 467

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKV-----------FDGLFND 221
            E    +   V   G   N  +G AL+  +   G +  +R+V           ++ L   
Sbjct: 468 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 527

Query: 222 CFEE-----ALNFFSQMRAVGFKPNNFTFAFVLKAC-LGLDTIRVAKSAHGCALKTCYEM 275
             E+     AL  F  MR  G   N  T   VL AC L  D +   K  H   +   +E 
Sbjct: 528 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 587

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
           D +V  +L+ +Y K G++S+++ +F  +  +++I W+ M+A  A      + ++L  +MR
Sbjct: 588 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR 647

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
              V+ +QF+F   L A A +  L+ G Q+H L V++G   D F+ NA  D+Y+KCG + 
Sbjct: 648 SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIG 707

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
             V++   S  R+  +WN +I    + G   +    F +MLE  +    VT+ S+L AC+
Sbjct: 708 EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACS 767

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANAL--IDMYAKCGSITDAR-LVFDMMNDWNEVS 512
               ++ G+  + +  + ++ ++  + + +  ID+  + G + +A   +  M    N++ 
Sbjct: 768 HGGLVDKGLAYYDMIAR-DFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLV 826

Query: 513 WNAMISGYSMHG 524
           W ++++   +HG
Sbjct: 827 WRSLLASCKIHG 838


>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
 gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
          Length = 796

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 265/785 (33%), Positives = 417/785 (53%), Gaps = 41/785 (5%)

Query: 52  SEFNSHS-YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDA 110
           S F+S   Y  +L+ C    DL++   IH ++    +  ++F  N ++  Y K   +  A
Sbjct: 22  SRFDSSGHYRDALRQC---QDLESVRQIHDRISGAASA-NVFLGNEIVRAYGKCGSVASA 77

Query: 111 TKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSM 170
              FD +  +N  S+ + +  Y  +  +  A+ L+    R   + NP  +T  L    S+
Sbjct: 78  RVAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYK---RMDLQPNPVVYTTVLGACASI 134

Query: 171 GWAELCPCVFACVYKL-GHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF---------- 219
              E    + + +    G   +  +  +L+  ++ CG +E A+++F+ +           
Sbjct: 135 EALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNA 194

Query: 220 -------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC 272
                  +  FEEA+  +  M     +P+  TF  VL AC  L  +   +  H       
Sbjct: 195 MIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRG 251

Query: 273 YEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFC 332
            E+DL +  ALL +Y +   + +A +IF+ +P++DV+ WS MIA +A+TDL  +A+E + 
Sbjct: 252 TELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYS 311

Query: 333 RMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCG 392
           +M+   V PN +TF SVL ACA++  L  G  +H  ++  G    +    AL+D+Y   G
Sbjct: 312 KMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYG 371

Query: 393 RMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE-QVPATEVTYSSVL 451
            ++ +  LF +   R+   W  +I GY + G     + ++ +M    +VPAT++ YS V+
Sbjct: 372 SLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVI 431

Query: 452 RACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEV 511
            ACASL A     Q H          D V+A +L++MY++ G++  AR VFD M+  + +
Sbjct: 432 SACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTL 491

Query: 512 SWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSM 571
           +W  +I+GY+ HG     L ++  M+  G  P+ LTF+ VL ACS+ GL EQG+  F S+
Sbjct: 492 AWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISI 551

Query: 572 VANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEI 631
            ++Y + P I HY+ ++ LL RAG L  A +LI  +P +P+ + W +LLGA  IH +V+ 
Sbjct: 552 QSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKR 611

Query: 632 GRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQG 680
              +A  I   +P D A++VLLSN++A+  +    AS           K  G SWIE   
Sbjct: 612 ATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVAD 671

Query: 681 MVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEK 740
            +H F  GD SH     I   L+ L+ K ++AGY+P+   VL DV E EKE  L +HSEK
Sbjct: 672 QIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAGYVPESEEVLHDVGEKEKELLLRLHSEK 731

Query: 741 LALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCS 800
           LA+AF L    P + +RI   LRIC DCH+A+K IS I +REII+RD  RFH F+DG CS
Sbjct: 732 LAIAFGLIATAPGTTLRIFNTLRICHDCHSAVKFISAIARREIIVRDSSRFHKFRDGQCS 791

Query: 801 CGDFW 805
           CGD+W
Sbjct: 792 CGDYW 796


>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
 gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
 gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
 gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 990

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 254/702 (36%), Positives = 385/702 (54%), Gaps = 29/702 (4%)

Query: 132 YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSN 191
           Y  S Q+   +  F+ +     E +   F   L   V +    L   V     KLG D  
Sbjct: 290 YLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLM 349

Query: 192 AFVGTALIDAFSVCGCVEFARKVFD---------------GLFNDCFE-EALNFFSQMRA 235
             V  +LI+ +       FAR VFD               G+  +  E EA+  F Q+  
Sbjct: 350 LTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR 409

Query: 236 VGFKPNNFTFAFVLKACLGL-DTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
            G KP+ +T   VLKA   L + + ++K  H  A+K     D +V+ AL+D Y+++  + 
Sbjct: 410 CGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMK 469

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
            A  +FE     D++ W+ M+A Y Q+      ++LF  M +     + FT  +V + C 
Sbjct: 470 EAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCG 528

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
            +  ++ G Q+H+  ++ G   D++VS+ ++D+Y KCG M  +   F   P  + V W T
Sbjct: 529 FLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTT 588

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
           MI G ++ GE  +A  +FS+M    V   E T +++ +A + L ALE G Q+H   +K N
Sbjct: 589 MISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLN 648

Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
              D  V  +L+DMYAKCGSI DA  +F  +   N  +WNAM+ G + HG   E L++F 
Sbjct: 649 CTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFK 708

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
            M+  G +P+ +TF+GVLSACS+ GL+ +   + +SM  +YGI+P IEHY+ +   LGRA
Sbjct: 709 QMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRA 768

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLS 654
           G + +A  LIE +  + S  ++R LL AC +  + E G+  A  +L+ EP D + +VLLS
Sbjct: 769 GLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLS 828

Query: 655 NIYAMARSWEK-----------AASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLE 703
           N+YA A  W++              K+PG SWIE +  +H F   D S+    +I   ++
Sbjct: 829 NMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVK 888

Query: 704 WLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLR 763
            +    ++ GY+P+    L DV E+EKER L+ HSEKLA+AF L   PPS+PIR+IKNLR
Sbjct: 889 DMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLR 948

Query: 764 ICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +C DCH A+K I+K+  REI++RD +RFH F+DG CSCGD+W
Sbjct: 949 VCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 161/563 (28%), Positives = 282/563 (50%), Gaps = 28/563 (4%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L+ C+ +  +  + + H    K G   D F    L+N+Y+K  ++ +   LF+EMP R+ 
Sbjct: 152 LKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDV 211

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           + +   ++ Y       EA+ L S  H  G  LNP   T  L   +S             
Sbjct: 212 VLWNLMLKAYLEMGFKEEAIDLSSAFHSSG--LNPNEITLRLLARIS------------- 256

Query: 183 VYKLGHDSNAFVGTALI---DAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFK 239
               G DS+A    +     DA SV   +   + + + L +  +   L  F+ M     +
Sbjct: 257 ----GDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVE 312

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
            +  TF  +L   + +D++ + +  H  ALK   ++ L V+ +L+++Y K  +   AR +
Sbjct: 313 CDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTV 372

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM-EG 358
           F+ M ++D+I W+ +IA  AQ  L ++AV LF ++ +  + P+Q+T  SVL+A +++ EG
Sbjct: 373 FDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEG 432

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           L L  Q+H   +++  +SD FVS AL+D Y++  R     E+  E    + V WN M+ G
Sbjct: 433 LSLSKQVHVHAIKINNVSDSFVSTALIDAYSR-NRCMKEAEILFERHNFDLVAWNAMMAG 491

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           Y Q  +  K + +F+ M ++   + + T ++V + C  L A+  G QVH   +K+ YD+D
Sbjct: 492 YTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLD 551

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
           + V++ ++DMY KCG ++ A+  FD +   ++V+W  MISG   +G       VF  M+ 
Sbjct: 552 LWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRL 611

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQG-EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHL 597
            G  P+  T   +  A S    LEQG + +  ++  N   +P +   TS+V +  + G +
Sbjct: 612 MGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVG--TSLVDMYAKCGSI 669

Query: 598 DKAAKLIEGIPFQPSVMIWRALL 620
           D A  L + I    ++  W A+L
Sbjct: 670 DDAYCLFKRIEMM-NITAWNAML 691



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 142/462 (30%), Positives = 234/462 (50%), Gaps = 19/462 (4%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L + ++ D L     +HC  LK G  L L  +N L+N+Y KL +   A  +FD M ER+ 
Sbjct: 322 LATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDL 381

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA-ELCPCVFA 181
           IS+ + I G   +   VEAV LF  L R G + + +  T+ LK   S+     L   V  
Sbjct: 382 ISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHV 441

Query: 182 CVYKLGHDSNAFVGTALIDAFSVCGCVE-----FARKVFDGLFNDCF----------EEA 226
              K+ + S++FV TALIDA+S   C++     F R  FD +  +             + 
Sbjct: 442 HAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFDLVAWNAMMAGYTQSHDGHKT 501

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           L  F+ M   G + ++FT A V K C  L  I   K  H  A+K+ Y++DL+V+  +LD+
Sbjct: 502 LKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDM 561

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y K G++S A+  F+ +P  D + W+ MI+   +      A  +F +MR   V P++FT 
Sbjct: 562 YVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTI 621

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
            ++ +A + +  L+ G QIH+  +++   +D FV  +L+D+YAKCG ++++  LF     
Sbjct: 622 ATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM 681

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
            N   WN M+VG  Q GE  + + +F +M    +   +VT+  VL AC S + L      
Sbjct: 682 MNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSAC-SHSGLVSEAYK 740

Query: 467 HCLTVKANYDM--DVVVANALIDMYAKCGSITDARLVFDMMN 506
           H  ++  +Y +  ++   + L D   + G +  A  + + M+
Sbjct: 741 HMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMS 782



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 106/417 (25%), Positives = 190/417 (45%), Gaps = 53/417 (12%)

Query: 162 AFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN- 220
            FL+  ++     L  C  A +     +   F+   LI  +S CG + +AR+VFD + + 
Sbjct: 44  GFLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDR 103

Query: 221 ----------------DC----FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRV 260
                           +C     ++A   F  +R      +  T + +LK CL    +  
Sbjct: 104 DLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWA 163

Query: 261 AKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQ 320
           ++S HG A K   + D +VA AL+++Y K G++   + +FEEMP +DV+ W+ M+  Y +
Sbjct: 164 SESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLE 223

Query: 321 TDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFV 380
                +A++L      + + PN+ T    L+  A + G D                    
Sbjct: 224 MGFKEEAIDLSSAFHSSGLNPNEIT----LRLLARISGDD-------------------- 259

Query: 381 SNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQV 440
                   +  G++++       S     +  N  +  Y+  G+    +  F+ M+E  V
Sbjct: 260 --------SDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDV 311

Query: 441 PATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARL 500
              +VT+  +L     + +L  G QVHC+ +K   D+ + V+N+LI+MY K      AR 
Sbjct: 312 ECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFART 371

Query: 501 VFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSN 557
           VFD M++ + +SWN++I+G + +GL  E + +F  + + G +P+  T   VL A S+
Sbjct: 372 VFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS 428


>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
          Length = 1084

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 248/766 (32%), Positives = 397/766 (51%), Gaps = 61/766 (7%)

Query: 27  GLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKG 86
           GL  +A    +Q   +   P  + +S        + L SC + +      ++H Q  K+G
Sbjct: 122 GLGEEALWLYRQMHRAGVVPTPYVLS--------SVLSSCTKAELFAQGRSVHAQGYKQG 173

Query: 87  NCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFS 146
            C + F  N L+ +Y++      A ++F +MP R+T++F T I G+   +    A+ +F 
Sbjct: 174 FCSETFVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFE 233

Query: 147 TLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCG 206
            +   G   +    ++ L    S+G  +    + + ++K G  S+  +  +L+D +  CG
Sbjct: 234 EMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCG 293

Query: 207 CVEFARKVFD-----------------GLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVL 249
            VE A  +F+                 G  ND   ++   F QM+  G +PN FT+  +L
Sbjct: 294 DVETALVIFNLGNRTNVVLWNLILVAFGQIND-LAKSFELFCQMQTAGIRPNQFTYPCIL 352

Query: 250 KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
           + C     I + +  H  ++KT +E D+YV+  L+D+Y+K G +  ARR+ E + +KDV+
Sbjct: 353 RTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVV 412

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
            W+ MIA Y Q +   DA+  F  M++  + P+     S +  CA ++ +  G QIH+ V
Sbjct: 413 SWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARV 472

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAM 429
              G   DV + NAL+++YA+CGR+  +   F E   ++ +TWN ++ G+ Q G   +A+
Sbjct: 473 YVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEAL 532

Query: 430 IMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMY 489
            +F +M +  V     T+ S L A A+LA ++ G Q+H   +K  +  +  V NALI +Y
Sbjct: 533 KVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLY 592

Query: 490 AKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFV 549
            KCGS  DA++ F  M++ NEVSWN +I+  S HG   E L  FD M++           
Sbjct: 593 GKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDFFDQMKK----------- 641

Query: 550 GVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF 609
                        +G +YFKSM   YGI P  +HY  ++ + GRAG LD+A K +E +P 
Sbjct: 642 -------------EGLSYFKSMSDKYGIRPRPDHYACVIDIFGRAGQLDRAKKFVEEMPI 688

Query: 610 QPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW------ 663
               M+WR LL AC +H N+E+G L+A+H+L+ EP D A++VLLSN YA+   W      
Sbjct: 689 AADAMVWRTLLSACKVHKNIEVGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQV 748

Query: 664 -----EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDL 718
                ++   KEPG SWIE + +VH F  GD  H     I   L  +N +  K GY  + 
Sbjct: 749 RKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEK 808

Query: 719 SAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRI 764
             +  D  ++ ++    VHSEKLA+ F L  +PP  P+R+IKNLR+
Sbjct: 809 YHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLRV 854



 Score =  295 bits (755), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 182/589 (30%), Positives = 297/589 (50%), Gaps = 25/589 (4%)

Query: 59  YATSLQSCIQNDD-LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +A +L++C  N    Q    IH + + +G   D    N+L+++Y K   +  A ++F+E+
Sbjct: 44  FACALRACRGNGRRWQVVPEIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEEL 103

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
             R+ +S+V  + GY  +    EA+ L+  +HR G    P+  ++   VL S   AEL  
Sbjct: 104 SARDNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVVPTPYVLSS---VLSSCTKAELFA 160

Query: 178 ---CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF---- 223
               V A  YK G  S  FVG ALI  +  CG    A +VF  +       FN       
Sbjct: 161 QGRSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHA 220

Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                E AL  F +M++ G  P+  T + +L AC  L  ++     H    K     D  
Sbjct: 221 QCAHGEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYI 280

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           +  +LLDLY K G++  A  IF    + +V+ W+ ++  + Q +    + ELFC+M+ A 
Sbjct: 281 MEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAG 340

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           + PNQFT+  +L+ C     +DLG QIHSL V+ G  SD++VS  L+D+Y+K G +E + 
Sbjct: 341 IRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKAR 400

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            +     +++ V+W +MI GYVQ      A+  F +M +  +    +  +S +  CA + 
Sbjct: 401 RVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIK 460

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           A+  G+Q+H     + Y  DV + NAL+++YA+CG I +A   F+ +   +E++WN ++S
Sbjct: 461 AMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVS 520

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           G++  GL  E LKVF  M Q G + N  TFV  LSA +N   ++QG+    + V   G  
Sbjct: 521 GFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQ-IHARVIKTGHS 579

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
              E   +++SL G+ G  + A      +  +  V  W  ++ +C  H 
Sbjct: 580 FETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVS-WNTIITSCSQHG 627



 Score =  249 bits (637), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 150/523 (28%), Positives = 257/523 (49%), Gaps = 23/523 (4%)

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG--WAE 174
           M  R   S   ++ G+       + + LF+   R+   L P  F   L+     G  W +
Sbjct: 1   MTRRGAASLGWSLAGFLAQEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRW-Q 59

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
           + P + A     G   +  VG  LID +S  G V  AR+VF+ L                
Sbjct: 60  VVPEIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYA 119

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            N   EEAL  + QM   G  P  +  + VL +C   +     +S H    K  +  + +
Sbjct: 120 QNGLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETF 179

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V  AL+ LY + G    A R+F +MP +D + ++ +I+ +AQ      A+E+F  M+ + 
Sbjct: 180 VGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSG 239

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           ++P+  T  S+L ACA++  L  G Q+HS + + G+ SD  +  +L+D+Y KCG +E ++
Sbjct: 240 LSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETAL 299

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            +F    + N V WN ++V + Q+ ++ K+  +F +M    +   + TY  +LR C    
Sbjct: 300 VIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTG 359

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
            ++ G Q+H L+VK  ++ D+ V+  LIDMY+K G +  AR V +M+ + + VSW +MI+
Sbjct: 360 EIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIA 419

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG-EAYFKSMVANYGI 577
           GY  H    + L  F  MQ+ G  P+N+     +S C+    + QG + + +  V+ Y  
Sbjct: 420 GYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSG 479

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
           +  I  + ++V+L  R G + +A    E I  +  +  W  L+
Sbjct: 480 DVSI--WNALVNLYARCGRIREAFSSFEEIEHKDEI-TWNGLV 519


>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g30700; AltName: Full=Protein DYW9
 gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
 gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
 gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 792

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 266/758 (35%), Positives = 401/758 (52%), Gaps = 36/758 (4%)

Query: 79  HCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQF 138
           H Q++  G   D+     L      L  +  A  +F  +   +   F   ++G++V+   
Sbjct: 40  HAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESP 99

Query: 139 VEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE--LCPCVFACVYKLGHDSNAFVGT 196
             ++ +F+ L R+  +L P + T    +  + G+ +      +       G DS   +G+
Sbjct: 100 HSSLSVFAHL-RKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGS 158

Query: 197 ALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQM-RAVGFK 239
            ++  +     VE ARKVFD +                 N+ + E++  F  +      +
Sbjct: 159 NIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTR 218

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKT-CYEMDLYVAVALLDLYTKSGEISNARR 298
            +  T   +L A   L  +R+    H  A KT CY  D YV    + LY+K G+I     
Sbjct: 219 LDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHD-YVLTGFISLYSKCGKIKMGSA 277

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           +F E  K D++ ++ MI  Y     +  ++ LF  +  +       T VS++        
Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGH--- 334

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           L L   IH   ++   LS   VS AL  VY+K   +E++ +LF ESP+++  +WN MI G
Sbjct: 335 LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISG 394

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           Y Q G    A+ +F +M + +     VT + +L ACA L AL  G  VH L    +++  
Sbjct: 395 YTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESS 454

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
           + V+ ALI MYAKCGSI +AR +FD+M   NEV+WN MISGY +HG   E L +F  M  
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLN 514

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLD 598
            G  P  +TF+ VL ACS+ GL+++G+  F SM+  YG EP ++HY  MV +LGRAGHL 
Sbjct: 515 SGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQ 574

Query: 599 KAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYA 658
           +A + IE +  +P   +W  LLGAC IH +  + R  ++ + + +P++   HVLLSNI++
Sbjct: 575 RALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHS 634

Query: 659 MARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNM 707
             R++ +AA+           K PG + IE     H F +GD SH  +  I   LE L  
Sbjct: 635 ADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEG 694

Query: 708 KSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVD 767
           K R+AGY P+    L DV E+E+E  + VHSE+LA+AF L    P + IRIIKNLR+C+D
Sbjct: 695 KMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLD 754

Query: 768 CHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           CHT  K+ISKI +R I++RD +RFHHF+DG CSCGD+W
Sbjct: 755 CHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 137/488 (28%), Positives = 235/488 (48%), Gaps = 22/488 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           NS +YA ++ +     D +    IH Q +  G   +L   + ++ +Y K  R+ DA K+F
Sbjct: 118 NSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVF 177

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREG-HELNPFAFTAFLKVLVSMGWA 173
           D MPE++TI + T I GY  +  +VE++ +F  L  E    L+       L  +  +   
Sbjct: 178 DRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQEL 237

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL--------------- 218
            L   + +   K G  S+ +V T  I  +S CG ++    +F                  
Sbjct: 238 RLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGY 297

Query: 219 -FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
             N   E +L+ F ++   G +  + T   ++     L  I    + HG  LK+ +    
Sbjct: 298 TSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIY---AIHGYCLKSNFLSHA 354

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
            V+ AL  +Y+K  EI +AR++F+E P+K +  W+ MI+ Y Q  L+ DA+ LF  M+++
Sbjct: 355 SVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKS 414

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
             +PN  T   +L ACA +  L LG  +H LV      S ++VS AL+ +YAKCG +  +
Sbjct: 415 EFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEA 474

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
             LF    K+N VTWNTMI GY   G+  +A+ +F +ML   +  T VT+  VL AC+  
Sbjct: 475 RRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHA 534

Query: 458 AALEPGMQV-HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN-DWNEVSWNA 515
             ++ G ++ + +  +  ++  V     ++D+  + G +  A    + M+ +     W  
Sbjct: 535 GLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWET 594

Query: 516 MISGYSMH 523
           ++    +H
Sbjct: 595 LLGACRIH 602


>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Cucumis sativus]
          Length = 678

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 232/579 (40%), Positives = 351/579 (60%), Gaps = 12/579 (2%)

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR 297
            +P    ++ +L  C  L  ++  ++ H     + +E DL +   +L++Y K G +  A+
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160

Query: 298 RIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATME 357
            +F++MP KD++ W+ +I+ Y+Q+  + +A+ LF +M      PN+FT  S+L+A  T  
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220

Query: 358 GLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIV 417
               G Q+H+  ++ G   +V V ++L+D+YA+   M  +  +F     +N V+WN +I 
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280

Query: 418 GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM 477
           G+ + GE    M +F +ML +    T  TYSSV  ACAS  +LE G  VH   +K+    
Sbjct: 281 GHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQP 340

Query: 478 DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQ 537
              + N LIDMYAK GSI DA+ VF  +   + VSWN++ISGY+ HGL AE L++F+ M 
Sbjct: 341 IAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQML 400

Query: 538 QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHL 597
           +   +PN +TF+ VL+ACS+ GLL++G+ YF+ ++  + IE  + H+ ++V LLGRAG L
Sbjct: 401 KAKVQPNEITFLSVLTACSHSGLLDEGQYYFE-LMKKHKIEAQVAHHVTVVDLLGRAGRL 459

Query: 598 DKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIY 657
           ++A K IE +P +P+  +W ALLG+C +H N+++G  +A+ I + +P D   HVLLSNIY
Sbjct: 460 NEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIY 519

Query: 658 AMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLN 706
           A A     AA            KEP  SW+E +  VH F A D SH     I+ M E ++
Sbjct: 520 ASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKIS 579

Query: 707 MKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICV 766
            K ++ GY+PD S VL  + + ++E  L  HSEKLALAFA+ K PP   IRI KN+RIC 
Sbjct: 580 GKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICG 639

Query: 767 DCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           DCH+A K  S+++ REII+RD +RFHHF  G CSC D+W
Sbjct: 640 DCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 678



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 183/375 (48%), Gaps = 17/375 (4%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           Y+  L  C     L+    IH  +       DL   N +LN+Y K   L +A  LFD+MP
Sbjct: 108 YSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMP 167

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
            ++ +S+   I GY+ S Q  EA+ LF  +   G + N F  ++ LK   +         
Sbjct: 168 TKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQ 227

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF-------- 223
           + A   K G+D N  VG++L+D ++    +  A+ +F+ L       +N           
Sbjct: 228 LHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGE 287

Query: 224 -EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
            E  +  F QM   GF+P +FT++ V  AC    ++   K  H   +K+  +   Y+   
Sbjct: 288 GEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNT 347

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+D+Y KSG I +A+++F  + K+D++ W+ +I+ YAQ  L  +A++LF +M +A V PN
Sbjct: 348 LIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPN 407

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           + TF+SVL AC+    LD G     L+ +  + + V     ++D+  + GR+  + +   
Sbjct: 408 EITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIE 467

Query: 403 ESP-KRNHVTWNTMI 416
           E P K     W  ++
Sbjct: 468 EMPIKPTAAVWGALL 482



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/254 (19%), Positives = 103/254 (40%), Gaps = 25/254 (9%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +Y++   +C  +  L+    +H  V+K G     +  N L+++Y K   + DA K+F  +
Sbjct: 309 TYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRL 368

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
            +++ +S+ + I GY       EA+ LF  + +   + N   F + L      G  +   
Sbjct: 369 VKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQ 428

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVG 237
             F  + K   ++       ++D     G +                EA  F  +M    
Sbjct: 429 YYFELMKKHKIEAQVAHHVTVVDLLGRAGRL---------------NEANKFIEEMP--- 470

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA---VALLDLYTKSGEIS 294
            KP    +  +L +C     + +       A +  +E+D + +   V L ++Y  +G +S
Sbjct: 471 IKPTAAVWGALLGSCRMHKNMDLGVY----AAEQIFELDPHDSGPHVLLSNIYASAGRLS 526

Query: 295 NARRIFEEMPKKDV 308
           +A ++ + M +  V
Sbjct: 527 DAAKVRKMMKESGV 540


>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
          Length = 805

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 263/766 (34%), Positives = 401/766 (52%), Gaps = 67/766 (8%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           SE  + +Y++ LQ C  +  L     +H  +      +D      L+++Y     L +  
Sbjct: 95  SELETKTYSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGR 154

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
           ++FD M ++N   +   +  Y     F E++ LF  +  +G E       + L       
Sbjct: 155 RVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASEL------- 207

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFS 231
           + +LC            D +     ++I  +           V +GL     E  L  + 
Sbjct: 208 FDKLC------------DRDVISWNSMISGY-----------VSNGLT----ERGLEIYK 240

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
           QM  +G   +  T   VL  C    T+ + K+ H  A+K+ +E  +  +  LLD+Y+K G
Sbjct: 241 QMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCG 300

Query: 292 EISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQ 351
           ++  A R+FE+M +++V+ W+ MIA Y +   S  A+ L  +M +  V  +     S+L 
Sbjct: 301 DLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILH 360

Query: 352 ACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
           ACA    LD G  +H  +    + S++FV NALMD+Y KCG M+ +  +F+    ++ ++
Sbjct: 361 ACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIIS 420

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
           WNTMI      GE+               P +  T + +L ACASL+ALE G ++H   +
Sbjct: 421 WNTMI------GELK--------------PDSR-TMACILPACASLSALERGKEIHGYIL 459

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
           +  Y  D  VANAL+D+Y KCG +  ARL+FDM+   + VSW  MISGY MHG   E + 
Sbjct: 460 RNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIA 519

Query: 532 VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLL 591
            F+ M+  G  P+ ++F+ +L ACS+ GLLEQG  +F  M  ++ IEP +EHY  MV LL
Sbjct: 520 TFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLL 579

Query: 592 GRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHV 651
            R G+L KA + IE +P  P   IW ALL  C I++++E+    A+ + + EPE+   +V
Sbjct: 580 SRTGNLSKAYEFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYV 639

Query: 652 LLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAG-DTSHADMNIIR 699
           LL+NIYA A  WE           K   K PG SWIE +G V+ F +G ++SH     I 
Sbjct: 640 LLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKKIE 699

Query: 700 GMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRII 759
            +L+ +  K ++ GY P     L +  E +KE  L  HSEKLA+AF L  +PP   +R+ 
Sbjct: 700 SLLKKMRRKMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLALPPRKTVRVT 759

Query: 760 KNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           KNLR+C DCH   K +SK  +REI++RD +RFHHF++G CSC  FW
Sbjct: 760 KNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKNGYCSCRGFW 805


>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 275/831 (33%), Positives = 420/831 (50%), Gaps = 131/831 (15%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           S  +S  +A  LQ+ ++  D     ++HCQ++KKG  L ++  N L+  Y K   L  A 
Sbjct: 6   SPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAH 65

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
            +FDEMP ++T S+ T I GY     F  +  L      E  + +P ++TA         
Sbjct: 66  HVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLL----YEMPDCDPVSWTAI-------- 113

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFS 231
                                           + G  +F      GLF++    A+  F+
Sbjct: 114 --------------------------------IVGYNQF------GLFDN----AIWMFA 131

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK-- 289
           +M +    P+ FT + VL +C    T+ + +  H   +K      + VA +LL++Y K  
Sbjct: 132 KMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCG 191

Query: 290 -----------------------------SGEISNARRIFEEMPKKDVIPWSFMIARYAQ 320
                                        SG+   A   FE+MP +D++ W+ MI+ Y+Q
Sbjct: 192 DPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQ 251

Query: 321 TDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVF 379
              +++A+ +F +M  +  + P+ FT  S+L ACA +E L++G QIH+ ++R    +   
Sbjct: 252 QGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGA 311

Query: 380 VSNALMDVYAKCGRME---------------------------------NSVELFAESPK 406
           V NAL+ +YAK G +E                                  + E+F +   
Sbjct: 312 VGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRD 371

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
           R+ V W  MIVGYVQ G    A+ +F  M+ E       T +++L   +SL  LE G Q+
Sbjct: 372 RDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQI 431

Query: 467 HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE-VSWNAMISGYSMHGL 525
           H   +KA       V NALI MYAK G+I  A+ VFD+ N   E VSW +MI   + HGL
Sbjct: 432 HASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGL 491

Query: 526 SAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYT 585
             E + +F+ M   G +P+++T+VGVLSAC++ GL+EQG  Y+  M   + IEP + HY 
Sbjct: 492 GKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYA 551

Query: 586 SMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPE 645
            M+ L GRAG L +A   IE +P +P  + W +LL +C IH N ++ +++A+ +L  +P 
Sbjct: 552 CMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPG 611

Query: 646 DEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHAD 694
           +   ++ L+N+Y+    WE AA            KE G+SWI  +  VH F   D  H  
Sbjct: 612 NSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQ 671

Query: 695 MNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSS 754
            + I  ++  +  + +K G+IPD  +VL D+ E+ KE+ L  HSEKLA+AF L   P ++
Sbjct: 672 KDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENT 731

Query: 755 PIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            +RI+KNLR+C DCH+AIK ISK+V REII+RD  RFHHF+DG CSC D+W
Sbjct: 732 ALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782


>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 701

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 238/604 (39%), Positives = 361/604 (59%), Gaps = 28/604 (4%)

Query: 230 FSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL----- 284
           F+ MR++   PN   F  +LKA   L   ++A S H C ++   + DLY+A AL+     
Sbjct: 98  FNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACTVRLGLDSDLYIANALINTYAK 157

Query: 285 --------DLYTKSGE--ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
                   D++ K GE  I   +++F+ MP +DV+ W+ +IA +AQ  + ++A+++   M
Sbjct: 158 FHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREM 217

Query: 335 -RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
            +   + P+ FT  S+L   A    ++ G +IH   VR G   DVF+ ++L+D+YAKC R
Sbjct: 218 GKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNR 277

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           +E S+  F   P+++ ++WN++I G VQ GE  + +  F +ML+E V    V++SSV+ A
Sbjct: 278 LECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPA 337

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
           CA L AL  G Q+H   V+  +D +  +A++L+DMYAKCG+I  AR VFD ++  + V+W
Sbjct: 338 CAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAW 397

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA 573
            A+I G +MHG + + + +F+ M + G RP  + F+ VL+ACS+ GL+++G  YF SM  
Sbjct: 398 TAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMER 457

Query: 574 NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGI-PFQPSVMIWRALLGACIIHNNVEIG 632
           ++GI P +EHY ++  LLGRAG L++A   I  +   QP+  +W  LL AC  H +VE+ 
Sbjct: 458 DFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLAACRAHKSVELA 517

Query: 633 RLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGM 681
                 +L  + E+   +VL+SNIY+ A+ W+ AA            K P  SWIE    
Sbjct: 518 EKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAARLRIHMRKKGLKKTPACSWIEVGNQ 577

Query: 682 VHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKL 741
           VH F AGD SH   + I   L+ L  +  K GY+ D + VL DV E+ K   L  HSE+L
Sbjct: 578 VHTFMAGDKSHPYYDKINKALDVLLEQMEKEGYVIDTNQVLHDVDEELKRELLHNHSERL 637

Query: 742 ALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSC 801
           A+A+ +      + IR+IKN+R+C DCHTAIK I+KIV REI +RD  RFHHF++G CSC
Sbjct: 638 AIAYGIISTTAGTTIRVIKNIRVCADCHTAIKFITKIVGREITVRDNSRFHHFKNGSCSC 697

Query: 802 GDFW 805
           GD+W
Sbjct: 698 GDYW 701



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 175/369 (47%), Gaps = 32/369 (8%)

Query: 127 TTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKL 186
           + I+ YT  S    +   F+++       N   F + LK    +   +L   + AC  +L
Sbjct: 80  SIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACTVRL 139

Query: 187 GHDSNAFVGTALI-------------DAFSVCG--CVEFARKVFDGL------------- 218
           G DS+ ++  ALI             D F   G   ++  +KVFD +             
Sbjct: 140 GLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNTVIA 199

Query: 219 ---FNDCFEEALNFFSQMRAVG-FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
               N  + EAL+   +M   G  KP++FT + +L        +   K  HG A++  ++
Sbjct: 200 GFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFD 259

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
            D+++  +L+D+Y K   +  + R F  +P+KD I W+ +IA   Q       +  F RM
Sbjct: 260 GDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRM 319

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
            +  V P   +F SV+ ACA +  L LG Q+H  +VR+G   + F++++L+D+YAKCG +
Sbjct: 320 LKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNI 379

Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
           + +  +F    KR+ V W  +I+G    G    A+ +F  MLE+ V    V + +VL AC
Sbjct: 380 KMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTAC 439

Query: 455 ASLAALEPG 463
           +    ++ G
Sbjct: 440 SHAGLVDEG 448



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 96/382 (25%), Positives = 180/382 (47%), Gaps = 35/382 (9%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNR-------L 107
           N H + + L++       + A ++H   ++ G   DL+  N L+N Y K +         
Sbjct: 109 NRHVFPSLLKASTLLKHHKLAHSLHACTVRLGLDSDLYIANALINTYAKFHNAGKVFDVF 168

Query: 108 PD--------ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFA 159
           P           K+FD MP R+ +S+ T I G+  +  +VEA+ +   + + G +L P +
Sbjct: 169 PKRGESGIDCVKKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNG-KLKPDS 227

Query: 160 FT--AFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF-- 215
           FT  + L +            +     + G D + F+G++LID ++ C  +E + + F  
Sbjct: 228 FTLSSILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYI 287

Query: 216 ---------DGLFNDC-----FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVA 261
                    + +   C     F+  L FF +M     KP   +F+ V+ AC  L  + + 
Sbjct: 288 LPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLG 347

Query: 262 KSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQT 321
           +  HGC ++  ++ + ++A +L+D+Y K G I  AR +F+ + K+D++ W+ +I   A  
Sbjct: 348 RQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMH 407

Query: 322 DLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFV 380
             ++DAV LF  M +  V P    F++VL AC+    +D G    +S+    G+   +  
Sbjct: 408 GHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEH 467

Query: 381 SNALMDVYAKCGRMENSVELFA 402
             A+ D+  + GR+E + +  +
Sbjct: 468 YAAVADLLGRAGRLEEAYDFIS 489



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 165/334 (49%), Gaps = 18/334 (5%)

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV 370
           WS +I  Y    L   +   F  MR   V PN+  F S+L+A   ++   L + +H+  V
Sbjct: 78  WSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACTV 137

Query: 371 RVGLLSDVFVSNALMDVYAK-----------CGRMENSVE----LFAESPKRNHVTWNTM 415
           R+GL SD++++NAL++ YAK             R E+ ++    +F   P R+ V+WNT+
Sbjct: 138 RLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNTV 197

Query: 416 IVGYVQLGEVGKAMIMFSKMLEE-QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
           I G+ Q G   +A+ M  +M +  ++     T SS+L   A    +  G ++H   V+  
Sbjct: 198 IAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNG 257

Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
           +D DV + ++LIDMYAKC  +  +   F ++   + +SWN++I+G   +G     L  F 
Sbjct: 258 FDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFR 317

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
            M +   +P  ++F  V+ AC++   L  G       +   G +      +S+V +  + 
Sbjct: 318 RMLKENVKPMAVSFSSVIPACAHLTALSLGRQ-LHGCIVRLGFDDNEFIASSLVDMYAKC 376

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
           G++  A  + + I  +  ++ W A++  C +H +
Sbjct: 377 GNIKMARYVFDRID-KRDMVAWTAIIMGCAMHGH 409


>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 275/831 (33%), Positives = 420/831 (50%), Gaps = 131/831 (15%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           S  +S  +A  LQ+ ++  D     ++HCQ++KKG  L ++  N L+  Y K   L  A 
Sbjct: 6   SPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAH 65

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
            +FDEMP ++T S+ T I GY     F  +  L      E  + +P ++TA         
Sbjct: 66  HVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLL----YEMPDCDPVSWTAI-------- 113

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFS 231
                                           + G  +F      GLF++    A+  F+
Sbjct: 114 --------------------------------IVGYNQF------GLFDN----AIWMFA 131

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK-- 289
           +M +    P+ FT + VL +C    T+ + +  H   +K      + VA +LL++Y K  
Sbjct: 132 KMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCG 191

Query: 290 -----------------------------SGEISNARRIFEEMPKKDVIPWSFMIARYAQ 320
                                        SG+   A   FE+MP +D++ W+ MI+ Y+Q
Sbjct: 192 DPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQ 251

Query: 321 TDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVF 379
              +++A+ +F +M  +  + P+ FT  S+L ACA +E L++G QIH+ ++R    +   
Sbjct: 252 QGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGA 311

Query: 380 VSNALMDVYAKCGRME---------------------------------NSVELFAESPK 406
           V NAL+ +YAK G +E                                  + E+F +   
Sbjct: 312 VGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRD 371

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
           R+ V W  MIVGYVQ G    A+ +F  M+ E       T +++L   +SL  LE G Q+
Sbjct: 372 RDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQI 431

Query: 467 HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE-VSWNAMISGYSMHGL 525
           H   +KA       V NALI MYAK G+I  A+ VFD+ N   E VSW +MI   + HGL
Sbjct: 432 HASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGL 491

Query: 526 SAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYT 585
             E + +F+ M   G +P+++T+VGVLSAC++ GL+EQG  Y+  M   + IEP + HY 
Sbjct: 492 GKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYA 551

Query: 586 SMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPE 645
            M+ L GRAG L +A   IE +P +P  + W +LL +C IH N ++ +++A+ +L  +P 
Sbjct: 552 CMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPG 611

Query: 646 DEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHAD 694
           +   ++ L+N+Y+    WE AA            KE G+SWI  +  VH F   D  H  
Sbjct: 612 NSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQ 671

Query: 695 MNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSS 754
            + I  ++  +  + +K G+IPD  +VL D+ E+ KE+ L  HSEKLA+AF L   P ++
Sbjct: 672 KDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENT 731

Query: 755 PIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            +RI+KNLR+C DCH+AIK ISK+V REII+RD  RFHHF+DG CSC D+W
Sbjct: 732 ALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782


>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 668

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 241/585 (41%), Positives = 351/585 (60%), Gaps = 20/585 (3%)

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR 297
            +P+   +  +LK C  L  ++  K  H   + + +  DL +  ++L +Y K G +  AR
Sbjct: 87  LEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIAR 146

Query: 298 RIFEEMPKKDVIPWSFMIARYAQTDLSIDAVE---LFCRMRQAFVAPNQFTFVSVLQACA 354
           ++F+EM  KDV+ W+ MI  Y+Q   +  A     LF  M +  + PN+F   S+++ C 
Sbjct: 147 QVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCG 206

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
            +     G QIH    + G   +VFV ++L+D+YA+CG +  S  +F E   +N V+WN 
Sbjct: 207 FLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNA 266

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
           +I G+ + GE  +A+ +F KM  E   ATE TYS++L + ++  +LE G  +H   +K+ 
Sbjct: 267 LISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSG 326

Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
             +   V N L+ MYAK G+I DA+ VFD +   + VS N+M+ GY+ HGL  E +++F+
Sbjct: 327 KKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFE 386

Query: 535 LMQQRGW---RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLL 591
            M    W    PN++TF+ VL+ACS+ GLL++G  YF+ ++  YG+EP + HYT++V L 
Sbjct: 387 EMML--WVEIEPNDITFLSVLTACSHAGLLDEGLYYFE-LMKKYGLEPKLSHYTTVVDLF 443

Query: 592 GRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHV 651
           GRAG LD+A   IE +P +P+  IW ALLGA  +H N E+G  +AQ +L+ +P     H 
Sbjct: 444 GRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHT 503

Query: 652 LLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRG 700
           LLSNIYA A  W+  A            KEP  SW+E +  VH F A D SH   N +  
Sbjct: 504 LLSNIYASAGQWKDVAKVRKEMKDSGLKKEPACSWVEIENSVHIFSANDISHPQKNKVYE 563

Query: 701 MLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIK 760
           M E LN K ++ GY+PD S V   V + EKE  L  HSEKLALAFAL    P S IRI+K
Sbjct: 564 MWENLNQKIKEIGYVPDTSHVHVFVDQQEKELNLQYHSEKLALAFALLNTKPGSVIRIMK 623

Query: 761 NLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           N+R+C DCH+AIK +S +V+REII+RD +RFHHF+DG CSC D+W
Sbjct: 624 NIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFRDGSCSCRDYW 668



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 182/379 (48%), Gaps = 21/379 (5%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           Y   L+ C     L+    +H  ++      DL   N +L +Y K   L  A ++FDEM 
Sbjct: 94  YNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMC 153

Query: 119 ERNTISFVTTIQGYT---VSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAEL 175
            ++ +++ + I GY+    +S    A+ LF  + R+G   N FA ++ +K    +G    
Sbjct: 154 VKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVD 213

Query: 176 CPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF----- 223
              +  C +K G   N FVG++L+D ++ CG +  +R VFD L       +N        
Sbjct: 214 GKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFAR 273

Query: 224 ----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
               EEAL  F +M+  GF    FT++ +L +     ++   K  H   +K+  ++  YV
Sbjct: 274 KGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYV 333

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR-QAF 338
              LL +Y KSG I +A+++F+ + K DV+  + M+  YAQ  L  +AVELF  M     
Sbjct: 334 GNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVE 393

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           + PN  TF+SVL AC+    LD G     L+ + GL   +     ++D++ + G ++ + 
Sbjct: 394 IEPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHYTTVVDLFGRAGLLDQAK 453

Query: 399 ELFAESP-KRNHVTWNTMI 416
               E P + N   W  ++
Sbjct: 454 SFIEEMPIEPNATIWGALL 472



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 182/351 (51%), Gaps = 21/351 (5%)

Query: 194 VGTALIDAFSVCGCVEFARKVFD---------------GLFNDCFEE----ALNFFSQMR 234
           +  +++  ++ CG +E AR+VFD               G   D +      AL  F +M 
Sbjct: 128 IKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMV 187

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
             G +PN F  + ++K C  L +    K  HGC  K  ++ +++V  +L+D+Y + GE+ 
Sbjct: 188 RDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELR 247

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
            +R +F+E+  K+ + W+ +I+ +A+     +A+ LF +M++      +FT+ ++L + +
Sbjct: 248 ESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSS 307

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
           T   L+ G  +H+ +++ G     +V N L+ +YAK G + ++ ++F    K + V+ N+
Sbjct: 308 TTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNS 367

Query: 415 MIVGYVQLGEVGKAMIMFSK-MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
           M++GY Q G   +A+ +F + ML  ++   ++T+ SVL AC+    L+ G+    L  K 
Sbjct: 368 MLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKKY 427

Query: 474 NYDMDVVVANALIDMYAKCGSITDAR-LVFDMMNDWNEVSWNAMISGYSMH 523
             +  +     ++D++ + G +  A+  + +M  + N   W A++    MH
Sbjct: 428 GLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMH 478



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 107/261 (40%), Gaps = 33/261 (12%)

Query: 49  FSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLP 108
           F  +EF   +Y+  L S      L+    +H  ++K G  L  +  N LL++Y K   + 
Sbjct: 292 FGATEF---TYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNIC 348

Query: 109 DATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLV 168
           DA K+FD + + + +S  + + GY       EAV LF  +     E+ P   T FL VL 
Sbjct: 349 DAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMML-WVEIEPNDIT-FLSVLT 406

Query: 169 SMGWAELCP---CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEE 225
           +   A L       F  + K G +      T ++D F   G +               ++
Sbjct: 407 ACSHAGLLDEGLYYFELMKKYGLEPKLSHYTTVVDLFGRAGLL---------------DQ 451

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA--- 282
           A +F  +M     +PN    A +  A LG   +         A +   E+D +   A   
Sbjct: 452 AKSFIEEMP---IEPN----ATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTL 504

Query: 283 LLDLYTKSGEISNARRIFEEM 303
           L ++Y  +G+  +  ++ +EM
Sbjct: 505 LSNIYASAGQWKDVAKVRKEM 525


>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g24000, mitochondrial-like [Cucumis sativus]
          Length = 677

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 234/579 (40%), Positives = 352/579 (60%), Gaps = 13/579 (2%)

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR 297
            +P    ++ +L  C  L  ++  ++ H     + +E DL +   +L++Y K G +  A+
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160

Query: 298 RIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATME 357
            +F++MP KD++ W+ +I+ Y+Q+  + +A+ LF +M      PN+FT  S+L+A  T  
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220

Query: 358 GLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIV 417
               G Q+H+  ++ G   +V V ++L+D+YA+   M  +  +F     +N V+WN +I 
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280

Query: 418 GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM 477
           G+ + GE    M +F +ML +    T  TYSSVL ACAS  +LE G  VH   +K+    
Sbjct: 281 GHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQP 339

Query: 478 DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQ 537
              + N LIDMYAK GSI DA+ VF  +   + VSWN++ISGY+ HGL AE L++F+ M 
Sbjct: 340 IAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQML 399

Query: 538 QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHL 597
           +   +PN +TF+ VL+ACS+ GLL++G+ YF+ ++  + IE  + H+ ++V LLGRAG L
Sbjct: 400 KAKVQPNEITFLSVLTACSHSGLLDEGQYYFE-LMKKHKIEAQVAHHVTVVDLLGRAGRL 458

Query: 598 DKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIY 657
           ++A K IE +P +P+  +W ALLGAC +H N+++G  +A+ I + +P D   HVLLSNIY
Sbjct: 459 NEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIY 518

Query: 658 AMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLN 706
           A A     AA            KEP  SW+E +  VH F A D SH     I+ M E ++
Sbjct: 519 ASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKIS 578

Query: 707 MKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICV 766
            K ++ GY+PD S VL  + + ++E  L  HSEKLALAFA+ K PP   IRI KN+RIC 
Sbjct: 579 GKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICG 638

Query: 767 DCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           DCH+A K  S+++ REII+RD +RFHHF  G CSC D+W
Sbjct: 639 DCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 677



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 184/375 (49%), Gaps = 18/375 (4%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           Y+  L  C     L+    IH  +       DL   N +LN+Y K   L +A  LFD+MP
Sbjct: 108 YSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMP 167

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
            ++ +S+   I GY+ S Q  EA+ LF  +   G + N F  ++ LK   +         
Sbjct: 168 TKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQ 227

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF-------- 223
           + A   K G+D N  VG++L+D ++    +  A+ +F+ L       +N           
Sbjct: 228 LHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGE 287

Query: 224 -EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
            E  +  F QM   GF+P +FT++ VL AC    ++   K  H   +K+  +   Y+   
Sbjct: 288 GEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNT 346

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+D+Y KSG I +A+++F  + K+D++ W+ +I+ YAQ  L  +A++LF +M +A V PN
Sbjct: 347 LIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPN 406

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           + TF+SVL AC+    LD G     L+ +  + + V     ++D+  + GR+  + +   
Sbjct: 407 EITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIE 466

Query: 403 ESP-KRNHVTWNTMI 416
           E P K     W  ++
Sbjct: 467 EMPIKPTAAVWGALL 481



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/256 (20%), Positives = 104/256 (40%), Gaps = 25/256 (9%)

Query: 56  SHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFD 115
           +H   +S+ +C  +  L+    +H  V+K G     +  N L+++Y K   + DA K+F 
Sbjct: 306 THFTYSSVLACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFR 365

Query: 116 EMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAEL 175
            + +++ +S+ + I GY       EA+ LF  + +   + N   F + L      G  + 
Sbjct: 366 RLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDE 425

Query: 176 CPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRA 235
               F  + K   ++       ++D     G +                EA  F  +M  
Sbjct: 426 GQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRL---------------NEANKFIEEM-- 468

Query: 236 VGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA---VALLDLYTKSGE 292
              KP    +  +L AC     + +       A +  +E+D + +   V L ++Y  +G 
Sbjct: 469 -PIKPTAAVWGALLGACRMHKNMDLGVY----AAEQIFELDPHDSGPHVLLSNIYASAGR 523

Query: 293 ISNARRIFEEMPKKDV 308
           +S+A ++ + M +  V
Sbjct: 524 LSDAAKVRKMMKESGV 539


>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 741

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/624 (38%), Positives = 362/624 (58%), Gaps = 44/624 (7%)

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           AL  +  M ++G  PN++TF F+LK+C      +  +  HG  LK  Y++DL+V  +L+ 
Sbjct: 118 ALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLIS 177

Query: 286 LYTKSGEISNARRIFE-------------------------------EMPKKDVIPWSFM 314
           +Y ++G + +AR++F+                               E+P KDV+ W+ M
Sbjct: 178 VYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAM 237

Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL 374
           I+ YA+T    +A+ELF  M +  + P++ T V+V+ ACA    ++LG Q+HS +   G 
Sbjct: 238 ISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGF 297

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
            S++ + N+LMD+Y+KCG +E +  LF     ++ ++WNT+I GY  +    +A+++F +
Sbjct: 298 GSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQE 357

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK--ANYDMDVVVANALIDMYAKC 492
           ML       +VT  S+L ACA L A++ G  +H    K   +      +  +LIDMYAKC
Sbjct: 358 MLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKC 417

Query: 493 GSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL 552
           G I  A  VF+ +   +  SWNAMI G++MHG +     +F  M++ G  P+++TFVG+L
Sbjct: 418 GDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLL 477

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
           SACS  G+L+ G   F++M  +Y I P +EHY  M+ LLG +G   +A ++I  +  +P 
Sbjct: 478 SACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPD 537

Query: 613 VMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW--------- 663
            +IW +LL AC I  NVE+G   AQ+++  EPE+   +VLLSNIYA A  W         
Sbjct: 538 GVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKIRAL 597

Query: 664 --EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAV 721
             +K   K PG S IE   +VH F  GD  H     I GMLE + +   KAG++PD S V
Sbjct: 598 LNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEV 657

Query: 722 LRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQR 781
           L+++ E+ KE  L  HSEKLA+AF L    P + + I+KNLR+C +CH A K+ISKI +R
Sbjct: 658 LQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKR 717

Query: 782 EIIIRDVHRFHHFQDGCCSCGDFW 805
           EII RD  RFHHF+DG CSC D+W
Sbjct: 718 EIIARDRTRFHHFRDGVCSCNDYW 741



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 149/310 (48%), Gaps = 39/310 (12%)

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN---SVELFAE 403
           +S+L  C T++ L L   IH+ +++ GL +  +  + L+++       +    ++ +F  
Sbjct: 37  LSLLHNCKTLQSLRL---IHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFET 93

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
             + N + WNTM  G+    +   A+ ++  M+   +     T+  +L++CA   A + G
Sbjct: 94  IQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEG 153

Query: 464 MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFD------------MMNDW--- 508
            Q+H   +K  YD+D+ V  +LI +Y + G + DAR VFD            ++  +   
Sbjct: 154 QQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASR 213

Query: 509 ----------------NEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL 552
                           + VSWNAMISGY+  G   E L++F  M +   RP+  T V V+
Sbjct: 214 GYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVV 273

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
           SAC+  G +E G     S + ++G    ++   S++ L  + G L+ A  L EG+ ++  
Sbjct: 274 SACAQSGSIELGRQ-VHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYK-D 331

Query: 613 VMIWRALLGA 622
           V+ W  L+G 
Sbjct: 332 VISWNTLIGG 341


>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 676

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 254/643 (39%), Positives = 373/643 (58%), Gaps = 30/643 (4%)

Query: 192 AFVGTALIDAFSVCGCVEFARKVFDGLFNDCF----------------EEALNFFSQMRA 235
           +F G  LID +  C  +  ARK+FD + N                   +EA+  +  M  
Sbjct: 35  SFFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYDNMLF 94

Query: 236 VGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM-DLYVAVALLDLYTKSGEIS 294
            G  P+ +TF+ + KA   +   R  + AHG A+   +E+ D +VA  ++D+Y K G++ 
Sbjct: 95  EGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMK 154

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
           +AR +F+ +  KDV+ ++ +I  Y Q  L  +A+E+F  M  + + PN++T  SVL +C 
Sbjct: 155 DARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCG 214

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
            +  L  G  IH LVV+ GL S V    +L+ +Y+KC  +E+S+++F      +HVTW +
Sbjct: 215 NLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTS 274

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
            IVG VQ G    A+ MF +M+   +     T+SS+L AC+SLA LE G Q+H +TVK  
Sbjct: 275 FIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLG 334

Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
            D +  V  ALI +Y KCG++  AR VF+ + + + VS N MI  Y+ +G   E L++F+
Sbjct: 335 VDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNGFGHEALELFE 394

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
            M++ G +PN +TF+ +L AC+N GL+E+G   F  +  N+ IE   +HYT M+ LLGRA
Sbjct: 395 RMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRA 454

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLS 654
              ++AA LIE     P V+ WR LL AC IH  VE+     + +LD  P D  TH+LL+
Sbjct: 455 KRFEEAAMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLT 513

Query: 655 NIYAMARSWE-----KAASKE------PGLSWIENQGMVHYFRAGDTSHADMNIIRGMLE 703
           NIYA A  W+     K+A ++      P +SW++    VH F AGD SH   + I  ML 
Sbjct: 514 NIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLH 573

Query: 704 WLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKM-PPSSPIRIIKNL 762
            L  K    GY PD   VL+D+ E++K   L+ HSEKLA+AFAL+K    ++ IRI KNL
Sbjct: 574 ELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNTAIRIFKNL 633

Query: 763 RICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           R+C DCH+ IK +S +  R+II RD  RFHHF+ G CSC D+W
Sbjct: 634 RVCGDCHSWIKFVSLLTGRDIIARDAKRFHHFKGGICSCKDYW 676



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/485 (26%), Positives = 237/485 (48%), Gaps = 21/485 (4%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           Y + +        L T  ++H  +LK G+    F  + L++ Y+K + + +A KLFDEMP
Sbjct: 4   YTSLIAQFTNKKSLTTLKSLHTHILKSGSLFSFFG-HKLIDGYIKCSVITEARKLFDEMP 62

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
            R+ +++ + I  +    +  EA+ L+  +  EG   + + F+A  K    MG +     
Sbjct: 63  NRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQK 122

Query: 179 VFACVYKLGHD-SNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF-------------- 223
                  LG + S+ FV T ++D ++  G ++ AR VFD + +                 
Sbjct: 123 AHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRG 182

Query: 224 --EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
              EAL  F  M     KPN +T A VL +C  L  +   K  HG  +K+  E  +    
Sbjct: 183 LDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQT 242

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           +LL +Y+K   + ++ ++F  +     + W+  I    Q      A+ +F  M +  ++P
Sbjct: 243 SLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISP 302

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           N FTF S+L AC+++  L+ G QIH++ V++G+  + +V  AL+ +Y KCG +E +  +F
Sbjct: 303 NHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVF 362

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
               + + V+ NTMI  Y Q G   +A+ +F +M +       VT+ S+L AC +   +E
Sbjct: 363 ESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVE 422

Query: 462 PGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
            G Q+  L ++ N+ +++   +   +ID+  +     +A ++ +   + + + W  +++ 
Sbjct: 423 EGCQIFSL-IRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGKNPDVIQWRTLLNA 481

Query: 520 YSMHG 524
             +HG
Sbjct: 482 CKIHG 486



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 130/313 (41%), Gaps = 37/313 (11%)

Query: 26  RGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKK 85
           RGL  +A    +    S   P        N ++ A+ L SC    DL     IH  V+K 
Sbjct: 181 RGLDGEALEVFEDMVGSRIKP--------NEYTLASVLVSCGNLGDLVNGKLIHGLVVKS 232

Query: 86  GNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLF 145
           G    + +   LL +Y K N + D+ K+F+ +   + +++ + I G   + +   A+ +F
Sbjct: 233 GLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMF 292

Query: 146 STLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVC 205
             + R     N F F++ L    S+   E    + A   KLG D N +V  ALI  +  C
Sbjct: 293 REMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKC 352

Query: 206 GCVEFARKVFDGLF----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVL 249
           G VE AR VF+ L                 N    EAL  F +M+ +G KPN  TF  +L
Sbjct: 353 GNVEKARSVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISIL 412

Query: 250 KAC-------LGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEE 302
            AC        G     + ++ H   L      D Y    ++DL  ++     A  + EE
Sbjct: 413 LACNNAGLVEEGCQIFSLIRNNHSIELTR----DHY--TCMIDLLGRAKRFEEAAMLIEE 466

Query: 303 MPKKDVIPWSFMI 315
               DVI W  ++
Sbjct: 467 GKNPDVIQWRTLL 479


>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
 gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
 gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
 gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 781

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 273/778 (35%), Positives = 416/778 (53%), Gaps = 59/778 (7%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N HS   + Q+ IQ    QT   + C     G+  D+   NV ++ Y++  R  +A ++F
Sbjct: 36  NFHSLKRATQTQIQKS--QTKPLLKC-----GDS-DIKEWNVAISSYMRTGRCNEALRVF 87

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLV---SMG 171
             MP  +++S+   I GY  + +F  A  LF  +     E +  ++   +K  V   ++G
Sbjct: 88  KRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP----ERDLVSWNVMIKGYVRNRNLG 143

Query: 172 WA----ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL--FNDCFEE 225
            A    E+ P    C +             ++  ++  GCV+ AR VFD +   ND    
Sbjct: 144 KARELFEIMPERDVCSW-----------NTMLSGYAQNGCVDDARSVFDRMPEKNDVSWN 192

Query: 226 AL------NFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM-DLY 278
           AL      N   +   + FK     +A V   CL    ++  K            + D+ 
Sbjct: 193 ALLSAYVQNSKMEEACMLFKSRE-NWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVV 251

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
               ++  Y +SG+I  AR++F+E P +DV  W+ M++ Y Q  +  +A ELF +M +  
Sbjct: 252 SWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER- 310

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
              N+ ++ ++L      E +++  ++  ++       +V   N ++  YA+CG++  + 
Sbjct: 311 ---NEVSWNAMLAGYVQGERMEMAKELFDVMP----CRNVSTWNTMITGYAQCGKISEAK 363

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            LF + PKR+ V+W  MI GY Q G   +A+ +F +M  E       ++SS L  CA + 
Sbjct: 364 NLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVV 423

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           ALE G Q+H   VK  Y+    V NAL+ MY KCGSI +A  +F  M   + VSWN MI+
Sbjct: 424 ALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIA 483

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           GYS HG     L+ F+ M++ G +P++ T V VLSACS+ GL+++G  YF +M  +YG+ 
Sbjct: 484 GYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVM 543

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P  +HY  MV LLGRAG L+ A  L++ +PF+P   IW  LLGA  +H N E+   +A  
Sbjct: 544 PNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADK 603

Query: 639 ILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRA 687
           I   EPE+   +VLLSN+YA +  W           +K   K PG SWIE Q   H F  
Sbjct: 604 IFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSV 663

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFAL 747
           GD  H + + I   LE L+++ +KAGY+   S VL DV E+EKER +  HSE+LA+A+ +
Sbjct: 664 GDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGI 723

Query: 748 FKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            ++    PIR+IKNLR+C DCH AIK +++I  R II+RD +RFHHF+DG CSCGD+W
Sbjct: 724 MRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 137/555 (24%), Positives = 256/555 (46%), Gaps = 73/555 (13%)

Query: 19  SKINAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTI 78
           S I  W   ++  + + T +C+ +    +   +  ++S SY   +   ++N + + A  +
Sbjct: 62  SDIKEW--NVAISSYMRTGRCNEALR--VFKRMPRWSSVSYNGMISGYLRNGEFELARKL 117

Query: 79  HCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQF 138
             ++ ++    DL + NV++  YV+   L  A +LF+ MPER+  S+ T + GY  +   
Sbjct: 118 FDEMPER----DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCV 173

Query: 139 VEAVGLFSTLHREGHELNPFAFTAFLKVLVS--------------MGWAELC-PCVFACV 183
            +A  +F  +     E N  ++ A L   V                 WA +   C+    
Sbjct: 174 DDARSVFDRM----PEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGF 229

Query: 184 YKLGH--DSNAFVGT----------ALIDAFSVCGCVEFARKVFDG-------------- 217
            K     ++  F  +           +I  ++  G ++ AR++FD               
Sbjct: 230 VKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVS 289

Query: 218 --LFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
             + N   EEA   F +M     + N  ++  +L   +  + + +AK      +  C  +
Sbjct: 290 GYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFD--VMPCRNV 343

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
             +    ++  Y + G+IS A+ +F++MPK+D + W+ MIA Y+Q+  S +A+ LF +M 
Sbjct: 344 STW--NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQME 401

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
           +     N+ +F S L  CA +  L+LG Q+H  +V+ G  +  FV NAL+ +Y KCG +E
Sbjct: 402 REGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIE 461

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
            + +LF E   ++ V+WNTMI GY + G    A+  F  M  E +   + T  +VL AC+
Sbjct: 462 EANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACS 521

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANA-----LIDMYAKCGSITDAR-LVFDMMNDWN 509
               ++ G Q +  T+  +Y    V+ N+     ++D+  + G + DA  L+ +M  + +
Sbjct: 522 HTGLVDKGRQ-YFYTMTQDYG---VMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPD 577

Query: 510 EVSWNAMISGYSMHG 524
              W  ++    +HG
Sbjct: 578 AAIWGTLLGASRVHG 592


>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
 gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
          Length = 890

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 262/706 (37%), Positives = 385/706 (54%), Gaps = 87/706 (12%)

Query: 187 GHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEE-------------------AL 227
           G +SN F+  AL+  +S CG +E A  +FD +     ++                   AL
Sbjct: 185 GFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTAL 244

Query: 228 NFFSQMR-AVGFKPNN-----FTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
           + FS+M   V  KP N      +   +L AC  L  +   K  HG A++     D++V  
Sbjct: 245 DLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGN 304

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ----- 336
           AL+D Y K G + NA ++F  M  KDV+ W+ M+A Y+Q+     A ELF  MR+     
Sbjct: 305 ALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPL 364

Query: 337 ------AFVA------------------------PNQFTFVSVLQACATMEGLDLGNQIH 366
                 A +A                        PN  T +SVL ACA++     G +IH
Sbjct: 365 DVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIH 424

Query: 367 SLVVRVGLLS----------DVFVSNALMDVYAKCGRMENSVELFAESP--KRNHVTWNT 414
           +  ++  LL+          D+ V NAL+D+Y+KC   + +  +F + P  +RN VTW  
Sbjct: 425 AYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTV 484

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQ--VPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
           MI G+ Q G+   A+ +F +M+ E   V     T S +L ACA LAA+  G Q+H   ++
Sbjct: 485 MIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR 544

Query: 473 AN-YDMDV-VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVL 530
            + Y+     VAN LIDMY+KCG +  AR VFD M+  + +SW +M++GY MHG  +E L
Sbjct: 545 HHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEAL 604

Query: 531 KVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSL 590
            +FD M++ G+ P+++TF+ VL ACS+ G+++QG +YF SM A+YG+ P  EHY   + L
Sbjct: 605 DIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDL 664

Query: 591 LGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATH 650
           L R+G LDKA + ++ +P +P+ ++W ALL AC +H+NVE+   +   +++   E++ ++
Sbjct: 665 LARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSY 724

Query: 651 VLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIR 699
            L+SNIYA A  W+  A            K PG SW++ Q     F  GD SH     I 
Sbjct: 725 TLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIY 784

Query: 700 GMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRII 759
            +LE L  + +  GY+P+ +  L DV E+EK   L  HSEKLALA+ L    P  PIRI 
Sbjct: 785 ALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPIRIT 844

Query: 760 KNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           KNLR+C DCH+A   ISKIV  EI++RD  RFHHF++G CSCG +W
Sbjct: 845 KNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 890



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 136/509 (26%), Positives = 243/509 (47%), Gaps = 76/509 (14%)

Query: 194 VGTALIDAFSVCGCVEFARKVFD----------------GLFNDCFEEALNFFSQMRAVG 237
           +GT ++ ++  CG  ++A  V +                 +     + A+N   +M   G
Sbjct: 91  LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 150

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR 297
            +P++FT   VLKAC  L + R   + HG      +E ++++  AL+ +Y++ G +  A 
Sbjct: 151 TRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 210

Query: 298 RIFEEMPKK---DVIPWSFMIARYAQTDLSIDAVELFCRM------RQAFVAPNQFTFVS 348
            IF+E+ ++   DVI W+ +++ + ++  +  A++LF +M      +      +  + V+
Sbjct: 211 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 270

Query: 349 VLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRN 408
           +L AC +++ +    ++H   +R G   DVFV NAL+D YAKCG MEN+V++F     ++
Sbjct: 271 ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 330

Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYS-------------------- 448
            V+WN M+ GY Q G    A  +F  M +E +P   VT++                    
Sbjct: 331 VVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFR 390

Query: 449 ---------------SVLRACASLAALEPGMQVHCLTVK----------ANYDMDVVVAN 483
                          SVL ACASL A   G ++H  ++K             D D++V N
Sbjct: 391 QMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYN 450

Query: 484 ALIDMYAKCGSITDARLVFD--MMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLM--QQR 539
           ALIDMY+KC S   AR +FD   + + N V+W  MI G++ +G S + LK+F  M  +  
Sbjct: 451 ALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPY 510

Query: 540 GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTS-MVSLLGRAGHLD 598
           G  PN  T   +L AC++   +  G+     ++ ++  E       + ++ +  + G +D
Sbjct: 511 GVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVD 570

Query: 599 KAAKLIEGIPFQPSVMIWRALLGACIIHN 627
            A  + + +  Q S + W +++    +H 
Sbjct: 571 TARHVFDSMS-QKSAISWTSMMTGYGMHG 598



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 132/480 (27%), Positives = 218/480 (45%), Gaps = 70/480 (14%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L +C     +     +H   ++ G   D+F  N L++ Y K   + +A K+F+ M  ++ 
Sbjct: 272 LPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDV 331

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +S+   + GY+ S  F  A  LF  + +E   L+   +                      
Sbjct: 332 VSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTW---------------------- 369

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNN 242
                        TA+I  +S  GC                 EALN F QM   G  PN 
Sbjct: 370 -------------TAVIAGYSQRGCS---------------HEALNLFRQMIFSGSLPNC 401

Query: 243 FTFAFVLKACLGLDTIRVAKSAHGCALKTCY----------EMDLYVAVALLDLYTKSGE 292
            T   VL AC  L         H  +LK C           + DL V  AL+D+Y+K   
Sbjct: 402 VTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRS 461

Query: 293 ISNARRIFEEMP--KKDVIPWSFMIARYAQTDLSIDAVELFCRM--RQAFVAPNQFTFVS 348
              AR IF+++P  +++V+ W+ MI  +AQ   S DA++LF  M      VAPN +T   
Sbjct: 462 FKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISC 521

Query: 349 VLQACATMEGLDLGNQIHSLVVRVGLL--SDVFVSNALMDVYAKCGRMENSVELFAESPK 406
           +L ACA +  + +G QIH+ V+R      S  FV+N L+D+Y+KCG ++ +  +F    +
Sbjct: 522 ILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQ 581

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
           ++ ++W +M+ GY   G   +A+ +F KM +      ++T+  VL AC+    ++ G+  
Sbjct: 582 KSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLS- 640

Query: 467 HCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
           +  ++ A+Y +     +    ID+ A+ G +  A R V DM  +   V W A++S   +H
Sbjct: 641 YFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVH 700


>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
          Length = 897

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 262/706 (37%), Positives = 385/706 (54%), Gaps = 87/706 (12%)

Query: 187 GHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEE-------------------AL 227
           G +SN F+  AL+  +S CG +E A  +FD +     ++                   AL
Sbjct: 192 GFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTAL 251

Query: 228 NFFSQMR-AVGFKPNN-----FTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
           + FS+M   V  KP N      +   +L AC  L  +   K  HG A++     D++V  
Sbjct: 252 DLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGN 311

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ----- 336
           AL+D Y K G + NA ++F  M  KDV+ W+ M+A Y+Q+     A ELF  MR+     
Sbjct: 312 ALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPL 371

Query: 337 ------AFVA------------------------PNQFTFVSVLQACATMEGLDLGNQIH 366
                 A +A                        PN  T +SVL ACA++     G +IH
Sbjct: 372 DVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIH 431

Query: 367 SLVVRVGLLS----------DVFVSNALMDVYAKCGRMENSVELFAESP--KRNHVTWNT 414
           +  ++  LL+          D+ V NAL+D+Y+KC   + +  +F + P  +RN VTW  
Sbjct: 432 AYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTV 491

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQ--VPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
           MI G+ Q G+   A+ +F +M+ E   V     T S +L ACA LAA+  G Q+H   ++
Sbjct: 492 MIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR 551

Query: 473 AN-YDMDV-VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVL 530
            + Y+     VAN LIDMY+KCG +  AR VFD M+  + +SW +M++GY MHG  +E L
Sbjct: 552 HHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEAL 611

Query: 531 KVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSL 590
            +FD M++ G+ P+++TF+ VL ACS+ G+++QG +YF SM A+YG+ P  EHY   + L
Sbjct: 612 DIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDL 671

Query: 591 LGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATH 650
           L R+G LDKA + ++ +P +P+ ++W ALL AC +H+NVE+   +   +++   E++ ++
Sbjct: 672 LARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSY 731

Query: 651 VLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIR 699
            L+SNIYA A  W+  A            K PG SW++ Q     F  GD SH     I 
Sbjct: 732 TLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIY 791

Query: 700 GMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRII 759
            +LE L  + +  GY+P+ +  L DV E+EK   L  HSEKLALA+ L    P  PIRI 
Sbjct: 792 ALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPIRIT 851

Query: 760 KNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           KNLR+C DCH+A   ISKIV  EI++RD  RFHHF++G CSCG +W
Sbjct: 852 KNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 897



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 138/509 (27%), Positives = 245/509 (48%), Gaps = 76/509 (14%)

Query: 194 VGTALIDAFSVCGCVEFARKVFDGL-------FNDCFEE---------ALNFFSQMRAVG 237
           +GT ++ ++  CG  ++A  V + +       +N    E         A+N   +M   G
Sbjct: 98  LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 157

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR 297
            +P++FT   VLKAC  L + R   + HG      +E ++++  AL+ +Y++ G +  A 
Sbjct: 158 TRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 217

Query: 298 RIFEEMPKK---DVIPWSFMIARYAQTDLSIDAVELFCRM------RQAFVAPNQFTFVS 348
            IF+E+ ++   DVI W+ +++ + ++  +  A++LF +M      +      +  + V+
Sbjct: 218 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 277

Query: 349 VLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRN 408
           +L AC +++ +    ++H   +R G   DVFV NAL+D YAKCG MEN+V++F     ++
Sbjct: 278 ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 337

Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYS-------------------- 448
            V+WN M+ GY Q G    A  +F  M +E +P   VT++                    
Sbjct: 338 VVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFR 397

Query: 449 ---------------SVLRACASLAALEPGMQVHCLTVK----------ANYDMDVVVAN 483
                          SVL ACASL A   G ++H  ++K             D D++V N
Sbjct: 398 QMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYN 457

Query: 484 ALIDMYAKCGSITDARLVFD--MMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLM--QQR 539
           ALIDMY+KC S   AR +FD   + + N V+W  MI G++ +G S + LK+F  M  +  
Sbjct: 458 ALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPY 517

Query: 540 GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTS-MVSLLGRAGHLD 598
           G  PN  T   +L AC++   +  G+     ++ ++  E       + ++ +  + G +D
Sbjct: 518 GVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVD 577

Query: 599 KAAKLIEGIPFQPSVMIWRALLGACIIHN 627
            A  + + +  Q S + W +++    +H 
Sbjct: 578 TARHVFDSMS-QKSAISWTSMMTGYGMHG 605



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 132/480 (27%), Positives = 218/480 (45%), Gaps = 70/480 (14%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L +C     +     +H   ++ G   D+F  N L++ Y K   + +A K+F+ M  ++ 
Sbjct: 279 LPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDV 338

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +S+   + GY+ S  F  A  LF  + +E   L+   +                      
Sbjct: 339 VSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTW---------------------- 376

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNN 242
                        TA+I  +S  GC                 EALN F QM   G  PN 
Sbjct: 377 -------------TAVIAGYSQRGCS---------------HEALNLFRQMIFSGSLPNC 408

Query: 243 FTFAFVLKACLGLDTIRVAKSAHGCALKTCY----------EMDLYVAVALLDLYTKSGE 292
            T   VL AC  L         H  +LK C           + DL V  AL+D+Y+K   
Sbjct: 409 VTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRS 468

Query: 293 ISNARRIFEEMP--KKDVIPWSFMIARYAQTDLSIDAVELFCRM--RQAFVAPNQFTFVS 348
              AR IF+++P  +++V+ W+ MI  +AQ   S DA++LF  M      VAPN +T   
Sbjct: 469 FKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISC 528

Query: 349 VLQACATMEGLDLGNQIHSLVVRVGLL--SDVFVSNALMDVYAKCGRMENSVELFAESPK 406
           +L ACA +  + +G QIH+ V+R      S  FV+N L+D+Y+KCG ++ +  +F    +
Sbjct: 529 ILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQ 588

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
           ++ ++W +M+ GY   G   +A+ +F KM +      ++T+  VL AC+    ++ G+  
Sbjct: 589 KSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLS- 647

Query: 467 HCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
           +  ++ A+Y +     +    ID+ A+ G +  A R V DM  +   V W A++S   +H
Sbjct: 648 YFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVH 707


>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
 gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
          Length = 852

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 271/764 (35%), Positives = 402/764 (52%), Gaps = 87/764 (11%)

Query: 129 IQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGH 188
           I+ +    +   A+ +   + R G  L+ F     LK    +            +   G 
Sbjct: 89  IREHIKQGRLDSAINVSCRMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGF 148

Query: 189 DSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEE-------------------ALNF 229
           +SN F+  AL+  +S CG +E A  +FD +     ++                   AL+ 
Sbjct: 149 ESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDL 208

Query: 230 FSQMR-AVGFKPNN-----FTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
           FS+M   V  KP N      +   +L AC  L  +   K  HG A++    +D++V  AL
Sbjct: 209 FSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNAL 268

Query: 284 LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ------- 336
           +D Y K G + NA ++F  M  KDV+ W+ M+A Y+Q+     A ELF  MR+       
Sbjct: 269 IDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDM 328

Query: 337 ----AFVA------------------------PNQFTFVSVLQACATMEGLDLGNQIHSL 368
               A +A                        PN  T +SVL ACA++     G +IH+ 
Sbjct: 329 VTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAY 388

Query: 369 VVRVGLLS----------DVFVSNALMDVYAKCGRMENSVELFAESP--KRNHVTWNTMI 416
            ++  LL+          D+ V NAL+D+Y+KC   + +  +F + P  +RN VTW  MI
Sbjct: 389 SLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMI 448

Query: 417 VGYVQLGEVGKAMIMFSKMLEEQ--VPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
            G+ Q G+   A+ +F +M+ E   V     T S +L ACA LAA+  G Q+H   ++ +
Sbjct: 449 GGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHH 508

Query: 475 -YDMDV-VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
            YD     VAN LI+MY+KCG +  AR VFD M+  + +SW +M++GY MHG  +E L +
Sbjct: 509 QYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDI 568

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
           FD M++ G+ P+++TF+ VL ACS+ G+++QG +YF SM A+YG+ P  EHY   + LL 
Sbjct: 569 FDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLA 628

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVL 652
           R G LDKA K ++ +P +P+ ++W ALL AC +H+NVE+   +   +++   E++ ++ L
Sbjct: 629 RFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTL 688

Query: 653 LSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGM 701
           +SNIYA A  W+  A            K PG SW++ Q     F  GD SH     I  +
Sbjct: 689 ISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYAL 748

Query: 702 LEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKN 761
           LE L  + +  GY+P+ +  L DV E+EK   L  HSEKLALA+ L    P  PIRI KN
Sbjct: 749 LESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRITKN 808

Query: 762 LRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           LR+C DCH+A   ISKIV  EI++RD  RFHHF++G CSCG +W
Sbjct: 809 LRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 852



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 146/535 (27%), Positives = 256/535 (47%), Gaps = 88/535 (16%)

Query: 194 VGTALIDAFSVCGCVEFARKVFDGL-------FNDCFEE---------ALNFFSQMRAVG 237
           +GT ++ ++  CG  ++A  V + +       +N    E         A+N   +M   G
Sbjct: 53  LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 112

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR 297
            + ++FT   VLKAC  L + R   + HG      +E ++++  AL+ +Y++ G +  A 
Sbjct: 113 TRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 172

Query: 298 RIFEEMPKK---DVIPWSFMIARYAQTDLSIDAVELFCRM------RQAFVAPNQFTFVS 348
            IF+E+ ++   DVI W+ +++ + ++  +  A++LF +M      +      +  + V+
Sbjct: 173 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 232

Query: 349 VLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRN 408
           +L AC +++ +    ++H   +R G   DVFV NAL+D YAKCG MEN+V++F     ++
Sbjct: 233 ILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 292

Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYS-------------------- 448
            V+WN M+ GY Q G    A  +F  M +E +P   VT++                    
Sbjct: 293 VVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFR 352

Query: 449 ---------------SVLRACASLAALEPGMQVHCLTVK----------ANYDMDVVVAN 483
                          SVL ACASL A   GM++H  ++K             D D++V N
Sbjct: 353 QMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYN 412

Query: 484 ALIDMYAKCGSITDARLVFD--MMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLM--QQR 539
           ALIDMY+KC S   AR +FD   + + N V+W  MI G++ +G S + LK+F  M  +  
Sbjct: 413 ALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPY 472

Query: 540 GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTS-MVSLLGRAGHLD 598
           G  PN  T   +L AC++   +  G+     ++ ++  +       + ++++  + G +D
Sbjct: 473 GVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVD 532

Query: 599 KAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS-AQHILD------FEPED 646
            A  + + +  Q S + W +++    +H     GR S A  I D      F P+D
Sbjct: 533 TARHVFDSMS-QKSAISWTSMMTGYGMH-----GRGSEALDIFDKMRKAGFVPDD 581



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 131/480 (27%), Positives = 219/480 (45%), Gaps = 70/480 (14%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L +C     +     +H   ++ G  LD+F  N L++ Y K   + +A K+F+ M  ++ 
Sbjct: 234 LPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDV 293

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +S+   + GY+ S  F  A  LF  + +E   L+   +                      
Sbjct: 294 VSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTW---------------------- 331

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNN 242
                        TA+I  +S  GC                 EALN F QM   G  PN 
Sbjct: 332 -------------TAVIAGYSQRGCS---------------HEALNVFRQMIFSGSLPNC 363

Query: 243 FTFAFVLKACLGLDTIRVAKSAHGCALKTCY----------EMDLYVAVALLDLYTKSGE 292
            T   VL AC  L         H  +LK C           + DL V  AL+D+Y+K   
Sbjct: 364 VTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRS 423

Query: 293 ISNARRIFEEMP--KKDVIPWSFMIARYAQTDLSIDAVELFCRM--RQAFVAPNQFTFVS 348
              AR IF+++P  +++V+ W+ MI  +AQ   S DA++LF  M      VAPN +T   
Sbjct: 424 FKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISC 483

Query: 349 VLQACATMEGLDLGNQIHSLVVRVGLL--SDVFVSNALMDVYAKCGRMENSVELFAESPK 406
           +L ACA +  + +G QIH+ V+R      S  FV+N L+++Y+KCG ++ +  +F    +
Sbjct: 484 ILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQ 543

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
           ++ ++W +M+ GY   G   +A+ +F KM +      ++T+  VL AC+    ++ G+  
Sbjct: 544 KSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLS- 602

Query: 467 HCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
           +  ++ A+Y +     +    ID+ A+ G +  A + V DM  +   V W A++S   +H
Sbjct: 603 YFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVH 662



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 135/531 (25%), Positives = 222/531 (41%), Gaps = 111/531 (20%)

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y   G    A  + E +     + W+ +I  + +      A+ + CRM +A    + FT 
Sbjct: 61  YLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRLDHFTL 120

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
             VL+AC  +     G+  H L+   G  S+VF+ NAL+ +Y++CG +E +  +F E  +
Sbjct: 121 PHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQ 180

Query: 407 R---NHVTWNTMIVGYVQLGEVGKAMIMFSKM--LEEQVPATE----VTYSSVLRACASL 457
           R   + ++WN+++  +V+      A+ +FSKM  +  + P  E    ++  ++L AC SL
Sbjct: 181 RGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSL 240

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM- 516
            A+    +VH   ++    +DV V NALID YAKCG + +A  VF+MM   + VSWNAM 
Sbjct: 241 KAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMV 300

Query: 517 ----------------------------------ISGYSMHGLSAEVLKVFDLMQQRGWR 542
                                             I+GYS  G S E L VF  M   G  
Sbjct: 301 AGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSL 360

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN---------YGIEPCIEHYTSMVSLLGR 593
           PN +T + VLSAC++ G   QG       + N          G +  +  Y +++ +  +
Sbjct: 361 PNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSK 420

Query: 594 AGHLDKAAKLIEGIPFQP-SVMIWRALLG------------------------------- 621
                 A  + + IP +  +V+ W  ++G                               
Sbjct: 421 CRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYT 480

Query: 622 ------ACIIHNNVEIGRLSAQHILDFEPEDEATHVL---LSNIYA------MARSWEKA 666
                 AC     + IG+    ++L     D + + +   L N+Y+       AR    +
Sbjct: 481 ISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDS 540

Query: 667 ASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPD 717
            S++  +SW     M  Y   G  S A ++I   M        RKAG++PD
Sbjct: 541 MSQKSAISW--TSMMTGYGMHGRGSEA-LDIFDKM--------RKAGFVPD 580


>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
          Length = 745

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 269/743 (36%), Positives = 394/743 (53%), Gaps = 87/743 (11%)

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
           R G  L+ F     LK    +            +   G +SN F+  AL+  +S CG +E
Sbjct: 3   RAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLE 62

Query: 210 FARKVFDGLFNDCFEE-------------------ALNFFSQMR-AVGFKPNN-----FT 244
            A  +FD +     ++                   AL+ FS+M   V  KP N      +
Sbjct: 63  EASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIIS 122

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
              +L AC  L  +   K  HG A++    +D++V  AL+D Y K G + NA ++F  M 
Sbjct: 123 IVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMME 182

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ-----------AFVA------------- 340
            KDV+ W+ M+A Y+Q+     A ELF  MR+           A +A             
Sbjct: 183 FKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALN 242

Query: 341 -----------PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLS----------DVF 379
                      PN  T +SVL ACA++     G +IH+  ++  LL+          D+ 
Sbjct: 243 VFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLM 302

Query: 380 VSNALMDVYAKCGRMENSVELFAESP--KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
           V NAL+D+Y+KC   + +  +F + P  +RN VTW  MI G+ Q G+   A+ +F +M+ 
Sbjct: 303 VYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMIS 362

Query: 438 EQ--VPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN-YDMDV-VVANALIDMYAKCG 493
           E   V     T S +L ACA LAA+  G Q+H   ++ + YD     VAN LI+MY+KCG
Sbjct: 363 EPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCG 422

Query: 494 SITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLS 553
            +  AR VFD M+  + +SW +M++GY MHG  +E L +FD M++ G+ P+++TF+ VL 
Sbjct: 423 DVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLY 482

Query: 554 ACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSV 613
           ACS+ G+++QG +YF SM A+YG+ P  EHY   + LL R G LDKA K ++ +P +P+ 
Sbjct: 483 ACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTA 542

Query: 614 MIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA------ 667
           ++W ALL AC +H+NVE+   +   +++   E++ ++ L+SNIYA A  W+  A      
Sbjct: 543 VVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLM 602

Query: 668 -----SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVL 722
                 K PG SW++ Q     F  GD SH     I  +LE L  + +  GY+P+ +  L
Sbjct: 603 KKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFAL 662

Query: 723 RDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQRE 782
            DV E+EK   L  HSEKLALA+ L    P  PIRI KNLR+C DCH+A   ISKIV  E
Sbjct: 663 HDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIVDHE 722

Query: 783 IIIRDVHRFHHFQDGCCSCGDFW 805
           I++RD  RFHHF++G CSCG +W
Sbjct: 723 IVVRDPSRFHHFKNGSCSCGGYW 745



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 136/480 (28%), Positives = 234/480 (48%), Gaps = 72/480 (15%)

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           M   G + ++FT   VLKAC  L + R   + HG      +E ++++  AL+ +Y++ G 
Sbjct: 1   MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60

Query: 293 ISNARRIFEEMPKK---DVIPWSFMIARYAQTDLSIDAVELFCRM------RQAFVAPNQ 343
           +  A  IF+E+ ++   DVI W+ +++ + ++  +  A++LF +M      +      + 
Sbjct: 61  LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
            + V++L AC +++ +    ++H   +R G   DVFV NAL+D YAKCG MEN+V++F  
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 180

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYS--------------- 448
              ++ V+WN M+ GY Q G    A  +F  M +E +P   VT++               
Sbjct: 181 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEA 240

Query: 449 --------------------SVLRACASLAALEPGMQVHCLTVK----------ANYDMD 478
                               SVL ACASL A   GM++H  ++K             D D
Sbjct: 241 LNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDED 300

Query: 479 VVVANALIDMYAKCGSITDARLVFD--MMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLM 536
           ++V NALIDMY+KC S   AR +FD   + + N V+W  MI G++ +G S + LK+F  M
Sbjct: 301 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEM 360

Query: 537 --QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTS-MVSLLGR 593
             +  G  PN  T   +L AC++   +  G+     ++ ++  +       + ++++  +
Sbjct: 361 ISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSK 420

Query: 594 AGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS-AQHILD------FEPED 646
            G +D A  + + +  Q S + W +++    +H     GR S A  I D      F P+D
Sbjct: 421 CGDVDTARHVFDSMS-QKSAISWTSMMTGYGMH-----GRGSEALDIFDKMRKAGFVPDD 474



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 131/480 (27%), Positives = 219/480 (45%), Gaps = 70/480 (14%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L +C     +     +H   ++ G  LD+F  N L++ Y K   + +A K+F+ M  ++ 
Sbjct: 127 LPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDV 186

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +S+   + GY+ S  F  A  LF  + +E   L+   +                      
Sbjct: 187 VSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTW---------------------- 224

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNN 242
                        TA+I  +S  GC                 EALN F QM   G  PN 
Sbjct: 225 -------------TAVIAGYSQRGCS---------------HEALNVFRQMIFSGSLPNC 256

Query: 243 FTFAFVLKACLGLDTIRVAKSAHGCALKTCY----------EMDLYVAVALLDLYTKSGE 292
            T   VL AC  L         H  +LK C           + DL V  AL+D+Y+K   
Sbjct: 257 VTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRS 316

Query: 293 ISNARRIFEEMP--KKDVIPWSFMIARYAQTDLSIDAVELFCRM--RQAFVAPNQFTFVS 348
              AR IF+++P  +++V+ W+ MI  +AQ   S DA++LF  M      VAPN +T   
Sbjct: 317 FKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISC 376

Query: 349 VLQACATMEGLDLGNQIHSLVVRVGLL--SDVFVSNALMDVYAKCGRMENSVELFAESPK 406
           +L ACA +  + +G QIH+ V+R      S  FV+N L+++Y+KCG ++ +  +F    +
Sbjct: 377 ILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQ 436

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
           ++ ++W +M+ GY   G   +A+ +F KM +      ++T+  VL AC+    ++ G+  
Sbjct: 437 KSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLS- 495

Query: 467 HCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
           +  ++ A+Y +     +    ID+ A+ G +  A + V DM  +   V W A++S   +H
Sbjct: 496 YFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVH 555



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 128/484 (26%), Positives = 208/484 (42%), Gaps = 111/484 (22%)

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           M +A    + FT   VL+AC  +     G+  H L+   G  S+VF+ NAL+ +Y++CG 
Sbjct: 1   MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60

Query: 394 MENSVELFAESPKR---NHVTWNTMIVGYVQLGEVGKAMIMFSKM--LEEQVPATE---- 444
           +E +  +F E  +R   + ++WN+++  +V+      A+ +FSKM  +  + P  E    
Sbjct: 61  LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120

Query: 445 VTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDM 504
           ++  ++L AC SL A+    +VH   ++    +DV V NALID YAKCG + +A  VF+M
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 180

Query: 505 MNDWNEVSWNAM-----------------------------------ISGYSMHGLSAEV 529
           M   + VSWNAM                                   I+GYS  G S E 
Sbjct: 181 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEA 240

Query: 530 LKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG---EAY-----FKSMVANYGIE-PC 580
           L VF  M   G  PN +T + VLSAC++ G   QG    AY       ++  ++G E   
Sbjct: 241 LNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDED 300

Query: 581 IEHYTSMVSLLGRAGHLDKAAKLIEGIPFQP-SVMIWRALLG------------------ 621
           +  Y +++ +  +      A  + + IP +  +V+ W  ++G                  
Sbjct: 301 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEM 360

Query: 622 -------------------ACIIHNNVEIGRLSAQHILDFEPEDEATHVL---LSNIYA- 658
                              AC     + IG+    ++L     D + + +   L N+Y+ 
Sbjct: 361 ISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSK 420

Query: 659 -----MARSWEKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAG 713
                 AR    + S++  +SW     M  Y   G  S A ++I   M        RKAG
Sbjct: 421 CGDVDTARHVFDSMSQKSAISW--TSMMTGYGMHGRGSEA-LDIFDKM--------RKAG 469

Query: 714 YIPD 717
           ++PD
Sbjct: 470 FVPD 473


>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
          Length = 695

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 250/628 (39%), Positives = 366/628 (58%), Gaps = 52/628 (8%)

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           AL  +  M ++G  PN +TF F+LK+C      R  +  HG  LK  Y++DLYV  +L+ 
Sbjct: 72  ALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLIS 131

Query: 286 LYTKSGEISNARRIFE-------------------------------EMPKKDVIPWSFM 314
           +Y ++G + +AR++F+                               E+P KDV+ W+ M
Sbjct: 132 MYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAM 191

Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL 374
           I+ YA+T  + +A+ELF  M +  V P++ T VSV+ ACA    ++LG Q+HS +   G 
Sbjct: 192 ISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGF 251

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
            S++ + NAL+D+Y KCG +E +  LF     ++ ++WNT+I GY  +    +A+++F +
Sbjct: 252 GSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQE 311

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA------LIDM 488
           ML       +VT  S+L ACA L A+E G  +H    K        VANA      LIDM
Sbjct: 312 MLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKG----VANASSHRTSLIDM 367

Query: 489 YAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTF 548
           YAKCG I  A+ VFD + + +  SWNAMI G++MHG +     +F  M++    P+++TF
Sbjct: 368 YAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITF 427

Query: 549 VGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIP 608
           VG+LSACS+ G+L+ G   F+SM  +Y I P +EHY  M+ LLG +G   +A ++I  + 
Sbjct: 428 VGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTME 487

Query: 609 FQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW----- 663
            +P  +IW +LL AC +H NVE+G   AQ+++  EP++  ++VLLSNIYA A  W     
Sbjct: 488 MEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAK 547

Query: 664 ------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPD 717
                 +K   K PG S IE   +VH F  GD  H     I GMLE + +   +AG++PD
Sbjct: 548 IRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPD 607

Query: 718 LSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISK 777
            S VL+++ E+ KE  L  HSEKLA+AF L    P + + I+KNLR+C +CH A K+ISK
Sbjct: 608 TSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISK 667

Query: 778 IVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           I +REII RD  RFHHF+DG CSC D+W
Sbjct: 668 IYKREIIARDRTRFHHFRDGVCSCNDYW 695



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 192/387 (49%), Gaps = 39/387 (10%)

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACAT 355
           A  +FE + + +++ W+ M   +A +   + A+ L+  M    + PN +TF  +L++CA 
Sbjct: 41  AISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAK 100

Query: 356 MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES----------- 404
            +    G QIH  V+++G   D++V  +L+ +Y + GR+E++ ++F +S           
Sbjct: 101 SKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTAL 160

Query: 405 --------------------PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATE 444
                               P ++ V+WN MI GY + G   +A+ +F +M++  V   E
Sbjct: 161 ITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDE 220

Query: 445 VTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDM 504
            T  SV+ ACA  A++E G QVH       +  ++ + NALID+Y KCG +  A  +F+ 
Sbjct: 221 STMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEG 280

Query: 505 MNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG 564
           ++  + +SWN +I GY+   L  E L +F  M + G  PN++T + +L AC++ G +E G
Sbjct: 281 LSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIG 340

Query: 565 E---AYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLG 621
                Y    +   G+     H TS++ +  + G ++ A ++ + I    S+  W A++ 
Sbjct: 341 RWIHVYINKRLK--GVANASSHRTSLIDMYAKCGDIEAAQQVFDSI-LNRSLSSWNAMIF 397

Query: 622 ACIIHN--NVEIGRLSAQHILDFEPED 646
              +H   N      S     + EP+D
Sbjct: 398 GFAMHGRANAAFDIFSRMRKNEIEPDD 424



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 161/370 (43%), Gaps = 69/370 (18%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N +++   L+SC ++   +    IH  VLK G  LDL+    L+++YV+  RL DA K+F
Sbjct: 87  NCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVF 146

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTL--------------------HREGHE 154
           D+   R+ +S+   I GY        A  +F  +                    ++E  E
Sbjct: 147 DQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALE 206

Query: 155 LNPFAFTAFLKVLVSMGWAELCPCVFAC---------------VYKLGHDSNAFVGTALI 199
           L    F   +K  V    + +   V AC               +   G  SN  +  ALI
Sbjct: 207 L----FKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALI 262

Query: 200 DAFSVCGCVEFARKVFDGL-FNDC---------------FEEALNFFSQMRAVGFKPNNF 243
           D +  CG VE A  +F+GL + D                ++EAL  F +M   G  PN+ 
Sbjct: 263 DLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDV 322

Query: 244 TFAFVLKACLGLDTIRVAKSAH--------GCALKTCYEMDLYVAVALLDLYTKSGEISN 295
           T   +L AC  L  I + +  H        G A  + +        +L+D+Y K G+I  
Sbjct: 323 TMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHR------TSLIDMYAKCGDIEA 376

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACAT 355
           A+++F+ +  + +  W+ MI  +A    +  A ++F RMR+  + P+  TFV +L AC+ 
Sbjct: 377 AQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSH 436

Query: 356 MEGLDLGNQI 365
              LDLG  I
Sbjct: 437 SGMLDLGRHI 446



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 137/292 (46%), Gaps = 36/292 (12%)

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN---SVELFAESPKRNHVTWNTMIVGYVQ 421
           IH+ +++ GL +  +  + L++        +    ++ +F    + N + WNTM  G+  
Sbjct: 6   IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 65

Query: 422 LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVV 481
             +   A+ ++  M+   +     T+  +L++CA   A   G Q+H   +K  YD+D+ V
Sbjct: 66  SSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYV 125

Query: 482 ANALIDMYAKCGSITDARLVFDMMND-------------------------WNE------ 510
             +LI MY + G + DAR VFD  +                          ++E      
Sbjct: 126 HTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDV 185

Query: 511 VSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKS 570
           VSWNAMISGY+  G + E L++F  M +   RP+  T V V+SAC+    +E G     S
Sbjct: 186 VSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQ-VHS 244

Query: 571 MVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
            + ++G    ++   +++ L  + G ++ A  L EG+ ++  V+ W  L+G 
Sbjct: 245 WIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYK-DVISWNTLIGG 295


>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 786

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 271/809 (33%), Positives = 403/809 (49%), Gaps = 131/809 (16%)

Query: 74  TAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYT 133
           TA  +HC+V+K G    ++  N L+NVY K      A KLFDEMP R   S+ T +  Y 
Sbjct: 32  TAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYA 91

Query: 134 VSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAF 193
                  +   F  L +                  S+ W                     
Sbjct: 92  KRGDMDSSCEFFDRLPQRD----------------SVSW--------------------- 114

Query: 194 VGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL 253
             T +I  +   G                + +A+    +M   G +P+ FT   VL +  
Sbjct: 115 --TTMIVGYKNIGQ---------------YHKAIRIMGEMMREGIEPSQFTLTNVLASVA 157

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIF------------- 300
               +   K  H   +K     ++ V+ +LL++Y K G+   A+ +F             
Sbjct: 158 ATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNA 217

Query: 301 ------------------EEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM-RQAFVAP 341
                             E+M ++D++ W+ MI+ Y Q    + A+++F +M R + ++P
Sbjct: 218 MIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSP 277

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL- 400
           ++FT  SVL ACA +E L +G QIHS +V  G      V NAL+ +Y++CG +E +  L 
Sbjct: 278 DRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLI 337

Query: 401 --------------------------------FAESPKRNHVTWNTMIVGYVQLGEVGKA 428
                                           F     R+ V W  MIVGY Q G  G+A
Sbjct: 338 EQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEA 397

Query: 429 MIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDM 488
           + +F  M+ E+      T +++L   +SLA+L  G Q+H   VK+     V V+NALI M
Sbjct: 398 INLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITM 457

Query: 489 YAKCGSITDARLVFDMMN-DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLT 547
           YAK GSIT A   FD++  + + VSW +MI   + HG + E L++F+ M   G RP+++T
Sbjct: 458 YAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHIT 517

Query: 548 FVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGI 607
           +VGV SAC++ GL+ QG  YF  M     I P + HY  MV L GRAG L +A + IE +
Sbjct: 518 YVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKM 577

Query: 608 PFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA 667
           P +P V+ W +LL AC ++ N+++G+++A+ +L  EPE+   +  L+N+Y+    WE+AA
Sbjct: 578 PIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAA 637

Query: 668 S-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIP 716
                       KE G SWIE +  VH F   D  H   N I   ++ +  + +K GY+P
Sbjct: 638 KIRKSMKDGRVKKEQGFSWIEVKHKVHAFGVEDGIHPQKNEIYITMKKIWDEIKKMGYVP 697

Query: 717 DLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIIS 776
           D ++VL D+ E+ KE+ L  HSEKLA+AF L   P  + +RI+KNLR+C DCHTAIK IS
Sbjct: 698 DTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFIS 757

Query: 777 KIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           K+V REII+RD  RFHHF+DG CSC D+W
Sbjct: 758 KLVGREIIVRDTTRFHHFKDGFCSCRDYW 786



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 153/337 (45%), Gaps = 72/337 (21%)

Query: 340 APNQFTFVSVLQACATM--------EGLDLGNQIHSLVVRVGLLSDVFVSNALMDV---- 387
           AP   +  ++L+ C  +         G      +H  V++ GL+  V++ N LM+V    
Sbjct: 3   APVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKT 62

Query: 388 ---------------------------YAKCGRMENSVELFAESPKRNHVTWNTMIVGYV 420
                                      YAK G M++S E F   P+R+ V+W TMIVGY 
Sbjct: 63  GYALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYK 122

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV 480
            +G+  KA+ +  +M+ E +  ++ T ++VL + A+   LE G +VH   VK     +V 
Sbjct: 123 NIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVS 182

Query: 481 VANALIDMYAKCGSITDARLVFDMM-----NDWNE------------------------- 510
           V+N+L++MYAKCG    A++VFD M     + WN                          
Sbjct: 183 VSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERD 242

Query: 511 -VSWNAMISGYSMHGLSAEVLKVFD-LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYF 568
            V+WN+MISGY+  G     L +F  +++     P+  T   VLSAC+N   L  GE   
Sbjct: 243 IVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQ-I 301

Query: 569 KSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
            S +   G +       +++S+  R G ++ A +LIE
Sbjct: 302 HSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIE 338



 Score = 46.2 bits (108), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 102/263 (38%), Gaps = 35/263 (13%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           NS++ A  L        L     IH   +K G    +  +N L+ +Y K   +  A++ F
Sbjct: 412 NSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAF 471

Query: 115 DEMP-ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV-----LV 168
           D +  ER+T+S+ + I          EA+ LF T+  EG   +   +           LV
Sbjct: 472 DLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLV 531

Query: 169 SMG--WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEA 226
           + G  + ++   V   +  L H +       ++D F   G +               +EA
Sbjct: 532 NQGRQYFDMMKDVDKIIPTLSHYA------CMVDLFGRAGLL---------------QEA 570

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAK-SAHGCALKTCYEMDLYVAVALLD 285
             F  +M     +P+  T+  +L AC     I + K +A    L        Y A+A  +
Sbjct: 571 QEFIEKM---PIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALA--N 625

Query: 286 LYTKSGEISNARRIFEEMPKKDV 308
           LY+  G+   A +I + M    V
Sbjct: 626 LYSACGKWEEAAKIRKSMKDGRV 648


>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
 gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
          Length = 534

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 235/534 (44%), Positives = 335/534 (62%), Gaps = 16/534 (2%)

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+++Y K G + +A+ +F++MP ++V+ W+ MI+ Y+   L+  A+E    M +  V PN
Sbjct: 6   LINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPN 65

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
            FT+ SVL+AC   +GL    Q+H  ++++GL SDVFV +AL+DVY++ G +EN++ +F 
Sbjct: 66  MFTYSSVLRAC---DGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFD 122

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
           E    + V W+++I G+ Q  +  +A+ +F +M      A + T +SVLRAC  LA LE 
Sbjct: 123 EMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLEL 182

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G QVH   +K  YD D+++ NAL+DMY KCGS+ DA  VF  M + + +SW+ MI+G + 
Sbjct: 183 GRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQ 240

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
           +G S E LK+F+ M+  G +PN +T VGVL ACS+ GL+E+G  YF SM   +GI+P  E
Sbjct: 241 NGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGRE 300

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDF 642
           HY  M+ LLGRAG L +A  LI  +  +P  + WRALL AC +H NV++   +A+ IL  
Sbjct: 301 HYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQILRL 360

Query: 643 EPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTS 691
           +P+D  T+VLLSNIYA  + W   A            KEPG SWIE    +H F  GD S
Sbjct: 361 DPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFILGDRS 420

Query: 692 HADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMP 751
           H  +  I   L  L  K    GY+PD + VL+D+  ++ +  L  HSEKLA+ F L  +P
Sbjct: 421 HPQIREINIQLNQLIYKLMGVGYVPDTNFVLQDLEGEQMQDSLRYHSEKLAIVFGLMSLP 480

Query: 752 PSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
               IRI KNLRIC DCH   K+++K+ QR I+IRD  R+HHFQDG CSCGDFW
Sbjct: 481 RGQTIRIRKNLRICGDCHLFTKLLAKMEQRIIVIRDPVRYHHFQDGLCSCGDFW 534



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 114/343 (33%), Positives = 175/343 (51%), Gaps = 23/343 (6%)

Query: 92  FATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHRE 151
           F  N+L+N+YVK   L DA  +FD+MP+RN +S+ T I  Y+ +    +A+     + RE
Sbjct: 1   FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60

Query: 152 GHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFA 211
           G   N F +++ L+    +       C   C+ K+G DS+ FV +ALID +S  G +E A
Sbjct: 61  GVRPNMFTYSSVLRACDGLFNLRQLHC---CIIKIGLDSDVFVRSALIDVYSRWGELENA 117

Query: 212 RKVFDGLF----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGL 255
            +VFD +                 N   +EAL  F +M+  GF     T   VL+AC GL
Sbjct: 118 LRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGL 177

Query: 256 DTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMI 315
             + + +  H   LK  Y+ DL +  ALLD+Y K G + +A  +F  M +KDVI WS MI
Sbjct: 178 ALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMI 235

Query: 316 ARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGL 374
           A  AQ   S +A++LF  M+   + PN  T V VL AC+    ++ G    HS+    G+
Sbjct: 236 AGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGI 295

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMI 416
                    ++D+  + GR+  +V+L  E   + + VTW  ++
Sbjct: 296 DPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALL 338



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 181/337 (53%), Gaps = 22/337 (6%)

Query: 189 DSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFV 248
           D N    T +I A+S       A K+ D        +AL F   M   G +PN FT++ V
Sbjct: 28  DRNVVSWTTMISAYS-------AAKLND--------KALEFLVLMLREGVRPNMFTYSSV 72

Query: 249 LKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDV 308
           L+AC GL  +R     H C +K   + D++V  AL+D+Y++ GE+ NA R+F+EM   D+
Sbjct: 73  LRACDGLFNLR---QLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMVTGDL 129

Query: 309 IPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSL 368
           + WS +IA +AQ     +A+ LF RM++A     Q T  SVL+AC  +  L+LG Q+H  
Sbjct: 130 VVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVH 189

Query: 369 VVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKA 428
           V++     D+ ++NAL+D+Y KCG +E++  +F    +++ ++W+TMI G  Q G   +A
Sbjct: 190 VLKYD--QDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEA 247

Query: 429 MIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM-QVHCLTVKANYDMDVVVANALID 487
           + +F  M    +    VT   VL AC+    +E G+   H +      D        +ID
Sbjct: 248 LKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMID 307

Query: 488 MYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
           +  + G +++A  L+ +M  + + V+W A+++   +H
Sbjct: 308 LLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVH 344



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 87/285 (30%), Positives = 139/285 (48%), Gaps = 34/285 (11%)

Query: 379 FVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE 438
           F+ N L+++Y K G + ++ ++F + P RN V+W TMI  Y       KA+     ML E
Sbjct: 1   FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60

Query: 439 QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDA 498
            V     TYSSVLRAC  L  L    Q+HC  +K   D DV V +ALID+Y++ G + +A
Sbjct: 61  GVRPNMFTYSSVLRACDGLFNLR---QLHCCIIKIGLDSDVFVRSALIDVYSRWGELENA 117

Query: 499 RLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNG 558
             VFD M   + V W+++I+G++ +    E L++F  M++ G+     T   VL AC+  
Sbjct: 118 LRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGL 177

Query: 559 GLLEQGE-------AYFKSMVANYG---------------------IEPCIEHYTSMVSL 590
            LLE G         Y + ++ N                       +E  +  +++M++ 
Sbjct: 178 ALLELGRQVHVHVLKYDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAG 237

Query: 591 LGRAGHLDKAAKLIEGIP---FQPSVMIWRALLGACIIHNNVEIG 632
           L + G+  +A KL E +     +P+ +    +L AC     VE G
Sbjct: 238 LAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEG 282



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 137/319 (42%), Gaps = 62/319 (19%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +Y++ L++C   D L     +HC ++K G   D+F  + L++VY +   L +A ++F
Sbjct: 65  NMFTYSSVLRAC---DGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVF 121

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           DEM   + + + + I G+  +S   EA+ LF  + R G        T+ L+    +   E
Sbjct: 122 DEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLE 181

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF---------------DGLF 219
           L   V   V+ L +D +  +  AL+D +  CG +E A  VF                GL 
Sbjct: 182 LGRQVH--VHVLKYDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLA 239

Query: 220 NDCF-EEALNFFSQMRAVGFKPNNFTFAFVLKAC-------------------LGLDTIR 259
            + + +EAL  F  M+ +G KPN  T   VL AC                    G+D   
Sbjct: 240 QNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDP-- 297

Query: 260 VAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIAR- 317
             +  +GC               ++DL  ++G +S A  +  EM  + D + W  ++   
Sbjct: 298 -GREHYGC---------------MIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNAC 341

Query: 318 --YAQTDLSIDAVELFCRM 334
             +   D++I A +   R+
Sbjct: 342 RVHRNVDVAIHAAKQILRL 360


>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 790

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 276/832 (33%), Positives = 418/832 (50%), Gaps = 135/832 (16%)

Query: 56  SHSYATSLQSCI--QNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
           ++ YA +L+ C+  +   LQ A  +H  ++  G        N L++VY K + L  A +L
Sbjct: 12  ANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQL 71

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           FDE+ E + I+  T + GY  S     A  +F        E  P          VSM   
Sbjct: 72  FDEISEPDKIARTTMVSGYCASGDIALARSVF--------EETP----------VSM--- 110

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQM 233
                            +  +  A+I  FS                N+    A+N F +M
Sbjct: 111 ----------------RDTVMYNAMITGFS---------------HNNDGYSAINLFCKM 139

Query: 234 RAVGFKPNNFTFAFVLKA-CLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           +  GFKP++FT+A VL    L +D  +     H  ALK+       V+ AL+ +Y++   
Sbjct: 140 KHEGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCAS 199

Query: 293 ----ISNARRIFEEMPKKDVIPWSFM--------------------------------IA 316
               + +AR++F+++P+KD   W+ M                                I+
Sbjct: 200 SPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMIS 259

Query: 317 RYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLS 376
            Y    L  +A+E+  RM  + +  ++FT+ SV++ACA    L LG Q+H+ V+R    S
Sbjct: 260 GYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFS 319

Query: 377 DVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML 436
             F  N+L+ +Y KCG+   +  +F + P ++ V+WN ++ GYV  G +G+A ++F +M 
Sbjct: 320 FHF-DNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMK 378

Query: 437 EEQV-------------------------------PATEVTYSSVLRACASLAALEPGMQ 465
           E+ +                                  +  +S  +++CA L A   G Q
Sbjct: 379 EKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQ 438

Query: 466 VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGL 525
            H   VK  +D  +   NALI MYAKCG + +A+ VF  M   + VSWNA+I+    HG 
Sbjct: 439 FHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGH 498

Query: 526 SAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYT 585
             E + V++ M ++G RP+ +TF+ VL+ACS+ GL++QG  YF SM   Y I P  +HY 
Sbjct: 499 GVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYA 558

Query: 586 SMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPE 645
            ++ LL R+G   +A  +IE +PF+P+  IW ALL  C +H N+E+G ++A  +    PE
Sbjct: 559 RLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPE 618

Query: 646 DEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHAD 694
            + T++LLSN+YA    WE+ A            KE   SWIE +  VH F   DTSH +
Sbjct: 619 HDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPE 678

Query: 695 MNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVRED-EKERYLWVHSEKLALAFALFKMPPS 753
              +   L+ L  + R+ GY+PD S VL DV  D  KE  L  HSEK+A+AF L K+PP 
Sbjct: 679 AEAVYKYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPG 738

Query: 754 SPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           + IRI KNLR C DCH   + +SK+VQR+II+RD  RFHHF++G CSCG+FW
Sbjct: 739 TTIRIFKNLRTCGDCHNFFRFLSKVVQRDIILRDRKRFHHFRNGECSCGNFW 790



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 129/307 (42%), Gaps = 59/307 (19%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E +  +Y + +++C     LQ    +H  VL++ +       N L+ +Y K  +  +A  
Sbjct: 283 ELDEFTYPSVIRACANARLLQLGKQVHAYVLRRED-FSFHFDNSLVTLYYKCGKFNEARA 341

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEA------------------------------- 141
           +F++MP ++ +S+   + GY  S    EA                               
Sbjct: 342 IFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEG 401

Query: 142 VGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDA 201
           + LFS + REG E   +AF+  +K    +G         A + K+G DS+   G ALI  
Sbjct: 402 LKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITM 461

Query: 202 FSVCGCVEFARKVFDGLFNDCFE------------------EALNFFSQMRAVGFKPNNF 243
           ++ CG VE A++VF  +   C +                  EA++ + +M   G +P+  
Sbjct: 462 YAKCGVVEEAQQVFRTM--PCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRI 519

Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEM----DLYVAVALLDLYTKSGEISNARRI 299
           TF  VL AC     +   +     +++T Y +    D Y    L+DL  +SG+ S A  I
Sbjct: 520 TFLTVLTACSHAGLVDQGRKYFN-SMETVYRIPPGADHY--ARLIDLLCRSGKFSEAESI 576

Query: 300 FEEMPKK 306
            E +P K
Sbjct: 577 IESLPFK 583


>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
          Length = 670

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 244/624 (39%), Positives = 358/624 (57%), Gaps = 44/624 (7%)

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           AL  +  M ++G  PN++TF F+LK+C  L   +     HG  LK  YE+DLYV  +L+ 
Sbjct: 47  ALKLYVCMISLGLLPNSYTFPFLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLIS 106

Query: 286 LYTKS-------------------------------GEISNARRIFEEMPKKDVIPWSFM 314
           +Y ++                               G I +AR +F+E+P KDV+ W+ M
Sbjct: 107 MYVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAM 166

Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL 374
           I+ Y +T    +A+ELF  M +  V P++ T V+V+ A A    ++LG Q+HS +   G 
Sbjct: 167 ISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGF 226

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
            S++ + NAL+D Y+KCG ME +  LF     ++ ++WN +I GY  L    +A+++F +
Sbjct: 227 GSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQE 286

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK--ANYDMDVVVANALIDMYAKC 492
           ML       +VT  S+L ACA L A++ G  +H    K          +  +LIDMY+KC
Sbjct: 287 MLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKC 346

Query: 493 GSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL 552
           G I  A  VF+ M   +  +WNAMI G++MHG +     +F  M++   +P+++TFVG+L
Sbjct: 347 GDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLL 406

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
           SACS+ G+L+ G   F+SM  NY I P +EHY  M+ LLG +G   +A ++I  +  +P 
Sbjct: 407 SACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPD 466

Query: 613 VMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW--------- 663
            +IW +LL AC +H NVE+G   AQ++   EP +  ++VLLSNIYA A  W         
Sbjct: 467 GVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGL 526

Query: 664 --EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAV 721
             +K   K PG S IE   +VH F  GD  H     I GMLE + +  ++AG++PD S V
Sbjct: 527 LNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLQEAGFVPDTSEV 586

Query: 722 LRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQR 781
           L+++ E+ KE  L  HSEKLA+AF L    P + + I+KNLR+C +CH A K+ISKI +R
Sbjct: 587 LQEMEEEFKEGALRHHSEKLAIAFGLISTKPETKLTIVKNLRVCRNCHEATKLISKIYKR 646

Query: 782 EIIIRDVHRFHHFQDGCCSCGDFW 805
           EII RD  RFHHF+DG CSC D+W
Sbjct: 647 EIIARDRTRFHHFRDGVCSCNDYW 670



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 114/470 (24%), Positives = 213/470 (45%), Gaps = 53/470 (11%)

Query: 107 LPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV 166
           LP A  +F+ + E N + + T  +G+ +S   V A+ L+  +   G   N + F   LK 
Sbjct: 13  LPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKS 72

Query: 167 LVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------- 216
              +  ++    +   V KLG++ + +V T+LI  +     +E A KVFD          
Sbjct: 73  CAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSY 132

Query: 217 -----------------GLFNDC--------------------FEEALNFFSQMRAVGFK 239
                             +F++                     ++EAL  F +M     +
Sbjct: 133 TALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVR 192

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           P+  T   V+ A     +I + +  H       +  +L +  AL+D Y+K GE+  A  +
Sbjct: 193 PDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGL 252

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL 359
           F  +  KDVI W+ +I  Y   +L  +A+ LF  M ++  +PN  T +S+L ACA +  +
Sbjct: 253 FLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAI 312

Query: 360 DLGNQIHSLVVR--VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIV 417
           D+G  IH  + +   G+ +   +  +L+D+Y+KCG +E + ++F     ++   WN MI 
Sbjct: 313 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIF 372

Query: 418 GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM 477
           G+   G    A  +FS+M + ++   ++T+  +L AC+    L+ G  +   ++  NY +
Sbjct: 373 GFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIF-RSMTHNYKI 431

Query: 478 DVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHG 524
              + +   +ID+    G   +A  ++  M  + + V W +++    MHG
Sbjct: 432 TPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHG 481



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 112/426 (26%), Positives = 188/426 (44%), Gaps = 56/426 (13%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK-- 112
           NS+++   L+SC +    +  + IH  VLK G  LDL+    L+++YV+  RL DA K  
Sbjct: 62  NSYTFPFLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVF 121

Query: 113 -----------------------------LFDEMPERNTISFVTTIQGYTVSSQFVEAVG 143
                                        +FDE+P ++ +S+   I GY  +  + EA+ 
Sbjct: 122 DRSSHRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALE 181

Query: 144 LFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFS 203
           LF  + +     +       +      G  EL   V + +   G  SN  +  ALID +S
Sbjct: 182 LFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYS 241

Query: 204 VCGCVEFARKVFDGL-FNDC---------------FEEALNFFSQMRAVGFKPNNFTFAF 247
            CG +E A  +F GL + D                ++EAL  F +M   G  PN+ T   
Sbjct: 242 KCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLS 301

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMD--LYVAVALLDLYTKSGEISNARRIFEEMPK 305
           +L AC  L  I + +  H    K    +     +  +L+D+Y+K G+I  A ++F  M  
Sbjct: 302 ILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLH 361

Query: 306 KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
           K +  W+ MI  +A    +  A ++F RMR+  + P+  TFV +L AC+    LDLG  I
Sbjct: 362 KSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHI 421

Query: 366 -HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE-SPKRNHVTWNTMIV-----G 418
             S+     +   +     ++D+    G  + + E+ +  + + + V W +++      G
Sbjct: 422 FRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHG 481

Query: 419 YVQLGE 424
            V+LGE
Sbjct: 482 NVELGE 487



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 118/257 (45%), Gaps = 33/257 (12%)

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           ++ +F    + N + WNTM  G+    +   A+ ++  M+   +     T+  +L++CA 
Sbjct: 16  AISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 75

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           L A + G+Q+H   +K  Y++D+ V  +LI MY +   + DA  VFD  +  + VS+ A+
Sbjct: 76  LKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTAL 135

Query: 517 ISGYSMHGL-------------------------------SAEVLKVFDLMQQRGWRPNN 545
           ++GY+  G                                  E L++F  M +   RP+ 
Sbjct: 136 VTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDE 195

Query: 546 LTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
            T V V+SA +  G +E G     S +A++G    ++   +++    + G ++ A  L  
Sbjct: 196 STMVTVISASARSGSIELGRQ-VHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFL 254

Query: 606 GIPFQPSVMIWRALLGA 622
           G+ ++  V+ W  L+G 
Sbjct: 255 GLSYK-DVISWNILIGG 270


>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 835

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 258/781 (33%), Positives = 421/781 (53%), Gaps = 30/781 (3%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
           F+S+++   L++C   +DL     IH   +K G    +F  N L+ +Y K N +  A KL
Sbjct: 56  FDSYTFPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKL 115

Query: 114 FDEMPERN-TISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           FD M  RN  +S+ + I  Y+ +    EA+ LFS + + G   N + F A L+      +
Sbjct: 116 FDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSF 175

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------------- 219
            +L   + A + K G   + +V  AL+  +   G +  A  +F  L              
Sbjct: 176 IKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTG 235

Query: 220 ---NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
              N  + EAL FF  ++    KP+  +   ++ A   L  +   K  H  A+K  ++ +
Sbjct: 236 FIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSN 295

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           + V   L+D+Y K   +S   R F+ M  KD+I W+   A YAQ    + A+EL  +++ 
Sbjct: 296 ILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQM 355

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             +  +     S+L AC  +  L    +IH   +R GL SD  + N ++DVY +CG ++ 
Sbjct: 356 EGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGL-SDPVLQNTIIDVYGECGIIDY 414

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           +V +F     ++ V+W +MI  YV  G   KA+ +FS M E  +    VT  S+L A  S
Sbjct: 415 AVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCS 474

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           L+ L+ G ++H   ++  + ++  ++N L+DMYA+CGS+ DA  +F    + N + W AM
Sbjct: 475 LSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAM 534

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           IS Y MHG     +++F  M+     P+++TF+ +L ACS+ GL+ +G+++ + M   Y 
Sbjct: 535 ISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQ 594

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
           +EP  EHYT +V LLGR   L++A ++++ +  +P+  +W ALLGAC IH+N EIG ++A
Sbjct: 595 LEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAA 654

Query: 637 QHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYF 685
           + +L+ + ++   +VL+SN++A    W+              +K PG SWIE    +H F
Sbjct: 655 EKLLELDLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIHAF 714

Query: 686 RAGDTSHADMNIIRGMLEWLNMK-SRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALA 744
            + D  H + + I   L  +  K  R+ GY+     VL +V E+EK + L+ HSE+LA+A
Sbjct: 715 LSRDKLHPECDKIYQKLAQVTEKLKREGGYVAQTKFVLHNVGEEEKVQMLYGHSERLAIA 774

Query: 745 FALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
           + L      +PIR+ KNLR+C DCH+   ++S+  +RE+I+RD  RFHHF+DG CSCGDF
Sbjct: 775 YGLLATAEGTPIRVTKNLRVCGDCHSFCTLVSRFFERELIVRDASRFHHFKDGMCSCGDF 834

Query: 805 W 805
           W
Sbjct: 835 W 835



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 152/552 (27%), Positives = 272/552 (49%), Gaps = 28/552 (5%)

Query: 100 VYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFA 159
           +Y K   + DA  +FD+M ER+  ++   + GY  + + + A+ ++  +   G   + + 
Sbjct: 1   MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60

Query: 160 FTAFLKVLVSMGWAELCPC---VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD 216
           F   LK   + G  E   C   +     K G DS  FV  +L+  ++ C  +  ARK+FD
Sbjct: 61  FPVLLK---ACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFD 117

Query: 217 GLF-----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIR 259
            ++                 N    EAL  FS+M   G   N +TFA  L+AC     I+
Sbjct: 118 RMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIK 177

Query: 260 VAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYA 319
           +    H   LK+   +D+YVA AL+ +Y + G++  A  IF  +  KD++ W+ M+  + 
Sbjct: 178 LGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFI 237

Query: 320 QTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVF 379
           Q  L  +A+E F  ++ A + P+Q + +S++ A   +  L  G +IH+  ++ G  S++ 
Sbjct: 238 QNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNIL 297

Query: 380 VSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ 439
           V N L+D+YAKC  M      F     ++ ++W T   GY Q     +A+ +  ++  E 
Sbjct: 298 VGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEG 357

Query: 440 VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR 499
           +        S+L AC  L  L    ++H  T++     D V+ N +ID+Y +CG I  A 
Sbjct: 358 MDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLS-DPVLQNTIIDVYGECGIIDYAV 416

Query: 500 LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGG 559
            +F+ +   + VSW +MIS Y  +GL+ + L+VF  M++ G  P+ +T V +LSA  +  
Sbjct: 417 RIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLS 476

Query: 560 LLEQGEAYFKSMV-ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRA 618
            L++G+     ++   + +E  I +  ++V +  R G ++ A K+        ++++W A
Sbjct: 477 TLKKGKEIHGFIIRKGFILEGSISN--TLVDMYARCGSVEDAYKIFTCTK-NRNLILWTA 533

Query: 619 LLGACIIHNNVE 630
           ++ A  +H   E
Sbjct: 534 MISAYGMHGYGE 545


>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1038

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 260/781 (33%), Positives = 412/781 (52%), Gaps = 28/781 (3%)

Query: 53   EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
            E N +S +  + SC    D      I  QV+K G    L   N L++++  +  +  A  
Sbjct: 258  ECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANY 317

Query: 113  LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
            +F+++ ER+TIS+ + +  Y  +    E+  +F+ + R   E+N    +  L VL  +  
Sbjct: 318  IFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDH 377

Query: 173  AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------------- 218
             +    +   V K+G DS   V   L+  ++  G  E A  VF  +              
Sbjct: 378  QKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMAS 437

Query: 219  -FNDCFE-EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
              ND    +AL     M   G   N  TF   L AC   +     +  HG  + +    +
Sbjct: 438  FVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDN 497

Query: 277  LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
              +  AL+ +Y K G +S +RR+  +MP++DV+ W+ +I  YA+ +    A+  F  +R 
Sbjct: 498  QIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRV 557

Query: 337  AFVAPNQFTFVSVLQAC-ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
              V+ N  T VSVL AC    + L+ G  +H+ +V  G  SD  V N+L+ +YAKCG + 
Sbjct: 558  EGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLS 617

Query: 396  NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
            +S +LF     R+ +TWN ++      G   + + + SKM    +   + ++S  L A A
Sbjct: 618  SSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAA 677

Query: 456  SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
             LA LE G Q+H L VK  +++D  + NA  DMY+KCG I +   +     + +  SWN 
Sbjct: 678  KLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNI 737

Query: 516  MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
            +IS    HG   EV + F  M + G +P ++TFV +L+ACS+GGL++QG AY+  +  ++
Sbjct: 738  LISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDF 797

Query: 576  GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS 635
            G+EP IEH   ++ LLGR+G L +A   I  +P +P+ ++WR+LL +C IH +++ GR +
Sbjct: 798  GLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHRDLDRGRKA 857

Query: 636  AQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHY 684
            A+++   EPED++  VL SN++A    WE           K   K+   SW++ +  V  
Sbjct: 858  AENLSKLEPEDDSVFVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSS 917

Query: 685  FRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALA 744
            F  GD +H     I   LE +    +++GY+ D S  L+D  E++KE  LW HSE+LALA
Sbjct: 918  FGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALA 977

Query: 745  FALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
            +AL   P  S +RI KNLRIC DCH+  K +S+++ R I++RD +RFHHF+ G CSC D+
Sbjct: 978  YALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFESGLCSCKDY 1037

Query: 805  W 805
            W
Sbjct: 1038 W 1038



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 159/576 (27%), Positives = 275/576 (47%), Gaps = 22/576 (3%)

Query: 74  TAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYT 133
           T   +H   +K    L +  TN L+N+Y K  R+  A  LFD+MP RN +S+ T + G  
Sbjct: 76  TGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIV 135

Query: 134 VSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG--WAELCPCVFACVYKLGHDSN 191
               ++E +  F  +   G + + F   + +      G  + E    V   V K G  S+
Sbjct: 136 RVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQ-VHGFVAKSGLLSD 194

Query: 192 AFVGTALIDAFSVCGCVEFARKVFDGL--------------FNDCFE--EALNFFSQMRA 235
            +V TA++  + V G V  +RKVF+ +              ++D  E  E ++ +  MR 
Sbjct: 195 VYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRG 254

Query: 236 VGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISN 295
            G + N  + + V+ +C  L    + +   G  +K+  E  L V  +L+ ++   G +  
Sbjct: 255 EGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDY 314

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACAT 355
           A  IF ++ ++D I W+ ++A YAQ     ++  +F  MR+     N  T  ++L     
Sbjct: 315 ANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGD 374

Query: 356 MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTM 415
           ++    G  IH LVV++G  S V V N L+ +YA  GR E +  +F + P ++ ++WN++
Sbjct: 375 VDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSL 434

Query: 416 IVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY 475
           +  +V  G    A+ +   M+        VT++S L AC S    + G  +H L V +  
Sbjct: 435 MASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGL 494

Query: 476 DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDL 535
             + ++ NAL+ MY K G ++ +R V   M   + V+WNA+I GY+ +    + L  F  
Sbjct: 495 FDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQT 554

Query: 536 MQQRGWRPNNLTFVGVLSAC-SNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
           ++  G   N +T V VLSAC   G LLE+G+    + + + G E       S++++  + 
Sbjct: 555 LRVEGVSANYITVVSVLSACLVPGDLLERGKP-LHAYIVSAGFESDEHVKNSLITMYAKC 613

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
           G L  +  L  G+    S++ W A+L A   H + E
Sbjct: 614 GDLSSSQDLFNGLD-NRSIITWNAILAANAHHGHGE 648


>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 818

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 278/805 (34%), Positives = 435/805 (54%), Gaps = 59/805 (7%)

Query: 46  PITFSVSEFNSHS--YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFA--TNVLLNVY 101
           P+T  +   + HS   A  L S  +  DL+    +H ++L+    LD  A   N LL +Y
Sbjct: 28  PLTAHLVLSSDHSCDAAKLLTSAARAGDLRLGRALHRRLLRS-EILDTDAVVANSLLTMY 86

Query: 102 VKLNRLPDATKLFDEM-PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAF 160
            K   +  A ++FD+M   R+ +S+  T     ++    E   L          L P AF
Sbjct: 87  SKCGAVEAARRVFDQMCGVRDLVSW--TAMASCLARNGAERESLRLLGEMLELGLRPNAF 144

Query: 161 T-------AFLKVLVSMGWAELCPCVFACVYKLGH-DSNAFVGTALIDAFSVCGCVEFAR 212
           T        F + L  +        V   V K G   ++  VG ALID F+  G +  A+
Sbjct: 145 TLCAAARACFPQELFRLAGG----VVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQ 200

Query: 213 KVFDGLFN----------------DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLD 256
           +VFDGL                   C  + +  F  M   GF+P+ ++ + ++ AC  L 
Sbjct: 201 RVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELG 260

Query: 257 TIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK---SGEISNARRIFEEMPKKDVIPWSF 313
           ++R+ +  H  AL+     D  V+  L+D+Y K      + +AR++F+ MP+ +V+ W+ 
Sbjct: 261 SVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTA 320

Query: 314 MIARYAQTDLSIDAV-ELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV 372
           +I+ Y Q+ +  + V  LF  M    + PN  T+ ++L+ACA +   D G QIH+ V++ 
Sbjct: 321 LISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKT 380

Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMF 432
            +     V NAL+ +YA+ G ME + + F +        + T I+      E  +     
Sbjct: 381 SIAHVNVVGNALVSMYAESGCMEEARKAFDQ-------LYETNILSMSPDVETERNNASC 433

Query: 433 SKMLEEQVPATEV-TYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAK 491
           S  +E         T++S+L A AS+  L  G ++H L++KA +  D  ++N+L+ MYA+
Sbjct: 434 SSKIEGMDDGVSTFTFASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYAR 493

Query: 492 CGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGV 551
           CG + DA   FD M D N +SW ++ISG + HG + + L +F  M   G +PN++T++ V
Sbjct: 494 CGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAV 553

Query: 552 LSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQP 611
           LSACS+ GL+++G+ +F+SM  ++G+ P +EHY  +V LL R+G +++A + I  +P + 
Sbjct: 554 LSACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINEMPCKA 613

Query: 612 SVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA---- 667
             ++W+ LL AC  + N EIG ++A H+++ EP D A +VLLSN+YA A  W++ A    
Sbjct: 614 DALVWKTLLSACRTYGNTEIGEIAANHVINLEPRDPAPYVLLSNLYADAGLWDEVARIRS 673

Query: 668 -------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSA 720
                  SKE GLSW++    +H FRAGDTSH     I   L  L  + +  GY+PD S 
Sbjct: 674 LMRDKNLSKETGLSWMDVGNTIHEFRAGDTSHPLAIDIYAKLVTLIREIKDIGYVPDTSI 733

Query: 721 VLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQ 780
           VL D+ E+ KE+YL  HSEK+A+AF L     + P+RI KNLR+C DCH+AIK ISK   
Sbjct: 734 VLHDMSEELKEQYLLQHSEKIAVAFGLITTSATKPMRIFKNLRVCADCHSAIKYISKSTG 793

Query: 781 REIIIRDVHRFHHFQDGCCSCGDFW 805
           REII+RD +RFH  +DG CSCG++W
Sbjct: 794 REIILRDSNRFHRMKDGICSCGEYW 818


>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 259/782 (33%), Positives = 410/782 (52%), Gaps = 32/782 (4%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E    +Y   L+ C           ++  V    +CL +   N LL+++V+   L DA  
Sbjct: 94  EVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWY 153

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +F +M ER+  S+   + GY  +  F EA+ L+  +       N + F + LK    +  
Sbjct: 154 VFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSD 213

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-----------GLFND 221
                 + A V + G +S+  VG ALI  +  CG +  AR +FD            + + 
Sbjct: 214 IARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISG 273

Query: 222 CFE-----EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
            FE     E L  FS MR +   P+  T   V  AC  LD  R+ +  HG  +K+ +  D
Sbjct: 274 YFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGD 333

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           + +  +L+ +Y+  G +  A  +F  M  KDV+ W+ MIA      L   AVE +  M  
Sbjct: 334 ISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMEL 393

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             + P++ T VSVL ACA +  LDLG ++H + ++ GL+S V VSN+L+D+Y+KC  ++N
Sbjct: 394 EGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDN 453

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           ++E+F     +N V+W ++I+G        +A++ F +M E   P + VT  SVL ACA 
Sbjct: 454 ALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKESMKPNS-VTLISVLSACAR 512

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           + AL  G ++H   ++     D  + NA++DMY +CG    A   F+     +  +WN +
Sbjct: 513 IGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQKK-DVTAWNIL 571

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           ++GY+  G +   +++FD M +    P+ +TF+ +L ACS  G++ +G  YF  M   Y 
Sbjct: 572 LTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYN 631

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
           + P ++HY  +V +LGRAG LD A   I+ +P +P   IW ALL AC IH NVE+G ++A
Sbjct: 632 LTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAA 691

Query: 637 QHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYF 685
           + + + + +    ++LL N+YA   +W+K +           S +PG SW+E +G VH F
Sbjct: 692 KRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAF 751

Query: 686 RAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAF 745
            +GD SH+    I G+L+    K ++ G+  +L +      E  +      HSE+ A+AF
Sbjct: 752 LSGDNSHSQSKEINGVLDGFCSKMKENGF-GNLKSSFTSEIESSRADIFCGHSERQAIAF 810

Query: 746 ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGD-- 803
            L    P  PI + KNL +C  CH  +K IS IV+REI +RDV  +HHF+DG CSCGD  
Sbjct: 811 GLINTAPGMPIWVTKNLYMCHSCHNMVKFISTIVRREISVRDVEEYHHFKDGVCSCGDEG 870

Query: 804 FW 805
           +W
Sbjct: 871 YW 872



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 2/200 (1%)

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
           G + +AM     MLE ++   E  Y ++LR C    A + G +V+ L   +   + V + 
Sbjct: 76  GNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLG 135

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
           NAL+ M+ + G++ DA  VF  M++ +  SWN ++ GY+  G   E L ++  M     R
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           PN  TF  VL  C+    + +G+    + V  +G E  ++   +++++  + G +  A  
Sbjct: 196 PNVYTFPSVLKTCAGVSDIARGKE-IHAHVIRFGFESDVDVGNALITMYVKCGDISNARM 254

Query: 603 LIEGIPFQPSVMIWRALLGA 622
           L + +P +  +  W A++  
Sbjct: 255 LFDKMPKRDRIS-WNAMISG 273


>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 796

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 271/783 (34%), Positives = 407/783 (51%), Gaps = 42/783 (5%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           Y   L+SC      + A  +H  +++      LF  N LL  Y +L     A +L DEMP
Sbjct: 20  YLHHLRSCSAP---RHAAAVHAHIVRAHPSPSLFLRNTLLAAYCRLG--GHARRLLDEMP 74

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHRE-GHELNPFAFTAFLKVLVSMGWAELCP 177
             N +SF   I  Y+ + Q   ++  F+   R  G   + F + A L      G      
Sbjct: 75  RTNAVSFNLLIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGK 134

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG----------------LFND 221
            V A     G     FV  +L+  ++ CG +  AR+VFD                 +   
Sbjct: 135 AVHALSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAG 194

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLD--TIRVAKSAHGCALKTCYEMDLYV 279
             ++ L  F+ MR  G   N+F    V+K C G D   + +A + HGC +K  ++ D+++
Sbjct: 195 AQDDMLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFL 254

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQ------TDLSIDAVELFCR 333
           A A++ +Y K G +S A  +F+ +   +V+ ++ MIA   +      TD+  +A+ L+  
Sbjct: 255 ASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSE 314

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           ++   + P +FTF SV++AC     ++ G QIH  V++     D F+ +AL+D+Y   G 
Sbjct: 315 VQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGC 374

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           ME+    F   PK++ VTW  MI G VQ     +A+ +F ++L   +     T SSV+ A
Sbjct: 375 MEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNA 434

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
           CASLA    G Q+ C   K+ +     + N+ I MYA+ G +  A   F  M   + VSW
Sbjct: 435 CASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSW 494

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA 573
           +A+IS ++ HG + + L+ F+ M      PN +TF+GVL+ACS+GGL+++G  Y+++M  
Sbjct: 495 SAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYYETMKE 554

Query: 574 NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGR 633
            Y + P I+H T +V LLGRAG L  A   I    F    +IWR+LL +C IH ++E G+
Sbjct: 555 EYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLASCRIHRDMERGQ 614

Query: 634 LSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMV 682
           L A  I++ +P   A++V L NIY  A              E+   KEPGLSWIE +  V
Sbjct: 615 LVADRIMELQPSSSASYVNLYNIYLDAGELSLASKIRDVMKERGVKKEPGLSWIELRSGV 674

Query: 683 HYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLA 742
           H F AGD SH + N I   L  +  K  K       S    D   +E+    W HSEKLA
Sbjct: 675 HSFVAGDKSHPESNAIYSKLAEMLSKIDKLTATDASSTKSDDTIRNEQSWMNW-HSEKLA 733

Query: 743 LAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCG 802
           +A  L  +P S+PIR++KNLR+C DCH  +K+ISK  +REI++RD  RFHHF+DG CSC 
Sbjct: 734 VALGLIHLPQSAPIRVMKNLRVCRDCHLTMKLISKSEKREIVLRDAIRFHHFRDGSCSCA 793

Query: 803 DFW 805
           D+W
Sbjct: 794 DYW 796



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 128/493 (25%), Positives = 243/493 (49%), Gaps = 28/493 (5%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +YA +L +C +   L+    +H   + +G    +F +N L+++Y +   +  A ++FD  
Sbjct: 116 TYAAALAACSRAGRLREGKAVHALSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAA 175

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG--WAEL 175
            ER+ +S+   + GY  +    + + +F+ + R G  LN FA  + +K          ++
Sbjct: 176 DERDDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDI 235

Query: 176 CPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN--------------- 220
              V  CV K G DS+ F+ +A++  ++  G +  A  +F  + +               
Sbjct: 236 AAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCR 295

Query: 221 -------DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY 273
                  D   EAL+ +S++++ G +P  FTF+ V++AC     I   K  HG  LK C+
Sbjct: 296 DEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCF 355

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
           + D ++  AL+DLY  SG + +  R F  +PK+DV+ W+ MI+   Q +L   A+ LF  
Sbjct: 356 QGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHE 415

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           +  A + P+ FT  SV+ ACA++     G QI     + G      + N+ + +YA+ G 
Sbjct: 416 LLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGD 475

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           +  +V  F E    + V+W+ +I  + Q G    A+  F++M++ +V   E+T+  VL A
Sbjct: 476 VHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTA 535

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDAR-LVFDMMNDWNE 510
           C+    ++ G++ +  T+K  Y +   + +   ++D+  + G + DA   + D +     
Sbjct: 536 CSHGGLVDEGLKYY-ETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEP 594

Query: 511 VSWNAMISGYSMH 523
           V W ++++   +H
Sbjct: 595 VIWRSLLASCRIH 607


>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Brachypodium distachyon]
          Length = 796

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 273/785 (34%), Positives = 415/785 (52%), Gaps = 42/785 (5%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLN--RLPDATKLFDE 116
           Y   L+SC     L  A  +H  + +      LF  N LL  Y +L       A +L DE
Sbjct: 16  YLHHLRSCAS---LPQAAAVHGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDE 72

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGH-ELNPFAFTAFLKVLVSMGWAEL 175
           MP RN +SF   I  Y+ + Q  E++  F   HR    + + F + A L      G  + 
Sbjct: 73  MPRRNAVSFNLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKE 132

Query: 176 CPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD----------------GLF 219
              V A     G     FV  +L+  ++ CG +  AR+VFD                 L 
Sbjct: 133 GKVVHALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLR 192

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLD-TIR-VAKSAHGCALKTCYEMDL 277
               EE L  F+ MR      N+F    V+K C G D ++R +A++ HGC +K   + DL
Sbjct: 193 VGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDL 252

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSI------DAVELF 331
           ++A A++D+Y K G +S A  +F+ +   +V+ ++ MIA   + + ++      +A+ L+
Sbjct: 253 FLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLY 312

Query: 332 CRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC 391
             ++   + P +FTF SV++AC     ++ G QIH  V++     D F+ +AL+D+Y   
Sbjct: 313 SELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNS 372

Query: 392 GRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVL 451
             ME+    F   PK++ VTW  MI G VQ     +A+ +F ++L   +     T SSV+
Sbjct: 373 ACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVM 432

Query: 452 RACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEV 511
            ACASLA +  G Q+ C   K+ +D    + N+ I MYA+ G++  A   F  M   + V
Sbjct: 433 NACASLAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVV 492

Query: 512 SWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSM 571
           SW+A+IS ++ HG + + L+ F+ M      PN +TF+GVL+ACS+GGL+++G  Y++ M
Sbjct: 493 SWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIM 552

Query: 572 VANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEI 631
              YG+ P ++H T +V LLGRAG L  A   I    F    ++W++LLG+C IH ++E 
Sbjct: 553 KMEYGLCPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLLGSCRIHRDMER 612

Query: 632 GRLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQG 680
           G+L A  I++ +P     +V L N+Y  A              E+   KEPGLSWIE + 
Sbjct: 613 GQLVADRIMELQPASSGCYVNLYNMYLDAGELSLGSKIRDLMKERGVKKEPGLSWIELRS 672

Query: 681 MVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEK 740
            +H F AGD SH + N I   L  +  K  K     D S +        ++ ++  HSEK
Sbjct: 673 GIHSFVAGDKSHPECNAIYTKLAEMLSKIDKL-TTTDTSCIEWVETTGREQNWMNCHSEK 731

Query: 741 LALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCS 800
           LA+A  +  +P S+PIR++KNLR+C DCH+ +K+ISK   REII+RDV RFHHF+DG CS
Sbjct: 732 LAVALGIIHLPQSAPIRVMKNLRVCRDCHSTMKLISKSECREIILRDVIRFHHFRDGSCS 791

Query: 801 CGDFW 805
           CGD+W
Sbjct: 792 CGDYW 796



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/496 (25%), Positives = 245/496 (49%), Gaps = 34/496 (6%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +YA +L +C +   L+    +H   + +G    +F +N L+++Y +   + +A ++FD  
Sbjct: 116 TYAAALAACSRAGRLKEGKVVHALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVT 175

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS-----MGW 172
            ER+ +S+ + + GY       E + +F+ + R    LN FA  + +K          G 
Sbjct: 176 EERDDVSWNSLVSGYLRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGI 235

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN------------ 220
           AE    V  CV K G D++ F+ +A++D ++  G +  A  +F  + +            
Sbjct: 236 AE---AVHGCVVKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAG 292

Query: 221 ----------DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALK 270
                     +   EAL+ +S++++ G +P  FTF+ V++AC     I   K  HG  LK
Sbjct: 293 LCRDEAAVHKEVVREALSLYSELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLK 352

Query: 271 TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVEL 330
            C++ D ++  AL+DLY  S  + +  R F  +PK+DV+ W+ MI+   Q +L   A+ L
Sbjct: 353 HCFQGDDFIGSALIDLYFNSACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFERALAL 412

Query: 331 FCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAK 390
           F  +    + P+ FT  SV+ ACA++  +  G Q+     + G      + N+ + +YA+
Sbjct: 413 FHELLGVGLKPDPFTISSVMNACASLAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYAR 472

Query: 391 CGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
            G +E +++ F E    + V+W+ +I  + Q G   +A+  F++M+  +V   E+T+  V
Sbjct: 473 SGNVEAAIQRFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGV 532

Query: 451 LRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDAR-LVFDMMND 507
           L AC+    ++ G++ + + +K  Y +   V +   ++D+  + G + DA   + D +  
Sbjct: 533 LTACSHGGLVDEGLRYYEI-MKMEYGLCPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFH 591

Query: 508 WNEVSWNAMISGYSMH 523
              V W +++    +H
Sbjct: 592 DEPVVWQSLLGSCRIH 607


>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Brachypodium distachyon]
          Length = 642

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 252/614 (41%), Positives = 353/614 (57%), Gaps = 27/614 (4%)

Query: 210 FARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAH---- 265
           F+R   DG F      AL     + A G + +  +   ++K C+   T+   ++ H    
Sbjct: 38  FSRLCLDGPFT----AALALLPDIAAAGVRADPVSLCRLIKLCVRHGTVGDGRAIHRHVS 93

Query: 266 --GCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQT-D 322
                        L+V+ +L+ +Y K G + +A  +F  MP+++V+ W+ ++A  A    
Sbjct: 94  LCAHGGGGATHGSLFVSNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPG 153

Query: 323 LSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSN 382
              +A+     MR+  VA N +TF SVL AC T   L     +H+ +++VGL SDVFV +
Sbjct: 154 RKKEALRFLVEMRRDGVAANSYTFSSVLGACGTPGVL---AAMHADIIKVGLDSDVFVRS 210

Query: 383 ALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPA 442
           +L+D Y K G +++   +F E    + V WN++I G+ Q G+   AM +F +M E    A
Sbjct: 211 SLIDAYMKLGDLDSGRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLA 270

Query: 443 TEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVF 502
            + T +SVLRAC  +  LE G QVH   +K  YD D+++ NAL+DMY KCG + DA  +F
Sbjct: 271 NQGTLTSVLRACTGMVMLEVGRQVHAHVLK--YDRDLILHNALLDMYCKCGCLLDADALF 328

Query: 503 DMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLE 562
             M+D + +SW+ MISG + +G S E LKVFDLM+  G  PNN+T VGVL ACS+ GL+E
Sbjct: 329 SRMHDRDVISWSTMISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVE 388

Query: 563 QGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
            G  YF+SM   +GI+P  EH   MV LLGRAG LD+A K I  + F+P  +IWR LLGA
Sbjct: 389 DGWHYFRSMDKLFGIQPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLGA 448

Query: 623 CIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEP 671
           C +H N  +   +A  IL  EPED+   +LLSNIYA  R W           ++   KEP
Sbjct: 449 CRMHKNATLASYAATEILKLEPEDQGARILLSNIYADLRQWSNAEKSWKTMRDQGVKKEP 508

Query: 672 GLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKE 731
           G SWIE   +VH F AG+ SH   + I   L  L  +++  GY+P    VL+D+  ++KE
Sbjct: 509 GRSWIELGKLVHVFIAGELSHPCSDRIVQELNRLIRRAKDLGYVPQTEFVLQDLGTEQKE 568

Query: 732 RYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRF 791
             L  HSEKLA+AF         P+RI+KNLRIC DCH   K++SK   + IIIRD  RF
Sbjct: 569 DLLKYHSEKLAIAFGTMNSMEGKPVRIMKNLRICGDCHAFAKLVSKTEGKAIIIRDPVRF 628

Query: 792 HHFQDGCCSCGDFW 805
           HHFQ G CSCGD+W
Sbjct: 629 HHFQHGVCSCGDYW 642



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 174/345 (50%), Gaps = 24/345 (6%)

Query: 91  LFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGY-TVSSQFVEAVGLFSTLH 149
           LF +N L+++Y K   L DA +LF  MP+RN +S+ T +        +  EA+     + 
Sbjct: 107 LFVSNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEMR 166

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
           R+G   N + F++   VL + G   +   + A + K+G DS+ FV ++LIDA+   G ++
Sbjct: 167 RDGVAANSYTFSS---VLGACGTPGVLAAMHADIIKVGLDSDVFVRSSLIDAYMKLGDLD 223

Query: 210 FARKVFDGL-------FNDCFE---------EALNFFSQMRAVGFKPNNFTFAFVLKACL 253
             R VFD +       +N              A+  F +M+  GF  N  T   VL+AC 
Sbjct: 224 SGRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACT 283

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSF 313
           G+  + V +  H   LK  Y+ DL +  ALLD+Y K G + +A  +F  M  +DVI WS 
Sbjct: 284 GMVMLEVGRQVHAHVLK--YDRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWST 341

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRV 372
           MI+  AQ   S++A+++F  M+     PN  T V VL AC+    ++ G +   S+    
Sbjct: 342 MISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDKLF 401

Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMI 416
           G+  +    N ++D+  + G+++ +++   E   + + V W T++
Sbjct: 402 GIQPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLL 446



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 85/371 (22%), Positives = 153/371 (41%), Gaps = 57/371 (15%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           NS+++++ L +C     L     +H  ++K G   D+F  + L++ Y+KL  L     +F
Sbjct: 173 NSYTFSSVLGACGTPGVLAA---MHADIIKVGLDSDVFVRSSLIDAYMKLGDLDSGRGVF 229

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           DEM   + + + + I G+  S   V A+ LF  +   G   N    T+ L+    M   E
Sbjct: 230 DEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTGMVMLE 289

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
           +   V A V K  +D +  +  AL+D +  CGC+  A  +F  +                
Sbjct: 290 VGRQVHAHVLK--YDRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWSTMISGLA 347

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE---- 274
            N    EAL  F  M+A G  PNN T   VL AC           +H   ++  +     
Sbjct: 348 QNGRSVEALKVFDLMKAEGPTPNNITMVGVLFAC-----------SHAGLVEDGWHYFRS 396

Query: 275 MDLYVAVA--------LLDLYTKSGEISNARRIFEEMP-KKDVIPWSFM----------- 314
           MD    +         ++DL  ++G++  A +   EM  + D + W  +           
Sbjct: 397 MDKLFGIQPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLGACRMHKNAT 456

Query: 315 IARYAQTD-LSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
           +A YA T+ L ++  +   R+  + +  +   + +  ++  TM    +  +     + +G
Sbjct: 457 LASYAATEILKLEPEDQGARILLSNIYADLRQWSNAEKSWKTMRDQGVKKEPGRSWIELG 516

Query: 374 LLSDVFVSNAL 384
            L  VF++  L
Sbjct: 517 KLVHVFIAGEL 527


>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
 gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
 gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
          Length = 939

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 253/777 (32%), Positives = 418/777 (53%), Gaps = 31/777 (3%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           + A+ L++C    D +    +H   +K G        N L+ +Y K   L  A ++F+ M
Sbjct: 165 TLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWM 224

Query: 118 PE-RNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
            + R+  S+ + I G   +  F+EA+ LF  +  +G  +N +     L+V   +      
Sbjct: 225 RDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHG 284

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------N 220
             + A + K G + N     AL+  ++ CG V+ A +VF  +                 N
Sbjct: 285 RELHAALLKCGTEFN-IQCNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQN 343

Query: 221 DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
             + EA++FF +M   GF P++     +L A   L  +   +  H  A+K   + DL +A
Sbjct: 344 RLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIA 403

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
             L+D+Y K   +  + R+F+ M  KD + W+ +IA YAQ+    +A+  F   ++  + 
Sbjct: 404 NTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIK 463

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
            +     S+L+AC+ ++ + L  Q+HS  +R GLL D+ + N ++D+Y +CG +  ++ +
Sbjct: 464 VDPMMMGSILEACSGLKSISLLKQVHSYAIRNGLL-DLILKNRIIDIYGECGEVCYALNI 522

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F    K++ VTW +M+  + + G + +A+ +F KML   +    V    +L A A L++L
Sbjct: 523 FEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSL 582

Query: 461 EPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY 520
             G ++H   ++  + ++  V ++L+DMY+ CGS+  A  VFD     + V W AMI+  
Sbjct: 583 TKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINAT 642

Query: 521 SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPC 580
            MHG   + + +F  M + G  P++++F+ +L ACS+  L+++G+ Y   MV+ Y ++P 
Sbjct: 643 GMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPW 702

Query: 581 IEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHIL 640
            EHY  +V LLGR+G  ++A K I+ +P +P  ++W ALLGAC IH N E+  ++   +L
Sbjct: 703 QEHYACVVDLLGRSGQTEEAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLL 762

Query: 641 DFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGD 689
           + EP++   +VL+SN++A    W           E+   K+P  SWIE    VH F A D
Sbjct: 763 ELEPDNPGNYVLVSNVFAEMGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARD 822

Query: 690 TSHADMNIIRGMLEWLNMKSRKAG-YIPDLSAVLRDVREDEKERYLWVHSEKLALAFALF 748
            SH D   I   L  +  K R+ G Y+ D S VL DV E+EK   L  HSE+LA++F L 
Sbjct: 823 HSHRDSQAIHLKLAEITEKLRREGQYVEDTSFVLHDVSEEEKIDLLHRHSERLAISFGLI 882

Query: 749 KMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
                +P+RI KNLR+C DCH   K++SK+ +REI++RD +RFHHF  G CSCGDFW
Sbjct: 883 STASGTPLRIAKNLRVCGDCHEFTKLVSKLFEREIVVRDANRFHHFSGGTCSCGDFW 939



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 159/559 (28%), Positives = 276/559 (49%), Gaps = 27/559 (4%)

Query: 92  FATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHRE 151
           F    LL +Y K  RLPDA +LFD MP R   S+   I     S    EAVG++  +   
Sbjct: 94  FLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRAS 153

Query: 152 ----GHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGC 207
               G   +     + LK   + G       V     K G D +  V  AL+  ++ CG 
Sbjct: 154 EPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGL 213

Query: 208 VEFARKVF----DG-------------LFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLK 250
           ++ A +VF    DG             + N  F EAL+ F +M++ GF  N++T   VL+
Sbjct: 214 LDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQ 273

Query: 251 ACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIP 310
            C  L  +   +  H   LK   E ++    ALL +Y + G + +A R+F E+  KD I 
Sbjct: 274 VCAELAQLNHGRELHAALLKCGTEFNIQCN-ALLVMYARCGWVDSALRVFREIGDKDYIS 332

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV 370
           W+ M++ Y Q  L  +A++ F  M Q    P+    VS+L A   +  L  G ++H+  V
Sbjct: 333 WNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAV 392

Query: 371 RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMI 430
           +  L SD+ ++N LMD+Y KC  +E S  +F     ++HV+W T+I  Y Q     +A+ 
Sbjct: 393 KQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIG 452

Query: 431 MFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYA 490
            F    +E +    +   S+L AC+ L ++    QVH   ++ N  +D+++ N +ID+Y 
Sbjct: 453 KFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIR-NGLLDLILKNRIIDIYG 511

Query: 491 KCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVG 550
           +CG +  A  +F+M++  + V+W +M++ ++ +GL  E + +F  M   G +P+++  VG
Sbjct: 512 ECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVG 571

Query: 551 VLSACSNGGLLEQGEAYFKSMV-ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF 609
           +L A +    L +G+     ++   + +E  +   +S+V +    G ++ A K+ +    
Sbjct: 572 ILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAV--VSSLVDMYSGCGSMNYALKVFDEAKC 629

Query: 610 QPSVMIWRALLGACIIHNN 628
           +  V++W A++ A  +H +
Sbjct: 630 K-DVVLWTAMINATGMHGH 647



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 123/393 (31%), Positives = 200/393 (50%), Gaps = 22/393 (5%)

Query: 186 LGHDSNAFVGTALIDAFSVCGCVEFARKVFDG-----------LFNDCFE-----EALNF 229
           LG D   F+ T L+  +  CG +  A ++FDG           L   C       EA+  
Sbjct: 87  LGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGV 146

Query: 230 FSQMRA----VGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           +  MRA     G  P+  T A VLKAC      R     HG A+K+  +    VA AL+ 
Sbjct: 147 YRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVG 206

Query: 286 LYTKSGEISNARRIFEEM-PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
           +Y K G + +A R+FE M   +DV  W+  I+   Q  + ++A++LF RM+    + N +
Sbjct: 207 MYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSY 266

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           T V VLQ CA +  L+ G ++H+ +++ G   ++   NAL+ +YA+CG +++++ +F E 
Sbjct: 267 TTVGVLQVCAELAQLNHGRELHAALLKCGTEFNI-QCNALLVMYARCGWVDSALRVFREI 325

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
             +++++WN+M+  YVQ     +A+  F +M++           S+L A   L  L  G 
Sbjct: 326 GDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGR 385

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
           +VH   VK   D D+ +AN L+DMY KC S+  +  VFD M   + VSW  +I+ Y+   
Sbjct: 386 EVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSS 445

Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSN 557
             +E +  F   Q+ G + + +    +L ACS 
Sbjct: 446 RYSEAIGKFRTAQKEGIKVDPMMMGSILEACSG 478



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/498 (24%), Positives = 230/498 (46%), Gaps = 40/498 (8%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
            NS++    LQ C +   L     +H  +LK G   ++   N LL +Y +   +  A ++
Sbjct: 263 MNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNI-QCNALLVMYARCGWVDSALRV 321

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           F E+ +++ IS+ + +  Y  +  + EA+  F  + + G   +     + L  +  +G  
Sbjct: 322 FREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRL 381

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF-------------- 219
                V A   K   DS+  +   L+D +  C  VE + +VFD +               
Sbjct: 382 INGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACY 441

Query: 220 --NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
             +  + EA+  F   +  G K +      +L+AC GL +I + K  H  A++    +DL
Sbjct: 442 AQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGL-LDL 500

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
            +   ++D+Y + GE+  A  IFE + KKD++ W+ M+  +A+  L  +AV LF +M  A
Sbjct: 501 ILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNA 560

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            + P+    V +L A A +  L  G +IH  ++R     +  V ++L+D+Y+ CG M  +
Sbjct: 561 GIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYA 620

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
           +++F E+  ++ V W  MI      G   +A+ +F +MLE  V    V++ ++L AC+  
Sbjct: 621 LKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACSHS 680

Query: 458 AALEPGMQVHCLTVKANYDMDVVVAN-----------ALIDMYAKCGSITDA-RLVFDMM 505
             ++ G           + +D++V+             ++D+  + G   +A + +  M 
Sbjct: 681 KLVDEG----------KFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMP 730

Query: 506 NDWNEVSWNAMISGYSMH 523
            +   V W A++    +H
Sbjct: 731 LEPKSVVWCALLGACRIH 748



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 174/381 (45%), Gaps = 28/381 (7%)

Query: 300 FEEMPKKDVIPWSFMIARY---AQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM 356
           F   P++ + P S   +        DL     +L  R  +    P    +  VL   A  
Sbjct: 9   FHPTPRRKLPPASAGASLRQLCKDGDLREALRQLAARSARGRAPPPTDHYGWVLDLVAVR 68

Query: 357 EGLDLGNQIHSLVVRVGLLSD---VFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
             +  G Q+H+  V  G L D    F++  L+ +Y KCGR+ ++  LF   P R   +WN
Sbjct: 69  RAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWN 128

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEV----TYSSVLRACASLAALEPGMQVHCL 469
            +I   +  G  G+A+ ++  M   +  A       T +SVL+AC +      G +VH L
Sbjct: 129 ALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGL 188

Query: 470 TVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEV-SWNAMISGYSMHGLSAE 528
            VK+  D   +VANAL+ MYAKCG +  A  VF+ M D  +V SWN+ ISG   +G+  E
Sbjct: 189 AVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLE 248

Query: 529 VLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMV 588
            L +F  MQ  G+  N+ T VGVL  C+    L  G     +++   G E  I+   +++
Sbjct: 249 ALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALL-KCGTEFNIQ-CNALL 306

Query: 589 SLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHIL-------- 640
            +  R G +D A ++   I      + W ++L +C + N     RL A+ I         
Sbjct: 307 VMYARCGWVDSALRVFREIG-DKDYISWNSML-SCYVQN-----RLYAEAIDFFGEMVQN 359

Query: 641 DFEPEDEATHVLLSNIYAMAR 661
            F P+      LLS +  + R
Sbjct: 360 GFNPDHACIVSLLSAVGHLGR 380


>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 259/782 (33%), Positives = 410/782 (52%), Gaps = 32/782 (4%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E    +Y   L+ C           ++  V    +CL +   N LL+++V+   L DA  
Sbjct: 94  EVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWY 153

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +F +M ER+  S+   + GY  +  F EA+ L+  +       N + F + LK    +  
Sbjct: 154 VFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSD 213

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-----------GLFND 221
                 + A V + G +S+  VG ALI  +  CG +  AR +FD            + + 
Sbjct: 214 IARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISG 273

Query: 222 CFE-----EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
            FE     E L  FS MR +   P+  T   V  AC  LD  R+ +  HG  +K+ +  D
Sbjct: 274 YFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGD 333

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           + +  +L+ +Y+  G +  A  +F  M  KDV+ W+ MIA      L   AVE +  M  
Sbjct: 334 ISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMEL 393

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             + P++ T VSVL ACA +  LDLG ++H + ++ GL+S V VSN+L+D+Y+KC  ++N
Sbjct: 394 EGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDN 453

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           ++E+F     +N V+W ++I+G        +A++ F +M E   P + VT  SVL ACA 
Sbjct: 454 ALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKESMKPNS-VTLISVLSACAR 512

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           + AL  G ++H   ++     D  + NA++DMY +CG    A   F+     +  +WN +
Sbjct: 513 IGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQKK-DVTAWNIL 571

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           ++GY+  G +   +++FD M +    P+ +TF+ +L ACS  G++ +G  YF  M   Y 
Sbjct: 572 LTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYN 631

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
           + P ++HY  +V +LGRAG LD A   I+ +P +P   IW ALL AC IH NVE+G ++A
Sbjct: 632 LTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAA 691

Query: 637 QHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYF 685
           + + + + +    ++LL N+YA   +W+K +           S +PG SW+E +G VH F
Sbjct: 692 KRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAF 751

Query: 686 RAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAF 745
            +GD SH+    I G+L+    K ++ G+  +L +      E  +      HSE+ A+AF
Sbjct: 752 LSGDNSHSQSKEINGVLDGFCSKMKENGF-GNLKSSFTSEIESSRADIFCGHSERQAIAF 810

Query: 746 ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGD-- 803
            L    P  PI + KNL +C  CH  +K IS IV+REI +RDV  +HHF+DG CSCGD  
Sbjct: 811 GLINTAPGMPIWVXKNLYMCHSCHNMVKFISTIVRREISVRDVEEYHHFKDGVCSCGDEG 870

Query: 804 FW 805
           +W
Sbjct: 871 YW 872



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 2/200 (1%)

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
           G + +AM     MLE ++   E  Y ++LR C    A + G +V+ L   +   + V + 
Sbjct: 76  GNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLG 135

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
           NAL+ M+ + G++ DA  VF  M++ +  SWN ++ GY+  G   E L ++  M     R
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           PN  TF  VL  C+    + +G+    + V  +G E  ++   +++++  + G +  A  
Sbjct: 196 PNVYTFPSVLKTCAGVSDIARGKE-IHAHVIRFGFESDVDVGNALITMYVKCGDISNARM 254

Query: 603 LIEGIPFQPSVMIWRALLGA 622
           L + +P +  +  W A++  
Sbjct: 255 LFDKMPKRDRIS-WNAMISG 273


>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
 gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 970

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 271/785 (34%), Positives = 424/785 (54%), Gaps = 40/785 (5%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +Y   +++C    D+   + +H  V+K G   D+F  N L++ Y     + DA +LFD M
Sbjct: 189 TYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIM 248

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE--- 174
           PERN +S+ + I+ ++ +    E+  L   +  E  +       A L  ++ +   E   
Sbjct: 249 PERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREI 308

Query: 175 -LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--------------GLF 219
            L   V     KL  D    +  AL+D +S CGC+  A+ +F               G F
Sbjct: 309 GLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGF 368

Query: 220 NDCFEEALNF--FSQMRAVG--FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
           +   +    F    QM A G   K +  T    +  C     +   K  H  +LK  +  
Sbjct: 369 SAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVY 428

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTD---LSIDAVELFC 332
           +  VA A +  Y K G +S A+R+F  +  K V  W+ +I  +AQ++   LS+DA     
Sbjct: 429 NELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDA---HL 485

Query: 333 RMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCG 392
           +M+ + + P+ FT  S+L AC+ ++ L LG ++H  ++R  L  D+FV  +++ +Y  CG
Sbjct: 486 QMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCG 545

Query: 393 RMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLR 452
            +     LF     ++ V+WNT+I GY+Q G   +A+ +F +M+   +    ++   V  
Sbjct: 546 ELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFG 605

Query: 453 ACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS 512
           AC+ L +L  G + H   +K   + D  +A +LIDMYAK GSIT +  VF+ + + +  S
Sbjct: 606 ACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS 665

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
           WNAMI GY +HGL+ E +K+F+ MQ+ G  P++LTF+GVL+AC++ GL+ +G  Y   M 
Sbjct: 666 WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMK 725

Query: 573 ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLI-EGIPFQPSVMIWRALLGACIIHNNVEI 631
           +++G++P ++HY  ++ +LGRAG LDKA +++ E +  +  V IW++LL +C IH N+E+
Sbjct: 726 SSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEM 785

Query: 632 GRLSAQHILDFEPEDEATHVLLSNIYAMARSWEK-----------AASKEPGLSWIENQG 680
           G   A  + + EPE    +VLLSN+YA    WE            +  K+ G SWIE   
Sbjct: 786 GEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNR 845

Query: 681 MVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEK 740
            V  F  G+        I+ +   L MK  K GY PD  +V  D+ E+EK   L  HSEK
Sbjct: 846 KVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEK 905

Query: 741 LALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCS 800
           LAL + L K    + IR+ KNLRICVDCH A K+ISK+++REI++RD  RFHHF++G CS
Sbjct: 906 LALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCS 965

Query: 801 CGDFW 805
           CGD+W
Sbjct: 966 CGDYW 970



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 229/449 (51%), Gaps = 27/449 (6%)

Query: 196 TALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQM-RAVGF 238
           T +I  +++CG  + +R VFD L                 N+ ++E L  F +M      
Sbjct: 124 TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDL 183

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
            P++FT+  V+KAC G+  + +  + HG  +KT    D++V  AL+  Y   G +++A +
Sbjct: 184 LPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQ 243

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ-----AFVAPNQFTFVSVLQAC 353
           +F+ MP+++++ W+ MI  ++    S ++  L   M +     AF+ P+  T V+VL  C
Sbjct: 244 LFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFM-PDVATLVTVLPVC 302

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
           A    + LG  +H   V++ L  ++ ++NALMD+Y+KCG + N+  +F  +  +N V+WN
Sbjct: 303 AREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWN 362

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLE--EQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
           TM+ G+   G+      +  +ML   E V A EVT  + +  C   + L    ++HC ++
Sbjct: 363 TMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSL 422

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
           K  +  + +VANA +  YAKCGS++ A+ VF  +      SWNA+I G++        L 
Sbjct: 423 KQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLD 482

Query: 532 VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLL 591
               M+  G  P++ T   +LSACS    L  G+     ++ N+ +E  +  Y S++SL 
Sbjct: 483 AHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW-LERDLFVYLSVLSLY 541

Query: 592 GRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
              G L     L + +    S++ W  ++
Sbjct: 542 IHCGELCTVQALFDAME-DKSLVSWNTVI 569



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 189/368 (51%), Gaps = 37/368 (10%)

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM- 334
           D  +   ++ +Y   G   ++R +F+ +  K++  W+ +I+ Y++ +L  + +E F  M 
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 178

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
               + P+ FT+  V++ACA M  + +G  +H LVV+ GL+ DVFV NAL+  Y   G +
Sbjct: 179 STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFV 238

Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ-----VPATEVTYSS 449
            ++++LF   P+RN V+WN+MI  +   G   ++ ++  +M+EE      +P    T  +
Sbjct: 239 TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDV-ATLVT 297

Query: 450 VLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWN 509
           VL  CA    +  G  VH   VK   D ++V+ NAL+DMY+KCG IT+A+++F M N+ N
Sbjct: 298 VLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKN 357

Query: 510 EVSWNAMISGYSMHGLSAEVLKVFDLMQQ-----RGWRPNNLTFVGVLSACSNGGLLE-- 562
            VSWN M+ G+S  G   +    FD+++Q        + + +T +  +  C +   L   
Sbjct: 358 VVSWNTMVGGFSAEG---DTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSL 414

Query: 563 --------QGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVM 614
                   + E  +  +VAN           + V+   + G L  A ++  GI    +V 
Sbjct: 415 KELHCYSLKQEFVYNELVAN-----------AFVASYAKCGSLSYAQRVFHGIR-SKTVN 462

Query: 615 IWRALLGA 622
            W AL+G 
Sbjct: 463 SWNALIGG 470



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 148/621 (23%), Positives = 268/621 (43%), Gaps = 50/621 (8%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCL---DLFATNVLLNVYVKLNRLPDATKLFDEMPE 119
           LQ+  +  D++    IH Q++     L   D+  T ++  +Y       D+  +FD +  
Sbjct: 91  LQASGKRKDIEMGRKIH-QLVSGSTRLRNDDVLCTRII-TMYAMCGSPDDSRFVFDALRS 148

Query: 120 RNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHEL-NPFAFTAFLKVLVSMGWAELCPC 178
           +N   +   I  Y+ +  + E +  F  +      L + F +   +K    M    +   
Sbjct: 149 KNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLA 208

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--------------GLFND--C 222
           V   V K G   + FVG AL+  +   G V  A ++FD               +F+D   
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268

Query: 223 FEEALNFFSQMRAV----GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            EE+     +M        F P+  T   VL  C     I + K  HG A+K   + +L 
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV 328

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           +  AL+D+Y+K G I+NA+ IF+    K+V+ W+ M+  ++      D    F  +RQ  
Sbjct: 329 LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEG---DTHGTFDVLRQML 385

Query: 339 -----VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
                V  ++ T ++ +  C     L    ++H   ++   + +  V+NA +  YAKCG 
Sbjct: 386 AGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGS 445

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           +  +  +F     +   +WN +I G+ Q  +   ++    +M    +     T  S+L A
Sbjct: 446 LSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSA 505

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
           C+ L +L  G +VH   ++   + D+ V  +++ +Y  CG +   + +FD M D + VSW
Sbjct: 506 CSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSW 565

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS---NGGLLEQGEAY-FK 569
           N +I+GY  +G     L VF  M   G +   ++ + V  ACS   +  L  +  AY  K
Sbjct: 566 NTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALK 625

Query: 570 SMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNV 629
            ++ +     C     S++ +  + G + +++K+  G+  + S   W A++    IH   
Sbjct: 626 HLLEDDAFIAC-----SLIDMYAKNGSITQSSKVFNGLK-EKSTASWNAMIMGYGIHG-- 677

Query: 630 EIGRLSAQHILDFEPEDEATH 650
               L+ + I  FE      H
Sbjct: 678 ----LAKEAIKLFEEMQRTGH 694



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 113/214 (52%), Gaps = 6/214 (2%)

Query: 349 VLQACATMEGLDLGNQIHSLVV-RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKR 407
           +LQA    + +++G +IH LV     L +D  +   ++ +YA CG  ++S  +F     +
Sbjct: 90  LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149

Query: 408 NHVTWNTMIVGYVQLGEVGKAMIMFSKMLE-EQVPATEVTYSSVLRACASLAALEPGMQV 466
           N   WN +I  Y +     + +  F +M+    +     TY  V++ACA ++ +  G+ V
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209

Query: 467 HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLS 526
           H L VK     DV V NAL+  Y   G +TDA  +FD+M + N VSWN+MI  +S +G S
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269

Query: 527 AE-VLKVFDLMQQRG---WRPNNLTFVGVLSACS 556
            E  L + ++M++ G   + P+  T V VL  C+
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA 303



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 76/327 (23%), Positives = 143/327 (43%), Gaps = 43/327 (13%)

Query: 21  INAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHC 80
           +N+W   +   A  +  + S      +  S    +S +  + L +C +   L+    +H 
Sbjct: 461 VNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHG 520

Query: 81  QVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVE 140
            +++     DLF    +L++Y+    L     LFD M +++ +S+ T I GY  +     
Sbjct: 521 FIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDR 580

Query: 141 AVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVF----ACVYKLGH--DSNAFV 194
           A+G+F  +   G +L        + ++   G   L P +     A  Y L H  + +AF+
Sbjct: 581 ALGVFRQMVLYGIQL------CGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFI 634

Query: 195 GTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGF 238
             +LID ++  G +  + KVF+GL                 +   +EA+  F +M+  G 
Sbjct: 635 ACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGH 694

Query: 239 KPNNFTFAFVLKAC-------LGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
            P++ TF  VL AC        GL  +   KS+ G       + +L     ++D+  ++G
Sbjct: 695 NPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFG------LKPNLKHYACVIDMLGRAG 748

Query: 292 EISNARRIF-EEMPKK-DVIPWSFMIA 316
           ++  A R+  EEM ++ DV  W  +++
Sbjct: 749 QLDKALRVVAEEMSEEADVGIWKSLLS 775


>gi|449508249|ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g33170-like [Cucumis sativus]
          Length = 840

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 250/744 (33%), Positives = 403/744 (54%), Gaps = 63/744 (8%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D +  N++++ Y  L  L +A KLF+E P  N+I++ + + GY  +   VE +  FS + 
Sbjct: 67  DKYTWNIMISAYANLGNLVEARKLFNETPIXNSITWSSLVSGYCKNGCEVEGLRQFSQMW 126

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
            +G + + +   + L+   ++        +     K+  ++N FV T L+D +S C C+ 
Sbjct: 127 SDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLL 186

Query: 210 FARKVFDGL-----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKAC 252
            A  +F  L                  N    +A+  F +MR  G + N+FTF  +L AC
Sbjct: 187 EAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTAC 246

Query: 253 LGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWS 312
             +      +  HGC + + +  ++YV  AL+D+Y K G++++AR I + M   DV+ W+
Sbjct: 247 TSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWN 306

Query: 313 FMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV 372
            MI          +A+ LF +M    +  + FT+ SVL++ A+ + L +G  +HSL ++ 
Sbjct: 307 SMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKT 366

Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMF 432
           G  +   VSNAL+D+YAK G +  ++++F +   ++ ++W +++ GYV  G   KA+ +F
Sbjct: 367 GFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLF 426

Query: 433 SKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKC 492
             M   +V   +   + V  ACA L  +E G QVH   +K++    +   N+LI MYAKC
Sbjct: 427 CDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKC 486

Query: 493 GSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL 552
           G + DA  V D M   N +SW A+I GY                                
Sbjct: 487 GCLEDAIRVXDSMETRNVISWTAIIVGY-------------------------------- 514

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
              +  GL+E G++YF+SM   YGI+P  + Y  M+ LLGRAG +++A  L+  +  +P 
Sbjct: 515 ---AQNGLVETGQSYFESMEKVYGIKPASDRYACMIDLLGRAGKINEAEHLLNRMDVEPD 571

Query: 613 VMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA----- 667
             IW++LL AC +H N+E+G  + ++++  EP +   +VLLSN++++A  WE AA     
Sbjct: 572 ATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRA 631

Query: 668 ------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAV 721
                  +EPG SWIE +  VH F + D SH     I   ++ + +  ++AG++PD++  
Sbjct: 632 MKTMGIXQEPGYSWIEMKSQVHTFISEDRSHPLAAEIYSKIDEMMILIKEAGHVPDMNFA 691

Query: 722 LRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQR 781
           LRD+ E+ KER L  HSEKLA+AF L  +   +PIRI KNLR+C DCH+A+K IS I +R
Sbjct: 692 LRDMDEEAKERSLAYHSEKLAVAFGLLTVAKGAPIRIFKNLRVCGDCHSAMKYISSIFKR 751

Query: 782 EIIIRDVHRFHHFQDGCCSCGDFW 805
            II+RD++ FHHF +G CSCGDFW
Sbjct: 752 HIILRDLNCFHHFIEGKCSCGDFW 775



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/377 (31%), Positives = 193/377 (51%), Gaps = 35/377 (9%)

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELF----------- 331
           LL   +K+G +  AR++F++MP +D   W+ MI+ YA     ++A +LF           
Sbjct: 43  LLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIXNSITW 102

Query: 332 -------CR-------MRQ------AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR 371
                  C+       +RQ          P+Q+T  SVL+AC+T+  L  G  IH   ++
Sbjct: 103 SSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIK 162

Query: 372 VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKR-NHVTWNTMIVGYVQLGEVGKAMI 430
           + L +++FV+  L+D+Y+KC  +  +  LF   P R N+V W  M+ GY Q GE  KA+ 
Sbjct: 163 IQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQ 222

Query: 431 MFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYA 490
            F +M  + + +   T+ S+L AC S++A   G QVH   + + +  +V V +AL+DMYA
Sbjct: 223 CFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYA 282

Query: 491 KCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVG 550
           KCG +  AR++ D M   + V WN+MI G   HG   E L +F  M  R  R ++ T+  
Sbjct: 283 KCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPS 342

Query: 551 VLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQ 610
           VL + ++   L+ GE+   S+    G + C     ++V +  + G+L  A  +   I   
Sbjct: 343 VLKSLASCKNLKIGES-VHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKI-LD 400

Query: 611 PSVMIWRALLGACIIHN 627
             V+ W +L+    +HN
Sbjct: 401 KDVISWTSLVTG-YVHN 416



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 144/301 (47%), Gaps = 38/301 (12%)

Query: 366 HSLVVR----VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQ 421
           H L +R    +   S    SN L+   +K GR++ + +LF + P R+  TWN MI  Y  
Sbjct: 21  HPLFIRCIHGIAHYSSNLDSNQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYAN 80

Query: 422 LGEVGKA-------------------------------MIMFSKMLEEQVPATEVTYSSV 450
           LG + +A                               +  FS+M  +    ++ T  SV
Sbjct: 81  LGNLVEARKLFNETPIXNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSV 140

Query: 451 LRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR-LVFDMMNDWN 509
           LRAC++L+ L  G  +HC  +K   + ++ VA  L+DMY+KC  + +A  L F + +  N
Sbjct: 141 LRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKN 200

Query: 510 EVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFK 569
            V W AM++GY+ +G S + ++ F  M+ +G   N+ TF  +L+AC++      G     
Sbjct: 201 YVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHG 260

Query: 570 SMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNV 629
            ++ + G  P +   +++V +  + G L  A  +++ +     V+ W +++  C+ H  +
Sbjct: 261 CIIWS-GFGPNVYVQSALVDMYAKCGDLASARMILDTMEID-DVVCWNSMIVGCVTHGYM 318

Query: 630 E 630
           E
Sbjct: 319 E 319



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 87/400 (21%), Positives = 156/400 (39%), Gaps = 56/400 (14%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N  ++ + L +C           +H  ++  G   +++  + L+++Y K   L  A  
Sbjct: 233 ESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARM 292

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           + D M   + + + + I G        EA+ LF  +H     ++ F + + LK L S   
Sbjct: 293 ILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKN 352

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------------- 219
            ++   V +   K G D+   V  AL+D ++  G +  A  VF+ +              
Sbjct: 353 LKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTG 412

Query: 220 ---NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
              N   E+AL  F  MR      + F  A V  AC  L  I   +  H   +K+     
Sbjct: 413 YVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSL 472

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           L    +L+ +Y K G + +A R+ + M  ++VI W+ +I  YAQ  L       F  M +
Sbjct: 473 LSAENSLITMYAKCGCLEDAIRVXDSMETRNVISWTAIIVGYAQNGLVETGQSYFESMEK 532

Query: 337 AF---------------------------------VAPNQFTFVSVLQACATMEGLDLGN 363
            +                                 V P+   + S+L AC     L+LG 
Sbjct: 533 VYGIKPASDRYACMIDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLELGE 592

Query: 364 QIHSLVVRV---GLLSDVFVSNALMDVYAKCGRMENSVEL 400
           +    ++++     L  V +SN    +++  GR E++  +
Sbjct: 593 RAGKNLIKLEPSNSLPYVLLSN----MFSVAGRWEDAAHI 628


>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
 gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
 gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
          Length = 856

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 289/843 (34%), Positives = 438/843 (51%), Gaps = 66/843 (7%)

Query: 13  KQLTHQSKINAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDL 72
           + LT      A LR LS+    S QQ  + +  P               +++S     D 
Sbjct: 30  RSLTAAGNHAAALRALSSITMASPQQQLDHSALP--------------PAIKSAAALRDA 75

Query: 73  QTAMTIHCQVLKKG--NCLDLFATNVLLNVYVKLNRLPDATKLFDEMPE--RNTISFVTT 128
           ++A  IH   L++G  +       N LL  Y +  RL  A ++F  + +   + +SF + 
Sbjct: 76  RSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSL 135

Query: 129 IQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC------PCVFAC 182
           I    +  ++  A+     +   GH L  F   + L+ +  +  A            FA 
Sbjct: 136 ISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFAL 195

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG------------------LFNDCFE 224
              L H    F   AL+  ++  G V  A+++F G                  + +  F+
Sbjct: 196 KNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFD 255

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC-YEMDLYVAVAL 283
           EA+     M A+G +P+  TFA  L AC  L+ + V +  H   +K      + +VA AL
Sbjct: 256 EAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASAL 315

Query: 284 LDLYTKSGEISNARRIFEEMPK--KDVIPWSFMIARYAQTDLSIDAVELFCRMR-QAFVA 340
           +D+Y    ++  AR++F+ +P   K +  W+ MI  YAQ  +  +A+ LF RM  +A   
Sbjct: 316 VDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFV 375

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           P + T  SVL ACA  E       +H  VV+ G+  + FV NALMD+YA+ G+ + +  +
Sbjct: 376 PCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRI 435

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKM--LEEQ-VPATEVTYSSVLRACASL 457
           FA     + V+WNT+I G V  G V  A  +  +M  LEE  V    +T  ++L  CA L
Sbjct: 436 FAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAIL 495

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
           AA   G ++H   V+   D DV V +AL+DMYAKCG +  +R VFD +   N ++WN +I
Sbjct: 496 AAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLI 555

Query: 518 SGYSMHGLSAEVLKVFDLMQQRG-WRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
             Y MHGL  E   +FD M   G  RPN +TF+  L+ACS+ G++++G   F +M  ++G
Sbjct: 556 MAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHG 615

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF-QPSVMIWRALLGACIIHNNVEIGRLS 635
           +EP  +    +V +LGRAG LD+A  ++  +   +  V  W  +LGAC +H NV +G ++
Sbjct: 616 VEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIA 675

Query: 636 AQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHY 684
            + +L+ EPE+ + +VLL NIY+ A  W +AA           +KEPG SWIE  G +H 
Sbjct: 676 GERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHR 735

Query: 685 FRAGDTSHADMNIIRGMLE--WLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLA 742
           F AG+++H     +   +E  W  M +R  GY PD S VL D+ + +K   L  HSEKLA
Sbjct: 736 FMAGESAHPASEEVHAHMEALWGEMVAR--GYTPDTSCVLHDMDDGDKAAVLRCHSEKLA 793

Query: 743 LAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCG 802
           +AF L +  P + IR+ KNLR+C DCH A K +SK+V REI++RDV RFHHF++G CSCG
Sbjct: 794 IAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCG 853

Query: 803 DFW 805
           D+W
Sbjct: 854 DYW 856


>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
          Length = 854

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 289/843 (34%), Positives = 438/843 (51%), Gaps = 66/843 (7%)

Query: 13  KQLTHQSKINAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDL 72
           + LT      A LR LS+    S QQ  + +  P               +++S     D 
Sbjct: 28  RSLTAAGNHAAALRALSSITMASPQQQLDHSALP--------------PAIKSAAALRDA 73

Query: 73  QTAMTIHCQVLKKG--NCLDLFATNVLLNVYVKLNRLPDATKLFDEMPE--RNTISFVTT 128
           ++A  IH   L++G  +       N LL  Y +  RL  A ++F  + +   + +SF + 
Sbjct: 74  RSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSL 133

Query: 129 IQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC------PCVFAC 182
           I    +  ++  A+     +   GH L  F   + L+ +  +  A            FA 
Sbjct: 134 ISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFAL 193

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG------------------LFNDCFE 224
              L H    F   AL+  ++  G V  A+++F G                  + +  F+
Sbjct: 194 KNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFD 253

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC-YEMDLYVAVAL 283
           EA+     M A+G +P+  TFA  L AC  L+ + V +  H   +K      + +VA AL
Sbjct: 254 EAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASAL 313

Query: 284 LDLYTKSGEISNARRIFEEMPK--KDVIPWSFMIARYAQTDLSIDAVELFCRMR-QAFVA 340
           +D+Y    ++  AR++F+ +P   K +  W+ MI  YAQ  +  +A+ LF RM  +A   
Sbjct: 314 VDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFV 373

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           P + T  SVL ACA  E       +H  VV+ G+  + FV NALMD+YA+ G+ + +  +
Sbjct: 374 PCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRI 433

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKM--LEEQ-VPATEVTYSSVLRACASL 457
           FA     + V+WNT+I G V  G V  A  +  +M  LEE  V    +T  ++L  CA L
Sbjct: 434 FAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAIL 493

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
           AA   G ++H   V+   D DV V +AL+DMYAKCG +  +R VFD +   N ++WN +I
Sbjct: 494 AAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLI 553

Query: 518 SGYSMHGLSAEVLKVFDLMQQRG-WRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
             Y MHGL  E   +FD M   G  RPN +TF+  L+ACS+ G++++G   F +M  ++G
Sbjct: 554 MAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHG 613

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF-QPSVMIWRALLGACIIHNNVEIGRLS 635
           +EP  +    +V +LGRAG LD+A  ++  +   +  V  W  +LGAC +H NV +G ++
Sbjct: 614 VEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIA 673

Query: 636 AQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHY 684
            + +L+ EPE+ + +VLL NIY+ A  W +AA           +KEPG SWIE  G +H 
Sbjct: 674 GERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHR 733

Query: 685 FRAGDTSHADMNIIRGMLE--WLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLA 742
           F AG+++H     +   +E  W  M +R  GY PD S VL D+ + +K   L  HSEKLA
Sbjct: 734 FMAGESAHPASEEVHAHMEALWGEMVAR--GYTPDTSCVLHDMDDGDKAAVLRCHSEKLA 791

Query: 743 LAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCG 802
           +AF L +  P + IR+ KNLR+C DCH A K +SK+V REI++RDV RFHHF++G CSCG
Sbjct: 792 IAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCG 851

Query: 803 DFW 805
           D+W
Sbjct: 852 DYW 854


>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
 gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
          Length = 854

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 289/843 (34%), Positives = 438/843 (51%), Gaps = 66/843 (7%)

Query: 13  KQLTHQSKINAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDL 72
           + LT      A LR LS+    S QQ  + +  P               +++S     D 
Sbjct: 28  RSLTAAGNHAAALRALSSITMASPQQQLDHSALP--------------PAIKSAAALRDA 73

Query: 73  QTAMTIHCQVLKKG--NCLDLFATNVLLNVYVKLNRLPDATKLFDEMPE--RNTISFVTT 128
           ++A  IH   L++G  +       N LL  Y +  RL  A ++F  + +   + +SF + 
Sbjct: 74  RSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSL 133

Query: 129 IQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC------PCVFAC 182
           I    +  ++  A+     +   GH L  F   + L+ +  +  A            FA 
Sbjct: 134 ISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFAL 193

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG------------------LFNDCFE 224
              L H    F   AL+  ++  G V  A+++F G                  + +  F+
Sbjct: 194 KNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFD 253

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC-YEMDLYVAVAL 283
           EA+     M A+G +P+  TFA  L AC  L+ + V +  H   +K      + +VA AL
Sbjct: 254 EAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASAL 313

Query: 284 LDLYTKSGEISNARRIFEEMPK--KDVIPWSFMIARYAQTDLSIDAVELFCRMR-QAFVA 340
           +D+Y    ++  AR++F+ +P   K +  W+ MI  YAQ  +  +A+ LF RM  +A   
Sbjct: 314 VDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFV 373

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           P + T  SVL ACA  E       +H  VV+ G+  + FV NALMD+YA+ G+ + +  +
Sbjct: 374 PCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRI 433

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKM--LEEQ-VPATEVTYSSVLRACASL 457
           FA     + V+WNT+I G V  G V  A  +  +M  LEE  V    +T  ++L  CA L
Sbjct: 434 FAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAIL 493

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
           AA   G ++H   V+   D DV V +AL+DMYAKCG +  +R VFD +   N ++WN +I
Sbjct: 494 AAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLI 553

Query: 518 SGYSMHGLSAEVLKVFDLMQQRG-WRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
             Y MHGL  E   +FD M   G  RPN +TF+  L+ACS+ G++++G   F +M  ++G
Sbjct: 554 MAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHG 613

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF-QPSVMIWRALLGACIIHNNVEIGRLS 635
           +EP  +    +V +LGRAG LD+A  ++  +   +  V  W  +LGAC +H NV +G ++
Sbjct: 614 VEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIA 673

Query: 636 AQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHY 684
            + +L+ EPE+ + +VLL NIY+ A  W +AA           +KEPG SWIE  G +H 
Sbjct: 674 GERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHR 733

Query: 685 FRAGDTSHADMNIIRGMLE--WLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLA 742
           F AG+++H     +   +E  W  M +R  GY PD S VL D+ + +K   L  HSEKLA
Sbjct: 734 FMAGESAHPASEEVHAHMEALWGEMVAR--GYTPDTSCVLHDMDDGDKAAVLRCHSEKLA 791

Query: 743 LAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCG 802
           +AF L +  P + IR+ KNLR+C DCH A K +SK+V REI++RDV RFHHF++G CSCG
Sbjct: 792 IAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCG 851

Query: 803 DFW 805
           D+W
Sbjct: 852 DYW 854


>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Brachypodium distachyon]
          Length = 796

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 255/644 (39%), Positives = 359/644 (55%), Gaps = 25/644 (3%)

Query: 187 GHDSNAFVGTALIDAFSVCGCVEFARKVFDG-------LFNDCF-----EEALNFFSQMR 234
           G  ++ FV +AL   +        ARKVFD        L+N         EAL  F +M 
Sbjct: 153 GFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSGSEALEAFVRMA 212

Query: 235 AVG-FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
             G  +P++ T A VL A   +    + +  H    K       +V   L+ LY K G++
Sbjct: 213 GAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDM 272

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
             AR +F+ M   D++ ++ +I+ Y+   +   +VELF  +    + P+  T V+++   
Sbjct: 273 ECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVH 332

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
           +      L   +H+ VV+ GL ++  VS AL  +Y +   M+++   F   P++   +WN
Sbjct: 333 SPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWN 392

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
            MI GY Q G    A+ +F +M    V    +T SS L ACA L AL  G  VH +    
Sbjct: 393 AMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANE 452

Query: 474 NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVF 533
             +++V V  ALIDMY KCGSI +AR +FD M++ N VSWN MISGY +HG  AE LK++
Sbjct: 453 KLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLY 512

Query: 534 DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGR 593
             M      P + TF+ VL ACS+GGL+++G   F+SM ++YGI P IEH T MV LLGR
Sbjct: 513 KDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDLLGR 572

Query: 594 AGHLDKAAKLIEGIPFQP-SVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVL 652
           AG L +A +LI   P       IW ALLGAC++H + ++ +L++Q + + EPE+   +VL
Sbjct: 573 AGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLAKLASQKLFELEPENTGYYVL 632

Query: 653 LSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGM 701
           LSN+Y   + + +AA            K PG + IE     H F AGD +H   + I   
Sbjct: 633 LSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGDRPHVFMAGDRAHPQSDAIYLY 692

Query: 702 LEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKN 761
           LE L  K  +AGY PD  A L DV E+EKE  + VHSEKLA+AF L    P + IRIIKN
Sbjct: 693 LEKLTAKMIEAGYRPDTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLNTEPGTEIRIIKN 752

Query: 762 LRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           LR+C+DCH A KIISK+ QR I++RD  RFHHF+DG CSCGD+W
Sbjct: 753 LRVCLDCHNATKIISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 796



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 196/400 (49%), Gaps = 17/400 (4%)

Query: 240 PNNFTFAFVLKACL------GLDTIRVAKSA----HGCALKTCYEMDLYVAVALLDLYTK 289
           P++F+FAF   +        G+     A +A    H  A+ + +  D +VA AL  LY  
Sbjct: 111 PDSFSFAFAATSLASSCSRGGISPPSAASAALRPLHALAVASGFAADNFVASALAKLYFT 170

Query: 290 SGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA-FVAPNQFTFVS 348
               ++AR++F+ +P  D + W+ ++A  + +    +A+E F RM  A  V P+  T  S
Sbjct: 171 LSRGNDARKVFDAVPSPDTVLWNTLLAGLSGS----EALEAFVRMAGAGSVRPDSTTLAS 226

Query: 349 VLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRN 408
           VL A A +    +G  +H+   + GL     V   L+ +YAKCG ME +  LF      +
Sbjct: 227 VLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRMEGPD 286

Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHC 468
            VT+N +I GY   G VG ++ +F +++   +  +  T  +++   +          +H 
Sbjct: 287 LVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHA 346

Query: 469 LTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAE 528
             VKA  D +  V+ AL  +Y +   +  AR  FD M +    SWNAMISGY+ +GL+  
Sbjct: 347 HVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEM 406

Query: 529 VLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMV 588
            + +F  MQ    RPN LT    LSAC+  G L  G+ +   ++AN  +E  +   T+++
Sbjct: 407 AVALFQQMQALNVRPNPLTISSALSACAQLGALSLGK-WVHKIIANEKLELNVYVMTALI 465

Query: 589 SLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
            +  + G + +A  + + +  + +V+ W  ++    +H  
Sbjct: 466 DMYVKCGSIAEARCIFDSMDNK-NVVSWNVMISGYGLHGQ 504



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 155/327 (47%), Gaps = 17/327 (5%)

Query: 97  LLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELN 156
           L+++Y K   +  A  LFD M   + +++   I GY+++     +V LF  L   G   +
Sbjct: 262 LISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPS 321

Query: 157 PFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD 216
                A + V    G   L  C+ A V K G D+NA V TAL   +     ++ AR+ FD
Sbjct: 322 SSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFD 381

Query: 217 GLF----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRV 260
            +                 N   E A+  F QM+A+  +PN  T +  L AC  L  + +
Sbjct: 382 AMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSL 441

Query: 261 AKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQ 320
            K  H        E+++YV  AL+D+Y K G I+ AR IF+ M  K+V+ W+ MI+ Y  
Sbjct: 442 GKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGL 501

Query: 321 TDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI-HSLVVRVGLLSDVF 379
                +A++L+  M  A + P   TF+SVL AC+    +  G  +  S+    G+   + 
Sbjct: 502 HGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIE 561

Query: 380 VSNALMDVYAKCGRMENSVELFAESPK 406
               ++D+  + G+++ + EL +E PK
Sbjct: 562 HCTCMVDLLGRAGQLKEAFELISEFPK 588



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 103/266 (38%), Gaps = 35/266 (13%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           +H  V+K G   +   +  L  +Y + N +  A + FD MPE+   S+   I GY  +  
Sbjct: 344 LHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGL 403

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
              AV LF  +       NP   ++ L     +G   L   V   +     + N +V TA
Sbjct: 404 TEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTA 463

Query: 198 LIDAFSVCGCVEFARKVFDGLFNDCF----------------EEALNFFSQMRAVGFKPN 241
           LID +  CG +  AR +FD + N                    EAL  +  M      P 
Sbjct: 464 LIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPT 523

Query: 242 NFTFAFVLKACL-------GLDTIRVAKSAHGC--ALKTCYEMDLYVAVALLDLYTKSGE 292
           + TF  VL AC        G    R   S +G    ++ C          ++DL  ++G+
Sbjct: 524 SSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHC--------TCMVDLLGRAGQ 575

Query: 293 ISNARRIFEEMPKKDVIP--WSFMIA 316
           +  A  +  E PK  V P  W  ++ 
Sbjct: 576 LKEAFELISEFPKSAVGPGIWGALLG 601



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 87/194 (44%), Gaps = 20/194 (10%)

Query: 442 ATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLV 501
           A+  +   +    A+ AAL P   +H L V + +  D  VA+AL  +Y       DAR V
Sbjct: 124 ASSCSRGGISPPSAASAALRP---LHALAVASGFAADNFVASALAKLYFTLSRGNDARKV 180

Query: 502 FDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW-RPNNLTFVGVLSACSNGGL 560
           FD +   + V WN +++G S     +E L+ F  M   G  RP++ T   VL A +    
Sbjct: 181 FDAVPSPDTVLWNTLLAGLS----GSEALEAFVRMAGAGSVRPDSTTLASVLPAAA---- 232

Query: 561 LEQGEAYFKSMVANYGIEPC----IEH-YTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMI 615
            E         V  +G E C     EH  T ++SL  + G ++ A  L + +   P ++ 
Sbjct: 233 -EVANTTMGRCVHAFG-EKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRME-GPDLVT 289

Query: 616 WRALLGACIIHNNV 629
           + AL+    I+  V
Sbjct: 290 YNALISGYSINGMV 303


>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 840

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 248/744 (33%), Positives = 408/744 (54%), Gaps = 63/744 (8%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D +  N++++ Y  L  L +A KLF+E P +N+I++ + + GY  +   VE +  FS + 
Sbjct: 67  DKYTWNIMISAYANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQMW 126

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
            +G + + +   + L+   ++        +     K+  ++N FV T L+D +S C C+ 
Sbjct: 127 SDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLL 186

Query: 210 FARKVFDGL-----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKAC 252
            A  +F  L                  N    +A+  F +MR  G + N+FTF  +L AC
Sbjct: 187 EAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTAC 246

Query: 253 LGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWS 312
             +      +  HGC + + +  ++YV  AL+D+Y K G++++AR I + M   DV+ W+
Sbjct: 247 TSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWN 306

Query: 313 FMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV 372
            MI          +A+ LF +M    +  + FT+ SVL++ A+ + L +G  +HSL ++ 
Sbjct: 307 SMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKT 366

Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMF 432
           G  +   VSNAL+D+YAK G +  ++++F +   ++ ++W +++ GYV  G   KA+ +F
Sbjct: 367 GFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLF 426

Query: 433 SKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKC 492
             M   +V   +   + V  ACA L  +E G QVH   +K++    +   N+LI MYAKC
Sbjct: 427 CDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKC 486

Query: 493 GSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL 552
           G + DA                               ++VFD M+ R    N +++  ++
Sbjct: 487 GCLEDA-------------------------------IRVFDSMETR----NVISWTAII 511

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
              +  GL+E G++YF+SM   YGI+P  +HY  M+ LLGRAG +++A  L+  +  +P 
Sbjct: 512 VGYAQNGLVETGQSYFESMEKVYGIKPASDHYACMIDLLGRAGKINEAEHLLNRMDVEPD 571

Query: 613 VMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA----- 667
             IW++LL AC +H N+E+G  + ++++  EP +   +VLLSN++++A  WE AA     
Sbjct: 572 ATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRA 631

Query: 668 ------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAV 721
                 +KEPG SWIE +  VH F + D SH     I   ++ + +  ++AG++PD++  
Sbjct: 632 MKTMGINKEPGYSWIEMKSQVHTFISEDRSHPLAAEIYSKIDEMMILIKEAGHVPDMNFA 691

Query: 722 LRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQR 781
           LRD+ E+ KER L  HSEKLA+AF L  +   +PIRI KNLR+C DCH+A+K IS I +R
Sbjct: 692 LRDMDEEAKERSLAYHSEKLAVAFGLLTVAKGAPIRIFKNLRVCGDCHSAMKYISSIFKR 751

Query: 782 EIIIRDVHRFHHFQDGCCSCGDFW 805
            II+RD++ FHHF +G CSCGDFW
Sbjct: 752 HIILRDLNCFHHFIEGKCSCGDFW 775



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 118/377 (31%), Positives = 193/377 (51%), Gaps = 35/377 (9%)

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELF----------- 331
           LL   +K+G +  AR++F++MP +D   W+ MI+ YA     ++A +LF           
Sbjct: 43  LLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIKNSITW 102

Query: 332 -------CR-------MRQ------AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR 371
                  C+       +RQ          P+Q+T  SVL+AC+T+  L  G  IH   ++
Sbjct: 103 SSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIK 162

Query: 372 VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKR-NHVTWNTMIVGYVQLGEVGKAMI 430
           + L +++FV+  L+D+Y+KC  +  +  LF   P R N+V W  M+ GY Q GE  KA+ 
Sbjct: 163 IQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQ 222

Query: 431 MFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYA 490
            F +M  + + +   T+ S+L AC S++A   G QVH   + + +  +V V +AL+DMYA
Sbjct: 223 CFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYA 282

Query: 491 KCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVG 550
           KCG +  AR++ D M   + V WN+MI G   HG   E L +F  M  R  R ++ T+  
Sbjct: 283 KCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPS 342

Query: 551 VLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQ 610
           VL + ++   L+ GE+   S+    G + C     ++V +  + G+L  A  +   I   
Sbjct: 343 VLKSLASCKNLKIGES-VHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKI-LD 400

Query: 611 PSVMIWRALLGACIIHN 627
             V+ W +L+    +HN
Sbjct: 401 KDVISWTSLVTG-YVHN 416



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 144/301 (47%), Gaps = 38/301 (12%)

Query: 366 HSLVVR----VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQ 421
           H L +R    +   S    SN L+   +K GR++ + +LF + P R+  TWN MI  Y  
Sbjct: 21  HPLFIRCIHGIAHYSSNLDSNQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYAN 80

Query: 422 LGEVGKA-------------------------------MIMFSKMLEEQVPATEVTYSSV 450
           LG + +A                               +  FS+M  +    ++ T  SV
Sbjct: 81  LGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSV 140

Query: 451 LRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR-LVFDMMNDWN 509
           LRAC++L+ L  G  +HC  +K   + ++ VA  L+DMY+KC  + +A  L F + +  N
Sbjct: 141 LRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKN 200

Query: 510 EVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFK 569
            V W AM++GY+ +G S + ++ F  M+ +G   N+ TF  +L+AC++      G     
Sbjct: 201 YVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHG 260

Query: 570 SMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNV 629
            ++ + G  P +   +++V +  + G L  A  +++ +     V+ W +++  C+ H  +
Sbjct: 261 CIIWS-GFGPNVYVQSALVDMYAKCGDLASARMILDTMEID-DVVCWNSMIVGCVTHGYM 318

Query: 630 E 630
           E
Sbjct: 319 E 319



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 88/400 (22%), Positives = 157/400 (39%), Gaps = 56/400 (14%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N  ++ + L +C           +H  ++  G   +++  + L+++Y K   L  A  
Sbjct: 233 ESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARM 292

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           + D M   + + + + I G        EA+ LF  +H     ++ F + + LK L S   
Sbjct: 293 ILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKN 352

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------------- 219
            ++   V +   K G D+   V  AL+D ++  G +  A  VF+ +              
Sbjct: 353 LKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTG 412

Query: 220 ---NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
              N   E+AL  F  MR      + F  A V  AC  L  I   +  H   +K+     
Sbjct: 413 YVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSL 472

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           L    +L+ +Y K G + +A R+F+ M  ++VI W+ +I  YAQ  L       F  M +
Sbjct: 473 LSAENSLITMYAKCGCLEDAIRVFDSMETRNVISWTAIIVGYAQNGLVETGQSYFESMEK 532

Query: 337 AF---------------------------------VAPNQFTFVSVLQACATMEGLDLGN 363
            +                                 V P+   + S+L AC     L+LG 
Sbjct: 533 VYGIKPASDHYACMIDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLELGE 592

Query: 364 QIHSLVVRV---GLLSDVFVSNALMDVYAKCGRMENSVEL 400
           +    ++++     L  V +SN    +++  GR E++  +
Sbjct: 593 RAGKNLIKLEPSNSLPYVLLSN----MFSVAGRWEDAAHI 628



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/270 (21%), Positives = 110/270 (40%), Gaps = 28/270 (10%)

Query: 51  VSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDA 110
           + +F   S   SL SC    +L+   ++H   +K G       +N L+++Y K   L  A
Sbjct: 335 IDDFTYPSVLKSLASC---KNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCA 391

Query: 111 TKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSM 170
             +F+++ +++ IS+ + + GY  +    +A+ LF  +     +L+ F           +
Sbjct: 392 LDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAEL 451

Query: 171 GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFF 230
              E    V A   K    S      +LI  ++ CGC+E A +VFD +      E  N  
Sbjct: 452 TVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVFDSM------ETRNVI 505

Query: 231 SQMR-AVGFKPNNF--TFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLY 287
           S     VG+  N    T     ++   +  I+ A   + C               ++DL 
Sbjct: 506 SWTAIIVGYAQNGLVETGQSYFESMEKVYGIKPASDHYAC---------------MIDLL 550

Query: 288 TKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
            ++G+I+ A  +   M  + D   W  +++
Sbjct: 551 GRAGKINEAEHLLNRMDVEPDATIWKSLLS 580


>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Brachypodium distachyon]
          Length = 940

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 254/777 (32%), Positives = 417/777 (53%), Gaps = 31/777 (3%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           + A+ L++     D +    +H   +K G     F  N L+ +Y K   L  A ++F+ M
Sbjct: 166 TLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELM 225

Query: 118 PE-RNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
            + R+  S+ + I G   +  F++A+ LF  + R    +N +     L+V   +    L 
Sbjct: 226 HDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLG 285

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FN 220
             + A + K G + N     AL+  ++ CG V+ A +VF  +                 N
Sbjct: 286 RELHAALLKSGSEVN-IQCNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQN 344

Query: 221 DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
             + EA+ F S+M   GF+P++     +  A   L  +   K  H  A+K   + D  V 
Sbjct: 345 GLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVG 404

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
             L+D+Y K   I  +  +F+ M  KD I W+ +I  YAQ+   I+A+E+F   ++  + 
Sbjct: 405 NTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIK 464

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
            +     S+L+AC+ +E + L  Q+H   +R GLL D+ V N ++D+Y +CG + +S+++
Sbjct: 465 VDPMMIGSILEACSGLETILLAKQLHCYAIRNGLL-DLVVKNRIIDIYGECGEVYHSLKM 523

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F    +++ VTW +MI  Y   G + +A+++F++M    V    V   S+L A   L++L
Sbjct: 524 FETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSL 583

Query: 461 EPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY 520
             G +VH   ++ N+ M+  + ++L+DMY+ CGS++ A  VF+ +   + V W AMI+  
Sbjct: 584 AKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINAT 643

Query: 521 SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPC 580
            MHG   + + +F  M Q G  P++++F+ +L ACS+  L+ +G+ Y   M++ Y +EP 
Sbjct: 644 GMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPW 703

Query: 581 IEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHIL 640
            EHY  +V LLGR+G  ++A + I+ +P +P  ++W +LLGAC +H N E+  ++A  +L
Sbjct: 704 QEHYACVVDLLGRSGQTEEAYEFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAANRLL 763

Query: 641 DFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGD 689
           + EP++   +VL+SN++A    W           E+   K+P  SWIE    VH F   D
Sbjct: 764 ELEPDNPGNYVLVSNVFAEMGKWNNAKEVRARISERGLRKDPACSWIEIGNNVHTFTTRD 823

Query: 690 TSHADMNIIRGMLEWLNMKSRK-AGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALF 748
            SH D   I   L  +  + RK  GY  D  +VL DV E+EK   L  HSE+LA++F L 
Sbjct: 824 NSHRDAERINLKLAEITERLRKEGGYTEDTRSVLHDVSEEEKVDVLHRHSERLAISFGLI 883

Query: 749 KMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
              P  P+RI KNLR+C DCH   K++SK+  R+I++RD +RFHHF  G CSCGDFW
Sbjct: 884 NTRPGMPLRIAKNLRVCGDCHEFTKLVSKLFDRDIVVRDANRFHHFSGGSCSCGDFW 940



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 163/561 (29%), Positives = 270/561 (48%), Gaps = 28/561 (4%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D F    LL +Y K  R+ DA  LFD M  R   S+   I  Y  S    EA+G++  + 
Sbjct: 94  DGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMR 153

Query: 150 ---REGHELNPFAFTAFLKVLVSMGWAELCPC-VFACVYKLGHDSNAFVGTALIDAFSVC 205
                G   +     + LK     G    C C V     K G D + FV  ALI  ++ C
Sbjct: 154 LSAASGVAPDGCTLASVLKASGVEGDGR-CGCEVHGLAVKHGLDRSTFVANALIAMYAKC 212

Query: 206 GCVEFARKVF----DG-------------LFNDCFEEALNFFSQMRAVGFKPNNFTFAFV 248
           G ++ A +VF    DG             L N  F +AL+ F  M+      N++T   V
Sbjct: 213 GILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGV 272

Query: 249 LKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDV 308
           L+ C  L  + + +  H   LK+  E+++    ALL +YTK G + +A R+F E+ +KD 
Sbjct: 273 LQVCTELAQLNLGRELHAALLKSGSEVNIQCN-ALLVMYTKCGRVDSALRVFREIDEKDY 331

Query: 309 IPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSL 368
           I W+ M++ Y Q  L  +A+E    M +    P+    VS+  A   +  L  G ++H+ 
Sbjct: 332 ISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAY 391

Query: 369 VVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKA 428
            ++  L SD  V N LMD+Y KC  +E S  +F     ++H++W T+I  Y Q     +A
Sbjct: 392 AIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEA 451

Query: 429 MIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDM 488
           + +F +  +E +    +   S+L AC+ L  +    Q+HC  ++ N  +D+VV N +ID+
Sbjct: 452 LEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIR-NGLLDLVVKNRIIDI 510

Query: 489 YAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTF 548
           Y +CG +  +  +F+ +   + V+W +MI+ Y+  GL  E L +F  MQ    +P+++  
Sbjct: 511 YGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVAL 570

Query: 549 VGVLSACSNGGLLEQGEAYFKSMV-ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGI 607
           V +L A      L +G+     ++  N+ +E  I   +S+V +    G L  A K+   +
Sbjct: 571 VSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAI--VSSLVDMYSGCGSLSGALKVFNAV 628

Query: 608 PFQPSVMIWRALLGACIIHNN 628
             +  V+ W A++ A  +H +
Sbjct: 629 KCKDMVL-WTAMINATGMHGH 648



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 210/422 (49%), Gaps = 18/422 (4%)

Query: 50  SVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD 109
           +V   NS++    LQ C +   L     +H  +LK G+ +++   N LL +Y K  R+  
Sbjct: 260 AVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNI-QCNALLVMYTKCGRVDS 318

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A ++F E+ E++ IS+ + +  Y  +  + EA+   S + R G + +     +    +  
Sbjct: 319 ALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGH 378

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------F 219
           +GW      V A   K   DS+  VG  L+D +  C  +E++  VFD +           
Sbjct: 379 LGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTI 438

Query: 220 NDCFE------EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY 273
             C+       EAL  F + +  G K +      +L+AC GL+TI +AK  H  A++   
Sbjct: 439 ITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGL 498

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
            +DL V   ++D+Y + GE+ ++ ++FE + +KD++ W+ MI  YA + L  +A+ LF  
Sbjct: 499 -LDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAE 557

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           M+   V P+    VS+L A   +  L  G ++H  ++R     +  + ++L+D+Y+ CG 
Sbjct: 558 MQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGS 617

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           +  ++++F     ++ V W  MI      G   +A+ +F +ML+  V    V++ ++L A
Sbjct: 618 LSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYA 677

Query: 454 CA 455
           C+
Sbjct: 678 CS 679



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 167/306 (54%), Gaps = 5/306 (1%)

Query: 264 AHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDL 323
           AH  A  +    D ++A  LL +Y K G +++AR +F+ M  + V  W+ +I  Y  +  
Sbjct: 82  AHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGS 141

Query: 324 SIDAVELFCRMR---QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFV 380
           + +A+ ++  MR    + VAP+  T  SVL+A         G ++H L V+ GL    FV
Sbjct: 142 ACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFV 201

Query: 381 SNALMDVYAKCGRMENSVELFA-ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ 439
           +NAL+ +YAKCG +++++ +F      R+  +WN+MI G +Q G   +A+ +F  M    
Sbjct: 202 ANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAV 261

Query: 440 VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR 499
           +     T   VL+ C  LA L  G ++H   +K+  +++ +  NAL+ MY KCG +  A 
Sbjct: 262 LSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVN-IQCNALLVMYTKCGRVDSAL 320

Query: 500 LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGG 559
            VF  +++ + +SWN+M+S Y  +GL AE ++    M + G++P++   V + SA  + G
Sbjct: 321 RVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLG 380

Query: 560 LLEQGE 565
            L  G+
Sbjct: 381 WLLNGK 386



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 102/234 (43%), Gaps = 7/234 (2%)

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
           N  + F+ +P        T +    + G + +A+ + +     + P  E  Y  VL   A
Sbjct: 11  NPYKKFSTTPPSISPPDPTSLKQLCKEGNLRQALRLLTSQTPGRSPPQE-HYGWVLDLVA 69

Query: 456 SLAALEPGMQVHCLTVKANY--DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
           +  A+  G+QVH   V        D  +A  L+ MY KCG + DARL+FD M+     SW
Sbjct: 70  AKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSW 129

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQ---QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKS 570
           NA+I  Y   G + E L V+  M+     G  P+  T   VL A    G    G      
Sbjct: 130 NALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCG-CEVHG 188

Query: 571 MVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACI 624
           +   +G++       +++++  + G LD A ++ E +     V  W +++  C+
Sbjct: 189 LAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCL 242


>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
          Length = 710

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 246/624 (39%), Positives = 362/624 (58%), Gaps = 44/624 (7%)

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           A+  +  M ++G  PN++TF F+LK+C  L   +  +  HG  LK  YE+DLYV  +L+ 
Sbjct: 87  AIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLIS 146

Query: 286 LYTKSGE-------------------------------ISNARRIFEEMPKKDVIPWSFM 314
           +Y K+G                                I +A+++F+E+P KDV+ W+ +
Sbjct: 147 MYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAI 206

Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL 374
           I+ YA T  + +A++LF  M +  V P++ T V+V+ ACA    + LG Q+HS +   GL
Sbjct: 207 ISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGL 266

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
            S++ + NAL+D+Y+KCG +E +  LF     ++ ++WNTMI GY  L    +A+++F +
Sbjct: 267 GSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQE 326

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK--ANYDMDVVVANALIDMYAKC 492
           ML       +VT  S+L ACA L A++ G  +H    K          +  +LIDMYAKC
Sbjct: 327 MLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKC 386

Query: 493 GSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL 552
           G I  A  VF+ M+     + NAMI G++MHG +     +F  M++ G  P+++TFVG+L
Sbjct: 387 GDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLL 446

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
           SACS+ G+L+ G   F+SM  NY I P +EHY  M+ LLG  G   +A ++I  +  +P 
Sbjct: 447 SACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPD 506

Query: 613 VMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW--------- 663
            +IW +LL AC +H NVE+G   AQ ++  EPE+  ++VLLSNIYA A  W         
Sbjct: 507 GVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEVANIRAL 566

Query: 664 --EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAV 721
             +K   K PG S IE   +VH F  GD  H     I GMLE + +   +AG++PD S V
Sbjct: 567 LNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEV 626

Query: 722 LRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQR 781
           L+++ E+ K+  L  HSEKLA+AF L    P + + I+KNLR+C +CH A K+ISKI +R
Sbjct: 627 LQEMEEEFKQGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKR 686

Query: 782 EIIIRDVHRFHHFQDGCCSCGDFW 805
           EII RD  RFHHF+DG CSC D+W
Sbjct: 687 EIIARDRTRFHHFRDGVCSCNDYW 710



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 134/524 (25%), Positives = 237/524 (45%), Gaps = 59/524 (11%)

Query: 56  SHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYV---KLNRLPDATK 112
           +H   + L +C     LQ+   IH Q++K G     +A + LL   +     + LP A  
Sbjct: 2   NHPSLSLLHNC---KTLQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAIS 58

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +F+ + E N + + T  +G+ +SS  V A+ L+  +   G   N + F   LK    +  
Sbjct: 59  VFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKV 118

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG--------------- 217
           ++    +   V KLG++ + +V T+LI  +   G  + A KVFDG               
Sbjct: 119 SKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITG 178

Query: 218 ------------LFNDC--------------------FEEALNFFSQMRAVGFKPNNFTF 245
                       +F++                      +EAL+ F +M     KP+  T 
Sbjct: 179 YASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTM 238

Query: 246 AFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPK 305
             V+ AC    +I++ +  H          +L +  AL+DLY+K GE+  A  +F+ +  
Sbjct: 239 VTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSN 298

Query: 306 KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
           KDVI W+ MI  Y   +L  +A+ LF  M ++   PN  T +S+L ACA +  +D G  I
Sbjct: 299 KDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWI 358

Query: 366 HSLVVR--VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
           H  + +   G+ +   +  +L+D+YAKCG +E + ++F     R     N MI G+   G
Sbjct: 359 HVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHG 418

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN 483
               A  +FS+M +  +   ++T+  +L AC+    L+ G ++   ++  NY +   + +
Sbjct: 419 RANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIF-RSMTQNYKITPKLEH 477

Query: 484 --ALIDMYAKCGSITDARLVFDMMN-DWNEVSWNAMISGYSMHG 524
              +ID+    G   +A  + + M  + + V W +++    MHG
Sbjct: 478 YGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHG 521



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 189/393 (48%), Gaps = 42/393 (10%)

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISN---ARRIFEEMP 304
           +L  C  L ++R+    H   +KT      Y    LL+    S        A  +FE + 
Sbjct: 8   LLHNCKTLQSLRII---HAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQ 64

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
           + +++ W+ M   +A +   + A++L+  M    + PN +TF  +L++CA ++    G Q
Sbjct: 65  EPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQ 124

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGR------------------------------- 393
           IH  V+++G   D++V  +L+ +Y K GR                               
Sbjct: 125 IHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGY 184

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           +E++ ++F E P ++ V+WN +I GY   G   +A+ +F +M++  V   E T  +V+ A
Sbjct: 185 IESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSA 244

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
           CA   +++ G QVH          ++ + NALID+Y+KCG +  A  +F  +++ + +SW
Sbjct: 245 CAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISW 304

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE---AYFKS 570
           N MI GY+   L  E L +F  M + G  PN++T + +L AC+  G ++ G     Y   
Sbjct: 305 NTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDK 364

Query: 571 MVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKL 603
            +   G+       TS++ +  + G ++ A ++
Sbjct: 365 RIK--GVTNASSLRTSLIDMYAKCGDIEAAHQV 395



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 114/452 (25%), Positives = 194/452 (42%), Gaps = 59/452 (13%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDA---- 110
           NS+++   L+SC +    +    IH  VLK G  LDL+    L+++YVK  R  DA    
Sbjct: 102 NSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVF 161

Query: 111 ---------------------------TKLFDEMPERNTISFVTTIQGYTVSSQFVEAVG 143
                                       K+FDE+P ++ +S+   I GY  +    EA+ 
Sbjct: 162 DGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALD 221

Query: 144 LFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFS 203
           LF  + +   + +       +      G  +L   V + +   G  SN  +  ALID +S
Sbjct: 222 LFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYS 281

Query: 204 VCGCVEFARKVFDGLFN----------------DCFEEALNFFSQMRAVGFKPNNFTFAF 247
            CG VE A  +F GL N                + ++EAL  F +M   G  PN+ T   
Sbjct: 282 KCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLS 341

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMD--LYVAVALLDLYTKSGEISNARRIFEEMPK 305
           +L AC  L  I   +  H    K    +     +  +L+D+Y K G+I  A ++F  M  
Sbjct: 342 ILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHH 401

Query: 306 KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
           + +   + MI  +A    +  A ++F RMR+  + P+  TFV +L AC+    LDLG +I
Sbjct: 402 RTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRI 461

Query: 366 -HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF-AESPKRNHVTWNTMIV-----G 418
             S+     +   +     ++D+    G  + + E+    + + + V W +++      G
Sbjct: 462 FRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHG 521

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
            V+LGE     ++    +E + P + V  S++
Sbjct: 522 NVELGESFAQKLI---KIEPENPGSYVLLSNI 550



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/310 (23%), Positives = 143/310 (46%), Gaps = 39/310 (12%)

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMD---VYAKCGRMENSVELFAE 403
           +S+L  C T++ L +   IH+ +++ GL +  +  + L++   +      +  ++ +F  
Sbjct: 6   LSLLHNCKTLQSLRI---IHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFET 62

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
             + N + WNTM  G+    +   A+ ++  M+   +     T+  +L++CA L   + G
Sbjct: 63  IQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEG 122

Query: 464 MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMH 523
            Q+H   +K  Y++D+ V  +LI MY K G   DA  VFD  +  + VS+ A+I+GY+  
Sbjct: 123 QQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASR 182

Query: 524 GL-------------------------------SAEVLKVFDLMQQRGWRPNNLTFVGVL 552
           G                                + E L +F  M +   +P+  T V V+
Sbjct: 183 GYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVV 242

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
           SAC+  G ++ G     S + ++G+   ++   +++ L  + G ++ A  L +G+     
Sbjct: 243 SACAQSGSIQLGRQ-VHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLS-NKD 300

Query: 613 VMIWRALLGA 622
           V+ W  ++G 
Sbjct: 301 VISWNTMIGG 310


>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 265/766 (34%), Positives = 398/766 (51%), Gaps = 67/766 (8%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           SE  + +Y + LQ C     L     +H  +      +D      L++ Y     L +  
Sbjct: 95  SELETKTYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGR 154

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
           ++FD M ++N   +   +  Y     F E++ LF  +  +G E       + L       
Sbjct: 155 RVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASEL------- 207

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFS 231
           + +LC            D +     ++I  +           V +GL     E  L  + 
Sbjct: 208 FDKLC------------DRDVISWNSMISGY-----------VSNGLT----ERGLGIYK 240

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
           QM  +G   +  T   VL  C    T+ + K+ H  A+K+ +E  +  +  LLD+Y+K G
Sbjct: 241 QMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCG 300

Query: 292 EISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQ 351
           ++  A R+FE+M +++V+ W+ MIA Y +   S  A+ L  +M +  V  +     S+L 
Sbjct: 301 DLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILH 360

Query: 352 ACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
           ACA    LD G  +H  +    + S++FV NALMD+YAKCG ME +  +F+    ++ ++
Sbjct: 361 ACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIIS 420

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
           WNTM+      GE+               P +  T + +L ACASL+ALE G ++H   +
Sbjct: 421 WNTMV------GELK--------------PDSR-TMACILPACASLSALERGKEIHGYIL 459

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
           +  Y  D  VANAL+D+Y KCG +  ARL+FDM+   + VSW  MI+GY MHG   E + 
Sbjct: 460 RNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIA 519

Query: 532 VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLL 591
            F+ M+  G  P+ ++F+ +L ACS+ GLLEQG  +F  M  ++ IEP +EHY  MV LL
Sbjct: 520 TFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLL 579

Query: 592 GRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHV 651
            R G+L KA K IE +P  P   IW ALL  C I++++E+    A+ + + EPE+   +V
Sbjct: 580 SRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYV 639

Query: 652 LLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAG-DTSHADMNIIR 699
           LL+NIYA A   E           K   K PG SWIE +G V+ F +G ++SH     I 
Sbjct: 640 LLANIYAEAEKREEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIE 699

Query: 700 GMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRII 759
            +L+ +  K ++ GY P     L +  E +KE  L  HSEKLA+AF L  +PP   IR+ 
Sbjct: 700 SLLKKMRRKMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVT 759

Query: 760 KNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           KNLR+C DCH   K +SK  +REI++RD +RFHHF+DG CSC  FW
Sbjct: 760 KNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 805


>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
 gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
          Length = 746

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 245/654 (37%), Positives = 370/654 (56%), Gaps = 28/654 (4%)

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG-------LFNDC--------- 222
           ++A +   G     F+   L++  S  G V  ARK+FD        L+N           
Sbjct: 94  IYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGF 153

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
           F  A+  +++M+     P+ F+F  VLKAC  L  + + +  HG   +  +E D++V   
Sbjct: 154 FGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNG 213

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+ LY K GEI  A  +F  +  + ++ W+ +I+ YAQ    I+A+ +F  MR+  V P+
Sbjct: 214 LVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPD 273

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
               VSVL+A   +E L+ G  IH  V+++GL  +  +  +L  +YAKCG +  +   F 
Sbjct: 274 WIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFN 333

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
           +    + + WN MI GYV+ G   +A+ +F  M  + +    +T +S + ACA + +LE 
Sbjct: 334 QVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLEL 393

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
              +      + +  DV+V  +LID YAKCGS+  AR VFD + D + V W+AM+ GY +
Sbjct: 394 ARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGL 453

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
           HG   E + +F  M+Q G  PN++TFVG+L+AC N GL+E+G   F  M  +YGIEP  +
Sbjct: 454 HGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRM-RDYGIEPRHQ 512

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDF 642
           HY  +V LLGRAGHLD+A   +  +P +P V +W ALL AC IH +V +G  +A+ +   
Sbjct: 513 HYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAERLFSL 572

Query: 643 EPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTS 691
           +P +   +V LSN+YA +  W           EK  +K  G S IE  G +  F+AGD +
Sbjct: 573 DPYNTGHYVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQAFQAGDKT 632

Query: 692 HADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMP 751
           H     I   +E L  + ++AG++P   +VL D+  +E E  L  HSE+LA+A+ L   P
Sbjct: 633 HPRSKEIFEEVEDLERRLKEAGFVPHTESVLHDLNYEETEETLCNHSERLAIAYGLISTP 692

Query: 752 PSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           P + +RI KNLR C +CH AIK+ISK+V REI++RD  RFHHF+DG CSCGD+W
Sbjct: 693 PGTTLRITKNLRACDNCHAAIKLISKLVSREIVVRDACRFHHFKDGACSCGDYW 746



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 124/506 (24%), Positives = 226/506 (44%), Gaps = 29/506 (5%)

Query: 35  STQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFAT 94
           +   C+ ST  P  F         YA+ +   I    L     I+ ++L  G     F  
Sbjct: 63  NKDDCNESTFKPDKF---------YASLIDDSIHKTHLNQ---IYAKLLVTGLQYGGFLI 110

Query: 95  NVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHE 154
             L+N    +  +  A KLFD+ P+ +   +   ++ Y+    F  A+ +++ +      
Sbjct: 111 AKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVS 170

Query: 155 LNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKV 214
            + F+F   LK   ++   E+   V   +++ G +S+ FV   L+  ++ CG +  A  V
Sbjct: 171 PDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAV 230

Query: 215 FDGLFNDCFE----------------EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTI 258
           F  L +                    EAL  FS+MR    +P+      VL+A   ++ +
Sbjct: 231 FGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDL 290

Query: 259 RVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARY 318
              KS HGC +K   E +  + ++L  LY K G +  AR  F ++    +I W+ MI+ Y
Sbjct: 291 EHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGY 350

Query: 319 AQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDV 378
            +   + +A+ELF  M+   + P+  T  S + ACA +  L+L   +   +      +DV
Sbjct: 351 VKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDV 410

Query: 379 FVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE 438
            V+ +L+D YAKCG ++ +  +F   P ++ V W+ M+VGY   G+  +++I+F  M + 
Sbjct: 411 IVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQA 470

Query: 439 QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDA 498
            V   +VT+  +L AC +   +E G  +         +        ++D+  + G +  A
Sbjct: 471 GVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQHYACVVDLLGRAGHLDRA 530

Query: 499 -RLVFDMMNDWNEVSWNAMISGYSMH 523
              V +M  +     W A++S   +H
Sbjct: 531 YNFVMNMPIEPGVSVWGALLSACKIH 556



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/389 (24%), Positives = 174/389 (44%), Gaps = 22/389 (5%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           S+   L++C     L+    +H Q+ + G   D+F  N L+ +Y K   +  A  +F  +
Sbjct: 175 SFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRL 234

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
            +R  +S+ + I GY  + Q +EA+ +FS + +     +  A  + L+    +   E   
Sbjct: 235 VDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGK 294

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF-------------- 223
            +  CV K+G +    +  +L   ++ CG V  AR  F+ + N                 
Sbjct: 295 SIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNG 354

Query: 224 --EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
             EEA+  F  M++   +P++ T    + AC  + ++ +A+        + +  D+ V  
Sbjct: 355 YAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNT 414

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           +L+D Y K G +  AR +F+ +P KDV+ WS M+  Y       +++ LF  MRQA V+P
Sbjct: 415 SLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSP 474

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           N  TFV +L AC     ++ G  +   +   G+         ++D+  + G ++ +    
Sbjct: 475 NDVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQHYACVVDLLGRAGHLDRAYNFV 534

Query: 402 AESPKRNHVT-WNTMIVG-----YVQLGE 424
              P    V+ W  ++       +V LGE
Sbjct: 535 MNMPIEPGVSVWGALLSACKIHRHVTLGE 563



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 140/268 (52%), Gaps = 2/268 (0%)

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
           NQI++ ++  GL    F+   L++  +  G +  + +LF + P  +   WN ++  Y + 
Sbjct: 92  NQIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRH 151

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
           G  G A+ M+++M    V     ++  VL+AC++L ALE G +VH    +  ++ DV V 
Sbjct: 152 GFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQ 211

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
           N L+ +YAKCG I  A  VF  + D   VSW ++ISGY+ +G   E L++F  M++   R
Sbjct: 212 NGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVR 271

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           P+ +  V VL A ++   LE G++     V   G+E   +   S+ SL  + GH+   A+
Sbjct: 272 PDWIALVSVLRAYTDVEDLEHGKS-IHGCVIKMGLECEFDLLISLTSLYAKCGHV-MVAR 329

Query: 603 LIEGIPFQPSVMIWRALLGACIIHNNVE 630
           L       PS++ W A++   + +   E
Sbjct: 330 LFFNQVENPSLIFWNAMISGYVKNGYAE 357


>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 840

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 242/608 (39%), Positives = 363/608 (59%), Gaps = 34/608 (5%)

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
           QM   GF      +  +L  C+     R  +  H   +KT Y   +++   L+ LYTK  
Sbjct: 233 QMALHGFNMKFENYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCD 292

Query: 292 EISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELF-------------------C 332
            + +A  +F+EMP+++V+ W+ MI+ Y+Q   +  A+ LF                    
Sbjct: 293 SLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLS 352

Query: 333 RMRQAFV--APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAK 390
              + +V   PN+FTF +VL +C +  G  LG QIHSL++++     VFV ++L+D+YAK
Sbjct: 353 NPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAK 412

Query: 391 CGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
            G++  +  +F   P+R+ V+   +I GY QLG   +A+ +F ++  E + +  VTY+ V
Sbjct: 413 DGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGV 472

Query: 451 LRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE 510
           L A + LAAL+ G QVH   +++     VV+ N+LIDMY+KCG++T +R +FD M +   
Sbjct: 473 LTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTV 532

Query: 511 VSWNAMISGYSMHGLSAEVLKVFDLMQQR-GWRPNNLTFVGVLSACSNGGLLEQGEAYFK 569
           +SWNAM+ GYS HG   EVLK+F LM++    +P+++T + VLS CS+GGL ++G   F 
Sbjct: 533 ISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFN 592

Query: 570 SMVA-NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
            M +    +EP +EHY  +V LLGR+G +++A + I+ +PF+P+  IW +LLGAC +H+N
Sbjct: 593 DMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSN 652

Query: 629 VEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIE 677
           V+IG  + Q +L+ EP +   +V+LSN+YA A  WE           K  +KEPG S IE
Sbjct: 653 VDIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGRSSIE 712

Query: 678 NQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVH 737
              ++H F A D SH     I   ++ L+   ++ GY+PDLS VL DV E++KE+ L  H
Sbjct: 713 LDQVLHTFHASDRSHPRREEICMKVKELSTSFKEVGYVPDLSCVLHDVDEEQKEKILLGH 772

Query: 738 SEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDG 797
           SEKLAL+F L   P S PIR+IKNLRICVDCH   K ISK+  RE+ +RD +RFH    G
Sbjct: 773 SEKLALSFGLIASPASVPIRVIKNLRICVDCHNFAKYISKVYGREVSLRDKNRFHRIVGG 832

Query: 798 CCSCGDFW 805
            CSC D+W
Sbjct: 833 KCSCEDYW 840



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 183/402 (45%), Gaps = 45/402 (11%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +Y   L  C+     +    +H  ++K      +F    L+ +Y K + L DA  +FDEM
Sbjct: 245 NYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEM 304

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLF-------------------STLHRE--GHELN 156
           PERN +S+   I  Y+      +A+ LF                   S  +R     E N
Sbjct: 305 PERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPN 364

Query: 157 PFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD 216
            F F   L    S     L   + + + KL ++ + FVG++L+D ++  G +  AR VF+
Sbjct: 365 EFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFE 424

Query: 217 GLFN----DCF------------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRV 260
            L       C             EEAL  F +++  G K N  T+  VL A  GL  + +
Sbjct: 425 CLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDL 484

Query: 261 AKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQ 320
            K  H   L++     + +  +L+D+Y+K G ++ +RRIF+ M ++ VI W+ M+  Y++
Sbjct: 485 GKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSK 544

Query: 321 TDLSIDAVELFCRMRQAF-VAPNQFTFVSVLQACA----TMEGLDLGNQIHSLVVRVGLL 375
                + ++LF  MR+   V P+  T ++VL  C+      +GL++ N + S  + V   
Sbjct: 545 HGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPK 604

Query: 376 SDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMI 416
            + +    ++D+  + GR+E + E   + P +     W +++
Sbjct: 605 MEHY--GCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLL 644



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 120/274 (43%), Gaps = 23/274 (8%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           +E N  ++AT L SC  +        IH  ++K      +F  + LL++Y K  ++ +A 
Sbjct: 361 TEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEAR 420

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
            +F+ +PER+ +S    I GY       EA+ LF  L  EG + N   +T  L  L  + 
Sbjct: 421 TVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLA 480

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF-------- 223
             +L   V   V +    S   +  +LID +S CG + ++R++FD ++            
Sbjct: 481 ALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLV 540

Query: 224 --------EEALNFFSQMR-AVGFKPNNFTFAFVLKACL--GLDT--IRVAKSAHGCALK 270
                    E L  F+ MR     KP++ T   VL  C   GL+   + +        ++
Sbjct: 541 GYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIE 600

Query: 271 TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
              +M+ Y  V  +DL  +SG +  A    ++MP
Sbjct: 601 VEPKMEHYGCV--VDLLGRSGRVEEAFEFIKKMP 632


>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
           pumila]
          Length = 710

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 241/624 (38%), Positives = 363/624 (58%), Gaps = 44/624 (7%)

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           AL  +  M ++G  PN++TF F+LK+C      +  +  HG  LK  +++DLY+  +L+ 
Sbjct: 87  ALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLIS 146

Query: 286 LYTKSGEISNARRI-------------------------------FEEMPKKDVIPWSFM 314
           +Y ++G + +A+++                               F+E+P KDV+ W+  
Sbjct: 147 MYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAX 206

Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL 374
           I+ YA+T    +A+ELF +M +  V P++ T V+VL ACA    ++LG Q+HS +   G 
Sbjct: 207 ISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGF 266

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
             ++ + NAL+D+Y+KCG +E +  LF     ++ ++WNT+I GY  +    +A+++F  
Sbjct: 267 GXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQD 326

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK--ANYDMDVVVANALIDMYAKC 492
           ML       +VT  S+L ACA L A++ G  +H    K          +  +LIDMYAKC
Sbjct: 327 MLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKC 386

Query: 493 GSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL 552
           G I  A+ VFD M + +  SWNAMI G++MHG +     +F  M++ G  P+++TFVG+L
Sbjct: 387 GDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLL 446

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
           SACS+ G+L+ G   F+SM  +Y + P +EHY  M+ L G +G   +A K+I  +  +P 
Sbjct: 447 SACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPD 506

Query: 613 VMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW--------- 663
            +IW +LL AC +H NVE+G   AQ+++  EPE+  ++VLLSNIYA A  W         
Sbjct: 507 GVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAERWNEVAKTRAL 566

Query: 664 --EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAV 721
             +K   K PG S IE   +VH F  GD  H     I GMLE + +   +AG++PD S V
Sbjct: 567 LNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEV 626

Query: 722 LRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQR 781
           L+++ E+ KE  L  HSEKLA+AF L    P + + I+KNLR+C +CH A K+ISKI +R
Sbjct: 627 LQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKR 686

Query: 782 EIIIRDVHRFHHFQDGCCSCGDFW 805
           EII RD  RFHHF+DG CSC D+W
Sbjct: 687 EIIARDRTRFHHFRDGECSCNDYW 710



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 139/560 (24%), Positives = 242/560 (43%), Gaps = 88/560 (15%)

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYV---KLNRLPDATKLFDEMPERNTISFVTT 128
           LQ+   IH Q++K G     +A + LL   V     + LP A  +FD + E   + + T 
Sbjct: 15  LQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIWNTM 74

Query: 129 IQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGH 188
            +G+ +SS  V A+ L+  +   G   N + F   LK        +    +   V K G 
Sbjct: 75  FRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGF 134

Query: 189 DSNAFVGTALIDAFSVCGCVEFARKVFDG---------------------------LFND 221
           D + ++ T+LI  +   G +E A+KV D                            +F++
Sbjct: 135 DLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDE 194

Query: 222 C--------------------FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVA 261
                                ++EAL  F +M     +P+  T   VL AC    +I + 
Sbjct: 195 IPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELG 254

Query: 262 KSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQT 321
           +  H       +  +L +  AL+DLY+K GE+  A  +F+ +  KDVI W+ +I  Y   
Sbjct: 255 RQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHM 314

Query: 322 DLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR--VGLLSDVF 379
           +L  +A+ LF  M ++   PN  T +S+L ACA +  +D+G  IH  + +   G+ +   
Sbjct: 315 NLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASS 374

Query: 380 VSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ 439
           +  +L+D+YAKCG +E + ++F     R+  +WN MI G+   G    A  +FS+M +  
Sbjct: 375 LRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNG 434

Query: 440 VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR 499
           +   ++T+  +L AC+    L+ G  +     +                        D +
Sbjct: 435 IEPDDITFVGLLSACSHSGMLDLGRHIFRSMTR------------------------DYK 470

Query: 500 LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGG 559
           L+  + +      +  MI      GL  E  K+ + M+     P+ + +  +L AC   G
Sbjct: 471 LMPKLEH------YGCMIDLXGHSGLFKEAEKMINTMEM---EPDGVIWCSLLKACKMHG 521

Query: 560 LLEQGEAYFKSMVANYGIEP 579
            +E GE+Y ++++    IEP
Sbjct: 522 NVELGESYAQNLIK---IEP 538



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/438 (25%), Positives = 205/438 (46%), Gaps = 45/438 (10%)

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISN---ARRIFEEMP 304
           +L  C  L ++R+    H   +KT      Y    LL+    S        A  +F+ + 
Sbjct: 8   LLHXCKTLQSLRII---HAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQ 64

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
           +  ++ W+ M   +A +   + A++L+  M    + PN +TF  +L++CA       G Q
Sbjct: 65  EPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQ 124

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV-------------------------- 398
           +H  V++ G   D+++  +L+ +Y + GR+E++                           
Sbjct: 125 LHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGX 184

Query: 399 -----ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
                ++F E P ++ V+WN  I GY + G   +A+ +F KM++  V   E T  +VL A
Sbjct: 185 IESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSA 244

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
           CA   ++E G QVH       +  ++ + NALID+Y+KCG +  A  +F  +++ + +SW
Sbjct: 245 CAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISW 304

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE---AYFKS 570
           N +I GY+   L  E L +F  M + G +PN++T + +LSAC++ G ++ G     Y   
Sbjct: 305 NTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDK 364

Query: 571 MVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN--N 628
            +   G+       TS++ +  + G ++ A ++ + +    S+  W A++    +H   N
Sbjct: 365 RLK--GVTNASSLRTSLIDMYAKCGDIEAAQQVFDSM-LNRSLSSWNAMIFGFAMHGRAN 421

Query: 629 VEIGRLSAQHILDFEPED 646
                 S       EP+D
Sbjct: 422 AAFDIFSRMRKNGIEPDD 439



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 201/458 (43%), Gaps = 71/458 (15%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT--- 111
           NS+++   L+SC ++   +    +H QVLK G  LDL+    L+++YV+  RL DA    
Sbjct: 102 NSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVX 161

Query: 112 ----------------------------KLFDEMPERNTISFVTTIQGYTVSSQFVEAVG 143
                                       K+FDE+P ++ +S+   I GY  +  + EA+ 
Sbjct: 162 DKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALE 221

Query: 144 LFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFS 203
           LF  + +     +       L      G  EL   V + +   G   N  +  ALID +S
Sbjct: 222 LFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYS 281

Query: 204 VCGCVEFARKVFDGLFN----------------DCFEEALNFFSQMRAVGFKPNNFTFAF 247
            CG +E A  +F GL N                + ++EAL  F  M   G KPN+ T   
Sbjct: 282 KCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLS 341

Query: 248 VLKACLGLDTIRVAKSAH---GCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
           +L AC  L  I + +  H      LK        +  +L+D+Y K G+I  A+++F+ M 
Sbjct: 342 ILSACAHLGAIDIGRWIHVYIDKRLKGVTNAS-SLRTSLIDMYAKCGDIEAAQQVFDSML 400

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
            + +  W+ MI  +A    +  A ++F RMR+  + P+  TFV +L AC+    LDLG  
Sbjct: 401 NRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRH 460

Query: 365 I-HSLVVRVGLLSDVFVSNALMDVYAKCG------RMENSVELFAESPKRNHVTWNTMIV 417
           I  S+     L+  +     ++D+    G      +M N++E+  +      V W +++ 
Sbjct: 461 IFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDG-----VIWCSLLK 515

Query: 418 -----GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
                G V+LGE     ++    +E + P + V  S++
Sbjct: 516 ACKMHGNVELGESYAQNLI---KIEPENPGSYVLLSNI 550


>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
 gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
          Length = 805

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 256/752 (34%), Positives = 387/752 (51%), Gaps = 43/752 (5%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D +  + L+ +Y++   L  A  +F ++  ++ + +   I  Y        A+ LF  + 
Sbjct: 61  DGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRIL 120

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
           +EG  L+   F + L    S  +      +  C  + G      V +AL+  +  CG + 
Sbjct: 121 QEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLR 180

Query: 210 FARKVFDGLF-----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKAC 252
            A  +F  L                  N    EAL  F +M  +G  P+  TF  V KAC
Sbjct: 181 DANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKAC 240

Query: 253 LGLDTIRVA--KSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIP 310
               ++R +  K  H C  +T    D+ VA AL++ Y + GEI  AR+ F EMP+++ + 
Sbjct: 241 SSSPSLRASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAVS 300

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV 370
           W+ MIA + Q    + AVE F  M    V P + T  + L+ C   E L +   + ++  
Sbjct: 301 WTSMIAAFTQIG-HLLAVETFHAMLLEGVVPTRSTLFAALEGC---EDLRVARLVEAIAQ 356

Query: 371 RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT-----MIVGYVQLGEV 425
            +G+++DV +   L+  YA+C   E+++ +F+    R    W+      MI  Y Q  + 
Sbjct: 357 EIGVVTDVAIVTDLVMAYARCDGQEDAIRVFS---AREEGEWDAALVTAMIAVYAQCRDR 413

Query: 426 GKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVH-CLTVKANYDMDVVVANA 484
                ++   +E  +    + Y + L ACASLAAL  G Q+H C+      D DV + NA
Sbjct: 414 RSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNA 473

Query: 485 LIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPN 544
           ++ MY +CGS+ DAR  FD M   +E+SWNAM+S  + HG   +   +F  M Q G+   
Sbjct: 474 IVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAE 533

Query: 545 NLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLI 604
            + F+ +LSAC++ GL++ G  +F +M  ++G+ P  EHY  MV LLGR G L  A  ++
Sbjct: 534 RIAFLNLLSACAHAGLVKAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIV 593

Query: 605 EGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE 664
           + +P  P    W AL+GAC I+ + E GR +A+ +L+   +  A +V L NIY+ A  W+
Sbjct: 594 QAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLELRADHTAAYVALCNIYSAAGRWD 653

Query: 665 KAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAG 713
            AA+           K PG+S IE +  VH F   D SH     I   LE +     +AG
Sbjct: 654 DAAAVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIERAG 713

Query: 714 YIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIK 773
           Y      VL DV E++KE+ L  HSEKLA+AF +   P  S +R+IKNLR+CVDCH A K
Sbjct: 714 YRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHNASK 773

Query: 774 IISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            ISK+  REI++RDV RFHHF+DG CSCGD+W
Sbjct: 774 FISKVFGREIVVRDVRRFHHFKDGACSCGDYW 805


>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 975

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 270/788 (34%), Positives = 418/788 (53%), Gaps = 32/788 (4%)

Query: 50  SVSEF--NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRL 107
           S++EF  ++ +    +++C+   D++    +H   LK     D+F  N L+ +Y K   +
Sbjct: 188 SLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFV 247

Query: 108 PDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFT--AFLK 165
             A K+FD+MP+RN +S+ + +     +  F E+ GLF  L      L P   T    + 
Sbjct: 248 ESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIP 307

Query: 166 VLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--------- 216
           +    G   L         KLG      V ++L+D +S CG +  AR +FD         
Sbjct: 308 LCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDTNEKNVISW 367

Query: 217 -----GLFNDC-FEEALNFFSQMRAVG-FKPNNFTFAFVLKACLGLDTIRVAKSAHGCAL 269
                G   D  F  A     +M+     K N  T   VL  C         K  HG AL
Sbjct: 368 NSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYAL 427

Query: 270 KTCY-EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAV 328
           +  + + D  VA A +  Y K G +  A  +F  M  K V  W+ +I  + Q      A+
Sbjct: 428 RHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKAL 487

Query: 329 ELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVY 388
           +L+  MR + + P+ FT  S+L ACA ++ L  G +IH  ++R G   D F+  +L+ +Y
Sbjct: 488 DLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLY 547

Query: 389 AKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYS 448
            +CG++  +   F    ++N V WNTMI G+ Q      A+ MF +ML  ++   E++  
Sbjct: 548 VQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISII 607

Query: 449 SVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDW 508
             L AC+ ++AL  G ++HC  VK++      V  +LIDMYAKCG +  ++ +FD ++  
Sbjct: 608 GALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLK 667

Query: 509 NEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYF 568
            EV+WN +I+GY +HG   + +++F  MQ  G+RP+++TF+ +L+AC++ GL+ +G  Y 
Sbjct: 668 GEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYL 727

Query: 569 KSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
             M + +GI+P +EHY  +V +LGRAG L++A +L+  +P +P   IW +LL +C  + +
Sbjct: 728 GQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRD 787

Query: 629 VEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEK-----------AASKEPGLSWIE 677
           ++IG   A  +L+  P+    +VL+SN YA    W++              K+ G SWIE
Sbjct: 788 LDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIE 847

Query: 678 NQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVH 737
             G V  F  GD S      I+     L  K  K GY PD S VL ++ EDEK + L  H
Sbjct: 848 IGGKVSRFLVGDESLLQSMKIQQTWIELEKKINKIGYKPDTSCVLHELEEDEKIKILRNH 907

Query: 738 SEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDG 797
           SEKLA++F L      + +R+ KNLRICVDCH AIK++SKI +REII+RD  RFHHF++G
Sbjct: 908 SEKLAISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKIDKREIIVRDNKRFHHFKNG 967

Query: 798 CCSCGDFW 805
            CSCGD+W
Sbjct: 968 FCSCGDYW 975



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 132/452 (29%), Positives = 235/452 (51%), Gaps = 32/452 (7%)

Query: 196 TALIDAFSVC-----GCVEFARKVFDGLF-----------NDCFEEALNFFSQMRAVG-F 238
           T L+  +S+C      C+ F       LF           N  F +A+  F +M ++  F
Sbjct: 133 TRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEF 192

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
            P+NFT   V+KAC+G+  +R+ ++ HG ALKT    D++V  AL+ +Y K G + +A +
Sbjct: 193 VPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVK 252

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA--FVAPNQFTFVSVLQACATM 356
           +F++MP+++++ W+ ++    +  +  ++  LF  +      + P+  T V+V+  CA  
Sbjct: 253 VFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQ 312

Query: 357 EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMI 416
             + LG   H L +++GL  ++ V+++L+D+Y+KCG +  +  LF ++ ++N ++WN+MI
Sbjct: 313 GEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLF-DTNEKNVISWNSMI 371

Query: 417 VGYVQLGEVGKAMIMFSKM-LEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY 475
            GY +  +   A  +  KM +E++V   EVT  +VL  C          ++H   ++  +
Sbjct: 372 GGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGF 431

Query: 476 -DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
              D +VANA +  YAKCGS+  A  VF  M      SWNA+I G+  +G   + L ++ 
Sbjct: 432 IQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYL 491

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE----PCIEHYTSMVSL 590
           LM+  G  P+  T   +LSAC+    L  G+    SM+ N G E     CI    S+VSL
Sbjct: 492 LMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRN-GFELDEFICI----SLVSL 546

Query: 591 LGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
             + G +  A    + +  + +++ W  ++  
Sbjct: 547 YVQCGKILLAKLFFDNME-EKNLVCWNTMING 577



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 135/279 (48%), Gaps = 9/279 (3%)

Query: 349 VLQACATMEGLDLGNQIHSLV-VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKR 407
           +LQ C   + +++G +IH+ +       +DV +   L+ +Y+ C    +S  +F  S ++
Sbjct: 99  LLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRK 158

Query: 408 NHVTWNTMIVGYVQLGEVGKAMIMFSKM--LEEQVPATEVTYSSVLRACASLAALEPGMQ 465
           N   WN ++ GY++      A+ +F +M  L E VP    T   V++AC  +  +  G  
Sbjct: 159 NLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVP-DNFTLPCVIKACVGVYDVRLGEA 217

Query: 466 VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGL 525
           VH   +K     DV V NALI MY K G +  A  VFD M   N VSWN+++     +G+
Sbjct: 218 VHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGV 277

Query: 526 SAEVLKVFD--LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEH 583
             E   +F   L    G  P+  T V V+  C+  G +  G   F  +    G+   ++ 
Sbjct: 278 FEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLG-MVFHGLALKLGLCGELKV 336

Query: 584 YTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
            +S++ +  + G+L +A  L +    + +V+ W +++G 
Sbjct: 337 NSSLLDMYSKCGYLCEARVLFD--TNEKNVISWNSMIGG 373



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 91/177 (51%), Gaps = 4/177 (2%)

Query: 450 VLRACASLAALEPGMQVH-CLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDW 508
           +L+ C     +E G ++H  ++   ++  DVV+   L+ MY+ C S  D+ LVF+     
Sbjct: 99  LLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRK 158

Query: 509 NEVSWNAMISGYSMHGLSAEVLKVF-DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAY 567
           N   WNA++SGY  + L  + + VF +++    + P+N T   V+ AC     +  GEA 
Sbjct: 159 NLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAV 218

Query: 568 FKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACI 624
               +    +        +++++ G+ G ++ A K+ + +P Q +++ W +++ AC+
Sbjct: 219 HGFALKTKVLSDVFVG-NALIAMYGKFGFVESAVKVFDKMP-QRNLVSWNSVMYACL 273


>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
           1
 gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
 gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 684

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 242/599 (40%), Positives = 346/599 (57%), Gaps = 13/599 (2%)

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           N  F  AL  F +MR  G  PN+FTF    KA   L      K  H  A+K    +D++V
Sbjct: 86  NGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFV 145

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
             +  D+Y K+    +AR++F+E+P++++  W+  I+         +A+E F   R+   
Sbjct: 146 GCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDG 205

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
            PN  TF + L AC+    L+LG Q+H LV+R G  +DV V N L+D Y KC ++ +S  
Sbjct: 206 HPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEI 265

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +F E   +N V+W +++  YVQ  E  KA +++ +  ++ V  ++   SSVL ACA +A 
Sbjct: 266 IFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAG 325

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
           LE G  +H   VKA  +  + V +AL+DMY KCG I D+   FD M + N V+ N++I G
Sbjct: 326 LELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGG 385

Query: 520 YSMHGLSAEVLKVFDLMQQRGW--RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
           Y+  G     L +F+ M  RG    PN +TFV +LSACS  G +E G   F SM + YGI
Sbjct: 386 YAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGI 445

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQ 637
           EP  EHY+ +V +LGRAG +++A + I+ +P QP++ +W AL  AC +H   ++G L+A+
Sbjct: 446 EPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAE 505

Query: 638 HILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFR 686
           ++   +P+D   HVLLSN +A A  W +A +           K  G SWI  +  VH F+
Sbjct: 506 NLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQ 565

Query: 687 AGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFA 746
           A D SH     I+  L  L  +   AGY PDL   L D+ E+EK   +  HSEKLALAF 
Sbjct: 566 AKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFG 625

Query: 747 LFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           L  +P S PIRI KNLRIC DCH+  K +S  V+REII+RD +RFH F+DG CSC D+W
Sbjct: 626 LLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 142/487 (29%), Positives = 231/487 (47%), Gaps = 29/487 (5%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLD----LFATNVLLNVYVKLNRLPDATKLFDEMP 118
           L++ I    ++    +H +++K    LD     F  N L+N+Y KL+    A  +    P
Sbjct: 13  LKNAISASSMRLGRVVHARIVKT---LDSPPPPFLANYLINMYSKLDHPESARLVLRLTP 69

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
            RN +S+ + I G   +  F  A+  F  + REG   N F F    K + S+        
Sbjct: 70  ARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQ 129

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFE-------------- 224
           + A   K G   + FVG +  D +      + ARK+FD +     E              
Sbjct: 130 IHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGR 189

Query: 225 --EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
             EA+  F + R +   PN+ TF   L AC     + +    HG  L++ ++ D+ V   
Sbjct: 190 PREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNG 249

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+D Y K  +I ++  IF EM  K+ + W  ++A Y Q      A  L+ R R+  V  +
Sbjct: 250 LIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETS 309

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
            F   SVL ACA M GL+LG  IH+  V+  +   +FV +AL+D+Y KCG +E+S + F 
Sbjct: 310 DFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFD 369

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATE--VTYSSVLRACASLAAL 460
           E P++N VT N++I GY   G+V  A+ +F +M       T   +T+ S+L AC+   A+
Sbjct: 370 EMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAV 429

Query: 461 EPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDARLVFDMMNDWNEVS-WNAMI 517
           E GM++   ++++ Y ++    +   ++DM  + G +  A      M     +S W A+ 
Sbjct: 430 ENGMKIFD-SMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQ 488

Query: 518 SGYSMHG 524
           +   MHG
Sbjct: 489 NACRMHG 495



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 104/392 (26%), Positives = 193/392 (49%), Gaps = 11/392 (2%)

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTC-YEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
              +LK  +   ++R+ +  H   +KT       ++A  L+++Y+K     +AR +    
Sbjct: 9   LGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLT 68

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
           P ++V+ W+ +I+  AQ      A+  F  MR+  V PN FTF    +A A++     G 
Sbjct: 69  PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGK 128

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
           QIH+L V+ G + DVFV  +  D+Y K    +++ +LF E P+RN  TWN  I   V  G
Sbjct: 129 QIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDG 188

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN 483
              +A+  F +          +T+ + L AC+    L  GMQ+H L +++ +D DV V N
Sbjct: 189 RPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCN 248

Query: 484 ALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRP 543
            LID Y KC  I  + ++F  M   N VSW ++++ Y  +    +   ++   ++     
Sbjct: 249 GLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVET 308

Query: 544 NNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY----TSMVSLLGRAGHLDK 599
           ++     VLSAC+    LE G +     +  + ++ C+E      +++V + G+ G ++ 
Sbjct: 309 SDFMISSVLSACAGMAGLELGRS-----IHAHAVKACVERTIFVGSALVDMYGKCGCIED 363

Query: 600 AAKLIEGIPFQPSVMIWRALLGACIIHNNVEI 631
           + +  + +P + +++   +L+G       V++
Sbjct: 364 SEQAFDEMP-EKNLVTRNSLIGGYAHQGQVDM 394



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 116/280 (41%), Gaps = 31/280 (11%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           NS ++   L +C     L   M +H  VL+ G   D+   N L++ Y K  ++  +  +F
Sbjct: 208 NSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIF 267

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
            EM  +N +S+ + +  Y  + +  +A  L+    ++  E + F  ++ L     M   E
Sbjct: 268 TEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLE 327

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------- 218
           L   + A   K   +   FVG+AL+D +  CGC+E + + FD +                
Sbjct: 328 LGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYA 387

Query: 219 FNDCFEEALNFFSQM--RAVGFKPNNFTFAFVLKACL-------GLDTIRVAKSAHGCAL 269
                + AL  F +M  R  G  PN  TF  +L AC        G+      +S +G   
Sbjct: 388 HQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYG--- 444

Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
               E        ++D+  ++G +  A    ++MP +  I
Sbjct: 445 ---IEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTI 481


>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
          Length = 673

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 249/624 (39%), Positives = 362/624 (58%), Gaps = 44/624 (7%)

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           AL  +  M ++G  PN++TF F+LK+C         +  HG  LK  YE DLYV  +L+ 
Sbjct: 50  ALKLYVVMISLGLLPNSYTFPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLIS 109

Query: 286 LYTK-------------------------------SGEISNARRIFEEMPKKDVIPWSFM 314
           +Y +                               SG I +A+ +F+E+P KDV+ W+ M
Sbjct: 110 MYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAM 169

Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL 374
           I+ YA+T    +A+ELF  M +  V P++ T V+VL ACA    ++LG Q+HS +   G 
Sbjct: 170 ISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGF 229

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
            S++ + NAL+D+Y+KCG++E +  LF     ++ V+WNT+I GY  +    +A+++F +
Sbjct: 230 GSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQE 289

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV--VANALIDMYAKC 492
           ML       +VT  S+L ACA L A++ G  +H    K   D+     +  +LIDMYAKC
Sbjct: 290 MLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKC 349

Query: 493 GSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL 552
           G I  A  VF+ M   +  SWNAMI G++MHG +     +F  M++ G  P+++TFVG+L
Sbjct: 350 GDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLL 409

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
           SACS+ G L+ G   FKSM  +Y I P +EHY  M+ LLG +G   +A ++I+ +P +P 
Sbjct: 410 SACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPD 469

Query: 613 VMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA----- 667
            +IW +LL AC  H N+E+    A++++  EPE+  ++VLLSNIYA A  W++ A     
Sbjct: 470 GVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRAL 529

Query: 668 ------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAV 721
                  K PG S IE    VH F  GD  H     I GMLE +     +AG++PD S V
Sbjct: 530 LNGKGMKKVPGCSSIEIDSEVHEFIVGDKLHPRNREIYGMLEEMEALLEEAGFVPDTSEV 589

Query: 722 LRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQR 781
           L+++ E+ KE  L  HSEKLA+AF L    P + + I+KNLR+C +CH A K++SKI +R
Sbjct: 590 LQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLVSKIYKR 649

Query: 782 EIIIRDVHRFHHFQDGCCSCGDFW 805
           EII RD  RFHHF+DG CSC DFW
Sbjct: 650 EIIARDRTRFHHFRDGVCSCNDFW 673



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 190/384 (49%), Gaps = 39/384 (10%)

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           +F  + + + + W+ M+  YA +   + A++L+  M    + PN +TF  +L++CA  + 
Sbjct: 22  VFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKA 81

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN---------------------- 396
            + G QIH  V+++G   D++V  +L+ +YA+ GR+E+                      
Sbjct: 82  FEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITG 141

Query: 397 ---------SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTY 447
                    + E+F E P ++ V+WN MI GY + G   +A+ +F +M++  V   E T 
Sbjct: 142 YASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTM 201

Query: 448 SSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND 507
            +VL ACA   ++E G QVH       +  ++ + NALID+Y+KCG +  A  +F+ ++ 
Sbjct: 202 VTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSC 261

Query: 508 WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE-- 565
            + VSWN +I GY+   L  E L +F  M + G  PN++T V +L AC++ G ++ G   
Sbjct: 262 KDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWI 321

Query: 566 -AYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACI 624
             Y    + +    P +   TS++ +  + G ++ A ++   +    S+  W A++    
Sbjct: 322 HVYIDKKLKDVTNAPSLR--TSLIDMYAKCGDIEAAHQVFNSM-LHKSLSSWNAMIFGFA 378

Query: 625 IHNNVEIG--RLSAQHILDFEPED 646
           +H     G    S       EP+D
Sbjct: 379 MHGRANAGFDLFSRMRKNGIEPDD 402



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 124/495 (25%), Positives = 209/495 (42%), Gaps = 58/495 (11%)

Query: 10  FSCKQLTHQSKINAWLRGLSAQAALSTQQCSNSTTTPITFSVSEF-NSHSYATSLQSCIQ 68
           F+  Q  +Q   N  LRG     ALS+   S      +  S+    NS+++   L+SC +
Sbjct: 23  FATIQEPNQLIWNTMLRGY----ALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78

Query: 69  NDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK---------------- 112
           +   +    IH  VLK G   DL+    L+++Y +  RL DA K                
Sbjct: 79  SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138

Query: 113 ---------------LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNP 157
                          +FDE+P ++ +S+   I GY  +  + EA+ LF  + +     + 
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDE 198

Query: 158 FAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG 217
                 L         EL   V + +   G  SN  +  ALID +S CG VE A  +F+G
Sbjct: 199 GTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEG 258

Query: 218 L----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVA 261
           L                  + ++EAL  F +M   G  PN+ T   +L AC  L  I + 
Sbjct: 259 LSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIG 318

Query: 262 KSAHGCALKTCYEMD--LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYA 319
           +  H    K   ++     +  +L+D+Y K G+I  A ++F  M  K +  W+ MI  +A
Sbjct: 319 RWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFA 378

Query: 320 QTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI-HSLVVRVGLLSDV 378
               +    +LF RMR+  + P+  TFV +L AC+    LDLG  I  S+     +   +
Sbjct: 379 MHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKL 438

Query: 379 FVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMIVGYVQLG--EVGKAMIMFSKM 435
                ++D+    G  + + E+    P + + V W +++    + G  E+ ++       
Sbjct: 439 EHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMK 498

Query: 436 LEEQVPATEVTYSSV 450
           +E + P + V  S++
Sbjct: 499 VEPENPGSYVLLSNI 513



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 122/257 (47%), Gaps = 33/257 (12%)

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           ++ +FA   + N + WNTM+ GY    +   A+ ++  M+   +     T+  +L++CA 
Sbjct: 19  AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFD------------- 503
             A E G Q+H   +K  Y+ D+ V  +LI MYA+ G + DA  VFD             
Sbjct: 79  SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138

Query: 504 ---------------MMNDW---NEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNN 545
                          M ++    + VSWNAMISGY+  G   E L++F  M +   RP+ 
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDE 198

Query: 546 LTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
            T V VLSAC+    +E G     S + ++G    ++   +++ L  + G ++ A  L E
Sbjct: 199 GTMVTVLSACAQSRSVELGRQ-VHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFE 257

Query: 606 GIPFQPSVMIWRALLGA 622
           G+  +  V+ W  L+G 
Sbjct: 258 GLSCK-DVVSWNTLIGG 273



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 82/361 (22%), Positives = 149/361 (41%), Gaps = 69/361 (19%)

Query: 61  TSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPER 120
           T L +C Q+  ++    +H  +   G   +L   N L+++Y K  ++  A  LF+ +  +
Sbjct: 203 TVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCK 262

Query: 121 NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVF 180
           + +S+ T I GYT  + + EA+ LF  + R G   N     + L     +G  ++   + 
Sbjct: 263 DVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIH 322

Query: 181 ACVYKLGHD-SNA-FVGTALIDAFSVCGCVEFARKVFDGLFNDCFEE------------- 225
             + K   D +NA  + T+LID ++ CG +E A +VF+ + +                  
Sbjct: 323 VYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGR 382

Query: 226 ---ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
                + FS+MR  G +P++ TF  +L AC                              
Sbjct: 383 ANAGFDLFSRMRKNGIEPDDITFVGLLSAC------------------------------ 412

Query: 283 LLDLYTKSGEISNARRIFEEMPKK-DVIP----WSFMIARYAQTDLSIDAVELFCRMRQA 337
                + SG++   R IF+ M +  D+ P    +  MI     + L  +A E+   M   
Sbjct: 413 -----SHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMP-- 465

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG--------LLSDVFVSNALMDVYA 389
            + P+   + S+L+AC     L+L       +++V         LLS+++ +    D  A
Sbjct: 466 -MEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVA 524

Query: 390 K 390
           K
Sbjct: 525 K 525


>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
          Length = 861

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 266/810 (32%), Positives = 410/810 (50%), Gaps = 79/810 (9%)

Query: 51  VSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDA 110
           +   N   Y ++L +C    +L     +H Q    G   ++   N L+  Y     L DA
Sbjct: 76  LQRLNPKFYISALVNC---RNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDA 132

Query: 111 TKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSM 170
             LFD M  R+++S+   + G+     ++   G F  L R G   + +            
Sbjct: 133 YGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTL---------- 182

Query: 171 GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-------------- 216
                 P V      L +     +  AL+D +  C  +E AR +FD              
Sbjct: 183 ------PFVIRACRDLKN-----LQMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMI 231

Query: 217 GLFNDCFE--EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
           G + +C +  E+L  F +MR  G  P+      V+ AC  L  +  A+       +  ++
Sbjct: 232 GGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQ 291

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
           +D+ +  A++D+Y K G + +AR IF+ M +K+VI WS MIA Y        A++LF  M
Sbjct: 292 LDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMM 351

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
             + + P++ T  S+L AC     L    Q+H+     G+L ++ V+N L+  Y+    +
Sbjct: 352 LSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRAL 411

Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGE----------------------------VG 426
           +++  LF     R+ V+W+ M+ G+ ++G+                              
Sbjct: 412 DDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNAN 471

Query: 427 KAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALI 486
           +++++F KM EE V   +V   +V+ ACA L A+     +     +  + +DV++  A+I
Sbjct: 472 ESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMI 531

Query: 487 DMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNL 546
           DM+AKCG +  AR +FD M + N +SW+AMI+ Y  HG   + L +F +M + G  PN +
Sbjct: 532 DMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKI 591

Query: 547 TFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEG 606
           T V +L ACS+ GL+E+G  +F  M  +Y +   ++HYT +V LLGRAG LD+A KLIE 
Sbjct: 592 TLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIES 651

Query: 607 IPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKA 666
           +  +    +W A LGAC  H +V +   +A  +L+ +P++   ++LLSNIYA A  WE  
Sbjct: 652 MTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDV 711

Query: 667 A-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYI 715
           A            K PG +WIE     H F  GDT+H     I  ML+ L  K    GY+
Sbjct: 712 AKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYV 771

Query: 716 PDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKII 775
           PD + VL DV E+ K   L+ HSEKLA+AF L   P  +PIRIIKNLR+C DCHT  K++
Sbjct: 772 PDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLV 831

Query: 776 SKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           S I  R II+RD +RFHHF++G CSCGD+W
Sbjct: 832 SAITGRVIIVRDANRFHHFKEGACSCGDYW 861



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/323 (23%), Positives = 146/323 (45%), Gaps = 28/323 (8%)

Query: 308 VIPW--SFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
           VIP   S +  ++ QT L++   E            N   ++S L  C  +  +    Q+
Sbjct: 44  VIPIVESIIETQFRQTSLNLHNREEESSKFHFLQRLNPKFYISALVNCRNLTQV---RQV 100

Query: 366 HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEV 425
           H+     G+L ++ V+N L+  Y+    ++++  LF     R+ V+W+ M+ G+ ++G+ 
Sbjct: 101 HAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDY 160

Query: 426 GKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANAL 485
                 F +++         T   V+RAC  L  L+                      AL
Sbjct: 161 INCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQM---------------------AL 199

Query: 486 IDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNN 545
           +DMY KC  I DAR +FD M + + V+W  MI GY+  G + E L +F+ M++ G  P+ 
Sbjct: 200 VDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDK 259

Query: 546 LTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
           +  V V+ AC+  G + +        +     +  +   T+M+ +  + G ++ A ++ +
Sbjct: 260 VAMVTVVFACAKLGAMHKARI-IDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFD 318

Query: 606 GIPFQPSVMIWRALLGACIIHNN 628
            +  + +V+ W A++ A   H  
Sbjct: 319 RME-EKNVISWSAMIAAYGYHGQ 340


>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
          Length = 634

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 242/599 (40%), Positives = 346/599 (57%), Gaps = 13/599 (2%)

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           N  F  AL  F +MR  G  PN+FTF    KA   L      K  H  A+K    +D++V
Sbjct: 36  NGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFV 95

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
             +  D+Y K+    +AR++F+E+P++++  W+  I+         +A+E F   R+   
Sbjct: 96  GCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDG 155

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
            PN  TF + L AC+    L+LG Q+H LV+R G  +DV V N L+D Y KC ++ +S  
Sbjct: 156 HPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEI 215

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +F E   +N V+W +++  YVQ  E  KA +++ +  ++ V  ++   SSVL ACA +A 
Sbjct: 216 IFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAG 275

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
           LE G  +H   VKA  +  + V +AL+DMY KCG I D+   FD M + N V+ N++I G
Sbjct: 276 LELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGG 335

Query: 520 YSMHGLSAEVLKVFDLMQQRGW--RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
           Y+  G     L +F+ M  RG    PN +TFV +LSACS  G +E G   F SM + YGI
Sbjct: 336 YAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGI 395

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQ 637
           EP  EHY+ +V +LGRAG +++A + I+ +P QP++ +W AL  AC +H   ++G L+A+
Sbjct: 396 EPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAE 455

Query: 638 HILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFR 686
           ++   +P+D   HVLLSN +A A  W +A +           K  G SWI  +  VH F+
Sbjct: 456 NLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQ 515

Query: 687 AGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFA 746
           A D SH     I+  L  L  +   AGY PDL   L D+ E+EK   +  HSEKLALAF 
Sbjct: 516 AKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFG 575

Query: 747 LFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           L  +P S PIRI KNLRIC DCH+  K +S  V+REII+RD +RFH F+DG CSC D+W
Sbjct: 576 LLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 634



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 132/446 (29%), Positives = 212/446 (47%), Gaps = 22/446 (4%)

Query: 100 VYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFA 159
           +Y KL+    A  +    P RN +S+ + I G   +  F  A+  F  + REG   N F 
Sbjct: 1   MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60

Query: 160 FTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF 219
           F    K + S+        + A   K G   + FVG +  D +      + ARK+FD + 
Sbjct: 61  FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120

Query: 220 NDCFE----------------EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKS 263
               E                EA+  F + R +   PN+ TF   L AC     + +   
Sbjct: 121 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQ 180

Query: 264 AHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDL 323
            HG  L++ ++ D+ V   L+D Y K  +I ++  IF EM  K+ + W  ++A Y Q   
Sbjct: 181 LHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHE 240

Query: 324 SIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNA 383
              A  L+ R R+  V  + F   SVL ACA M GL+LG  IH+  V+  +   +FV +A
Sbjct: 241 DEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSA 300

Query: 384 LMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPAT 443
           L+D+Y KCG +E+S + F E P++N VT N++I GY   G+V  A+ +F +M       T
Sbjct: 301 LVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPT 360

Query: 444 E--VTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDAR 499
              +T+ S+L AC+   A+E GM++   ++++ Y ++    +   ++DM  + G +  A 
Sbjct: 361 PNYMTFVSLLSACSRAGAVENGMKIF-DSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAY 419

Query: 500 LVFDMMNDWNEVS-WNAMISGYSMHG 524
                M     +S W A+ +   MHG
Sbjct: 420 EFIKKMPIQPTISVWGALQNACRMHG 445



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 174/350 (49%), Gaps = 10/350 (2%)

Query: 286 LYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFT 345
           +Y+K     +AR +    P ++V+ W+ +I+  AQ      A+  F  MR+  V PN FT
Sbjct: 1   MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           F    +A A++     G QIH+L V+ G + DVFV  +  D+Y K    +++ +LF E P
Sbjct: 61  FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
           +RN  TWN  I   V  G   +A+  F +          +T+ + L AC+    L  GMQ
Sbjct: 121 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQ 180

Query: 466 VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGL 525
           +H L +++ +D DV V N LID Y KC  I  + ++F  M   N VSW ++++ Y  +  
Sbjct: 181 LHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHE 240

Query: 526 SAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY- 584
             +   ++   ++     ++     VLSAC+    LE G +     +  + ++ C+E   
Sbjct: 241 DEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRS-----IHAHAVKACVERTI 295

Query: 585 ---TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEI 631
              +++V + G+ G ++ + +  + +P + +++   +L+G       V++
Sbjct: 296 FVGSALVDMYGKCGCIEDSEQAFDEMP-EKNLVTRNSLIGGYAHQGQVDM 344



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 169/376 (44%), Gaps = 27/376 (7%)

Query: 74  TAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYT 133
           T   IH   +K G  LD+F      ++Y K     DA KLFDE+PERN  ++   I    
Sbjct: 76  TGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSV 135

Query: 134 VSSQFVEAVGLFSTLHR-EGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNA 192
              +  EA+  F    R +GH  N   F AFL          L   +   V + G D++ 
Sbjct: 136 TDGRPREAIEAFIEFRRIDGHP-NSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDV 194

Query: 193 FVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRAV 236
            V   LID +  C  +  +  +F  +                 N   E+A   + + R  
Sbjct: 195 SVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKD 254

Query: 237 GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNA 296
             + ++F  + VL AC G+  + + +S H  A+K C E  ++V  AL+D+Y K G I ++
Sbjct: 255 IVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDS 314

Query: 297 RRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM--RQAFVAPNQFTFVSVLQACA 354
            + F+EMP+K+++  + +I  YA       A+ LF  M  R     PN  TFVS+L AC+
Sbjct: 315 EQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACS 374

Query: 355 TMEGLDLGNQI-HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT-W 412
               ++ G +I  S+    G+       + ++D+  + G +E + E   + P +  ++ W
Sbjct: 375 RAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVW 434

Query: 413 NTM-----IVGYVQLG 423
             +     + G  QLG
Sbjct: 435 GALQNACRMHGKPQLG 450



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 116/280 (41%), Gaps = 31/280 (11%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           NS ++   L +C     L   M +H  VL+ G   D+   N L++ Y K  ++  +  +F
Sbjct: 158 NSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIF 217

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
            EM  +N +S+ + +  Y  + +  +A  L+    ++  E + F  ++ L     M   E
Sbjct: 218 TEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLE 277

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------- 218
           L   + A   K   +   FVG+AL+D +  CGC+E + + FD +                
Sbjct: 278 LGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYA 337

Query: 219 FNDCFEEALNFFSQM--RAVGFKPNNFTFAFVLKACL-------GLDTIRVAKSAHGCAL 269
                + AL  F +M  R  G  PN  TF  +L AC        G+      +S +G   
Sbjct: 338 HQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYG--- 394

Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
               E        ++D+  ++G +  A    ++MP +  I
Sbjct: 395 ---IEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTI 431


>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Brachypodium distachyon]
          Length = 814

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 268/798 (33%), Positives = 416/798 (52%), Gaps = 74/798 (9%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT-ISFVTTIQGYTVSS 136
           +  +++K G     +  N+LL+  +   RL  A  LFD+MP RN   S    + GY+ S 
Sbjct: 21  LDARMVKTGFDPATYRLNLLLHSLISSGRLAQARALFDQMPHRNNAFSLNRMLSGYSRSG 80

Query: 137 QFV-----------------------------------EAVGLFSTLHREGHELNPFAFT 161
           Q                                     +AV LF  + REG   +     
Sbjct: 81  QLSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVA 140

Query: 162 AFLKVLVSMGW-------AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKV 214
             L +  + G        A L P  FA    L H SN  V   L+DA+   G +  AR+V
Sbjct: 141 TVLNLPPASGGTAAAIIIASLHP--FALKLGLLH-SNVVVCNTLLDAYCKHGLLAAARRV 197

Query: 215 F-----------DGLFNDCFEE-----ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTI 258
           F           + +   C +E     AL+ F+ MR  G     FTF+ VL    G+  +
Sbjct: 198 FQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDL 257

Query: 259 RVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARY 318
            + +  HG   +     +++V  +LLD Y+K   +   +++F EM ++D + ++ MIA Y
Sbjct: 258 CLGRQVHGLVARATSS-NVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGY 316

Query: 319 AQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDV 378
           A    +   + LF  M+          + S+L    ++  + +G QIH+ +V +GL S+ 
Sbjct: 317 AWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSED 376

Query: 379 FVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE 438
            V NAL+D+Y+KCG ++ +   F     +  V+W  MI G VQ G+  +A+ +F  M   
Sbjct: 377 LVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRA 436

Query: 439 QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDA 498
            +     T+SS ++A ++LA +  G Q+H   +++ +   V   +AL+DMY KCG + +A
Sbjct: 437 GLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEA 496

Query: 499 RLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNG 558
              FD M + N +SWNA+IS Y+ +G +   +K+F+ M   G++P+++TF+ VLSACS+ 
Sbjct: 497 LQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHN 556

Query: 559 GLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRA 618
           GL E+   YF+ M   YGI P  EHY+ ++  LGR G  DK  +++  +PF+   +IW +
Sbjct: 557 GLAEECMKYFELMEYEYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWSS 616

Query: 619 LLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS---------- 668
           +L +C  H N ++ R++A+ +      D   +V+LSNI+A A  WE AA           
Sbjct: 617 ILHSCRTHGNQDLARVAAEKLFSMGSTDATPYVILSNIFAKAGKWEDAAGVKKIMRDRGL 676

Query: 669 -KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVRE 727
            KE G SW+E +  V+ F + D ++  +  I+  LE L  +  K GY PD S  L+ V +
Sbjct: 677 RKETGYSWVEVKHKVYSFSSNDQTNPMITEIKDELERLYKEMDKQGYKPDTSCTLQQVDD 736

Query: 728 DEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRD 787
           D K   L  HSE+LA+AFAL   PP +PIR++KNL  CVDCH+AIK++SKIV R+II+RD
Sbjct: 737 DIKLESLKYHSERLAIAFALINTPPGTPIRVMKNLSACVDCHSAIKMMSKIVNRDIIVRD 796

Query: 788 VHRFHHFQDGCCSCGDFW 805
             RFHHF+DG CSCGD+W
Sbjct: 797 SSRFHHFKDGFCSCGDYW 814


>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
           wallichii]
          Length = 710

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 249/628 (39%), Positives = 366/628 (58%), Gaps = 52/628 (8%)

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           AL  +  M ++G  PN +TF F+LK+C      R  +  HG  LK  Y++DLYV  +L+ 
Sbjct: 87  ALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLIS 146

Query: 286 LYTKSGEISNARRIFE-------------------------------EMPKKDVIPWSFM 314
           +Y ++G + +AR++F+                               E+P KDV+ W+ M
Sbjct: 147 MYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAM 206

Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL 374
           I+ YA+T  + +A+ELF  M +  V P++ T VSV+ ACA    ++LG Q+HS +   G 
Sbjct: 207 ISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGF 266

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
            S++ + NAL+D+Y KCG +E +  LF     ++ ++WNT+I GY  +    +A+++F +
Sbjct: 267 GSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQE 326

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA------LIDM 488
           ML       +VT  S+L ACA L A+E G  +H    K        VANA      LIDM
Sbjct: 327 MLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKG----VANASSHRTSLIDM 382

Query: 489 YAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTF 548
           YAKCG I  A+ VFD + + +  SWNAMI G++MHG +     +F  M++    P+++TF
Sbjct: 383 YAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITF 442

Query: 549 VGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIP 608
           VG+LSACS+ G+L+ G   F+SM  +Y I P +EHY  M+ LLG +G   +A ++I  + 
Sbjct: 443 VGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTME 502

Query: 609 FQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW----- 663
            +P  +IW +LL AC ++ NVE+G   AQ+++  EP++  ++VLLSNIYA A  W     
Sbjct: 503 MEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAK 562

Query: 664 ------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPD 717
                 +K   K PG S IE   +VH F  GD  H     I GMLE + +   +AG++PD
Sbjct: 563 IRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPD 622

Query: 718 LSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISK 777
            S VL+++ E+ KE  L  HSEKLA+AF L    P + + I+KNLR+C +CH A K+ISK
Sbjct: 623 TSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISK 682

Query: 778 IVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           I +REII RD  RFHHF+DG CSC D+W
Sbjct: 683 IYKREIIARDRTRFHHFRDGVCSCNDYW 710



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 147/310 (47%), Gaps = 39/310 (12%)

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN---SVELFAE 403
           +S+L  C T++ L +   IH+ +++ GL +  +  + L++        +    ++ +F  
Sbjct: 6   LSLLHNCKTLQSLRM---IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFET 62

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
             + N + WNTM  G+    +   A+ ++  M+   +     T+  +L++CA   A   G
Sbjct: 63  IQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREG 122

Query: 464 MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND---------------- 507
            Q+H   +K  YD+D+ V  +LI MY + G + DAR VFD  +                 
Sbjct: 123 QQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASK 182

Query: 508 ---------WNE------VSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL 552
                    ++E      VSWNAMISGY+  G + E L++F  M +   RP+  T V V+
Sbjct: 183 GYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVV 242

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
           SAC+    +E G     S + ++G    ++   +++ L  + G ++ A  L EG+ ++  
Sbjct: 243 SACAQSASIELGRQ-VHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYK-D 300

Query: 613 VMIWRALLGA 622
           V+ W  L+G 
Sbjct: 301 VISWNTLIGG 310


>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 258/722 (35%), Positives = 388/722 (53%), Gaps = 51/722 (7%)

Query: 95  NVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHE 154
           N +++ Y+  N+   A K+F++MP+R+ IS+   + GY  +     A  LF+ +     E
Sbjct: 95  NAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMP----E 150

Query: 155 LNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKV 214
            +  ++ A L      G+ E    +F  +       N      L+ A+   G +E AR++
Sbjct: 151 KDVVSWNAMLSGFAQNGFVEEARKIFDQMLV----KNEISWNGLLSAYVQNGRIEDARRL 206

Query: 215 FDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
           FD              S+M       N     +V K    LD  R          K  + 
Sbjct: 207 FD--------------SKMDWEIVSWNCLMGGYVRKK--RLDDARSLFDRMPVRDKISWN 250

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
           +       ++  Y ++G +S ARR+FEE+P +DV  W+ M++ + Q  +  +A  +F  M
Sbjct: 251 I-------MITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEM 303

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
            +             +Q+    +  +L +Q+ S         +    N ++  YA+CG +
Sbjct: 304 PEKNEVSWNAMIAGYVQSQQIEKARELFDQMPS--------RNTSSWNTMVTGYAQCGNI 355

Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
           + +  LF E P+R+ ++W  MI GY Q G+  +A+ +F KM  +         +  L +C
Sbjct: 356 DQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSC 415

Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
           A +AALE G Q+H   VKA +    +  NAL+ MY KCGSI +A  VF+ + + + VSWN
Sbjct: 416 AEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWN 475

Query: 515 AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
            MI+GY+ HG   E L +F+ M+    +P+++T VGVLSACS+ GL+++G  YF SM  N
Sbjct: 476 TMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQN 534

Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL 634
           YGI    +HYT M+ LLGRAG LD+A  L++ +PF P    W ALLGA  IH + E+G  
Sbjct: 535 YGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEK 594

Query: 635 SAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVH 683
           +A+ + + EP++   +VLLSN+YA +  W           +K   K PG SW+E Q   H
Sbjct: 595 AAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTH 654

Query: 684 YFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLAL 743
            F  GD SH +   I   LE L+++ +K G++     VL DV E+EKE  L  HSEKLA+
Sbjct: 655 IFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAV 714

Query: 744 AFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGD 803
           AF +  +PP  PIR+IKNLR+C DCH AIK ISKI QR+II+RD +RFHHF +G CSCGD
Sbjct: 715 AFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGD 774

Query: 804 FW 805
           +W
Sbjct: 775 YW 776



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 131/555 (23%), Positives = 244/555 (43%), Gaps = 74/555 (13%)

Query: 19  SKINAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTI 78
           S I  W R +SA   +   QC ++ +  +   +   ++ +Y   +   + N+    A   
Sbjct: 58  SDIVKWNRKISAY--MRKGQCESALS--VFNGMRRRSTVTYNAMISGYLSNNKFDCAR-- 111

Query: 79  HCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQF 138
             +V +K    DL + NV+L+ YVK   L  A  LF++MPE++ +S+   + G+  +   
Sbjct: 112 --KVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFV 169

Query: 139 VEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVF----------------AC 182
            EA  +F  +  +    N  ++   L   V  G  E    +F                  
Sbjct: 170 EEARKIFDQMLVK----NEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGY 225

Query: 183 VYKLGHDS-----------NAFVGTALIDAFSVCGCVEFARKVFDGL------------- 218
           V K   D            +      +I  ++  G +  AR++F+ L             
Sbjct: 226 VRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVS 285

Query: 219 ---FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
               N   +EA   F +M     + N  ++  ++   +    I  A+             
Sbjct: 286 GFVQNGMLDEATRIFEEMP----EKNEVSWNAMIAGYVQSQQIEKARE----LFDQMPSR 337

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
           +      ++  Y + G I  A+ +F+EMP++D I W+ MI+ YAQ+  S +A+ LF +M+
Sbjct: 338 NTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMK 397

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
           +     N+      L +CA +  L+LG Q+H  +V+ G  +     NAL+ +Y KCG +E
Sbjct: 398 RDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIE 457

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
            + ++F +  +++ V+WNTMI GY + G   +A+ +F  M +  +   +VT   VL AC+
Sbjct: 458 EAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACS 516

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANA-----LIDMYAKCGSITDARLVFDMMNDW-N 509
               ++ GM+ +  ++  NY    + ANA     +ID+  + G + +A  +   M  + +
Sbjct: 517 HTGLVDKGME-YFNSMYQNYG---ITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPD 572

Query: 510 EVSWNAMISGYSMHG 524
             +W A++    +HG
Sbjct: 573 AATWGALLGASRIHG 587



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 107/449 (23%), Positives = 204/449 (45%), Gaps = 55/449 (12%)

Query: 208 VEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGC 267
           V++ RK+   +     E AL+ F+ MR    + +  T+  ++   L       + +   C
Sbjct: 61  VKWNRKISAYMRKGQCESALSVFNGMR----RRSTVTYNAMISGYL-------SNNKFDC 109

Query: 268 ALKTCYEM---DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLS 324
           A K   +M   DL     +L  Y K+G +S AR +F +MP+KDV+ W+ M++ +AQ    
Sbjct: 110 ARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFV 169

Query: 325 IDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNAL 384
            +A ++F +M    +  N+ ++  +L A      ++   ++    +   ++S     N L
Sbjct: 170 EEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVS----WNCL 221

Query: 385 MDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMF------------ 432
           M  Y +  R++++  LF   P R+ ++WN MI GY Q G + +A  +F            
Sbjct: 222 MGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWT 281

Query: 433 ---------------SKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM 477
                          +++ EE     EV++++++        +E   ++       N   
Sbjct: 282 AMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRN--- 338

Query: 478 DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQ 537
                N ++  YA+CG+I  A+++FD M   + +SW AMISGY+  G S E L +F  M+
Sbjct: 339 -TSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMK 397

Query: 538 QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHL 597
           + G   N       LS+C+    LE G+     +V   G +       +++++ G+ G +
Sbjct: 398 RDGGILNRSALACALSSCAEIAALELGKQLHGRLV-KAGFQTGYIAGNALLAMYGKCGSI 456

Query: 598 DKAAKLIEGIPFQPSVMIWRALLGACIIH 626
           ++A  + E I  +  ++ W  ++     H
Sbjct: 457 EEAFDVFEDIT-EKDIVSWNTMIAGYARH 484



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 107/420 (25%), Positives = 182/420 (43%), Gaps = 59/420 (14%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  S+   L + +QN  ++ A  +    +      ++ + N L+  YV+  RL DA  LF
Sbjct: 183 NEISWNGLLSAYVQNGRIEDARRLFDSKMD----WEIVSWNCLMGGYVRKKRLDDARSLF 238

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D MP R+ IS+   I GY  +    EA  LF  L       + FA+TA +   V  G  +
Sbjct: 239 DRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIR----DVFAWTAMVSGFVQNGMLD 294

Query: 175 LCPCVFACVYKLGHDS-NAFVG--------------------------TALIDAFSVCGC 207
               +F  + +    S NA +                             ++  ++ CG 
Sbjct: 295 EATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGN 354

Query: 208 VEFARKVFDGL-FNDCF---------------EEALNFFSQMRAVGFKPNNFTFAFVLKA 251
           ++ A+ +FD +   DC                EEAL+ F +M+  G   N    A  L +
Sbjct: 355 IDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSS 414

Query: 252 CLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPW 311
           C  +  + + K  HG  +K  ++       ALL +Y K G I  A  +FE++ +KD++ W
Sbjct: 415 CAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSW 474

Query: 312 SFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ-IHSLVV 370
           + MIA YA+     +A+ LF  M+   + P+  T V VL AC+    +D G +  +S+  
Sbjct: 475 NTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQ 533

Query: 371 RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTM-----IVGYVQLGE 424
             G+ ++      ++D+  + GR++ ++ L    P   +  TW  +     I G  +LGE
Sbjct: 534 NYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGE 593



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/342 (22%), Positives = 158/342 (46%), Gaps = 47/342 (13%)

Query: 307 DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIH 366
           D++ W+  I+ Y +      A+ +F  MR+     +  T+ +++    +    D   ++ 
Sbjct: 59  DIVKWNRKISAYMRKGQCESALSVFNGMRRR----STVTYNAMISGYLSNNKFDCARKVF 114

Query: 367 SLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVG 426
             +    L+S     N ++  Y K G +  +  LF + P+++ V+WN M+ G+ Q G V 
Sbjct: 115 EKMPDRDLIS----WNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVE 170

Query: 427 KAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALI 486
           +A  +F +ML +     E++++ +L A      +E   ++      +  D ++V  N L+
Sbjct: 171 EARKIFDQMLVK----NEISWNGLLSAYVQNGRIEDARRL----FDSKMDWEIVSWNCLM 222

Query: 487 DMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNL 546
             Y +   + DAR +FD M   +++SWN MI+GY+ +GL +E  ++F+ +  R    +  
Sbjct: 223 GGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIR----DVF 278

Query: 547 TFVGVLSACSNGGLL-----------EQGEAYFKSMVANYGIEPCIEH------------ 583
            +  ++S     G+L           E+ E  + +M+A Y     IE             
Sbjct: 279 AWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRN 338

Query: 584 ---YTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
              + +MV+   + G++D+A  L + +P Q   + W A++  
Sbjct: 339 TSSWNTMVTGYAQCGNIDQAKILFDEMP-QRDCISWAAMISG 379



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 124/283 (43%), Gaps = 37/283 (13%)

Query: 376 SDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKM 435
           SD+   N  +  Y + G+ E+++ +F    +R+ VT+N MI GY+   +   A  +F KM
Sbjct: 58  SDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKM 117

Query: 436 LEEQVPATEVTYS--------SVLRA---------CASLAALEPGMQVHCLTVKANYDMD 478
            +  + +  V  S        S  RA           S  A+  G   +    +A    D
Sbjct: 118 PDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFD 177

Query: 479 VVVA------NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
            ++       N L+  Y + G I DAR +FD   DW  VSWN ++ GY       +   +
Sbjct: 178 QMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSL 237

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE--HYTSMVSL 590
           FD M  R    + +++  +++  +  GLL +    F+ +       P  +   +T+MVS 
Sbjct: 238 FDRMPVR----DKISWNIMITGYAQNGLLSEARRLFEEL-------PIRDVFAWTAMVSG 286

Query: 591 LGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGR 633
             + G LD+A ++ E +P +  V  W A++   +    +E  R
Sbjct: 287 FVQNGMLDEATRIFEEMPEKNEVS-WNAMIAGYVQSQQIEKAR 328



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 76/168 (45%), Gaps = 10/168 (5%)

Query: 476 DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDL 535
           D D+V  N  I  Y + G    A  VF+ M   + V++NAMISGY  +       KVF+ 
Sbjct: 57  DSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEK 116

Query: 536 MQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAG 595
           M  R    + +++  +LS     G L    A F  M      E  +  + +M+S   + G
Sbjct: 117 MPDR----DLISWNVMLSGYVKNGNLSAARALFNQMP-----EKDVVSWNAMLSGFAQNG 167

Query: 596 HLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFE 643
            +++A K+ + +  +  +  W  LL A + +  +E  R      +D+E
Sbjct: 168 FVEEARKIFDQMLVKNEIS-WNGLLSAYVQNGRIEDARRLFDSKMDWE 214


>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 266/768 (34%), Positives = 399/768 (51%), Gaps = 71/768 (9%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           SE  + +Y++ LQ C           +H  +      +D      L++ Y     L +  
Sbjct: 95  SELETKTYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGR 154

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELN--PFAFTAFLKVLVS 169
           ++FD M ++N   +   +  Y     F E++ LF  +  +G E      AF  F K    
Sbjct: 155 RVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDK---- 210

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNF 229
                LC            D +     ++I  +           V +GL     E  L  
Sbjct: 211 -----LC------------DRDVISWNSMISGY-----------VSNGLT----ERGLGI 238

Query: 230 FSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK 289
           + QM  +G   +  T   VL  C    T+ + K+ H  A+K+ +E  +  +  LLD+Y+K
Sbjct: 239 YKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSK 298

Query: 290 SGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSV 349
            G++  A R+FE+M +++V+ W+ MIA Y +   S  A++L  +M +  V  +     S+
Sbjct: 299 CGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSI 358

Query: 350 LQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNH 409
           L ACA    LD G  +H  +    + S++FV NALMD+YAKCG ME +  +F+    ++ 
Sbjct: 359 LHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDI 418

Query: 410 VTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCL 469
           ++WNTMI      GE+               P +  T + VL ACASL+ALE G ++H  
Sbjct: 419 ISWNTMI------GELK--------------PDSR-TMACVLPACASLSALERGKEIHGY 457

Query: 470 TVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEV 529
            ++  Y  D  VANAL+D+Y KCG +  ARL+FDM+   + VSW  MI+GY MHG   E 
Sbjct: 458 ILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEA 517

Query: 530 LKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVS 589
           +  F+ M+  G  P+ ++F+ +L ACS+ GLLEQG  +F  M  ++ IEP +EHY  MV 
Sbjct: 518 IATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVD 577

Query: 590 LLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEAT 649
           LL R G+L KA + IE +P  P   IW ALL  C  ++++E+    A+ + + EPE+   
Sbjct: 578 LLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENSGY 637

Query: 650 HVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAG-DTSHADMNI 697
           +VLL+NIYA A  WE           +   K PG SWIE +G V+ F +G ++SH     
Sbjct: 638 YVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKN 697

Query: 698 IRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIR 757
           I  +L+ +  K ++ G+ P     L +  E +KE  L  HSEKLA+AF L  +PP   IR
Sbjct: 698 IESLLKKMRRKMKEEGHFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIR 757

Query: 758 IIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           + KNLR+C DCH   K +SK  +REI++RD +RFHHF+DG CSC  FW
Sbjct: 758 VTKNLRVCGDCHEMAKFMSKETRREIVLRDPNRFHHFKDGYCSCRGFW 805


>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Brachypodium distachyon]
          Length = 921

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 267/814 (32%), Positives = 420/814 (51%), Gaps = 70/814 (8%)

Query: 50  SVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD 109
            + E N+ ++   +   +QN D+  A  +   +  +    D+ + N ++  Y    ++ D
Sbjct: 120 GMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSR----DVTSWNSMVTGYCHSRQMVD 175

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A  LF +MP+RN +++   I GY    Q  +   +F  +H EG   +   F + L  +  
Sbjct: 176 AWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTG 235

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSV-CGCVEFARKVFDGLFNDCFEEALN 228
           +    +   +   V K G +S+  +GT++++ ++     ++ A K FDG+     E    
Sbjct: 236 LQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMV----ERNEY 291

Query: 229 FFSQMRAVGFKPNNFTFAFVLKACLGLDTIRV--AKSAHGCALKTCYEMD----LYVAV- 281
            +S M A          A    A  G D ++   +++A    L  C  +     L+  + 
Sbjct: 292 TWSTMIAALSHGGRIDAAI---AVYGRDPVKSIPSQTALLTGLARCGRITEARILFEQIP 348

Query: 282 --------ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
                   A++  Y ++G +  A+ +F+ MP ++ I W+ MIA YAQ   S +A++L   
Sbjct: 349 DPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQA 408

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           + +  + P+  +  S   AC+ +  L+ G Q+HSL V+ G   + +V NAL+ +Y KC  
Sbjct: 409 LHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRN 468

Query: 394 ME-------------------------------NSVELFAESPKRNHVTWNTMIVGYVQL 422
           ME                               ++  +F     R+ V+W T+I  Y Q 
Sbjct: 469 MEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQA 528

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
               +A+  F  ML E         + +L  C  L + + G Q+H + +K   D +++VA
Sbjct: 529 ERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVA 588

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
           NAL+ MY KCG   D+  VFD M + +  +WN  I+G + HGL  E +K+++ M+  G  
Sbjct: 589 NALMSMYFKCGC-ADSHKVFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVL 647

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           PN +TFVG+L+ACS+ GL+++G  +FKSM  +YG+ P +EHY  MV LLGR G +  A K
Sbjct: 648 PNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEK 707

Query: 603 LIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARS 662
            I  +P +P  +IW ALLGAC IH N EIGR +A+ +   EP +   +V+LSNIY+    
Sbjct: 708 FIYDMPIEPDTVIWSALLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGM 767

Query: 663 W-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRK 711
           W           ++  SKEPG SW++ +  VH F  GD  H  +  I   L+ L    R 
Sbjct: 768 WVEVAELRKIMKQRGVSKEPGCSWMQIRNKVHSFVTGDKQHEKIEEIDYTLQDLYTLLRG 827

Query: 712 AGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTA 771
            GY+PD   VL D+ E++KE  L  HSEKLA+A+ L   P   PI+I+KNLRIC DCHT 
Sbjct: 828 TGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTF 887

Query: 772 IKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           IK +S + +R+I IRD +RFHHF++G CSCGDFW
Sbjct: 888 IKFVSHVTKRDIDIRDGNRFHHFRNGSCSCGDFW 921



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 127/580 (21%), Positives = 246/580 (42%), Gaps = 78/580 (13%)

Query: 89  LDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTL 148
           LD  A +  +    +L RL +A ++FD MP R+ I++ + I  Y  S    +A  LF  +
Sbjct: 31  LDKSAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAI 90

Query: 149 HREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCV 208
                                                     N    T L+  ++  G V
Sbjct: 91  S---------------------------------------GGNVRTATILLSGYARLGRV 111

Query: 209 EFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCA 268
             AR+VFDG+     E     ++ M +   +  + T A  L                   
Sbjct: 112 LDARRVFDGMP----ERNTVAWNAMVSCYVQNGDITMARRL------------------- 148

Query: 269 LKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAV 328
                  D+    +++  Y  S ++ +A  +F++MP+++++ W+ MI+ Y + +      
Sbjct: 149 FDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGW 208

Query: 329 ELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVY 388
           ++F  M     +P+Q  F SVL A   ++ L +   +  LV++ G  SDV +  ++++VY
Sbjct: 209 DIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVY 268

Query: 389 AK-CGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTY 447
            +    ++ +++ F    +RN  TW+TMI      G +  A+ ++ +   + +P+     
Sbjct: 269 TRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSIPSQTALL 328

Query: 448 SSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND 507
           + + R C  +           +  +   D  VV  NA+I  Y + G + +A+ +FD M  
Sbjct: 329 TGLAR-CGRITEAR-------ILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPF 380

Query: 508 WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAY 567
            N +SW  MI+GY+ +G S E L +   + + G  P+  +      ACS+ G LE G   
Sbjct: 381 RNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQ- 439

Query: 568 FKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
             S+    G +       +++S+ G+  +++   ++   +  + +V  W + + A + +N
Sbjct: 440 VHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVS-WNSFIAALVQNN 498

Query: 628 NVEIGRLSAQHILD-FEPEDEATHVLLSNIYAMARSWEKA 666
            +E     A+HI D     D  +   + + YA A   ++A
Sbjct: 499 MLE----DARHIFDNMLSRDVVSWTTIISAYAQAERGDEA 534


>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 659

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 240/601 (39%), Positives = 351/601 (58%), Gaps = 20/601 (3%)

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           EAL  FS MR +   P   +F   +KAC  L  I   K  H  A    Y+ D++V+ AL+
Sbjct: 59  EALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSGKQTHQQAFVFGYQSDIFVSSALI 118

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM------RQAF 338
            +Y+  G++ +AR++F+E+PK++++ W+ MI  Y     ++DAV LF  +        A 
Sbjct: 119 VMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLIEENDDDAT 178

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           +  +    VSV+ AC+ +    L   IHS V++ G    V V N L+D YAK G    +V
Sbjct: 179 MFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAV 238

Query: 399 --ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATE-VTYSSVLRACA 455
             ++F +   ++ V++N+++  Y Q G   +A  +F ++++E+V     +T S+VL A +
Sbjct: 239 ARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVS 298

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
              AL  G  +H   ++   + DV+V  ++IDMY KCG +  ARL FD M + N  SW A
Sbjct: 299 HSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTA 358

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           MI+GY MHG +A+ L++F  M   G RPN +TFV VL+ACS+ GL + G  +F +M   +
Sbjct: 359 MIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRF 418

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS 635
           G+EP +EHY  MV LLGRAG L KA  LI+ +  +P  +IW +LL AC IH NVE+  +S
Sbjct: 419 GVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAACRIHKNVELAEIS 478

Query: 636 AQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHY 684
              + + +P +   ++LLS+IYA +  W+           +   K PG S +E  G VH 
Sbjct: 479 VARLFELDPSNCGYYMLLSHIYADSGRWKDVERVRMTMKNRGLVKPPGFSLLELNGEVHV 538

Query: 685 FRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALA 744
           F  GD  H     I   L  LN K  +AGY+ + S+V  DV E+EKE  L VHSEKLA+A
Sbjct: 539 FLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIA 598

Query: 745 FALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
           F +    P S + ++KNLR+C DCH  IK+ISKIV RE ++RD  RFHHF+DG CSCGD+
Sbjct: 599 FGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGFCSCGDY 658

Query: 805 W 805
           W
Sbjct: 659 W 659



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 187/362 (51%), Gaps = 12/362 (3%)

Query: 277 LYVAVALLDLYTKSGEISNARRIFEE-MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
           L+ +V+ L    +  E  N   +F   + K DV  W+ +IA  A++  S +A+  F  MR
Sbjct: 9   LFCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMR 68

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
           +  + P + +F   ++AC+++  +  G Q H      G  SD+FVS+AL+ +Y+ CG++E
Sbjct: 69  KLSLYPTRSSFPCAIKACSSLLDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLE 128

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTY------SS 449
           ++ ++F E PKRN V+W +MI GY   G    A+ +F  +L E+       +       S
Sbjct: 129 DARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVS 188

Query: 450 VLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKC--GSITDARLVFDMMND 507
           V+ AC+ +AA      +H   +K  +D  V V N L+D YAK   G +  AR +FD + D
Sbjct: 189 VISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVD 248

Query: 508 WNEVSWNAMISGYSMHGLSAEVLKVF-DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEA 566
            + VS+N+++S Y+  G+S E   VF  L++++    N +T   VL A S+ G L  G+ 
Sbjct: 249 KDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKC 308

Query: 567 YFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH 626
                V   G+E  +   TS++ +  + G ++ A    + +    +V  W A++    +H
Sbjct: 309 -IHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMK-NKNVRSWTAMIAGYGMH 366

Query: 627 NN 628
            +
Sbjct: 367 GH 368



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 194/407 (47%), Gaps = 36/407 (8%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           S+  ++++C    D+ +    H Q    G   D+F ++ L+ +Y    +L DA K+FDE+
Sbjct: 78  SFPCAIKACSSLLDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEI 137

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHE------LNPFAFTAFLKVLVSMG 171
           P+RN +S+ + I+GY ++   ++AV LF  L  E ++      L+     + +     + 
Sbjct: 138 PKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVA 197

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVC--GCVEFARKVFDGL-------FNDC 222
              L   + + V K G D    VG  L+DA++    G V  ARK+FD +       +N  
Sbjct: 198 AKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSI 257

Query: 223 FE---------EALNFFSQM---RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALK 270
                      EA + F ++   + V F  N  T + VL A      +R+ K  H   ++
Sbjct: 258 MSVYAQSGMSNEAFDVFRRLIKEKVVTF--NCITLSTVLLAVSHSGALRIGKCIHDQVIR 315

Query: 271 TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVEL 330
              E D+ V  +++D+Y K G +  AR  F+ M  K+V  W+ MIA Y     +  A+EL
Sbjct: 316 MGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALEL 375

Query: 331 FCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVYA 389
           F  M  + V PN  TFVSVL AC+     D+G +  +++  R G+   +     ++D+  
Sbjct: 376 FPAMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLG 435

Query: 390 KCGRMENSVELFAESP-KRNHVTWNTMIVG-----YVQLGEVGKAMI 430
           + G ++ + +L  +   + + + W++++        V+L E+  A +
Sbjct: 436 RAGFLQKAYDLIQKMKMEPDSIIWSSLLAACRIHKNVELAEISVARL 482



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/268 (22%), Positives = 110/268 (41%), Gaps = 28/268 (10%)

Query: 47  ITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNR 106
           I   V  FN  + +T L +   +  L+    IH QV++ G   D+     ++++Y K  R
Sbjct: 278 IKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGR 337

Query: 107 LPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV 166
           +  A   FD M  +N  S+   I GY +     +A+ LF  +   G   N   F +    
Sbjct: 338 VETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSV--- 394

Query: 167 LVSMGWAELCPCVFACVYKLG-HDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF-E 224
                   L  C  A ++ +G H  NA  G      F V   +E    + D L    F +
Sbjct: 395 --------LAACSHAGLHDVGWHWFNAMKGR-----FGVEPGLEHYGCMVDLLGRAGFLQ 441

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY---VAV 281
           +A +   +M+    +P++  ++ +L AC     + +A+     ++   +E+D       +
Sbjct: 442 KAYDLIQKMK---MEPDSIIWSSLLAACRIHKNVELAE----ISVARLFELDPSNCGYYM 494

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVI 309
            L  +Y  SG   +  R+   M  + ++
Sbjct: 495 LLSHIYADSGRWKDVERVRMTMKNRGLV 522


>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At3g23330 [Vitis vinifera]
          Length = 1008

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 241/639 (37%), Positives = 358/639 (56%), Gaps = 58/639 (9%)

Query: 225  EALNFFSQMRAVGFKPNNFTFAFVLKACLG-LDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
            + L  F++M+  G  PN FT + VLK+C   ++  R+ K  HG  L+   ++D  +  ++
Sbjct: 370  DVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSI 429

Query: 284  LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQT---DLSID-------------- 326
            LD Y K      A ++F  M +KD + W+ M++ Y Q      S+D              
Sbjct: 430  LDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWN 489

Query: 327  --------------AVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV 372
                          A+EL  +M  A  A N+ TF   L   +++  L LG QIH+ V++V
Sbjct: 490  TMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKV 549

Query: 373  GLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNH---------------VTWNTMIV 417
            G+L D FV N+L+D+Y KCG ME +  +F   P+ +                V+W++M+ 
Sbjct: 550  GVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVS 609

Query: 418  GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM 477
            GYVQ G    A+  FS M+  QV   + T +SV+ ACAS   LE G QVH    K  + +
Sbjct: 610  GYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGL 669

Query: 478  DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQ 537
            DV + +++IDMY KCGS+ DA L+F+   D N V W +MISG ++HG   E +++F+LM 
Sbjct: 670  DVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMI 729

Query: 538  QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHL 597
              G  PN ++FVGVL+ACS+ GLLE+G  YF+ M   YGI P  EH+T MV L GRAG L
Sbjct: 730  NEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRL 789

Query: 598  DKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIY 657
            ++  + I          +WR+ L +C +H N+E+G    + +L+ EP D   ++L S+I 
Sbjct: 790  NEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDAGPYILFSSIC 849

Query: 658  AMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLN 706
            A    WE+AA            K P  SWI+ +  VH F  GD SH     I   L+ L 
Sbjct: 850  ATEHRWEEAAKIRSLMQQRGVKKNPSQSWIQLKNQVHSFVMGDRSHPQDTKIYSYLDELI 909

Query: 707  MKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICV 766
             + ++ GY  D++ V++DV +++++  L  HSEKLA+A+ +    P +PIR++KNLR+C+
Sbjct: 910  GRLKEIGYSTDVTPVMQDVEQEQRQVLLGYHSEKLAIAYGIISTAPGTPIRVMKNLRVCI 969

Query: 767  DCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            DCH  IK  S+++ REIIIRD+HRFHHF+ G CSC D+W
Sbjct: 970  DCHNFIKYASELLGREIIIRDIHRFHHFKHGHCSCADYW 1008



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 197/396 (49%), Gaps = 55/396 (13%)

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           LL+LY KS  +  A ++FEE+P+ DV  W+ +I+ +A+  LS D + LF +M+   V PN
Sbjct: 327 LLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPN 386

Query: 343 QFTFVSVLQACAT-MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC---------- 391
           QFT   VL++C++ +    +G  IH  ++R GL  D  ++N+++D Y KC          
Sbjct: 387 QFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLF 446

Query: 392 ---------------------GRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMI 430
                                G M+ SV+LF + P ++  +WNTMI G ++ G    A+ 
Sbjct: 447 GLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALE 506

Query: 431 MFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYA 490
           +  KM+       ++T+S  L   +SL+ L  G Q+H   +K     D  V N+LIDMY 
Sbjct: 507 LLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYC 566

Query: 491 KCGSITDARLVF-------DMMND--------WNEVSWNAMISGYSMHGLSAEVLKVFDL 535
           KCG +  A ++F        MMN            VSW++M+SGY  +G   + LK F  
Sbjct: 567 KCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSF 626

Query: 536 MQQRGWRPNNLTFVGVLSACSNGGLLEQGE---AYFKSMVANYGIEPCIEHYTSMVSLLG 592
           M       +  T   V+SAC++ G+LE G     Y + +   +G++  +   +S++ +  
Sbjct: 627 MICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKI--GHGLDVFLG--SSIIDMYV 682

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
           + G L+ A  LI       +V++W +++  C +H  
Sbjct: 683 KCGSLNDAW-LIFNQAKDRNVVLWTSMISGCALHGQ 717



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 132/513 (25%), Positives = 235/513 (45%), Gaps = 71/513 (13%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           +H +++K G C+ +   N LLN+Y K   L  A K+F+E+P+ +  S+   I G+     
Sbjct: 310 LHAKLIKNG-CVGIRG-NHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGL 367

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVS-MGWAELCPCVFACVYKLGHDSNAFVGT 196
             + +GLF+ +  +G   N F  +  LK   S +  + +   +   + + G D +A +  
Sbjct: 368 SADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNN 427

Query: 197 ALIDAFSVCGCVEFARKVF----------------------------------------- 215
           +++D +  C C  +A K+F                                         
Sbjct: 428 SILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAAS 487

Query: 216 -----DGLF-NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCAL 269
                DGL  N C   AL    +M A G   N  TF+  L     L  + + K  H   L
Sbjct: 488 WNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVL 547

Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK---------------DVIPWSFM 314
           K     D +V  +L+D+Y K GE+  A  IF+ +P++               + + WS M
Sbjct: 548 KVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSM 607

Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL 374
           ++ Y Q     DA++ F  M  + V  ++FT  SV+ ACA+   L+LG Q+H  + ++G 
Sbjct: 608 VSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGH 667

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
             DVF+ ++++D+Y KCG + ++  +F ++  RN V W +MI G    G+  +A+ +F  
Sbjct: 668 GLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFEL 727

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKC 492
           M+ E +   EV++  VL AC+    LE G +   L ++  Y +     +   ++D+Y + 
Sbjct: 728 MINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRL-MREVYGIRPGAEHFTCMVDLYGRA 786

Query: 493 GSITDARLVFDMMNDWNEVS--WNAMISGYSMH 523
           G + + +  F   N  +++S  W + +S   +H
Sbjct: 787 GRLNEIK-EFIHNNAISKLSSVWRSFLSSCRVH 818



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 105/411 (25%), Positives = 172/411 (41%), Gaps = 65/411 (15%)

Query: 55  NSHSYATSLQSCIQN-DDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
           N  + +  L+SC  N +D +    IH  +L+ G  LD    N +L+ YVK      A KL
Sbjct: 386 NQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKL 445

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLF---------------STLHREGHE---- 154
           F  M E++T+S+   +  Y       ++V LF                 L R G E    
Sbjct: 446 FGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVAL 505

Query: 155 ------------LNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAF 202
                        N   F+  L +  S+    L   +   V K+G   + FV  +LID +
Sbjct: 506 ELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMY 565

Query: 203 SVCGCVEFARKVFDGL-------------------------------FNDCFEEALNFFS 231
             CG +E A  +F  L                                N  FE+AL  FS
Sbjct: 566 CKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFS 625

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
            M     + + FT   V+ AC     + + +  HG   K  + +D+++  +++D+Y K G
Sbjct: 626 FMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCG 685

Query: 292 EISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQ 351
            +++A  IF +   ++V+ W+ MI+  A      +AV LF  M    + PN+ +FV VL 
Sbjct: 686 SLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLT 745

Query: 352 ACATMEGLDLGNQIHSLVVRV-GLLSDVFVSNALMDVYAKCGRMENSVELF 401
           AC+    L+ G +   L+  V G+         ++D+Y + GR+ N ++ F
Sbjct: 746 ACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRL-NEIKEF 795



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 88/158 (55%), Gaps = 4/158 (2%)

Query: 382 NALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVP 441
           N L+++YAK   +E + ++F E P+ +  +W  +I G+ ++G     + +F+KM ++ V 
Sbjct: 325 NHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVC 384

Query: 442 ATEVTYSSVLRACAS-LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARL 500
             + T S VL++C+S +     G  +H   ++   D+D V+ N+++D Y KC     A  
Sbjct: 385 PNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEK 444

Query: 501 VFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
           +F +M + + VSWN M+S Y   G   ++ K  DL +Q
Sbjct: 445 LFGLMAEKDTVSWNIMMSSYLQIG---DMQKSVDLFRQ 479



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 101/230 (43%), Gaps = 31/230 (13%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
           FN  +++ +L        L     IH QVLK G   D F  N L+++Y K   +  A+ +
Sbjct: 518 FNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVI 577

Query: 114 FDEMPERNT---------------ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPF 158
           F  +P+ ++               +S+ + + GY  + +F +A+  FS +     E++ F
Sbjct: 578 FKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKF 637

Query: 159 AFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-- 216
             T+ +    S G  EL   V   + K+GH  + F+G+++ID +  CG +  A  +F+  
Sbjct: 638 TLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQA 697

Query: 217 ---------GLFNDCF-----EEALNFFSQMRAVGFKPNNFTFAFVLKAC 252
                     + + C       EA+  F  M   G  PN  +F  VL AC
Sbjct: 698 KDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTAC 747



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 47/78 (60%)

Query: 480 VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
           +  N L+++YAK  ++  A  +F+ +   +  SW  +ISG++  GLSA+VL +F  MQ +
Sbjct: 322 IRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQ 381

Query: 540 GWRPNNLTFVGVLSACSN 557
           G  PN  T   VL +CS+
Sbjct: 382 GVCPNQFTLSIVLKSCSS 399



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 58/122 (47%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E +  +  + + +C     L+    +H  + K G+ LD+F  + ++++YVK   L DA  
Sbjct: 633 EVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWL 692

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +F++  +RN + + + I G  +  Q  EAV LF  +  EG   N  +F   L      G 
Sbjct: 693 IFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGL 752

Query: 173 AE 174
            E
Sbjct: 753 LE 754


>gi|224140235|ref|XP_002323489.1| predicted protein [Populus trichocarpa]
 gi|222868119|gb|EEF05250.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 264/807 (32%), Positives = 420/807 (52%), Gaps = 66/807 (8%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L+  ++  D+  A  +H  +LK G   D    N ++  Y+KL  + DA ++F  M   + 
Sbjct: 111 LRLSVKYTDIDLARALHASILKLGE--DTHLGNAVIAAYIKLGLVVDAYEVFMGMSTPDV 168

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +S+   I  ++  ++  EA+ LF  +   G E N ++F A L   +     E+   V A 
Sbjct: 169 VSYSALISSFSKLNRETEAIQLFFRMRISGIEPNEYSFVAILTACIRSLELEMGLQVHAL 228

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND----------------CFEEA 226
             KLG+    FV  ALI  +  CGC++ A  +FD +                    +E+A
Sbjct: 229 AIKLGYSQLVFVANALIGLYGKCGCLDHAIHLFDEMPQRDIASWNTMISSLVKGLSYEKA 288

Query: 227 LNFFSQM-RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           L  F  + +  GFK + FT + +L AC         +  H  A++   E +L V+ A++ 
Sbjct: 289 LELFRVLNQNKGFKADQFTLSTLLTACARCHARIQGREIHAYAIRIGLENNLSVSNAIIG 348

Query: 286 LYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQ---TDLSID---------------- 326
            YT+ G +++   +FE MP +D+I W+ MI  Y +    DL++D                
Sbjct: 349 FYTRCGSLNHVAALFERMPVRDIITWTEMITAYMEFGLVDLAVDMFNKMPEKNSVSYNAL 408

Query: 327 ------------AVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL 374
                       A+ LF RM Q       FT   V+ AC  +  L++  QIH  +++ G 
Sbjct: 409 LTGFCKNNEGLKALNLFVRMVQEGAELTDFTLTGVINACGLLLKLEISRQIHGFIIKFGF 468

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFA--ESPKRNHVTWNTMIVGYVQLGEVGKAMIMF 432
            S+  +  AL+D+ +KCGRM+++  +F    +   N +   +MI GY + G   +A+ +F
Sbjct: 469 RSNACIEAALIDMCSKCGRMDDADRMFQSLSTDGGNSIIQTSMICGYARNGLPEEAICLF 528

Query: 433 SKMLEE-QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAK 491
            +   E  +   EV ++S+L  C +L   E G Q+HC  +K  +  ++ V N++I MY+K
Sbjct: 529 YRCQSEGTMVLDEVAFTSILGVCGTLGFHEVGKQIHCQALKTGFHAELGVGNSIISMYSK 588

Query: 492 CGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGV 551
           C +I DA   F+ M   + VSWN +I+G  +H    E L ++  M++ G +P+ +TFV +
Sbjct: 589 CYNIDDAIKAFNTMPGHDVVSWNGLIAGQLLHRQGDEALAIWSSMEKAGIKPDAITFVLI 648

Query: 552 LSAC--SNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF 609
           +SA   ++  LL++  + F SM   + +EP  EHY S+V +LG  G L++A +LI  +PF
Sbjct: 649 VSAYKFTSSNLLDECRSLFLSMKMIHDLEPTSEHYASLVGVLGYWGLLEEAEELINKMPF 708

Query: 610 QPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW------ 663
            P V +WRALL  C +H N  IG+  A+HI+  EP D +T+VL+SN+YA +  W      
Sbjct: 709 DPEVSVWRALLDGCRLHANTSIGKRVAKHIIGMEPRDPSTYVLVSNLYAASGRWHCSEMV 768

Query: 664 -----EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDL 718
                ++   K P  SW+  +  +H F A D SH   N I   L+ L +K  KAGY PD+
Sbjct: 769 RENMRDRGLRKHPCRSWVIIKKQLHTFYARDKSHPQSNDIYSGLDILILKCLKAGYEPDM 828

Query: 719 SAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKI 778
           S VL++V E +K+ +L+ HS KLA  + L K  P  PIR++KN+ +C DCHT +K  + +
Sbjct: 829 SFVLQEVEEQQKKDFLFYHSAKLAATYGLLKTRPGEPIRVVKNILLCRDCHTFLKYATVV 888

Query: 779 VQREIIIRDVHRFHHFQDGCCSCGDFW 805
            QREII RD   FH F +G CSC  +W
Sbjct: 889 TQREIIFRDASGFHCFSNGQCSCKGYW 915



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 205/396 (51%), Gaps = 43/396 (10%)

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
           +L+  +    I +A++ H   LK     D ++  A++  Y K G + +A  +F  M   D
Sbjct: 110 LLRLSVKYTDIDLARALHASILK--LGEDTHLGNAVIAAYIKLGLVVDAYEVFMGMSTPD 167

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
           V+ +S +I+ +++ +   +A++LF RMR + + PN+++FV++L AC     L++G Q+H+
Sbjct: 168 VVSYSALISSFSKLNRETEAIQLFFRMRISGIEPNEYSFVAILTACIRSLELEMGLQVHA 227

Query: 368 LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK 427
           L +++G    VFV+NAL+ +Y KCG +++++ LF E P+R+  +WNTMI   V+     K
Sbjct: 228 LAIKLGYSQLVFVANALIGLYGKCGCLDHAIHLFDEMPQRDIASWNTMISSLVKGLSYEK 287

Query: 428 AMIMFSKMLEEQ-VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALI 486
           A+ +F  + + +   A + T S++L ACA   A   G ++H   ++   + ++ V+NA+I
Sbjct: 288 ALELFRVLNQNKGFKADQFTLSTLLTACARCHARIQGREIHAYAIRIGLENNLSVSNAII 347

Query: 487 DMYAKCGSITDARLVF----------------------------DMMN---DWNEVSWNA 515
             Y +CGS+     +F                            DM N   + N VS+NA
Sbjct: 348 GFYTRCGSLNHVAALFERMPVRDIITWTEMITAYMEFGLVDLAVDMFNKMPEKNSVSYNA 407

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE--AYFKSMVA 573
           +++G+  +    + L +F  M Q G    + T  GV++AC   GLL + E        + 
Sbjct: 408 LLTGFCKNNEGLKALNLFVRMVQEGAELTDFTLTGVINAC---GLLLKLEISRQIHGFII 464

Query: 574 NYGIEP--CIEHYTSMVSLLGRAGHLDKAAKLIEGI 607
            +G     CIE   +++ +  + G +D A ++ + +
Sbjct: 465 KFGFRSNACIE--AALIDMCSKCGRMDDADRMFQSL 498



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 133/572 (23%), Positives = 255/572 (44%), Gaps = 80/572 (13%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N +S+   L +CI++ +L+  + +H   +K G    +F  N L+ +Y K   L  A  
Sbjct: 200 EPNEYSFVAILTACIRSLELEMGLQVHALAIKLGYSQLVFVANALIGLYGKCGCLDHAIH 259

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHR-EGHELNPFAFTAFLKVLVSMG 171
           LFDEMP+R+  S+ T I        + +A+ LF  L++ +G + + F  +  L       
Sbjct: 260 LFDEMPQRDIASWNTMISSLVKGLSYEKALELFRVLNQNKGFKADQFTLSTLLTACARCH 319

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--------------- 216
                  + A   ++G ++N  V  A+I  ++ CG +     +F+               
Sbjct: 320 ARIQGREIHAYAIRIGLENNLSVSNAIIGFYTRCGSLNHVAALFERMPVRDIITWTEMIT 379

Query: 217 ------------GLFNDCFE--------------------EALNFFSQMRAVGFKPNNFT 244
                        +FN   E                    +ALN F +M   G +  +FT
Sbjct: 380 AYMEFGLVDLAVDMFNKMPEKNSVSYNALLTGFCKNNEGLKALNLFVRMVQEGAELTDFT 439

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
              V+ AC  L  + +++  HG  +K  +  +  +  AL+D+ +K G + +A R+F+ + 
Sbjct: 440 LTGVINACGLLLKLEISRQIHGFIIKFGFRSNACIEAALIDMCSKCGRMDDADRMFQSLS 499

Query: 305 KK--DVIPWSFMIARYAQTDLSIDAVELFCRMR-QAFVAPNQFTFVSVLQACATMEGLDL 361
               + I  + MI  YA+  L  +A+ LF R + +  +  ++  F S+L  C T+   ++
Sbjct: 500 TDGGNSIIQTSMICGYARNGLPEEAICLFYRCQSEGTMVLDEVAFTSILGVCGTLGFHEV 559

Query: 362 GNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQ 421
           G QIH   ++ G  +++ V N+++ +Y+KC  ++++++ F   P  + V+WN +I G + 
Sbjct: 560 GKQIHCQALKTGFHAELGVGNSIISMYSKCYNIDDAIKAFNTMPGHDVVSWNGLIAGQLL 619

Query: 422 LGEVGKAMIMFSKMLEEQVPATEVTY-----------SSVLRACASLAALEPGMQVHCLT 470
             +  +A+ ++S M +  +    +T+           S++L  C SL           L+
Sbjct: 620 HRQGDEALAIWSSMEKAGIKPDAITFVLIVSAYKFTSSNLLDECRSLF----------LS 669

Query: 471 VKANYDMDVVVAN--ALIDMYAKCGSITDARLVFDMMNDWNEVS-WNAMISGYSMHG--- 524
           +K  +D++    +  +L+ +    G + +A  + + M    EVS W A++ G  +H    
Sbjct: 670 MKMIHDLEPTSEHYASLVGVLGYWGLLEEAEELINKMPFDPEVSVWRALLDGCRLHANTS 729

Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS 556
           +   V K    M+ R   P+    V  L A S
Sbjct: 730 IGKRVAKHIIGMEPRD--PSTYVLVSNLYAAS 759



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 113/490 (23%), Positives = 208/490 (42%), Gaps = 64/490 (13%)

Query: 21  INAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHC 80
           I++ ++GLS + AL   +  N       F   +F   + +T L +C +         IH 
Sbjct: 276 ISSLVKGLSYEKALELFRVLNQNKG---FKADQF---TLSTLLTACARCHARIQGREIHA 329

Query: 81  QVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP---------------------- 118
             ++ G   +L  +N ++  Y +   L     LF+ MP                      
Sbjct: 330 YAIRIGLENNLSVSNAIIGFYTRCGSLNHVAALFERMPVRDIITWTEMITAYMEFGLVDL 389

Query: 119 ---------ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
                    E+N++S+   + G+  +++ ++A+ LF  + +EG EL  F  T  +     
Sbjct: 390 AVDMFNKMPEKNSVSYNALLTGFCKNNEGLKALNLFVRMVQEGAELTDFTLTGVINACGL 449

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND-------- 221
           +   E+   +   + K G  SNA +  ALID  S CG ++ A ++F  L  D        
Sbjct: 450 LLKLEISRQIHGFIIKFGFRSNACIEAALIDMCSKCGRMDDADRMFQSLSTDGGNSIIQT 509

Query: 222 ----------CFEEALNFFSQMRAVG-FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALK 270
                       EEA+  F + ++ G    +   F  +L  C  L    V K  H  ALK
Sbjct: 510 SMICGYARNGLPEEAICLFYRCQSEGTMVLDEVAFTSILGVCGTLGFHEVGKQIHCQALK 569

Query: 271 TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVEL 330
           T +  +L V  +++ +Y+K   I +A + F  MP  DV+ W+ +IA         +A+ +
Sbjct: 570 TGFHAELGVGNSIISMYSKCYNIDDAIKAFNTMPGHDVVSWNGLIAGQLLHRQGDEALAI 629

Query: 331 FCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSN----ALMD 386
           +  M +A + P+  TFV ++ A       +L ++  SL + + ++ D+  ++    +L+ 
Sbjct: 630 WSSMEKAGIKPDAITFVLIVSA-YKFTSSNLLDECRSLFLSMKMIHDLEPTSEHYASLVG 688

Query: 387 VYAKCGRMENSVELFAESPKRNHVT-WNTMIVGYVQLG--EVGKAMIMFSKMLEEQVPAT 443
           V    G +E + EL  + P    V+ W  ++ G        +GK +      +E + P+T
Sbjct: 689 VLGYWGLLEEAEELINKMPFDPEVSVWRALLDGCRLHANTSIGKRVAKHIIGMEPRDPST 748

Query: 444 EVTYSSVLRA 453
            V  S++  A
Sbjct: 749 YVLVSNLYAA 758


>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Vitis vinifera]
          Length = 731

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 244/624 (39%), Positives = 359/624 (57%), Gaps = 44/624 (7%)

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           ALN ++Q+R + F+ +NF    VLKAC  +   ++ K  HG  LK   + D++V  AL+ 
Sbjct: 108 ALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALML 167

Query: 286 LYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFT 345
           +Y +   +  AR +F++M ++DV+ WS MI   ++      A+EL   M    V P++  
Sbjct: 168 MYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVA 227

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFV--SNALMDVYAKCG----------- 392
            VS++   A    + +G  +H+ V+R      + V  + AL+D+YAKCG           
Sbjct: 228 MVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNG 287

Query: 393 --------------------RMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMF 432
                               R+E +  LF  +  R+ + W  M+  Y Q   + +A  +F
Sbjct: 288 LTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLF 347

Query: 433 SKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKC 492
            +M    V  T+VT  S+L  CA   AL+ G  VH    K   ++D ++  AL+DMYAKC
Sbjct: 348 DQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKC 407

Query: 493 GSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL 552
           G I  A  +F      +   WNA+I+G++MHG   E L +F  M+++G +PN++TF+G+L
Sbjct: 408 GDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLL 467

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
            ACS+ GL+ +G+  F+ MV  +G+ P IEHY  MV LLGRAG LD+A ++I+ +P +P+
Sbjct: 468 HACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPN 527

Query: 613 VMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA----- 667
            ++W AL+ AC +H N ++G L+A  +L+ EPE+   +VL+SNIYA A  W  AA     
Sbjct: 528 TIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKT 587

Query: 668 ------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAV 721
                  KEPG S IE  G VH F  GD SH  +  I  ML  +  K  +AGY+PD S V
Sbjct: 588 MKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTV 647

Query: 722 LRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQR 781
           L ++ E+EKE  L  HSEKLA+AF L    PS+PIRI+KNLR+C DCH A K++SKI  R
Sbjct: 648 LLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGR 707

Query: 782 EIIIRDVHRFHHFQDGCCSCGDFW 805
            II+RD +RFHHF++G CSCGD+W
Sbjct: 708 VIIVRDRNRFHHFREGYCSCGDYW 731



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 132/531 (24%), Positives = 227/531 (42%), Gaps = 78/531 (14%)

Query: 50  SVSEFNSHSYATSLQSCIQND--DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRL 107
           S  +FN     T   S  Q+D   L+    IH  ++K         T+    + + LN  
Sbjct: 32  STLKFNPTPLQTPPTSPSQHDLSTLEQTKQIHAHIIK---------THFHHALQIPLNDF 82

Query: 108 PDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVL 167
           P        +      +FV T   YT  +Q   A+ +++ L +   E++ F   + LK  
Sbjct: 83  PSG------LSPSAQWNFVIT--SYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKAC 134

Query: 168 VSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF-------- 219
             + W +L   +   V K G D + FVG AL+  +  C CVE+AR VFD +         
Sbjct: 135 GQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWS 194

Query: 220 --------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT 271
                   N  F+ AL    +M  +  +P+      ++        +R+ K+ H   ++ 
Sbjct: 195 TMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRN 254

Query: 272 C--YEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIA------------- 316
                M +    ALLD+Y K G +  AR++F  + +K V+ W+ MIA             
Sbjct: 255 SNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARA 314

Query: 317 ------------------RYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
                              YAQ +    A  LF +MR + V P + T VS+L  CA    
Sbjct: 315 LFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGA 374

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           LDLG  +HS + +  +  D  ++ AL+D+YAKCG +  +  LF E+  R+   WN +I G
Sbjct: 375 LDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITG 434

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ-----VHCLTVKA 473
           +   G   +A+ +F++M  + V   ++T+  +L AC+    +  G +     VH   +  
Sbjct: 435 FAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVP 494

Query: 474 NYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
             +        ++D+  + G + +A  ++  M    N + W A+++   +H
Sbjct: 495 QIEH----YGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLH 541



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 170/351 (48%), Gaps = 39/351 (11%)

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV 370
           W+F+I  Y + +   +A+ ++ ++R+     + F   SVL+AC  +    LG +IH  V+
Sbjct: 92  WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 151

Query: 371 RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMI 430
           + GL  DVFV NALM +Y +C  +E +  +F +  +R+ V+W+TMI    +  E   A+ 
Sbjct: 152 KKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALE 211

Query: 431 MFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK--ANYDMDVVVANALIDM 488
           +  +M   QV  +EV   S++   A  A +  G  +H   ++   N  M V    AL+DM
Sbjct: 212 LIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDM 271

Query: 489 YAKCGSITDARLVFDMMNDWNEVSWNAMISG----------------------------- 519
           YAKCG +  AR +F+ +     VSW AMI+G                             
Sbjct: 272 YAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAML 331

Query: 520 --YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
             Y+      +   +FD M+  G RP  +T V +LS C+  G L+ G+ +  S +    +
Sbjct: 332 SAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGK-WVHSYIDKERV 390

Query: 578 E-PCIEHYTSMVSLLGRAGHLDKAAKL-IEGIPFQPSVMIWRALLGACIIH 626
           E  CI + T++V +  + G ++ A +L IE I     + +W A++    +H
Sbjct: 391 EVDCILN-TALVDMYAKCGDINAAGRLFIEAI--SRDICMWNAIITGFAMH 438



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 106/443 (23%), Positives = 191/443 (43%), Gaps = 63/443 (14%)

Query: 47  ITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNR 106
           + F V  F + S    L++C Q    Q    IH  VLKKG   D+F  N L+ +Y +   
Sbjct: 118 MDFEVDNFMAPSV---LKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECAC 174

Query: 107 LPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV 166
           +  A  +FD+M ER+ +S+ T I+  + + +F  A+ L   ++      +  A  + + +
Sbjct: 175 VEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNL 234

Query: 167 LVSMGWAELCPCVFACVYKLGHDSNAFVG----TALIDAFSVCGCVEFARKVFDGLFN-- 220
                   +   + A  Y + + +N  +G    TAL+D ++ CG +  AR++F+GL    
Sbjct: 235 FADTANMRMGKAMHA--YVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKT 292

Query: 221 ---------------------------------------------DCFEEALNFFSQMRA 235
                                                        +C ++A N F QMR 
Sbjct: 293 VVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRT 352

Query: 236 VGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISN 295
            G +P   T   +L  C     + + K  H    K   E+D  +  AL+D+Y K G+I+ 
Sbjct: 353 SGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINA 412

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACAT 355
           A R+F E   +D+  W+ +I  +A      +A+++F  M +  V PN  TF+ +L AC+ 
Sbjct: 413 AGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSH 472

Query: 356 MEGLDLGNQI-HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWN 413
              +  G ++   +V   GL+  +     ++D+  + G ++ + E+    P K N + W 
Sbjct: 473 AGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWG 532

Query: 414 TMIVG-----YVQLGEVGKAMIM 431
            ++         QLGE+    ++
Sbjct: 533 ALVAACRLHKNPQLGELAATQLL 555


>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
 gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
          Length = 571

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 227/569 (39%), Positives = 335/569 (58%), Gaps = 12/569 (2%)

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
           +L+AC     + + ++ HG  +K C          LLD+Y K G +  A  +F+ M  + 
Sbjct: 4   ILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRT 63

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
           V+ W+ +IA YA+  LS +A+ LF  M +  V+P+ FT  +VL ACA    L+ G  +H+
Sbjct: 64  VVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHN 123

Query: 368 LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK 427
            +    + S++FV NALMD+YAKCG ME++  +F E P ++ ++WNTMI GY +     +
Sbjct: 124 YIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNE 183

Query: 428 AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALID 487
           A+ +F  M+ E  P    T + +L ACASLA+L+ G +VH   ++  +  D  VANAL+D
Sbjct: 184 ALSLFGDMVLEMKP-DGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVD 242

Query: 488 MYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLT 547
           MY KCG    ARL+FDM+   + ++W  MI+GY MHG     +  F+ M+Q G  P+ ++
Sbjct: 243 MYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVS 302

Query: 548 FVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGI 607
           F+ +L ACS+ GLL++G  +F  M     ++P +EHY  +V LL R+G L  A K I+ +
Sbjct: 303 FISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSM 362

Query: 608 PFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE--- 664
           P +P   IW ALL  C IH++V++    A+H+ + EPE+   +VLL+N YA A  WE   
Sbjct: 363 PIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEVK 422

Query: 665 --------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIP 716
                   +   K PG SWIE +  VH F AG++SH     I  +L+ L  K ++ GY P
Sbjct: 423 KLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKEEGYFP 482

Query: 717 DLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIIS 776
                L +    +KE  L  HSEKLA+AF +  +PP+  IR+ KNLR+C DCH   K IS
Sbjct: 483 KTRYALINADSLQKETALCGHSEKLAMAFGILNLPPARTIRVSKNLRVCGDCHEMAKFIS 542

Query: 777 KIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           K + REI++RD +RFHHF+DG C C  FW
Sbjct: 543 KTLGREIVLRDSNRFHHFKDGVCCCRGFW 571



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 170/376 (45%), Gaps = 23/376 (6%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFAT--NVLLNVYVKLNRLPDATKLFDEMPER 120
           LQ+C    D+     +H   +K   C+    T  N LL++Y K   L  A  +FD M  R
Sbjct: 5   LQACANCGDVSLGRAVHGSGVKA--CVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVR 62

Query: 121 NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVF 180
             +++ + I  Y       EA+ LF  + REG   + F  T  L      G  E    V 
Sbjct: 63  TVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVH 122

Query: 181 ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFE 224
             + +    SN FV  AL+D ++ CG +E A  VF  +                 N    
Sbjct: 123 NYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPN 182

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           EAL+ F  M  +  KP+  T A +L AC  L ++   K  HG  L+  +  D  VA AL+
Sbjct: 183 EALSLFGDM-VLEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALV 241

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
           D+Y K G    AR +F+ +P KD+I W+ MIA Y       +A+  F  MRQA + P++ 
Sbjct: 242 DMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEV 301

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVV-RVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
           +F+S+L AC+    LD G +  +++     +   +     ++D+ A+ G++  + +    
Sbjct: 302 SFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKS 361

Query: 404 SPKRNHVT-WNTMIVG 418
            P     T W  ++ G
Sbjct: 362 MPIEPDATIWGALLSG 377



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 159/319 (49%), Gaps = 8/319 (2%)

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
            VS+LQACA    + LG  +H   V+  +       N L+D+YAKCG ++ ++ +F    
Sbjct: 1   MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
            R  VTW ++I  Y + G   +A+ +F +M  E V     T ++VL ACA   +LE G  
Sbjct: 61  VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120

Query: 466 VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGL 525
           VH    + +   ++ V NAL+DMYAKCGS+ DA  VF  M   + +SWN MI GYS + L
Sbjct: 121 VHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSL 180

Query: 526 SAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYT 585
             E L +F  M     +P+  T   +L AC++   L++G+     ++ N G     +   
Sbjct: 181 PNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRN-GFFSDQQVAN 238

Query: 586 SMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH--NNVEIGRLSAQHILDFE 643
           ++V +  + G    A  L + IP +  ++ W  ++    +H   N  I   +       E
Sbjct: 239 ALVDMYVKCGVPVLARLLFDMIPTK-DLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIE 297

Query: 644 PEDEATHVLLSNIYAMARS 662
           P++ +    +S +YA + S
Sbjct: 298 PDEVS---FISILYACSHS 313



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 83/333 (24%), Positives = 144/333 (43%), Gaps = 52/333 (15%)

Query: 15  LTHQSKINAWLR-GLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQ 73
           +T  S I A+ R GLS +A     +      +P  F+++        T L +C  N  L+
Sbjct: 65  VTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTIT--------TVLHACACNGSLE 116

Query: 74  TAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYT 133
               +H  + +     ++F  N L+++Y K   + DA  +F EMP ++ IS+ T I GY+
Sbjct: 117 NGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYS 176

Query: 134 VSSQFVEAVGLFSTLHREGHELNPFAFT--AFLKVLVSMGWAELCPCVFACVYKLGHDSN 191
            +S   EA+ LF  +     E+ P   T    L    S+   +    V   + + G  S+
Sbjct: 177 KNSLPNEALSLFGDMVL---EMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSD 233

Query: 192 AFVGTALIDAFSVCGCVEFARKVFD--------------------GLFNDCFEEALNFFS 231
             V  AL+D +  CG    AR +FD                    G  N+    A+  F+
Sbjct: 234 QQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNN----AITTFN 289

Query: 232 QMRAVGFKPNNFTFAFVLKACL-------GLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           +MR  G +P+  +F  +L AC        G     V +    C +K   +++ Y  +  +
Sbjct: 290 EMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDE--CNVKP--KLEHYACI--V 343

Query: 285 DLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
           DL  +SG+++ A +  + MP + D   W  +++
Sbjct: 344 DLLARSGKLAMAYKFIKSMPIEPDATIWGALLS 376


>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 895

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 246/778 (31%), Positives = 415/778 (53%), Gaps = 29/778 (3%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           ++ ++ + + SC +  DL+    +H   ++ G   DL+  N L+++Y +   L +A  +F
Sbjct: 120 DAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVF 179

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           +EM  R+++S+ + I GY  +  + +A+ ++      G   + F  ++ L    S+   +
Sbjct: 180 EEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVK 239

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF---- 223
               V   + K+G   +  +G  L+  +     +  AR+VF  +       +N       
Sbjct: 240 EGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYA 299

Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                E ++  F  M   GF P+  +    ++AC     ++V K  H   + + +E D  
Sbjct: 300 QLGRHEASVKLFMDM-IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTV 358

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
               L+D+Y K G++  A+ +F+    KD + W+ +I  Y Q+    + +E F +M +  
Sbjct: 359 ACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKME 417

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
             P+  TFV +L   + +  ++ G  IH  V++ G  +++ + N+L+DVYAKCG M++ +
Sbjct: 418 RKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLL 477

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
           ++F+     + ++WNT+I   V   +      M ++M  E +   E T   +L  C+ LA
Sbjct: 478 KVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLA 537

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
               G ++H    K+ ++ +V + NALI+MY+KCGS+ +   VF  M + + V+W A+IS
Sbjct: 538 VRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALIS 597

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
            + M+G   + LK F  M+  G  P+++ F+  + ACS+ G++++G  +F  M  +Y +E
Sbjct: 598 AFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLE 657

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P +EHY  +V LL R+G L +A + I  +P +P   +W ALL AC    N  I +  ++ 
Sbjct: 658 PRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKK 717

Query: 639 ILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRA 687
           IL+   +D   +VL+SNIYA    W+           K   KEPG SWIE Q  V+ FR 
Sbjct: 718 ILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRT 777

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFAL 747
           GD S    + ++ +LE+L     K GY+ DL   L DV ED+K   L  HSE+LA+AF L
Sbjct: 778 GDKSFEQYDKVKDLLEYLVRLMAKEGYVADLQFALHDVEEDDKRDMLCGHSERLAIAFGL 837

Query: 748 FKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
               P SP+ ++KNLR+C DCHT  K I+KI+QREI++RD +RFH F+DG CSCGD W
Sbjct: 838 LNTKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFHRFKDGACSCGDHW 895



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 163/602 (27%), Positives = 290/602 (48%), Gaps = 28/602 (4%)

Query: 39  CSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLL 98
           CSN   TP      EF   S   +L S      L+T   +H  ++  G  L +  +  L+
Sbjct: 7   CSNFNNTPE--PSQEFLRSSLLKTLSSAKNTPQLRT---VHSLIITSGLSLSVIFSGKLI 61

Query: 99  NVYVKLNRLPDATKLFDEM-PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNP 157
           + Y ++     +  +F  + P  N   + + I+  T +  F +A+G ++ +  +  + + 
Sbjct: 62  SKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDA 121

Query: 158 FAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG 217
           F F + +     +   EL   V     ++G +S+ ++G ALID +S    ++ AR VF+ 
Sbjct: 122 FTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEE 181

Query: 218 L----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVA 261
           +                 N  +E+AL+ + + R  G  P+ FT + VL AC  L  ++  
Sbjct: 182 MSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEG 241

Query: 262 KSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQT 321
            + HG   K     D+ +   LL +Y K   +  ARR+F +M  KD + W+ MI  YAQ 
Sbjct: 242 VAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQL 301

Query: 322 DLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVS 381
                +V+LF  M   FV P+  +  S ++AC     L +G  +H  ++  G   D    
Sbjct: 302 GRHEASVKLFMDMIDGFV-PDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVAC 360

Query: 382 NALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVP 441
           N L+D+YAKCG +  + E+F  +  ++ VTWN++I GY Q G   + +  F  M  E+ P
Sbjct: 361 NILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERKP 420

Query: 442 ATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLV 501
            + VT+  +L   + LA +  G  +HC  +K  ++ ++++ N+L+D+YAKCG + D   V
Sbjct: 421 DS-VTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKV 479

Query: 502 FDMMNDWNEVSWNAMISGYSMHGLSAEV-LKVFDLMQQRGWRPNNLTFVGVLSACSNGGL 560
           F  M+  + +SWN +I+  S+H     V  ++ + M+  G  P+  T +G+L  CS   +
Sbjct: 480 FSYMSAHDIISWNTVIAS-SVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAV 538

Query: 561 LEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
             QG+      +   G E  +    +++ +  + G L+   K+ + +  +  V+ W AL+
Sbjct: 539 RRQGKE-IHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMK-EKDVVTWTALI 596

Query: 621 GA 622
            A
Sbjct: 597 SA 598



 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 124/413 (30%), Positives = 227/413 (54%), Gaps = 4/413 (0%)

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           N  F +AL ++++MR    +P+ FTF  V+ +C  +  + +    H  A++  +E DLY+
Sbjct: 99  NGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYI 158

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
             AL+D+Y++  ++ NAR +FEEM  +D + W+ +I+ Y       DA++++ + R   +
Sbjct: 159 GNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGM 218

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
            P+ FT  SVL AC ++  +  G  +H ++ ++G+  DV + N L+ +Y K  R+  +  
Sbjct: 219 VPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARR 278

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +F++   ++ VTWNTMI GY QLG    ++ +F  M++  VP   ++ +S +RAC     
Sbjct: 279 VFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFVPDM-LSITSTIRACGQSGD 337

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
           L+ G  VH   + + ++ D V  N LIDMYAKCG +  A+ VFD     + V+WN++I+G
Sbjct: 338 LQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLING 397

Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
           Y+  G   E L+ F +M+    +P+++TFV +LS  S    + QG       V  +G E 
Sbjct: 398 YTQSGYYKEGLESFKMMKME-RKPDSVTFVLLLSIFSQLADINQGRG-IHCDVIKFGFEA 455

Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIG 632
            +    S++ +  + G +D   K+   +     ++ W  ++ + +  ++  +G
Sbjct: 456 ELIIGNSLLDVYAKCGEMDDLLKVFSYMSAH-DIISWNTVIASSVHFDDCTVG 507



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 197/399 (49%), Gaps = 6/399 (1%)

Query: 262 KSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM-PKKDVIPWSFMIARYAQ 320
           ++ H   + +   + +  +  L+  Y +  +  ++  +F  + P  +V  W+ +I     
Sbjct: 39  RTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTH 98

Query: 321 TDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFV 380
             L   A+  +  MR+  + P+ FTF SV+ +CA +  L+LG  +H   + +G  SD+++
Sbjct: 99  NGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYI 158

Query: 381 SNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQV 440
            NAL+D+Y++   ++N+  +F E   R+ V+WN++I GY   G    A+ M+ K     +
Sbjct: 159 GNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGM 218

Query: 441 PATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARL 500
                T SSVL AC SL A++ G+ VH +  K     DV++ N L+ MY K   + +AR 
Sbjct: 219 VPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARR 278

Query: 501 VFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVF-DLMQQRGWRPNNLTFVGVLSACSNGG 559
           VF  M   + V+WN MI GY+  G     +K+F D++   G+ P+ L+    + AC   G
Sbjct: 279 VFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID--GFVPDMLSITSTIRACGQSG 336

Query: 560 LLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRAL 619
            L+ G+   K ++ + G E        ++ +  + G L  A ++ +    + SV  W +L
Sbjct: 337 DLQVGKFVHKYLIGS-GFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSV-TWNSL 394

Query: 620 LGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYA 658
           +         + G  S + +      D  T VLL +I++
Sbjct: 395 INGYTQSGYYKEGLESFKMMKMERKPDSVTFVLLLSIFS 433



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 147/292 (50%), Gaps = 4/292 (1%)

Query: 331 FCRMRQAFVAPNQ-FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYA 389
           FC        P+Q F   S+L+  ++ +       +HSL++  GL   V  S  L+  YA
Sbjct: 6   FCSNFNNTPEPSQEFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYA 65

Query: 390 KCGRMENSVELFAE-SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYS 448
           +     +SV +F   SP  N   WN++I      G   +A+  +++M E+++     T+ 
Sbjct: 66  QVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFP 125

Query: 449 SVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDW 508
           SV+ +CA +  LE G  VH   ++  ++ D+ + NALIDMY++   + +AR VF+ M++ 
Sbjct: 126 SVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNR 185

Query: 509 NEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYF 568
           + VSWN++ISGY  +G   + L ++   +  G  P+  T   VL AC +   +++G A  
Sbjct: 186 DSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVA-V 244

Query: 569 KSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
             ++   GI   +     ++S+  +   L +A ++   +  + SV  W  ++
Sbjct: 245 HGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSV-TWNTMI 295


>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
 gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 238/655 (36%), Positives = 380/655 (58%), Gaps = 28/655 (4%)

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF---------------DGLF-NDC 222
           + A +   G   N F+  +L++A+  CG +  A+++F                GL  NDC
Sbjct: 43  IHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKNDC 102

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
           F EA++ F +M    FKPN  T + VL A   L  IR+AKS H   ++  +E +++V  A
Sbjct: 103 FVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETA 162

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+D+Y+K G +  AR++FE M +++V+ W+ +++ Y+    S +A++LF  MR+  +  +
Sbjct: 163 LVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVD 222

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
            +T +S++ A  ++  L +G  IH  ++R G  +D  +  ALMD+Y     ++++  +F+
Sbjct: 223 FYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFS 282

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ-VPATEVTYSSVLRACASLAALE 461
           E   ++   W  M+ G+       +A+  F+KML  Q +    +    +L +C+   AL+
Sbjct: 283 EMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQ 342

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
            G +VH L +K  +  ++ V +A+IDMYA CG++ DA+  F  M + + V WNAMI+G  
Sbjct: 343 QGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNG 402

Query: 522 MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
           M+G   + + +F  M+  G  P+  TFV VL ACS+ G++ +G   F  MV    + P +
Sbjct: 403 MNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPNL 462

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
           +HY  ++ +LGRAG LD A   I  +PFQP   ++  LLGAC IH N+++G   +Q I +
Sbjct: 463 QHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFE 522

Query: 642 FEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDT 690
            EP D   +VLLSN+YA+A +WE           K   K+PG S IE    ++ F AG+ 
Sbjct: 523 MEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRMKKDPGFSSIEINQEIYTFMAGEK 582

Query: 691 SHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKM 750
            H     I G+L+ L +K +KAGY+P+ + +L+DV +D K+  L+ HSEK+A+AF L + 
Sbjct: 583 DHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAIAFGLMRT 642

Query: 751 PPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            P + IRI KNLR C DCHTA K +SK+  R ++I+D +RFH FQDG CSC D+W
Sbjct: 643 KPETIIRITKNLRTCDDCHTASKFVSKVFGRVLVIKDANRFHVFQDGVCSCRDYW 697



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 219/446 (49%), Gaps = 18/446 (4%)

Query: 71  DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQ 130
           DL+    IH Q++  G   + F +N L+N YV    L DA ++F   P +N +S+   I 
Sbjct: 36  DLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILIS 95

Query: 131 GYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDS 190
           G   +  FVEA+ +F  +     + N    ++ L    ++G   +   V     + G + 
Sbjct: 96  GLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEG 155

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFD---------------GLFNDCF-EEALNFFSQMR 234
           N FV TAL+D +S  GC+  AR++F+               G  +  F EEA++ F+ MR
Sbjct: 156 NVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMR 215

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
             G   + +T   ++ A L +  ++V    HG  ++T YE D ++  AL+D+Y     + 
Sbjct: 216 RKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVD 275

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ-AFVAPNQFTFVSVLQAC 353
           +A R+F EM  KDV  W+ M+  ++       A++ F +M     +  +    + +L +C
Sbjct: 276 DAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSC 335

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
           +    L  G ++H+L ++    +++FV +A++D+YA CG +E++   F    +++ V WN
Sbjct: 336 SHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWN 395

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
            MI G    G    A+ +F +M    +   E T+ SVL AC+    +  G+Q+    VK 
Sbjct: 396 AMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKT 455

Query: 474 NYDMDVVVANA-LIDMYAKCGSITDA 498
           ++ +  +   A +ID+  + G +  A
Sbjct: 456 SHVIPNLQHYACVIDILGRAGQLDAA 481



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 97/373 (26%), Positives = 191/373 (51%), Gaps = 11/373 (2%)

Query: 255 LDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFM 314
           L  ++  +  H   + +    + +++ +L++ Y   G +++A++IF   P K+V+ W+ +
Sbjct: 34  LKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTIL 93

Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL 374
           I+  A+ D  ++A+++F  M      PN  T  SVL A A +  + +   +H   VR G 
Sbjct: 94  ISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGF 153

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
             +VFV  AL+D+Y+K G M  + +LF    +RN VTWN ++ GY   G   +A+ +F+ 
Sbjct: 154 EGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNL 213

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGS 494
           M  + +     T  S++ A  S+  L+ G  +H   ++  Y+ D  +  AL+D+Y     
Sbjct: 214 MRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNC 273

Query: 495 ITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD-LMQQRGWRPNNLTFVGVLS 553
           + DA  VF  M+  +  +W  M++G+S        +K F+ ++  +  + +++  +G+LS
Sbjct: 274 VDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILS 333

Query: 554 ACSNGGLLEQGEAYFKSMVANYGIEPCIEHY----TSMVSLLGRAGHLDKAAKLIEGIPF 609
           +CS+ G L+QG       V    I+ C  +     ++++ +    G+L+ A +   G+  
Sbjct: 334 SCSHSGALQQGRR-----VHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMG- 387

Query: 610 QPSVMIWRALLGA 622
           +  V+ W A++  
Sbjct: 388 EKDVVCWNAMIAG 400



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L SC  +  LQ    +H   +K     ++F  + ++++Y     L DA + F  M E++ 
Sbjct: 332 LSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDV 391

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVL 167
           + +   I G  ++    +A+ LF  L  +G  L+P   T F+ VL
Sbjct: 392 VCWNAMIAGNGMNGYGTDAIDLF--LQMKGSGLDPDEST-FVSVL 433


>gi|357151953|ref|XP_003575959.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Brachypodium distachyon]
          Length = 689

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 249/595 (41%), Positives = 347/595 (58%), Gaps = 15/595 (2%)

Query: 226 ALNFFSQMRAVGFKPNNFTF--AFVLKACLGLDTIRVAKSAHGCALKTCY-EMDLYVAVA 282
           AL+ F+ M  VG +PN+FTF  AF   AC       V    H  AL+  Y   D +V+ A
Sbjct: 95  ALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTVGPQIHALALRFGYLPGDPFVSCA 154

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
            +D+Y K+G +  ARR+FEEMP ++VI W+ ++         ++  + +  +R+A   PN
Sbjct: 155 AMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVIDGRPLETFKAYFGLREAGGMPN 214

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
             +  +   ACA    L LG Q H  VV  G   DV VSNA++D Y KC     +  +F 
Sbjct: 215 VVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVDFYGKCRCAGKARAVFD 274

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
               RN V+W +MIV Y Q G    A+ ++          T+   SSVL  CA L  L  
Sbjct: 275 GMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTCAGLLGLNF 334

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G  +H + V++  D ++ VA+AL+DMY KCG + DA  VF  M + N V+WNAMI GY+ 
Sbjct: 335 GRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLVTWNAMIGGYAH 394

Query: 523 HGLSAEVLKVFDLM-QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
            G +   L VFD M +  G  PN++T V V++ACS GGL + G   F +M   +G+EP  
Sbjct: 395 IGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGGLTKDGYELFDTMRERFGVEPRT 454

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
           EHY  +V LLGRAG  ++A ++I+ +P +PS+ +W ALLGAC +H   E+GR++++ + +
Sbjct: 455 EHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGALLGACKMHGKTELGRIASEKLFE 514

Query: 642 FEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDT 690
            +P+D   HVLLSN+ A A  W +A             KEPG SWI  + +VH F A DT
Sbjct: 515 LDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNVGIKKEPGCSWITWKNVVHVFYAKDT 574

Query: 691 SHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKM 750
            H   + I+ +L  L  + + +GY+PD    L DV E+EKE  ++ HSEKLALAF L  +
Sbjct: 575 KHDRNSEIQALLAKLKKQMQASGYMPDTQYSLYDVEEEEKETEVFQHSEKLALAFGLIHI 634

Query: 751 PPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           PPS PIRI KNLRICVDCH A K +S IV REII+RD +RFH+F+   CSC D+W
Sbjct: 635 PPSVPIRITKNLRICVDCHRAFKFVSGIVGREIIVRDNNRFHYFKQFECSCKDYW 689



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 122/489 (24%), Positives = 220/489 (44%), Gaps = 25/489 (5%)

Query: 60  ATSLQSCIQNDDLQTAMTIHCQVLKK-GNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
             + ++ I +   +     H + L+     L  F    L+N+Y KL+    A       P
Sbjct: 13  GAAFEAAISSRSPRLGRAAHARALRLLSPGLPPFICAHLVNLYSKLDLPAAAASALASDP 72

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG--WAELC 176
               +SF   I G    ++ + A+  F+ + R G   N F F +  K         + + 
Sbjct: 73  NPTVVSFTAFISGAAQHARPLAALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTVG 132

Query: 177 PCVFACVYKLGH-DSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF------------ 223
           P + A   + G+   + FV  A +D +   GC+  AR++F+ + N               
Sbjct: 133 PQIHALALRFGYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVI 192

Query: 224 ----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
                E    +  +R  G  PN  +      AC G   + + +  HG  +   ++MD+ V
Sbjct: 193 DGRPLETFKAYFGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVSV 252

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
           + A++D Y K      AR +F+ M  ++ + W  MI  YAQ     DA+ ++   R    
Sbjct: 253 SNAMVDFYGKCRCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGE 312

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
            P  F   SVL  CA + GL+ G  +H++ VR  + +++FV++AL+D+Y KCG +E++ +
Sbjct: 313 EPTDFMVSSVLTTCAGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQ 372

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE-QVPATEVTYSSVLRACASLA 458
           +F + P+RN VTWN MI GY  +G+   A+ +F  M+         +T  +V+ AC+   
Sbjct: 373 VFLDMPERNLVTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGG 432

Query: 459 ALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDARLVFDMMNDWNEVS-WNA 515
             + G ++   T++  + ++    +   ++D+  + G    A  +   M     +S W A
Sbjct: 433 LTKDGYELF-DTMRERFGVEPRTEHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGA 491

Query: 516 MISGYSMHG 524
           ++    MHG
Sbjct: 492 LLGACKMHG 500



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 114/382 (29%), Positives = 185/382 (48%), Gaps = 14/382 (3%)

Query: 249 LKACLGLDTIRVAKSAHGCALKTCYE-MDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
            +A +   + R+ ++AH  AL+     +  ++   L++LY+K    + A       P   
Sbjct: 16  FEAAISSRSPRLGRAAHARALRLLSPGLPPFICAHLVNLYSKLDLPAAAASALASDPNPT 75

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQ--ACATMEGLDLGNQI 365
           V+ ++  I+  AQ    + A+  F  M +  + PN FTF S  +  ACA      +G QI
Sbjct: 76  VVSFTAFISGAAQHARPLAALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTVGPQI 135

Query: 366 HSLVVRVGLL-SDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
           H+L +R G L  D FVS A MD+Y K G +  +  LF E P RN + WN ++   V  G 
Sbjct: 136 HALALRFGYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVIDGR 195

Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA 484
             +    +  + E       V+  +   ACA    L  G Q H   V   +DMDV V+NA
Sbjct: 196 PLETFKAYFGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVSVSNA 255

Query: 485 LIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPN 544
           ++D Y KC     AR VFD M   N VSW +MI  Y+ HG   + L V+   +  G  P 
Sbjct: 256 MVDFYGKCRCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPT 315

Query: 545 NLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEH----YTSMVSLLGRAGHLDKA 600
           +     VL+ C+  GLL  G  + +++ A   +  CI+      +++V + G+ G ++ A
Sbjct: 316 DFMVSSVLTTCA--GLL--GLNFGRALHA-VAVRSCIDANIFVASALVDMYGKCGGVEDA 370

Query: 601 AKLIEGIPFQPSVMIWRALLGA 622
            ++   +P + +++ W A++G 
Sbjct: 371 EQVFLDMP-ERNLVTWNAMIGG 391



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 173/383 (45%), Gaps = 26/383 (6%)

Query: 78  IHCQVLKKGNCL-DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSS 136
           IH   L+ G    D F +   +++Y K   L  A +LF+EMP RN I++   +    +  
Sbjct: 135 IHALALRFGYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVIDG 194

Query: 137 QFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGT 196
           + +E    +  L   G   N  +  AF        +  L       V   G D +  V  
Sbjct: 195 RPLETFKAYFGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVSVSN 254

Query: 197 ALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRAVGFKP 240
           A++D +  C C   AR VFDG+                 +   E+AL  +   R  G +P
Sbjct: 255 AMVDFYGKCRCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEEP 314

Query: 241 NNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIF 300
            +F  + VL  C GL  +   ++ H  A+++C + +++VA AL+D+Y K G + +A ++F
Sbjct: 315 TDFMVSSVLTTCAGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVF 374

Query: 301 EEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQACA----T 355
            +MP+++++ W+ MI  YA    + +A+ +F  M R    +PN  T V+V+ AC+    T
Sbjct: 375 LDMPERNLVTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGGLT 434

Query: 356 MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT-WNT 414
            +G +L + +     R G+         ++D+  + G  E + E+    P R  ++ W  
Sbjct: 435 KDGYELFDTMRE---RFGVEPRTEHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGA 491

Query: 415 MIVGYVQLGEVGKAMIMFSKMLE 437
           ++      G+     I   K+ E
Sbjct: 492 LLGACKMHGKTELGRIASEKLFE 514



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 113/287 (39%), Gaps = 36/287 (12%)

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
           L      H  V+  G  +D+  +N +++ Y K      A  +FD M  RN++S+ + I  
Sbjct: 231 LSLGEQFHGFVVTCGFDMDVSVSNAMVDFYGKCRCAGKARAVFDGMRVRNSVSWCSMIVA 290

Query: 132 YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSN 191
           Y       +A+ ++      G E   F  ++ L     +        + A   +   D+N
Sbjct: 291 YAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTCAGLLGLNFGRALHAVAVRSCIDAN 350

Query: 192 AFVGTALIDAFSVCGCVEFARKVFDGL-----------------FNDCFEEALNFFSQM- 233
            FV +AL+D +  CG VE A +VF  +                   D  + AL  F  M 
Sbjct: 351 IFVASALVDMYGKCGGVEDAEQVFLDMPERNLVTWNAMIGGYAHIGDA-QNALAVFDAMI 409

Query: 234 RAVGFKPNNFTFAFVLKACL-------GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           R+ G  PN+ T   V+ AC        G +     +   G   +T    + Y  V  +DL
Sbjct: 410 RSGGTSPNHITLVNVITACSRGGLTKDGYELFDTMRERFGVEPRT----EHYACV--VDL 463

Query: 287 YTKSGEISNARRIFEEMPKKDVIP-WSFMIAR---YAQTDLSIDAVE 329
             ++G    A  I + MP +  I  W  ++     + +T+L   A E
Sbjct: 464 LGRAGMEERAYEIIQRMPMRPSISVWGALLGACKMHGKTELGRIASE 510



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 12/114 (10%)

Query: 41  NSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLD--LFATNVLL 98
           N+   P  F VS        + L +C     L     +H   ++  +C+D  +F  + L+
Sbjct: 309 NTGEEPTDFMVS--------SVLTTCAGLLGLNFGRALHAVAVR--SCIDANIFVASALV 358

Query: 99  NVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREG 152
           ++Y K   + DA ++F +MPERN +++   I GY        A+ +F  + R G
Sbjct: 359 DMYGKCGGVEDAEQVFLDMPERNLVTWNAMIGGYAHIGDAQNALAVFDAMIRSG 412


>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
 gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
          Length = 805

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 258/752 (34%), Positives = 383/752 (50%), Gaps = 43/752 (5%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D +  + L+ +Y++   L  A  +F ++  ++ + +   I  Y        A+ LF  + 
Sbjct: 61  DGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRIL 120

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
           +EG  L+   F + L    S  +      +  C  + G      V +AL+  +  CG + 
Sbjct: 121 QEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLR 180

Query: 210 FARKVFDGLF-----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKAC 252
            A  +F  L                  N    EAL  F +M  +G  P+  TF  V KAC
Sbjct: 181 DANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKAC 240

Query: 253 LGLDTIRVA--KSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIP 310
               ++R +  K  H C  +T    D+ VA AL++ Y + GEI  AR  F  MP+++ + 
Sbjct: 241 SSSPSLRASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNAVS 300

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV 370
           W+ MIA +AQ    + AVE F  M    V P + T  + L+ C   E L     + ++  
Sbjct: 301 WTSMIAAFAQIG-HLLAVETFHAMLLEGVVPTRSTLFAALEGC---EDLHTARLVEAIAQ 356

Query: 371 RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT-----MIVGYVQLGEV 425
            +G+ +DV +   L+  YA+C   E+++ +F+    R    W+      MI  Y Q  + 
Sbjct: 357 EIGVATDVAIVTDLVMAYARCDGQEDAIRVFS---AREEGEWDAALVTAMIAVYAQCRDR 413

Query: 426 GKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVH-CLTVKANYDMDVVVANA 484
                ++   +E  +    + Y + L ACASLAAL  G Q+H C+      D DV + NA
Sbjct: 414 RSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNA 473

Query: 485 LIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPN 544
           ++ MY +CGS+ DAR  FD M   +E+SWNAM+S  + HG   +   +F  M Q G+   
Sbjct: 474 IVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAE 533

Query: 545 NLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLI 604
            + F+ +LSAC++ GL+E G  +F +M  ++G+ P  EHY  MV LLGR G L  A  ++
Sbjct: 534 RVAFLNLLSACAHAGLVEAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIV 593

Query: 605 EGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE 664
           + +P  P    W AL+GAC I+ + E GR +A+ +L+      A +V L NIY+ A  WE
Sbjct: 594 QAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLELRANHTAAYVALCNIYSAAGRWE 653

Query: 665 KAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAG 713
            AA+           K PG+S IE +  VH F   D SH     I   LE +     +AG
Sbjct: 654 DAAAVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIERAG 713

Query: 714 YIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIK 773
           Y      VL DV E++KE+ L  HSEKLA+AF +   P  S +R+IKNLR+CVDCH A K
Sbjct: 714 YRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHNASK 773

Query: 774 IISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            ISK+  REI++RDV RFHHF+DG CSCGD+W
Sbjct: 774 FISKVFGREIVVRDVRRFHHFKDGACSCGDYW 805


>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Brachypodium distachyon]
          Length = 646

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 234/612 (38%), Positives = 353/612 (57%), Gaps = 29/612 (4%)

Query: 223 FEEALNFFSQMRA----VGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
           F  A+  F +MRA            +    LK+C  L    +  S H  AL++    D +
Sbjct: 35  FHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASLHALALRSGAFADRF 94

Query: 279 VAVALLDLYTK-------SGEISNA-------RRIFEEMPKKDVIPWSFMIARYAQTDLS 324
            A ALL+LY K       S E+  +       R++F+EMP+KDV+ W+ ++   A++   
Sbjct: 95  AANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVSWNTLVLGCAESGRH 154

Query: 325 IDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNAL 384
            +A+ L   M +    P+ FT  SVL   A    +  G ++H    R G   DVFV ++L
Sbjct: 155 GEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSL 214

Query: 385 MDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATE 444
           +D+YA C R + SV++F   P R+ + WN+M+ G  Q G V +A+ +F +ML   +    
Sbjct: 215 IDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMP 274

Query: 445 VTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDM 504
           VT+SS++ AC +LA+L  G Q+H   ++  +D +V ++++LIDMY KCG+++ AR +FD 
Sbjct: 275 VTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDR 334

Query: 505 MNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG 564
           +   + VSW AMI G+++HG + E L +FD M+    +PN++TF+ VL+ACS+ GL+++G
Sbjct: 335 IQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKG 394

Query: 565 EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACI 624
             YF SM  +YGI P +EH+ ++   LGR G L++A   I G+  +P+  +W  LL AC 
Sbjct: 395 WKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMKIKPTASVWSTLLRACK 454

Query: 625 IHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGL 673
           +H N  +    A+ I D EP    +H++LSN Y+ +  W +AA            KEP  
Sbjct: 455 VHKNTVLAEEVAKKIFDLEPRSMGSHIILSNTYSSSGRWNEAAHLRKSMRKKGMQKEPAC 514

Query: 674 SWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERY 733
           SWIE +   H F A D SH     I   L   + +  + GY+P+   V +D+ E++K   
Sbjct: 515 SWIEVKNKQHVFVAHDKSHPWYERIIDALNVFSEQMVRQGYVPNTDDVFQDIEEEQKNSV 574

Query: 734 LWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHH 793
           L  HSEKLA+ F +   PP + IR++KNLR+CVDCHT  K ISKIV REI++RD +RFHH
Sbjct: 575 LCGHSEKLAIVFGIISTPPGTTIRVMKNLRVCVDCHTVTKFISKIVGREIVMRDANRFHH 634

Query: 794 FQDGCCSCGDFW 805
           F+DG CSCGDFW
Sbjct: 635 FKDGICSCGDFW 646



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 187/391 (47%), Gaps = 32/391 (8%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT------ 111
           S   +L+SC          ++H   L+ G   D FA N LLN+Y KL   P  +      
Sbjct: 60  SLPGALKSCAALGLRALGASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGS 119

Query: 112 --------KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAF 163
                   K+FDEMPE++ +S+ T + G   S +  EA+GL   + R+G + + F  ++ 
Sbjct: 120 AVVLESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSV 179

Query: 164 LKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF---- 219
           L +            +     + G   + FVG++LID ++ C   +++ KVFD L     
Sbjct: 180 LPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDA 239

Query: 220 ------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGC 267
                       N   +EAL  F +M   G KP   TF+ ++ AC  L ++ + K  H  
Sbjct: 240 ILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAY 299

Query: 268 ALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDA 327
            ++  ++ +++++ +L+D+Y K G +S ARRIF+ +   D++ W+ MI  +A    + +A
Sbjct: 300 VIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREA 359

Query: 328 VELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMD 386
           + LF RM    + PN  TF++VL AC+    +D G    +S+    G++  +    AL D
Sbjct: 360 LVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALAD 419

Query: 387 VYAKCGRMENSVELFAESP-KRNHVTWNTMI 416
              + G++E +    +    K     W+T++
Sbjct: 420 TLGRPGKLEEAYNFISGMKIKPTASVWSTLL 450



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 167/339 (49%), Gaps = 18/339 (5%)

Query: 204 VCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKS 263
           V GC E  R            EAL    +M   G KP++FT + VL        +R    
Sbjct: 145 VLGCAESGRH----------GEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGME 194

Query: 264 AHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDL 323
            HG A +  +  D++V  +L+D+Y        + ++F+ +P +D I W+ M+A  AQ   
Sbjct: 195 LHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGS 254

Query: 324 SIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNA 383
             +A+ LF RM  + + P   TF S++ AC  +  L LG Q+H+ V+R G   +VF+S++
Sbjct: 255 VDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSS 314

Query: 384 LMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPAT 443
           L+D+Y KCG +  +  +F      + V+W  MI+G+   G   +A+++F +M    +   
Sbjct: 315 LIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPN 374

Query: 444 EVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RL 500
            +T+ +VL AC+    ++ G + +  ++  +Y +   + +  AL D   + G + +A   
Sbjct: 375 HITFLAVLTACSHAGLVDKGWK-YFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNF 433

Query: 501 VFDMMNDWNEVSWNAMISGYSMHG---LSAEVL-KVFDL 535
           +  M        W+ ++    +H    L+ EV  K+FDL
Sbjct: 434 ISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDL 472



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 16/214 (7%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +S + ++ L    +  D++  M +H    + G   D+F  + L+++Y    R   + K+F
Sbjct: 172 DSFTLSSVLPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVF 231

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D +P R+ I + + + G   +    EA+GLF  +   G +  P  F++ +    ++    
Sbjct: 232 DNLPVRDAILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLL 291

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------- 218
           L   + A V + G D N F+ ++LID +  CG V  AR++FD +                
Sbjct: 292 LGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHA 351

Query: 219 FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKAC 252
            +    EAL  F +M     KPN+ TF  VL AC
Sbjct: 352 LHGPAREALVLFDRMELGNLKPNHITFLAVLTAC 385


>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
          Length = 639

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 236/541 (43%), Positives = 329/541 (60%), Gaps = 17/541 (3%)

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTD-LSIDAVELFCRMR 335
           L+V+ +L  +Y K G + +A R+F+ MP ++V+ W+ ++A  A  D    +A+     MR
Sbjct: 104 LFVSNSLASMYAKFGLLDDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMR 163

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
           +  VAPN +TF SVL AC T   L     +H+  V+ GL SDVFV ++L+D Y K G ++
Sbjct: 164 RDGVAPNAYTFSSVLGACTTPGML---TAVHASTVKAGLDSDVFVRSSLIDAYVKLGDLD 220

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
               +F E   R+ V WN++I G+ Q G+   A+ +F +M +    + + T +SVLRAC 
Sbjct: 221 GGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACT 280

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
            +  LE G QVH   +K  YD D+++ NAL+DMY KCGS+ DA  +F  M   + +SW+ 
Sbjct: 281 GMVMLEAGRQVHAHVLK--YDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWST 338

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           M+SG + +G S E L+VFDLM+ +G  PN++T VGVL ACS+ GL+E G  YF+SM   +
Sbjct: 339 MVSGLAQNGKSVEALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLF 398

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS 635
           GI+P  EH+  MV LLGRAG LD+A + I G+  +P  +IWR LLGAC +H N  +   +
Sbjct: 399 GIQPEREHHNCMVDLLGRAGKLDEAVEFIHGMSLEPDSVIWRTLLGACRMHKNASLAAYA 458

Query: 636 AQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHY 684
           A+ IL  EP+D+   VLLSN YA  R W           ++   KEPG SWIE +  VH 
Sbjct: 459 AREILKLEPDDQGARVLLSNTYADLRQWTDAEKPWKAMRDRGMRKEPGRSWIELEKRVHV 518

Query: 685 FRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALA 744
           F AGD SH   + I   L  L  + +  GY+P    VL+D+  ++KE  L  HSEK+A+ 
Sbjct: 519 FIAGDLSHPCSDTIIQELNRLIGRIKSLGYVPQTEFVLQDLPTEQKEDLLKYHSEKMAIV 578

Query: 745 FALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
           F         PIRI+KNLRIC DCH   K++SK   R I+IRD  RFHHFQDG CSCGD+
Sbjct: 579 FGTMHAVDGKPIRIMKNLRICGDCHAFAKLVSKSEGRVIVIRDPVRFHHFQDGACSCGDY 638

Query: 805 W 805
           W
Sbjct: 639 W 639



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/375 (29%), Positives = 183/375 (48%), Gaps = 29/375 (7%)

Query: 66  CIQNDDLQTAMTIHCQVLKKG-----NCLDLFATNVLLNVYVKLNRLPDATKLFDEMPER 120
           C+++        IH  V   G         LF +N L ++Y K   L DA ++FD MP R
Sbjct: 74  CVRHGTADHGRLIHRHVEAHGPLPHDGAGGLFVSNSLASMYAKFGLLDDALRMFDGMPVR 133

Query: 121 NTISFVTTIQGY-TVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCV 179
           N +++ T +    +   +  EA+     + R+G   N + F++ L    + G   +   V
Sbjct: 134 NVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGACTTPG---MLTAV 190

Query: 180 FACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND----------CFEE---- 225
            A   K G DS+ FV ++LIDA+   G ++  R+VFD +              F +    
Sbjct: 191 HASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDG 250

Query: 226 --ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
             A+  F +M+  GF  N  T   VL+AC G+  +   +  H   LK  Y+ DL +  AL
Sbjct: 251 VGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLK--YDRDLILHNAL 308

Query: 284 LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
           LD+Y K G + +A  +F  MP++DVI WS M++  AQ   S++A+ +F  M+   VAPN 
Sbjct: 309 LDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRVFDLMKSQGVAPNH 368

Query: 344 FTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE-LF 401
            T V VL AC+    ++ G +   S+    G+  +    N ++D+  + G+++ +VE + 
Sbjct: 369 VTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIH 428

Query: 402 AESPKRNHVTWNTMI 416
             S + + V W T++
Sbjct: 429 GMSLEPDSVIWRTLL 443



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 96/214 (44%), Gaps = 21/214 (9%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N++++++ L +C     L     +H   +K G   D+F  + L++ YVKL  L    ++F
Sbjct: 170 NAYTFSSVLGACTTPGMLTA---VHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVF 226

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           DEM  R+ + + + I G+  S   V A+ LF  +   G   N    T+ L+    M   E
Sbjct: 227 DEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLE 286

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF---------------DGLF 219
               V A V K  +D +  +  AL+D +  CG +E A  +F                GL 
Sbjct: 287 AGRQVHAHVLK--YDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLA 344

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKAC 252
            N    EAL  F  M++ G  PN+ T   VL AC
Sbjct: 345 QNGKSVEALRVFDLMKSQGVAPNHVTMVGVLFAC 378


>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 257/722 (35%), Positives = 387/722 (53%), Gaps = 51/722 (7%)

Query: 95  NVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHE 154
           N +++ Y+  N+   A K+F++MP+R+ IS+   + GY  +     A  LF+ +     E
Sbjct: 95  NAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMP----E 150

Query: 155 LNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKV 214
            +  ++ A L      G+ E    +F  +       N      L+ A+   G +E AR++
Sbjct: 151 KDVVSWNAMLSGFAQNGFVEEARKIFDQMLV----KNEISWNGLLSAYVQNGRIEDARRL 206

Query: 215 FDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
           FD              S+M       N     +V K    LD  R          K  + 
Sbjct: 207 FD--------------SKMDWEIVSWNCLMGGYVRKK--RLDDARSLFDRMPVRDKISWN 250

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
           +       ++  Y ++G +S ARR+FEE+P +DV  W+ M++ + Q  +  +A  +F  M
Sbjct: 251 I-------MITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEM 303

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
            +             +Q+    +  +L +Q+ S         +    N ++  YA+CG +
Sbjct: 304 PEKNEVSWNAMIAGYVQSQQIEKARELFDQMPS--------RNTSSWNTMVTGYAQCGNI 355

Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
           + +  LF E P+R+ ++W  MI GY Q G+  +A+ +F KM  +         +  L +C
Sbjct: 356 DQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSC 415

Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
           A +AALE G Q+H   VKA +    +  NAL+ MY KCGSI +A  VF+ + + + VSWN
Sbjct: 416 AEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWN 475

Query: 515 AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
            MI+GY+ HG   E L +F+ M+    +P+++T VGVLSACS+ G +++G  YF SM  N
Sbjct: 476 TMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQN 534

Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL 634
           YGI    +HYT M+ LLGRAG LD+A  L++ +PF P    W ALLGA  IH + E+G  
Sbjct: 535 YGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEK 594

Query: 635 SAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVH 683
           +A+ + + EP++   +VLLSN+YA +  W           +K   K PG SW+E Q   H
Sbjct: 595 AAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTH 654

Query: 684 YFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLAL 743
            F  GD SH +   I   LE L+++ +K G++     VL DV E+EKE  L  HSEKLA+
Sbjct: 655 IFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAV 714

Query: 744 AFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGD 803
           AF +  +PP  PIR+IKNLR+C DCH AIK ISKI QR+II+RD +RFHHF +G CSCGD
Sbjct: 715 AFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGD 774

Query: 804 FW 805
           +W
Sbjct: 775 YW 776



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 131/555 (23%), Positives = 244/555 (43%), Gaps = 74/555 (13%)

Query: 19  SKINAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTI 78
           S I  W R +SA   +   QC ++ +  +   +   ++ +Y   +   + N+    A   
Sbjct: 58  SDIVKWNRKISAY--MRKGQCESALS--VFNGMRRRSTVTYNAMISGYLSNNKFDCAR-- 111

Query: 79  HCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQF 138
             +V +K    DL + NV+L+ YVK   L  A  LF++MPE++ +S+   + G+  +   
Sbjct: 112 --KVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFV 169

Query: 139 VEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVF----------------AC 182
            EA  +F  +  +    N  ++   L   V  G  E    +F                  
Sbjct: 170 EEARKIFDQMLVK----NEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGY 225

Query: 183 VYKLGHDS-----------NAFVGTALIDAFSVCGCVEFARKVFDGL------------- 218
           V K   D            +      +I  ++  G +  AR++F+ L             
Sbjct: 226 VRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVS 285

Query: 219 ---FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
               N   +EA   F +M     + N  ++  ++   +    I  A+             
Sbjct: 286 GFVQNGMLDEATRIFEEMP----EKNEVSWNAMIAGYVQSQQIEKARE----LFDQMPSR 337

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
           +      ++  Y + G I  A+ +F+EMP++D I W+ MI+ YAQ+  S +A+ LF +M+
Sbjct: 338 NTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMK 397

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
           +     N+      L +CA +  L+LG Q+H  +V+ G  +     NAL+ +Y KCG +E
Sbjct: 398 RDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIE 457

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
            + ++F +  +++ V+WNTMI GY + G   +A+ +F  M +  +   +VT   VL AC+
Sbjct: 458 EAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACS 516

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANA-----LIDMYAKCGSITDARLVFDMMNDW-N 509
               ++ GM+ +  ++  NY    + ANA     +ID+  + G + +A  +   M  + +
Sbjct: 517 HTGFVDKGME-YFNSMYQNYG---ITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPD 572

Query: 510 EVSWNAMISGYSMHG 524
             +W A++    +HG
Sbjct: 573 AATWGALLGASRIHG 587



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 107/449 (23%), Positives = 204/449 (45%), Gaps = 55/449 (12%)

Query: 208 VEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGC 267
           V++ RK+   +     E AL+ F+ MR    + +  T+  ++   L       + +   C
Sbjct: 61  VKWNRKISAYMRKGQCESALSVFNGMR----RRSTVTYNAMISGYL-------SNNKFDC 109

Query: 268 ALKTCYEM---DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLS 324
           A K   +M   DL     +L  Y K+G +S AR +F +MP+KDV+ W+ M++ +AQ    
Sbjct: 110 ARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFV 169

Query: 325 IDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNAL 384
            +A ++F +M    +  N+ ++  +L A      ++   ++    +   ++S     N L
Sbjct: 170 EEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVS----WNCL 221

Query: 385 MDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMF------------ 432
           M  Y +  R++++  LF   P R+ ++WN MI GY Q G + +A  +F            
Sbjct: 222 MGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWT 281

Query: 433 ---------------SKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM 477
                          +++ EE     EV++++++        +E   ++       N   
Sbjct: 282 AMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRN--- 338

Query: 478 DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQ 537
                N ++  YA+CG+I  A+++FD M   + +SW AMISGY+  G S E L +F  M+
Sbjct: 339 -TSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMK 397

Query: 538 QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHL 597
           + G   N       LS+C+    LE G+     +V   G +       +++++ G+ G +
Sbjct: 398 RDGGILNRSALACALSSCAEIAALELGKQLHGRLV-KAGFQTGYIAGNALLAMYGKCGSI 456

Query: 598 DKAAKLIEGIPFQPSVMIWRALLGACIIH 626
           ++A  + E I  +  ++ W  ++     H
Sbjct: 457 EEAFDVFEDIT-EKDIVSWNTMIAGYARH 484



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 107/420 (25%), Positives = 182/420 (43%), Gaps = 59/420 (14%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  S+   L + +QN  ++ A  +    +      ++ + N L+  YV+  RL DA  LF
Sbjct: 183 NEISWNGLLSAYVQNGRIEDARRLFDSKMD----WEIVSWNCLMGGYVRKKRLDDARSLF 238

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D MP R+ IS+   I GY  +    EA  LF  L       + FA+TA +   V  G  +
Sbjct: 239 DRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIR----DVFAWTAMVSGFVQNGMLD 294

Query: 175 LCPCVFACVYKLGHDS-NAFVG--------------------------TALIDAFSVCGC 207
               +F  + +    S NA +                             ++  ++ CG 
Sbjct: 295 EATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGN 354

Query: 208 VEFARKVFDGL-FNDCF---------------EEALNFFSQMRAVGFKPNNFTFAFVLKA 251
           ++ A+ +FD +   DC                EEAL+ F +M+  G   N    A  L +
Sbjct: 355 IDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSS 414

Query: 252 CLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPW 311
           C  +  + + K  HG  +K  ++       ALL +Y K G I  A  +FE++ +KD++ W
Sbjct: 415 CAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSW 474

Query: 312 SFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ-IHSLVV 370
           + MIA YA+     +A+ LF  M+   + P+  T V VL AC+    +D G +  +S+  
Sbjct: 475 NTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQ 533

Query: 371 RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTM-----IVGYVQLGE 424
             G+ ++      ++D+  + GR++ ++ L    P   +  TW  +     I G  +LGE
Sbjct: 534 NYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGE 593



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/342 (22%), Positives = 158/342 (46%), Gaps = 47/342 (13%)

Query: 307 DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIH 366
           D++ W+  I+ Y +      A+ +F  MR+     +  T+ +++    +    D   ++ 
Sbjct: 59  DIVKWNRKISAYMRKGQCESALSVFNGMRRR----STVTYNAMISGYLSNNKFDCARKVF 114

Query: 367 SLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVG 426
             +    L+S     N ++  Y K G +  +  LF + P+++ V+WN M+ G+ Q G V 
Sbjct: 115 EKMPDRDLIS----WNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVE 170

Query: 427 KAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALI 486
           +A  +F +ML +     E++++ +L A      +E   ++      +  D ++V  N L+
Sbjct: 171 EARKIFDQMLVK----NEISWNGLLSAYVQNGRIEDARRL----FDSKMDWEIVSWNCLM 222

Query: 487 DMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNL 546
             Y +   + DAR +FD M   +++SWN MI+GY+ +GL +E  ++F+ +  R    +  
Sbjct: 223 GGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIR----DVF 278

Query: 547 TFVGVLSACSNGGLL-----------EQGEAYFKSMVANYGIEPCIEH------------ 583
            +  ++S     G+L           E+ E  + +M+A Y     IE             
Sbjct: 279 AWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRN 338

Query: 584 ---YTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
              + +MV+   + G++D+A  L + +P Q   + W A++  
Sbjct: 339 TSSWNTMVTGYAQCGNIDQAKILFDEMP-QRDCISWAAMISG 379



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 123/281 (43%), Gaps = 33/281 (11%)

Query: 376 SDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKM 435
           SD+   N  +  Y + G+ E+++ +F    +R+ VT+N MI GY+   +   A  +F KM
Sbjct: 58  SDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKM 117

Query: 436 LEEQVPATEVTYS--------SVLRA---------CASLAALEPGMQVHCLTVKANYDMD 478
            +  + +  V  S        S  RA           S  A+  G   +    +A    D
Sbjct: 118 PDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFD 177

Query: 479 VVVA------NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
            ++       N L+  Y + G I DAR +FD   DW  VSWN ++ GY       +   +
Sbjct: 178 QMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSL 237

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
           FD M  R    + +++  +++  +  GLL +    F+ +         +  +T+MVS   
Sbjct: 238 FDRMPVR----DKISWNIMITGYAQNGLLSEARRLFEELPIR-----DVFAWTAMVSGFV 288

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGR 633
           + G LD+A ++ E +P +  V  W A++   +    +E  R
Sbjct: 289 QNGMLDEATRIFEEMPEKNEVS-WNAMIAGYVQSQQIEKAR 328



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 76/168 (45%), Gaps = 10/168 (5%)

Query: 476 DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDL 535
           D D+V  N  I  Y + G    A  VF+ M   + V++NAMISGY  +       KVF+ 
Sbjct: 57  DSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEK 116

Query: 536 MQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAG 595
           M  R    + +++  +LS     G L    A F  M      E  +  + +M+S   + G
Sbjct: 117 MPDR----DLISWNVMLSGYVKNGNLSAARALFNQMP-----EKDVVSWNAMLSGFAQNG 167

Query: 596 HLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFE 643
            +++A K+ + +  +  +  W  LL A + +  +E  R      +D+E
Sbjct: 168 FVEEARKIFDQMLVKNEIS-WNGLLSAYVQNGRIEDARRLFDSKMDWE 214


>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial [Vitis vinifera]
          Length = 875

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 266/786 (33%), Positives = 433/786 (55%), Gaps = 38/786 (4%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           ++ ++  + + L++C    DL     +H +V+K G   D      LL +Y +++ L DA 
Sbjct: 96  TQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDAC 155

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
           K FD MP R+ +++ + +  +  + Q  E + +FS +  E  E +     +  +    +G
Sbjct: 156 KAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELG 215

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL------------- 218
              L   V   V +   +SNA +  +LI  +   G +  A ++F+ +             
Sbjct: 216 SLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMIS 275

Query: 219 -FND--CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
            +N   CF+EALN F++M+    +PN  T   VL AC  L  ++  +S HG  ++   + 
Sbjct: 276 CYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDP 335

Query: 276 DL-YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
           +L ++  AL++LY  +G + +  ++FE + +K ++ W+ +I+ + +     +A+ LF +M
Sbjct: 336 ELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQM 395

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
           +   + P+ ++  S L AC T+    LG QIH  +++ G  +D FV NAL+D+YAKCG +
Sbjct: 396 QTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFND-FVQNALIDMYAKCGFV 454

Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
            ++ ++F +  +++ VTWN+MI G+ Q G   +A+ +F +M    V   ++T+ SV++AC
Sbjct: 455 HSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQAC 514

Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
           + L  LE G  VH   +      D  +  AL DMY+KCG +  A  VFD M++ + VSW+
Sbjct: 515 SHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWS 574

Query: 515 AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
            MI+GY MHG     + +F+ M   G +PN++TF+ +LSACS+ G +E+G+ YF SM + 
Sbjct: 575 VMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSM-SE 633

Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL 634
           +G+EP  +H+  MV LL RAG L+ A ++I  +PF  +  IW ALL  C IH  ++I + 
Sbjct: 634 FGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKS 693

Query: 635 SAQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVH 683
             +++LD +  D   + LLSNIYA   +W+           K   K PG S IE    ++
Sbjct: 694 IEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIY 753

Query: 684 YFRAGDTSHADMNIIRGMLEWLNMKSRKAGYI----PDLSAVLRDVREDEKERYLWVHSE 739
            F  GDTSH+    I   LE  N +S     +    PD S V     +  KE  +  HSE
Sbjct: 754 RFGPGDTSHSQTKDIYRFLE--NFRSLVHAQVYDSEPDNSIV--GTSKFNKENNVVSHSE 809

Query: 740 KLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCC 799
           KLA+AF +    P + +RI KNLR+C DCH+  KI SKI  REII+RD++RFH F++G C
Sbjct: 810 KLAIAFGIINTRPGTTLRISKNLRVCRDCHSFAKIASKITGREIIMRDLNRFHCFRNGSC 869

Query: 800 SCGDFW 805
           SC D+W
Sbjct: 870 SCNDYW 875



 Score =  244 bits (623), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 187/723 (25%), Positives = 352/723 (48%), Gaps = 58/723 (8%)

Query: 93  ATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTL-HRE 151
           A+  L+  Y ++     + ++FD  P+ ++  +   I+ Y     F EAV L+  + +++
Sbjct: 35  ASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQD 94

Query: 152 GHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFA 211
             +++ F F + LK     G   +   V   V K G +S+A V T+L+  +    C++ A
Sbjct: 95  QTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDA 154

Query: 212 RKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGL 255
            K FD +                 N    E L+ FSQM +   +P++ T   V +AC  L
Sbjct: 155 CKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSEL 214

Query: 256 DTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMI 315
            ++R+ +S HG  ++   E +  +  +L+ +Y K G++ +A R+FE +P +   PW+ MI
Sbjct: 215 GSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMI 274

Query: 316 ARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLL 375
           + Y Q+    +A+ +F +M++  + PNQ T V VL ACA +  +  G  +H  V+R  + 
Sbjct: 275 SCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMD 334

Query: 376 SDV-FVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
            ++ F+  ALM++YA  G + +  ++F    ++  ++WNT+I  + + G+  +A+++F +
Sbjct: 335 PELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQ 394

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGS 494
           M  + +     + +S L AC +++  + G Q+H   +K   + +  V NALIDMYAKCG 
Sbjct: 395 MQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTG-NFNDFVQNALIDMYAKCGF 453

Query: 495 ITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSA 554
           +  A  +F+ + + + V+WN+MI G+S +G S E + +FD M     + + LTF+ V+ A
Sbjct: 454 VHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQA 513

Query: 555 CSNGGLLEQG--------------EAYFKSMVAN-----------YGI-----EPCIEHY 584
           CS+ G LE+G              ++Y  + + +           +G+     E  I  +
Sbjct: 514 CSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSW 573

Query: 585 TSMVSLLGRAGHLDKAAKLIE---GIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
           + M++  G  G ++    L     G   +P+ + +  +L AC     VE G+L    + +
Sbjct: 574 SVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSE 633

Query: 642 FEPEDEATH-VLLSNIYAMARSWEKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRG 700
           F  E +  H   + ++ + A     A      L +  N  +      G   H  ++II+ 
Sbjct: 634 FGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKS 693

Query: 701 MLE-WLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRII 759
           + +  L++ +   GY   LS +  +  E   +++  V S  +  +  L K+P  S I I 
Sbjct: 694 IEKNLLDVDTADTGYYTLLSNIYAE--EGTWDKFGKVRS--MMKSKGLRKVPGYSTIEID 749

Query: 760 KNL 762
           K +
Sbjct: 750 KKI 752



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 130/264 (49%), Gaps = 5/264 (1%)

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           ++ + + CAT   L    Q+H+ +   GL      S  L++ YA+ G  E+S  +F   P
Sbjct: 4   YMPLFRRCATSTTL---TQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFP 60

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKML-EEQVPATEVTYSSVLRACASLAALEPGM 464
           K +   W  +I  YV  G   +A+ ++ +M+ ++Q   +   + SVL+AC+    L  G 
Sbjct: 61  KPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGG 120

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
           +VH   +K  ++ D VV  +L+ MY +   + DA   FD M   + V+W++++  +  +G
Sbjct: 121 KVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNG 180

Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY 584
            ++E L +F  M      P+++T + V  ACS  G L  G +     V    IE      
Sbjct: 181 QASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRS-VHGYVVRREIESNASLN 239

Query: 585 TSMVSLLGRAGHLDKAAKLIEGIP 608
            S++ + G+ G L  A +L E +P
Sbjct: 240 NSLIVMYGKLGDLYSAERLFENVP 263


>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 748

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 247/664 (37%), Positives = 355/664 (53%), Gaps = 81/664 (12%)

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
           F   L  FS +  +   P+ F     +K+C  L  +   +  H  A  + +  D  VA +
Sbjct: 85  FPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFAAASGFLTDSIVASS 144

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L  +Y K   I +AR++F+ MP +DV+ WS MIA Y++  L  +A ELF  MR   V PN
Sbjct: 145 LTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPN 204

Query: 343 QF-----------------------------------TFVSVLQACATMEGLDLGNQIHS 367
                                                T   VL A   +E + +G Q+H 
Sbjct: 205 LVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHG 264

Query: 368 LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKR-------------------- 407
            V++ GL SD FV +A++D+Y KCG ++    +F E  +                     
Sbjct: 265 YVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDT 324

Query: 408 ---------------NHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLR 452
                          N VTW ++I    Q G+  +A+ +F  M    V    VT  S++ 
Sbjct: 325 ALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIP 384

Query: 453 ACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS 512
           AC +++AL  G ++HC +++     DV V +ALIDMYAKCG I  AR  FD M+  N VS
Sbjct: 385 ACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVS 444

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
           WNA++ GY+MHG + E +++F +M Q G +P+ +TF  VLSAC+  GL E+G   + SM 
Sbjct: 445 WNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMS 504

Query: 573 ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIG 632
             +GIEP +EHY  +V+LL R G L++A  +I+ +PF+P   +W ALL +C +HNN+ +G
Sbjct: 505 EEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHNNLSLG 564

Query: 633 RLSAQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGM 681
            ++A+ +   EP +   ++LLSNIYA    W+           K   K PG SWIE    
Sbjct: 565 EIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVMKSKGLRKNPGYSWIEVGHK 624

Query: 682 VHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKL 741
           VH   AGD SH  M  I   L+ LNM+ +K+GY+P  + VL+DV E +KE+ L  HSEKL
Sbjct: 625 VHMLLAGDQSHPQMKDILEKLDKLNMQMKKSGYLPKTNFVLQDVEEQDKEQILCGHSEKL 684

Query: 742 ALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSC 801
           A+   L    P  P+++IKNLRIC DCH  IK+IS++  REI +RD +RFHHF+DG CSC
Sbjct: 685 AVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEGREIYVRDTNRFHHFKDGVCSC 744

Query: 802 GDFW 805
           GDFW
Sbjct: 745 GDFW 748



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 138/557 (24%), Positives = 234/557 (42%), Gaps = 97/557 (17%)

Query: 62  SLQSCIQND--DLQTAMTIHCQVLKKGNCLDLFATNVLLNVY---VKLNRLPDATKLFDE 116
           +L  C+ +    L  A   H  +L+     D   T  LL+ Y   + L+    +  L   
Sbjct: 4   ALSQCLSSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSH 63

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH------------------------REG 152
           +P     SF + I  +  S  F   +  FS LH                          G
Sbjct: 64  LPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPG 123

Query: 153 HELNPFAF-TAFLKVLVSMGWAELCPCVFAC--------VYKLGHDSNAFVGTALIDAFS 203
            +L+ FA  + FL    S+  + L      C        ++    D +  V +A+I  +S
Sbjct: 124 QQLHAFAAASGFLTD--SIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYS 181

Query: 204 VCGCVEFARKVF---------------DGLF-----NDCFEEALNFFSQMRAVGFKPNNF 243
             G VE A+++F               +G+      N  ++EA+  F  M   GF P+  
Sbjct: 182 RLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGS 241

Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
           T + VL A   L+ + V    HG  +K     D +V  A+LD+Y K G +    R+F+E+
Sbjct: 242 TVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEV 301

Query: 304 PK-----------------------------KD------VIPWSFMIARYAQTDLSIDAV 328
            +                             KD      V+ W+ +IA  +Q    ++A+
Sbjct: 302 EEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEAL 361

Query: 329 ELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVY 388
           ELF  M+   V PN  T  S++ AC  +  L  G +IH   +R G+  DV+V +AL+D+Y
Sbjct: 362 ELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMY 421

Query: 389 AKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYS 448
           AKCGR++ +   F +    N V+WN ++ GY   G+  + M MF  ML+       VT++
Sbjct: 422 AKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFT 481

Query: 449 SVLRACASLAALEPGMQVH-CLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMN 506
            VL ACA     E G + +  ++ +   +  +     L+ + ++ G + +A  ++ +M  
Sbjct: 482 CVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPF 541

Query: 507 DWNEVSWNAMISGYSMH 523
           + +   W A++S   +H
Sbjct: 542 EPDACVWGALLSSCRVH 558



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 167/371 (45%), Gaps = 41/371 (11%)

Query: 249 LKACLGLDT--IRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR---RIFEEM 303
           L  CL   T  +  A+ AH   L+     D  +  +LL  Y  +  +S  +    +   +
Sbjct: 5   LSQCLSSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHL 64

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
           P   +  +S +I  +A++      +  F  +    + P+ F   S +++CA++  LD G 
Sbjct: 65  PHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQ 124

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
           Q+H+     G L+D  V+++L  +Y KC R+ ++ +LF   P R+ V W+ MI GY +LG
Sbjct: 125 QLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLG 184

Query: 424 EVGKAMIMFSKMLEEQVPATEV-----------------------------------TYS 448
            V +A  +F +M    V    V                                   T S
Sbjct: 185 LVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVS 244

Query: 449 SVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDW 508
            VL A   L  +  G QVH   +K     D  V +A++DMY KCG + +   VFD + + 
Sbjct: 245 CVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEM 304

Query: 509 NEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYF 568
              S NA ++G S +G+    L+VF+  + +    N +T+  ++++CS  G   +    F
Sbjct: 305 EIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELF 364

Query: 569 KSMVANYGIEP 579
           + M A YG+EP
Sbjct: 365 RDMQA-YGVEP 374



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 127/523 (24%), Positives = 205/523 (39%), Gaps = 117/523 (22%)

Query: 61  TSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPER 120
           ++++SC     L     +H      G   D    + L ++Y+K +R+ DA KLFD MP+R
Sbjct: 109 SAIKSCASLRALDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDR 168

Query: 121 NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLK--------------- 165
           + + +   I GY+      EA  LF  +   G E N  ++   L                
Sbjct: 169 DVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMF 228

Query: 166 --VLVSMGWAE--LCPCVFAC----------------VYKLGHDSNAFVGTALIDAFSVC 205
             +LV   W +     CV                   V K G  S+ FV +A++D +  C
Sbjct: 229 RMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKC 288

Query: 206 GCVEFARKVFD--------------------GLFNDCFE--------------------- 224
           GCV+   +VFD                    G+ +   E                     
Sbjct: 289 GCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSII 348

Query: 225 ----------EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
                     EAL  F  M+A G +PN  T   ++ AC  +  +   K  H  +L+    
Sbjct: 349 ASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIF 408

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
            D+YV  AL+D+Y K G I  ARR F++M   +++ W+ ++  YA    + + +E+F  M
Sbjct: 409 DDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMM 468

Query: 335 RQAFVAPNQFTFVSVLQACA----TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAK 390
            Q+   P+  TF  VL ACA    T EG    N   S+    G+   +     L+ + ++
Sbjct: 469 LQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYN---SMSEEHGIEPKMEHYACLVTLLSR 525

Query: 391 CGRMENSVELFAESP-KRNHVTWNTMIVG-----YVQLGEVGKAMIMF------------ 432
            G++E +  +  E P + +   W  ++        + LGE+    + F            
Sbjct: 526 VGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILL 585

Query: 433 -----SKML-EEQVPATEVTYSSVLRACASLAALEPGMQVHCL 469
                SK L +E+    EV  S  LR     + +E G +VH L
Sbjct: 586 SNIYASKGLWDEENRIREVMKSKGLRKNPGYSWIEVGHKVHML 628



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 58/122 (47%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N+ +  + + +C     L     IHC  L++G   D++  + L+++Y K  R+  A +
Sbjct: 373 EPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARR 432

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
            FD+M   N +S+   ++GY +  +  E + +F  + + G + +   FT  L      G 
Sbjct: 433 CFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGL 492

Query: 173 AE 174
            E
Sbjct: 493 TE 494


>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
 gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
          Length = 824

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 274/804 (34%), Positives = 426/804 (52%), Gaps = 59/804 (7%)

Query: 51  VSEFNSHSYATSLQSCIQN-------DDLQTAMTIHCQVLKKGNCLD--LFATNV----- 96
           V EF++   A +LQ C +N       DD+ T    +C  L+   CL   L  +N      
Sbjct: 31  VREFSAS--ANALQDCWKNGNESKEIDDVHTLFR-YCTNLQSAKCLHARLVVSNAIQNVC 87

Query: 97  ----LLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFST-LHRE 151
               L+N+Y  L  +  A   FD +  R+  ++   I GY  +    E +  FS  +   
Sbjct: 88  ISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSS 147

Query: 152 GHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFA 211
           G + +   F + LK   ++       C+     K G   + +V  +LI  +   G V  A
Sbjct: 148 GLQPDYRTFPSVLKACRNVTDGNKIHCL---ALKFGFMWDVYVAASLIHLYCRYGAVVNA 204

Query: 212 RKVFD-------GLFNDCF---------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGL 255
           R +FD       G +N            +EAL     +RA+    ++ T   +L AC   
Sbjct: 205 RILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLRAM----DSVTVVSLLSACTEA 260

Query: 256 DTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMI 315
                  + H  ++K   E +L+V+  L+DLY + G + + +++F+ M  +D+I W+ +I
Sbjct: 261 GDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSII 320

Query: 316 ARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG-L 374
             Y   +  + A+ LF  MR + + P+  T +S+    + +  +     +    +R G  
Sbjct: 321 KAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWF 380

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
           L D+ + NA++ +YAK G ++++  +F   P ++ ++WNT+I GY Q G   +A+ M++ 
Sbjct: 381 LEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNI 440

Query: 435 MLEE--QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKC 492
           M EE  ++ A + T+ SVL AC+   AL  GM++H   +K    +DV V  +L DMY KC
Sbjct: 441 MEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKC 500

Query: 493 GSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL 552
           G + DA  +F  +   N V WN +I+ +  HG   + + +F  M   G +P+++TFV +L
Sbjct: 501 GRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLL 560

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
           SACS+ GL+++GE  F+ M  +YGI P ++HY  MV L GRAG L+ A   I+ +P QP 
Sbjct: 561 SACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPD 620

Query: 613 VMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE-------- 664
             IW ALL AC +H NV++G+++++H+ + EPE    HVLLSN+YA A  WE        
Sbjct: 621 ASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSI 680

Query: 665 ---KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAV 721
              K   K PG S +E    V  F  G+ +H     +   L  L+ K +  GY+PD   V
Sbjct: 681 TSGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALHEKLKMVGYVPDHRFV 740

Query: 722 LRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQR 781
           L+DV +DEKE  L  HSE+LA+AFAL   P  + IRI KNLR+C DCH+  K ISKI +R
Sbjct: 741 LQDVEDDEKEHILMSHSERLAMAFALITTPAKTTIRIFKNLRVCGDCHSVTKFISKITER 800

Query: 782 EIIIRDVHRFHHFQDGCCSCGDFW 805
           EII+RD +RFHHF++G CSCGD+W
Sbjct: 801 EIIVRDSNRFHHFKNGVCSCGDYW 824


>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
          Length = 1008

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 258/805 (32%), Positives = 428/805 (53%), Gaps = 54/805 (6%)

Query: 30   AQAALSTQQCSNSTTTPITFSVSEFNSHSYATSL--QSCIQNDDLQTAMTIHCQVLKKGN 87
            A AA         ++      V+ F+  +Y  +L  +S + +  L  A  +  Q+  K  
Sbjct: 229  APAAPGVVPLKQPSSQAAPAGVTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHK-- 286

Query: 88   CLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFST 147
              ++F+ N++L+ Y     LP A  LF   P RN  ++   ++ +  + +  +A+ LF  
Sbjct: 287  --NIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRA 344

Query: 148  LHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGC 207
            +  EG   +    T  L +          P +     K G D++ FV   L+DA+   G 
Sbjct: 345  MLGEGVIPDRVTVTTVLNLPGCT-----VPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGL 399

Query: 208  VEFARKVF-----------DGLFNDCFEE-----ALNFFSQMRAVGFKPNNFTFAFVLKA 251
            +  AR+VF           + +   C +E     AL  F+ MR  G+  +          
Sbjct: 400  LAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSRH---------- 449

Query: 252  CLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPW 311
                  + + + +H  +  T   ++++V  +LLD Y+K   + + RR+F+EMP++D + +
Sbjct: 450  -----PLHLLQYSHSRSRSTSV-LNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSY 503

Query: 312  SFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR 371
            + +IA YA    +   + LF  M++         + ++L    ++  + +G QIH+ +V 
Sbjct: 504  NVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVL 563

Query: 372  VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIM 431
            +GL S+  + NAL+D+Y+KCG ++ +   F+   +++ ++W  +I GYVQ G+  +A+ +
Sbjct: 564  LGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQL 623

Query: 432  FSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAK 491
            FS M    +     T+SS+++A +SLA +  G Q+H   +++ Y   V   + L+DMYAK
Sbjct: 624  FSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAK 683

Query: 492  CGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGV 551
            CG + +A   FD M + N +SWNA+IS Y+ +G +   +K+F+ M   G+ P+++TF+ V
Sbjct: 684  CGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSV 743

Query: 552  LSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQP 611
            L+ACS+ GL ++   YF  M   Y I P  EHY  ++  LGR G   +  K++  +PF+ 
Sbjct: 744  LAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKA 803

Query: 612  SVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA---- 667
              +IW ++L +C IH N E+ R++A  +   EP D   +V+LSNIYA A  WE AA    
Sbjct: 804  DPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKK 863

Query: 668  -------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSA 720
                    KE G SW+E +  ++ F + D +   ++ I+  L+ L  +  K GY PD++ 
Sbjct: 864  IMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITC 923

Query: 721  VLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQ 780
             L  V  + K   L  HSE+LA+AFAL   P  +PIRI+KNL  C+DCH  IK+ISKIV 
Sbjct: 924  ALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVN 983

Query: 781  REIIIRDVHRFHHFQDGCCSCGDFW 805
            R+II+RD  RFHHF+DG CSCGD+W
Sbjct: 984  RDIIVRDSRRFHHFKDGVCSCGDYW 1008


>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
          Length = 514

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 228/509 (44%), Positives = 315/509 (61%), Gaps = 42/509 (8%)

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           V PNQFT  +V++ACA++  L+ G Q H+ ++++G  SDV V  AL+ +YA+CG +E++ 
Sbjct: 6   VKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAG 65

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQV------------------ 440
            +F +  +R+  TWN MI G+ Q  ++ KA+ +F +M E  V                  
Sbjct: 66  HVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDE 125

Query: 441 -------------PATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALID 487
                         +      SVL ACA LAALE G Q H   V++ + +D+VV +AL+D
Sbjct: 126 SLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVD 185

Query: 488 MYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLT 547
           MYAK GS+ DA  VFD M   NEVSWN++I+G + HG   + + +F+ M Q G +PN ++
Sbjct: 186 MYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEIS 245

Query: 548 FVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGI 607
           FVGVLSACS+ GL+ +G  YF  M  NYGI P + HYT M+ LLGRAG LD+A   I G+
Sbjct: 246 FVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGM 305

Query: 608 PFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA 667
           P +P V +W ALLGAC IH N E+ +  A+H+L  E +    +VLLSNIYA A  W+ AA
Sbjct: 306 PVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQWDDAA 365

Query: 668 S-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIP 716
                       K+PG SWIE + ++H F AG+TSH  +  I   LE L+ K + AGY+P
Sbjct: 366 KVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMKAAGYVP 425

Query: 717 DLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIIS 776
           + + VL+DV +DEKE  L  HSEKLA+AF +    P + IR+ KNLR+C DCHT IK IS
Sbjct: 426 NKNFVLQDVEDDEKELSLSHHSEKLAIAFGIINTNPGTTIRVAKNLRVCGDCHTVIKFIS 485

Query: 777 KIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
               R+I++RD +RFHHF+DG CSCGD+W
Sbjct: 486 LNFTRKIVVRDANRFHHFKDGRCSCGDYW 514



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 100/326 (30%), Positives = 169/326 (51%), Gaps = 35/326 (10%)

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           M   G KPN FT + V+KAC  + ++   K AH   +K  +E D+ V  AL+ +Y + G 
Sbjct: 1   MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60

Query: 293 ISNARRIFE-------------------------------EMPKKDVIPWSFMIARYAQT 321
           + +A  +F+                               EM ++DV+ W+ +IA YAQ 
Sbjct: 61  LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120

Query: 322 DLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVS 381
               +++ +F +MR+  +  ++F   SVL ACA +  L+LG Q H+ VV+ G   D+ V 
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVG 180

Query: 382 NALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVP 441
           +AL+D+YAK G ME++ ++F + P+RN V+WN++I G  Q G    A+++F +ML+  + 
Sbjct: 181 SALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIK 240

Query: 442 ATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM--DVVVANALIDMYAKCGSITDAR 499
             E+++  VL AC+    +  G     L  + NY +  DV     +ID+  + G + +A 
Sbjct: 241 PNEISFVGVLSACSHTGLVNEGRGYFNLMTQ-NYGIVPDVSHYTCMIDLLGRAGCLDEAE 299

Query: 500 LVFDMMNDWNEVS-WNAMISGYSMHG 524
              + M    +VS W A++    +HG
Sbjct: 300 NFINGMPVEPDVSVWGALLGACRIHG 325



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 143/315 (45%), Gaps = 49/315 (15%)

Query: 151 EGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEF 210
           +G + N F  +  +K   S+   E        + K+G +S+  V TAL+  ++ CG +E 
Sbjct: 4   KGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLED 63

Query: 211 ARKVFDGLF-----------------------------------------------NDCF 223
           A  VFD +                                                N   
Sbjct: 64  AGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYG 123

Query: 224 EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
           +E+LN F+QMR  G K + F    VL AC  L  + + +  H   +++ + +D+ V  AL
Sbjct: 124 DESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSAL 183

Query: 284 LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
           +D+Y KSG + +A ++F++MP+++ + W+ +I   AQ     DAV LF +M QA + PN+
Sbjct: 184 VDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNE 243

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVR-VGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
            +FV VL AC+    ++ G    +L+ +  G++ DV     ++D+  + G ++ +     
Sbjct: 244 ISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFIN 303

Query: 403 ESPKRNHVT-WNTMI 416
             P    V+ W  ++
Sbjct: 304 GMPVEPDVSVWGALL 318



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 115/223 (51%), Gaps = 33/223 (14%)

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGS 494
           M+ + V   + T S+V++ACAS+A+LE G Q H   +K  ++ DVVV  AL+ MYA+CGS
Sbjct: 1   MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60

Query: 495 ITDARLVFDMMND-----WNE--------------------------VSWNAMISGYSMH 523
           + DA  VFD M++     WN                           VSW A+I+GY+ +
Sbjct: 61  LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120

Query: 524 GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEH 583
           G   E L VF+ M++ G + +      VLSAC++   LE G   F + V   G    I  
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQ-FHAYVVQSGFALDIVV 179

Query: 584 YTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH 626
            +++V +  ++G ++ A ++ + +P Q + + W +++  C  H
Sbjct: 180 GSALVDMYAKSGSMEDACQVFDKMP-QRNEVSWNSIITGCAQH 221



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/312 (22%), Positives = 123/312 (39%), Gaps = 51/312 (16%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  + +T +++C     L+     H  ++K G   D+     L+++Y +   L DA  +F
Sbjct: 9   NQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVF 68

Query: 115 D-------------------------------EMPERNTISFVTTIQGYTVSSQFVEAVG 143
           D                               EM ER+ +S+   I GY  +    E++ 
Sbjct: 69  DKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLN 128

Query: 144 LFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFS 203
           +F+ + + G + + F   + L     +   EL     A V + G   +  VG+AL+D ++
Sbjct: 129 VFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYA 188

Query: 204 VCGCVEFARKVFD-----------GLFNDCFE-----EALNFFSQMRAVGFKPNNFTFAF 247
             G +E A +VFD            +   C +     +A+  F QM   G KPN  +F  
Sbjct: 189 KSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVG 248

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEM--DLYVAVALLDLYTKSGEISNARRIFEEMP- 304
           VL AC     +   +       +  Y +  D+     ++DL  ++G +  A      MP 
Sbjct: 249 VLSACSHTGLVNEGRGYFNLMTQN-YGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPV 307

Query: 305 KKDVIPWSFMIA 316
           + DV  W  ++ 
Sbjct: 308 EPDVSVWGALLG 319


>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g22690-like [Glycine max]
          Length = 836

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 273/834 (32%), Positives = 432/834 (51%), Gaps = 75/834 (8%)

Query: 42  STTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKG--------NCLDLFA 93
           S+T  +  S+ E N  +  +S +  +    L+    +HC ++KKG        N   L A
Sbjct: 8   SSTLLVPASLKEANPITRNSSSKLLVNCKTLKELKQLHCDMMKKGLLCHKPASNLNKLIA 67

Query: 94  TNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGH 153
           ++V +     L+   +A    D+    +   +   I+GY  +    +A+ L+  +   G 
Sbjct: 68  SSVQIGTLESLDYARNAFG-DDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGI 126

Query: 154 ELN----PFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
             +    PF  +A  K+L      +    V   V K+G + + FV  +LI  ++ CG V+
Sbjct: 127 VPDKYTFPFLLSACSKILALSEGVQ----VHGAVLKMGLEGDIFVSNSLIHFYAECGKVD 182

Query: 210 FARKVFDGLFN----------------DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL 253
             RK+FDG+                  D  +EA++ F QM   G +PN  T   V+ AC 
Sbjct: 183 LGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACA 242

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSF 313
            L  + + K       +   E+   +  AL+D+Y K G+I  AR+IF+E   K+++ ++ 
Sbjct: 243 KLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNT 302

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
           +++ Y   + + D + +   M Q    P++ T +S + ACA +  L +G   H+ V+R G
Sbjct: 303 IMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNG 362

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
           L     +SNA++D+Y KCG+ E + ++F   P +  VTWN++I G V+ G++  A  +F 
Sbjct: 363 LEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFD 422

Query: 434 KMLE-------------------------------EQVPATEVTYSSVLRACASLAALEP 462
           +MLE                               + +P   VT   +  AC  L AL+ 
Sbjct: 423 EMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDL 482

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
              V     K +  +D+ +  AL+DM+++CG  + A  VF  M   +  +W A I   +M
Sbjct: 483 AKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAM 542

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
            G +   +++F+ M ++  +P+++ FV +L+ACS+GG ++QG   F SM   +GI P I 
Sbjct: 543 EGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIV 602

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDF 642
           HY  MV LLGRAG L++A  LI+ +P +P+ ++W +LL AC  H NVE+   +A+ +   
Sbjct: 603 HYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQL 662

Query: 643 EPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTS 691
            PE    HVLLSNIYA A  W           EK   K PG S IE QG++H F +GD S
Sbjct: 663 APERVGIHVLLSNIYASAGKWTDVARVRLQMKEKGVQKVPGSSSIEVQGLIHEFTSGDES 722

Query: 692 HADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMP 751
           HA+   I  MLE +N +  +AGY+PD + VL DV E EKE  L  HSEKLA+A+ L    
Sbjct: 723 HAENTHIGLMLEEINCRLSEAGYVPDTTNVLLDVDEQEKEHLLSRHSEKLAMAYGLITTG 782

Query: 752 PSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
              PIR++KNLR+C DCH+  K++SK+  REI +RD +R+H F++G CSC D+W
Sbjct: 783 QGIPIRVVKNLRMCSDCHSFAKLVSKLYNREITVRDNNRYHFFKEGFCSCRDYW 836


>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
          Length = 805

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 265/768 (34%), Positives = 398/768 (51%), Gaps = 71/768 (9%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           SE  + +Y + LQ C           +H  +      +D      L++ Y     L +  
Sbjct: 95  SELETKTYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGR 154

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELN--PFAFTAFLKVLVS 169
           ++FD M ++N   +   +  Y     F E++ LF  +  +G E      AF  F K    
Sbjct: 155 RVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDK---- 210

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNF 229
                LC            D +     ++I  +           V +GL     E  L  
Sbjct: 211 -----LC------------DRDVISWNSMISGY-----------VSNGLT----ERGLGI 238

Query: 230 FSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK 289
           + QM  +G   +  T   VL  C    T+ + K+ H  A+K+ +E  +  +  LLD+Y+K
Sbjct: 239 YKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSK 298

Query: 290 SGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSV 349
            G++  A R+FE+M +++V+ W+ MIA Y +   S  A++L  +M +  V  +     S+
Sbjct: 299 CGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSI 358

Query: 350 LQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNH 409
           L ACA    LD G  +H  +    + S++FV NALMD+YAKCG ME +  +F+    ++ 
Sbjct: 359 LHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDI 418

Query: 410 VTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCL 469
           ++WNTMI      GE+               P +  T + VL ACASL+ALE G ++H  
Sbjct: 419 ISWNTMI------GELK--------------PDSR-TMACVLPACASLSALERGKEIHGY 457

Query: 470 TVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEV 529
            ++  Y  D  VANAL+D+Y KCG +  ARL+FDM+   + VSW  MI+GY MHG   E 
Sbjct: 458 ILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEA 517

Query: 530 LKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVS 589
           +  F+ M+  G  P+ ++F+ +L ACS+ GLLEQG  +F  M  ++ IEP +EHY  MV 
Sbjct: 518 IATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVD 577

Query: 590 LLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEAT 649
           LL R G+L KA + +E +P  P   IW ALL  C  ++++E+    A+ + + EPE+   
Sbjct: 578 LLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENTGY 637

Query: 650 HVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAG-DTSHADMNI 697
           +VLL+NIYA A  WE           +   K PG SWIE +G V+ F +G ++SH     
Sbjct: 638 YVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKN 697

Query: 698 IRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIR 757
           I  +L+ +  K ++ G+ P     L +  E +KE  L  HSEKLA+AF L  +PP   IR
Sbjct: 698 IESLLKKMRRKMKEEGHFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIR 757

Query: 758 IIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           + KNLR+C DCH   K +SK  +REI++RD +RFHHF+DG CSC  FW
Sbjct: 758 VTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 805


>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
          Length = 1083

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 282/865 (32%), Positives = 447/865 (51%), Gaps = 118/865 (13%)

Query: 54   FNSHSYATSL--QSCIQNDDLQTAMTIHCQVLKKGNCLDLFAT----------------N 95
            + S+   T L   +  +N  L++A  +   +LKK    DLF++                N
Sbjct: 224  YGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKK----DLFSSTALITGYAHEGIYTMGN 279

Query: 96   VLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGY----------------------- 132
             L+++Y K   + DA + FDEM E+N IS+ + I GY                       
Sbjct: 280  ALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAHARYVFDEMRHRNE 339

Query: 133  ----TVSSQFV------EAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW-AELCPCVFA 181
                T+ S +V      EAVGLF  +   G E N F   + +      G+ A+    V  
Sbjct: 340  ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHG 399

Query: 182  CVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL--------------FNDCFE--E 225
             V K G   + +VGTAL+  +   G V  A+K+F+ +              ++D     E
Sbjct: 400  FVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGE 459

Query: 226  ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
             LN + +MR  G   N  TFA V  +C  L+   +     G  ++  +E  + VA +L+ 
Sbjct: 460  VLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLIS 519

Query: 286  LYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFT 345
            +++    +  A  +F+ M + D+I W+ MI+ YA   L  +++  F  MR      N  T
Sbjct: 520  MFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTT 579

Query: 346  FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
              S+L  C++++ L  G  IH LVV++GL S+V + N L+ +Y++ GR E++  +F    
Sbjct: 580  LSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMT 639

Query: 406  KRNHVTWNTMIVGYVQLGEVGKAMIMFSKML----------------------------- 436
            +R+ ++WN+M+  YVQ G+    + + +++L                             
Sbjct: 640  ERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKPDRVTWNALIGGHAENEEPNEAVKA 699

Query: 437  -----EEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAK 491
                 E+ +PA  +T  S L A A+LA LE G Q+H L +K  ++ D+ V NA +DMY K
Sbjct: 700  YKLIREKGIPANYITMVS-LAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGK 758

Query: 492  CGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGV 551
            CG + D   +     + + +SWN +IS ++ HG   +  + F  M + G +P+++TFV +
Sbjct: 759  CGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSL 818

Query: 552  LSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQP 611
            LSAC++GGL+++G AY+ SM   +G+ P IEH   ++ LLGR+G L  A   I+ +P  P
Sbjct: 819  LSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPP 878

Query: 612  SVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS--- 668
            + + WR+LL AC IH N+E+ R +A+H+L+ +P D++ +VL SN+ A +  WE   +   
Sbjct: 879  NDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRK 938

Query: 669  --------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSA 720
                    K+P  SW++ +  VH F  G+  H   + I   L  L   +++AGY+PD S 
Sbjct: 939  EMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSF 998

Query: 721  VLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQ 780
             L D+ E++KE  LW HSE+LALAF L   P SS +RI KNLR+C DCH+  K +S IV 
Sbjct: 999  ALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVG 1058

Query: 781  REIIIRDVHRFHHFQDGCCSCGDFW 805
            R+I++RD +RFHHF  G CSCGD+W
Sbjct: 1059 RKIVLRDPYRFHHFSGGKCSCGDYW 1083



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 174/632 (27%), Positives = 290/632 (45%), Gaps = 69/632 (10%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           Y   LQ CI     +    IH  ++  G   DL     L+  YVK+  +  A  +FD MP
Sbjct: 33  YLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMP 92

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
           ER+ +S+   + GY+ + +F +A  LFS +   G + N     A +      G  E    
Sbjct: 93  ERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKAN----HALVDFHSKCGKMEDASY 148

Query: 179 VFACVYKLGHDS-NAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFE-----------EA 226
           +F  + +    S NA +G   +  F+      F   +  GL  DC+              
Sbjct: 149 LFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGG 208

Query: 227 LNFFSQMRAV----GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT----------- 271
           L   +Q+  +    G+   +     ++ A     ++R AK      LK            
Sbjct: 209 LIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITG 268

Query: 272 -CYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQ---------- 320
             +E    +  AL+D+Y KSGEI +A+R F+EM +K+VI W+ +I+ YA+          
Sbjct: 269 YAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAHAR 328

Query: 321 -----------------------TDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATME 357
                                    L  +AV LFC+M    V PN F   S++ AC+   
Sbjct: 329 YVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSG 388

Query: 358 GL-DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMI 416
            + D G Q+H  VV+ G+L DV+V  AL+  Y   G + N+ +LF E P  N V+W +++
Sbjct: 389 YMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLM 448

Query: 417 VGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD 476
           VGY   G  G+ + ++ +M +E V   + T+++V  +C  L     G QV    ++  ++
Sbjct: 449 VGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFE 508

Query: 477 MDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLM 536
             V VAN+LI M++   S+ +A  VFD MN+ + +SWNAMIS Y+ HGL  E L+ F  M
Sbjct: 509 DSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWM 568

Query: 537 QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGH 596
           +      N+ T   +LS CS+   L+ G      +V   G++  +    ++++L   AG 
Sbjct: 569 RHLHNETNSTTLSSLLSVCSSVDNLKWGRG-IHGLVVKLGLDSNVCICNTLLTLYSEAGR 627

Query: 597 LDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
            + A  + + +  +  ++ W +++ AC + + 
Sbjct: 628 SEDAELVFQAMT-ERDLISWNSMM-ACYVQDG 657



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 161/649 (24%), Positives = 281/649 (43%), Gaps = 76/649 (11%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
           ++  + L++  +   L  A  IH  + + G       T +L+N Y K   L  A  L   
Sbjct: 194 YTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKG 253

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREG------------HELNPFAFTAFL 164
           M +++  S    I GY     +     L     + G             E N  ++T+ +
Sbjct: 254 MLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLI 313

Query: 165 KVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFE 224
                 G+  +    +    ++ H + A   T L     V            GL+    E
Sbjct: 314 SGYAKHGYGHMAHARYV-FDEMRHRNEASWSTMLSGYVRV------------GLY----E 356

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKAC-----LGLDTIRVAKSAHGCALKTCYEMDLYV 279
           EA+  F QM  +G +PN F  A ++ AC     +  +  +V    HG  +KT    D+YV
Sbjct: 357 EAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQV----HGFVVKTGILGDVYV 412

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
             AL+  Y   G + NA+++FEEMP  +V+ W+ ++  Y+ +    + + ++ RMRQ  V
Sbjct: 413 GTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGV 472

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
           + NQ TF +V  +C  +E   LG Q+   +++ G    V V+N+L+ +++    +E +  
Sbjct: 473 SGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACY 532

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +F    + + ++WN MI  Y   G   +++  F  M          T SS+L  C+S+  
Sbjct: 533 VFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDN 592

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND-----WN----- 509
           L+ G  +H L VK   D +V + N L+ +Y++ G   DA LVF  M +     WN     
Sbjct: 593 LKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMAC 652

Query: 510 ------------------------EVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNN 545
                                    V+WNA+I G++ +    E +K + L++++G   N 
Sbjct: 653 YVQDGKCLDGLKILAELLQMGKPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANY 712

Query: 546 LTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
           +T V  L+A +N  +LE+G+     +V   G E  +    + + + G+ G +    K++ 
Sbjct: 713 ITMVS-LAATANLAVLEEGQQ-LHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLP 770

Query: 606 GIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPE-DEATHVLL 653
             P   S + W  L+ A   H   +  R +   +L   P+ D  T V L
Sbjct: 771 Q-PINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSL 818



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 115/448 (25%), Positives = 181/448 (40%), Gaps = 95/448 (21%)

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
           +L+ C+     +     H   +   +  DL++   L+  Y K G++  AR +F+ MP++ 
Sbjct: 36  ILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERS 95

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
           V+ W+ M++ Y+Q      A  LF  MR   V  N                         
Sbjct: 96  VVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANH------------------------ 131

Query: 368 LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK 427
                          AL+D ++KCG+ME++  LF    +R+ V+WN MI GY   G    
Sbjct: 132 ---------------ALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADD 176

Query: 428 AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY-DMDVV------ 480
           +  MF  ML   +     T  SVLRA A    L    Q+H +  +  Y   D+V      
Sbjct: 177 SFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLIN 236

Query: 481 ----------------------------------------VANALIDMYAKCGSITDARL 500
                                                   + NALIDMYAK G I DA+ 
Sbjct: 237 AYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKR 296

Query: 501 VFDMMNDWNEVSWNAMISGYSMHGLS--AEVLKVFDLMQQRGWRPNNLTFVGVLSACSNG 558
            FD M + N +SW ++ISGY+ HG    A    VFD M+ R    N  ++  +LS     
Sbjct: 297 AFDEMEEKNVISWTSLISGYAKHGYGHMAHARYVFDEMRHR----NEASWSTMLSGYVRV 352

Query: 559 GLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRA 618
           GL E+    F  M    G+EP      S+++   R+G++      + G   +  ++    
Sbjct: 353 GLYEEAVGLFCQMWG-LGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGIL-GDV 410

Query: 619 LLGACIIHNNVEIGRL-SAQHILDFEPE 645
            +G  ++H    IG + +AQ + +  P+
Sbjct: 411 YVGTALVHFYGSIGLVYNAQKLFEEMPD 438



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 108/261 (41%), Gaps = 24/261 (9%)

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV 480
            LG + +A+ + S       P+    Y  +L+ C    A + G  +H   +   +  D+ 
Sbjct: 10  NLGRLAEALKLLSSNPTRLDPSL---YLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLH 66

Query: 481 VANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG 540
           +   LI  Y K G +  AR VFD M + + VSW AM+SGYS +G   +   +F  M+  G
Sbjct: 67  LNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCG 126

Query: 541 WRPNNLTFVGVLSACSN--------GGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
            + N+   V   S C          G ++E+    + +M+  Y ++   +    M   + 
Sbjct: 127 VKANH-ALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSML 185

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVL 652
           R G       L+       SV+   A  G  II N +  G ++    L +   D  T +L
Sbjct: 186 RGG-------LVPDCYTLGSVLRASAEGGGLIIANQIH-GIITQ---LGYGSYDIVTGLL 234

Query: 653 LSNIYAMARSWEKAASKEPGL 673
           + N YA   S   A     G+
Sbjct: 235 I-NAYAKNGSLRSAKDLRKGM 254


>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1092

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 259/769 (33%), Positives = 417/769 (54%), Gaps = 41/769 (5%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
             SC+   ++     +H  +L  G   ++  +  L+N+YV    +  +   FD + ++N 
Sbjct: 29  FNSCV---NVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNI 85

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHR--EGHELNP--FAFTAFLKVLVSMGWAELCPC 178
            S+ + I  Y    ++ EA+   + L     G  L P  + F   LK  VS+   +   C
Sbjct: 86  FSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVDGKKVHC 145

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDC 222
              CV+K+G + + FV  +L+  +S  G ++ A KVF  +                 N  
Sbjct: 146 ---CVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGN 202

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
              AL   ++M+  G K +  T A +L  C   D +      H   LK   + D++V+ A
Sbjct: 203 AAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNA 262

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+++Y+K G + +A+ +F++M  +D++ W+ +IA Y Q +    A+  F  M+   + P+
Sbjct: 263 LINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPD 322

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLL-SDVFVSNALMDVYAKCGRMENSVELF 401
             T VS+    + +    +   I   V+R   L  DV + NAL+++YAK G M  +  +F
Sbjct: 323 LLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVF 382

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE--EQVPATEVTYSSVLRACASLAA 459
            + P+++ ++WNT++ GY Q G   +A+  ++ M E  + +P  + T+ S++ A + + A
Sbjct: 383 DQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIP-NQGTWVSIIPAYSHVGA 441

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
           L+ GM++H   +K +  +DV VA  LID+Y KCG + DA  +F  +     V WNA+I+ 
Sbjct: 442 LQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIAS 501

Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
             +HG   E L++F  M     + +++TFV +LSACS+ GL+++G+  F  M   YGI+P
Sbjct: 502 LGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKP 561

Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHI 639
            ++HY  MV LLGRAG+L+KA +L+  +P QP   IW ALL AC I+ N E+G L++  +
Sbjct: 562 SLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRL 621

Query: 640 LDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAG 688
           L+ + E+   +VLLSNIYA    WE           +   K PG S +        F  G
Sbjct: 622 LEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTG 681

Query: 689 DTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALF 748
           + +H     I   L+ L+ K +  GY+PD S V +D+ EDEKE+ L  HSE+LA+AF + 
Sbjct: 682 NQTHPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGII 741

Query: 749 KMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDG 797
             PP SPIRI KNLR+C DCH A K IS+I +REI++RD +RFHHF+DG
Sbjct: 742 STPPRSPIRIFKNLRVCGDCHNATKYISRISEREIVVRDSNRFHHFKDG 790



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 97/404 (24%), Positives = 182/404 (45%), Gaps = 25/404 (6%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           + ++ + A+ L  C Q+DD+   + IH  VLK G   D+F +N L+N+Y K  RL DA  
Sbjct: 219 KMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQM 278

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +FD+M  R+ +S+ + I  Y  ++    A+  F  +   G   +     +   +   +  
Sbjct: 279 VFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSD 338

Query: 173 AELCPCVFACVYKLG-HDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------------ 219
             +   +   V +    D +  +G AL++ ++  G +  A  VFD L             
Sbjct: 339 QRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVT 398

Query: 220 ----NDCFEEALNFFSQMRAV-GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
               N    EA++ ++ M       PN  T+  ++ A   +  ++     H   +K    
Sbjct: 399 GYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLY 458

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
           +D++VA  L+DLY K G + +A  +F E+P+   +PW+ +IA         +A++LF  M
Sbjct: 459 LDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDM 518

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR-VGLLSDVFVSNALMDVYAKCGR 393
               V  +  TFVS+L AC+    +D G +   ++ +  G+   +     ++D+  + G 
Sbjct: 519 LAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGY 578

Query: 394 MENSVELFAESP-KRNHVTWNTM-----IVGYVQLGEVGKAMIM 431
           +E + EL    P + +   W  +     I G  +LG +    ++
Sbjct: 579 LEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLL 622


>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
          Length = 667

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 254/721 (35%), Positives = 381/721 (52%), Gaps = 67/721 (9%)

Query: 97  LLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELN 156
           L++ Y     L +  ++FD M ++N   +   +  Y     F E++ LF  +  +G E  
Sbjct: 2   LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 61

Query: 157 PFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD 216
                + L       + +LC            D +     ++I  +           V +
Sbjct: 62  RSESASEL-------FDKLC------------DRDVISWNSMISGY-----------VSN 91

Query: 217 GLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
           GL     E  L  + QM  +G   +  T   VL  C    T+ + K+ H  A+K+ +E  
Sbjct: 92  GLT----ERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERR 147

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           +  +  LLD+Y+K G++  A R+FE+M +++V+ W+ MIA Y +   S  A+ L  +M +
Sbjct: 148 INFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEK 207

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             V  +     S+L ACA    LD G  +H  +    + S++FV NALMD+YAKCG ME 
Sbjct: 208 EGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEG 267

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           +  +F+    ++ ++WNTM+                      ++     T + +L ACAS
Sbjct: 268 ANSVFSTMVVKDIISWNTMV---------------------GELKPDSRTMACILPACAS 306

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           L+ALE G ++H   ++  Y  D  VANAL+D+Y KCG +  ARL+FDM+   + VSW  M
Sbjct: 307 LSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVM 366

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           I+GY MHG   E +  F+ M+  G  P+ ++F+ +L ACS+ GLLEQG  +F  M  ++ 
Sbjct: 367 IAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFN 426

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
           IEP +EHY  MV LL R G+L KA K IE +P  P   IW ALL  C I++++E+    A
Sbjct: 427 IEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVA 486

Query: 637 QHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYF 685
           + + + EPE+   +VLL+NIYA A  WE           K   K PG SWIE +G V+ F
Sbjct: 487 ERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLF 546

Query: 686 RAG-DTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALA 744
            +G ++SH     I  +L+ +  K ++ GY P     L +  E +KE  L  HSEKLA+A
Sbjct: 547 VSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMA 606

Query: 745 FALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
           F L  +PP   IR+ KNLR+C DCH   K +SK  +REI++RD +RFHHF+DG CSC  F
Sbjct: 607 FGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGF 666

Query: 805 W 805
           W
Sbjct: 667 W 667



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 148/301 (49%), Gaps = 7/301 (2%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L  C ++  L     +H   +K      +  +N LL++Y K   L  A ++F++M ERN 
Sbjct: 120 LVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNV 179

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +S+ + I GYT       A+ L   + +EG +L+  A T+ L      G  +    V   
Sbjct: 180 VSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDY 239

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVG-FKPN 241
           +      SN FV  AL+D ++ CG +E A  VF  +         +  S    VG  KP+
Sbjct: 240 IKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMV------VKDIISWNTMVGELKPD 293

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
           + T A +L AC  L  +   K  HG  L+  Y  D +VA AL+DLY K G +  AR +F+
Sbjct: 294 SRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFD 353

Query: 302 EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL 361
            +P KD++ W+ MIA Y       +A+  F  MR A + P++ +F+S+L AC+    L+ 
Sbjct: 354 MIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQ 413

Query: 362 G 362
           G
Sbjct: 414 G 414



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/443 (23%), Positives = 203/443 (45%), Gaps = 41/443 (9%)

Query: 96  VLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHEL 155
           +++   ++  R   A++LFD++ +R+ IS+ + I GY  +      +G++  +   G ++
Sbjct: 52  IMVEKGIEGKRSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDV 111

Query: 156 NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF 215
           +     + L      G   L   V +   K   +        L+D +S CG ++ A +VF
Sbjct: 112 DLATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVF 171

Query: 216 D---------------GLFNDCFEE-ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIR 259
           +               G   D + + A+    QM   G K +      +L AC    ++ 
Sbjct: 172 EKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLD 231

Query: 260 VAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYA 319
             K  H          +L+V  AL+D+Y K G +  A  +F  M  KD+I W+ M+    
Sbjct: 232 NGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGE-- 289

Query: 320 QTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVF 379
                              + P+  T   +L ACA++  L+ G +IH  ++R G  SD  
Sbjct: 290 -------------------LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRH 330

Query: 380 VSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ 439
           V+NAL+D+Y KCG +  +  LF   P ++ V+W  MI GY   G   +A+  F++M +  
Sbjct: 331 VANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAG 390

Query: 440 VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITD 497
           +   EV++ S+L AC+    LE G +   + +K +++++  + +   ++D+ ++ G+++ 
Sbjct: 391 IEPDEVSFISILYACSHSGLLEQGWRFFYI-MKNDFNIEPKLEHYACMVDLLSRTGNLSK 449

Query: 498 ARLVFDMMNDWNEVS-WNAMISG 519
           A    + +    + + W A++ G
Sbjct: 450 AYKFIETLPIAPDATIWGALLCG 472



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 33/198 (16%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +S + A  L +C     L+    IH  +L+ G   D    N L+++YVK   L  A  LF
Sbjct: 293 DSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLF 352

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV-----LVS 169
           D +P ++ +S+   I GY +     EA+  F+ +   G E +  +F + L       L+ 
Sbjct: 353 DMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLE 412

Query: 170 MGWA---------------ELCPCVFACVYKLGHDSNA--FVGT------ALIDAFSVCG 206
            GW                E   C+   + + G+ S A  F+ T      A I    +CG
Sbjct: 413 QGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCG 472

Query: 207 C-----VEFARKVFDGLF 219
           C     +E A KV + +F
Sbjct: 473 CRIYHDIELAEKVAERVF 490


>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Brachypodium distachyon]
          Length = 747

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 250/657 (38%), Positives = 378/657 (57%), Gaps = 32/657 (4%)

Query: 181 ACVYKLGH-DSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCF 223
           AC  +LG    + F   +L+ A+   G +  A KVFD +                 N   
Sbjct: 91  ACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARA 150

Query: 224 EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
            EA+  F +M   G   +  T + VL  C+ L    +A   H  A+K   + +L+V  AL
Sbjct: 151 AEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNAL 210

Query: 284 LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
           +D+Y K G +  A+ +F  M  +D++ W+ +I+   Q   +  A+++F  MR + V+P+ 
Sbjct: 211 IDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDV 270

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVRVGL-LSDVFVSNALMDVYAKCGRMENSVELFA 402
            T VS+  A A          +H  V+R G  + D+   NA++D+YAK   +E +  +F 
Sbjct: 271 LTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFD 330

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE-EQVPATEVTYSSVLRACASLAALE 461
             P ++ V+WNT+I GY+Q G   +A+  +  M + E + A + T+ SVL A + L AL+
Sbjct: 331 SMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQ 390

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
            GM++H L++K   ++DV V   LID+YAKCG + +A L+F+ M   +   WNA+ISG  
Sbjct: 391 QGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLG 450

Query: 522 MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
           +HG  AE L +F  MQQ G +P+++TFV +L+ACS+ GL++QG ++F  M   Y I P  
Sbjct: 451 VHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIA 510

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
           +HY  M  +LGRAG LD+A   I+ +P +P   +W ALLGAC IH NVE+G++++Q++ +
Sbjct: 511 KHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFE 570

Query: 642 FEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDT 690
            +PE+   +VL+SN+YA    W+           +   K PG S IE +  V+ F +G+ 
Sbjct: 571 LDPENVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQ 630

Query: 691 S--HADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALF 748
           +  H     I+  L  L  K R  GY+ D S VL+DV +DEKE  L  HSE+LA+AF + 
Sbjct: 631 TEPHPQHEEIQAELRSLLAKIRSVGYVSDYSFVLQDVEDDEKEHILNNHSERLAIAFGII 690

Query: 749 KMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
             P  +P+ I KNLR+C DCH A K IS+I +REII+RD +RFHHF+DG CSCGDFW
Sbjct: 691 NTPSRTPLHIYKNLRVCGDCHNATKYISQITEREIIVRDSNRFHHFKDGHCSCGDFW 747



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 137/473 (28%), Positives = 238/473 (50%), Gaps = 23/473 (4%)

Query: 74  TAMTIHCQVLKKGNCL-DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGY 132
           +A  +H   L+ G     +F +  L++ Y++  R+ +A K+FDEM ER+  ++   + G 
Sbjct: 85  SAAQLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGL 144

Query: 133 TVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNA 192
             +++  EAVGLF  +  EG   +    ++ L + V +G   L   +     K G D   
Sbjct: 145 CRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKEL 204

Query: 193 FVGTALIDAFSVCGCVEFARKVFDGL-----------FNDCFEE-----ALNFFSQMRAV 236
           FV  ALID +   G +E A+ VF G+            + C +      AL  F  MR  
Sbjct: 205 FVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGS 264

Query: 237 GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV-ALLDLYTKSGEISN 295
           G  P+  T   +  A       R AKS H   ++  +++D  +A  A++D+Y K   I  
Sbjct: 265 GVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEA 324

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQACA 354
           A+R+F+ MP +D + W+ +I  Y Q  L+ +AVE +  M +   +   Q TFVSVL A +
Sbjct: 325 AQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYS 384

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
            +  L  G ++H+L +++GL  DV+V   L+D+YAKCG++  ++ LF + P+R+   WN 
Sbjct: 385 HLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNA 444

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
           +I G    G   +A+ +FS+M +E +    VT+ S+L AC+    ++ G     + ++  
Sbjct: 445 IISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDV-MQVT 503

Query: 475 YDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHG 524
           YD+  +  +   + DM  + G + +A   + +M    +   W A++    +HG
Sbjct: 504 YDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHG 556



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 127/397 (31%), Positives = 206/397 (51%), Gaps = 8/397 (2%)

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALK-TCYEMDLYVAVALLDLYTKSGEI 293
           A  F+P+ FTF  +++A     +   A   H CAL+       ++ + +L+  Y + G I
Sbjct: 63  AYPFRPDGFTFPSLIRAA---PSNASAAQLHACALRLGLVRPSVFTSGSLVHAYLRFGRI 119

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
           S A ++F+EM ++DV  W+ M++   +   + +AV LF RM    VA +  T  SVL  C
Sbjct: 120 SEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMC 179

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
             +    L   +H   V+ GL  ++FV NAL+DVY K G +E +  +F     R+ VTWN
Sbjct: 180 VLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWN 239

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
           ++I G  Q G+   A+ MF  M    V    +T  S+  A A          +HC  ++ 
Sbjct: 240 SIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRR 299

Query: 474 NYDMDVVVA-NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
            +D+D ++A NA++DMYAK  +I  A+ +FD M   + VSWN +I+GY  +GL+ E ++ 
Sbjct: 300 GWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVER 359

Query: 533 FDLMQQ-RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLL 591
           +  MQ+  G +    TFV VL A S+ G L+QG     ++    G+   +   T ++ L 
Sbjct: 360 YGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQG-MRMHALSIKIGLNVDVYVGTCLIDLY 418

Query: 592 GRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
            + G L +A  L E +P + S   W A++    +H +
Sbjct: 419 AKCGKLAEAMLLFEKMP-RRSTGPWNAIISGLGVHGH 454



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/393 (24%), Positives = 175/393 (44%), Gaps = 25/393 (6%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           + ++ L  C+   D   A+ +H   +K G   +LF  N L++VY KL  L +A  +F  M
Sbjct: 171 TVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGM 230

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
             R+ +++ + I G     Q   A+ +F  +   G   +     +    +   G      
Sbjct: 231 ECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAK 290

Query: 178 CVFACVYKLGHDSNAFV-GTALIDAFSVCGCVEFARKVFDG----------------LFN 220
            +   V + G D +  + G A++D ++    +E A+++FD                 + N
Sbjct: 291 SLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQN 350

Query: 221 DCFEEALNFFSQM-RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
               EA+  +  M +  G K    TF  VL A   L  ++     H  ++K    +D+YV
Sbjct: 351 GLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYV 410

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
              L+DLY K G+++ A  +FE+MP++   PW+ +I+         +A+ LF RM+Q  +
Sbjct: 411 GTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGI 470

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALM-DVYAKCGRMENSV 398
            P+  TFVS+L AC+    +D G     ++     +  +    A M D+  + G+++ + 
Sbjct: 471 KPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAF 530

Query: 399 ELFAESP-KRNHVTWNTM-----IVGYVQLGEV 425
                 P K +   W  +     I G V++G+V
Sbjct: 531 NFIQNMPIKPDSAVWGALLGACRIHGNVEMGKV 563


>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
          Length = 886

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 276/794 (34%), Positives = 405/794 (51%), Gaps = 89/794 (11%)

Query: 101 YVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAF 160
           Y+      DA  + + +     + +   ++ +        A+G+   + R G + + F  
Sbjct: 93  YLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTKPDHFTL 152

Query: 161 TAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN 220
              LK    +        +   +   G +SN FV  AL+  +S CG +E A  VFD +  
Sbjct: 153 PYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITR 212

Query: 221 DCFEE-------------------ALNFFSQM------RAVGFKPNNFTFAFVLKACLGL 255
              ++                   AL  FS+M      +A   + +  +   +L AC  L
Sbjct: 213 KGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASL 272

Query: 256 DTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMI 315
             +   K  H  A++     D +V  AL+D Y K G +++A ++F  M  KDV+ W+ M+
Sbjct: 273 KALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMV 332

Query: 316 ARYAQTDLSIDAVELFCRMRQ-----------AFVA------------------------ 340
             Y Q+     A ELF  MR+           A +A                        
Sbjct: 333 TGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSE 392

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLS------------DVFVSNALMDVY 388
           PN  T +S+L ACA++  L  G +IH+  ++  LLS            D+ V NAL+D+Y
Sbjct: 393 PNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMY 452

Query: 389 AKCGRMENSVELFAESPKR--NHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ--VPATE 444
           +KC   + +  +F   P+R  N VTW  MI GY Q G+   A+ +FS+M+ +   V    
Sbjct: 453 SKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNA 512

Query: 445 VTYSSVLRACASLAALEPGMQVHC-LTVKANYDMDV-VVANALIDMYAKCGSITDARLVF 502
            T S +L ACA LAAL  G Q+H  +T    Y+  V  VAN LIDMY+KCG +  AR VF
Sbjct: 513 YTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVF 572

Query: 503 DMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLE 562
           D M   NEVSW +M+SGY MHG   E L +FD MQ+ G+ P++++F+ +L ACS+ G+++
Sbjct: 573 DSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVD 632

Query: 563 QGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           QG  YF  M  +Y +    EHY  ++ LL R G LDKA K I+ +P +PS +IW ALL A
Sbjct: 633 QGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSA 692

Query: 623 CIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEP 671
           C +H+NVE+   +   +++ + E++ ++ L+SNIYA AR W+  A            K P
Sbjct: 693 CRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLMKKSGIKKRP 752

Query: 672 GLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKE 731
           G SW++ +     F  GD SH     I  +LE L  + +  GY+P+ +  L DV ++EK 
Sbjct: 753 GCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALHDVDDEEKN 812

Query: 732 RYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRF 791
             L  HSEKLALA+ L    P  PIRI KNLR+C DCH+A   ISKIV  EII+RD  RF
Sbjct: 813 NLLSEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIIVRDSSRF 872

Query: 792 HHFQDGCCSCGDFW 805
           HHF++G CSCG +W
Sbjct: 873 HHFKNGSCSCGGYW 886



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 138/485 (28%), Positives = 226/485 (46%), Gaps = 78/485 (16%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L +C     L     IH   ++ G   D F  N L++ Y K   + DA K+F+ M  ++ 
Sbjct: 266 LPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDV 325

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +S+   + GYT S  F  A  LF  + +E   L+   ++A +      G+A+        
Sbjct: 326 VSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIA-----GYAQ-------- 372

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNN 242
                                                  C +EAL+ F QM   G +PN+
Sbjct: 373 -------------------------------------RGCSQEALDAFQQMILDGSEPNS 395

Query: 243 FTFAFVLKACLGLDTIRVAKSAHGCALKTC------------YEMDLYVAVALLDLYTKS 290
            T   +L AC  L  +      H  +LK C               DL V  AL+D+Y+K 
Sbjct: 396 VTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKC 455

Query: 291 GEISNARRIFEEMPKKD--VIPWSFMIARYAQTDLSIDAVELFCRM--RQAFVAPNQFTF 346
                AR IF+ +P+++  V+ W+ MI  YAQ   S DA+++F  M  +   VAPN +T 
Sbjct: 456 RSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTI 515

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLL--SDVFVSNALMDVYAKCGRMENSVELFAES 404
             +L ACA +  L +G QIH+ V R      S  FV+N L+D+Y+KCG ++ +  +F   
Sbjct: 516 SCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSM 575

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
           PKRN V+W +M+ GY   G   +A+ +F KM +      ++++  +L AC+    ++ G+
Sbjct: 576 PKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGL 635

Query: 465 QVHCLTVKANYDMDVVVANA-----LIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMIS 518
               + ++ +YD   VVA+A     +ID+ A+CG +  A + + +M  + + V W A++S
Sbjct: 636 NYFDI-MRRDYD---VVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLS 691

Query: 519 GYSMH 523
              +H
Sbjct: 692 ACRVH 696


>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
           mitochondrial [Vitis vinifera]
 gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 238/598 (39%), Positives = 341/598 (57%), Gaps = 12/598 (2%)

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           N CF + L  F +M   G   ++F   F +KAC GL   + AK  H  A+K   E D YV
Sbjct: 91  NKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYV 150

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
           A AL+++YT+ G +  A ++FEE+P K+ + W  MI  +          ELF RMR++  
Sbjct: 151 APALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGF 210

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLL-SDVFVSNALMDVYAKCGRMENSV 398
             + F    ++QAC  +     G   H L ++   + S+ F+  +L+D+Y KCG ++ ++
Sbjct: 211 ELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFAL 270

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
           +LF E   R+ V W+ +I G+ + G   +++ MF +ML + V    VT++S++ AC+SL 
Sbjct: 271 KLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLG 330

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           +L+ G  VH   ++   ++DV    + IDMYAKCG I  A  VF  + + N  SW+ MI+
Sbjct: 331 SLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMIN 390

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           G+ MHGL AE L +F  M+     PN++TFV VLSACS+ G +E+G ++FKSM  +YGI 
Sbjct: 391 GFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGIT 450

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P  EHY  MV LLGRAG +D+A   I  +P +P    W ALLGAC IH   E+    A+ 
Sbjct: 451 PVEEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKK 510

Query: 639 ILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRA 687
           +L  E +    +V+LSNIYA    W           EK   K  G + IE +  ++ F +
Sbjct: 511 LLPLESDQSGVYVMLSNIYADVGMWEMVKKTRLKMCEKGIHKIVGFTSIEIEEKLYLFSS 570

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFAL 747
            D        I  +   L  + R+ GY+PDL  VL DV ++ K+  L  HSEKLA+ F L
Sbjct: 571 EDRFAYKNTQIESLWNSLKERMRELGYVPDLRFVLHDVDDEVKQEVLCGHSEKLAIVFGL 630

Query: 748 FKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
                  PIRI KN+R+C DCHTA K IS I +R+II+RDV RFHH QDG CSCGD+W
Sbjct: 631 LNSGEGMPIRITKNMRVCGDCHTASKFISLITRRKIIMRDVKRFHHVQDGVCSCGDYW 688



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/483 (25%), Positives = 239/483 (49%), Gaps = 24/483 (4%)

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
           L +   ++ Q+L       L    ++   Y++L  L  A+K F+ +   N  S+ T +  
Sbjct: 28  LASNHQLNAQILVNALHRSLLFGPMIFGAYIQLGSLHVASKAFNHITFENLHSWNTILAS 87

Query: 132 YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSN 191
           ++ +  F + + LF  + +EG  ++ F     +K    +   +      +   KL  + +
Sbjct: 88  HSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGD 147

Query: 192 AFVGTALIDAFSVCGCVEFARKVFDG-------LFNDCFEEALNF---------FSQMRA 235
            +V  AL++ ++  G +E A KVF+        ++    +  LNF         FS+MR 
Sbjct: 148 PYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRR 207

Query: 236 VGFKPNNFTFAFVLKACLGLDTIRVAKSAHG-CALKTCYEMDLYVAVALLDLYTKSGEIS 294
            GF+ + F    +++AC  +   +  K+ HG C  K   + + ++  +L+D+Y K G + 
Sbjct: 208 SGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLD 267

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
            A ++FEE+  +DV+ WS +IA +A+   +++++ +F +M    V PN  TF S++ AC+
Sbjct: 268 FALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACS 327

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
           ++  L  G  +H  ++R G+  DV    + +D+YAKCG +  +  +F + P++N  +W+T
Sbjct: 328 SLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWST 387

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
           MI G+   G   +A+ +F +M         VT+ SVL AC+    +E G   H  ++  +
Sbjct: 388 MINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWS-HFKSMSRD 446

Query: 475 YDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH---GLSAE 528
           Y +  V  +   ++D+  + G I +A   + +M  +    +W A++    +H    L+ E
Sbjct: 447 YGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALLGACRIHRRAELAEE 506

Query: 529 VLK 531
           V K
Sbjct: 507 VAK 509



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 179/341 (52%), Gaps = 3/341 (0%)

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y + G +  A + F  +  +++  W+ ++A +++     D ++LF RM +     + F  
Sbjct: 57  YIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNL 116

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
           V  ++AC  +         HSL +++ L  D +V+ ALM+VY + G +E + ++F E P 
Sbjct: 117 VFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPL 176

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
           +N V W  MI G++   E      +FS+M              +++AC ++ A + G   
Sbjct: 177 KNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTF 236

Query: 467 HCLTVKANY-DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGL 525
           H L +K N+ D +  +  +L+DMY KCG +  A  +F+ ++  + V W+A+I+G++ +G 
Sbjct: 237 HGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGR 296

Query: 526 SAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYT 585
           + E + +F  M      PN++TF  ++ ACS+ G L+QG +    M+ N G+E  +++YT
Sbjct: 297 ALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRN-GVELDVKNYT 355

Query: 586 SMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH 626
           S + +  + G +  A ++   IP + +V  W  ++    +H
Sbjct: 356 SFIDMYAKCGCIVTAYRVFCQIP-EKNVFSWSTMINGFGMH 395



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 183/378 (48%), Gaps = 36/378 (9%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +S +   ++++C      Q A   H   +K     D +    L+NVY +L  L +A K+F
Sbjct: 112 DSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVF 171

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           +E+P +N++ +   I+G+   S+      LFS + R G EL+PF         V  G  +
Sbjct: 172 EEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPF---------VVEGLIQ 222

Query: 175 LCPCVFA----------CVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-FNDCF 223
            C  V+A          C+ K   DSN F+ T+L+D +  CG ++FA K+F+ + + D  
Sbjct: 223 ACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVV 282

Query: 224 E---------------EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCA 268
                           E+++ F QM A    PN+ TFA ++ AC  L +++  +S HG  
Sbjct: 283 VWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYM 342

Query: 269 LKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAV 328
           ++   E+D+    + +D+Y K G I  A R+F ++P+K+V  WS MI  +    L  +A+
Sbjct: 343 IRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEAL 402

Query: 329 ELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDV 387
            LF  MR     PN  TFVSVL AC+    ++ G +   S+    G+         ++D+
Sbjct: 403 NLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDL 462

Query: 388 YAKCGRMENSVELFAESP 405
             + G+++ ++      P
Sbjct: 463 LGRAGKIDEALSFINNMP 480


>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 231/610 (37%), Positives = 345/610 (56%), Gaps = 44/610 (7%)

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           P+ FTF F++KA   L+ +   K+ HG  +K     D+++  +L+  Y K GE+    R+
Sbjct: 134 PDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRV 193

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL 359
           F  +P++DV+ W+ MI  + Q     +A+ELF  M    V PN  T V VL ACA     
Sbjct: 194 FVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDF 253

Query: 360 DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGY 419
           + G  +HS + R  +   + +SNA++D+Y KCG +E++  LF + P+++ V+W TM+VGY
Sbjct: 254 EFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGY 313

Query: 420 VQLGEVGKAMIMFSKMLEEQVPA--------------------------------TEVTY 447
            ++GE   A  +F  M  + + A                                 EVT 
Sbjct: 314 AKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTL 373

Query: 448 SSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND 507
            S L ACA L A++ G  +H    K    ++  +  +LIDMY KCG +  A +VF  +  
Sbjct: 374 VSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVER 433

Query: 508 WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAY 567
            +   W+AMI+G +MHG   + + +F  MQ+   +PN +TF  +L ACS+ GL+E+G  +
Sbjct: 434 KDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTF 493

Query: 568 FKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
           F  M   YG+ P ++HY  MV +LGRAG L++A +LIE +P  P+  +W ALLGAC IH 
Sbjct: 494 FNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHE 553

Query: 628 NVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWI 676
           NV +   +   +++ EP +   +VLLSNIYA A  W++ +            KEPG S I
Sbjct: 554 NVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSI 613

Query: 677 ENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDV-REDEKERYLW 735
           E  G+VH F  GD SH     I   L+ +  +    GY+P+ S +L+ V  ED KE+ L+
Sbjct: 614 EVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALF 673

Query: 736 VHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQ 795
           +HSEKLA+AF L     S PIRI+KNLR+C DCH+  K++SK+  REI++RD +RFHHF+
Sbjct: 674 LHSEKLAIAFGLISTGQSQPIRIVKNLRVCGDCHSVAKLVSKLYDREILLRDRYRFHHFR 733

Query: 796 DGCCSCGDFW 805
           +G CSC D+W
Sbjct: 734 EGHCSCMDYW 743



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 126/481 (26%), Positives = 220/481 (45%), Gaps = 61/481 (12%)

Query: 40  SNSTTTPITFSVS-----EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFAT 94
           S+S  TP   S++      F +H   + +  C +   L+    IH Q+L+ G   D F+ 
Sbjct: 14  SHSLPTPNPNSITLNNDRYFANHPTLSLIDQCSETKQLKQ---IHAQMLRTGLFFDPFSA 70

Query: 95  NVLLNVYVKLNRLPD---ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLF-STLHR 150
           + L+     L+  P    A ++FD++P  N  ++ T I+ Y  SS   +++ +F   LH+
Sbjct: 71  SRLITA-AALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQ 129

Query: 151 EGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEF 210
                + F F   +K    +            V K+   S+ F+  +LI  ++ CG +  
Sbjct: 130 SPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGL 189

Query: 211 ARKVFDGLF----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLG 254
             +VF  +                   C EEAL  F +M     KPN  T   VL AC  
Sbjct: 190 GYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAK 249

Query: 255 LDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFM 314
                  +  H    +      L ++ A+LD+YTK G + +A+R+F++MP+KD++ W+ M
Sbjct: 250 KSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTM 309

Query: 315 IARYA-------------------------------QTDLSIDAVELFCRMRQAFVA-PN 342
           +  YA                               Q     +A+ELF  ++ +  A P+
Sbjct: 310 LVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPD 369

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           + T VS L ACA +  +DLG  IH  + + G+  +  ++ +L+D+Y KCG ++ ++ +F 
Sbjct: 370 EVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFH 429

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
              +++   W+ MI G    G    A+ +FSKM E++V    VT++++L AC+ +  +E 
Sbjct: 430 SVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEE 489

Query: 463 G 463
           G
Sbjct: 490 G 490


>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
           bursa-pastoris]
          Length = 706

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 246/620 (39%), Positives = 358/620 (57%), Gaps = 44/620 (7%)

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           AL  +  M ++G  PN++TF F+LKAC      R  +  HG  LK   ++DLYV  +L+ 
Sbjct: 87  ALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIA 146

Query: 286 LYTKSGEISNARRIFE-------------------------------EMPKKDVIPWSFM 314
           +Y K+G   +AR++F+                               E+P KDV+ W+ +
Sbjct: 147 MYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNAL 206

Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL 374
           I+ YA+T    +A+ELF  M +  V P++ T V+VL ACA    ++LG Q+HS +   G 
Sbjct: 207 ISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGF 266

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
            S++ + NAL+D+Y KCG +E +  LF     ++ ++WNT+I GY  +    +A+++F +
Sbjct: 267 GSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQE 326

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK--ANYDMDVVVANALIDMYAKC 492
           ML       EVT  S+L ACA L A++ G  +H    K          +  +LIDMYAKC
Sbjct: 327 MLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKC 386

Query: 493 GSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL 552
           G I  A+ VFD M + +  SWNAMI G++MHG +     +F  M++ G  P+++TFVG+L
Sbjct: 387 GDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLL 446

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
           SACS+ G+L+ G   F+SM  +Y I P +EHY  M+ LLG +G   +A ++I  +   P 
Sbjct: 447 SACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPD 506

Query: 613 VMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW--------- 663
            +IW +LL AC +H NVE+G   AQ+++  EP++  ++VLLSNIYA A  W         
Sbjct: 507 GVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGRWNEVAKRRAL 566

Query: 664 --EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAV 721
             +K   K PG S IE   +VH F  GD  H     I GMLE + +   +AG++PD S V
Sbjct: 567 LNDKGMKKVPGCSSIEIDSVVHEFIIGDKLHPRNREIYGMLEEMEVLLEEAGFVPDTSEV 626

Query: 722 LRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQR 781
           L+++ E+ KE  L  HSEKLA+AF L    P + + I+KNLR+C +CH A K+ISKI +R
Sbjct: 627 LQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKR 686

Query: 782 EIIIRDVHRFHHFQDGCCSC 801
           EII RD  RFHHF DG CSC
Sbjct: 687 EIIARDRTRFHHFXDGVCSC 706



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 138/527 (26%), Positives = 234/527 (44%), Gaps = 65/527 (12%)

Query: 56  SHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD------ 109
           +H   + L +C     LQ+   IH +++K G    L  TN  L+  ++ + L        
Sbjct: 2   NHPSLSLLHNC---KTLQSLRIIHAKMIKTG----LHNTNYALSKLIEFSVLSPHFDGLT 54

Query: 110 -ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLV 168
            A  +FD + E N + + T  +G+ +SS  V A+ L+  +   G   N + F   LK   
Sbjct: 55  YAISVFDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACA 114

Query: 169 SMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD------------ 216
                     +   V KLG D + +V T+LI  +   G  E ARKVFD            
Sbjct: 115 KSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTA 174

Query: 217 ---------------GLFNDC--------------------FEEALNFFSQMRAVGFKPN 241
                           +F++                     ++EAL  F +M     KP+
Sbjct: 175 LIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPD 234

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
             T   VL AC    +I + +  H       +  +L +  AL+DLY K GE+  A  +FE
Sbjct: 235 ESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFE 294

Query: 302 EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL 361
            +  KDVI W+ +I  Y   +L  +A+ LF  M ++  +PN+ T +S+L ACA +  +D+
Sbjct: 295 GLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDI 354

Query: 362 GNQIHSLVVR--VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGY 419
           G  IH  + +   G+ +   +  +L+D+YAKCG +E + ++F     R+  +WN MI G+
Sbjct: 355 GRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGF 414

Query: 420 VQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV-HCLTVKANYDMD 478
              G    A  +FS+M ++ +   ++T+  +L AC+    L+ G  +   +T        
Sbjct: 415 AMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPK 474

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMN-DWNEVSWNAMISGYSMHG 524
           +     +ID+    G   +A  + + M  D + V W +++    MHG
Sbjct: 475 LEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHG 521



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/310 (24%), Positives = 142/310 (45%), Gaps = 39/310 (12%)

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN---SVELFAE 403
           +S+L  C T++ L +   IH+ +++ GL +  +  + L++        +    ++ +F  
Sbjct: 6   LSLLHNCKTLQSLRI---IHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDS 62

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
             + N + WNTM  G+    +   A+ ++  M+   +     T+  +L+ACA   A   G
Sbjct: 63  IQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREG 122

Query: 464 MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMH 523
            Q+H   +K   D+D+ V  +LI MY K G   DAR VFD  +  + VS+ A+I GY+ +
Sbjct: 123 QQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASN 182

Query: 524 GL-------------------------------SAEVLKVFDLMQQRGWRPNNLTFVGVL 552
           G                                  E L++F  M +   +P+  T V VL
Sbjct: 183 GYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVL 242

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
           SAC+    +E G     S + ++G    ++   +++ L  + G ++ A+ L EG+ ++  
Sbjct: 243 SACAQSASIELGRQ-VHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYK-D 300

Query: 613 VMIWRALLGA 622
           V+ W  L+G 
Sbjct: 301 VISWNTLIGG 310


>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
 gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
 gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 741

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 243/624 (38%), Positives = 364/624 (58%), Gaps = 44/624 (7%)

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           AL  +  M ++G  PN++TF FVLK+C      +  +  HG  LK   ++DLYV  +L+ 
Sbjct: 118 ALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLIS 177

Query: 286 LYTKSGE-------------------------------ISNARRIFEEMPKKDVIPWSFM 314
           +Y ++G                                I NA+++F+E+P KDV+ W+ M
Sbjct: 178 MYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAM 237

Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL 374
           I+ YA+T    +A+ELF  M +  V P++ T V+V+ ACA    ++LG Q+H  +   G 
Sbjct: 238 ISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGF 297

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
            S++ + NAL+D+Y+KCG +E +  LF   P ++ ++WNT+I GY  +    +A+++F +
Sbjct: 298 GSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQE 357

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK--ANYDMDVVVANALIDMYAKC 492
           ML       +VT  S+L ACA L A++ G  +H    K          +  +LIDMYAKC
Sbjct: 358 MLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKC 417

Query: 493 GSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL 552
           G I  A  VF+ +   +  SWNAMI G++MHG +     +F  M++ G +P+++TFVG+L
Sbjct: 418 GDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLL 477

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
           SACS+ G+L+ G   F++M  +Y + P +EHY  M+ LLG +G   +A ++I  +  +P 
Sbjct: 478 SACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPD 537

Query: 613 VMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW--------- 663
            +IW +LL AC +H NVE+G   A++++  EPE+  ++VLLSNIYA A  W         
Sbjct: 538 GVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRAL 597

Query: 664 --EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAV 721
             +K   K PG S IE   +VH F  GD  H     I GMLE + +   KAG++PD S V
Sbjct: 598 LNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEV 657

Query: 722 LRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQR 781
           L+++ E+ KE  L  HSEKLA+AF L    P + + I+KNLR+C +CH A K+ISKI +R
Sbjct: 658 LQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKR 717

Query: 782 EIIIRDVHRFHHFQDGCCSCGDFW 805
           EII RD  RFHHF+DG CSC D+W
Sbjct: 718 EIIARDRTRFHHFRDGVCSCNDYW 741



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 102/387 (26%), Positives = 188/387 (48%), Gaps = 39/387 (10%)

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACAT 355
           A  +F+ + + +++ W+ M   +A +   + A++L+  M    + PN +TF  VL++CA 
Sbjct: 87  AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146

Query: 356 MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM--------------------- 394
            +    G QIH  V+++G   D++V  +L+ +Y + GR+                     
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206

Query: 395 ----------ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATE 444
                     EN+ +LF E P ++ V+WN MI GY + G   +A+ +F  M++  V   E
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 266

Query: 445 VTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDM 504
            T  +V+ ACA   ++E G QVH       +  ++ + NALID+Y+KCG +  A  +F+ 
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFER 326

Query: 505 MNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG 564
           +   + +SWN +I GY+   L  E L +F  M + G  PN++T + +L AC++ G ++ G
Sbjct: 327 LPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 386

Query: 565 E---AYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLG 621
                Y    +   G+       TS++ +  + G ++ A ++   I    S+  W A++ 
Sbjct: 387 RWIHVYIDKRLK--GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIF 443

Query: 622 ACIIHNNVE--IGRLSAQHILDFEPED 646
              +H   +      S    +  +P+D
Sbjct: 444 GFAMHGRADASFDLFSRMRKIGIQPDD 470



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 158/360 (43%), Gaps = 49/360 (13%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           NS+++   L+SC ++   +    IH  VLK G  LDL+    L+++YV+  RL DA K+F
Sbjct: 133 NSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVF 192

Query: 115 DEMPERNTISFVTTIQGYTV-------------------------------SSQFVEAVG 143
           D+ P R+ +S+   I+GY                                 +  + EA+ 
Sbjct: 193 DKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALE 252

Query: 144 LFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFS 203
           LF  + +     +       +      G  EL   V   +   G  SN  +  ALID +S
Sbjct: 253 LFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS 312

Query: 204 VCGCVEFARKVFDGL-FNDC---------------FEEALNFFSQMRAVGFKPNNFTFAF 247
            CG +E A  +F+ L + D                ++EAL  F +M   G  PN+ T   
Sbjct: 313 KCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLS 372

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMD--LYVAVALLDLYTKSGEISNARRIFEEMPK 305
           +L AC  L  I + +  H    K    +     +  +L+D+Y K G+I  A ++F  +  
Sbjct: 373 ILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILH 432

Query: 306 KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
           K +  W+ MI  +A    +  + +LF RMR+  + P+  TFV +L AC+    LDLG  I
Sbjct: 433 KSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492


>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
 gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
 gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 790

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 276/832 (33%), Positives = 414/832 (49%), Gaps = 135/832 (16%)

Query: 56  SHSYATSLQSCI--QNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
           ++ YA +L+ C+  +   LQ A  +H  ++  G        N L++VY K + L  A +L
Sbjct: 12  ANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQL 71

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           FDE+ E + I+  T + GY  S     A G+F                   K  V M   
Sbjct: 72  FDEISEPDKIARTTMVSGYCASGDITLARGVFE------------------KAPVCM--- 110

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQM 233
                            +  +  A+I  FS                N+    A+N F +M
Sbjct: 111 ----------------RDTVMYNAMITGFS---------------HNNDGYSAINLFCKM 139

Query: 234 RAVGFKPNNFTFAFVLKA-CLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           +  GFKP+NFTFA VL    L  D  +     H  ALK+       V+ AL+ +Y+K   
Sbjct: 140 KHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCAS 199

Query: 293 ----ISNARRIFEEMPKKDVIPWSFM--------------------------------IA 316
               + +AR++F+E+ +KD   W+ M                                I+
Sbjct: 200 SPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMIS 259

Query: 317 RYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLS 376
            Y       +A+E+  RM  + +  ++FT+ SV++ACAT   L LG Q+H+ V+R    S
Sbjct: 260 GYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFS 319

Query: 377 DVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML 436
             F  N+L+ +Y KCG+ + +  +F + P ++ V+WN ++ GYV  G +G+A ++F +M 
Sbjct: 320 FHF-DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMK 378

Query: 437 EEQV-------------------------------PATEVTYSSVLRACASLAALEPGMQ 465
           E+ +                                  +  +S  +++CA L A   G Q
Sbjct: 379 EKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQ 438

Query: 466 VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGL 525
            H   +K  +D  +   NALI MYAKCG + +AR VF  M   + VSWNA+I+    HG 
Sbjct: 439 YHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGH 498

Query: 526 SAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYT 585
            AE + V++ M ++G RP+ +T + VL+ACS+ GL++QG  YF SM   Y I P  +HY 
Sbjct: 499 GAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYA 558

Query: 586 SMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPE 645
            ++ LL R+G    A  +IE +PF+P+  IW ALL  C +H N+E+G ++A  +    PE
Sbjct: 559 RLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPE 618

Query: 646 DEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHAD 694
            + T++LLSN++A    WE+ A            KE   SWIE +  VH F   DTSH +
Sbjct: 619 HDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPE 678

Query: 695 MNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVRED-EKERYLWVHSEKLALAFALFKMPPS 753
              +   L+ L  + R+ GY+PD S VL DV  D  KE  L  HSEK+A+AF L K+PP 
Sbjct: 679 AEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPG 738

Query: 754 SPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           + IRI KNLR C DCH   + +S +VQR+II+RD  RFHHF++G CSCG+FW
Sbjct: 739 TTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 130/307 (42%), Gaps = 59/307 (19%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E +  +Y + +++C     LQ    +H  VL++ +       N L+++Y K  +  +A  
Sbjct: 283 ELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRED-FSFHFDNSLVSLYYKCGKFDEARA 341

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEA------------------------------- 141
           +F++MP ++ +S+   + GY  S    EA                               
Sbjct: 342 IFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEG 401

Query: 142 VGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDA 201
           + LFS + REG E   +AF+  +K    +G         A + K+G DS+   G ALI  
Sbjct: 402 LKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITM 461

Query: 202 FSVCGCVEFARKVFDGLFNDCFE------------------EALNFFSQMRAVGFKPNNF 243
           ++ CG VE AR+VF  +   C +                  EA++ + +M   G +P+  
Sbjct: 462 YAKCGVVEEARQVFRTM--PCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRI 519

Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEM----DLYVAVALLDLYTKSGEISNARRI 299
           T   VL AC     +   +     +++T Y +    D Y    L+DL  +SG+ S+A  +
Sbjct: 520 TLLTVLTACSHAGLVDQGRKYFD-SMETVYRIPPGADHY--ARLIDLLCRSGKFSDAESV 576

Query: 300 FEEMPKK 306
            E +P K
Sbjct: 577 IESLPFK 583


>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
 gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
          Length = 818

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 273/814 (33%), Positives = 420/814 (51%), Gaps = 70/814 (8%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           ++ T L SC    D+     +H ++       D    N L+++Y K + L DA  +F+ M
Sbjct: 9   TFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESM 68

Query: 118 P--ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAEL 175
              +RN +S+   I  Y  +    EA+ L+  ++ +G   +   F + L    S+     
Sbjct: 69  DWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQGRE 128

Query: 176 CPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF---------------- 219
              +   V+  G DS   +  AL+  ++  G V  A+++F  L                 
Sbjct: 129 ---IHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQ 185

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           +  +  AL  F +M+    KPN+ T+  V+      + +   +  H   +   ++ DL V
Sbjct: 186 SGDWSGALRIFKEMK-CDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVV 244

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
           A AL+++Y K G    AR +F++M K+D++ W+ MI  Y Q     +A+EL+ ++     
Sbjct: 245 ATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGF 304

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
              + TFVS+L AC++++ L  G  +HS ++  GL S+V V+ AL+++YAKCG +E + +
Sbjct: 305 KRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARK 364

Query: 400 LFAESPKRNHVTW----------------------------------NTMIVGYVQLGEV 425
           +F     R+ V W                                  N MI  YVQ G  
Sbjct: 365 VFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCA 424

Query: 426 GKAMIMFSKML-EEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA 484
             AM +F +M     +    VT+ +VL ACASL  L     +H    ++  + +VVV N 
Sbjct: 425 VAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNT 484

Query: 485 LIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPN 544
           LI+MYA+CGS+ +A  +F    +   VSW AM++ +S +G  AE L +F  M   G +P+
Sbjct: 485 LINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPD 544

Query: 545 NLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLI 604
           ++T+  +L  C++GG LEQG  YF  M   +G+ P  +H+ +MV LLGR+G L  A +L+
Sbjct: 545 DVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELL 604

Query: 605 EGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE 664
           E +PF+P  + W   L AC IH  +E+G  +A+ + + +P   A ++ +SNIYA    WE
Sbjct: 605 ESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWE 664

Query: 665 KAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAG 713
           K AS           K PGLS+IE  G +H F +G   H   + I   L  L+   R AG
Sbjct: 665 KVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAG 724

Query: 714 YIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSS-PIRIIKNLRICVDCHTAI 772
           Y+PD  AVL DV E EKE  L  HSEK+A+AF L     S  PIR++KNLR+C DCHTA 
Sbjct: 725 YVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTAT 784

Query: 773 KIISKIVQREIIIRDVHRFHHF-QDGCCSCGDFW 805
           K I++I  R+II+RD +RFH F  DG CSCGD+W
Sbjct: 785 KFIARIAGRDIILRDCNRFHRFSSDGKCSCGDYW 818



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 177/363 (48%), Gaps = 42/363 (11%)

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           P+  TF++VL +C++   +  G  +H  +       D  V NAL+ +Y KC  + ++  +
Sbjct: 5   PDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64

Query: 401 FA--ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
           F   +  +RN V+WN MI  Y Q G   +A++++ +M  + +    VT+ SVL AC+SLA
Sbjct: 65  FESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLA 124

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
               G ++H     +  D    +ANAL+ MYA+ GS+ DA+ +F  +   +E SWNA+I 
Sbjct: 125 ---QGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVIL 181

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
            +S  G  +  L++F  M+    +PN+ T++ V+S  S   +L +G      +VAN G +
Sbjct: 182 AHSQSGDWSGALRIFKEMKC-DMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVAN-GFD 239

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIP------------------------------ 608
             +   T+++++ G+ G   +A ++ + +                               
Sbjct: 240 SDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKL 299

Query: 609 ----FQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDE-ATHVLLSNIYAMARSW 663
               F+ +   + ++LGAC     +  GRL   HIL+   + E A    L N+YA   S 
Sbjct: 300 DMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSL 359

Query: 664 EKA 666
           E+A
Sbjct: 360 EEA 362



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 184/428 (42%), Gaps = 58/428 (13%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           NS +Y   +      + L     IH +++  G   DL     L+N+Y K     +A ++F
Sbjct: 206 NSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVF 265

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D+M +R+ +S+   I  Y  +  F EA+ L+  L  EG +     F + L    S+    
Sbjct: 266 DKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALA 325

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
               V + + + G DS   V TAL++ ++ CG +E ARKVF+ +                
Sbjct: 326 QGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYA 385

Query: 220 -----------------------------------NDCFEEALNFFSQMR-AVGFKPNNF 243
                                              N C   A+  F +M  A G KP+  
Sbjct: 386 SNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAV 445

Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
           TF  VL+AC  L  +   K+ H    ++  E ++ V   L+++Y + G +  A R+F   
Sbjct: 446 TFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAA 505

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
            +K V+ W+ M+A ++Q     +A++LF  M    V P+  T+ S+L  C     L+ G 
Sbjct: 506 KEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGW 565

Query: 364 QIHSLVVRV-GLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMIV---- 417
           +  + +  + GL        A++D+  + GR+ ++ EL    P + + V W T +     
Sbjct: 566 RYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRI 625

Query: 418 -GYVQLGE 424
            G ++LGE
Sbjct: 626 HGKLELGE 633


>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
          Length = 755

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 269/765 (35%), Positives = 402/765 (52%), Gaps = 95/765 (12%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           ++  +N  +  +++  R+ DA +LF  MP R+T ++   + GY+ + +   A  LF  + 
Sbjct: 37  EVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP 96

Query: 150 REGHELNPFAFTAFLKVLV-------SMGWAELCPCVFACVYKLGHDSNAFVGTALIDAF 202
           R     + +++   L  L        + G  +  P   +  Y +           +I + 
Sbjct: 97  RP----DNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNV-----------MISSH 141

Query: 203 SVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAK 262
           +  G V  AR  FD               +  AV +  N    A+V          RV +
Sbjct: 142 ANHGLVSLARHYFD------------LAPEKDAVSW--NGMLAAYVRNG-------RV-E 179

Query: 263 SAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTD 322
            A G    +  E D+    AL+  Y + G++S AR +F+ MP +DV+ W+ M++ YA+  
Sbjct: 180 EARGL-FNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRG 238

Query: 323 LSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSN 382
             ++A  LF     A    + FT+ +V+   A    L+   ++   +     +S     N
Sbjct: 239 DMVEARRLF----DAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVS----WN 290

Query: 383 ALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE---- 438
           A++  Y +   M+ + ELF   P RN  +WNTM+ GY Q G + +A  +F  M ++    
Sbjct: 291 AMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVS 350

Query: 439 ---------QVPATEVT------------------YSSVLRACASLAALEPGMQVHCLTV 471
                    Q   +E T                  ++ VL  CA +AALE GMQ+H   +
Sbjct: 351 WAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLI 410

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
           +A Y +   V NAL+ MY KCG++ DAR  F+ M + + VSWN MI+GY+ HG   E L+
Sbjct: 411 RAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALE 470

Query: 532 VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLL 591
           +FD+M+    +P+++T VGVL+ACS+ GL+E+G +YF SM  ++G+    EHYT M+ LL
Sbjct: 471 IFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLL 530

Query: 592 GRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHV 651
           GRAG L +A  L++ +PF+P   +W ALLGA  IH N E+GR +A+ I + EPE+   +V
Sbjct: 531 GRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYV 590

Query: 652 LLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRG 700
           LLSNIYA +  W           E+   K PG SWIE Q  VH F AGD  H +   I  
Sbjct: 591 LLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYA 650

Query: 701 MLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIK 760
            LE L+M+ +KAGY+     VL DV E+EKE  L  HSEKLA+A+ +  +PP  PIR+IK
Sbjct: 651 FLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIK 710

Query: 761 NLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           NLR+C DCH A K IS I  R I++RD +RFHHF+ G CSCGD+W
Sbjct: 711 NLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 103/252 (40%), Gaps = 28/252 (11%)

Query: 88  CLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFST 147
           C ++ + N +L  Y +   L +A  +FD MP+++ +S+   +  Y+      E + LF  
Sbjct: 314 CRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIE 373

Query: 148 LHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGC 207
           + R G  +N  AF   L     +   E    +   + + G+    FVG AL+  +  CG 
Sbjct: 374 MGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGN 433

Query: 208 VEFARKVFD---------------GLFNDCF-EEALNFFSQMRAVGFKPNNFTFAFVLKA 251
           +E AR  F+               G     F +EAL  F  MR    KP++ T   VL A
Sbjct: 434 MEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAA 493

Query: 252 CLGLDTIRVAKSAHGCALKTCYEMDLYVAVA------LLDLYTKSGEISNARRIFEEMP- 304
           C     +       G +       D  V         ++DL  ++G ++ A  + ++MP 
Sbjct: 494 CSHSGLVE-----KGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPF 548

Query: 305 KKDVIPWSFMIA 316
           + D   W  ++ 
Sbjct: 549 EPDSTMWGALLG 560



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 60/261 (22%), Positives = 103/261 (39%), Gaps = 32/261 (12%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  ++A  L +C     L+  M +H ++++ G  +  F  N LL +Y K   + DA   F
Sbjct: 382 NRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAF 441

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           +EM ER+ +S+ T I GY       EA+ +F  +     + +       L      G  E
Sbjct: 442 EEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVE 501

Query: 175 LCPCVFACVYKLGHDSNAFVG----TALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFF 230
                F   Y + HD          T +ID     G +  A  +                
Sbjct: 502 KGISYF---YSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDL---------------- 542

Query: 231 SQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA---VALLDLY 287
             M+ + F+P++  +     A LG   I         A +  +E++   A   V L ++Y
Sbjct: 543 --MKDMPFEPDSTMWG----ALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIY 596

Query: 288 TKSGEISNARRIFEEMPKKDV 308
             SG+  +AR++   M ++ V
Sbjct: 597 ASSGKWRDARKMRVMMEERGV 617


>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 928

 Score =  454 bits (1168), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 266/784 (33%), Positives = 407/784 (51%), Gaps = 34/784 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N +S +  + SC    D      I  QV+K G    L   N L+++   +  +  A  +F
Sbjct: 142 NENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIF 201

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D+M ER+TIS+ +    Y  +    E+  +FS + R   E+N    +  L VL  +   +
Sbjct: 202 DQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQK 261

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------F 219
               +   V K+G DS   V   L+  ++  G    A  VF  +                
Sbjct: 262 WGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFV 321

Query: 220 NDCFE-EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
           ND    +AL     M + G   N  TF   L AC   D     +  HG  + +    +  
Sbjct: 322 NDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQI 381

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           +  AL+ +Y K GE+S +RR+  +MP++DV+ W+ +I  YA+ +    A+  F  MR   
Sbjct: 382 IGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEG 441

Query: 339 VAPNQFTFVSVLQACATMEG--LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
           V+ N  T VSVL AC  + G  L+ G  +H+ +V  G  SD  V N+L+ +YAKCG + +
Sbjct: 442 VSSNYITVVSVLSAC-LLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSS 500

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           S +LF     RN +TWN M+      G   + + + SKM    V   + ++S  L A A 
Sbjct: 501 SQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAK 560

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           LA LE G Q+H L VK  ++ D  + NA  DMY+KCG I +   +     + +  SWN +
Sbjct: 561 LAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNIL 620

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           IS    HG   EV   F  M + G +P ++TFV +L+ACS+GGL+++G AY+  +  ++G
Sbjct: 621 ISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFG 680

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
           +EP IEH   ++ LLGR+G L +A   I  +P +P+ ++WR+LL +C IH N++ GR +A
Sbjct: 681 LEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAA 740

Query: 637 QHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYF 685
           +++   EPED++ +VL SN++A    WE           K   K+   SW++ +  V  F
Sbjct: 741 ENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSF 800

Query: 686 RAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAF 745
             GD +H     I   LE +    +++GY+ D S  L+D  E++KE  LW HSE+LALA+
Sbjct: 801 GIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAY 860

Query: 746 ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCG--- 802
           AL   P  S +RI KNLRIC DCH+  K +S+++ R I++RD +RFHHF+ G    G   
Sbjct: 861 ALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLFGKGSGF 920

Query: 803 -DFW 805
             FW
Sbjct: 921 QQFW 924



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 159/576 (27%), Positives = 274/576 (47%), Gaps = 19/576 (3%)

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
            +  + +H  V K G   D++ +  +L++Y     +  + K+F+EMP+RN +S+ + + G
Sbjct: 58  FREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVG 117

Query: 132 YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSN 191
           Y+   +  E + ++  +  EG   N  + +  +     +    L   +   V K G +S 
Sbjct: 118 YSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESK 177

Query: 192 AFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRA 235
             V  +LI      G V++A  +FD +                 N   EE+   FS MR 
Sbjct: 178 LAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR 237

Query: 236 VGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISN 295
              + N+ T + +L     +D  +  +  HG  +K  ++  + V   LL +Y  +G    
Sbjct: 238 FHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVE 297

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACAT 355
           A  +F++MP KD+I W+ ++A +     S+DA+ L C M  +  + N  TF S L AC T
Sbjct: 298 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFT 357

Query: 356 MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTM 415
            +  + G  +H LVV  GL  +  + NAL+ +Y K G M  S  +  + P+R+ V WN +
Sbjct: 358 PDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNAL 417

Query: 416 IVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA-LEPGMQVHCLTVKAN 474
           I GY +  +  KA+  F  M  E V +  +T  SVL AC      LE G  +H   V A 
Sbjct: 418 IGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAG 477

Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
           ++ D  V N+LI MYAKCG ++ ++ +F+ +++ N ++WNAM++  + HG   EVLK+  
Sbjct: 478 FESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVS 537

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
            M+  G   +  +F   LSA +   +LE+G+     +    G E     + +   +  + 
Sbjct: 538 KMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQ-LHGLAVKLGFEHDSFIFNAAADMYSKC 596

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
           G + +  K++       S+  W  L+ A   H   E
Sbjct: 597 GEIGEVVKMLP-PSVNRSLPSWNILISALGRHGYFE 631



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 144/533 (27%), Positives = 250/533 (46%), Gaps = 22/533 (4%)

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG--WAE 174
           MP RN +S+ T + G      ++E +  F  +   G + + F   + +      G  + E
Sbjct: 1   MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL--------------FN 220
               V   V K G  S+ +V TA++  + V G V  +RKVF+ +              ++
Sbjct: 61  GVQ-VHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYS 119

Query: 221 DCFE--EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
           D  E  E ++ +  MR  G   N  + + V+ +C  L    + +   G  +K+  E  L 
Sbjct: 120 DKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLA 179

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V  +L+ +    G +  A  IF++M ++D I W+ + A YAQ     ++  +F  MR+  
Sbjct: 180 VENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH 239

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
              N  T  ++L     ++    G  IH LVV++G  S V V N L+ +YA  GR   + 
Sbjct: 240 DEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEAN 299

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            +F + P ++ ++WN+++  +V  G    A+ +   M+        VT++S L AC +  
Sbjct: 300 LVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPD 359

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
             E G  +H L V +    + ++ NAL+ MY K G ++++R V   M   + V+WNA+I 
Sbjct: 360 FFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIG 419

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSAC-SNGGLLEQGEAYFKSMVANYGI 577
           GY+      + L  F  M+  G   N +T V VLSAC   G LLE+G+    + + + G 
Sbjct: 420 GYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKP-LHAYIVSAGF 478

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
           E       S++++  + G L  +  L  G+    +++ W A+L A   H + E
Sbjct: 479 ESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGHGE 530



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 125/492 (25%), Positives = 232/492 (47%), Gaps = 21/492 (4%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E NS + +T L      D  +    IH  V+K G    +   N LL +Y    R  +A  
Sbjct: 241 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 300

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +F +MP ++ IS+ + +  +    + ++A+GL  ++   G  +N   FT+ L    +  +
Sbjct: 301 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 360

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKV-----------FDGLFND 221
            E    +   V   G   N  +G AL+  +   G +  +R+V           ++ L   
Sbjct: 361 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 420

Query: 222 CFEE-----ALNFFSQMRAVGFKPNNFTFAFVLKAC-LGLDTIRVAKSAHGCALKTCYEM 275
             E+     AL  F  MR  G   N  T   VL AC L  D +   K  H   +   +E 
Sbjct: 421 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 480

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
           D +V  +L+ +Y K G++S+++ +F  +  +++I W+ M+A  A      + ++L  +MR
Sbjct: 481 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR 540

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
              V+ +QF+F   L A A +  L+ G Q+H L V++G   D F+ NA  D+Y+KCG + 
Sbjct: 541 SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIG 600

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
             V++   S  R+  +WN +I    + G   +    F +MLE  +    VT+ S+L AC+
Sbjct: 601 EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACS 660

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANAL--IDMYAKCGSITDAR-LVFDMMNDWNEVS 512
               ++ G+  + +  + ++ ++  + + +  ID+  + G + +A   +  M    N++ 
Sbjct: 661 HGGLVDKGLAYYDMIAR-DFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLV 719

Query: 513 WNAMISGYSMHG 524
           W ++++   +HG
Sbjct: 720 WRSLLASCKIHG 731


>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 808

 Score =  454 bits (1168), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 283/825 (34%), Positives = 431/825 (52%), Gaps = 90/825 (10%)

Query: 32  AALSTQQCSNSTTTP-ITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLD 90
           +AL +      T  P IT S+ E       T L +C    +L+    I  Q++  G   D
Sbjct: 23  SALKSTFNHKPTFKPTITLSILE-------THLHNC---HNLKQFNRILSQMILTGFISD 72

Query: 91  LFATNVLLNVYVK--LNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTL 148
            FA + LL          L  + ++FD +   N   + T ++ Y  S+   +A+ L+  +
Sbjct: 73  TFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLM 132

Query: 149 HREGHELNPFAFTAFLKV------LVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAF 202
            +  + + P  +T  L V      L+  G  E    +   V K+G DS+ +V   LI+ +
Sbjct: 133 VK--NNVGPDNYTYPLVVQACAVRLLEFGGKE----IHDHVLKVGFDSDVYVQNTLINMY 186

Query: 203 SVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAK 262
           +VCG +  ARK+FD          L+  S         N+    +V K       +  AK
Sbjct: 187 AVCGNMRDARKLFDE------SPVLDSVSW--------NSILAGYVKKG-----DVEEAK 227

Query: 263 SAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTD 322
                      + ++  + +++ L  K G++  A ++F EM +KD++ WS +I+ Y Q  
Sbjct: 228 ----LIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNG 283

Query: 323 LSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSN 382
           +  +A+ +F  M    +  ++   VSVL ACA +  +  G  IH LV+R+G+ S V + N
Sbjct: 284 MYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQN 343

Query: 383 ALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE---- 438
           AL+ +Y+  G + ++ +LF  S   + ++WN+MI G ++ G V KA  +F  M E+    
Sbjct: 344 ALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVS 403

Query: 439 ---------------------------QVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
                                      Q+   E    SV+ AC  LAAL+ G  VH    
Sbjct: 404 WSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIR 463

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
           K    ++V++   L+DMY KCG + +A  VF+ M +    SWNA+I G +++GL    L 
Sbjct: 464 KNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLD 523

Query: 532 VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLL 591
           +F  M+  G  PN +TF+GVL AC + GL+++G  +F SM+  +GIEP ++HY  MV LL
Sbjct: 524 MFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLL 583

Query: 592 GRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHV 651
           GRAG L++A KLIE +P  P V  W ALLGAC  H + E+G    + +++ +P+ +  HV
Sbjct: 584 GRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHV 643

Query: 652 LLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRG 700
           LLSNI+A    WE           +   K PG S IE  G+VH F AGD +H  +N + G
Sbjct: 644 LLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEG 703

Query: 701 MLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIK 760
           ML  +  + +  GY PD + V  D+ E+EKE  L+ HSEKLA+AF L  + P +PIRI+K
Sbjct: 704 MLNEMAKRLKMEGYAPDTNEVSLDIDEEEKETTLFRHSEKLAIAFGLLTISPPTPIRIMK 763

Query: 761 NLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           NLRIC DCHTA K+ISK   REI++RD HRFH+F++G CSC D+W
Sbjct: 764 NLRICNDCHTAAKLISKAYAREIVVRDRHRFHYFKEGACSCMDYW 808


>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  454 bits (1168), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 265/789 (33%), Positives = 418/789 (52%), Gaps = 33/789 (4%)

Query: 50  SVSEF--NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRL 107
           SV+EF  ++ ++   +++C    D+    ++H   +K G  +DLF  N ++ +Y K   L
Sbjct: 202 SVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFL 261

Query: 108 PDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFT--AFLK 165
            +A +LFD+MPE+N IS+ + I+G++ +  ++EA   F +L   G  L P   T    L 
Sbjct: 262 DEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLP 321

Query: 166 VLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF-- 223
           V    G  ++   +     KLG      V  ALID +S CGC+  A  +F  + N     
Sbjct: 322 VCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVS 381

Query: 224 ---------EEALNF--FSQMRAVGFKP-----NNFTFAFVLKACLGLDTIRVAKSAHGC 267
                     E   F  F  +R +  +      N  T   +L ACL    +   ++ HG 
Sbjct: 382 WNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGY 441

Query: 268 ALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDA 327
           +L+  ++    +  A +  Y K G +  A  +F  M  K V  W+ +I  +AQ    I A
Sbjct: 442 SLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKA 501

Query: 328 VELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDV 387
           ++ +  M +  + P+ F+ VS+L AC  +  L  G +IH  V+R GL  + FV+ +L+ +
Sbjct: 502 LDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSL 561

Query: 388 YAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTY 447
           Y  C +       F     +N V WN M+ GY Q     +A+ +F +ML + +   E+  
Sbjct: 562 YFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAI 621

Query: 448 SSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND 507
           +S+L AC+ L+AL  G +VHC  +K +   D  VA +L+DMYAK G +  ++ +F+ +N 
Sbjct: 622 ASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNG 681

Query: 508 WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAY 567
               SWN MI+G+ +HG   + +++F+ M++   +P+  TF+GVL AC + GL+ +G  Y
Sbjct: 682 KEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNY 741

Query: 568 FKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
              M   Y +EP +EHY  ++ +LGRAG L++A   I  +P +P   IW +LL + I + 
Sbjct: 742 LAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYV 801

Query: 628 NVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEK-----------AASKEPGLSWI 676
           ++E+G   A+ +L  E     +++LLSN+YA A  W+            +  K+ G SWI
Sbjct: 802 DLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWI 861

Query: 677 ENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWV 736
           E +G V+ F AG+ S+   + IR M   L  +  + GY PD S VL ++ E EK + L  
Sbjct: 862 ELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKILKG 921

Query: 737 HSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQD 796
           HSEK+A+ F        + +RI KNLRIC DCH A K ISK  +REI+IRD  RFHHF+ 
Sbjct: 922 HSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFKK 981

Query: 797 GCCSCGDFW 805
           G CSCGD+W
Sbjct: 982 GICSCGDYW 990



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 127/393 (32%), Positives = 219/393 (55%), Gaps = 21/393 (5%)

Query: 194 VGTALIDAFSVCGCVEFARKVFDGLFN----------------DCFEEALNFFSQMRAVG 237
           + T LI  +S+CG    +R VFD L N                + ++EA++ F ++ +V 
Sbjct: 145 LNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVT 204

Query: 238 -FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNA 296
            F+P+NFTF  ++KAC G   I + KS HG A+K    MDL+V  A++ LY K G +  A
Sbjct: 205 EFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEA 264

Query: 297 RRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA--FVAPNQFTFVSVLQACA 354
             +F++MP++++I W+ +I  +++    ++A   F  + ++   + P+  T V++L  C+
Sbjct: 265 VELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCS 324

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
               +D+G  IH + V++GL+ ++ V NAL+D+Y+KCG +  +  LF +   ++ V+WN+
Sbjct: 325 GEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNS 384

Query: 415 MIVGYVQLGEVGKAMIMFSKML--EEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
           MI  Y + G V +   +  KM   EE +   EVT  ++L AC   + L     +H  +++
Sbjct: 385 MIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLR 444

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
            ++    ++ NA I  YAKCGS+  A  VF  MN  +  SWNA+I G++ +G   + L  
Sbjct: 445 HSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDF 504

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE 565
           +  M + G  P++ + V +L AC   GLL+ G+
Sbjct: 505 YFEMTRLGILPDDFSIVSLLLACGRLGLLQYGK 537



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 137/526 (26%), Positives = 228/526 (43%), Gaps = 24/526 (4%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL-FDEMPERN 121
           LQ C Q  +++    +   +         F  N  L     +   P  ++L FD +  +N
Sbjct: 114 LQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKN 173

Query: 122 TISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNP--FAFTAFLKVLVSMGWAELCPCV 179
              +   + GY  +  + EA+  F  L     E  P  F F   +K         L   V
Sbjct: 174 LFQWNALVSGYVRNELYDEAIHTFLELISV-TEFQPDNFTFPCLIKACTGKCDIHLGKSV 232

Query: 180 FACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCF 223
                K+G   + FVG A+I  +  CG ++ A ++FD +                 N  +
Sbjct: 233 HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFW 292

Query: 224 EEALNFFSQM--RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
            EA   F  +     G  P+  T   +L  C G   + V    HG A+K     +L V  
Sbjct: 293 LEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCN 352

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR--MRQAFV 339
           AL+D+Y+K G +S A  +F ++  K V+ W+ MI  Y++     +  +L  +  M +  +
Sbjct: 353 ALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELM 412

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
             N+ T +++L AC     L     +H   +R        ++NA +  YAKCG +  +  
Sbjct: 413 EVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEH 472

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +F     ++  +WN +I G+ Q G+  KA+  + +M    +   + +  S+L AC  L  
Sbjct: 473 VFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGL 532

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
           L+ G ++H   ++   +M+  VA +L+ +Y  C      R  F+ M D N V WNAM+SG
Sbjct: 533 LQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSG 592

Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE 565
           YS + L  E L +F  M   G  P+ +    +L ACS    L  G+
Sbjct: 593 YSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGK 638



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 190/360 (52%), Gaps = 23/360 (6%)

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
           D  +   L+ +Y+  G    +R +F+ +  K++  W+ +++ Y + +L  +A+  F  + 
Sbjct: 142 DFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELI 201

Query: 336 QAF-VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
                 P+ FTF  +++AC     + LG  +H + V++GL+ D+FV NA++ +Y KCG +
Sbjct: 202 SVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFL 261

Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ---VPATEVTYSSVL 451
           + +VELF + P++N ++WN++I G+ + G   +A   F  +LE     +P    T  ++L
Sbjct: 262 DEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDV-ATMVTLL 320

Query: 452 RACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEV 511
             C+    ++ GM +H + VK     +++V NALIDMY+KCG +++A ++F  + + + V
Sbjct: 321 PVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVV 380

Query: 512 SWNAMISGYSMHGLSAEVLKVFDL-----MQQRGWRPNNLTFVGVLSACSNGGLLEQGEA 566
           SWN+MI  YS  G    V + FDL     M++     N +T + +L AC     LE+ E 
Sbjct: 381 SWNSMIGAYSREGF---VFETFDLLRKMWMEEELMEVNEVTILNLLPAC-----LEESEL 432

Query: 567 YFKSMVANYGIEPCIEHY----TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
                +  Y +    ++      + ++   + G L  A  +  G+  + SV  W A++G 
Sbjct: 433 LSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTK-SVSSWNAVIGG 491



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 94/173 (54%), Gaps = 4/173 (2%)

Query: 450 VLRACASLAALEPGMQV-HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDW 508
           +L+ C     +E G ++   L V + +  D V+   LI MY+ CG   ++RLVFD + + 
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK 172

Query: 509 NEVSWNAMISGYSMHGLSAEVLKVF-DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAY 567
           N   WNA++SGY  + L  E +  F +L+    ++P+N TF  ++ AC+    +  G++ 
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKS- 231

Query: 568 FKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
              M    G+   +    +M++L G+ G LD+A +L + +P Q +++ W +L+
Sbjct: 232 VHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQ-NLISWNSLI 283


>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1724

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 257/782 (32%), Positives = 418/782 (53%), Gaps = 34/782 (4%)

Query: 55   NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
            N +++AT   SC   +D      +   +++ G    +   N L++++   + + +A  +F
Sbjct: 946  NQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVF 1005

Query: 115  DEMPERNTISFVTTIQGYTVSSQFVEAVGLF---STLHREGHELNPFAFTAFLKVLVSMG 171
            D M E + IS+   I  Y       E++  F     LH E +     +  +    + ++ 
Sbjct: 1006 DHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLK 1065

Query: 172  WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND---------- 221
            W      +   V KLG DSN  +   L+  +S  G  E A  VF  +             
Sbjct: 1066 WGR---GIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMA 1122

Query: 222  CFEE------ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
            C+ +       L   +++  +G   N+ TFA  L AC   + +  +K  H   +   +  
Sbjct: 1123 CYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHD 1182

Query: 276  DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
             L V  AL+ +Y K G +  A+++ + MP+ D + W+ +I  +A+ +   +AV+ +  +R
Sbjct: 1183 FLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIR 1242

Query: 336  QAFVAPNQFTFVSVLQACATMEGL-DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
            +  +  N  T VSVL AC+  + L   G  IH+ +V  G  SD +V N+L+ +YAKCG +
Sbjct: 1243 EKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDL 1302

Query: 395  ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
             +S  +F     ++ +TWN M+      G   +A+ +F +M    V   + ++S  L A 
Sbjct: 1303 NSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAAT 1362

Query: 455  ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
            A+LA LE G Q+H L +K  ++ D+ V NA +DMY KCG + D   +     + + +SWN
Sbjct: 1363 ANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWN 1422

Query: 515  AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
             +IS ++ HG   +  + F  M + G +P+++TFV +LSAC++GGL+++G AY+ SM   
Sbjct: 1423 ILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTRE 1482

Query: 575  YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL 634
            +G+ P IEH   ++ LLGR+G L  A   I+ +P  P+ + WR+LL AC IH N+E+ R 
Sbjct: 1483 FGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARK 1542

Query: 635  SAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVH 683
            +A+H+L+ +P D++ +VL SN+ A +  WE   +           K+P  SW++ +  VH
Sbjct: 1543 TAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVH 1602

Query: 684  YFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLAL 743
             F  G+  H   + I   L  L   +++AGY+PD S  L D+ E++KE  LW HSE+LAL
Sbjct: 1603 SFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLAL 1662

Query: 744  AFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGD 803
            AF L   P SS +RI KNLR+C DCH+  K +S IV R+I++RD +RFHHF  G CSCGD
Sbjct: 1663 AFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSCGD 1722

Query: 804  FW 805
            +W
Sbjct: 1723 YW 1724



 Score =  305 bits (780), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 199/671 (29%), Positives = 333/671 (49%), Gaps = 49/671 (7%)

Query: 127 TTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKL 186
           + IQ      +  EA+ L S+       L+P  +   L++ +     +    +   +   
Sbjct: 3   SKIQSACNLGRLAEALKLLSS---NPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITN 59

Query: 187 GHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFF 230
           G  S+  + T LI  +   G V  AR VFDG+                 N  FE+A   F
Sbjct: 60  GFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLF 119

Query: 231 SQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKS 290
           S MR  G K N FT+   L+AC  L  + +     GC  K  +  +L+V  AL+D ++K 
Sbjct: 120 SDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKC 179

Query: 291 GEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVL 350
           G++ +A  +F  M ++DV+ W+ MI  YA    + D+  +F  M +  + P+ +T  SVL
Sbjct: 180 GKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVL 239

Query: 351 QACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHV 410
           +A A   GL + NQIH ++ ++G  S   V+  L++ YAK G + ++ +L     K++  
Sbjct: 240 RASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLF 299

Query: 411 TWNTMIVGYVQLGEVG-KAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCL 469
           +   +I GY   G     A+ +F +M +  +   +V   S+L  CA+LA+   G Q+H  
Sbjct: 300 SSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAF 359

Query: 470 TVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEV 529
            +K     DV + NALIDMYAK G I DA+  FD M + N +SW ++ISGY+ HG     
Sbjct: 360 ALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMA 419

Query: 530 LKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVS 589
           + ++  M+ +G++PN++TF+ +L ACS+ GL  +G   F +MV  Y I+P  EHY+ MV 
Sbjct: 420 VSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVD 479

Query: 590 LLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEAT 649
           L  R G L++A  L+  I  + +  +W A+LGA  I+  + +G+ +A ++ + +PE+   
Sbjct: 480 LFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSVN 539

Query: 650 HVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNII 698
           +V+L++IY+ A  W           E++  K  G S         +F+A   S   + + 
Sbjct: 540 YVVLASIYSAAGLWDDAWKIRKLMEERSTKKNAGYS---------FFQATKKSIPLLQVQ 590

Query: 699 RGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERY--LWVHSEKLALAFALFKMPPSSPI 756
            G+       SR+   I D  A+    R  ++E +   +V         A++K      +
Sbjct: 591 HGV-------SRRDFNILDFGAIFLSNRTPQEECFPDTFVLEPSFLPPSAVWKSSDHRSV 643

Query: 757 RIIKNLRICVD 767
           ++  NL + VD
Sbjct: 644 QLNGNLTVSVD 654



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 170/598 (28%), Positives = 292/598 (48%), Gaps = 28/598 (4%)

Query: 78   IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
            +H  V+K G   D++    L++ Y  +  + +A KLF+EMP+ N +S+ + + GY+ S  
Sbjct: 868  VHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGN 927

Query: 138  FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE---LCPCVFACVYKLGHDSNAFV 194
              E + ++  + +EG   N      F  V  S G  E   L   V   + + G + +  V
Sbjct: 928  PGEVLNVYQRMRQEGVSGNQ---NTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSV 984

Query: 195  GTALIDAFSVCGCVEFARKVFDGLFNDC-----------------FEEALNFFSQMRAVG 237
              +LI  FS    VE A  VFD + N+C                   E+L  F  MR + 
Sbjct: 985  ANSLISMFSSFSSVEEACYVFDHM-NECDIISWNAMISAYAHHGLCRESLRCFHWMRHLH 1043

Query: 238  FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR 297
             + N+ T + +L  C  +D ++  +  HG  +K   + ++ +   LL LY+++G   +A 
Sbjct: 1044 NETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAE 1103

Query: 298  RIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATME 357
             +F+ M ++D+I W+ M+A Y Q    +D +++   + Q     N  TF S L AC+  E
Sbjct: 1104 LVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPE 1163

Query: 358  GLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIV 417
             L     +H+L++  G    + V NAL+ +Y K G M  + ++    P+ + VTWN +I 
Sbjct: 1164 CLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIG 1223

Query: 418  GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC-ASLAALEPGMQVHCLTVKANYD 476
            G+ +  E  +A+  +  + E+ +PA  +T  SVL AC A    L+ GM +H   V   ++
Sbjct: 1224 GHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFE 1283

Query: 477  MDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLM 536
             D  V N+LI MYAKCG +  +  +FD + + + ++WNAM++  + HG   E LK+F  M
Sbjct: 1284 SDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEM 1343

Query: 537  QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGH 596
            +  G   +  +F G L+A +N  +LE+G+     +V   G E  +    + + + G+ G 
Sbjct: 1344 RNVGVNLDQFSFSGGLAATANLAVLEEGQQ-LHGLVIKLGFESDLHVTNAAMDMYGKCGE 1402

Query: 597  LDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPE-DEATHVLL 653
            +    K++   P   S + W  L+ A   H   +  R +   +L   P+ D  T V L
Sbjct: 1403 MHDVLKMLPQ-PINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSL 1459



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 165/556 (29%), Positives = 281/556 (50%), Gaps = 20/556 (3%)

Query: 89   LDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTL 148
            L +F TN L+N+Y K   +  A  +FDEM  RN  S+ T + GY     + EAVGLF  +
Sbjct: 777  LGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQM 836

Query: 149  HREGHELNPFAFTAFLKVLVSMGW-AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGC 207
               G E N F   + +      G+ A+    V   V K G   + +VGTAL+  +   G 
Sbjct: 837  WGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGL 896

Query: 208  VEFARKVFDGL--------------FNDCFE--EALNFFSQMRAVGFKPNNFTFAFVLKA 251
            V  A+K+F+ +              ++D     E LN + +MR  G   N  TFA V  +
Sbjct: 897  VYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSS 956

Query: 252  CLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPW 311
            C  L+   +     G  ++  +E  + VA +L+ +++    +  A  +F+ M + D+I W
Sbjct: 957  CGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISW 1016

Query: 312  SFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR 371
            + MI+ YA   L  +++  F  MR      N  T  S+L  C++++ L  G  IH LVV+
Sbjct: 1017 NAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVK 1076

Query: 372  VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIM 431
            +GL S+V + N L+ +Y++ GR E++  +F    +R+ ++WN+M+  YVQ G+    + +
Sbjct: 1077 LGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKI 1136

Query: 432  FSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAK 491
             +++L+       VT++S L AC++   L     VH L + A +   ++V NAL+ MY K
Sbjct: 1137 LAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGK 1196

Query: 492  CGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGV 551
             G + +A+ V   M   + V+WNA+I G++ +    E +K + L++++G   N +T V V
Sbjct: 1197 LGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSV 1256

Query: 552  LSACSN-GGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQ 610
            L ACS    LL+ G      +V   G E       S++++  + G L+ +  + +G+   
Sbjct: 1257 LGACSAPDDLLKHGMPIHAHIVLT-GFESDDYVKNSLITMYAKCGDLNSSNYIFDGLG-N 1314

Query: 611  PSVMIWRALLGACIIH 626
             S + W A++ A   H
Sbjct: 1315 KSPITWNAMVAANAHH 1330



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 204/382 (53%), Gaps = 4/382 (1%)

Query: 247  FVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK 306
            F LK    + +    K+ H   +     + ++    L+++Y+K G I +AR +F+EM  +
Sbjct: 749  FPLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHR 808

Query: 307  DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL-DLGNQI 365
            +   WS M++ Y +  L  +AV LFC+M    V PN F   S++ AC+    + D G Q+
Sbjct: 809  NEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQV 868

Query: 366  HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEV 425
            H  VV+ G+L DV+V  AL+  Y   G + N+ +LF E P  N V+W +++VGY   G  
Sbjct: 869  HGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNP 928

Query: 426  GKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANAL 485
            G+ + ++ +M +E V   + T+++V  +C  L     G QV    ++  ++  V VAN+L
Sbjct: 929  GEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSL 988

Query: 486  IDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNN 545
            I M++   S+ +A  VFD MN+ + +SWNAMIS Y+ HGL  E L+ F  M+      N+
Sbjct: 989  ISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNS 1048

Query: 546  LTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
             T   +LS CS+   L+ G      +V   G++  +    ++++L   AG  + A  + +
Sbjct: 1049 TTLSSLLSVCSSVDNLKWGRG-IHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQ 1107

Query: 606  GIPFQPSVMIWRALLGACIIHN 627
             +  +  ++ W +++ AC + +
Sbjct: 1108 AMT-ERDLISWNSMM-ACYVQD 1127



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 134/489 (27%), Positives = 229/489 (46%), Gaps = 27/489 (5%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           Y   LQ CI     +    IH  ++  G   DL     L+  YVK+  +  A  +FD MP
Sbjct: 33  YLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMP 92

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
           ER+ +S+   + GY+ + +F +A  LFS +   G + N F + + L+   S+   ++   
Sbjct: 93  ERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQ 152

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF--------------------DGL 218
           V  C+ K     N FV +AL+D  S CG +E A  +F                     G 
Sbjct: 153 VQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGF 212

Query: 219 FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            +D F      F  M   G  P+ +T   VL+A      + +A   HG   +  Y     
Sbjct: 213 ADDSF----CMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDI 268

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDL-SIDAVELFCRMRQA 337
           V   L++ Y K+G + +A+ + + M KKD+   + +I  YA   + S+DA++LF  M Q 
Sbjct: 269 VTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQM 328

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            +  +     S+L  CA +    LG QIH+  ++     DV + NAL+D+YAK G +E++
Sbjct: 329 NIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDA 388

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
              F E  ++N ++W ++I GY + G    A+ ++ KM  +     +VT+ S+L AC+  
Sbjct: 389 KRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHT 448

Query: 458 AALEPGMQ-VHCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNA 515
                G +  + +  K N        + ++D++A+ G + +A  L+  +    N   W A
Sbjct: 449 GLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGA 508

Query: 516 MISGYSMHG 524
           ++   S++G
Sbjct: 509 ILGASSIYG 517



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 102/397 (25%), Positives = 186/397 (46%), Gaps = 30/397 (7%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +Y ++L++C     L   + +   + K     +LF  + L++ + K  ++ DA+ LF
Sbjct: 130 NQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLF 189

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             M ER+ +S+   I GY V     ++  +F ++ R G   + +   + L+     G   
Sbjct: 190 GTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLI 249

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF-NDCFE--------- 224
           +   +   + +LG+ S   V   LI+A++  G +  A+ +  G+   D F          
Sbjct: 250 IANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYA 309

Query: 225 -------EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
                  +AL+ F +M  +    ++     +L  C  L +  +    H  ALK     D+
Sbjct: 310 HEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDV 369

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
            +  AL+D+Y KSGEI +A+R F+EM +K+VI W+ +I+ YA+      AV L+ +M   
Sbjct: 370 AMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESK 429

Query: 338 FVAPNQFTFVSVLQACA----TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
              PN  TF+S+L AC+    T EG +  N   ++V +  +       + ++D++A+ G 
Sbjct: 430 GFKPNDVTFLSLLFACSHTGLTAEGCECFN---NMVNKYNIKPRAEHYSCMVDLFARQGL 486

Query: 394 MENSVELFAE-SPKRNHVTWNTM-----IVGYVQLGE 424
           +E +  L  +   K N   W  +     I GY+ LG+
Sbjct: 487 LEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGK 523


>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
          Length = 697

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 237/655 (36%), Positives = 379/655 (57%), Gaps = 28/655 (4%)

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF---------------DGLF-NDC 222
           + A +   G   N F+  +L++A+  CG +  A+++F                GL  NDC
Sbjct: 43  IHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKNDC 102

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
           F EA++ F +M    FKPN  T + VL A   L  IR+AKS H   ++  +E +++V  A
Sbjct: 103 FVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETA 162

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+D+Y+K G +  AR++FE M +++V+ W+ +++ Y+    S +A++LF  MR+  +  +
Sbjct: 163 LVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVD 222

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
            +T +S++ A  ++  L +G  IH  ++R G  +D  +  ALMD+Y     ++++  +F+
Sbjct: 223 FYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFS 282

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ-VPATEVTYSSVLRACASLAALE 461
           E   ++   W  M+ G+       +A+  F+KML  Q +    +    +L +C+   AL+
Sbjct: 283 EMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQ 342

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
            G +VH L +K  +  ++ V +A+IDMYA CG++ DA+  F  M + + V WNAMI+G  
Sbjct: 343 QGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNG 402

Query: 522 MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
           M+G   + + +F  M+  G  P+  TFV VL ACS+ G++ +G   F  MV      P +
Sbjct: 403 MNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDIPNL 462

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
           +HY  ++ +LGRAG LD A   I  +PFQP   ++  LLGAC IH N+++G   +Q I +
Sbjct: 463 QHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFE 522

Query: 642 FEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDT 690
            EP D   +VLLSN+YA+A +WE           K   K+PG S IE    ++ F AG+ 
Sbjct: 523 MEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRLKKDPGFSSIEINQEIYTFMAGEK 582

Query: 691 SHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKM 750
            H     I G+L+ L +K +KAGY+P+ + +L+DV +D K+  L+ HSEK+A+AF L + 
Sbjct: 583 DHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAIAFGLMRT 642

Query: 751 PPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            P + IRI KNLR C DCH+A K +SK+  R ++I+D +RFH FQDG CSC D+W
Sbjct: 643 KPGTIIRITKNLRTCNDCHSASKFVSKVFGRVLVIKDANRFHVFQDGVCSCRDYW 697



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/446 (27%), Positives = 220/446 (49%), Gaps = 18/446 (4%)

Query: 71  DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQ 130
           DL+    IH Q++  G   + F +N L+N YV    L DA ++F   P +N +S+   I 
Sbjct: 36  DLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILIS 95

Query: 131 GYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDS 190
           G   +  FVEA+ +F  +     + N    ++ L    ++G   +   V     + G + 
Sbjct: 96  GLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEG 155

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFD---------------GLFNDCF-EEALNFFSQMR 234
           N FV TAL+D +S  GC+  AR++F+               G  +  F EEA++ F+ MR
Sbjct: 156 NVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMR 215

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
             G   + +T   ++ A L +  ++V    HG  ++T YE D ++  AL+D+Y     + 
Sbjct: 216 RKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVD 275

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ-AFVAPNQFTFVSVLQAC 353
           +A R+F EM  KDV  W+ M+  ++       A++ F +M     +  +    + +L +C
Sbjct: 276 DAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSC 335

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
           +    L  G ++H+L ++    +++FV +A++D+YA CG +E++   F    +++ V WN
Sbjct: 336 SHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWN 395

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
            MI G    G    A+ +F +M    +   E T+ SVL AC+    +  G+Q+    VK 
Sbjct: 396 AMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKT 455

Query: 474 NYDMDVVVANA-LIDMYAKCGSITDA 498
           ++D+  +   A +ID+  + G +  A
Sbjct: 456 SHDIPNLQHYACVIDILGRAGQLDAA 481



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 190/373 (50%), Gaps = 11/373 (2%)

Query: 255 LDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFM 314
           L  ++  +  H   + +    + +++ +L++ Y   G +++A++IF   P K+V+ W+ +
Sbjct: 34  LKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTIL 93

Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL 374
           I+  A+ D  ++A+++F  M      PN  T  SVL A A +  + +   +H   VR G 
Sbjct: 94  ISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGF 153

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
             +VFV  AL+D+Y+K G M  + +LF    +RN V+WN ++ GY   G   +A+ +F+ 
Sbjct: 154 EGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNL 213

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGS 494
           M  + +     T  S++ A  S+  L+ G  +H   ++  Y+ D  +  AL+D+Y     
Sbjct: 214 MRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNC 273

Query: 495 ITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD-LMQQRGWRPNNLTFVGVLS 553
           + DA  VF  M   +  +W  M++G+S        +K F+ ++  +  + +++  +G+LS
Sbjct: 274 VDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILS 333

Query: 554 ACSNGGLLEQGEAYFKSMVANYGIEPCIEHY----TSMVSLLGRAGHLDKAAKLIEGIPF 609
           +CS+ G L+QG       V    I+ C  +     ++++ +    G+L+ A +   G+  
Sbjct: 334 SCSHSGALQQGRR-----VHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMG- 387

Query: 610 QPSVMIWRALLGA 622
           +  V+ W A++  
Sbjct: 388 EKDVVCWNAMIAG 400



 Score = 43.1 bits (100), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 28/127 (22%), Positives = 53/127 (41%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L SC  +  LQ    +H   +K     ++F  + ++++Y     L DA + F  M E++ 
Sbjct: 332 LSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDV 391

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           + +   I G  ++    +A+ LF  +   G + +   F + L      G       +F  
Sbjct: 392 VCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYH 451

Query: 183 VYKLGHD 189
           + K  HD
Sbjct: 452 MVKTSHD 458


>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 265/789 (33%), Positives = 418/789 (52%), Gaps = 33/789 (4%)

Query: 50  SVSEF--NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRL 107
           SV+EF  ++ ++   +++C    D+    ++H   +K G  +DLF  N ++ +Y K   L
Sbjct: 202 SVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFL 261

Query: 108 PDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFT--AFLK 165
            +A +LFD+MPE+N IS+ + I+G++ +  ++EA   F +L   G  L P   T    L 
Sbjct: 262 DEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLP 321

Query: 166 VLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF-- 223
           V    G  ++   +     KLG      V  ALID +S CGC+  A  +F  + N     
Sbjct: 322 VCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVS 381

Query: 224 ---------EEALNF--FSQMRAVGFKP-----NNFTFAFVLKACLGLDTIRVAKSAHGC 267
                     E   F  F  +R +  +      N  T   +L ACL    +   ++ HG 
Sbjct: 382 WNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGY 441

Query: 268 ALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDA 327
           +L+  ++    +  A +  Y K G +  A  +F  M  K V  W+ +I  +AQ    I A
Sbjct: 442 SLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKA 501

Query: 328 VELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDV 387
           ++ +  M +  + P+ F+ VS+L AC  +  L  G +IH  V+R GL  + FV+ +L+ +
Sbjct: 502 LDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSL 561

Query: 388 YAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTY 447
           Y  C +       F     +N V WN M+ GY Q     +A+ +F +ML + +   E+  
Sbjct: 562 YFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAI 621

Query: 448 SSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND 507
           +S+L AC+ L+AL  G +VHC  +K +   D  VA +L+DMYAK G +  ++ +F+ +N 
Sbjct: 622 ASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNG 681

Query: 508 WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAY 567
               SWN MI+G+ +HG   + +++F+ M++   +P+  TF+GVL AC + GL+ +G  Y
Sbjct: 682 KEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNY 741

Query: 568 FKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
              M   Y +EP +EHY  ++ +LGRAG L++A   I  +P +P   IW +LL + I + 
Sbjct: 742 LAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYV 801

Query: 628 NVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEK-----------AASKEPGLSWI 676
           ++E+G   A+ +L  E     +++LLSN+YA A  W+            +  K+ G SWI
Sbjct: 802 DLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWI 861

Query: 677 ENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWV 736
           E +G V+ F AG+ S+   + IR M   L  +  + GY PD S VL ++ E EK + L  
Sbjct: 862 ELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKILKG 921

Query: 737 HSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQD 796
           HSEK+A+ F        + +RI KNLRIC DCH A K ISK  +REI+IRD  RFHHF+ 
Sbjct: 922 HSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFKK 981

Query: 797 GCCSCGDFW 805
           G CSCGD+W
Sbjct: 982 GICSCGDYW 990



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 127/393 (32%), Positives = 219/393 (55%), Gaps = 21/393 (5%)

Query: 194 VGTALIDAFSVCGCVEFARKVFDGLFN----------------DCFEEALNFFSQMRAVG 237
           + T LI  +S+CG    +R VFD L N                + ++EA++ F ++ +V 
Sbjct: 145 LNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVT 204

Query: 238 -FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNA 296
            F+P+NFTF  ++KAC G   I + KS HG A+K    MDL+V  A++ LY K G +  A
Sbjct: 205 EFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEA 264

Query: 297 RRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA--FVAPNQFTFVSVLQACA 354
             +F++MP++++I W+ +I  +++    ++A   F  + ++   + P+  T V++L  C+
Sbjct: 265 VELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCS 324

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
               +D+G  IH + V++GL+ ++ V NAL+D+Y+KCG +  +  LF +   ++ V+WN+
Sbjct: 325 GEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNS 384

Query: 415 MIVGYVQLGEVGKAMIMFSKML--EEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
           MI  Y + G V +   +  KM   EE +   EVT  ++L AC   + L     +H  +++
Sbjct: 385 MIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLR 444

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
            ++    ++ NA I  YAKCGS+  A  VF  MN  +  SWNA+I G++ +G   + L  
Sbjct: 445 HSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDF 504

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE 565
           +  M + G  P++ + V +L AC   GLL+ G+
Sbjct: 505 YFEMTRLGILPDDFSIVSLLLACGRLGLLQYGK 537



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 137/526 (26%), Positives = 228/526 (43%), Gaps = 24/526 (4%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL-FDEMPERN 121
           LQ C Q  +++    +   +         F  N  L     +   P  ++L FD +  +N
Sbjct: 114 LQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKN 173

Query: 122 TISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNP--FAFTAFLKVLVSMGWAELCPCV 179
              +   + GY  +  + EA+  F  L     E  P  F F   +K         L   V
Sbjct: 174 LFQWNALVSGYVRNELYDEAIHTFLELISV-TEFQPDNFTFPCLIKACTGKCDIHLGKSV 232

Query: 180 FACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCF 223
                K+G   + FVG A+I  +  CG ++ A ++FD +                 N  +
Sbjct: 233 HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFW 292

Query: 224 EEALNFFSQM--RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
            EA   F  +     G  P+  T   +L  C G   + V    HG A+K     +L V  
Sbjct: 293 LEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCN 352

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR--MRQAFV 339
           AL+D+Y+K G +S A  +F ++  K V+ W+ MI  Y++     +  +L  +  M +  +
Sbjct: 353 ALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELM 412

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
             N+ T +++L AC     L     +H   +R        ++NA +  YAKCG +  +  
Sbjct: 413 EVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEH 472

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +F     ++  +WN +I G+ Q G+  KA+  + +M    +   + +  S+L AC  L  
Sbjct: 473 VFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGL 532

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
           L+ G ++H   ++   +M+  VA +L+ +Y  C      R  F+ M D N V WNAM+SG
Sbjct: 533 LQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSG 592

Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE 565
           YS + L  E L +F  M   G  P+ +    +L ACS    L  G+
Sbjct: 593 YSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGK 638



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 190/360 (52%), Gaps = 23/360 (6%)

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
           D  +   L+ +Y+  G    +R +F+ +  K++  W+ +++ Y + +L  +A+  F  + 
Sbjct: 142 DFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELI 201

Query: 336 QAF-VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
                 P+ FTF  +++AC     + LG  +H + V++GL+ D+FV NA++ +Y KCG +
Sbjct: 202 SVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFL 261

Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ---VPATEVTYSSVL 451
           + +VELF + P++N ++WN++I G+ + G   +A   F  +LE     +P    T  ++L
Sbjct: 262 DEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDV-ATMVTLL 320

Query: 452 RACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEV 511
             C+    ++ GM +H + VK     +++V NALIDMY+KCG +++A ++F  + + + V
Sbjct: 321 PVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVV 380

Query: 512 SWNAMISGYSMHGLSAEVLKVFDL-----MQQRGWRPNNLTFVGVLSACSNGGLLEQGEA 566
           SWN+MI  YS  G    V + FDL     M++     N +T + +L AC     LE+ E 
Sbjct: 381 SWNSMIGAYSREGF---VFETFDLLRKMWMEEELMEVNEVTILNLLPAC-----LEESEL 432

Query: 567 YFKSMVANYGIEPCIEHY----TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
                +  Y +    ++      + ++   + G L  A  +  G+  + SV  W A++G 
Sbjct: 433 LSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTK-SVSSWNAVIGG 491



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 94/173 (54%), Gaps = 4/173 (2%)

Query: 450 VLRACASLAALEPGMQV-HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDW 508
           +L+ C     +E G ++   L V + +  D V+   LI MY+ CG   ++RLVFD + + 
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK 172

Query: 509 NEVSWNAMISGYSMHGLSAEVLKVF-DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAY 567
           N   WNA++SGY  + L  E +  F +L+    ++P+N TF  ++ AC+    +  G++ 
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKS- 231

Query: 568 FKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
              M    G+   +    +M++L G+ G LD+A +L + +P Q +++ W +L+
Sbjct: 232 VHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQ-NLISWNSLI 283


>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Glycine max]
          Length = 676

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 249/645 (38%), Positives = 376/645 (58%), Gaps = 30/645 (4%)

Query: 190 SNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF---------EEALNFFSQM 233
           S +F+G  LID +  CG +  ARK+FD L       +N            +EA+ F+  M
Sbjct: 33  SYSFLGHKLIDGYIKCGSLAEARKLFDELPSRHIVTWNSMISSHISHGKSKEAVEFYGNM 92

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE-MDLYVAVALLDLYTKSGE 292
              G  P+ +TF+ + KA   L  IR  + AHG A+    E +D +VA AL+D+Y K  +
Sbjct: 93  LMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFVASALVDMYAKFDK 152

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           + +A  +F  + +KDV+ ++ +I  YAQ  L  +A+++F  M    V PN++T   +L  
Sbjct: 153 MRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVNRGVKPNEYTLACILIN 212

Query: 353 CATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTW 412
           C  +  L  G  IH LVV+ GL S V    +L+ +Y++C  +E+S+++F +    N VTW
Sbjct: 213 CGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTW 272

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
            + +VG VQ G    A+ +F +M+   +     T SS+L+AC+SLA LE G Q+H +T+K
Sbjct: 273 TSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAMLEVGEQIHAITMK 332

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
              D +     ALI++Y KCG++  AR VFD++ + + V+ N+MI  Y+ +G   E L++
Sbjct: 333 LGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDVVAINSMIYAYAQNGFGHEALEL 392

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
           F+ ++  G  PN +TF+ +L AC+N GL+E+G   F S+  N+ IE  I+H+T M+ LLG
Sbjct: 393 FERLKNMGLVPNGVTFISILLACNNAGLVEEGCQIFASIRNNHNIELTIDHFTCMIDLLG 452

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVL 652
           R+  L++AA LIE +   P V++WR LL +C IH  VE+       IL+  P D  TH+L
Sbjct: 453 RSRRLEEAAMLIEEVR-NPDVVLWRTLLNSCKIHGEVEMAEKVMSKILELAPGDGGTHIL 511

Query: 653 LSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGM 701
           L+N+YA A  W +              K P +SW++    VH F AGD SH     I  M
Sbjct: 512 LTNLYASAGKWNQVIEMKSTIRDLKLKKSPAMSWVDVDREVHTFMAGDLSHPRSLEIFEM 571

Query: 702 LEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFK-MPPSSPIRIIK 760
           L  L  K +  GY P+   VL+D+ E++K   L+ HSEKLA+A+AL+K +  ++ IRI K
Sbjct: 572 LHGLMKKVKTLGYNPNTRFVLQDLDEEKKISSLYYHSEKLAIAYALWKTIGRTTTIRIFK 631

Query: 761 NLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           NLR+C DCH+ IK +S +  R+II RD  RFHHF+ G CSC D+W
Sbjct: 632 NLRVCGDCHSWIKFVSLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 119/485 (24%), Positives = 235/485 (48%), Gaps = 21/485 (4%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           Y++ +        L T   +H  V+K G     F  + L++ Y+K   L +A KLFDE+P
Sbjct: 4   YSSLIAQSAHTKSLTTLRAVHTNVIKSGFSYS-FLGHKLIDGYIKCGSLAEARKLFDELP 62

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
            R+ +++ + I  +    +  EAV  +  +  EG   + + F+A  K    +G       
Sbjct: 63  SRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQR 122

Query: 179 VFACVYKLGHDS-NAFVGTALIDAFSVCGCVEFARKVFDGLF----------------ND 221
                  LG +  + FV +AL+D ++    +  A  VF  +                 + 
Sbjct: 123 AHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHG 182

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
              EAL  F  M   G KPN +T A +L  C  L  +   +  HG  +K+  E  +    
Sbjct: 183 LDGEALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQT 242

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           +LL +Y++   I ++ ++F ++   + + W+  +    Q      AV +F  M +  ++P
Sbjct: 243 SLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISP 302

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           N FT  S+LQAC+++  L++G QIH++ +++GL  + +   AL+++Y KCG M+ +  +F
Sbjct: 303 NPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVF 362

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
               + + V  N+MI  Y Q G   +A+ +F ++    +    VT+ S+L AC +   +E
Sbjct: 363 DVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLVE 422

Query: 462 PGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
            G Q+   +++ N+++++ + +   +ID+  +   + +A ++ + + + + V W  +++ 
Sbjct: 423 EGCQIFA-SIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVRNPDVVLWRTLLNS 481

Query: 520 YSMHG 524
             +HG
Sbjct: 482 CKIHG 486



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/311 (25%), Positives = 136/311 (43%), Gaps = 35/311 (11%)

Query: 27  GLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKG 86
           GL  +A    +   N    P        N ++ A  L +C    DL     IH  V+K G
Sbjct: 182 GLDGEALKIFEDMVNRGVKP--------NEYTLACILINCGNLGDLVNGQLIHGLVVKSG 233

Query: 87  NCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFS 146
               + +   LL +Y + N + D+ K+F+++   N +++ + + G   + +   AV +F 
Sbjct: 234 LESVVASQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFR 293

Query: 147 TLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCG 206
            + R     NPF  ++ L+   S+   E+   + A   KLG D N + G ALI+ +  CG
Sbjct: 294 EMIRCSISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCG 353

Query: 207 CVEFARKVFDGLF----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLK 250
            ++ AR VFD L                 N    EAL  F +++ +G  PN  TF  +L 
Sbjct: 354 NMDKARSVFDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILL 413

Query: 251 ACLGLDTIRVAKSAHGC----ALKTCYEMDLYVA--VALLDLYTKSGEISNARRIFEEMP 304
           AC     +       GC    +++  + ++L +     ++DL  +S  +  A  + EE+ 
Sbjct: 414 ACNNAGLVE-----EGCQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVR 468

Query: 305 KKDVIPWSFMI 315
             DV+ W  ++
Sbjct: 469 NPDVVLWRTLL 479


>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930 [Vitis vinifera]
          Length = 724

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 239/658 (36%), Positives = 366/658 (55%), Gaps = 58/658 (8%)

Query: 206 GCVEFARKVFDGL-------FND---------CFEEALNFFSQMRAVGFKPNNFTFAFVL 249
           G +E+AR VFD +       +N+         C   A++ + +M   G  P+ +T+ F+L
Sbjct: 67  GDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLL 126

Query: 250 KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
           K       ++  +  H   +K  +  +++V  AL+ LY+ SGE+S AR +F+   K DV+
Sbjct: 127 KRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVV 186

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
            W+ MI+ Y ++    ++++LF  M +  V P+  T VSVL AC+ ++ L++G ++H  V
Sbjct: 187 TWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYV 246

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAM 429
             + +     + NAL+D+YA CG M+ ++ +F     R+ ++W  ++ G+  LG+VG A 
Sbjct: 247 KDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLAR 306

Query: 430 IMFSKMLEE-------------------------------QVPATEVTYSSVLRACASLA 458
             F KM E                                 +   E T  S+L ACA L 
Sbjct: 307 NYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLG 366

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           ALE G  +     K    +D  V NALIDMY  CG++  A  +F+ M   +++SW A+I 
Sbjct: 367 ALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIF 426

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           G +++G   E L +F  M +    P+ +T +GVL AC++ G++++G+ +F  M   +GIE
Sbjct: 427 GLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIE 486

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P + HY  MV LLGRAGHL +A ++I+ +P +P+ ++W +LLGAC +H + E+  ++AQ 
Sbjct: 487 PNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQ 546

Query: 639 ILDFEPEDEATHVLLSNIYAMARSWEK-----------AASKEPGLSWIENQGMVHYFRA 687
           IL+ EPE+ A +VLL NIYA    WEK              K PG S IE  G VH F A
Sbjct: 547 ILELEPENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVA 606

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFAL 747
           GD  H     I   L+ +++  + AGY PD S V  D+ E+EKE  ++ HSEKLA+AF L
Sbjct: 607 GDQVHPQSKEIYSKLDEMSVDLKFAGYSPDTSEVFLDIGEEEKESAVYRHSEKLAIAFGL 666

Query: 748 FKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
               P   IRI+KNLR+CVDCH   K++SK+  RE+I+RD  RFHHF+ G CSC D+W
Sbjct: 667 ISSGPGVTIRIVKNLRMCVDCHYVAKLVSKVYNREVIVRDRTRFHHFRHGSCSCKDYW 724



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/470 (26%), Positives = 214/470 (45%), Gaps = 49/470 (10%)

Query: 103 KLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTA 162
           +L  +  A  +FD MP  N   +   I+GY+       AV ++  +   G   + + +  
Sbjct: 65  ELGDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPF 124

Query: 163 FLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD------ 216
            LK        +    +   + KLG  SN FV  ALI  +S+ G V  AR VFD      
Sbjct: 125 LLKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGD 184

Query: 217 --------GLFNDC--FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHG 266
                     +N    F+E++  F +M  +   P++ T   VL AC  L  + V K  H 
Sbjct: 185 VVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHR 244

Query: 267 CA--LK----------------TCYEMDLYVAV-------------ALLDLYTKSGEISN 295
               LK                 C +MD  + +             A++  +T  G++  
Sbjct: 245 YVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGL 304

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACAT 355
           AR  F++MP++D + W+ MI  Y Q +   + + LF  M+ A + P++FT VS+L ACA 
Sbjct: 305 ARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAH 364

Query: 356 MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTM 415
           +  L+LG  I + + +  +  D FV NAL+D+Y  CG +E ++ +F   P R+ ++W  +
Sbjct: 365 LGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAV 424

Query: 416 IVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHC-LTVKAN 474
           I G    G   +A+ MFS+ML+  +   EVT   VL AC     ++ G +    +T +  
Sbjct: 425 IFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHG 484

Query: 475 YDMDVVVANALIDMYAKCGSITDARLVF-DMMNDWNEVSWNAMISGYSMH 523
            + +V     ++D+  + G + +A  V  +M    N + W +++    +H
Sbjct: 485 IEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVH 534



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 91/411 (22%), Positives = 176/411 (42%), Gaps = 49/411 (11%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           + ++Y   L+   ++  ++    +H  ++K G   ++F  N L+++Y     +  A  +F
Sbjct: 118 DEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVF 177

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D   + + +++   I GY  S QF E++ LF  + R     +     + L     +    
Sbjct: 178 DRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLN 237

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GLF 219
           +   V   V  L  +    +  ALID ++ CG ++ A  +FD               G  
Sbjct: 238 VGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFT 297

Query: 220 N--------------------------------DCFEEALNFFSQMRAVGFKPNNFTFAF 247
           N                                + F+E L+ F +M+A   KP+ FT   
Sbjct: 298 NLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVS 357

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
           +L AC  L  + + +       K   ++D +V  AL+D+Y   G +  A RIF  MP +D
Sbjct: 358 ILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRD 417

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
            I W+ +I   A      +A+++F +M +A + P++ T + VL AC     +D G +  +
Sbjct: 418 KISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFA 477

Query: 368 -LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMI 416
            +  + G+  +V     ++D+  + G ++ + E+    P K N + W +++
Sbjct: 478 RMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLL 528



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 118/265 (44%), Gaps = 24/265 (9%)

Query: 71  DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQ 130
           D+ TA+ I   +  +    D+ +   ++  +  L ++  A   FD+MPER+ +S+   I 
Sbjct: 270 DMDTALGIFDNMKSR----DVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMID 325

Query: 131 GYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDS 190
           GY   ++F E + LF  +     + + F   + L     +G  EL   + A + K     
Sbjct: 326 GYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKI 385

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMR 234
           ++FVG ALID +  CG VE A ++F+ +                 N   EEAL+ FSQM 
Sbjct: 386 DSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQML 445

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA--VALLDLYTKSGE 292
                P+  T   VL AC     +   K      + T + ++  VA    ++DL  ++G 
Sbjct: 446 KASITPDEVTCIGVLCACTHSGMVDKGKKFFA-RMTTQHGIEPNVAHYGCMVDLLGRAGH 504

Query: 293 ISNARRIFEEMP-KKDVIPWSFMIA 316
           +  A  + + MP K + I W  ++ 
Sbjct: 505 LKEAHEVIKNMPVKPNSIVWGSLLG 529


>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Glycine max]
          Length = 986

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 292/881 (33%), Positives = 441/881 (50%), Gaps = 106/881 (12%)

Query: 13  KQLTHQSK--INAWLRGLSAQAALSTQQCSNS-----TTTPITFSVSEFNSHSYATSLQS 65
           +QL H+ +  I+  LR    ++ L   Q +N+      T PIT             +L+ 
Sbjct: 124 QQLHHRYRCSISMLLRCFPIKSKLLQSQFTNTRLLSCATIPIT-------------ALKE 170

Query: 66  CIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISF 125
           C   + L  A  +H Q + +G    L ATN L+  Y+  N    A  L + +P   +  F
Sbjct: 171 C---NSLAHAKLLHQQSIMQGLLFHL-ATN-LIGTYIASNSTAYAILLLERLPPSPSSVF 225

Query: 126 --VTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACV 183
                I+         +   L+  +   G   + + F    K   ++    L   + A V
Sbjct: 226 WWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATV 285

Query: 184 YKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEE------------------ 225
            + G  SN FV  A++  +  CG +  A  +FD L +   ++                  
Sbjct: 286 SRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDAN 345

Query: 226 -ALNFFSQMRAVGF-KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
            AL  F +M       P+  +   +L AC  L      +  HG ++++    D++V  A+
Sbjct: 346 TALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAV 405

Query: 284 LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA--- 340
           +D+Y K G++  A ++F+ M  KDV+ W+ M+  Y+Q      A+ LF RM +  +    
Sbjct: 406 VDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDV 465

Query: 341 --------------------------------PNQFTFVSVLQACATMEGLDLGNQIHSL 368
                                           PN  T VS+L AC ++  L  G + H  
Sbjct: 466 VTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCY 525

Query: 369 VVRVGL--------LSDVFVSNALMDVYAKCGRMENSVELF-AESPK-RNHVTWNTMIVG 418
            ++  L          D+ V N L+D+YAKC   E + ++F + SPK R+ VTW  MI G
Sbjct: 526 AIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGG 585

Query: 419 YVQLGEVGKAMIMFSKM--LEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY- 475
           Y Q G+   A+ +FS M  +++ +   + T S  L ACA LAAL  G QVH   ++  Y 
Sbjct: 586 YAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYG 645

Query: 476 DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDL 535
            + + VAN LIDMY+K G +  A++VFD M   N VSW ++++GY MHG   + L+VFD 
Sbjct: 646 SVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDE 705

Query: 536 MQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAG 595
           M++    P+ +TF+ VL ACS+ G+++ G  +F  M  ++G++P  EHY  MV L GRAG
Sbjct: 706 MRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAG 765

Query: 596 HLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSN 655
            L +A KLI  +P +P+ ++W ALL AC +H+NVE+G  +A  +L+ E  ++ ++ LLSN
Sbjct: 766 RLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELESGNDGSYTLLSN 825

Query: 656 IYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEW 704
           IYA AR W+  A            K PG SWI+ +  V  F  GD SH     I   L  
Sbjct: 826 IYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVATFYVGDRSHPQSQQIYETLAD 885

Query: 705 LNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRI 764
           L  + +  GY+P  S  L DV ++EK   L+ HSEKLALA+ +  + P +PIRI KNLRI
Sbjct: 886 LIQRIKAIGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILTLHPRAPIRITKNLRI 945

Query: 765 CVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           C DCH+AI  ISKI++ EII+RD  RFHHF++G CSC  +W
Sbjct: 946 CGDCHSAITYISKIIEHEIILRDSSRFHHFKNGSCSCKGYW 986


>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
          Length = 755

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 269/765 (35%), Positives = 401/765 (52%), Gaps = 95/765 (12%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           ++  +N  +  +++  R+ DA +LF  MP R+T ++   + GY+ + +   A  LF  + 
Sbjct: 37  EVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP 96

Query: 150 REGHELNPFAFTAFLKVLV-------SMGWAELCPCVFACVYKLGHDSNAFVGTALIDAF 202
           R     + +++   L  L        + G  +  P   +  Y +           +I + 
Sbjct: 97  RP----DNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNV-----------MISSH 141

Query: 203 SVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAK 262
           +  G V  AR  FD               +  AV +  N    A+V          RV +
Sbjct: 142 ANHGLVSLARHYFD------------LAPEKDAVSW--NGMLAAYVRNG-------RV-E 179

Query: 263 SAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTD 322
            A G    +  E D     AL+  Y + G++S AR +F+ MP +DV+ W+ M++ YA+  
Sbjct: 180 EARGL-FNSRTEWDAISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRG 238

Query: 323 LSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSN 382
             ++A  LF     A    + FT+ +V+   A    L+   ++   +     +S     N
Sbjct: 239 DMVEARRLF----DAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVS----WN 290

Query: 383 ALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE---- 438
           A++  Y +   M+ + ELF   P RN  +WNTM+ GY Q G + +A  +F  M ++    
Sbjct: 291 AMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVS 350

Query: 439 ---------QVPATEVT------------------YSSVLRACASLAALEPGMQVHCLTV 471
                    Q   +E T                  ++ VL  CA +AALE GMQ+H   +
Sbjct: 351 WAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLI 410

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
           +A Y +   V NAL+ MY KCG++ DAR  F+ M + + VSWN MI+GY+ HG   E L+
Sbjct: 411 RAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALE 470

Query: 532 VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLL 591
           +FD+M+    +P+++T VGVL+ACS+ GL+E+G +YF SM  ++G+    EHYT M+ LL
Sbjct: 471 IFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLL 530

Query: 592 GRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHV 651
           GRAG L +A  L++ +PF+P   +W ALLGA  IH N E+GR +A+ I + EPE+   +V
Sbjct: 531 GRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYV 590

Query: 652 LLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRG 700
           LLSNIYA +  W           E+   K PG SWIE Q  VH F AGD  H +   I  
Sbjct: 591 LLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYA 650

Query: 701 MLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIK 760
            LE L+M+ +KAGY+     VL DV E+EKE  L  HSEKLA+A+ +  +PP  PIR+IK
Sbjct: 651 FLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIK 710

Query: 761 NLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           NLR+C DCH A K IS I  R I++RD +RFHHF+ G CSCGD+W
Sbjct: 711 NLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 103/252 (40%), Gaps = 28/252 (11%)

Query: 88  CLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFST 147
           C ++ + N +L  Y +   L +A  +FD MP+++ +S+   +  Y+      E + LF  
Sbjct: 314 CRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIE 373

Query: 148 LHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGC 207
           + R G  +N  AF   L     +   E    +   + + G+    FVG AL+  +  CG 
Sbjct: 374 MGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGN 433

Query: 208 VEFARKVFD---------------GLFNDCF-EEALNFFSQMRAVGFKPNNFTFAFVLKA 251
           +E AR  F+               G     F +EAL  F  MR    KP++ T   VL A
Sbjct: 434 MEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAA 493

Query: 252 CLGLDTIRVAKSAHGCALKTCYEMDLYVAVA------LLDLYTKSGEISNARRIFEEMP- 304
           C     +       G +       D  V         ++DL  ++G ++ A  + ++MP 
Sbjct: 494 CSHSGLVE-----KGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPF 548

Query: 305 KKDVIPWSFMIA 316
           + D   W  ++ 
Sbjct: 549 EPDSTMWGALLG 560



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 60/261 (22%), Positives = 103/261 (39%), Gaps = 32/261 (12%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  ++A  L +C     L+  M +H ++++ G  +  F  N LL +Y K   + DA   F
Sbjct: 382 NRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAF 441

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           +EM ER+ +S+ T I GY       EA+ +F  +     + +       L      G  E
Sbjct: 442 EEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVE 501

Query: 175 LCPCVFACVYKLGHDSNAFVG----TALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFF 230
                F   Y + HD          T +ID     G +  A  +                
Sbjct: 502 KGISYF---YSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDL---------------- 542

Query: 231 SQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA---VALLDLY 287
             M+ + F+P++  +     A LG   I         A +  +E++   A   V L ++Y
Sbjct: 543 --MKDMPFEPDSTMWG----ALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIY 596

Query: 288 TKSGEISNARRIFEEMPKKDV 308
             SG+  +AR++   M ++ V
Sbjct: 597 ASSGKWRDARKMRVMMEERGV 617


>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g03880, mitochondrial; Flags: Precursor
 gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 228/540 (42%), Positives = 335/540 (62%), Gaps = 16/540 (2%)

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           +++   L+++Y K   +++A ++F++MP+++VI W+ MI+ Y++  +   A+EL   M +
Sbjct: 96  MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             V PN +T+ SVL++C  M  + +   +H  +++ GL SDVFV +AL+DV+AK G  E+
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPED 212

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           ++ +F E    + + WN++I G+ Q      A+ +F +M      A + T +SVLRAC  
Sbjct: 213 ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTG 272

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           LA LE GMQ H   VK  YD D+++ NAL+DMY KCGS+ DA  VF+ M + + ++W+ M
Sbjct: 273 LALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTM 330

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           ISG + +G S E LK+F+ M+  G +PN +T VGVL ACS+ GLLE G  YF+SM   YG
Sbjct: 331 ISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYG 390

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
           I+P  EHY  M+ LLG+AG LD A KL+  +  +P  + WR LLGAC +  N+ +   +A
Sbjct: 391 IDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAA 450

Query: 637 QHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYF 685
           + ++  +PED  T+ LLSNIYA ++ W           ++   KEPG SWIE    +H F
Sbjct: 451 KKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAF 510

Query: 686 RAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAF 745
             GD SH  +  +   L  L  +    GY+P+ + VL+D+  ++ E  L  HSEKLALAF
Sbjct: 511 IIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAF 570

Query: 746 ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            L  +P    IRI KNLRIC DCH   K+ SK+  R I+IRD  R+HHFQDG CSCGD+W
Sbjct: 571 GLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 121/380 (31%), Positives = 193/380 (50%), Gaps = 23/380 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +S +Y+  ++ CI N  +     I   +   G+   +F  NVL+N+YVK N L DA +LF
Sbjct: 60  DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D+MP+RN IS+ T I  Y+      +A+ L   + R+    N + +++ L+    M    
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVR 179

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
           +  C    + K G +S+ FV +ALID F+  G  E A  VFD +                
Sbjct: 180 MLHC---GIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFA 236

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            N   + AL  F +M+  GF     T   VL+AC GL  + +   AH   +K  Y+ DL 
Sbjct: 237 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLI 294

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           +  AL+D+Y K G + +A R+F +M ++DVI WS MI+  AQ   S +A++LF RM+ + 
Sbjct: 295 LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSG 354

Query: 339 VAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
             PN  T V VL AC+    L+ G     S+    G+         ++D+  K G+++++
Sbjct: 355 TKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDA 414

Query: 398 VELFAESP-KRNHVTWNTMI 416
           V+L  E   + + VTW T++
Sbjct: 415 VKLLNEMECEPDAVTWRTLL 434



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 13/203 (6%)

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV-VA 482
           ++ +AM     +    + A   TYS +++ C S  A+  G  + C  +  N    ++ + 
Sbjct: 41  DLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLI-CRHLYFNGHRPMMFLV 99

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
           N LI+MY K   + DA  +FD M   N +SW  MIS YS   +  + L++  LM +   R
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159

Query: 543 PNNLTFVGVLSAC---SNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDK 599
           PN  T+  VL +C   S+  +L  G       +   G+E  +   ++++ +  + G  + 
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRMLHCG-------IIKEGLESDVFVRSALIDVFAKLGEPED 212

Query: 600 AAKLIEGIPFQPSVMIWRALLGA 622
           A  + + +      ++W +++G 
Sbjct: 213 ALSVFDEM-VTGDAIVWNSIIGG 234


>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
          Length = 787

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 253/643 (39%), Positives = 369/643 (57%), Gaps = 31/643 (4%)

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFDG-------LFNDCF-----EEALNFFSQMRAVG- 237
           + FV +AL   + V   V+ ARKVFD        L+N         EA+  F++M   G 
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGSEAVESFARMVCDGS 207

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR 297
            +P+  T A VL A   +  + + +  H  A K       +V   L+ LY+K G++ +AR
Sbjct: 208 VRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESAR 267

Query: 298 RIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATME 357
            +F+ M K D++ ++ +I+ Y+   +   +V LF  +    + PN  T V+++   +   
Sbjct: 268 CLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPF- 326

Query: 358 GLDLGNQ-IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMI 416
           G DL  Q +H  V++ G  ++  VS A+  ++ +   ME++ + F   P++   +WN MI
Sbjct: 327 GHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMI 386

Query: 417 VGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD 476
            GY Q G    A+ +F +M++  V    +T SS L ACA L AL  G  +H +  + + +
Sbjct: 387 SGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLE 446

Query: 477 MDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLM 536
            +V V  ALIDMYAKCGSI++AR +F+ M++ N VSWNAMI+GY +HG  AE LK++  M
Sbjct: 447 PNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDM 506

Query: 537 QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGH 596
                 P + TF+ VL ACS+GGL+E+G   F+SM  +Y I P IEH T MV LLGRAG 
Sbjct: 507 LDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQ 566

Query: 597 LDKAAKLIEGIP---FQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLL 653
           L +A +LI   P     P V  W ALLGAC++H + ++ +L++Q + + +PE+   +VLL
Sbjct: 567 LKEAFELISEFPKSAVGPGV--WGALLGACMVHKDSDLAKLASQKLFELDPENSGYYVLL 624

Query: 654 SNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGML 702
           SN++   + + +AA            K PG + IE     H F AGD +H     I   L
Sbjct: 625 SNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAHPQSEAIYSYL 684

Query: 703 EWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNL 762
           E L  K  +AGY P+  A L DV E+EKE  + VHSEKLA+AF L    P + IRIIKNL
Sbjct: 685 EKLTAKMIEAGYRPETEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIRIIKNL 744

Query: 763 RICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           R+C+DCH A K ISK+ QR I++RD  RFHHF+DG CSCGD+W
Sbjct: 745 RVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 129/458 (28%), Positives = 226/458 (49%), Gaps = 32/458 (6%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D F  + L  +Y  L+R+  A K+FD +P  +T+ + T + G + S    EAV  F+ + 
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGS----EAVESFARMV 203

Query: 150 REGHELNPFAFT--AFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGC 207
            +G  + P A T  + L     +    +  CV +   K G   +  V T LI  +S CG 
Sbjct: 204 CDG-SVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGD 262

Query: 208 VEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKA 251
           VE AR +FD +                 N     ++N F+++  +G  PN+ T   ++  
Sbjct: 263 VESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPV 322

Query: 252 CLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPW 311
                   +A+  HG  LK+ +  +  V+ A+  L+ +  ++ +AR+ F+ MP+K +  W
Sbjct: 323 HSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESW 382

Query: 312 SFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR 371
           + MI+ YAQ  L+  AV LF +M +  V PN  T  S L ACA +  L LG  +H ++  
Sbjct: 383 NAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITE 442

Query: 372 VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIM 431
             L  +V+V  AL+D+YAKCG +  +  +F     +N V+WN MI GY   G+  +A+ +
Sbjct: 443 EDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKL 502

Query: 432 FSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV-HCLTVKANYDMDVVVANALIDMYA 490
           +  ML+  +  T  T+ SVL AC+    +E G +V   +T     +  +     ++D+  
Sbjct: 503 YKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLG 562

Query: 491 KCGSITDARLVFDMMNDWNEVS-----WNAMISGYSMH 523
           + G + +A   F++++++ + +     W A++    +H
Sbjct: 563 RAGQLKEA---FELISEFPKSAVGPGVWGALLGACMVH 597



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 109/404 (26%), Positives = 179/404 (44%), Gaps = 27/404 (6%)

Query: 22  NAWLRGLSAQAALST--QQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIH 79
           N  L GLS   A+ +  +   + +  P        ++ + A+ L +  +  D+     +H
Sbjct: 184 NTLLAGLSGSEAVESFARMVCDGSVRP--------DATTLASVLPAAAEVADVTMGRCVH 235

Query: 80  CQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFV 139
               K G          L+++Y K   +  A  LFD M + + +++   I GY+V+    
Sbjct: 236 SFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVG 295

Query: 140 EAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALI 199
            +V LF+ L   G   N     A + V    G   L  C+   V K G  +N+ V TA+ 
Sbjct: 296 SSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAIT 355

Query: 200 DAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRAVGFKPNNF 243
                   +E ARK FD +                 N   E A+  F QM  +  +PN  
Sbjct: 356 TLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPI 415

Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
           T +  L AC  L  + + K  H    +   E ++YV  AL+D+Y K G IS ARRIF  M
Sbjct: 416 TISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTM 475

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
             K+V+ W+ MIA Y       +A++L+  M  A + P   TF+SVL AC+    ++ G 
Sbjct: 476 DNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGW 535

Query: 364 QI-HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
           ++  S+     +   +     ++D+  + G+++ + EL +E PK
Sbjct: 536 KVFRSMTDDYAINPGIEHCTCMVDLLGRAGQLKEAFELISEFPK 579



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 111/272 (40%), Gaps = 41/272 (15%)

Query: 75  AMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTV 134
           A  +H  VLK G   +   +  +  ++ +LN +  A K FD MPE+   S+   I GY  
Sbjct: 332 AQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQ 391

Query: 135 SSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFV 194
           +     AV LF  + +     NP   ++ L     +G   L   +   + +   + N +V
Sbjct: 392 NGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYV 451

Query: 195 GTALIDAFSVCGCVEFARKVFDGLFNDCF----------------EEALNFFSQMRAVGF 238
            TALID ++ CG +  AR++F+ + N                    EAL  +  M     
Sbjct: 452 MTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHL 511

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM-----DLYV-------AVALLDL 286
            P + TF  VL AC           +HG  ++  +++     D Y           ++DL
Sbjct: 512 LPTSATFLSVLYAC-----------SHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDL 560

Query: 287 YTKSGEISNARRIFEEMPKKDVIP--WSFMIA 316
             ++G++  A  +  E PK  V P  W  ++ 
Sbjct: 561 LGRAGQLKEAFELISEFPKSAVGPGVWGALLG 592


>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 785

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 272/828 (32%), Positives = 418/828 (50%), Gaps = 133/828 (16%)

Query: 56  SHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFD 115
           S  Y + LQ  ++  D  T  +IH +++K G  L +F  N L+N Y K   + DA ++FD
Sbjct: 13  SDPYTSFLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFD 72

Query: 116 EMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAEL 175
           EMP ++  S+   + GY    +  EA  +F  +                    S+ W   
Sbjct: 73  EMPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPD----------------SVSW--- 113

Query: 176 CPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRA 235
                               TA+I  ++  G                FE A+  F +M +
Sbjct: 114 --------------------TAMIVGYNQMGQ---------------FENAIGMFREMVS 138

Query: 236 VGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISN 295
               P  FT   VL +C  ++ + + +  H   +K      + VA +LL++Y KSG+   
Sbjct: 139 DDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVT 198

Query: 296 ARRIF-------------------------------EEMPKKDVIPWSFMIARYAQTDLS 324
           A+ +F                               E+M ++DV+ W+ MI+ Y Q    
Sbjct: 199 AKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFD 258

Query: 325 IDAVELFCRM-RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV----------G 373
            +A+++F +M   +   P++FT  S L ACA +E L LG QIH+ ++R            
Sbjct: 259 REALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNA 318

Query: 374 LLS-----------------------DVFVSNALMDVYAKCGRMENSVELFAESPKRNHV 410
           L+S                       DV    AL+D Y K G +  +  +F     R+ V
Sbjct: 319 LISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVV 378

Query: 411 TWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLT 470
            W  MIVGYVQ G    AM +F  M++E       T +++L   +SLA+L+ G Q+H   
Sbjct: 379 AWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASA 438

Query: 471 VKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDW--NEVSWNAMISGYSMHGLSAE 528
            ++     V V+NALI MYAK GSI DAR VF++++ W  + ++W +MI   + HGL  E
Sbjct: 439 TRSGNASSVSVSNALITMYAKSGSINDARWVFNLIH-WKRDTITWTSMIIALAQHGLGEE 497

Query: 529 VLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMV 588
            L +F+ M + G +P+++T+VGVLSAC++ GL+EQG +Y+  M   + I P   HY  M+
Sbjct: 498 ALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMI 557

Query: 589 SLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEA 648
            L GRAG L +A   IE +P +P V+ W +LL +C +H NVE+  ++A+ +L  EPE+  
Sbjct: 558 DLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSG 617

Query: 649 THVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNI 697
            +  L+N+Y+    WE AA+           K+ G SW++ +  VH F   D  H   + 
Sbjct: 618 AYSALANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQRDA 677

Query: 698 IRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIR 757
           I  M+  +  + +K G++PD  +VL D+ E+ KE+ L  HSEKLA+AF L   P ++ +R
Sbjct: 678 IYEMMAKIWKEIKKMGFVPDTESVLHDLEEELKEQILSHHSEKLAIAFGLICTPENTTLR 737

Query: 758 IIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           I+KNLR+C DCH+AIK ISK+V REII+RD  RFHHF++G CSC D+W
Sbjct: 738 IMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKNGLCSCRDYW 785



 Score = 40.4 bits (93), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 101/261 (38%), Gaps = 31/261 (11%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N+++ AT L        L     IH    + GN   +  +N L+ +Y K   + DA  +F
Sbjct: 411 NNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVF 470

Query: 115 DEMP-ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           + +  +R+TI++ + I          EA+ LF  +   G + +   +   L     +G  
Sbjct: 471 NLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLV 530

Query: 174 ELCPCVFACVYKLGHDSNAFVGTA-----LIDAFSVCGCVEFARKVFDGLFNDCFEEALN 228
           E         Y L  +++  + T      +ID F   G +               +EA  
Sbjct: 531 EQG----RSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLL---------------QEAHA 571

Query: 229 FFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAK-SAHGCALKTCYEMDLYVAVALLDLY 287
           F   M     +P+   +  +L +C     + +A+ +A    L        Y A+A  ++Y
Sbjct: 572 FIENMP---IEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSALA--NVY 626

Query: 288 TKSGEISNARRIFEEMPKKDV 308
           +  G+  NA  I + M  K V
Sbjct: 627 SACGQWENAANIRKSMKDKGV 647


>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Glycine max]
          Length = 676

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 238/598 (39%), Positives = 350/598 (58%), Gaps = 12/598 (2%)

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGL-DTIRVAKSAHGCALKTCYEMDLY 278
           ND F +A++ ++ MR  GF P+NFTF FVLKAC  L     V  S H   +KT ++ D++
Sbjct: 79  NDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVF 138

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V   L+ LY+K+G +++AR++F+E+P+K+V+ W+ +I  Y ++    +A+ LF  + +  
Sbjct: 139 VKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMG 198

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           + P+ FT V +L AC+ +  L  G  I   +   G + +VFV+ +L+D+YAKCG ME + 
Sbjct: 199 LRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEAR 258

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            +F    +++ V W+ +I GY   G   +A+ +F +M  E V         V  AC+ L 
Sbjct: 259 RVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLG 318

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           ALE G     L     +  + V+  ALID YAKCGS+  A+ VF  M   + V +NA+IS
Sbjct: 319 ALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVIS 378

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           G +M G       VF  M + G +P+  TFVG+L  C++ GL++ G  YF  M + + + 
Sbjct: 379 GLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVT 438

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P IEHY  MV L  RAG L +A  LI  +P + + ++W ALLG C +H + ++     + 
Sbjct: 439 PTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQ 498

Query: 639 ILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRA 687
           +++ EP +   +VLLSNIY+ +  W           +K   K PG SW+E  G+VH F  
Sbjct: 499 LIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDGVVHEFLV 558

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFAL 747
           GDTSH   + I   LE L    R+AGY P    VL DV E+EKE +L  HSEKLA+AFAL
Sbjct: 559 GDTSHPLSHKIYEKLESLFKDLREAGYNPTTEFVLFDVEEEEKEYFLGCHSEKLAVAFAL 618

Query: 748 FKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
                   IR++KNLR+C DCH AIK++SK+  REII+RD +RFHHF +G CSC D+W
Sbjct: 619 ISTGAKDVIRVVKNLRVCGDCHEAIKLVSKVTGREIIVRDNNRFHHFTEGSCSCRDYW 676



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 134/509 (26%), Positives = 248/509 (48%), Gaps = 26/509 (5%)

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
           L  A   HC +L+ G   D +  N+LL   +       AT +F + P  N   + T I+G
Sbjct: 16  LHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRG 75

Query: 132 YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG-WAELCPCVFACVYKLGHDS 190
              +  F +AV +++++ + G   + F F   LK    +  +  +   + + V K G D 
Sbjct: 76  MVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDW 135

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFDG----------------LFNDCFEEALNFFSQMR 234
           + FV T L+  +S  G +  ARKVFD                 + + CF EAL  F  + 
Sbjct: 136 DVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLL 195

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
            +G +P++FT   +L AC  +  +   +   G   ++    +++VA +L+D+Y K G + 
Sbjct: 196 EMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSME 255

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
            ARR+F+ M +KDV+ WS +I  YA   +  +A+++F  M++  V P+ +  V V  AC+
Sbjct: 256 EARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACS 315

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
            +  L+LGN    L+     LS+  +  AL+D YAKCG +  + E+F    +++ V +N 
Sbjct: 316 RLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNA 375

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
           +I G    G VG A  +F +M++  +     T+  +L  C     ++ G + +   + + 
Sbjct: 376 VISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHR-YFSGMSSV 434

Query: 475 YDMDVVVAN--ALIDMYAKCGSITDAR-LVFDMMNDWNEVSWNAMISGYSMHG---LSAE 528
           + +   + +   ++D+ A+ G + +A+ L+  M  + N + W A++ G  +H    L+  
Sbjct: 435 FSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAEH 494

Query: 529 VLKVFDLMQQRGWRPNNLTFVGVLSACSN 557
           VLK   L++   W   +   +  + + S+
Sbjct: 495 VLK--QLIELEPWNSGHYVLLSNIYSASH 521



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/363 (32%), Positives = 190/363 (52%), Gaps = 6/363 (1%)

Query: 249 LKACL--GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK 306
           LK C   GL ++  AK  H   L+     D Y+   LL           A  +F + P  
Sbjct: 5   LKKCFAWGLKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHP 64

Query: 307 DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG-LDLGNQI 365
           ++  ++ +I      D   DAV ++  MRQ   AP+ FTF  VL+AC  +     +G  +
Sbjct: 65  NIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSL 124

Query: 366 HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEV 425
           HSLV++ G   DVFV   L+ +Y+K G + ++ ++F E P++N V+W  +I GY++ G  
Sbjct: 125 HSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCF 184

Query: 426 GKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANAL 485
           G+A+ +F  +LE  +     T   +L AC+ +  L  G  +     ++    +V VA +L
Sbjct: 185 GEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSL 244

Query: 486 IDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNN 545
           +DMYAKCGS+ +AR VFD M + + V W+A+I GY+ +G+  E L VF  MQ+   RP+ 
Sbjct: 245 VDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDC 304

Query: 546 LTFVGVLSACSNGGLLEQGEAYFKSMVAN-YGIEPCIEHYTSMVSLLGRAGHLDKAAKLI 604
              VGV SACS  G LE G      M  + +   P +   T+++    + G + +A ++ 
Sbjct: 305 YAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLG--TALIDFYAKCGSVAQAKEVF 362

Query: 605 EGI 607
           +G+
Sbjct: 363 KGM 365



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 121/282 (42%), Gaps = 22/282 (7%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +S +    L +C +  DL +   I   + + G+  ++F    L+++Y K   + +A ++F
Sbjct: 202 DSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVF 261

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D M E++ + +   IQGY  +    EA+ +F  + RE    + +A          +G  E
Sbjct: 262 DGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALE 321

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-FNDC----------- 222
           L       +      SN  +GTALID ++ CG V  A++VF G+   DC           
Sbjct: 322 LGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLA 381

Query: 223 ----FEEALNFFSQMRAVGFKPNNFTFAFVLKACL--GL-DTIRVAKSAHGCALKTCYEM 275
                  A   F QM  VG +P+  TF  +L  C   GL D      S           +
Sbjct: 382 MCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTI 441

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
           + Y    ++DL  ++G +  A+ +   MP + + I W  ++ 
Sbjct: 442 EHY--GCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLG 481


>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
          Length = 941

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 255/815 (31%), Positives = 425/815 (52%), Gaps = 36/815 (4%)

Query: 21  INAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHC 80
           + A+L   SA  A+       ++  P     S  +  + A+ L++C    D +    +H 
Sbjct: 133 VGAYLSSGSAGEAMRVYGAMRASAAP----GSAPDGCTLASVLKACGAEGDGRCGGEVHG 188

Query: 81  QVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPE--RNTISFVTTIQGYTVSSQF 138
             +K G        N L+ +Y K   L  A ++F+ + +  R+  S+ + + G   + + 
Sbjct: 189 LAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRT 248

Query: 139 VEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTAL 198
           +EA+ LF  +   G  +N +   A L+V   +G   L   + A + K G + N     AL
Sbjct: 249 LEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELN-IQCNAL 307

Query: 199 IDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRAVGFKPNN 242
           +  ++  G V+ A +VF  +                 N  + EA++FF +M   GF+P++
Sbjct: 308 LVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDH 367

Query: 243 FTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEE 302
                +  A   L  +   +  H  A+K     DL V   L+D+Y K G I  + ++FE 
Sbjct: 368 ACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFES 427

Query: 303 MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG 362
           M  +D I W+ ++A +AQ+    +A+E+   +++  +  +     S+L+ C  ++ + L 
Sbjct: 428 MGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLL 487

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
            Q+H   +R GLL D+ + N L+D+Y +CG  ++S+ LF    K++ V+W +MI      
Sbjct: 488 KQVHCYAIRNGLL-DLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNN 546

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
           G +  A+ +F++M +  +    V   S+L A A L++L  G QVH   ++ N+ ++  V 
Sbjct: 547 GRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVV 606

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
           ++L+DMY+ CGS+  A  VF+     + V W AMI+   MHG   + + +F  M Q G  
Sbjct: 607 SSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLT 666

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           P++++F+ +L ACS+  L+E+G+ Y   MV+ Y ++P  EHY  +V +LGR+G  ++A +
Sbjct: 667 PDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYE 726

Query: 603 LIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARS 662
            I+ +P  P   +W ALLGAC +H N  +  ++A  +L+ EP++   ++L+SN++A    
Sbjct: 727 FIKTMPMDPKSAVWCALLGACRVHRNYGLAVVAANKLLELEPDNPGNYILVSNVFAEMGK 786

Query: 663 W-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGML-EWLNMKSR 710
           W           E+   K P  SWIE    +H F +GD  H D   I   L E   M  R
Sbjct: 787 WNNAKETRTRMAERGLRKNPACSWIEIGNNIHTFTSGDYCHRDSEAIHLKLSEITEMLRR 846

Query: 711 KAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHT 770
           + GY+ D   VL D  E+EK   L  HSE++A+AF L    P  PIRI KNLR+C DCH 
Sbjct: 847 EGGYVEDTRFVLHDTSEEEKIDMLHKHSERIAIAFGLISTRPGMPIRIAKNLRVCGDCHE 906

Query: 771 AIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
             K++SK+ +R+I++RD +RFHHF  G CSC DFW
Sbjct: 907 FTKLVSKLFERDIVVRDANRFHHFSGGSCSCEDFW 941



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 149/561 (26%), Positives = 272/561 (48%), Gaps = 27/561 (4%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D F    L+ +Y +  R+ DA +LF+ MP R   S+   +  Y  S    EA+ ++  + 
Sbjct: 94  DGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMR 153

Query: 150 RE---GHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCG 206
                G   +     + LK   + G       V     K+G D +  V  ALI  ++ CG
Sbjct: 154 ASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCG 213

Query: 207 CVEFARKVFDGLFND-------------CFE-----EALNFFSQMRAVGFKPNNFTFAFV 248
            ++ A +VF+ L  D             C +     EAL  F  M++ GF  N++T   V
Sbjct: 214 LLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAV 273

Query: 249 LKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDV 308
           L+ C  L  + + +  H   LK   E+++    ALL +Y K G + +A R+F ++ +KD 
Sbjct: 274 LQVCAELGLLSLGRELHAALLKCGSELNIQCN-ALLVMYAKYGRVDSALRVFGQIAEKDY 332

Query: 309 IPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSL 368
           I W+ M++ Y Q     +A++ F  M Q    P+    VS+  A   +  L+ G + H+ 
Sbjct: 333 ISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAY 392

Query: 369 VVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKA 428
            ++  L +D+ V N LMD+Y KCG +E S ++F     R+H++W T++  + Q     +A
Sbjct: 393 AIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEA 452

Query: 429 MIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDM 488
           + M  ++ +E +    +   S+L  C  L ++    QVHC  ++ N  +D+++ N LID+
Sbjct: 453 LEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIR-NGLLDLILENRLIDI 511

Query: 489 YAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTF 548
           Y +CG    +  +F  +   + VSW +MI+  + +G     + +F  MQ+   +P+++  
Sbjct: 512 YGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSVAL 571

Query: 549 VGVLSACSNGGLLEQGEAYFKSMV-ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGI 607
           V +L A +    L +G+     ++  N+ IE  +   +S+V +    G ++ A ++ E  
Sbjct: 572 VSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPV--VSSLVDMYSGCGSMNYAIRVFERA 629

Query: 608 PFQPSVMIWRALLGACIIHNN 628
             +  V++W A++ A  +H +
Sbjct: 630 KCK-DVVLWTAMINATGMHGH 649



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 132/476 (27%), Positives = 239/476 (50%), Gaps = 38/476 (7%)

Query: 186 LGHDSNAFVGTALIDAFSVCGCVEFARKVFDG----------------LFNDCFEEALNF 229
           L  D + F+ T L+  +  CG V+ AR++F+G                L +    EA+  
Sbjct: 89  LNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRV 148

Query: 230 FSQMRAV---GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           +  MRA    G  P+  T A VLKAC      R     HG A+K   +    VA AL+ +
Sbjct: 149 YGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGM 208

Query: 287 YTKSGEISNARRIFE--EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
           Y K G + +A R+FE  +   +DV  W+ +++   Q   +++A+ LF  M+ A    N +
Sbjct: 209 YAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSY 268

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVS-NALMDVYAKCGRMENSVELFAE 403
           T V+VLQ CA +  L LG ++H+ +++ G  S++ +  NAL+ +YAK GR+++++ +F +
Sbjct: 269 TSVAVLQVCAELGLLSLGRELHAALLKCG--SELNIQCNALLVMYAKYGRVDSALRVFGQ 326

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
             ++++++WN+M+  YVQ     +A+  F +ML+           S+  A   L+ L  G
Sbjct: 327 IAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNG 386

Query: 464 MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMH 523
            + H   +K     D+ V N L+DMY KCGSI  +  VF+ M   + +SW  +++ ++  
Sbjct: 387 REFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQS 446

Query: 524 GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSAC---SNGGLLEQGEAYFKSMVANYGIEPC 580
              +E L++   +Q+ G   +++    +L  C    +  LL+Q   Y    + N  ++  
Sbjct: 447 SRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCY---AIRNGLLDLI 503

Query: 581 IEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
           +E+   ++ + G  G  D +  L + +  +  ++ W +++  C   NN   GRL+ 
Sbjct: 504 LEN--RLIDIYGECGEFDHSLNLFQRVE-KKDIVSWTSMINCCT--NN---GRLNG 551



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/275 (32%), Positives = 146/275 (53%), Gaps = 12/275 (4%)

Query: 362 GNQIHSLVVRVGLLS---DVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           G Q+H+  V  G L+   D F++  L+ +Y +CGR++++  LF   P R   +WN ++  
Sbjct: 76  GRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGA 135

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATE---VTYSSVLRACASLAALEPGMQVHCLTVKANY 475
           Y+  G  G+AM ++  M     P +     T +SVL+AC +      G +VH L VK   
Sbjct: 136 YLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGL 195

Query: 476 DMDVVVANALIDMYAKCGSITDARLVFD-MMNDWNEV-SWNAMISGYSMHGLSAEVLKVF 533
           D   +VANALI MYAKCG +  A  VF+ +  D  +V SWN+++SG   +G + E L +F
Sbjct: 196 DKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALF 255

Query: 534 DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGR 593
             MQ  G+  N+ T V VL  C+  GLL  G     +++   G E  I+   +++ +  +
Sbjct: 256 RGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALL-KCGSELNIQ-CNALLVMYAK 313

Query: 594 AGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
            G +D A ++   I  +   + W ++L +C + N+
Sbjct: 314 YGRVDSALRVFGQIA-EKDYISWNSML-SCYVQNS 346



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 8/198 (4%)

Query: 434 KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA---NYDMDVVVANALIDMYA 490
           + L  + P     Y  VL   A+  A   G QVH   V     N D D  +A  L+ MY 
Sbjct: 47  RQLTTRAPPAREHYGWVLDLVAARRAAAEGRQVHAHAVTTGSLNEDDDGFLATKLVFMYG 106

Query: 491 KCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR---GWRPNNLT 547
           +CG + DAR +F+ M      SWNA++  Y   G + E ++V+  M+     G  P+  T
Sbjct: 107 RCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDGCT 166

Query: 548 FVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGI 607
              VL AC   G    G      +    G++       +++ +  + G LD A ++ E +
Sbjct: 167 LASVLKACGAEGDGRCG-GEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWL 225

Query: 608 PFQP-SVMIWRALLGACI 624
                 V  W +++  C+
Sbjct: 226 QQDARDVASWNSVVSGCV 243


>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 801

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 241/706 (34%), Positives = 379/706 (53%), Gaps = 29/706 (4%)

Query: 129 IQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGH 188
           I  Y  ++   +A  +++ +     E++ F   + LK    +    L   V   V K G 
Sbjct: 96  ITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGF 155

Query: 189 DSNAFVGTALIDAFSVCGCVEFARKVFDGLFND----------------CFEEALNFFSQ 232
             + FV  ALI  +S  G +  AR +FD + N                   +EAL+    
Sbjct: 156 HGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRD 215

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT--CYEMDLYVAVALLDLYTKS 290
           M  +  KP+      +      L  +++ K+ H   ++   C +  + +  AL+D+Y K 
Sbjct: 216 MHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKC 275

Query: 291 GEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVL 350
             ++ ARR+F+ + K  +I W+ MIA Y   +   + V LF +M    + PN+ T +S++
Sbjct: 276 ENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLV 335

Query: 351 QACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHV 410
           + C T   L+LG  +H+  +R G    + ++ A +D+Y KCG + ++  +F     ++ +
Sbjct: 336 KECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLM 395

Query: 411 TWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLT 470
            W+ MI  Y Q   + +A  +F  M    +   E T  S+L  CA   +LE G  +H   
Sbjct: 396 MWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYI 455

Query: 471 VKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVL 530
            K     D+++  + +DMYA CG I  A  +F    D +   WNAMISG++MHG     L
Sbjct: 456 DKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAAL 515

Query: 531 KVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSL 590
           ++F+ M+  G  PN++TF+G L ACS+ GLL++G+  F  MV  +G  P +EHY  MV L
Sbjct: 516 ELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDL 575

Query: 591 LGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATH 650
           LGRAG LD+A +LI+ +P +P++ ++ + L AC +H N+++G  +A+  L  EP     +
Sbjct: 576 LGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGYN 635

Query: 651 VLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIR 699
           VL+SNIYA A  W           ++   KEPG+S IE  G++H F  GD  H D   + 
Sbjct: 636 VLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGDREHPDAKKVY 695

Query: 700 GMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRII 759
            M++ +  K   AGY PD+S VL ++ +++K   L  HSEKLA+A+ L    P  PIRI+
Sbjct: 696 EMIDEMREKLEDAGYTPDVSCVLHNIDKEKKVSALNYHSEKLAMAYGLISTAPGVPIRIV 755

Query: 760 KNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           KNLR+C DCH A K++SKI  REII+RD +RFHHF++G CSC D+W
Sbjct: 756 KNLRVCDDCHNATKLLSKIYGREIIVRDRNRFHHFKEGSCSCCDYW 801



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 157/359 (43%), Gaps = 19/359 (5%)

Query: 71  DLQTAMTIHCQVLKKGNC--LDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTT 128
           DL+    +H  V++ G C    +     L+++YVK   L  A ++FD + + + IS+   
Sbjct: 240 DLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAM 299

Query: 129 IQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGH 188
           I  Y   +   E V LF  +  EG   N     + +K   + G  EL   + A   + G 
Sbjct: 300 IAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGF 359

Query: 189 DSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQ 232
             +  + TA ID +  CG V  AR VFD                   N+C +EA + F  
Sbjct: 360 TLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVH 419

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           M   G +PN  T   +L  C    ++ + K  H    K   + D+ +  + +D+Y   G+
Sbjct: 420 MTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGD 479

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           I  A R+F E   +D+  W+ MI+ +A       A+ELF  M    V PN  TF+  L A
Sbjct: 480 IDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHA 539

Query: 353 CATMEGLDLGNQI-HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHV 410
           C+    L  G ++ H +V   G    V     ++D+  + G ++ + EL    P R ++
Sbjct: 540 CSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNI 598



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 175/368 (47%), Gaps = 21/368 (5%)

Query: 265 HGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLS 324
           HG  +KT       V +A L+ Y+ +  I                  SF+I  Y + +  
Sbjct: 63  HGHFIKTSSNCSYRVPLAALESYSSNAAIH-----------------SFLITSYIKNNCP 105

Query: 325 IDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNAL 384
            DA +++  MR      + F   SVL+AC  +    LG ++H  VV+ G   DVFV NAL
Sbjct: 106 ADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNAL 165

Query: 385 MDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATE 444
           + +Y++ G +  +  LF +   ++ V+W+TMI  Y + G + +A+ +   M   +V  +E
Sbjct: 166 IMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSE 225

Query: 445 VTYSSVLRACASLAALEPGMQVHCLTVKANY--DMDVVVANALIDMYAKCGSITDARLVF 502
           +   S+    A LA L+ G  +H   ++        V +  ALIDMY KC ++  AR VF
Sbjct: 226 IGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVF 285

Query: 503 DMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLE 562
           D ++  + +SW AMI+ Y       E +++F  M   G  PN +T + ++  C   G LE
Sbjct: 286 DGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALE 345

Query: 563 QGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
            G+      + N G    +   T+ + + G+ G +  A  + +    +  +M+W A++ +
Sbjct: 346 LGKLLHAFTLRN-GFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSK-DLMMWSAMISS 403

Query: 623 CIIHNNVE 630
              +N ++
Sbjct: 404 YAQNNCID 411


>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
 gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 823

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 268/802 (33%), Positives = 425/802 (52%), Gaps = 56/802 (6%)

Query: 51  VSEFNSHSYATSLQSCIQN-------DD----------LQTAMTIHCQVLKKGNCLDLFA 93
           + EF++   A +LQ C +N       DD          LQ+A  +H +++      ++  
Sbjct: 31  IREFSAS--ANALQDCWKNGNESKEIDDVHTLFRYCTNLQSAKCLHARLVVSKQIQNVCI 88

Query: 94  TNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFST-LHREG 152
           +  L+N+Y  L  +  A   FD +  R+  ++   I GY  +    E +  FS  +   G
Sbjct: 89  SAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSG 148

Query: 153 HELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFAR 212
              +   F + LK   ++       C+     K G   + +V  +LI  +S    V  AR
Sbjct: 149 LTPDYRTFPSVLKACRTVIDGNKIHCL---ALKFGFMWDVYVAASLIHLYSRYKAVGNAR 205

Query: 213 KVFD-------GLFNDCF---------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLD 256
            +FD       G +N            +EAL   + +RA+    ++ T   +L AC    
Sbjct: 206 ILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAG 261

Query: 257 TIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIA 316
                 + H  ++K   E +L+V+  L+DLY + G + + +++F+ M  +D+I W+ +I 
Sbjct: 262 DFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIK 321

Query: 317 RYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG-LL 375
            Y   +  + A+ LF  MR + + P+  T +S+    + +  +     +    +R G  L
Sbjct: 322 AYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFL 381

Query: 376 SDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKM 435
            D+ + NA++ +YAK G ++++  +F   P  + ++WNT+I GY Q G   +A+ M++ M
Sbjct: 382 EDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIM 441

Query: 436 LEE-QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGS 494
            EE ++ A + T+ SVL AC+   AL  GM++H   +K    +DV V  +L DMY KCG 
Sbjct: 442 EEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGR 501

Query: 495 ITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSA 554
           + DA  +F  +   N V WN +I+ +  HG   + + +F  M   G +P+++TFV +LSA
Sbjct: 502 LEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSA 561

Query: 555 CSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVM 614
           CS+ GL+++G+  F+ M  +YGI P ++HY  MV + GRAG L+ A K I+ +  QP   
Sbjct: 562 CSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDAS 621

Query: 615 IWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE---------- 664
           IW ALL AC +H NV++G+++++H+ + EPE    HVLLSN+YA A  WE          
Sbjct: 622 IWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAH 681

Query: 665 -KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLR 723
            K   K PG S +E    V  F  G+ +H     +   L  L  K +  GY+PD   VL+
Sbjct: 682 GKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQ 741

Query: 724 DVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREI 783
           DV +DEKE  L  HSE+LA+AFAL   P  + IRI KNLR+C DCH+  K ISKI +REI
Sbjct: 742 DVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREI 801

Query: 784 IIRDVHRFHHFQDGCCSCGDFW 805
           I+RD +RFHHF++G CSCGD+W
Sbjct: 802 IVRDSNRFHHFKNGVCSCGDYW 823



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 106/429 (24%), Positives = 196/429 (45%), Gaps = 28/429 (6%)

Query: 25  LRGLSAQAALSTQQC-SNSTTTPITFS--VSEFNSHSYATSLQSCIQNDDLQTAMTIHCQ 81
           +R + +  A+ +  C S +    +T S  +   +S +  + L +C +  D    +TIH  
Sbjct: 213 VRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSY 272

Query: 82  VLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEA 141
            +K G   +LF +N L+++Y +  RL D  K+FD M  R+ IS+ + I+ Y ++ Q + A
Sbjct: 273 SIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRA 332

Query: 142 VGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLG-HDSNAFVGTALID 200
           + LF  +     + +     +   +L  +G    C  V     + G    +  +G A++ 
Sbjct: 333 ISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVV 392

Query: 201 AFSVCGCVEFARKVFDGLFNDCF----------------EEALNFFSQMRAVG-FKPNNF 243
            ++  G V+ AR VF+ L N                    EA+  ++ M   G    N  
Sbjct: 393 MYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQG 452

Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
           T+  VL AC     +R     HG  LK    +D++V  +L D+Y K G + +A  +F ++
Sbjct: 453 TWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQI 512

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
           P+ + +PW+ +IA +        AV LF  M    V P+  TFV++L AC+    +D G 
Sbjct: 513 PRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQ 572

Query: 364 QIHSLV-VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE-SPKRNHVTWNTMIV---- 417
               ++    G+   +     ++D+Y + G++E +++     S + +   W  ++     
Sbjct: 573 WCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRV 632

Query: 418 -GYVQLGEV 425
            G V LG++
Sbjct: 633 HGNVDLGKI 641


>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Vitis vinifera]
          Length = 852

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 289/834 (34%), Positives = 426/834 (51%), Gaps = 85/834 (10%)

Query: 54  FNSHSYATSLQSCI--QNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           F++ S  T L S +  Q   L +A  IH Q+L +G   D      ++++Y+  N    A 
Sbjct: 22  FSTASSTTDLTSTLFHQCKSLASAELIHQQLLVQGLPHD---PTHIISMYLTFNSPAKAL 78

Query: 112 KLFDEM-PERNTISFVTTIQGYTVSSQFVEAV-GLFSTLHREGHELNPFAFTAFLKVLVS 169
            +   + P  +T+ +   +   +V   F+E V  L+  + R G   + + F   LK    
Sbjct: 79  SVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGE 138

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEE---- 225
           +        V A V+  G + N FVG  L+  +  CG  E AR+VFD +      +    
Sbjct: 139 IPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSW 198

Query: 226 ---------------ALNFFSQM-RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCAL 269
                          A+  F +M   +G +P+  +   VL AC  +      K  HG AL
Sbjct: 199 NSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYAL 258

Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFM--------------- 314
           ++    D++V  A++D+Y K G +  A ++FE M  KDV+ W+ M               
Sbjct: 259 RSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALG 318

Query: 315 --------------------IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
                               IA YAQ  L  +A+++F +MR     PN  T VS+L  CA
Sbjct: 319 LFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCA 378

Query: 355 TMEGLDLGNQIHSLVVRVGL-------LSDVFVSNALMDVYAKCGRMENSVELFAESPKR 407
               L  G + H   ++  L         D+ V NAL+D+Y+KC   + +  +F   P +
Sbjct: 379 LAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPK 438

Query: 408 NH--VTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ--VPATEVTYSSVLRACASLAALEPG 463
           +   VTW  +I G  Q GE  +A+ +FS+ML+    V     T S  L ACA L AL  G
Sbjct: 439 DRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFG 498

Query: 464 MQVHCLTVKANYDMDVV-VANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
            Q+H   ++  ++  ++ VAN LIDMY+K G +  AR+VFD M+  N VSW ++++GY M
Sbjct: 499 RQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGM 558

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
           HG   E L++F  MQ+ G  P+ +TFV VL ACS+ G+++QG  YF  M  ++G+ P  E
Sbjct: 559 HGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAE 618

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDF 642
           HY  MV LL RAG LD+A +LI G+P +P+  +W ALL AC ++ NVE+G  +A  +L+ 
Sbjct: 619 HYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLEL 678

Query: 643 EPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTS 691
           E  ++ ++ LLSNIYA AR W+  A            K PG SW++ +     F AGD S
Sbjct: 679 ESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWS 738

Query: 692 HADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMP 751
           H     I  +L  L  + +  GY+PD    L DV ++EK   L  HSEKLALA+ +    
Sbjct: 739 HPMSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTA 798

Query: 752 PSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           P +PIRI KNLR C DCH+A   IS I++ EII+RD  RFHHF++G CSC  +W
Sbjct: 799 PGAPIRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 852


>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 766

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 261/748 (34%), Positives = 397/748 (53%), Gaps = 61/748 (8%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D+   N  ++ +++      A  +F+ MP R+++S+   I GY  +S+F  A  LF  + 
Sbjct: 48  DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFAC-VYKLGHDSNAFVGTALIDAFSVCGCV 208
               E + F++   L      G+   C    A  ++ L  + +     +L+  ++  G V
Sbjct: 108 ----ERDLFSWNVML-----TGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYV 158

Query: 209 EFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKAC 252
           + AR+VFD +                 N   EEA   F          +   +  +   C
Sbjct: 159 DEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFE---------SKSDWDLISWNC 209

Query: 253 LGLDTIRVAKSAHGCALKTCYEMDLYVAVA---LLDLYTKSGEISNARRIFEEMPKKDVI 309
           L    +R  K   G A     +M +  A++   ++  Y + G +S ARR+F+E P +DV 
Sbjct: 210 LMGGFVR--KKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVF 267

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI-HSL 368
            W+ M++ Y Q  +  +A   F  M +     N+ ++ +++      + +D+  ++  S+
Sbjct: 268 TWTAMVSGYVQNGMLDEAKTFFDEMPE----KNEVSYNAMIAGYVQTKKMDIARELFESM 323

Query: 369 VVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKA 428
             R     ++   N ++  Y + G +  + + F   P+R+ V+W  +I GY Q G   +A
Sbjct: 324 PCR-----NISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEA 378

Query: 429 MIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDM 488
           + MF ++ ++       T+   L  CA +AALE G Q+H   VK  Y     V NAL+ M
Sbjct: 379 LNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAM 438

Query: 489 YAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTF 548
           Y KCGSI +A   F+ + + + VSWN M++GY+ HG   + L VF+ M+  G +P+ +T 
Sbjct: 439 YFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITM 498

Query: 549 VGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIP 608
           VGVLSACS+ GLL++G  YF SM  +YG+ P  +HYT M+ LLGRAG L++A  LI  +P
Sbjct: 499 VGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMP 558

Query: 609 FQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKA-- 666
           FQP    W ALLGA  IH N E+G  +A+ +   EP++   +VLLSN+YA +  W  A  
Sbjct: 559 FQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADK 618

Query: 667 ---------ASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPD 717
                      K PG SW+E Q  +H F  GD SH +   I   LE L++K R+ GY+  
Sbjct: 619 MRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSL 678

Query: 718 LSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISK 777
              VL DV E+EKE  L  HSEKLA+AF +  +P   PIR++KNLR+C DCH+AIK ISK
Sbjct: 679 TKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISK 738

Query: 778 IVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           IV R II+RD HRFHHF +G CSCGD+W
Sbjct: 739 IVGRLIILRDSHRFHHFNEGFCSCGDYW 766



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 132/518 (25%), Positives = 237/518 (45%), Gaps = 67/518 (12%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +S SY   +   ++N     A  +  Q+ ++    DLF+ NV+L  YV+  RL DA +LF
Sbjct: 79  SSVSYNAMISGYLRNSKFNLARNLFDQMPER----DLFSWNVMLTGYVRNCRLGDARRLF 134

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D MPE++ +S+ + + GY  +    EA  +F  +     E N  ++   L   V  G  E
Sbjct: 135 DLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNM----PEKNSISWNGLLAAYVHNGRIE 190

Query: 175 LCPCVFA-----------CVY-------KLGHD---------SNAFVGTALIDAFSVCGC 207
               +F            C+        KLG            +A     +I  ++  G 
Sbjct: 191 EACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGG 250

Query: 208 VEFARKVFDG----------------LFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKA 251
           +  AR++FD                 + N   +EA  FF +M     + N  ++  ++  
Sbjct: 251 LSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP----EKNEVSYNAMIAG 306

Query: 252 CLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPW 311
            +    + +A+       ++    ++     ++  Y + G+I+ AR+ F+ MP++D + W
Sbjct: 307 YVQTKKMDIARE----LFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSW 362

Query: 312 SFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR 371
           + +IA YAQ+    +A+ +F  ++Q   + N+ TF   L  CA +  L+LG QIH   V+
Sbjct: 363 AAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVK 422

Query: 372 VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIM 431
           +G  +  FV NAL+ +Y KCG ++ + + F    +++ V+WNTM+ GY + G   +A+ +
Sbjct: 423 MGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTV 482

Query: 432 FSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA----LID 487
           F  M    V   E+T   VL AC+    L+ G +      K   D  V+  +     +ID
Sbjct: 483 FESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTK---DYGVIPTSKHYTCMID 539

Query: 488 MYAKCGSITDAR-LVFDMMNDWNEVSWNAMISGYSMHG 524
           +  + G + +A+ L+ +M       SW A++    +HG
Sbjct: 540 LLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHG 577



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 117/431 (27%), Positives = 186/431 (43%), Gaps = 58/431 (13%)

Query: 50  SVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD 109
           ++ E NS S+   L + + N  ++ A    C + +  +  DL + N L+  +V+  +L D
Sbjct: 167 NMPEKNSISWNGLLAAYVHNGRIEEA----CLLFESKSDWDLISWNCLMGGFVRKKKLGD 222

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A  LFD+MP R+ IS+ T I GY       +A  LF     E    + F +TA +   V 
Sbjct: 223 ARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFD----ESPTRDVFTWTAMVSGYVQ 278

Query: 170 MGWAELCPCVFACVYKLGHDS-NAFVG--------------------------TALIDAF 202
            G  +     F  + +    S NA +                             +I  +
Sbjct: 279 NGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGY 338

Query: 203 SVCGCVEFARKVFDGL-FNDC---------------FEEALNFFSQMRAVGFKPNNFTFA 246
              G +  ARK FD +   DC               +EEALN F +++  G   N  TF 
Sbjct: 339 GQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFG 398

Query: 247 FVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK 306
             L  C  +  + + K  HG A+K  Y    +V  ALL +Y K G I  A   FE + +K
Sbjct: 399 CALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEK 458

Query: 307 DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ-I 365
           DV+ W+ M+A YA+      A+ +F  M+ A V P++ T V VL AC+    LD G +  
Sbjct: 459 DVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYF 518

Query: 366 HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTM-----IVGY 419
           +S+    G++        ++D+  + GR+E + +L    P +    +W  +     I G 
Sbjct: 519 YSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGN 578

Query: 420 VQLGEVGKAMI 430
            +LGE    M+
Sbjct: 579 TELGEKAAEMV 589



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/311 (22%), Positives = 128/311 (41%), Gaps = 37/311 (11%)

Query: 51  VSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDA 110
           + E N  SY   +   +Q       M I  ++ +   C ++ + N ++  Y ++  +  A
Sbjct: 292 MPEKNEVSYNAMIAGYVQT----KKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQA 347

Query: 111 TKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSM 170
            K FD MP+R+ +S+   I GY  S  + EA+ +F  + ++G  LN   F   L     +
Sbjct: 348 RKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADI 407

Query: 171 GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF 223
              EL   +     K+G+ +  FVG AL+  +  CG ++ A   F+G+       +N   
Sbjct: 408 AALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTML 467

Query: 224 ---------EEALNFFSQMRAVGFKPNNFTFAFVLKAC-------LGLDTIRVAKSAHGC 267
                     +AL  F  M+  G KP+  T   VL AC        G +        +G 
Sbjct: 468 AGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGV 527

Query: 268 ALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIAR---YAQTDL 323
              + +         ++DL  ++G +  A+ +   MP +     W  ++     +  T+L
Sbjct: 528 IPTSKH------YTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTEL 581

Query: 324 SIDAVELFCRM 334
              A E+  +M
Sbjct: 582 GEKAAEMVFKM 592



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 10/155 (6%)

Query: 476 DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDL 535
           D D++  N  I  + + G    A  VF+ M   + VS+NAMISGY  +        +FD 
Sbjct: 46  DPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQ 105

Query: 536 MQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAG 595
           M +R     N+   G +  C     L      F  M      E  +  + S++S   + G
Sbjct: 106 MPERDLFSWNVMLTGYVRNCR----LGDARRLFDLMP-----EKDVVSWNSLLSGYAQNG 156

Query: 596 HLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
           ++D+A ++ + +P + S+  W  LL A + +  +E
Sbjct: 157 YVDEAREVFDNMPEKNSIS-WNGLLAAYVHNGRIE 190


>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 980

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 261/748 (34%), Positives = 397/748 (53%), Gaps = 61/748 (8%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D+   N  ++ +++      A  +F+ MP R+++S+   I GY  +S+F  A  LF  + 
Sbjct: 48  DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFAC-VYKLGHDSNAFVGTALIDAFSVCGCV 208
               E + F++   L      G+   C    A  ++ L  + +     +L+  ++  G V
Sbjct: 108 ----ERDLFSWNVML-----TGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYV 158

Query: 209 EFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKAC 252
           + AR+VFD +                 N   EEA   F          +   +  +   C
Sbjct: 159 DEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFE---------SKSDWDLISWNC 209

Query: 253 LGLDTIRVAKSAHGCALKTCYEMDLYVAVA---LLDLYTKSGEISNARRIFEEMPKKDVI 309
           L    +R  K   G A     +M +  A++   ++  Y + G +S ARR+F+E P +DV 
Sbjct: 210 LMGGFVR--KKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVF 267

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI-HSL 368
            W+ M++ Y Q  +  +A   F  M +     N+ ++ +++      + +D+  ++  S+
Sbjct: 268 TWTAMVSGYVQNGMLDEAKTFFDEMPEK----NEVSYNAMIAGYVQTKKMDIARELFESM 323

Query: 369 VVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKA 428
             R     ++   N ++  Y + G +  + + F   P+R+ V+W  +I GY Q G   +A
Sbjct: 324 PCR-----NISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEA 378

Query: 429 MIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDM 488
           + MF ++ ++       T+   L  CA +AALE G Q+H   VK  Y     V NAL+ M
Sbjct: 379 LNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAM 438

Query: 489 YAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTF 548
           Y KCGSI +A   F+ + + + VSWN M++GY+ HG   + L VF+ M+  G +P+ +T 
Sbjct: 439 YFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITM 498

Query: 549 VGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIP 608
           VGVLSACS+ GLL++G  YF SM  +YG+ P  +HYT M+ LLGRAG L++A  LI  +P
Sbjct: 499 VGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMP 558

Query: 609 FQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKA-- 666
           FQP    W ALLGA  IH N E+G  +A+ +   EP++   +VLLSN+YA +  W  A  
Sbjct: 559 FQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADK 618

Query: 667 ---------ASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPD 717
                      K PG SW+E Q  +H F  GD SH +   I   LE L++K R+ GY+  
Sbjct: 619 MRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSL 678

Query: 718 LSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISK 777
              VL DV E+EKE  L  HSEKLA+AF +  +P   PIR++KNLR+C DCH+AIK ISK
Sbjct: 679 TKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISK 738

Query: 778 IVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           IV R II+RD HRFHHF +G CSCGD+W
Sbjct: 739 IVGRLIILRDSHRFHHFNEGFCSCGDYW 766



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 132/518 (25%), Positives = 237/518 (45%), Gaps = 67/518 (12%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +S SY   +   ++N     A  +  Q+ ++    DLF+ NV+L  YV+  RL DA +LF
Sbjct: 79  SSVSYNAMISGYLRNSKFNLARNLFDQMPER----DLFSWNVMLTGYVRNCRLGDARRLF 134

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D MPE++ +S+ + + GY  +    EA  +F  +     E N  ++   L   V  G  E
Sbjct: 135 DLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNM----PEKNSISWNGLLAAYVHNGRIE 190

Query: 175 LCPCVFA-----------CVY-------KLGHD---------SNAFVGTALIDAFSVCGC 207
               +F            C+        KLG            +A     +I  ++  G 
Sbjct: 191 EACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGG 250

Query: 208 VEFARKVFDG----------------LFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKA 251
           +  AR++FD                 + N   +EA  FF +M     + N  ++  ++  
Sbjct: 251 LSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP----EKNEVSYNAMIAG 306

Query: 252 CLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPW 311
            +    + +A+       ++    ++     ++  Y + G+I+ AR+ F+ MP++D + W
Sbjct: 307 YVQTKKMDIARE----LFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSW 362

Query: 312 SFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR 371
           + +IA YAQ+    +A+ +F  ++Q   + N+ TF   L  CA +  L+LG QIH   V+
Sbjct: 363 AAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVK 422

Query: 372 VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIM 431
           +G  +  FV NAL+ +Y KCG ++ + + F    +++ V+WNTM+ GY + G   +A+ +
Sbjct: 423 MGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTV 482

Query: 432 FSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA----LID 487
           F  M    V   E+T   VL AC+    L+ G +      K   D  V+  +     +ID
Sbjct: 483 FESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTK---DYGVIPTSKHYTCMID 539

Query: 488 MYAKCGSITDAR-LVFDMMNDWNEVSWNAMISGYSMHG 524
           +  + G + +A+ L+ +M       SW A++    +HG
Sbjct: 540 LLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHG 577



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 117/431 (27%), Positives = 186/431 (43%), Gaps = 58/431 (13%)

Query: 50  SVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD 109
           ++ E NS S+   L + + N  ++ A    C + +  +  DL + N L+  +V+  +L D
Sbjct: 167 NMPEKNSISWNGLLAAYVHNGRIEEA----CLLFESKSDWDLISWNCLMGGFVRKKKLGD 222

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A  LFD+MP R+ IS+ T I GY       +A  LF     E    + F +TA +   V 
Sbjct: 223 ARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFD----ESPTRDVFTWTAMVSGYVQ 278

Query: 170 MGWAELCPCVFACVYKLGHDS-NAFVG--------------------------TALIDAF 202
            G  +     F  + +    S NA +                             +I  +
Sbjct: 279 NGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGY 338

Query: 203 SVCGCVEFARKVFDGLFN-DC---------------FEEALNFFSQMRAVGFKPNNFTFA 246
              G +  ARK FD +   DC               +EEALN F +++  G   N  TF 
Sbjct: 339 GQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFG 398

Query: 247 FVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK 306
             L  C  +  + + K  HG A+K  Y    +V  ALL +Y K G I  A   FE + +K
Sbjct: 399 CALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEK 458

Query: 307 DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ-I 365
           DV+ W+ M+A YA+      A+ +F  M+ A V P++ T V VL AC+    LD G +  
Sbjct: 459 DVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYF 518

Query: 366 HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTM-----IVGY 419
           +S+    G++        ++D+  + GR+E + +L    P +    +W  +     I G 
Sbjct: 519 YSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGN 578

Query: 420 VQLGEVGKAMI 430
            +LGE    M+
Sbjct: 579 TELGEKAAEMV 589



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 117/249 (46%), Gaps = 48/249 (19%)

Query: 559 GLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRA 618
           GLL+ G  YF  M   Y + P  +HYT M+ LLGR   L++                  A
Sbjct: 778 GLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEEG-----------------A 820

Query: 619 LLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAASKEPGLSWIEN 678
           LLGA  IH N E+G  +AQ      P++            +++  +    K PG SW E 
Sbjct: 821 LLGASRIHGNTELGEKAAQMFFKMGPQNS----------GISKMRDVGVQKVPGYSWFEV 870

Query: 679 QGMVHYFRAG-DTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVH 737
           Q  +H F  G   S    NI  G LE L++K R+     + +            +YL   
Sbjct: 871 QNKIHTFSVGLFLSRERENI--GFLEELDLKMREREEEKERTL-----------KYL--- 914

Query: 738 SEKLALAFALFKMPPSSPIRIIKN-LRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQD 796
           SE LA A  +  +P   P R++K  + +C DC +AIK +SKIV R I +RD HRF+   +
Sbjct: 915 SENLAAALGILTIPVGRPNRVMKKRVYVCEDCRSAIKHMSKIVGRLITLRDSHRFN---E 971

Query: 797 GCCSCGDFW 805
             CSCG++W
Sbjct: 972 SICSCGEYW 980



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 71/311 (22%), Positives = 128/311 (41%), Gaps = 37/311 (11%)

Query: 51  VSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDA 110
           + E N  SY   +   +Q       M I  ++ +   C ++ + N ++  Y ++  +  A
Sbjct: 292 MPEKNEVSYNAMIAGYVQT----KKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQA 347

Query: 111 TKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSM 170
            K FD MP+R+ +S+   I GY  S  + EA+ +F  + ++G  LN   F   L     +
Sbjct: 348 RKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADI 407

Query: 171 GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF 223
              EL   +     K+G+ +  FVG AL+  +  CG ++ A   F+G+       +N   
Sbjct: 408 AALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTML 467

Query: 224 ---------EEALNFFSQMRAVGFKPNNFTFAFVLKAC-------LGLDTIRVAKSAHGC 267
                     +AL  F  M+  G KP+  T   VL AC        G +        +G 
Sbjct: 468 AGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGV 527

Query: 268 ALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIAR---YAQTDL 323
              + +         ++DL  ++G +  A+ +   MP +     W  ++     +  T+L
Sbjct: 528 IPTSKH------YTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTEL 581

Query: 324 SIDAVELFCRM 334
              A E+  +M
Sbjct: 582 GEKAAEMVFKM 592



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 10/155 (6%)

Query: 476 DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDL 535
           D D++  N  I  + + G    A  VF+ M   + VS+NAMISGY  +        +FD 
Sbjct: 46  DPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQ 105

Query: 536 MQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAG 595
           M +R     N+   G +  C     L      F  M      E  +  + S++S   + G
Sbjct: 106 MPERDLFSWNVMLTGYVRNCR----LGDARRLFDLMP-----EKDVVSWNSLLSGYAQNG 156

Query: 596 HLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
           ++D+A ++ + +P + S+  W  LL A + +  +E
Sbjct: 157 YVDEAREVFDNMPEKNSIS-WNGLLAAYVHNGRIE 190


>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
 gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
          Length = 886

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 272/794 (34%), Positives = 403/794 (50%), Gaps = 89/794 (11%)

Query: 101 YVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAF 160
           Y+      DA  + + +     + +   ++ +    +   A+G+   + R G + + F  
Sbjct: 93  YLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTL 152

Query: 161 TAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN 220
              LK    +            +   G +SN FV  AL+  +S  G +E A  VFD +  
Sbjct: 153 PYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITR 212

Query: 221 DCFEE-------------------ALNFFSQM------RAVGFKPNNFTFAFVLKACLGL 255
              ++                   AL+ FS+M      +A   + +  +   +L AC  L
Sbjct: 213 KGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASL 272

Query: 256 DTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMI 315
             +   K  H  A++     D +V  AL+D Y K G + +A  +F  M  KDV+ W+ M+
Sbjct: 273 KALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMV 332

Query: 316 ARYAQTDLSIDAVELFCRMRQ-----------AFVA------------------------ 340
             Y Q+     A ELF  MR+           A +A                        
Sbjct: 333 TGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSE 392

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLS------------DVFVSNALMDVY 388
           PN  T +S+L ACA++  L  G + H+  ++  LLS            D+ V NAL+D+Y
Sbjct: 393 PNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMY 452

Query: 389 AKCGRMENSVELFAESPKR--NHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ--VPATE 444
           +KC   + +  +F   P+R  N VTW  MI GY Q G+   A+ +FS+M+ +   V    
Sbjct: 453 SKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNA 512

Query: 445 VTYSSVLRACASLAALEPGMQVHC-LTVKANYDMDV-VVANALIDMYAKCGSITDARLVF 502
            T S +L ACA L++L  G Q+H  +T    Y+  V  VAN LIDMY+KCG +  AR VF
Sbjct: 513 YTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVF 572

Query: 503 DMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLE 562
           D M   NEVSW +M+SGY MHG   E L +FD MQ+ G+ P++++F+ +L ACS+ G+++
Sbjct: 573 DSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVD 632

Query: 563 QGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           QG  YF  M ++YG+    +HY  ++ LL R+G LDKA K I+ +P +PS  IW ALL A
Sbjct: 633 QGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSA 692

Query: 623 CIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEP 671
           C +H+NVE+   +   ++  + E++ ++ L+SNIYA AR W+  A            K P
Sbjct: 693 CRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMKKSGIKKRP 752

Query: 672 GLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKE 731
           G SW++ +     F  GD SH     I  +LE L  + +  GY+P+ +  L DV ++EK 
Sbjct: 753 GCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALHDVDDEEKN 812

Query: 732 RYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRF 791
             L  HSEKLALA+ L    P  PIRI KNLR+C DCH+A   ISKIV  EII+RD  RF
Sbjct: 813 NLLTEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFIYISKIVDHEIIVRDSSRF 872

Query: 792 HHFQDGCCSCGDFW 805
           HHF++G CSCG +W
Sbjct: 873 HHFKNGSCSCGGYW 886



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 152/543 (27%), Positives = 255/543 (46%), Gaps = 88/543 (16%)

Query: 194 VGTALIDAFSVCGCVEFARKVFDGLFNDC----------------FEEALNFFSQMRAVG 237
           +GT ++ ++  CG    A  V + +                     + A+    +M   G
Sbjct: 85  LGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAG 144

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR 297
            KP++FT  + LKAC  L + R   + HG      +E +++V  AL+ +Y++SG + +A 
Sbjct: 145 TKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDAS 204

Query: 298 RIFEEMPKK---DVIPWSFMIARYAQTDLSIDAVELFCRMRQAF--VAPNQ----FTFVS 348
            +F+E+ +K   DVI W+ ++A + +      A++LF  M       A N+     + V+
Sbjct: 205 LVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVN 264

Query: 349 VLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRN 408
           +L ACA+++ L    +IHS  +R G  +D FV NAL+D YAKCG M+++V +F     ++
Sbjct: 265 ILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKD 324

Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV------------------ 450
            V+WN M+ GY Q G+ G A  +F  M +E +P   +T+S+V                  
Sbjct: 325 VVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQ 384

Query: 451 -----------------LRACASLAALEPGMQVHCLTVK------------ANYDMDVVV 481
                            L ACASL AL  GM+ H  ++K                 D+VV
Sbjct: 385 QMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVV 444

Query: 482 ANALIDMYAKCGSITDARLVFDMM--NDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
            NALIDMY+KC S   AR +F+ +   + N V+W  MI GY+ +G S + LK+F  M  +
Sbjct: 445 HNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISK 504

Query: 540 GW--RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTS-MVSLLGRAGH 596
            +   PN  T   +L AC++   L  G+     +  ++  E  +    + ++ +  + G 
Sbjct: 505 PYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGD 564

Query: 597 LDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD------FEPEDEATH 650
           +D A  + + +P +  V  W +++    +H   +     A  I D      F P+D +  
Sbjct: 565 VDTARNVFDSMPKRNEVS-WTSMMSGYGMHGRGK----EALDIFDKMQKAGFVPDDISFL 619

Query: 651 VLL 653
           VLL
Sbjct: 620 VLL 622



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 145/546 (26%), Positives = 247/546 (45%), Gaps = 88/546 (16%)

Query: 62  SLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPER- 120
           +L++C +    ++    H  +   G   ++F  N L+ +Y +   L DA+ +FDE+  + 
Sbjct: 155 ALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKG 214

Query: 121 --NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHEL------NPFAFTAFLKVLVSMGW 172
             + IS+ + +  +   S    A+ LFS +    HE       +  +    L    S+  
Sbjct: 215 IDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKA 274

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------- 216
                 + +   + G  ++AFV  ALID ++ CG ++ A  VF+                
Sbjct: 275 LPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTG 334

Query: 217 ----GLFNDCFE-------------------------------EALNFFSQMRAVGFKPN 241
               G F   FE                               EAL+ F QM   G +PN
Sbjct: 335 YTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPN 394

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTC------------YEMDLYVAVALLDLYTK 289
           + T   +L AC  L  +      H  +LK C               DL V  AL+D+Y+K
Sbjct: 395 SVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSK 454

Query: 290 SGEISNARRIFEEMPKKD--VIPWSFMIARYAQTDLSIDAVELFCRM--RQAFVAPNQFT 345
                 AR IF  +P+++  V+ W+ MI  YAQ   S DA++LF  M  +   VAPN +T
Sbjct: 455 CRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYT 514

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLL--SDVFVSNALMDVYAKCGRMENSVELFAE 403
              +L ACA +  L +G QIH+ V R      S  FV+N L+D+Y+KCG ++ +  +F  
Sbjct: 515 ISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDS 574

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
            PKRN V+W +M+ GY   G   +A+ +F KM +      ++++  +L AC+    ++ G
Sbjct: 575 MPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQG 634

Query: 464 MQVHCLTVKANYDMDVVVANA-----LIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMI 517
           +    + ++++Y    V+A+A     +ID+ A+ G +  A + + +M  + +   W A++
Sbjct: 635 LDYFDI-MRSDYG---VIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALL 690

Query: 518 SGYSMH 523
           S   +H
Sbjct: 691 SACRVH 696


>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
          Length = 671

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 242/624 (38%), Positives = 365/624 (58%), Gaps = 44/624 (7%)

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           +L  +  M ++G  PN++TF F+LK+C    T    +  HG  LK  +++DLYV  +L+ 
Sbjct: 48  SLTLYVCMVSLGLLPNSYTFPFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLIS 107

Query: 286 LYTKS-------------------------------GEISNARRIFEEMPKKDVIPWSFM 314
           +Y ++                               G+I +A+++F+E+P KDV+ W+ M
Sbjct: 108 MYVQNWRLEDAYKVFDRSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAM 167

Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL 374
           I+ YA+T    +A+ELF  M +  V P++ T+V+VL ACA    ++LG Q+HS V   G 
Sbjct: 168 ISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGF 227

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
            S++ + NAL+D+Y+KCG +E +  LF     ++ ++WNT+I GY  +    +A+++F +
Sbjct: 228 DSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQE 287

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK--ANYDMDVVVANALIDMYAKC 492
           ML       +VT  SVL ACA L A++ G  +H    K          +  +LIDMYAKC
Sbjct: 288 MLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKC 347

Query: 493 GSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL 552
           G I  A  VF+ M   +  SWNAMI G++MHG +     +F  M++ G  P+++TFVG+L
Sbjct: 348 GDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLL 407

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
           SACS+ G+L+ G   F+SM  +Y + P +EHY  M+ LLG +G   +A ++I  +  +P 
Sbjct: 408 SACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPD 467

Query: 613 VMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA----- 667
            +IW +LL AC +H NVE+    AQ+++  EPE+ ++++LLSNIYA A  WE  A     
Sbjct: 468 GVIWCSLLKACKMHGNVELAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRAL 527

Query: 668 ------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAV 721
                  K PG S IE   +V  F  GD  H     I GMLE + +   +AG++PD S V
Sbjct: 528 LNGKCMKKVPGCSSIEVDSVVFEFVVGDKFHPQNREIYGMLEEMEVLLEEAGFVPDTSEV 587

Query: 722 LRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQR 781
           L+++ E+ KE  L  HSEKLA+AF L    P + + I+KNLR+C +CH A K++SKI +R
Sbjct: 588 LQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLLSKIYKR 647

Query: 782 EIIIRDVHRFHHFQDGCCSCGDFW 805
           EI+ RD  RFHHF+DG CSC D+W
Sbjct: 648 EIVARDRTRFHHFRDGVCSCNDYW 671



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 123/473 (26%), Positives = 219/473 (46%), Gaps = 53/473 (11%)

Query: 104 LNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAF 163
            + LP AT +F+ + E N + + T I+G+ +SS  V ++ L+  +   G   N + F   
Sbjct: 11  FDGLPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFL 70

Query: 164 LKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD------- 216
           LK             +   V KLG D + +V T+LI  +     +E A KVFD       
Sbjct: 71  LKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDV 130

Query: 217 --------------------GLFND--------------------CFEEALNFFSQMRAV 236
                                LF++                    C++EAL  F +M  +
Sbjct: 131 VSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKM 190

Query: 237 GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNA 296
             +P+  T+  VL AC    +I + +  H       ++ +L +  AL+DLY+K GE+  A
Sbjct: 191 NVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETA 250

Query: 297 RRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM 356
             +F+ +  KDVI W+ +I  Y   +L  +A+ LF  M ++   PN  T +SVL ACA +
Sbjct: 251 CGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHL 310

Query: 357 EGLDLGNQIHSLVVR--VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
             +D+G  IH  + +   G+ +   +  +L+D+YAKCG +E + ++F     ++  +WN 
Sbjct: 311 GAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNA 370

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
           MI G+   G    +  +FS+M +  +   ++T+  +L AC+    L+ G  +   ++  +
Sbjct: 371 MIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIF-RSMTQD 429

Query: 475 YDMDVVVAN--ALIDMYAKCGSITDARLVFDMMN-DWNEVSWNAMISGYSMHG 524
           Y M   + +   +ID+    G   +A  + + M  + + V W +++    MHG
Sbjct: 430 YKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHG 482



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 122/257 (47%), Gaps = 33/257 (12%)

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           +  +F    + N + WNTMI G+    +   ++ ++  M+   +     T+  +L++CA 
Sbjct: 17  ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAK 76

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDM---------------------------- 488
                 G Q+H   +K  +D+D+ V  +LI M                            
Sbjct: 77  SKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTAL 136

Query: 489 ---YAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNN 545
              YA  G I  A+ +FD +   + VSWNAMISGY+  G   E L++F+ M +   RP+ 
Sbjct: 137 ITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDE 196

Query: 546 LTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
            T+V VLSAC++ G +E G     S V ++G +  ++   +++ L  + G ++ A  L +
Sbjct: 197 STYVTVLSACAHSGSIELGRQ-VHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQ 255

Query: 606 GIPFQPSVMIWRALLGA 622
           G+ ++  V+ W  L+G 
Sbjct: 256 GLSYK-DVISWNTLIGG 271


>gi|414591609|tpg|DAA42180.1| TPA: hypothetical protein ZEAMMB73_073969 [Zea mays]
          Length = 696

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 249/596 (41%), Positives = 354/596 (59%), Gaps = 16/596 (2%)

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSA-HGCALKTCY-EMDLYVAVA 282
           +AL+ F+ M  +G +PN+FTF    KA         A +  H  AL+  Y   D +V+ A
Sbjct: 102 QALSAFAAMLRLGLRPNDFTFPSAFKAAASAPPRSAAGTQLHALALRFGYLPDDAFVSCA 161

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
            LD+Y K+G ++ ARR+F+EMP ++V+ W+ ++         ++ VE +  +R A   PN
Sbjct: 162 ALDMYFKTGCLALARRLFDEMPNRNVVAWNAVMTNAVLDGRPLETVEAYFGLRGAGGMPN 221

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
             +  +   ACA M  L LG Q +  V + G   DV VSN+++D Y KC  +  +  +F 
Sbjct: 222 VVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFGKDVSVSNSVVDFYGKCRCVGKARAVFD 281

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
               RN+V+W +M+V Y Q G   +A  ++          T+   SSVL  CA L  L+ 
Sbjct: 282 GMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLGARRAGEEPTDFMVSSVLTTCAGLLGLDL 341

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G  +H + V++  D ++ VA+AL+DMY KCG I DA  VF  M   N V+WNAMI GY+ 
Sbjct: 342 GRALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAEQVFFEMPQRNLVTWNAMIGGYAH 401

Query: 523 HGLSAEVLKVFDLM-QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
            G +   L VFD M   +   PN +T V VL+ACS GGL ++G   F++M   +GIEP I
Sbjct: 402 IGDAHNALSVFDKMIMGQETAPNYITLVNVLTACSRGGLTKEGYELFQTMKWRFGIEPRI 461

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
           EHY  +V LL RAG  ++A K+I+G+P +PS+ +W ALLG C +H   E+GR++A+ + +
Sbjct: 462 EHYACVVDLLCRAGMEERAYKIIQGMPMRPSISVWGALLGGCKMHGKTELGRIAAEKLFE 521

Query: 642 FEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDT 690
            +P+D   HVLLSN+ A A  W +A             K+PG SWI  + +VH F+A DT
Sbjct: 522 LDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNVGIKKDPGRSWITWKNVVHVFQAKDT 581

Query: 691 SHADMNI-IRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFK 749
           +H DMN  I+ +L  L  + + AGY+PD    L D+ E+EKE  ++ HSEKLALAF L  
Sbjct: 582 TH-DMNREIQALLAKLKGQMQAAGYMPDTQYALYDLEEEEKESEVFQHSEKLALAFGLIC 640

Query: 750 MPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +PP  PIRI+KNLRICVDCH A K IS I  REII+RD + FHHF++  CSC D+W
Sbjct: 641 IPPGIPIRIMKNLRICVDCHRAFKFISGIAGREIIVRDNNMFHHFKNYECSCKDYW 696



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 182/393 (46%), Gaps = 27/393 (6%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D F +   L++Y K   L  A +LFDEMP RN +++   +    +  + +E V  +  L 
Sbjct: 155 DAFVSCAALDMYFKTGCLALARRLFDEMPNRNVVAWNAVMTNAVLDGRPLETVEAYFGLR 214

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
             G   N  +  AF      M    L    +  V K G   +  V  +++D +  C CV 
Sbjct: 215 GAGGMPNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFGKDVSVSNSVVDFYGKCRCVG 274

Query: 210 FARKVFDGLF----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL 253
            AR VFDG+                 N   EEA   +   R  G +P +F  + VL  C 
Sbjct: 275 KARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLGARRAGEEPTDFMVSSVLTTCA 334

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSF 313
           GL  + + ++ H  A+++C + +++VA AL+D+Y K G I +A ++F EMP+++++ W+ 
Sbjct: 335 GLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAEQVFFEMPQRNLVTWNA 394

Query: 314 MIARYAQTDLSIDAVELFCRMRQAF-VAPNQFTFVSVLQACA----TMEGLDLGNQIHSL 368
           MI  YA    + +A+ +F +M      APN  T V+VL AC+    T EG +L     ++
Sbjct: 395 MIGGYAHIGDAHNALSVFDKMIMGQETAPNYITLVNVLTACSRGGLTKEGYEL---FQTM 451

Query: 369 VVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT-WNTMIVGYVQLGEVGK 427
             R G+   +     ++D+  + G  E + ++    P R  ++ W  ++ G    G+   
Sbjct: 452 KWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGMPMRPSISVWGALLGGCKMHGKTEL 511

Query: 428 AMIMFSKM--LEEQVPATEVTYSSVLRACASLA 458
             I   K+  L+ Q     V  S++L +    A
Sbjct: 512 GRIAAEKLFELDPQDSGNHVLLSNMLASAGRWA 544



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/381 (27%), Positives = 180/381 (47%), Gaps = 5/381 (1%)

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYE-MDLYVAVALLDLYTKSGEISNARRIFEEM 303
            A  ++A +   + R+ ++AH  AL+     +  ++   L++LY+K      A       
Sbjct: 20  LAGAVEAAIATRSARLGRAAHARALRLLSPALPPFLCAHLVNLYSKLDLPGAAAASLAAD 79

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQ-ACATMEGLDLG 362
           P   V+ ++  I+  AQ    + A+  F  M +  + PN FTF S  + A +       G
Sbjct: 80  PSPTVVSYTAFISGAAQHARPLQALSAFAAMLRLGLRPNDFTFPSAFKAAASAPPRSAAG 139

Query: 363 NQIHSLVVRVGLL-SDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQ 421
            Q+H+L +R G L  D FVS A +D+Y K G +  +  LF E P RN V WN ++   V 
Sbjct: 140 TQLHALALRFGYLPDDAFVSCAALDMYFKTGCLALARRLFDEMPNRNVVAWNAVMTNAVL 199

Query: 422 LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVV 481
            G   + +  +  +         V+  +   ACA +  L  G Q +    K  +  DV V
Sbjct: 200 DGRPLETVEAYFGLRGAGGMPNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFGKDVSV 259

Query: 482 ANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW 541
           +N+++D Y KC  +  AR VFD M   N VSW +M+  Y+ +G   E   V+   ++ G 
Sbjct: 260 SNSVVDFYGKCRCVGKARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLGARRAGE 319

Query: 542 RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAA 601
            P +     VL+ C+    L+ G A   ++     I+  I   +++V + G+ G ++ A 
Sbjct: 320 EPTDFMVSSVLTTCAGLLGLDLGRA-LHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAE 378

Query: 602 KLIEGIPFQPSVMIWRALLGA 622
           ++   +P Q +++ W A++G 
Sbjct: 379 QVFFEMP-QRNLVTWNAMIGG 398



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 71/298 (23%), Positives = 119/298 (39%), Gaps = 35/298 (11%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
             +C    +L      +  V K G   D+  +N +++ Y K   +  A  +FD M  RN 
Sbjct: 229 FNACAGMTNLSLGEQFYGFVAKCGFGKDVSVSNSVVDFYGKCRCVGKARAVFDGMGVRNN 288

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +S+ + +  Y  +    EA  ++    R G E   F  ++ L     +   +L   + A 
Sbjct: 289 VSWCSMVVAYAQNGAEEEAFFVYLGARRAGEEPTDFMVSSVLTTCAGLLGLDLGRALHAV 348

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF----------------EEA 226
             +   DSN FV +AL+D +  CG +E A +VF  +                       A
Sbjct: 349 AVRSCIDSNIFVASALVDMYGKCGGIEDAEQVFFEMPQRNLVTWNAMIGGYAHIGDAHNA 408

Query: 227 LNFFSQM-RAVGFKPNNFTFAFVLKACL-------GLDTIRVAKSAHGCALKTCYEMDLY 278
           L+ F +M       PN  T   VL AC        G +  +  K   G   +    ++ Y
Sbjct: 409 LSVFDKMIMGQETAPNYITLVNVLTACSRGGLTKEGYELFQTMKWRFGIEPR----IEHY 464

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIP-WSFMIA---RYAQTDLS-IDAVELF 331
             V  +DL  ++G    A +I + MP +  I  W  ++     + +T+L  I A +LF
Sbjct: 465 ACV--VDLLCRAGMEERAYKIIQGMPMRPSISVWGALLGGCKMHGKTELGRIAAEKLF 520


>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 727

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 238/646 (36%), Positives = 367/646 (56%), Gaps = 28/646 (4%)

Query: 187 GHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFF 230
           G   N F+ T L++  S  G + +ARK+FD                   N+ + + +  +
Sbjct: 83  GLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNNMYRDTVEMY 142

Query: 231 SQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKS 290
             MR  G  P+ FTF +VLKAC  L    ++   HG  +K  +  D++V   L+ LY K 
Sbjct: 143 RWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKC 202

Query: 291 GEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVL 350
           G I  A+ +F+ +  + ++ W+ +I+ YAQ   +++A+ +F +MR   V P+    VS+L
Sbjct: 203 GHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSIL 262

Query: 351 QACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHV 410
           +A   ++ L+ G  IH  V+++GL  +  +  +L   YAKCG +  +   F +    N +
Sbjct: 263 RAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVI 322

Query: 411 TWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLT 470
            WN MI GY + G   +A+ +F  M+   +    VT  S + A A + +LE    +    
Sbjct: 323 MWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYV 382

Query: 471 VKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVL 530
            K+NY  D+ V  +LIDMYAKCGS+  AR VFD  +D + V W+AMI GY +HG   E +
Sbjct: 383 SKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAI 442

Query: 531 KVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSL 590
            ++ +M+Q G  PN++TF+G+L+AC++ GL+++G   F  M  ++ I P  EHY+ +V L
Sbjct: 443 NLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCM-KDFEIVPRNEHYSCVVDL 501

Query: 591 LGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATH 650
           LGRAG+L +A   I  IP +P V +W ALL AC I+  V +G  +A  +   +P +   +
Sbjct: 502 LGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTLGEYAANKLFSLDPYNTGHY 561

Query: 651 VLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIR 699
           V LSN+YA +  W           EK  +K+ G S IE  G +  F  GD SH     I 
Sbjct: 562 VQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYSVIEINGKLQAFHVGDKSHPMAKEIF 621

Query: 700 GMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRII 759
             L+ L  + ++ G++P   +VL D+  +EKE  L  HSE++A+A+ L    P + +RI 
Sbjct: 622 DELQRLERRLKEVGFVPYTESVLHDLNYEEKEENLSFHSERIAVAYGLISTAPGTTLRIT 681

Query: 760 KNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           KNLR CV+CH+AIK+ISK+V+REII+RD +RFHHF+DG CSCGD+W
Sbjct: 682 KNLRACVNCHSAIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 132/484 (27%), Positives = 230/484 (47%), Gaps = 32/484 (6%)

Query: 39  CSNSTTTPITFSVSE--FNSHSYATSLQSCIQNDDLQTAM-TIHCQVLKKGNCLDLFATN 95
           C +S   P  F   +  FNS S+  SL   I N   +  +  IH +++  G   + F   
Sbjct: 36  CFSSALHPEHFVNHDHCFNSDSFYASL---IDNSTHKRHLDQIHNRLVISGLQHNGFLMT 92

Query: 96  VLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHEL 155
            L+N    L ++  A KLFDE    +   +   I+ Y+ ++ + + V ++  +   G   
Sbjct: 93  KLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVHP 152

Query: 156 NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF 215
           + F F   LK    +    L   +   + K G  S+ FV   L+  ++ CG +  A+ VF
Sbjct: 153 DGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVF 212

Query: 216 DGLF----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIR 259
           DGL+                N    EAL  FSQMR  G KP+      +L+A   +D + 
Sbjct: 213 DGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLE 272

Query: 260 VAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYA 319
             +S HG  +K   E +  + ++L   Y K G ++ A+  F++M   +VI W+ MI+ YA
Sbjct: 273 QGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYA 332

Query: 320 QTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVF 379
           +   + +AV LF  M    + P+  T  S + A A +  L+L   +   V +    SD+F
Sbjct: 333 KNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIF 392

Query: 380 VSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ 439
           V+ +L+D+YAKCG +E +  +F  +  ++ V W+ MI+GY   G+  +A+ ++  M +  
Sbjct: 393 VNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAG 452

Query: 440 VPATEVTYSSVLRACASLAALEPGMQV-HCLTVKANYDMDVVVAN----ALIDMYAKCGS 494
           V   +VT+  +L AC     ++ G ++ HC+      D ++V  N     ++D+  + G 
Sbjct: 453 VFPNDVTFIGLLTACNHSGLVKEGWELFHCMK-----DFEIVPRNEHYSCVVDLLGRAGY 507

Query: 495 ITDA 498
           + +A
Sbjct: 508 LGEA 511



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 126/260 (48%), Gaps = 2/260 (0%)

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
           +QIH+ +V  GL  + F+   L++  +  G++  + +LF E    +   WN +I  Y + 
Sbjct: 73  DQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRN 132

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
                 + M+  M    V     T+  VL+AC  L        +H   +K  +  DV V 
Sbjct: 133 NMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQ 192

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
           N L+ +YAKCG I  A++VFD +     VSW ++ISGY+ +G + E L++F  M+  G +
Sbjct: 193 NGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVK 252

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           P+ +  V +L A ++   LEQG +     V   G+E       S+ +   + G +  A  
Sbjct: 253 PDWIALVSILRAYTDVDDLEQGRS-IHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKS 311

Query: 603 LIEGIPFQPSVMIWRALLGA 622
             + +    +V++W A++  
Sbjct: 312 FFDQMK-TTNVIMWNAMISG 330


>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 705

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 232/624 (37%), Positives = 359/624 (57%), Gaps = 50/624 (8%)

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           ++L  F  M A G  P++  F  VLK+C  L  + + +S HG  ++   + DLY   AL+
Sbjct: 89  QSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALM 148

Query: 285 DLYTK-------------SGEI-------------------SNARRIFEEMPKKDVIPWS 312
           ++Y+K             +GE+                    + R+IFE MP+KD++ W+
Sbjct: 149 NMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWN 208

Query: 313 FMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV 372
            +IA  A+  L  + + +   M  A + P+ FT  SVL   A    +  G +IH   +R 
Sbjct: 209 TIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQ 268

Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMF 432
           GL +D++V+++L+D+YAKC R+ +S  +F    +R+ ++WN++I G VQ G   + +  F
Sbjct: 269 GLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFF 328

Query: 433 SKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKC 492
            +ML  ++     ++SS++ ACA L  L  G Q+H    +  +D ++ +A++L+DMYAKC
Sbjct: 329 RQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKC 388

Query: 493 GSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL 552
           G+I  A+ +FD M   + VSW AMI G ++HG + + +++F+ M+  G +        VL
Sbjct: 389 GNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIK-------AVL 441

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
           +ACS+GGL+++   YF SM  ++GI P +EHY ++  LLGRAG L++A   I G+   P+
Sbjct: 442 TACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPT 501

Query: 613 VMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS---- 668
             IW  LL AC +H N+++    A  IL+ +P +   ++LL+NIY+ AR W++AA     
Sbjct: 502 GSIWATLLSACRVHKNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRAS 561

Query: 669 -------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAV 721
                  K P  SWIE +  V+ F AGD SH     IR  +E L     K GY+PD S V
Sbjct: 562 MRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSEV 621

Query: 722 LRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQR 781
             DV E++K+  +  HSE+LA+ F +   P    IR+ KNLR+C DCHTA K ISKIV R
Sbjct: 622 HHDVEEEQKKYLVCSHSERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIVGR 681

Query: 782 EIIIRDVHRFHHFQDGCCSCGDFW 805
           EI++RD  RFHHF++G CSCGD+W
Sbjct: 682 EIVVRDNSRFHHFKNGTCSCGDYW 705



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/429 (25%), Positives = 200/429 (46%), Gaps = 56/429 (13%)

Query: 75  AMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTV 134
           A  +H QVLK      L   ++LL++Y  +N L D+ +LF+ +     +++ + I+ YT 
Sbjct: 25  AQQLHAQVLKF-QASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTS 83

Query: 135 SSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFV 194
                +++G F  +   G   +   F + LK    +    L   +   + ++G D + + 
Sbjct: 84  HGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYT 143

Query: 195 GTALIDAFSVCGCVEFA--------------------------------RKVFDGL---- 218
           G AL++ +S    +E +                                RK+F+ +    
Sbjct: 144 GNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKD 203

Query: 219 ------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHG 266
                        N  +EE L    +M     KP++FT + VL        I   K  HG
Sbjct: 204 LVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHG 263

Query: 267 CALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSID 326
           C+++   + D+YVA +L+D+Y K   ++++ R+F  + ++D I W+ +IA   Q  L  +
Sbjct: 264 CSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDE 323

Query: 327 AVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMD 386
            +  F +M  A + P  ++F S++ ACA +  L LG Q+H  + R G   ++F++++L+D
Sbjct: 324 GLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVD 383

Query: 387 VYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVT 446
           +YAKCG +  + ++F     R+ V+W  MI+G    G+   A+ +F +M  E + A    
Sbjct: 384 MYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKA---- 439

Query: 447 YSSVLRACA 455
              VL AC+
Sbjct: 440 ---VLTACS 445



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 99/375 (26%), Positives = 183/375 (48%), Gaps = 34/375 (9%)

Query: 286 LYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFT 345
           +Y+    + ++ R+F  +     + W  +I  Y    L   ++  F  M  + + P+   
Sbjct: 49  IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAK------CGRM----- 394
           F SVL++CA +  L+LG  +H  ++RVGL  D++  NALM++Y+K       GR      
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168

Query: 395 --------------------ENSV-ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
                               E+SV ++F   P+++ V+WNT+I G  + G   + + M  
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228

Query: 434 KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCG 493
           +M    +     T SSVL   A    +  G ++H  +++   D D+ VA++LIDMYAKC 
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288

Query: 494 SITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLS 553
            + D+  VF ++ + + +SWN++I+G   +GL  E L+ F  M     +P + +F  ++ 
Sbjct: 289 RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMP 348

Query: 554 ACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSV 613
           AC++   L  G+     +  N G +  I   +S+V +  + G++  A ++ + +  +  V
Sbjct: 349 ACAHLTTLHLGKQLHGYITRN-GFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMV 407

Query: 614 MIWRALLGACIIHNN 628
             W A++  C +H  
Sbjct: 408 S-WTAMIMGCALHGQ 421



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/392 (23%), Positives = 178/392 (45%), Gaps = 56/392 (14%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDA-------- 110
           + + L+SC    DL    ++H  +++ G   DL+  N L+N+Y KL  L ++        
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168

Query: 111 ------------------------TKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFS 146
                                    K+F+ MPE++ +S+ T I G   +  + E + +  
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228

Query: 147 TLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCG 206
            +     + + F  ++ L ++           +  C  + G D++ +V ++LID ++ C 
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288

Query: 207 CVEFARKVF------DGLF----------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLK 250
            V  + +VF      DG+           N  F+E L FF QM     KP +++F+ ++ 
Sbjct: 289 RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMP 348

Query: 251 ACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIP 310
           AC  L T+ + K  HG   +  ++ ++++A +L+D+Y K G I  A++IF+ M  +D++ 
Sbjct: 349 ACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVS 408

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLV 369
           W+ MI   A    + DA+ELF +M    +        +VL AC+    +D      +S+ 
Sbjct: 409 WTAMIMGCALHGQAPDAIELFEQMETEGIK-------AVLTACSHGGLVDEAWKYFNSMT 461

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
              G+   V    A+ D+  + GR+E + +  
Sbjct: 462 RDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFI 493



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/214 (21%), Positives = 96/214 (44%), Gaps = 23/214 (10%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +S + ++ L    +N D+     IH   +++G   D++  + L+++Y K  R+ D+ ++F
Sbjct: 238 DSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVF 297

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             + ER+ IS+ + I G   +  F E +  F  +     +   ++F++ +     +    
Sbjct: 298 TLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLH 357

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------- 218
           L   +   + + G D N F+ ++L+D ++ CG +  A+++FD +                
Sbjct: 358 LGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCA 417

Query: 219 FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKAC 252
            +    +A+  F QM   G K        VL AC
Sbjct: 418 LHGQAPDAIELFEQMETEGIKA-------VLTAC 444


>gi|449482566|ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 275/848 (32%), Positives = 439/848 (51%), Gaps = 86/848 (10%)

Query: 42  STTTPITF--------SVSE--FNSHSYATSLQSCIQNDDL----------QTAMTIHCQ 81
           ++T+P  F        S+SE  F S S  TSL +     DL            A  +H Q
Sbjct: 63  NSTSPTQFFTSPQHLVSLSEPLFASRSLNTSLSTIASPFDLLRLSTRYGDPDLARAVHAQ 122

Query: 82  VLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEA 141
            LK     D+F  N L++ Y+KL  + DA K+F  +   N +S+   I G++ S    EA
Sbjct: 123 FLKLEE--DIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEA 180

Query: 142 VGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDA 201
           V LF  +   G E N + F A L   +     +L   V   V KLG  S  F+  AL+  
Sbjct: 181 VELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGL 240

Query: 202 FSVCGCVEFARKVFDGL-------FNDC---------FEEALNFFSQMRAV-GFKPNNFT 244
           +  CG ++   ++F+ +       +N           ++EA ++F  M+   G K ++F+
Sbjct: 241 YCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFS 300

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
            + +L AC G       +  H  ALK   E  L V+ +L+  YTK G  ++   +FE MP
Sbjct: 301 LSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMP 360

Query: 305 KKDVIPWSFMIARY-------------------------------AQTDLSIDAVELFCR 333
            +DVI W+ MI  Y                               ++ D    A+ELF  
Sbjct: 361 IRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIE 420

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           M +  V  +  T  S++ AC  ++   +  QI   V++ G+LS+  +  AL+D+Y +CGR
Sbjct: 421 MLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGR 480

Query: 394 MENSVELFAESPKRNHVT--WNTMIVGYVQLGEVGKAMIMF-SKMLEEQVPATEVTYSSV 450
           ME++ ++F +    N  T    +MI GY + G++ +A+ +F S   E  +   EV  +S+
Sbjct: 481 MEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSI 540

Query: 451 LRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE 510
           L  C S+   E GMQ+HC  +K+    +  V NA + MY+KC ++ DA  VF+ MN  + 
Sbjct: 541 LSLCGSIGFHEMGMQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDI 600

Query: 511 VSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNG--GLLEQGEAYF 568
           VSWN +++G+ +H    + L ++  M++ G +P+++TF  ++SA  +    L++   + F
Sbjct: 601 VSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLF 660

Query: 569 KSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
            SM   + I+P +EHY S +S+LGR G L++A + I  +P +P V +WRALL +C I+ N
Sbjct: 661 VSMETEHNIKPTLEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKN 720

Query: 629 VEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIE 677
             + +L+A++IL  EP+D  +++L SN+Y+ +  W           EK   K P  SWI 
Sbjct: 721 ERLEKLAARNILAVEPKDPLSYILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQSWII 780

Query: 678 NQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVH 737
           ++  +H F A D SH     I   LE L ++  K GY+PD S VL++V E +K+ +L+ H
Sbjct: 781 HENKIHSFYARDRSHPQGKDIYSGLEILILECLKVGYVPDTSFVLQEVEERQKKEFLFYH 840

Query: 738 SEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDG 797
           S KLA  F +    P  PI+I+KN+R+C DCH  +K +S + +R+I++RD   FH F DG
Sbjct: 841 SGKLAATFGILMTKPGKPIQIVKNVRLCGDCHNFLKYVSIVTRRKILLRDTSGFHWFIDG 900

Query: 798 CCSCGDFW 805
            CSC D+W
Sbjct: 901 QCSCTDYW 908


>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
          Length = 659

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 240/604 (39%), Positives = 347/604 (57%), Gaps = 26/604 (4%)

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           EAL  FS MR +   P   +F   +KAC  L  I   K  H  A    Y+ D++V+ AL+
Sbjct: 59  EALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALI 118

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ- 343
            +Y+  G++ +AR++F+E+PK+D++ W+ MI  Y     ++DAV LF   +   V  N  
Sbjct: 119 VMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGNALDAVSLF---KDLLVDENDD 175

Query: 344 --------FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
                      VSV+ AC+ +    L   IHS V++ G    V V N L+D YAK G   
Sbjct: 176 DDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGG 235

Query: 396 NSV--ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPA-TEVTYSSVLR 452
            +V  ++F +   ++ V++N+++  Y Q G   +A  +F ++++ +V     +T S+VL 
Sbjct: 236 VAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLL 295

Query: 453 ACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS 512
           A +   AL  G  +H   ++   + DV+V  ++IDMY KCG +  AR  FD M + N  S
Sbjct: 296 AVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRS 355

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
           W AMI+GY MHG +A+ L++F  M   G RPN +TFV VL+ACS+ GL  +G  +F +M 
Sbjct: 356 WTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMK 415

Query: 573 ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIG 632
             +G+EP +EHY  MV LLGRAG L KA  LI+ +  +P  +IW +LL AC IH NVE+ 
Sbjct: 416 GRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELA 475

Query: 633 RLSAQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGM 681
            +S   + + +  +   ++LLS+IYA A  W+           +   K PG S +E  G 
Sbjct: 476 EISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGE 535

Query: 682 VHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKL 741
           VH F  GD  H     I   L  LN K  +AGY+ + S+V  DV E+EKE  L VHSEKL
Sbjct: 536 VHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKL 595

Query: 742 ALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSC 801
           A+AF +    P S + ++KNLR+C DCH  IK+ISKIV RE ++RD  RFHHF+DG CSC
Sbjct: 596 AIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSC 655

Query: 802 GDFW 805
           GD+W
Sbjct: 656 GDYW 659



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 188/362 (51%), Gaps = 12/362 (3%)

Query: 277 LYVAVALLDLYTKSGEISNARRIFEE-MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
           L+ +V+ L    +  E  N   +F   + K DV  W+ +IA  A++  S +A+  F  MR
Sbjct: 9   LFCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMR 68

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
           +  + P + +F   ++AC+++  +  G Q H      G  SD+FVS+AL+ +Y+ CG++E
Sbjct: 69  KLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLE 128

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTY------SS 449
           ++ ++F E PKR+ V+W +MI GY   G    A+ +F  +L ++    +  +       S
Sbjct: 129 DARKVFDEIPKRDIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVS 188

Query: 450 VLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKC--GSITDARLVFDMMND 507
           V+ AC+ + A      +H   +K  +D  V V N L+D YAK   G +  AR +FD + D
Sbjct: 189 VISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVD 248

Query: 508 WNEVSWNAMISGYSMHGLSAEVLKVF-DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEA 566
            + VS+N+++S Y+  G+S E  +VF  L++ +    N +T   VL A S+ G L  G+ 
Sbjct: 249 KDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKC 308

Query: 567 YFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH 626
                V   G+E  +   TS++ +  + G ++ A K  + +    +V  W A++    +H
Sbjct: 309 -IHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMK-NKNVRSWTAMIAGYGMH 366

Query: 627 NN 628
            +
Sbjct: 367 GH 368



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 190/411 (46%), Gaps = 44/411 (10%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           S+  ++++C    D+ +    H Q    G   D+F ++ L+ +Y    +L DA K+FDE+
Sbjct: 78  SFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEI 137

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHE------LNPFAFTAFLKVLVSMG 171
           P+R+ +S+ + I+GY ++   ++AV LF  L  + ++      L+     + +     + 
Sbjct: 138 PKRDIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVP 197

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVC--GCVEFARKVFD------------- 216
              L   + + V K G D    VG  L+DA++    G V  ARK+FD             
Sbjct: 198 AKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSI 257

Query: 217 -------GLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCAL 269
                  G+ N+ F E      + + V F  N  T + VL A      +R+ K  H   +
Sbjct: 258 MSVYAQSGMSNEAF-EVFRRLVKNKVVTF--NAITLSTVLLAVSHSGALRIGKCIHDQVI 314

Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVE 329
           +   E D+ V  +++D+Y K G +  AR+ F+ M  K+V  W+ MIA Y     +  A+E
Sbjct: 315 RMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALE 374

Query: 330 LFCRMRQAFVAPNQFTFVSVLQACA----TMEGLDLGNQIHSLVVRVGLLSDVFVSNALM 385
           LF  M  + V PN  TFVSVL AC+     +EG    N +     R G+   +     ++
Sbjct: 375 LFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKG---RFGVEPGLEHYGCMV 431

Query: 386 DVYAKCGRMENSVELFAESP-KRNHVTWNTMIVG-----YVQLGEVGKAMI 430
           D+  + G ++ + +L      K + + W++++        V+L E+  A +
Sbjct: 432 DLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARL 482



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 53/114 (46%)

Query: 51  VSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDA 110
           V  FN+ + +T L +   +  L+    IH QV++ G   D+     ++++Y K  R+  A
Sbjct: 282 VVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETA 341

Query: 111 TKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFL 164
            K FD M  +N  S+   I GY +     +A+ LF  +   G   N   F + L
Sbjct: 342 RKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395


>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
          Length = 772

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 257/635 (40%), Positives = 373/635 (58%), Gaps = 33/635 (5%)

Query: 194 VGTALIDAFSVCGCVEFARKVF---------------DGL-FNDCFEEALNFFSQMRAVG 237
           +G  L++ ++ CG +  AR+VF                GL  N CF EA+  +  MR   
Sbjct: 71  IGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMITGLDQNGCFIEAVERYQSMRRHE 130

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR 297
             P +FT    L +C  L   ++ +  HG +LK   ++++ V+ AL+ LY ++G ++  R
Sbjct: 131 ILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECR 190

Query: 298 RIFEEMPKKDVIPWSFMIARYAQTDLSI-DAVELFCRMRQAFVAPNQFTFVSVLQACATM 356
           +IF  MP+ D + W+ +I   A ++ S+ +AV  F    +A    N+ TF SVL A +++
Sbjct: 191 KIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSL 250

Query: 357 EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE-SPKRNHVTWNTM 415
              +LG QIH L ++  +  +    NAL+  Y KCG M+   ++F+  S +R+ VTWN+M
Sbjct: 251 SFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSM 310

Query: 416 IVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY 475
           I GY+    + KA+ +   ML+         Y++VL A AS+A LE GM+VH  +V+A  
Sbjct: 311 ISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACL 370

Query: 476 DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDL 535
           + DVVV +AL+DMY+KCG +  A   F+ M   N  SWN+MISGY+ HG   E LK+F  
Sbjct: 371 ESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFAN 430

Query: 536 MQQRGWR-PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
           M+  G   P+++TFVGVLSACS+ GLLE+G  +F+SM  +YG+ P IEH++ M  LLGRA
Sbjct: 431 MKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRA 490

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN--NVEIGRLSAQHILDFEPEDEATHVL 652
           G LDK    I+ +P +P+V+IWR +LGAC   N    E+G+ +A+ +   EPE+   +VL
Sbjct: 491 GELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVL 550

Query: 653 LSNIYAMARSWE---KA--------ASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGM 701
           L N+YA    WE   KA          KE G SW+  +  VH F AGD SH D ++I   
Sbjct: 551 LGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDTDVIYKK 610

Query: 702 LEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSS-PIRIIK 760
           L+ LN K R AGY+P     L D+ ++ KE  L  HSEKLA+AF L     S+ PIRI+K
Sbjct: 611 LKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMK 670

Query: 761 NLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQ 795
           NLR+C DCH+A K ISKI  R+II+RD +R+   Q
Sbjct: 671 NLRVCGDCHSAFKYISKIEGRQIILRDSNRYEDHQ 705



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 151/519 (29%), Positives = 243/519 (46%), Gaps = 61/519 (11%)

Query: 72  LQTAMTIHCQVLKKGNCLDLFAT--NVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTI 129
           L+    +H  V+  G  +D      N L+N+Y K   + DA ++F  M E++++S+ + I
Sbjct: 49  LKKGREVHGHVITTG-LVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMI 107

Query: 130 QGYTVSSQFVEAVGLFSTLHREGHELNPFAFT--AFLKVLVSMGWAELCPCVFACVYKLG 187
            G   +  F+EAV  + ++ R  HE+ P +FT  + L    S+ WA+L   +     KLG
Sbjct: 108 TGLDQNGCFIEAVERYQSMRR--HEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLG 165

Query: 188 HDSNAFVGTALIDAFSVCGCVEFARKVFDGL-----------------FNDCFEEALNFF 230
            D N  V  AL+  ++  G +   RK+F  +                       EA+  F
Sbjct: 166 IDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACF 225

Query: 231 SQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKS 290
                 G K N  TF+ VL A   L    + K  HG ALK     +     AL+  Y K 
Sbjct: 226 LNALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKC 285

Query: 291 GEISNARRIFEEMP-KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSV 349
           GE+    +IF  M  ++D + W+ MI+ Y   +L   A++L   M Q     + F + +V
Sbjct: 286 GEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATV 345

Query: 350 LQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNH 409
           L A A++  L+ G ++H+  VR  L SDV V +AL+D+Y+KCGR++ ++  F   P RN 
Sbjct: 346 LSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNS 405

Query: 410 VTWNTMIVGYVQLGEVGKAMIMFSKM-LEEQVPATEVTYSSVLRACASLAALEPGMQVHC 468
            +WN+MI GY + G+  +A+ +F+ M L+ Q P   VT+  VL AC+    LE G + H 
Sbjct: 406 YSWNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFK-HF 464

Query: 469 LTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAE 528
            ++  +Y +   + +                  F  M D              + G + E
Sbjct: 465 ESMSDSYGLAPRIEH------------------FSCMAD--------------LLGRAGE 492

Query: 529 VLKVFDLMQQRGWRPNNLTFVGVLSAC--SNGGLLEQGE 565
           + K+ D + +   +PN L +  VL AC  +NG   E G+
Sbjct: 493 LDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKAELGK 531



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 186/418 (44%), Gaps = 28/418 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
            S +  +SL SC      +    IH + LK G  L++  +N L+ +Y +   L +  K+F
Sbjct: 134 GSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIF 193

Query: 115 DEMPERNTISFVTTIQGYTVSSQ-FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
             MPE + +S+ + I     S +   EAV  F    R G +LN   F++ L  + S+ + 
Sbjct: 194 SSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFG 253

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL--------------- 218
           EL   +     K      A    ALI  +  CG ++   K+F  +               
Sbjct: 254 ELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISG 313

Query: 219 --FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
              N+   +AL+    M   G + ++F +A VL A   + T+      H C+++ C E D
Sbjct: 314 YIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESD 373

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR- 335
           + V  AL+D+Y+K G +  A R F  MP ++   W+ MI+ YA+     +A++LF  M+ 
Sbjct: 374 VVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANMKL 433

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
                P+  TFV VL AC+    L+ G     S+    GL   +   + + D+  + G +
Sbjct: 434 DGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGEL 493

Query: 395 ENSVELFAESP-KRNHVTWNTMIVGYVQL----GEVGKAMIMFSKMLEEQVPATEVTY 447
           +   +   + P K N + W T++    +      E+GK     ++ML +  P   V Y
Sbjct: 494 DKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKAELGKKA---AEMLFQLEPENAVNY 548



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 157/312 (50%), Gaps = 12/312 (3%)

Query: 326 DAVELFCRMRQAF-VAPNQFTFVSVLQA-----CATMEGLDLGNQIHSLVVRVGLLS-DV 378
           +A +LF  M     V+P   ++V +L +      A   GL  G ++H  V+  GL+   V
Sbjct: 12  EATKLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEQVGLKKGREVHGHVITTGLVDFMV 69

Query: 379 FVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE 438
            + N L+++YAKCG + ++  +F    +++ V+WN+MI G  Q G   +A+  +  M   
Sbjct: 70  GIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMITGLDQNGCFIEAVERYQSMRRH 129

Query: 439 QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDA 498
           ++     T  S L +CASL   + G Q+H  ++K   D++V V+NAL+ +YA+ G + + 
Sbjct: 130 EILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNEC 189

Query: 499 RLVFDMMNDWNEVSWNAMISGYSMHGLS-AEVLKVFDLMQQRGWRPNNLTFVGVLSACSN 557
           R +F  M + ++VSWN++I   +    S  E +  F    + G + N +TF  VLSA S+
Sbjct: 190 RKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSS 249

Query: 558 GGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWR 617
               E G+     +   Y I        ++++  G+ G +D   K+   +  +   + W 
Sbjct: 250 LSFGELGKQ-IHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWN 308

Query: 618 ALLGACIIHNNV 629
           +++    IHN +
Sbjct: 309 SMISG-YIHNEL 319


>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
 gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
          Length = 785

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 270/785 (34%), Positives = 408/785 (51%), Gaps = 42/785 (5%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLN-RLP-DATKLFDE 116
           Y   L+SC     L     +H  + +      LF  N LL  Y +L    P  A +L DE
Sbjct: 5   YLDLLRSCTA---LPHVAAVHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAARLIDE 61

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHRE-GHELNPFAFTAFLKVLVSMGWAEL 175
           MP RN +S+   I  Y+ +     A+  F+      G  ++ F + A L           
Sbjct: 62  MPRRNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLRT 121

Query: 176 CPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG----------------LF 219
              V A     G  +  F+  +L   ++ CG +  AR+VFD                 + 
Sbjct: 122 GKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVR 181

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL-GLDTIR-VAKSAHGCALKTCYEMDL 277
               EE L  FS M   G   N+F    ++K C  G D  R +A++ HGC +K   + DL
Sbjct: 182 AGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDADL 241

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQ------TDLSIDAVELF 331
           ++A A++D+Y K G ++NA  +F+ +P  +VI ++ MIA + +       ++S +A+ L+
Sbjct: 242 FLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLY 301

Query: 332 CRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC 391
             M+   + P++FTF S+L+AC        G QIH  V++     D ++ +AL+D+Y+  
Sbjct: 302 SEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDS 361

Query: 392 GRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVL 451
           G ME+    F   PK++ VTW +MI G VQ     KA+ +F + +   +     T SSV+
Sbjct: 362 GCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMSSVM 421

Query: 452 RACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEV 511
            ACASLA    G Q+ CL +K  ++    + N+ I M A+ G +      F  M   + V
Sbjct: 422 NACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEMESRDVV 481

Query: 512 SWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSM 571
           SW+A+IS ++ HG + + L++F+ M      PN +TF+ VL+ACS+GGL++ G  Y++ M
Sbjct: 482 SWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYYEIM 541

Query: 572 VANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEI 631
              YG+ P I+H T +V LLGRAG L  A   I    F    ++WR+LL +C IH ++E 
Sbjct: 542 KNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMER 601

Query: 632 GRLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQG 680
           G+L A  I+D EP   A++V+L N+Y  A              E+   KEPGLSWIE + 
Sbjct: 602 GQLVADQIMDLEPTSSASYVILYNMYLDAGELSLASKTRDLMKERGVKKEPGLSWIELRS 661

Query: 681 MVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEK 740
            VH F AGD SH + N I   L  +  K  K     + S     +   E +  +  HSEK
Sbjct: 662 GVHSFVAGDKSHPESNAIYKKLAEMLSKIEKLANTDNASTGSDGISSSE-QNLVGCHSEK 720

Query: 741 LALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCS 800
           +A+AF +  +P S+PIR++KNLR+C DCH+ +K+IS    REII+RD  RFHHF+ G CS
Sbjct: 721 IAVAFGMIHLPQSAPIRVMKNLRVCRDCHSTMKLISGSENREIILRDGIRFHHFRGGSCS 780

Query: 801 CGDFW 805
           CGD+W
Sbjct: 781 CGDYW 785



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 131/494 (26%), Positives = 243/494 (49%), Gaps = 28/494 (5%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +YA +L +C +  DL+T   +H   +  G    +F +N L ++Y     + +A ++FD  
Sbjct: 105 TYAAALAACSRALDLRTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAA 164

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG--WAEL 175
            E + +S+ + + GY  +    E + +FS +   G   N FA  + +K   S       +
Sbjct: 165 EEHDDVSWNSLLSGYVRAGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHI 224

Query: 176 CPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG-------LFN-------- 220
              V  CV K G D++ F+ +A+ID ++  G +  A  +F         +FN        
Sbjct: 225 AEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCR 284

Query: 221 -------DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY 273
                  +   EAL+ +S+M++ G +P+ FTF+ +L+AC         K  HG  LK  +
Sbjct: 285 DEAAVGKEVSREALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSF 344

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
             D Y+  AL+DLY+ SG + +  R F  +PK+D++ W+ MI+   Q +L   A+ LF  
Sbjct: 345 HDDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQE 404

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
                + P+ FT  SV+ ACA++     G QI  L ++ G      + N+ + + A+ G 
Sbjct: 405 SICYGLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGD 464

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           ++     F E   R+ V+W+ +I  + Q G    A+ +F++M+  +V   EVT+ +VL A
Sbjct: 465 VDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTA 524

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANA--LIDMYAKCGSITDAR-LVFDMMNDWNE 510
           C+    ++ G++ + + +K  Y +   + +   ++D+  + G + DA   + D     + 
Sbjct: 525 CSHGGLVDDGLRYYEI-MKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDA 583

Query: 511 VSWNAMISGYSMHG 524
           V W ++++   +HG
Sbjct: 584 VVWRSLLASCRIHG 597


>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
 gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
          Length = 650

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 237/541 (43%), Positives = 329/541 (60%), Gaps = 17/541 (3%)

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTD-LSIDAVELFCRMR 335
           ++V+ +L+ +Y K G + +A R+F+ MP+++V+ W+ ++A  A  D    +A+     M 
Sbjct: 115 IFVSNSLVSMYAKFGLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMW 174

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
           +  VAPN +TF SVL AC T   L     +H+  V+VGL SDVFV ++L+D Y K G ++
Sbjct: 175 RDGVAPNAYTFSSVLGACGTPGVL---AALHASTVKVGLDSDVFVRSSLIDAYMKLGDLD 231

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
               +F E   R+ V WN++I G+ Q G+   A+ +F +M +    A + T +SVLRAC 
Sbjct: 232 GGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACT 291

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
            +  LE G QVH   +K  Y+ D+++ NAL+DMY KCGS+ DA  +F  M   + +SW+ 
Sbjct: 292 GMVMLEAGRQVHAHVLK--YERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWST 349

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           MISG + +G SAE L+VFDLM+  G  PN +T VGVL ACS+ GL+E G  YF+SM   +
Sbjct: 350 MISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLF 409

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS 635
           GI+P  EH+  MV LLGRAG LD+A + I  +  +P  +IWR LLGAC +H +  +   +
Sbjct: 410 GIQPEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKSGNLAAYA 469

Query: 636 AQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHY 684
           A+ IL  EP+D+   VLLSN YA  R W           ++   KEPG SWIE +  VH 
Sbjct: 470 AREILKLEPDDQGARVLLSNTYADLRQWTDAEKSWKAMRDRGMKKEPGRSWIELEKHVHV 529

Query: 685 FRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALA 744
           F AGD SH   + I   L  L  +    GY+P    VL+D+  ++KE  L  HSEK+A+A
Sbjct: 530 FIAGDLSHPCSDTIVQELNRLIGRISALGYVPQTEFVLQDLAIEQKEDLLKYHSEKMAIA 589

Query: 745 FALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
           F         PIRI+KNLRIC DCH   K++SK   R IIIRD  RFHHFQDG CSCGD+
Sbjct: 590 FGTMHAVGGKPIRIMKNLRICGDCHAFAKLVSKSEGRMIIIRDPVRFHHFQDGACSCGDY 649

Query: 805 W 805
           W
Sbjct: 650 W 650



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 198/396 (50%), Gaps = 34/396 (8%)

Query: 156 NPFAFTAFLKVLVSMGWAELCPCVFACV--------YKLGHDSNAFVGTALIDAFSVCGC 207
           +P + T  +K+ V  G A     +   V        Y  G     FV  +L+  ++  G 
Sbjct: 71  DPVSLTRLVKLCVRHGTAGDGRLIHRHVEAHGQLSHYSGGAGGGIFVSNSLVSMYAKFGL 130

Query: 208 VEFARKVFDGL-----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLK 250
           ++ A ++FD +                  +   EEAL F   M   G  PN +TF+ VL 
Sbjct: 131 LDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWRDGVAPNAYTFSSVLG 190

Query: 251 ACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIP 310
           AC    T  V  + H   +K   + D++V  +L+D Y K G++   RR+F+EM  +D++ 
Sbjct: 191 AC---GTPGVLAALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRDLVV 247

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV 370
           W+ +IA +AQ+   + A+ELF RM+ A  + NQ T  SVL+AC  M  L+ G Q+H+ V+
Sbjct: 248 WNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEAGRQVHAHVL 307

Query: 371 RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMI 430
           +     D+ + NAL+D+Y KCG +E++  LF   P+R+ ++W+TMI G  Q G+  +A+ 
Sbjct: 308 KYE--RDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGLAQNGKSAEALR 365

Query: 431 MFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA--NALIDM 488
           +F  M  E V    +T   VL AC+    +E G   +  ++K  + +       N ++D+
Sbjct: 366 VFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGW-YYFRSMKKLFGIQPEREHHNCMVDL 424

Query: 489 YAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
             + G + +A   + DM  + + V W  ++    MH
Sbjct: 425 LGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMH 460



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 107/345 (31%), Positives = 177/345 (51%), Gaps = 24/345 (6%)

Query: 91  LFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGY-TVSSQFVEAVGLFSTLH 149
           +F +N L+++Y K   L DA +LFD MPERN +++ T +        +  EA+     + 
Sbjct: 115 IFVSNSLVSMYAKFGLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMW 174

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
           R+G   N + F++   VL + G   +   + A   K+G DS+ FV ++LIDA+   G ++
Sbjct: 175 RDGVAPNAYTFSS---VLGACGTPGVLAALHASTVKVGLDSDVFVRSSLIDAYMKLGDLD 231

Query: 210 FARKVFDGLFND----------CFEE------ALNFFSQMRAVGFKPNNFTFAFVLKACL 253
             R+VFD +              F +      A+  F +M+  GF  N  T   VL+AC 
Sbjct: 232 GGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACT 291

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSF 313
           G+  +   +  H   LK  YE DL +  ALLD+Y K G + +A  +F  MP++DVI WS 
Sbjct: 292 GMVMLEAGRQVHAHVLK--YERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWST 349

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRV 372
           MI+  AQ   S +A+ +F  M+   VAPN+ T V VL AC+    ++ G     S+    
Sbjct: 350 MISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLF 409

Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVELFAE-SPKRNHVTWNTMI 416
           G+  +    N ++D+  + G+++ +VE   + + + + V W T++
Sbjct: 410 GIQPEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLL 454



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 95/214 (44%), Gaps = 21/214 (9%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N++++++ L +C     L     +H   +K G   D+F  + L++ Y+KL  L    ++F
Sbjct: 181 NAYTFSSVLGACGTPGVLAA---LHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVF 237

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           DEM  R+ + + + I G+  S   V A+ LF  +   G   N    T+ L+    M   E
Sbjct: 238 DEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLE 297

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF---------------DGLF 219
               V A V K  ++ +  +  AL+D +  CG +E A  +F                GL 
Sbjct: 298 AGRQVHAHVLK--YERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGLA 355

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKAC 252
            N    EAL  F  M++ G  PN  T   VL AC
Sbjct: 356 QNGKSAEALRVFDLMKSEGVAPNRITMVGVLFAC 389



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 55/123 (44%), Gaps = 7/123 (5%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +  + L++C     L+    +H  VLK     DL   N LL++Y K   L DA  LF
Sbjct: 279 NQGTLTSVLRACTGMVMLEAGRQVHAHVLKYER--DLILHNALLDMYCKCGSLEDAEALF 336

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFL-----KVLVS 169
             MP+R+ IS+ T I G   + +  EA+ +F  +  EG   N       L       LV 
Sbjct: 337 HRMPQRDVISWSTMISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVE 396

Query: 170 MGW 172
            GW
Sbjct: 397 DGW 399


>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
          Length = 787

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 255/646 (39%), Positives = 361/646 (55%), Gaps = 29/646 (4%)

Query: 187 GHDSNAFVGTALIDAFSVCGCVEFARKVFDG-------LFNDCF-----EEALNFFSQMR 234
           G+ ++ FV +AL   +      + ARKVFD        L+N         EAL  F +M 
Sbjct: 144 GYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLPGSEALEAFVRMV 203

Query: 235 AVG-FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
             G  +P++ T A  L+A      + + +  HG  +K       +V   L+ LY+K G++
Sbjct: 204 DAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDM 263

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
            +A+ +F+ M   D++ ++ +I+ Y+   +   +VELF  +  +   PN  T V+V+   
Sbjct: 264 DSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVY 323

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
           +      L   +H+ VV+  L +D  VS AL  +Y +   ME++  +F    ++   +WN
Sbjct: 324 SPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWN 383

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
            MI GY Q G    A+ +F  M E  V    +T SS L ACA L AL  G  VH +  K 
Sbjct: 384 AMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKE 443

Query: 474 NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVF 533
             +++V V  ALIDMYAKCGSI +AR +FD M++ N VSWNAMISGY +HG  AE LK++
Sbjct: 444 KLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLY 503

Query: 534 DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGR 593
             M      P + TF+ V+ ACS+GGL+++G+  F+ M   Y I P IEH T MV LLGR
Sbjct: 504 KDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGR 563

Query: 594 AGHLDKAAKLIEGIP---FQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATH 650
           AG L++A +LI   P     P V  W ALLGAC++H N ++ +L++Q + + + E+   +
Sbjct: 564 AGKLNEALELISEFPQSAIGPGV--WGALLGACMVHKNSDLAKLASQKLFELDSENAGYY 621

Query: 651 VLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIR 699
           VLLSN+Y   + + +AA            K PG + IE     H F AGD  H     I 
Sbjct: 622 VLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIEIGDRPHVFMAGDHLHPQSEAIY 681

Query: 700 GMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRII 759
             LE L  K  +AGY P   A L DV E+EKE  + VHSEKLA+AF L    P + IRII
Sbjct: 682 SYLERLTAKMIEAGYQPVTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIRII 741

Query: 760 KNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           KNLR+C+DCH A K ISK+ QR I++RD  RFHHF+DG CSCGD+W
Sbjct: 742 KNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 131/480 (27%), Positives = 231/480 (48%), Gaps = 32/480 (6%)

Query: 68  QNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVT 127
           + +D   A T+H   +  G   D F  + L  +Y KL+R  DA K+FD +P  +TI + T
Sbjct: 126 RGNDAAAARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNT 185

Query: 128 TIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFT--AFLKVLVSMGWAELCPCVFACVYK 185
            + G   S    EA+  F  +   G  + P + T  + L+         +  CV     K
Sbjct: 186 LLAGLPGS----EALEAFVRMVDAG-RVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVK 240

Query: 186 LGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNF 229
            G   +  V T L+  +S CG ++ A+ +FD +                 N   E ++  
Sbjct: 241 CGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVEL 300

Query: 230 FSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK 289
           F ++ A G++PN+ T   V+          +A+  H   +K   + D  V+ AL  LY +
Sbjct: 301 FKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCR 360

Query: 290 SGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSV 349
             ++ +AR IF+ M +K +  W+ MI+ YAQ  L+  AV LF  M++  V PN  T  S 
Sbjct: 361 LNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISST 420

Query: 350 LQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNH 409
           L ACA +  L LG  +H ++ +  L  +V+V  AL+D+YAKCG +  +  +F     +N 
Sbjct: 421 LSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNV 480

Query: 410 VTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV-HC 468
           V+WN MI GY   G+  +A+ ++  ML+ ++  T  T+ SV+ AC+    ++ G +V   
Sbjct: 481 VSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRV 540

Query: 469 LTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS-----WNAMISGYSMH 523
           +T +      +     ++D+  + G + +A    ++++++ + +     W A++    +H
Sbjct: 541 MTNEYRITPGIEHCTCMVDLLGRAGKLNEA---LELISEFPQSAIGPGVWGALLGACMVH 597



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 195/395 (49%), Gaps = 12/395 (3%)

Query: 240 PNNFTFAFVLKACLGLDTIR-----VAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
           P++F+FAF   +     + R      A++ HG ++   Y  D +VA AL  LY K     
Sbjct: 107 PDSFSFAFAATSLSSSCSSRGNDAAAARTLHGLSVAAGYAADTFVASALAKLYFKLSRGD 166

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA-FVAPNQFTFVSVLQAC 353
           +AR++F+ +P  D I W+ ++A    +    +A+E F RM  A  V P+  T  S L+A 
Sbjct: 167 DARKVFDTVPSPDTILWNTLLAGLPGS----EALEAFVRMVDAGRVRPDSTTLASSLRAA 222

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
           A    + +G  +H   V+ GL     V   LM +Y+KCG M+++  LF      + V +N
Sbjct: 223 AEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYN 282

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
            +I GY   G V  ++ +F ++          T  +V+   +          +H   VKA
Sbjct: 283 ALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKA 342

Query: 474 NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVF 533
             D D +V+ AL  +Y +   +  AR +FD M +    SWNAMISGY+ +GL+   + +F
Sbjct: 343 RLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALF 402

Query: 534 DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGR 593
            LMQ+   +PN +T    LSAC++ G L  G+ +   +++   +E  +   T+++ +  +
Sbjct: 403 QLMQELNVQPNPITISSTLSACAHLGALSLGK-WVHRIISKEKLELNVYVMTALIDMYAK 461

Query: 594 AGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
            G + +A  + + +    +V+ W A++    +H  
Sbjct: 462 CGSIAEARSIFDRMD-NKNVVSWNAMISGYGLHGQ 495



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 170/369 (46%), Gaps = 17/369 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +S + A+SL++  +   +     +H   +K G          L+++Y K   +  A  LF
Sbjct: 211 DSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLF 270

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D M   + +++   I GY+V+     +V LF  L   G   N     A + V    G   
Sbjct: 271 DRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHEL 330

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
           L  C+ A V K   D++A V TAL   +     +E AR +FD +                
Sbjct: 331 LARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYA 390

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            N   E A+  F  M+ +  +PN  T +  L AC  L  + + K  H    K   E+++Y
Sbjct: 391 QNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVY 450

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V  AL+D+Y K G I+ AR IF+ M  K+V+ W+ MI+ Y       +A++L+  M  A 
Sbjct: 451 VMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDMLDAR 510

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVV-RVGLLSDVFVSNALMDVYAKCGRMENS 397
           + P   TF+SV+ AC+    +D G ++  ++     +   +     ++D+  + G++  +
Sbjct: 511 ILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAGKLNEA 570

Query: 398 VELFAESPK 406
           +EL +E P+
Sbjct: 571 LELISEFPQ 579


>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
          Length = 694

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 240/594 (40%), Positives = 344/594 (57%), Gaps = 14/594 (2%)

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDT-IRVAKSAHGCALKTCY-EMDLYVAVAL 283
           AL+ F+ M  +G +PN+FTF    KA         +    H  A++  Y  +D +V+ A 
Sbjct: 101 ALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAA 160

Query: 284 LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
           LD+Y K+G +  AR +F EMP ++V+ W+ ++         ++ +E +  +R+A   PN 
Sbjct: 161 LDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNV 220

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
            +  +   ACA    L LG Q H  VV+ G   DV V N+++D Y KC     +  +F  
Sbjct: 221 VSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDG 280

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
              RN V+W +M+  Y Q G   +A   +          T+   SS L  CA L  L  G
Sbjct: 281 MGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLG 340

Query: 464 MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMH 523
             +H + V++  D ++ VA+AL+DMY KCG + DA  +F      N V+WNAMI GY+  
Sbjct: 341 RALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHI 400

Query: 524 GLSAEVLKVFDLMQQRG-WRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
           G +   L VFD M + G   PN +T V V+++CS GGL + G   F++M   +GIEP  E
Sbjct: 401 GDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTE 460

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDF 642
           HY  +V LLGRAG  ++A ++I+G+P +PS+ +W ALLGAC +H   E+GR++A+ + + 
Sbjct: 461 HYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFEL 520

Query: 643 EPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTS 691
           +P+D   HVLLSN++A A  W +A             K+PG SW+  + +VH FRA DT 
Sbjct: 521 DPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTK 580

Query: 692 HADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMP 751
           H   N I+ +L  L  + + AGY+PD    L D+ E+EKE  ++ HSEKLALAF L  +P
Sbjct: 581 HEMYNEIQALLSKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLICIP 640

Query: 752 PSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           P  PIRI+KNLRICVDCH A K IS IV REII+RD +RFHHF+   CSCGD+W
Sbjct: 641 PGVPIRIMKNLRICVDCHRAFKFISGIVGREIIVRDNNRFHHFKQYQCSCGDYW 694



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 129/508 (25%), Positives = 233/508 (45%), Gaps = 32/508 (6%)

Query: 60  ATSLQSCIQNDDLQTAMTIHCQVLKK-GNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           A + +S I +   +     H + L+     L  F    L+N+Y KL+    A       P
Sbjct: 19  AAAFESAIASRSPRLGRAAHARALRLIAPALSPFICAHLVNLYSKLDLPAAAAAALASDP 78

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG-WAELCP 177
               +S+   I G     + + A+  F+ + R G   N F F +  K   S    + + P
Sbjct: 79  HPTVVSYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGP 138

Query: 178 CVFACVYKLGH-DSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFE------------ 224
            + +   + G+   + FV  A +D +   G ++ AR +F  + N                
Sbjct: 139 QIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLD 198

Query: 225 ----EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
               E +  +  +R  G  PN  +      AC G   + + +  HG  +K  +EMD+ V 
Sbjct: 199 GRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVL 258

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
            +++D Y K      AR +F+ M  ++ + W  M+A YAQ     +A   +   R++   
Sbjct: 259 NSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEE 318

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           P  F   S L  CA + GL LG  +H++ VR  + +++FV++AL+D+Y KCG +E++ ++
Sbjct: 319 PTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQI 378

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE-QVPATEVTYSSVLRACASLAA 459
           F E+P+RN VTWN MI GY  +G+   A+++F  M+   +     +T  +V+ +C+    
Sbjct: 379 FYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGL 438

Query: 460 LEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDARLVFDMMNDWNEVS-WNAM 516
            + G ++   T++  + ++    +   ++D+  + G    A  V   M     +S W A+
Sbjct: 439 TKDGYELF-ETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGAL 497

Query: 517 ISGYSMHG------LSAEVLKVFDLMQQ 538
           +    MHG      ++AE  K+F+L  Q
Sbjct: 498 LGACKMHGKTELGRIAAE--KLFELDPQ 523



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 511 VSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKS 570
           VS+ A ISG + HG     L  F  M + G RPN+ TF     A ++            S
Sbjct: 83  VSYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHS 142

Query: 571 MVANYGIEPCIEHYTSMVSL--LGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
           +   +G  P ++ + S  +L    + G L  A  L   +P + +V+ W A++
Sbjct: 143 LAIRFGYLP-VDPFVSCAALDMYFKTGRLKLARHLFGEMPNR-NVVAWNAVM 192


>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
 gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 635

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 223/569 (39%), Positives = 347/569 (60%), Gaps = 11/569 (1%)

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
           +L+ C     +  AK+ HG  ++   E D+ +   L++ Y+K G +  AR++F+ M ++ 
Sbjct: 67  ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
           ++ W+ MI  Y +  +  +A+++F  MR      ++FT  SVL AC          ++H 
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186

Query: 368 LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK 427
           L V+  +  +++V  AL+D+YAKCG ++++V++F     ++ VTW++M+ GYVQ     +
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246

Query: 428 AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALID 487
           A++++ +     +   + T SSV+ AC++LAAL  G Q+H +  K+ +  +V VA++ +D
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 306

Query: 488 MYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLT 547
           MYAKCGS+ ++ ++F  + + N   WN +ISG++ H    EV+ +F+ MQQ G  PN +T
Sbjct: 307 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 366

Query: 548 FVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGI 607
           F  +LS C + GL+E+G  +FK M   YG+ P + HY+ MV +LGRAG L +A +LI+ I
Sbjct: 367 FSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI 426

Query: 608 PFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA 667
           PF P+  IW +LL +C ++ N+E+  ++A+ + + EPE+   HVLLSNIYA  + WE+ A
Sbjct: 427 PFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIA 486

Query: 668 -----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIP 716
                       K  G SWI+ +  VH F  G++ H  +  I   L+ L +K RK GY P
Sbjct: 487 KSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKP 546

Query: 717 DLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIIS 776
            +   L DV   +KE  L  HSEKLAL F L  +P SSP+RI+KNLRICVDCH  +K  S
Sbjct: 547 SVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAAS 606

Query: 777 KIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
              +R II+RDV+RFHHF DG CSCGDFW
Sbjct: 607 MATRRFIIVRDVNRFHHFSDGHCSCGDFW 635



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/411 (26%), Positives = 195/411 (47%), Gaps = 22/411 (5%)

Query: 12  CKQLTHQSKINAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDD 71
           CK L  +S  ++  R +S  A+   ++ S     P  +S    N +     LQ C +N  
Sbjct: 22  CKVLPRRSNTSSLSRNISVLASYDQEEVS-----PGRYSNEFSNRNLVHEILQLCARNGA 76

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
           +  A   H ++++     D+   NVL+N Y K   +  A ++FD M ER+ +S+ T I  
Sbjct: 77  VMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGL 136

Query: 132 YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSN 191
           YT +    EA+ +F  +  EG + + F  ++ L        A  C  +     K   D N
Sbjct: 137 YTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLN 196

Query: 192 AFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRA 235
            +VGTAL+D ++ CG ++ A +VF+ +                 N  +EEAL  + + + 
Sbjct: 197 LYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQR 256

Query: 236 VGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISN 295
           +  + N FT + V+ AC  L  +   K  H    K+ +  +++VA + +D+Y K G +  
Sbjct: 257 MSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRE 316

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACAT 355
           +  IF E+ +K++  W+ +I+ +A+     + + LF +M+Q  + PN+ TF S+L  C  
Sbjct: 317 SYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGH 376

Query: 356 MEGLDLGNQIHSLV-VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
              ++ G +   L+    GL  +V   + ++D+  + G +  + EL    P
Sbjct: 377 TGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIP 427


>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
          Length = 630

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 227/540 (42%), Positives = 334/540 (61%), Gaps = 16/540 (2%)

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           +++   L+++Y K   +++A ++F++MP+++VI W+ MI+ Y++  +   A+EL   M +
Sbjct: 96  MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             V PN +T+ SVL++C  M  + +   +H  +++ GL SDVFV +AL+DV+AK G  E+
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPED 212

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           ++ +F E    + + WN++I G+ Q      A+ +F +M      A + T +SVLRAC  
Sbjct: 213 ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTG 272

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           LA LE GMQ H   VK  YD D+++ NAL+DMY KCGS+ DA  VF+ M + + ++W+ M
Sbjct: 273 LALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTM 330

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           ISG + +G S E LK+F+ M+  G +PN +T VGVL ACS+ GLLE G  YF+SM   YG
Sbjct: 331 ISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYG 390

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
           I+P  EHY  M+ LLG+AG LD A KL+  +  +P  + WR LLGAC +  N+ +   +A
Sbjct: 391 IDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAA 450

Query: 637 QHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYF 685
           + ++  +PED  T+ LLSNIYA ++ W           ++   KEPG SWIE    +H F
Sbjct: 451 KKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAF 510

Query: 686 RAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAF 745
             GD SH  +  +   L  L  +    GY+P+ + VL+D+  ++ E  L  HSEKLALAF
Sbjct: 511 IIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAF 570

Query: 746 ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            L  +P    IRI KNLRIC DCH   K+ SK+  R I+IR   R+HHFQDG CSCGD+W
Sbjct: 571 GLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRGPIRYHHFQDGKCSCGDYW 630



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 121/380 (31%), Positives = 193/380 (50%), Gaps = 23/380 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +S +Y+  ++ CI N  +     I   +   G+   +F  NVL+N+YVK N L DA +LF
Sbjct: 60  DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D+MP+RN IS+ T I  Y+      +A+ L   + R+    N + +++ L+    M    
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVR 179

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
           +  C    + K G +S+ FV +ALID F+  G  E A  VFD +                
Sbjct: 180 MLHC---GIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFA 236

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            N   + AL  F +M+  GF     T   VL+AC GL  + +   AH   +K  Y+ DL 
Sbjct: 237 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLI 294

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           +  AL+D+Y K G + +A R+F +M ++DVI WS MI+  AQ   S +A++LF RM+ + 
Sbjct: 295 LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSG 354

Query: 339 VAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
             PN  T V VL AC+    L+ G     S+    G+         ++D+  K G+++++
Sbjct: 355 TKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDA 414

Query: 398 VELFAESP-KRNHVTWNTMI 416
           V+L  E   + + VTW T++
Sbjct: 415 VKLLNEMECEPDAVTWRTLL 434



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 13/203 (6%)

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV-VA 482
           ++ +AM     +    + A   TYS +++ C S  A+  G  + C  +  N    ++ + 
Sbjct: 41  DLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLI-CRHLYFNGHRPMMFLV 99

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
           N LI+MY K   + DA  +FD M   N +SW  MIS YS   +  + L++  LM +   R
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159

Query: 543 PNNLTFVGVLSAC---SNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDK 599
           PN  T+  VL +C   S+  +L  G       +   G+E  +   ++++ +  + G  + 
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRMLHCG-------IIKEGLESDVFVRSALIDVFAKLGEPED 212

Query: 600 AAKLIEGIPFQPSVMIWRALLGA 622
           A  + + +      ++W +++G 
Sbjct: 213 ALSVFDEM-VTGDAIVWNSIIGG 234


>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 674

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 232/618 (37%), Positives = 355/618 (57%), Gaps = 35/618 (5%)

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
              +L  F+ +R+ G  P+   F  +L+A        +A+S H   ++  +  DLY A A
Sbjct: 57  LRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAAVIRLGFHFDLYTANA 116

Query: 283 LLDLYTK----------------------SGEISNARRIFEEMPKKDVIPWSFMIARYAQ 320
           L+++Y+K                      S +I + R++F+ MP +DV+ W+ +IA  AQ
Sbjct: 117 LMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPVRDVVSWNTVIAGNAQ 176

Query: 321 TDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFV 380
             +  +A+ +   M +  + P+ FT  S+L        +  G +IH   +R G   DVF+
Sbjct: 177 NGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFI 236

Query: 381 SNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQV 440
            ++L+D+YAKC ++E SV  F     R+ ++WN++I G VQ G   + +  F +ML+E+V
Sbjct: 237 GSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKV 296

Query: 441 PATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARL 500
              +V++SSV+ ACA L AL  G Q+H   ++  +D +  +A++L+DMYAKCG+I  AR 
Sbjct: 297 KPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARY 356

Query: 501 VFDM--MNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNG 558
           +F+   M D + VSW A+I G +MHG + + + +F+ M   G +P  + F+ VL+ACS+ 
Sbjct: 357 IFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHA 416

Query: 559 GLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRA 618
           GL+++G  YF SM  ++G+ P +EHY ++  LLGRAG L++A   I  +  +P+  +W  
Sbjct: 417 GLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNMGEEPTGSVWST 476

Query: 619 LLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA----------- 667
           LL AC  H N+E+       IL  +P +   HV++SNIY+ A+ W  AA           
Sbjct: 477 LLAACRAHKNIELAEKVVNKILLVDPGNMGAHVIMSNIYSAAQRWRDAAKLRVRMRKTGL 536

Query: 668 SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVRE 727
            K P  SWIE    VH F AGD SH   + I   L  L  +  K GY+ D + VL DV E
Sbjct: 537 KKTPACSWIEVGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTNEVLHDVDE 596

Query: 728 DEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRD 787
           + K   L  HSE+LA+AF +      + IR+IKN+R+CVDCHTAIK ++KIV REII+RD
Sbjct: 597 EHKRDLLRTHSERLAIAFGIISTTSGTTIRVIKNIRVCVDCHTAIKFMAKIVGREIIVRD 656

Query: 788 VHRFHHFQDGCCSCGDFW 805
             RFHHF++G CSCGD+W
Sbjct: 657 NSRFHHFKNGSCSCGDYW 674



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/413 (25%), Positives = 186/413 (45%), Gaps = 47/413 (11%)

Query: 48  TFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVK---- 103
           +F +S  + H + + L++         A ++H  V++ G   DL+  N L+N+Y K    
Sbjct: 69  SFGISP-DRHLFPSLLRASTLFKHFNLAQSLHAAVIRLGFHFDLYTANALMNMYSKFHPH 127

Query: 104 ---LNRLPDAT---------------KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLF 145
              L+  P A                KLFD MP R+ +S+ T I G   +  + EA+ + 
Sbjct: 128 LSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMV 187

Query: 146 STLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVC 205
             + +E    + F  ++ L +            +     + G D + F+G++LID ++ C
Sbjct: 188 KEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKC 247

Query: 206 GCVEFARKVFDGLFN-----------DC-----FEEALNFFSQMRAVGFKPNNFTFAFVL 249
             VE +   F  L N            C     F++ L FF +M     KP   +F+ V+
Sbjct: 248 TQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVI 307

Query: 250 KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE--EMPKKD 307
            AC  L  + + K  H   ++  ++ + ++A +LLD+Y K G I  AR IF   EM  +D
Sbjct: 308 PACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRD 367

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQIH 366
           ++ W+ +I   A    ++DAV LF  M    V P    F++VL AC+    +D G    +
Sbjct: 368 MVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFN 427

Query: 367 SLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA---ESPKRNHVTWNTMI 416
           S+    G+   +    A+ D+  + GR+E + +  +   E P  +   W+T++
Sbjct: 428 SMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNMGEEPTGS--VWSTLL 478



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 177/383 (46%), Gaps = 40/383 (10%)

Query: 121 NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVF 180
           ++++++  I+ Y        ++  F+ L   G   +   F + L+         L   + 
Sbjct: 40  HSLAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLH 99

Query: 181 ACVYKLGHDSNAFVGTALIDAFS-----VCGCVEF-----------------ARKVFDGL 218
           A V +LG   + +   AL++ +S     +    EF                  RK+FD +
Sbjct: 100 AAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRM 159

Query: 219 ----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAK 262
                            N  +EEALN   +M     +P++FT + +L        +   K
Sbjct: 160 PVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGK 219

Query: 263 SAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTD 322
             HG A++  ++ D+++  +L+D+Y K  ++  +   F  +  +D I W+ +IA   Q  
Sbjct: 220 EIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNG 279

Query: 323 LSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSN 382
                +  F RM +  V P Q +F SV+ ACA +  L+LG Q+H+ ++R+G   + F+++
Sbjct: 280 RFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIAS 339

Query: 383 ALMDVYAKCGRMENSVELF--AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQV 440
           +L+D+YAKCG ++ +  +F   E   R+ V+W  +I+G    G    A+ +F +ML + V
Sbjct: 340 SLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGV 399

Query: 441 PATEVTYSSVLRACASLAALEPG 463
               V + +VL AC+    ++ G
Sbjct: 400 KPCYVAFMAVLTACSHAGLVDEG 422



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/343 (24%), Positives = 168/343 (48%), Gaps = 24/343 (6%)

Query: 309 IPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSL 368
           + W  +I  YA   L   ++  F  +R   ++P++  F S+L+A    +  +L   +H+ 
Sbjct: 42  LAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAA 101

Query: 369 VVRVGLLSDVFVSNALMDVYAK----------------------CGRMENSVELFAESPK 406
           V+R+G   D++ +NALM++Y+K                        ++++  +LF   P 
Sbjct: 102 VIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPV 161

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
           R+ V+WNT+I G  Q G   +A+ M  +M +E +     T SS+L      A +  G ++
Sbjct: 162 RDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEI 221

Query: 467 HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLS 526
           H   ++  +D DV + ++LIDMYAKC  +  +   F ++++ + +SWN++I+G   +G  
Sbjct: 222 HGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRF 281

Query: 527 AEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTS 586
            + L  F  M +   +P  ++F  V+ AC++   L  G+    + +   G +      +S
Sbjct: 282 DQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQ-LHAYIIRLGFDDNKFIASS 340

Query: 587 MVSLLGRAGHLDKAAKLIEGIPFQPSVMI-WRALLGACIIHNN 628
           ++ +  + G++  A  +   I      M+ W A++  C +H +
Sbjct: 341 LLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGH 383



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/244 (20%), Positives = 106/244 (43%), Gaps = 26/244 (10%)

Query: 27  GLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKG 86
           G+  +A    ++       P +F++S          L    ++ ++     IH   ++ G
Sbjct: 178 GMYEEALNMVKEMGKENLRPDSFTLSSI--------LPIFTEHANVTKGKEIHGYAIRHG 229

Query: 87  NCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFS 146
              D+F  + L+++Y K  ++  +   F  +  R+ IS+ + I G   + +F + +G F 
Sbjct: 230 FDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFR 289

Query: 147 TLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCG 206
            + +E  +    +F++ +     +    L   + A + +LG D N F+ ++L+D ++ CG
Sbjct: 290 RMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCG 349

Query: 207 CVEFARKVFDGL------------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFV 248
            ++ AR +F+ +                   +    +A++ F +M   G KP    F  V
Sbjct: 350 NIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAV 409

Query: 249 LKAC 252
           L AC
Sbjct: 410 LTAC 413


>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
 gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
          Length = 818

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 271/814 (33%), Positives = 419/814 (51%), Gaps = 70/814 (8%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           ++ T L SC    D+     +H ++       D    N L+++Y K + L DA  +F+ M
Sbjct: 9   TFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESM 68

Query: 118 P--ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAEL 175
              +RN +S+   I  Y  +    EA+ L+  ++ +G   +   F + L    S+     
Sbjct: 69  DWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQGRE 128

Query: 176 CPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF---------------- 219
              +   V+  G DS   +  AL+  ++  G V  A+++F  L                 
Sbjct: 129 ---IHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQ 185

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           +  +  AL  F +M+    KPN+ T+  V+      + +   +  H   +   ++ DL V
Sbjct: 186 SGDWSGALRIFKEMK-CDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVV 244

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
           A AL+++Y K G    AR +F++M K+D++ W+ MI  Y       +A+EL+ ++     
Sbjct: 245 ATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGF 304

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
              + TFVS+L AC++++ L  G  +HS ++  GL S+V V+ AL+++YAKCG +E + +
Sbjct: 305 KRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARK 364

Query: 400 LFAESPKRNHV----------------------------------TWNTMIVGYVQLGEV 425
           +F     R+ V                                  +WN MI  YVQ G  
Sbjct: 365 VFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCA 424

Query: 426 GKAMIMFSKML-EEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA 484
             AM +F +M     +    VT+ +VL ACASL  L     +H    ++  + +VVV N 
Sbjct: 425 VAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNT 484

Query: 485 LIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPN 544
           LI+MYA+CGS+ +A  +F    +   VSW AM++ +S +G  AE L +F  M   G +P+
Sbjct: 485 LINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPD 544

Query: 545 NLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLI 604
           ++T+  +L  C++GG LEQG  YF  M   + + P  +H+ +MV LLGR+G L  A +L+
Sbjct: 545 DVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELL 604

Query: 605 EGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE 664
           E +PF+P  + W   L AC IH  +E+G  +A+ + + +P   A ++ +SNIYA    WE
Sbjct: 605 ESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWE 664

Query: 665 KAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAG 713
           K AS           K PGLS+IE  G +H F +G   H   + I   L  L+   R AG
Sbjct: 665 KVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAG 724

Query: 714 YIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSS-PIRIIKNLRICVDCHTAI 772
           Y+PD  AVL DV E EKE  L  HSEK+A+AF L     S  PIR++KNLR+C DCHTA 
Sbjct: 725 YVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTAT 784

Query: 773 KIISKIVQREIIIRDVHRFHHF-QDGCCSCGDFW 805
           K I++I  R+II+RD +RFH F  DG CSCGD+W
Sbjct: 785 KFIARIAGRDIIVRDCNRFHRFSSDGKCSCGDYW 818



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 187/430 (43%), Gaps = 62/430 (14%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           NS +Y   +      + L     IH +++  G   DL     L+N+Y K     +A ++F
Sbjct: 206 NSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVF 265

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D+M +R+ +S+   I  Y ++  F EA+ L+  L  EG +     F + L    S+    
Sbjct: 266 DKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALA 325

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
               V + + + G DS   V TAL++ ++ CG +E ARKVF+ +                
Sbjct: 326 QGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYA 385

Query: 220 -----------------------------------NDCFEEALNFFSQMR-AVGFKPNNF 243
                                              N C   A+  F +M  A G KP+  
Sbjct: 386 SNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAV 445

Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
           TF  VL+AC  L  +   K+ H    ++  E ++ V   L+++Y + G +  A R+F   
Sbjct: 446 TFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAA 505

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
            +K V+ W+ M+A ++Q     +A++LF  M    V P+  T+ S+L  C     L+ G 
Sbjct: 506 KEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGW 565

Query: 364 QIHSLVVRVGLL---SDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMIV-- 417
           +  + +  +  L   +D F   A++D+  + GR+ ++ EL    P + + V W T +   
Sbjct: 566 RYFTDMAELHALAPTADHFA--AMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTAC 623

Query: 418 ---GYVQLGE 424
              G ++LGE
Sbjct: 624 RIHGKLELGE 633



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 177/363 (48%), Gaps = 42/363 (11%)

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           P+  TF++VL +C++   +  G  +H  +       D  V NAL+ +Y KC  + ++  +
Sbjct: 5   PDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64

Query: 401 FA--ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
           F   +  +RN V+WN MI  Y Q G   +A++++ +M  + +    VT+ SVL AC+SLA
Sbjct: 65  FESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLA 124

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
               G ++H     +  D    +ANAL+ MYA+ GS+ DA+ +F  +   +E SWNA+I 
Sbjct: 125 ---QGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVIL 181

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
            +S  G  +  L++F  M+    +PN+ T++ V+S  S   +L +G      +VAN G +
Sbjct: 182 AHSQSGDWSGALRIFKEMKC-DVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVAN-GFD 239

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIP------------------------------ 608
             +   T+++++ G+ G   +A ++ + +                               
Sbjct: 240 TDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKL 299

Query: 609 ----FQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDE-ATHVLLSNIYAMARSW 663
               F+ +   + ++LGAC     +  GRL   HIL+   + E A    L N+YA   S 
Sbjct: 300 DMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSL 359

Query: 664 EKA 666
           E+A
Sbjct: 360 EEA 362


>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 740

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 259/791 (32%), Positives = 393/791 (49%), Gaps = 94/791 (11%)

Query: 56  SHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFD 115
           S+ Y+  ++ CI     +    IH  +++     + F  N +++ Y  +     A ++FD
Sbjct: 3   SNYYSAQIKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFD 62

Query: 116 EMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAEL 175
            +P+ N  S+   +  Y+ S    E    F  L                           
Sbjct: 63  GIPQPNLFSWNNLLLAYSKSGHLSEMERTFEKLP-------------------------- 96

Query: 176 CPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRA 235
                        D +      LI+ +S+ G V  A K ++ +  D       F S +  
Sbjct: 97  -------------DRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKD-------FSSNLTR 136

Query: 236 VGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISN 295
           V       T   +LK       + + K  HG  +K  +E  L V   LLD+Y+K G IS+
Sbjct: 137 V-------TLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISD 189

Query: 296 ARRIFEEMP------------------------------KKDVIPWSFMIARYAQTDLSI 325
           A+++F  +                               +KD + WS MI   AQ  +  
Sbjct: 190 AKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEK 249

Query: 326 DAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALM 385
           +A+E F  M+   +  +Q+ F SVL AC  +  ++ G QIH+ ++R  L   ++V +AL+
Sbjct: 250 EAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALI 309

Query: 386 DVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEV 445
           D+Y KC  +  +  +F    ++N V+W  M+VGY Q G  G+A+ +F  M    +     
Sbjct: 310 DMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHY 369

Query: 446 TYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMM 505
           T    + ACA++++LE G Q H   + A     + V+N+L+ +Y KCG I D+  +F+ M
Sbjct: 370 TLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEM 429

Query: 506 NDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE 565
           N  +EVSW AM+S Y+  G + E +++FD M Q G +P+ +T  GV+SACS  GL+E+G+
Sbjct: 430 NVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQ 489

Query: 566 AYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACII 625
            YF+ M+  YGI P   HY+ M+ L  R+G +++A   I G+PF+P  + W  LL AC  
Sbjct: 490 RYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRN 549

Query: 626 HNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLS 674
             N+EIG+ +A+ +++ +P   A + LLS+IYA    W           EK   KEPG S
Sbjct: 550 KGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEPGQS 609

Query: 675 WIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYL 734
           WI+ +G +H F A D S    + I   LE L  K    GY PD S V  DV E  K + L
Sbjct: 610 WIKWKGKLHSFSADDESSPYSDQIYAKLEELYQKIIDNGYKPDTSFVHHDVEEAVKIKML 669

Query: 735 WVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHF 794
             HSE+LA+AF L  +P   PIR+ KNLR+CVDCH A K IS +  REI++RD  RFH F
Sbjct: 670 NCHSERLAIAFGLIFVPSGLPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRF 729

Query: 795 QDGCCSCGDFW 805
           +DG CSCGDFW
Sbjct: 730 KDGTCSCGDFW 740



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/293 (19%), Positives = 115/293 (39%), Gaps = 40/293 (13%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           + + + + + L +C     +     IH  +++      ++  + L+++Y K   L  A  
Sbjct: 264 KMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKT 323

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +FD M ++N +S+   + GY  + +  EAV +F  + R G + + +     +    ++  
Sbjct: 324 VFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISS 383

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------------- 218
            E            G      V  +L+  +  CG ++ + ++F+ +              
Sbjct: 384 LEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSA 443

Query: 219 ---FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
              F     EA+  F +M  +G KP+  T   V+ AC          S  G   K     
Sbjct: 444 YAQFGRAV-EAIQLFDKMVQLGLKPDGVTLTGVISAC----------SRAGLVEKGQRYF 492

Query: 276 DLYVA-----------VALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
           +L +              ++DL+++SG I  A      MP + D I W+ +++
Sbjct: 493 ELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLS 545


>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 665

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 222/561 (39%), Positives = 336/561 (59%), Gaps = 12/561 (2%)

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
           +LK C     +   +  H   L++ +  D+ +   LL++Y K G +  AR++FE+MP++D
Sbjct: 66  LLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRD 125

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
            + W+ +I+ Y+Q D   DA+  F +M +   +PN+FT  SV++A A       G+Q+H 
Sbjct: 126 FVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHG 185

Query: 368 LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK 427
             V+ G  S+V V +AL+D+Y + G M+++  +F     RN V+WN +I G+ +     K
Sbjct: 186 FCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEK 245

Query: 428 AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALID 487
           A+ +F  ML +    +  +Y+S+  AC+S   LE G  VH   +K+   +     N L+D
Sbjct: 246 ALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLD 305

Query: 488 MYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLT 547
           MYAK GSI DAR +FD +   + VSWN++++ Y+ HG   E +  F+ M++ G RPN ++
Sbjct: 306 MYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEIS 365

Query: 548 FVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGI 607
           F+ VL+ACS+ GLL++G  Y++ M  + GI P   HY ++V LLGRAG L++A + IE +
Sbjct: 366 FLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEM 424

Query: 608 PFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA 667
           P +P+  IW+ALL AC +H N E+G  +A+H+ + +P+D   HV+L NIYA    W  AA
Sbjct: 425 PIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAA 484

Query: 668 -----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIP 716
                       KEP  SW+E +  +H F A D  H     I    E +  K ++ GY+P
Sbjct: 485 RVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVP 544

Query: 717 DLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIIS 776
           D S V+  V + E+E  L  HSEK+ALAFAL   PP S I I KN+R+C DCHTAIK+ S
Sbjct: 545 DTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLAS 604

Query: 777 KIVQREIIIRDVHRFHHFQDG 797
           K+V REII+RD +RFHHF+D 
Sbjct: 605 KVVGREIIVRDTNRFHHFKDA 625



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 186/367 (50%), Gaps = 24/367 (6%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           Y T L+ C     L     +H  +L+     D+   N LLN+Y K   L +A K+F++MP
Sbjct: 63  YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
           +R+ +++ T I GY+   +  +A+  F+ + R G+  N F  ++ +K       AE   C
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAA----AERRGC 178

Query: 179 ----VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL--FNDC---------- 222
               +     K G DSN  VG+AL+D ++  G ++ A+ VFD L   ND           
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238

Query: 223 ----FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                E+AL  F  M   GF+P++F++A +  AC     +   K  H   +K+  ++  +
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 298

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
               LLD+Y KSG I +AR+IF+ + K+DV+ W+ ++  YAQ     +AV  F  MR+  
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG 358

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           + PN+ +F+SVL AC+    LD G   + L+ + G++ + +    ++D+  + G +  ++
Sbjct: 359 IRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRAL 418

Query: 399 ELFAESP 405
               E P
Sbjct: 419 RFIEEMP 425



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 168/293 (57%), Gaps = 2/293 (0%)

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           +  +++  ++  + ++L+ C   + L  G  +H+ +++     D+ + N L+++YAKCG 
Sbjct: 51  LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           +E + ++F + P+R+ VTW T+I GY Q      A++ F++ML       E T SSV++A
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
            A+      G Q+H   VK  +D +V V +AL+D+Y + G + DA+LVFD +   N+VSW
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 230

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA 573
           NA+I+G++    + + L++F  M + G+RP++ ++  +  ACS+ G LEQG+     M+ 
Sbjct: 231 NALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK 290

Query: 574 NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH 626
           + G +       +++ +  ++G +  A K+ + +  +  V+ W +LL A   H
Sbjct: 291 S-GEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQH 341



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 107/265 (40%), Gaps = 32/265 (12%)

Query: 49  FSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLP 108
           F  S F   SYA+   +C     L+    +H  ++K G  L  FA N LL++Y K   + 
Sbjct: 258 FRPSHF---SYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIH 314

Query: 109 DATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLV 168
           DA K+FD + +R+ +S+ + +  Y       EAV  F  + R G   N  +F + L    
Sbjct: 315 DARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACS 374

Query: 169 SMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALN 228
             G  +     +  + K G    A+    ++D     G +                 AL 
Sbjct: 375 HSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDL---------------NRALR 419

Query: 229 FFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAH--GCALKTCYEM---DLYVAVAL 283
           F  +M     +P    +  +L AC      R+ K+      A +  +E+   D    V L
Sbjct: 420 FIEEM---PIEPTAAIWKALLNAC------RMHKNTELGAYAAEHVFELDPDDPGPHVIL 470

Query: 284 LDLYTKSGEISNARRIFEEMPKKDV 308
            ++Y   G  ++A R+ ++M +  V
Sbjct: 471 YNIYASGGRWNDAARVRKKMKESGV 495


>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 773

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 253/749 (33%), Positives = 410/749 (54%), Gaps = 20/749 (2%)

Query: 75  AMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTV 134
           A  +H QVLK      L   ++LL++Y  +N L D+ +LF+ +     +++ + I+ YT 
Sbjct: 27  AQQLHAQVLK-FQASSLCNLSLLLSIYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTS 85

Query: 135 SSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFV 194
                +++G F  +   G   +   F + LK    +    L   +   + ++G D + + 
Sbjct: 86  HGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYT 145

Query: 195 GTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLG 254
           G AL++ +S    ++ + +   G  +   +E       +R       N            
Sbjct: 146 GNALMNMYSKLRFLKKSGRQRLGA-SQVLDEMTERTRSVRTASVLVGNQGRKVSDIEAFN 204

Query: 255 LDTIRVAKSAHGCALKTCY-------EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
            D    ++      L+  Y       EM+       +   + S  + + R+IFE MP+KD
Sbjct: 205 YDVSCRSREFEAQVLEIDYKPRSEYREMEACNLGQQIKDISHSMSVDSVRKIFEMMPEKD 264

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
           ++ W+ +IA  A+  L  + + +   M  A + P+ FT  SVL   A    +  G +IH 
Sbjct: 265 LVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHG 324

Query: 368 LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK 427
             +R GL ++V+V+++L+D+YAKC R+ +S  +F    +R+ ++WN++I G VQ G   +
Sbjct: 325 CSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDE 384

Query: 428 AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALID 487
            +  F +ML  ++     ++SS++ ACA L  L  G Q+H    +  +D ++ +A++L+D
Sbjct: 385 GLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVD 444

Query: 488 MYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLT 547
           MYAKCG+I  AR +FD M   + VSW AMI G ++HG + + +++F+ M+  G  PN + 
Sbjct: 445 MYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVA 504

Query: 548 FVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGI 607
           F+ VL+ACS+ GL+++   YF SM  ++GI P +EHY ++  LLGRAG L++A   I G+
Sbjct: 505 FMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGM 564

Query: 608 PFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA 667
           P  P+  +W  LL AC +H NV++    A  IL+ +P++   ++LL+NIY+ AR W++AA
Sbjct: 565 PIGPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGAYILLANIYSAARRWKEAA 624

Query: 668 S-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIP 716
                       K P  SWIE +  V+ F AGD SH     IR  +E L     K GY+P
Sbjct: 625 KWRASLRRTGIRKTPACSWIEVRNKVYAFMAGDESHPCYEKIREAMEVLMELMEKEGYVP 684

Query: 717 DLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIIS 776
           D S V  DV E++K+  +  HSE+LA+ F +   P  + IR+ KNLR+C DCHTA K IS
Sbjct: 685 DTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGTTIRVTKNLRVCTDCHTATKFIS 744

Query: 777 KIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           KIV REI++RD  RFHHF++G CSCGD+W
Sbjct: 745 KIVGREIVVRDNSRFHHFKNGTCSCGDYW 773



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 53/242 (21%), Positives = 108/242 (44%), Gaps = 24/242 (9%)

Query: 27  GLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKG 86
           GL  +     ++   +   P +F++S        + L    +N D+     IH   +++G
Sbjct: 279 GLYGETLTMVREMGGANLKPDSFTLS--------SVLPLIAENVDISKGKEIHGCSIRQG 330

Query: 87  NCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFS 146
              +++  + L+++Y K  R+ D+ ++F  + ER+ IS+ + I G   +  F E +  F 
Sbjct: 331 LDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFR 390

Query: 147 TLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCG 206
            +     +   ++F++ +     +    L   +   + + G D N F+ ++L+D ++ CG
Sbjct: 391 QMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCG 450

Query: 207 CVEFARKVFDGL-FNDCFE---------------EALNFFSQMRAVGFKPNNFTFAFVLK 250
            +  AR++FD +   D                  +A+  F QM+  G +PN   F  VL 
Sbjct: 451 NIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLT 510

Query: 251 AC 252
           AC
Sbjct: 511 AC 512



 Score = 40.4 bits (93), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 1/125 (0%)

Query: 442 ATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLV 501
           +TE   +S+LR   S+ +     Q+H   +K      +   + L+ +Y+    + D+  +
Sbjct: 6   STEALVNSLLRNPLSIKSRSQAQQLHAQVLKFQ-ASSLCNLSLLLSIYSHINLLHDSLRL 64

Query: 502 FDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLL 561
           F+ ++    ++W ++I  Y+ HGL  + L  F  M   G  P++  F  VL AC+    L
Sbjct: 65  FNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDL 124

Query: 562 EQGEA 566
             GE+
Sbjct: 125 NLGES 129


>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
 gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
          Length = 605

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 239/599 (39%), Positives = 350/599 (58%), Gaps = 14/599 (2%)

Query: 220 NDCFEEALNFFSQMRAVGFKP--NNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
           N CFE+++  F  M  +G  P  +  T   VL A   L  +++       A+K  +   +
Sbjct: 8   NSCFEDSIRVFGDM-VLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKCGFYSHV 66

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
            +   L+ L++K GE+  AR +F E+ KKD+I  + MI+ +     + D+V LF  +  +
Sbjct: 67  SLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLFKELLSS 126

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
               +  T V ++   +      L N IH   V++G++S   VS AL  VY +   M  +
Sbjct: 127 GERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFA 186

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
            +LF ES ++   +WN MI G  Q G    A+ +F  M +  V    VT +S+L ACA +
Sbjct: 187 RQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQI 246

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
            AL  G  VH L     ++ +V V+ ALIDMYAKCGSIT AR +FD+M + NEV+WNAMI
Sbjct: 247 GALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEVTWNAMI 306

Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
           SGY +HG   E LK+F  M     +P  LTF+ VL ACS+ GL+++G+  F +MV ++G 
Sbjct: 307 SGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDFGF 366

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQ 637
           EP  EHY  MV +LGRAG L KA + I+ +P +P   +W ALLGAC+IH +  +  ++++
Sbjct: 367 EPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIHKDTNLAHVASE 426

Query: 638 HILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFR 686
            + + +PE+   +VL+SNIY++ R + +AAS           K PG + IE   + H F 
Sbjct: 427 KLFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKTPGCTLIEIGQVPHVFT 486

Query: 687 AGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFA 746
           +GD SH     I   L+ L  K  +AG+  + + VL D+ E+EKE  + VHSEKLA+AF 
Sbjct: 487 SGDQSHPQSKAIYAELDKLTGKMTEAGFQTETTTVLHDLEEEEKELTMKVHSEKLAIAFG 546

Query: 747 LFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           L    P + IRIIKNLR+C+DCH   K +SKI +R I++RD +RFHHF+DG CSCGD+W
Sbjct: 547 LISTEPGAEIRIIKNLRVCLDCHNWTKFLSKITKRVIVVRDANRFHHFKDGLCSCGDYW 605



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 169/360 (46%), Gaps = 17/360 (4%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L +  +  +L+  M I C  +K G    +     L++++ K   +  A  LF E+ +++ 
Sbjct: 38  LPAVAELQELKLGMQILCLAIKCGFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDL 97

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           IS    I G+T + +  ++V LF  L   G  ++       + V    G + LC C+   
Sbjct: 98  ISCNAMISGFTCNGETEDSVRLFKELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGF 157

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-----------GLFNDCFEE-----A 226
             KLG  S++ V TAL   +     + FAR++FD            + + C +      A
Sbjct: 158 CVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAA 217

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           ++ F  M+     PN  T   +L AC  +  + + +  H       +E ++YV+ AL+D+
Sbjct: 218 ISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDM 277

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y K G I+ AR +F+ MP+K+ + W+ MI+ Y       +A++LF  M  + V P   TF
Sbjct: 278 YAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTF 337

Query: 347 VSVLQACATMEGLDLGNQI-HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           +SVL AC+    +  G+ I H++V   G          ++D+  + G+++ ++E     P
Sbjct: 338 LSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMP 397



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 123/301 (40%), Gaps = 35/301 (11%)

Query: 35  STQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFAT 94
           S ++ S+ST   +    S F  HSY   L +CI    ++  +  H  V           +
Sbjct: 126 SGERVSSSTIVGLIPVYSPFG-HSY---LCNCIHGFCVKLGIVSHSSV-----------S 170

Query: 95  NVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHE 154
             L  VY +LN +  A +LFDE  E+   S+   I G T +     A+ LF T+ +    
Sbjct: 171 TALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVN 230

Query: 155 LNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKV 214
            NP   T+ L     +G   L   V + +     +SN +V TALID ++ CG +  AR++
Sbjct: 231 PNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVAREL 290

Query: 215 FD-----------------GLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDT 257
           FD                 GL     +EAL  F  M +   KP   TF  VL AC     
Sbjct: 291 FDLMPEKNEVTWNAMISGYGLHGHG-QEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGL 349

Query: 258 IRVAKSA-HGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIP-WSFMI 315
           ++      H       +E        ++D+  ++G++  A    + MP +   P W  ++
Sbjct: 350 VKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALL 409

Query: 316 A 316
            
Sbjct: 410 G 410


>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g26782, mitochondrial; Flags: Precursor
 gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 239/604 (39%), Positives = 347/604 (57%), Gaps = 26/604 (4%)

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           EAL  FS MR +   P   +F   +KAC  L  I   K  H  A    Y+ D++V+ AL+
Sbjct: 59  EALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALI 118

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ- 343
            +Y+  G++ +AR++F+E+PK++++ W+ MI  Y     ++DAV LF   +   V  N  
Sbjct: 119 VMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLF---KDLLVDENDD 175

Query: 344 --------FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
                      VSV+ AC+ +    L   IHS V++ G    V V N L+D YAK G   
Sbjct: 176 DDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGG 235

Query: 396 NSV--ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPA-TEVTYSSVLR 452
            +V  ++F +   ++ V++N+++  Y Q G   +A  +F ++++ +V     +T S+VL 
Sbjct: 236 VAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLL 295

Query: 453 ACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS 512
           A +   AL  G  +H   ++   + DV+V  ++IDMY KCG +  AR  FD M + N  S
Sbjct: 296 AVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRS 355

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
           W AMI+GY MHG +A+ L++F  M   G RPN +TFV VL+ACS+ GL  +G  +F +M 
Sbjct: 356 WTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMK 415

Query: 573 ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIG 632
             +G+EP +EHY  MV LLGRAG L KA  LI+ +  +P  +IW +LL AC IH NVE+ 
Sbjct: 416 GRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELA 475

Query: 633 RLSAQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGM 681
            +S   + + +  +   ++LLS+IYA A  W+           +   K PG S +E  G 
Sbjct: 476 EISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGE 535

Query: 682 VHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKL 741
           VH F  GD  H     I   L  LN K  +AGY+ + S+V  DV E+EKE  L VHSEKL
Sbjct: 536 VHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKL 595

Query: 742 ALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSC 801
           A+AF +    P S + ++KNLR+C DCH  IK+ISKIV RE ++RD  RFHHF+DG CSC
Sbjct: 596 AIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSC 655

Query: 802 GDFW 805
           GD+W
Sbjct: 656 GDYW 659



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 188/362 (51%), Gaps = 12/362 (3%)

Query: 277 LYVAVALLDLYTKSGEISNARRIFEE-MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
           L+ +V+ L    +  E  N   +F   + K DV  W+ +IA  A++  S +A+  F  MR
Sbjct: 9   LFCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMR 68

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
           +  + P + +F   ++AC+++  +  G Q H      G  SD+FVS+AL+ +Y+ CG++E
Sbjct: 69  KLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLE 128

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTY------SS 449
           ++ ++F E PKRN V+W +MI GY   G    A+ +F  +L ++    +  +       S
Sbjct: 129 DARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVS 188

Query: 450 VLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKC--GSITDARLVFDMMND 507
           V+ AC+ + A      +H   +K  +D  V V N L+D YAK   G +  AR +FD + D
Sbjct: 189 VISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVD 248

Query: 508 WNEVSWNAMISGYSMHGLSAEVLKVF-DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEA 566
            + VS+N+++S Y+  G+S E  +VF  L++ +    N +T   VL A S+ G L  G+ 
Sbjct: 249 KDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKC 308

Query: 567 YFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH 626
                V   G+E  +   TS++ +  + G ++ A K  + +    +V  W A++    +H
Sbjct: 309 -IHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMK-NKNVRSWTAMIAGYGMH 366

Query: 627 NN 628
            +
Sbjct: 367 GH 368



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/411 (26%), Positives = 190/411 (46%), Gaps = 44/411 (10%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           S+  ++++C    D+ +    H Q    G   D+F ++ L+ +Y    +L DA K+FDE+
Sbjct: 78  SFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEI 137

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHE------LNPFAFTAFLKVLVSMG 171
           P+RN +S+ + I+GY ++   ++AV LF  L  + ++      L+     + +     + 
Sbjct: 138 PKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVP 197

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVC--GCVEFARKVFD------------- 216
              L   + + V K G D    VG  L+DA++    G V  ARK+FD             
Sbjct: 198 AKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSI 257

Query: 217 -------GLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCAL 269
                  G+ N+ F E      + + V F  N  T + VL A      +R+ K  H   +
Sbjct: 258 MSVYAQSGMSNEAF-EVFRRLVKNKVVTF--NAITLSTVLLAVSHSGALRIGKCIHDQVI 314

Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVE 329
           +   E D+ V  +++D+Y K G +  AR+ F+ M  K+V  W+ MIA Y     +  A+E
Sbjct: 315 RMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALE 374

Query: 330 LFCRMRQAFVAPNQFTFVSVLQACA----TMEGLDLGNQIHSLVVRVGLLSDVFVSNALM 385
           LF  M  + V PN  TFVSVL AC+     +EG    N +     R G+   +     ++
Sbjct: 375 LFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKG---RFGVEPGLEHYGCMV 431

Query: 386 DVYAKCGRMENSVELFAESP-KRNHVTWNTMIVG-----YVQLGEVGKAMI 430
           D+  + G ++ + +L      K + + W++++        V+L E+  A +
Sbjct: 432 DLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARL 482



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 53/114 (46%)

Query: 51  VSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDA 110
           V  FN+ + +T L +   +  L+    IH QV++ G   D+     ++++Y K  R+  A
Sbjct: 282 VVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETA 341

Query: 111 TKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFL 164
            K FD M  +N  S+   I GY +     +A+ LF  +   G   N   F + L
Sbjct: 342 RKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395


>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 615

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 222/595 (37%), Positives = 353/595 (59%), Gaps = 12/595 (2%)

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
           CF   L   S M   G       +   + AC+    +   +  H   +   Y   +++  
Sbjct: 22  CFVAPLRAASGMALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGT 81

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
            L+ +Y + G + +AR + + MP++ V+ W+ MI+ Y+QT+  ++A++LF +M +A   P
Sbjct: 82  RLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIP 141

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           N++T  +VL +C+  + +  G Q+HSL+V+    S +FV ++L+D+YAK   ++ +  +F
Sbjct: 142 NEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVF 201

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
              P+R+ V+   +I GY Q G   +A+ +F ++  E +    VT+++++ A + LA+L+
Sbjct: 202 DTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLD 261

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
            G QVH L ++      V + N+LIDMY+KCG +  +R VFD M + + VSWNAM+ GY 
Sbjct: 262 YGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYG 321

Query: 522 MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
            HGL  EV+ +F  + +   +P+++T + VLS CS+GGL+++G   F ++V         
Sbjct: 322 RHGLGHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHT 380

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
            HY  ++ LLGR+G L+KA  LIE +PF+ +  IW +LLGAC +H NV +G L AQ +L+
Sbjct: 381 GHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLE 440

Query: 642 FEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDT 690
            EPE+   +V+LSNIYA A  W           EK  +KEPG SWI    ++H F + + 
Sbjct: 441 MEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSER 500

Query: 691 SHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKM 750
            H     I   ++ + +  + AG++PDLS VL DV +++KER L  HSEKLA+ F L   
Sbjct: 501 FHPSKKDINAKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNT 560

Query: 751 PPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           PP   IR++KNLRICVDCH   K +SK+ +REI +RD +RFH    G C+CGD+W
Sbjct: 561 PPGLTIRVMKNLRICVDCHNFAKFVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 615



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 191/403 (47%), Gaps = 25/403 (6%)

Query: 25  LRGLSAQAALSTQQC---SNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQ 81
           LR  +A   L+ Q+C        + +    +    H Y  ++ +CI+   L     +H +
Sbjct: 8   LRPEAAARGLALQRCFVAPLRAASGMALPGASARFHEYEAAITACIERRALWEGRQVHAR 67

Query: 82  VLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEA 141
           ++       +F    L+ +YV+   L DA  + D MPER+ +S+ T I GY+ + + VEA
Sbjct: 68  MITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEA 127

Query: 142 VGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDA 201
           + LF  + R G   N +     L              V + + K   +S+ FVG++L+D 
Sbjct: 128 LDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDM 187

Query: 202 FSVCGCVEFARKVFDGLFN----DCF------------EEALNFFSQMRAVGFKPNNFTF 245
           ++    ++ AR+VFD L       C             EEAL+ F Q+ + G + N+ TF
Sbjct: 188 YAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTF 247

Query: 246 AFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV--ALLDLYTKSGEISNARRIFEEM 303
             ++ A  GL ++   K  H   L+   E+  +VA+  +L+D+Y+K G++  +RR+F+ M
Sbjct: 248 TTLVTALSGLASLDYGKQVHALILRK--ELPFFVALQNSLIDMYSKCGKLLYSRRVFDNM 305

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
            ++ V+ W+ M+  Y +  L  + + LF  + +  V P+  T ++VL  C+    +D G 
Sbjct: 306 LERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGL 364

Query: 364 QIHSLVVR-VGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
            I   VV+    L        ++D+  + GR+E ++ L    P
Sbjct: 365 DIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMP 407


>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
 gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
          Length = 600

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 223/575 (38%), Positives = 341/575 (59%), Gaps = 13/575 (2%)

Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
           T+  +LK C     +   K  H C +K  Y  D  +A  L+++Y K G I+ AR +F+++
Sbjct: 26  TYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQI 85

Query: 304 PKK--DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL 361
            +K  DVI W+ +I  Y Q  L  +A+ LF  M    V  NQ T ++ + ACA++   + 
Sbjct: 86  QEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEE 145

Query: 362 GNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQ 421
           G  +H++ V   L SD  V  +L++++ KC  ++ +  +F   P++N VTWN M+  Y Q
Sbjct: 146 GRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQ 205

Query: 422 LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVV 481
             +  KA+ +F  M  E V    VT+ +++ ACA+LAA   G  VH     +   MDV +
Sbjct: 206 NWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVAL 265

Query: 482 ANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW 541
             A++  Y KCG + +AR +FD +   N V+W+A+++ Y+ +G   E ++++  M Q G 
Sbjct: 266 GTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGL 325

Query: 542 RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAA 601
             N +TF+G+L ACS+ G    G  YF SM+ ++G+ P  EHY +++ LLGR+G L  + 
Sbjct: 326 EVNGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQLSE 385

Query: 602 KLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAM-- 659
            LI  +P++P    W ALLGAC +H +V+ G   A+ I + +PED   ++LLSN+Y+   
Sbjct: 386 DLINSMPYEPDSSAWLALLGACRMHGDVDRGARIAELIYELDPEDSGPYILLSNLYSSTG 445

Query: 660 ----ARSWEKAA-----SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSR 710
               AR   KA      +K+PGLS IE +  VH F A    H  +  I   +E L  + +
Sbjct: 446 RMDEARRTRKAMRLRGITKQPGLSSIEVKDRVHEFMAAQKLHPQLGRIHAEIERLKARVK 505

Query: 711 KAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHT 770
           +AGY+ D+ AVLRDV E+EKE+ LW HSE+LA+AF L   PP + + I+KNLR+C DCH 
Sbjct: 506 EAGYVADVRAVLRDVEEEEKEQLLWYHSERLAIAFGLISTPPGTALHIVKNLRVCFDCHA 565

Query: 771 AIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           A+K ISK+V R+I++RD  RFHHF++G CSCGD+W
Sbjct: 566 AVKAISKVVGRKIVVRDAIRFHHFENGACSCGDYW 600



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 174/369 (47%), Gaps = 26/369 (7%)

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD----------------GLF--N 220
           V +C+ K G+ S+  +   LI+ +  CG +  AR VFD                G +  N
Sbjct: 46  VHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQIQEKNADVISWNGIIGAYTQN 105

Query: 221 DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
              +EAL+ F  M   G   N  T    + AC  L +    +  H  A+    E D  V 
Sbjct: 106 GLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEEGRIVHAIAVDKRLESDTMVG 165

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
            +L++++ K   +  AR +F+ +P+K+++ W+ M+A Y+Q      A+++F  M    V 
Sbjct: 166 TSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQCKKAIQVFRFMDLEGVQ 225

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           P+  TF++++ ACA +     G  +H  +   G+  DV +  A+M  Y KCGR++N+  +
Sbjct: 226 PDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVALGTAVMHFYGKCGRLDNARAI 285

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F    K+N VTW+ ++  Y Q G   +A+ ++ +M++  +    +T+  +L AC+     
Sbjct: 286 FDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGLEVNGITFLGLLFACSHAGRS 345

Query: 461 EPGMQVHCLTVKANYDMDVVVANA----LIDMYAKCGSIT-DARLVFDMMNDWNEVSWNA 515
             G+      ++   D  VV        LID+  + G +     L+  M  + +  +W A
Sbjct: 346 MDGVDYFVSMIR---DFGVVPVFEHYLNLIDLLGRSGQLQLSEDLINSMPYEPDSSAWLA 402

Query: 516 MISGYSMHG 524
           ++    MHG
Sbjct: 403 LLGACRMHG 411



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 171/370 (46%), Gaps = 25/370 (6%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +Y   L+ C  +  L     +H  ++K G   D    N+L+ +Y K   + +A  +FD++
Sbjct: 26  TYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQI 85

Query: 118 PERNT--ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAEL 175
            E+N   IS+   I  YT +    EA+ LF T+  EG   N       +    S+   E 
Sbjct: 86  QEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEE 145

Query: 176 CPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF----- 223
              V A       +S+  VGT+L++ F  C  V+ AR VFD L       +N+       
Sbjct: 146 GRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQ 205

Query: 224 ----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
               ++A+  F  M   G +P+  TF  ++ AC  L      +  H     +   MD+ +
Sbjct: 206 NWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVAL 265

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
             A++  Y K G + NAR IF+ + KK+ + WS ++A YAQ     +A+EL+  M Q  +
Sbjct: 266 GTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGL 325

Query: 340 APNQFTFVSVLQACA----TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
             N  TF+ +L AC+    +M+G+D      S++   G++        L+D+  + G+++
Sbjct: 326 EVNGITFLGLLFACSHAGRSMDGVDY---FVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQ 382

Query: 396 NSVELFAESP 405
            S +L    P
Sbjct: 383 LSEDLINSMP 392



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/362 (18%), Positives = 132/362 (36%), Gaps = 69/362 (19%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +   ++ +C      +    +H   + K    D      L+N++ K   +  A  +F
Sbjct: 126 NQVTLINAIDACASLPSEEEGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVF 185

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D +P +N +++   +  Y+ + Q  +A+ +F  +  EG + +   F   +    ++    
Sbjct: 186 DSLPRKNLVTWNNMVAVYSQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHT 245

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
               V   +   G   +  +GTA++  +  CG ++ AR +FD L                
Sbjct: 246 EGRMVHDDITASGIPMDVALGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYA 305

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            N    EA+  + +M   G + N  TF  +L AC         +S  G         D  
Sbjct: 306 QNGYETEAIELYHEMVQGGLEVNGITFLGLLFAC-----SHAGRSMDGVDYFVSMIRDFG 360

Query: 279 VA------VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFC 332
           V       + L+DL  +SG++  +  +   MP +                          
Sbjct: 361 VVPVFEHYLNLIDLLGRSGQLQLSEDLINSMPYE-------------------------- 394

Query: 333 RMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG--------LLSDVFVSNAL 384
                   P+   ++++L AC     +D G +I  L+  +         LLS+++ S   
Sbjct: 395 --------PDSSAWLALLGACRMHGDVDRGARIAELIYELDPEDSGPYILLSNLYSSTGR 446

Query: 385 MD 386
           MD
Sbjct: 447 MD 448



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/234 (21%), Positives = 98/234 (41%), Gaps = 34/234 (14%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           +H  +   G  +D+     +++ Y K  RL +A  +FD + ++NT+++   +  Y  +  
Sbjct: 250 VHDDITASGIPMDVALGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGY 309

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
             EA+ L+  + + G E+N   F   L               FAC +            +
Sbjct: 310 ETEAIELYHEMVQGGLEVNGITFLGLL---------------FACSHAGRSMDGVDYFVS 354

Query: 198 LIDAFSVCGCVEFARKVFDGLFN----DCFEEALNFFSQMRAVGFKPNNFTFAFVLKAC- 252
           +I  F V    E    + D L         E+ +N      ++ ++P++  +  +L AC 
Sbjct: 355 MIRDFGVVPVFEHYLNLIDLLGRSGQLQLSEDLIN------SMPYEPDSSAWLALLGACR 408

Query: 253 LGLDTIRVAKSAHGCALKTCYEMDLYVA---VALLDLYTKSGEISNARRIFEEM 303
           +  D  R A+ A     +  YE+D   +   + L +LY+ +G +  ARR  + M
Sbjct: 409 MHGDVDRGARIA-----ELIYELDPEDSGPYILLSNLYSSTGRMDEARRTRKAM 457


>gi|449451241|ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 274/848 (32%), Positives = 438/848 (51%), Gaps = 86/848 (10%)

Query: 42  STTTPITF--------SVSE--FNSHSYATSLQSCIQNDDL----------QTAMTIHCQ 81
           ++T+P  F        S+SE  F S S  TSL +     DL            A  +H Q
Sbjct: 63  NSTSPTQFFTSPQHLVSLSEPLFASRSLNTSLSTIASPFDLLRLSTRYGDPDLARAVHAQ 122

Query: 82  VLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEA 141
            LK     D+F  N L++ Y+KL  + DA K+F  +   N +S+   I G++ S    EA
Sbjct: 123 FLKLEE--DIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEA 180

Query: 142 VGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDA 201
           V LF  +   G E N + F A L   +     +L   V   V KLG  S  F+  AL+  
Sbjct: 181 VELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGL 240

Query: 202 FSVCGCVEFARKVFDGL-------FNDC---------FEEALNFFSQMRAV-GFKPNNFT 244
           +  CG ++   ++F+ +       +N           ++EA ++F  M+   G K ++F+
Sbjct: 241 YCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFS 300

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
            + +L AC G       +  H  ALK   E  L V+ +L+  YTK G  ++   +FE MP
Sbjct: 301 LSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMP 360

Query: 305 KKDVIPWSFMIARY-------------------------------AQTDLSIDAVELFCR 333
            +DVI W+ MI  Y                               ++ D    A+ELF  
Sbjct: 361 IRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIE 420

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           M +  V  +  T  S++ AC  ++   +  QI   V++ G+LS+  +  AL+D+Y +CGR
Sbjct: 421 MLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGR 480

Query: 394 MENSVELFAESPKRNHVT--WNTMIVGYVQLGEVGKAMIMF-SKMLEEQVPATEVTYSSV 450
           ME++ ++F +    N  T    +MI GY + G++ +A+ +F S   E  +   EV  +S+
Sbjct: 481 MEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSI 540

Query: 451 LRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE 510
           L  C S+   E G Q+HC  +K+    +  V NA + MY+KC ++ DA  VF+ MN  + 
Sbjct: 541 LSLCGSIGFHEMGKQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDI 600

Query: 511 VSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNG--GLLEQGEAYF 568
           VSWN +++G+ +H    + L ++  M++ G +P+++TF  ++SA  +    L++   + F
Sbjct: 601 VSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLF 660

Query: 569 KSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
            SM   + I+P +EHY S +S+LGR G L++A + I  +P +P V +WRALL +C I+ N
Sbjct: 661 VSMETEHNIKPTLEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKN 720

Query: 629 VEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIE 677
             + +L+A++IL  EP+D  +++L SN+Y+ +  W           EK   K P  SWI 
Sbjct: 721 ERLEKLAARNILAVEPKDPLSYILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQSWII 780

Query: 678 NQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVH 737
           ++  +H F A D SH     I   LE L ++  K GY+PD S VL++V E +K+ +L+ H
Sbjct: 781 HENKIHSFYARDRSHPQGKDIYSGLEILILECLKVGYVPDTSFVLQEVEERQKKEFLFYH 840

Query: 738 SEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDG 797
           S KLA  F +    P  PI+I+KN+R+C DCH  +K +S + +R+I++RD   FH F DG
Sbjct: 841 SGKLAATFGILMTKPGKPIQIVKNVRLCGDCHNFLKYVSIVTRRKILLRDTSGFHWFIDG 900

Query: 798 CCSCGDFW 805
            CSC D+W
Sbjct: 901 QCSCTDYW 908


>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 579

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 232/581 (39%), Positives = 349/581 (60%), Gaps = 16/581 (2%)

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           +++ G   ++ T++ ++K CL    +              ++  +++   L+++Y K   
Sbjct: 4   LQSHGLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNL 63

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           +++A ++F++MP+++VI W+ MI+ Y++  +   A+EL   M +  V PN +T+ SVL+A
Sbjct: 64  LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRA 123

Query: 353 CATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTW 412
           C  M  + +   +H  +++ GL SDV+V +AL+DV+AK G  E+++ +F E    + + W
Sbjct: 124 CNGMSDVRM---LHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVW 180

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
           N++I G+ Q      A+ +F +M      A + T +SVLRAC  LA LE GMQ H   VK
Sbjct: 181 NSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK 240

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
             YD D+++ NAL+DMY KCGS+ DAR VF+ M + + ++W+ MISG + +G S E LK+
Sbjct: 241 --YDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKL 298

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
           F+LM+  G +PN +T VGVL ACS+ GLLE G  YF+SM   YGI P  EHY  M+ LLG
Sbjct: 299 FELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHYGCMIDLLG 358

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVL 652
           +AG LD A KL+  +  +P  + WR LLGAC +  N+ +   +A+ ++  +PED  T+ +
Sbjct: 359 KAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTV 418

Query: 653 LSNIYAMARSWEK-----------AASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGM 701
           LSNIYA ++ W+               KEPG SWIE    +H F  GD SH  +  +   
Sbjct: 419 LSNIYANSQKWDSVEEIRKRMRDIGIKKEPGCSWIEVNKQIHAFIIGDESHPQIVEVNKK 478

Query: 702 LEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKN 761
           L  L  +    GY+P+ + VL+D+  ++ E  L  HSEKLALAF L  +P    IRI KN
Sbjct: 479 LNQLIHRLIGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPSEKVIRIRKN 538

Query: 762 LRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCG 802
           LRIC DCH   K+ SK+  R I+IRD  R+HHFQDG CSCG
Sbjct: 539 LRICGDCHVFCKLASKLENRNIVIRDPIRYHHFQDGKCSCG 579



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 119/380 (31%), Positives = 194/380 (51%), Gaps = 23/380 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +S +Y+  ++ C+ +  +     I   +   G+   +F  NVL+N+YVK N L DA +LF
Sbjct: 12  DSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNLLNDAHQLF 71

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D+MP+RN IS+ T I  Y+      +A+ L   + R+G   N + +++ L+    M    
Sbjct: 72  DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACNGMSDVR 131

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
           +  C    + K G +S+ +V +ALID F+  G  E A  VFD +                
Sbjct: 132 MLHC---GIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFA 188

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            N   + AL  F +M+  GF     T   VL+AC GL  + +   AH   +K  Y+ DL 
Sbjct: 189 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLI 246

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           +  AL+D+Y K G + +ARR+F +M ++DVI WS MI+  AQ   S +A++LF  M+ + 
Sbjct: 247 LNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFELMKSSG 306

Query: 339 VAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
             PN  T V VL AC+    L+ G     S+    G+         ++D+  K G+++++
Sbjct: 307 TKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHYGCMIDLLGKAGKLDDA 366

Query: 398 VELFAESP-KRNHVTWNTMI 416
           V+L  E   + + VTW T++
Sbjct: 367 VKLLNEMECEPDAVTWRTLL 386


>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 261/660 (39%), Positives = 380/660 (57%), Gaps = 42/660 (6%)

Query: 184 YKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL--------------FNDCFE--EAL 227
           + L    N F    LI+A++    +  AR+VFD +              + D  E   AL
Sbjct: 67  FDLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPAL 126

Query: 228 NFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV--ALLD 285
             F+++R + F  + FT + V+ AC   D + + +  H C +  C   D Y +V  A+L 
Sbjct: 127 RLFAEVRELRFGLDGFTLSGVIIACG--DDVGLVRQLH-CFVVVC-GYDCYASVNNAVLA 182

Query: 286 LYTKSGEISNARRIFEEMPK---KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
            Y++ G ++ ARR+F EM +   +D + W+ MI    Q    ++AVELF  M +  +  +
Sbjct: 183 CYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVD 242

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC-GRMENSVELF 401
            FT  SVL A   ++ L  G Q H ++++ G   +  V + L+D+Y+KC G M    ++F
Sbjct: 243 MFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVF 302

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMI-MFSKMLEEQVPATEVTYSSVLRACASLAAL 460
            E    + V WNTMI G+ Q  ++ +  I  F +M        + ++  V  AC++L++ 
Sbjct: 303 EEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSP 362

Query: 461 EPGMQVHCLTVKANYDMD-VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
             G QVH L +K++   + V V NAL+ MY+KCG++ DAR VFD M + N VS N+MI+G
Sbjct: 363 SVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAG 422

Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
           Y+ HG+  E L++F+LM Q+   PN +TF+ VLSAC + G +E+G+ YF  M   + IEP
Sbjct: 423 YAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEP 482

Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHI 639
             EHY+ M+ LLGRAG L +A ++IE +PF P  + W  LLGAC  H NVE+   +A   
Sbjct: 483 EAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEF 542

Query: 640 LDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAG 688
           L  EP + A +V+LSN+YA A  WE+AA+           K+PG SWIE    VH F A 
Sbjct: 543 LQLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAE 602

Query: 689 DTSHADMNIIRGMLEWLNMKSRKAGYIPDLS-AVLRD--VREDEKERYLWVHSEKLALAF 745
           DTSH  +  I   +  +  K ++AGY+PD+  A+++D  V  DEKER L  HSEKLA+AF
Sbjct: 603 DTSHPMIKEIHVYMGEILRKMKQAGYVPDIRWALVKDEEVEPDEKERRLLYHSEKLAVAF 662

Query: 746 ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            L       PI ++KNLRIC DCH AIK+IS I  REI +RD HRFH F++G CSCGD+W
Sbjct: 663 GLISTEEWVPILVVKNLRICGDCHNAIKLISAITGREITVRDTHRFHCFKEGHCSCGDYW 722



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 122/460 (26%), Positives = 230/460 (50%), Gaps = 28/460 (6%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           ++F+ N L+N Y K + +  A ++FDE+P+ + +S+ T I  Y    +   A+ LF+ + 
Sbjct: 74  NVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVR 133

Query: 150 REGHELNPFAFTAFLKVLVSMG-WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCV 208
                L+ F  +    V+++ G    L   +   V   G+D  A V  A++  +S  G +
Sbjct: 134 ELRFGLDGFTLSG---VIIACGDDVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFL 190

Query: 209 EFARKVF--------------DGLFNDCFE-----EALNFFSQMRAVGFKPNNFTFAFVL 249
             AR+VF              + +   C +     EA+  F +M   G K + FT A VL
Sbjct: 191 NEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVL 250

Query: 250 KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK-SGEISNARRIFEEMPKKDV 308
            A   +  +      HG  +K+ +  + +V   L+DLY+K +G +   R++FEE+   D+
Sbjct: 251 TAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDL 310

Query: 309 IPWSFMIARYAQ-TDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
           + W+ MI+ ++Q  DLS D +  F  M+     P+  +FV V  AC+ +    +G Q+H+
Sbjct: 311 VLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHA 370

Query: 368 LVVRVGL-LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVG 426
           L ++  +  + V V+NAL+ +Y+KCG + ++  +F   P+ N V+ N+MI GY Q G   
Sbjct: 371 LAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEV 430

Query: 427 KAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ-VHCLTVKANYDMDVVVANAL 485
           +++ +F  ML++ +    +T+ +VL AC     +E G +  + +  +   + +    + +
Sbjct: 431 ESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCM 490

Query: 486 IDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHG 524
           ID+  + G + +A R++  M  +   + W  ++     HG
Sbjct: 491 IDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHG 530



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 170/350 (48%), Gaps = 38/350 (10%)

Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISN-------- 295
           TF  +LKAC+    +   K+ H    K+      Y++     LY+K G + N        
Sbjct: 11  TFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLT 70

Query: 296 -----------------------ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFC 332
                                  AR++F+E+P+ D++ ++ +IA YA       A+ LF 
Sbjct: 71  QYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFA 130

Query: 333 RMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCG 392
            +R+     + FT   V+ AC   + + L  Q+H  VV  G      V+NA++  Y++ G
Sbjct: 131 EVRELRFGLDGFTLSGVIIACG--DDVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKG 188

Query: 393 RMENSVELF---AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSS 449
            +  +  +F    E   R+ V+WN MIV   Q  E  +A+ +F +M+   +     T +S
Sbjct: 189 FLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMAS 248

Query: 450 VLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKC-GSITDARLVFDMMNDW 508
           VL A   +  L  GMQ H + +K+ +  +  V + LID+Y+KC G + + R VF+ +   
Sbjct: 249 VLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAP 308

Query: 509 NEVSWNAMISGYSMH-GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSN 557
           + V WN MISG+S +  LS + +  F  MQ  G+ P++ +FV V SACSN
Sbjct: 309 DLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSN 358



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 116/429 (27%), Positives = 204/429 (47%), Gaps = 39/429 (9%)

Query: 69  NDDLQTAMTIHCQVLKKGNCLDLFAT--NVLLNVYVKLNRLPDATKLFDEMPE---RNTI 123
            DD+     +HC V+  G   D +A+  N +L  Y +   L +A ++F EM E   R+ +
Sbjct: 152 GDDVGLVRQLHCFVVVCG--YDCYASVNNAVLACYSRKGFLNEARRVFREMGEGGGRDEV 209

Query: 124 SFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFA----FTAFLKVLVSMGWAELCPCV 179
           S+   I       + +EAV LF  + R G +++ F      TAF  V   +G  +     
Sbjct: 210 SWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQF---- 265

Query: 180 FACVYKLGHDSNAFVGTALIDAFSVC--GCVEFARKVFDGL-----------------FN 220
              + K G   N+ VG+ LID +S C  G VE  RKVF+ +                 + 
Sbjct: 266 HGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVE-CRKVFEEIAAPDLVLWNTMISGFSQYE 324

Query: 221 DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD-LYV 279
           D  E+ +  F +M+  GF P++ +F  V  AC  L +  V K  H  A+K+    + + V
Sbjct: 325 DLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSV 384

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
             AL+ +Y+K G + +ARR+F+ MP+ +++  + MIA YAQ  + ++++ LF  M Q  +
Sbjct: 385 NNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDI 444

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVV-RVGLLSDVFVSNALMDVYAKCGRMENSV 398
           APN  TF++VL AC     ++ G +  +++  R  +  +    + ++D+  + G+++ + 
Sbjct: 445 APNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAE 504

Query: 399 ELFAESP-KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
            +    P     + W T++    + G V  A+   ++ L+ + P     Y  +    AS 
Sbjct: 505 RIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLE-PYNAAPYVMLSNMYASA 563

Query: 458 AALEPGMQV 466
           A  E    V
Sbjct: 564 ARWEEAATV 572



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 139/313 (44%), Gaps = 39/313 (12%)

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV------ 398
           TF ++L+AC     L  G  +H+L  +  +    ++SN    +Y+KCG + N+       
Sbjct: 11  TFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLT 70

Query: 399 -------------------------ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
                                    ++F E P+ + V++NT+I  Y   GE   A+ +F+
Sbjct: 71  QYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFA 130

Query: 434 KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCG 493
           ++ E +      T S V+ AC     L    Q+HC  V   YD    V NA++  Y++ G
Sbjct: 131 EVRELRFGLDGFTLSGVIIACGDDVGLV--RQLHCFVVVCGYDCYASVNNAVLACYSRKG 188

Query: 494 SITDARLVFDMMNDW---NEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVG 550
            + +AR VF  M +    +EVSWNAMI     H    E +++F  M +RG + +  T   
Sbjct: 189 FLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMAS 248

Query: 551 VLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGR-AGHLDKAAKLIEGIPF 609
           VL+A +    L  G   F  M+   G        + ++ L  + AG + +  K+ E I  
Sbjct: 249 VLTAFTCVKDLVGG-MQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIA- 306

Query: 610 QPSVMIWRALLGA 622
            P +++W  ++  
Sbjct: 307 APDLVLWNTMISG 319


>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 237/638 (37%), Positives = 355/638 (55%), Gaps = 56/638 (8%)

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           N  F EAL+ +S+ + +  +P+ +TF  V+ AC GL    +AKS H   L   +  DLY+
Sbjct: 93  NGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYI 152

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQT-------DLSIDAVELFC 332
             AL+D+Y +  ++  AR++FEEMP +DV+ W+ +I+ Y          ++   +++LF 
Sbjct: 153 GNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFM 212

Query: 333 RMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCG 392
            M   F  P+  T  S+LQAC  +  L+ G  +H  ++  G   D   SN L+++YAKCG
Sbjct: 213 EMVNQF-KPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCG 271

Query: 393 RMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMF-------------------- 432
            +  S E+F+    ++ V+WN+MI  Y+Q G++G ++ +F                    
Sbjct: 272 NLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVH 331

Query: 433 -----------SKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVV 481
                      S+M  E V     T  S+L  C+ LAA   G ++H    K   + DV V
Sbjct: 332 SEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPV 391

Query: 482 ANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW 541
            N LI+MY+KCGS+ ++  VF +M   + V+W A+IS   M+G   + ++ F  M+  G 
Sbjct: 392 GNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGI 451

Query: 542 RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAA 601
            P+++ FV ++ ACS+ GL+E+G  YF  M  +Y IEP IEHY  +V LL R+  LDKA 
Sbjct: 452 VPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAE 511

Query: 602 KLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMAR 661
             I  +P +P   IW ALL AC +  + EI    ++ I++  P+D   +VL+SNIYA   
Sbjct: 512 DFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALG 571

Query: 662 SWEKAAS-----------KEPGLSWIENQGMVHYFRAGDT---SHADMNIIRGMLEWLNM 707
            W++  S           K+PG SW+E Q  V+ F  G        ++N + GML  L  
Sbjct: 572 KWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMA 631

Query: 708 KSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVD 767
           K    GYI +L  VL D+ EDEK   L  HSE+LA+AF L    P +P++++KNLR+C D
Sbjct: 632 KE---GYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCED 688

Query: 768 CHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           CHT  K ISKIVQRE+++RD +RFH F+DG CSCGD+W
Sbjct: 689 CHTVTKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 726



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 174/357 (48%), Gaps = 39/357 (10%)

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
           P  +V  W+ +I       L  +A+ L+   ++  + P+ +TF SV+ ACA +   ++  
Sbjct: 76  PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 135

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
            IH  V+ +G  SD+++ NAL+D+Y +   ++ + ++F E P R+ V+WN++I GY   G
Sbjct: 136 SIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG 195

Query: 424 EVGKAMIMFSKMLE------EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM 477
              +A+ ++ + ++       Q     +T +S+L+AC  L  LE G  VH   + + Y+ 
Sbjct: 196 YWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYEC 255

Query: 478 DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQ 537
           D   +N LI+MYAKCG++  ++ VF  M   + VSWN+MI+ Y  +G   + LKVF+ M+
Sbjct: 256 DTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMK 315

Query: 538 QR-------------------------------GWRPNNLTFVGVLSACSNGGLLEQGEA 566
            R                               G  P+  T + +L  CS      QG+ 
Sbjct: 316 ARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKE 375

Query: 567 YFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGAC 623
                +   G+E  +     ++ +  + G L  + ++ + +  +  V+ W AL+ AC
Sbjct: 376 -IHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTK-DVVTWTALISAC 430



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 110/464 (23%), Positives = 204/464 (43%), Gaps = 59/464 (12%)

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
           P  N   + + I+  T +  F EA+ L+S   R   + + + F + +     +   E+  
Sbjct: 76  PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 135

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--------------------G 217
            +   V  +G  S+ ++G ALID +     ++ ARKVF+                    G
Sbjct: 136 SIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG 195

Query: 218 LFNDCFE---EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
            +N+  E   +++  F +M    FKP+  T   +L+AC  L  +   K  H   + + YE
Sbjct: 196 YWNEALEIYYQSIKLFMEM-VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYE 254

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELF--- 331
            D   +  L+++Y K G +  ++ +F  M  KD + W+ MI  Y Q     D++++F   
Sbjct: 255 CDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENM 314

Query: 332 ----------------------------CRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
                                        RMR   V P+  T +S+L  C+ +     G 
Sbjct: 315 KARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGK 374

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
           +IH  + ++GL SDV V N L+++Y+KCG + NS ++F     ++ VTW  +I      G
Sbjct: 375 EIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYG 434

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN 483
           E  KA+  F +M    +    V + +++ AC+    +E G+  +   +K +Y ++  + +
Sbjct: 435 EGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLN-YFHRMKKDYKIEPRIEH 493

Query: 484 --ALIDMYAKCGSITDAR-LVFDMMNDWNEVSWNAMISGYSMHG 524
              ++D+ ++   +  A   +  M    +   W A++S   M G
Sbjct: 494 YACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSG 537



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 94/387 (24%), Positives = 165/387 (42%), Gaps = 58/387 (14%)

Query: 22  NAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQ 81
           N+ +R L+     S      S T  I     + +++++ + + +C    D + A +IH +
Sbjct: 84  NSIIRALTHNGLFSEALSLYSETQRIRL---QPDTYTFPSVINACAGLLDFEMAKSIHDR 140

Query: 82  VLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEA 141
           VL  G   DL+  N L+++Y + N L  A K+F+EMP R+ +S+ + I GY  +  + EA
Sbjct: 141 VLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEA 200

Query: 142 VGLFSTLHREGHEL-NPF-----AFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVG 195
           + ++    +   E+ N F       T+ L+    +G  E    V   +   G++ +    
Sbjct: 201 LEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTAS 260

Query: 196 TALIDAFSVCGCVEFARKVFDGL------------------------------------- 218
             LI+ ++ CG +  +++VF G+                                     
Sbjct: 261 NILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDII 320

Query: 219 -----------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGC 267
                        DC    L   S+MR  G  P+  T   +L  C  L   R  K  HGC
Sbjct: 321 TWNTIIASCVHSEDC-NLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGC 379

Query: 268 ALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDA 327
             K   E D+ V   L+++Y+K G + N+ ++F+ M  KDV+ W+ +I+          A
Sbjct: 380 IFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKA 439

Query: 328 VELFCRMRQAFVAPNQFTFVSVLQACA 354
           V  F  M  A + P+   FV+++ AC+
Sbjct: 440 VRAFGEMEAAGIVPDHVAFVAIIFACS 466



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 144/291 (49%), Gaps = 13/291 (4%)

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           Q  F S+ +A A+       +++HSL++ +GL   V  S  L+  YA      +S  +F 
Sbjct: 13  QTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFR 72

Query: 403 -ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
             SP  N   WN++I      G   +A+ ++S+    ++     T+ SV+ ACA L   E
Sbjct: 73  LASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFE 132

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
               +H   +   +  D+ + NALIDMY +   +  AR VF+ M   + VSWN++ISGY+
Sbjct: 133 MAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYN 192

Query: 522 MHGLSAEVLKVF--------DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA 573
            +G   E L+++        +++ Q  ++P+ LT   +L AC + G LE G+     M+ 
Sbjct: 193 ANGYWNEALEIYYQSIKLFMEMVNQ--FKPDLLTITSILQACGHLGDLEFGKYVHDYMIT 250

Query: 574 NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACI 624
           + G E        ++++  + G+L  + ++  G+  + SV  W +++   I
Sbjct: 251 S-GYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVS-WNSMINVYI 299



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/261 (22%), Positives = 112/261 (42%), Gaps = 32/261 (12%)

Query: 81  QVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVE 140
           +V     C D  + N ++NVY++  ++ D+ K+F+ M  R+ I++ T I     S     
Sbjct: 278 EVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNL 337

Query: 141 AVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALID 200
            + + S +  EG   +     + L V   +        +  C++KLG +S+  VG  LI+
Sbjct: 338 GLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIE 397

Query: 201 AFSVCGCVEFARKVFD-----------------GLFNDCFEEALNFFSQMRAVGFKPNNF 243
            +S CG +  + +VF                  G++ +  ++A+  F +M A G  P++ 
Sbjct: 398 MYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEG-KKAVRAFGEMEAAGIVPDHV 456

Query: 244 TFAFVLKACL-------GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNA 296
            F  ++ AC        GL+     K  +    K    ++ Y  V  +DL ++S  +  A
Sbjct: 457 AFVAIIFACSHSGLVEEGLNYFHRMKKDY----KIEPRIEHYACV--VDLLSRSALLDKA 510

Query: 297 RRIFEEMP-KKDVIPWSFMIA 316
                 MP K D   W  +++
Sbjct: 511 EDFILSMPLKPDSSIWGALLS 531


>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 232/544 (42%), Positives = 326/544 (59%), Gaps = 43/544 (7%)

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
           K +V  W+ +IA  A++  S++A+  F  MR+  + PN+ TF   +++C+ +  L  G Q
Sbjct: 38  KTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQ 97

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
            H   +  G   D+FVS+AL+D+Y+KCG + ++  LF E   RN V+W +MI GYVQ  +
Sbjct: 98  AHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDD 157

Query: 425 VGKAMIMFSKMLEEQV--------------PATE------------------VTYSSVLR 452
             +A+ +F  M E  V               +TE                  VT S+VL 
Sbjct: 158 AHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLL 217

Query: 453 ACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS 512
           ACA   +   G  +H   +K   + +V V  ++IDMY KCG +  AR  FD M + N  S
Sbjct: 218 ACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKS 277

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
           W+AM++GY MHG + E L+VF  M   G +PN +TFV VL+ACS+ GLLE+G  +FK+M 
Sbjct: 278 WSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMS 337

Query: 573 ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIG 632
             + +EP +EHY  MV LLGRAG+L +A  LI+G+  +P  ++W ALLGAC +H NV++G
Sbjct: 338 HEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLG 397

Query: 633 RLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGM 681
            +SA+ + + +P++   +VLLSNIYA A  WE               K PG S ++ +G 
Sbjct: 398 EISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGR 457

Query: 682 VHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKL 741
           VH F  GD  H     I   LE L+MK ++ GY+PD+++VL DV  +EKE  L VHSEKL
Sbjct: 458 VHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKL 517

Query: 742 ALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSC 801
           A+AF +    P + I IIKNLR+C DCHTAIK ISKIV REI++RD  RFHHF+DG CSC
Sbjct: 518 AVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCSC 577

Query: 802 GDFW 805
           GD+W
Sbjct: 578 GDYW 581



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 170/333 (51%), Gaps = 34/333 (10%)

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           EAL  FS MR +  KPN  TF   +K+C  L  +   + AH  AL   +E DL+V+ AL+
Sbjct: 59  EALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALV 118

Query: 285 DLYTKSGEISNAR-------------------------------RIFEEMPKKDVIPWSF 313
           D+Y+K GE+ +AR                               R+F+ M ++DVI W+ 
Sbjct: 119 DMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNS 178

Query: 314 MIARYAQTDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV 372
           +IA YAQ  +S +++E+F RM +   +  N  T  +VL ACA      LG  IH  V+++
Sbjct: 179 IIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKM 238

Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMF 432
           GL S+VFV  +++D+Y KCG++E + + F    ++N  +W+ M+ GY   G   +A+ +F
Sbjct: 239 GLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVF 298

Query: 433 SKMLEEQVPATEVTYSSVLRACASLAALEPGMQ-VHCLTVKANYDMDVVVANALIDMYAK 491
            +M    V    +T+ SVL AC+    LE G      ++ + + +  V     ++D+  +
Sbjct: 299 YEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGR 358

Query: 492 CGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
            G + +A  L+  M    + V W A++    MH
Sbjct: 359 AGYLKEAFDLIKGMKLRPDFVVWGALLGACRMH 391



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 105/246 (42%), Gaps = 48/246 (19%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  ++  +++SC    DL +    H Q L  G   DLF ++ L+++Y K   L DA  LF
Sbjct: 75  NRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLF 134

Query: 115 DEMPERNTISFVTTIQGYTVSSQF-------------------------------VEAVG 143
           DE+  RN +S+ + I GY  +                                   E++ 
Sbjct: 135 DEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESME 194

Query: 144 LFSTLHREGH-ELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAF 202
           +F  + ++G    N    +A L      G   L  C+   V K+G +SN FVGT++ID +
Sbjct: 195 IFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMY 254

Query: 203 SVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFA 246
             CG VE ARK FD +                 +   +EAL  F +M   G KPN  TF 
Sbjct: 255 CKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFV 314

Query: 247 FVLKAC 252
            VL AC
Sbjct: 315 SVLAAC 320



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 5/124 (4%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
           +N+ + +  L +C  +   +    IH QV+K G   ++F    ++++Y K  ++  A K 
Sbjct: 207 YNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKA 266

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV-----LV 168
           FD M E+N  S+   + GY +     EA+ +F  ++  G + N   F + L       L+
Sbjct: 267 FDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLL 326

Query: 169 SMGW 172
             GW
Sbjct: 327 EEGW 330


>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 738

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 245/618 (39%), Positives = 345/618 (55%), Gaps = 44/618 (7%)

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
           +M   G +PN+ TF F+ K+C         K  H  ALK     + +V  +++ +Y   G
Sbjct: 121 RMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVG 180

Query: 292 E-------------------------------ISNARRIFEEMPKKDVIPWSFMIARYAQ 320
           E                               + +ARR+F+E+P KDV+ W+ MI+ Y Q
Sbjct: 181 EMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQ 240

Query: 321 TDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFV 380
           +    +A+  F  M++A V PN+ T V VL AC      +LG  I S V   G  S++ +
Sbjct: 241 SGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQL 300

Query: 381 SNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQV 440
           +NAL+D+Y KCG  + + ELF    +++ ++WNTMI GY  L    +A+ +F  ML   V
Sbjct: 301 TNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNV 360

Query: 441 PATEVTYSSVLRACASLAALEPGMQVHCLTVKA-NYDMDVVVANALIDMYAKCGSITDAR 499
              +VT+  +L ACA L AL+ G  VH    K      +  +  +LIDMYAKCG I  A 
Sbjct: 361 KPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAE 420

Query: 500 LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG-WRPNNLTFVGVLSACSNG 558
            VF  M+  N  SWNAM+SG++MHG +   L +F  M  +G +RP+++TFVGVLSAC+  
Sbjct: 421 RVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQA 480

Query: 559 GLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRA 618
           GL++ G  YF+SM+ +YGI P ++HY  M+ LL RA   ++A  L++ +  +P   IW +
Sbjct: 481 GLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGS 540

Query: 619 LLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAA 667
           LL AC  H  VE G   A+ +   EPE+    VLLSNIYA A  W+           K  
Sbjct: 541 LLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGM 600

Query: 668 SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVRE 727
            K PG + IE  G VH F  GD  H + N I  ML  ++    + G++P+ S VL D+ E
Sbjct: 601 KKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVDKLLEENGFVPNTSEVLYDMDE 660

Query: 728 DEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRD 787
           + KE  L  HSEKLA++F L K  P + IRI+KNLR+C +CH+A K+ISKI  REII RD
Sbjct: 661 EWKEGALSQHSEKLAISFGLIKTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARD 720

Query: 788 VHRFHHFQDGCCSCGDFW 805
            +RFHHF+DG CSC D W
Sbjct: 721 RNRFHHFKDGFCSCNDCW 738



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 135/525 (25%), Positives = 233/525 (44%), Gaps = 61/525 (11%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLN--VYVKLNRLPDATKLF 114
           H Y   L+ C    ++ T   IH  ++K G    +F  + L++         L  A  LF
Sbjct: 29  HPYLNLLEKC---KNINTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLF 85

Query: 115 DEMPER---NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
           +E  +    N   + + I+GY++SS  + ++ LFS +   G + N   F    K      
Sbjct: 86  EENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAK 145

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--------------- 216
                  + A   KL    N  V T++I  ++  G ++FAR VFD               
Sbjct: 146 ATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALIT 205

Query: 217 -----GLFNDC---------------------------FEEALNFFSQMRAVGFKPNNFT 244
                G  +D                            FEEA+  F +M+     PN  T
Sbjct: 206 GYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKST 265

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
              VL AC    +  + K          +  +L +  AL+D+Y K GE   AR +F+ + 
Sbjct: 266 MVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIE 325

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
           +KDVI W+ MI  Y+   L  +A+ LF  M ++ V PN  TF+ +L ACA +  LDLG  
Sbjct: 326 EKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKW 385

Query: 365 IHSLVVR-VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
           +H+ + + +   S+  +  +L+D+YAKCG +E +  +F     RN  +WN M+ G+   G
Sbjct: 386 VHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHG 445

Query: 424 EVGKAMIMFSKMLEEQV-PATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
              +A+ +FS+M+ + +    ++T+  VL AC     ++ G Q +  ++  +Y +   + 
Sbjct: 446 HAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQ-YFRSMIQDYGISPKLQ 504

Query: 483 N--ALIDMYAKCGSITDARLVFDMMN-DWNEVSWNAMISGYSMHG 524
           +   +ID+ A+     +A ++   M  + +   W +++S    HG
Sbjct: 505 HYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHG 549



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 162/370 (43%), Gaps = 29/370 (7%)

Query: 82  VLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEA 141
           V  K +  D  +   L+  YV    L DA +LFDE+P ++ +S+   I GY  S +F EA
Sbjct: 188 VFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEA 247

Query: 142 VGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDA 201
           +  F  +       N       L         EL   + + V   G  SN  +  ALID 
Sbjct: 248 IVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDM 307

Query: 202 FSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTF 245
           +  CG  + AR++FDG+                +   +EEAL  F  M     KPN+ TF
Sbjct: 308 YCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTF 367

Query: 246 AFVLKACLGLDTIRVAKSAHGCA---LKTCYEMDLYVAVALLDLYTKSGEISNARRIFEE 302
             +L AC  L  + + K  H      L+      L+   +L+D+Y K G I  A R+F  
Sbjct: 368 LGILHACACLGALDLGKWVHAYIDKNLRNSSNASLW--TSLIDMYAKCGCIEAAERVFRS 425

Query: 303 MPKKDVIPWSFMIARYAQTDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQACATMEGLDL 361
           M  +++  W+ M++ +A    +  A+ LF  M  +    P+  TFV VL AC     +DL
Sbjct: 426 MHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDL 485

Query: 362 GNQ-IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMIV-- 417
           G+Q   S++   G+   +     ++D+ A+  + E +  L      + +   W +++   
Sbjct: 486 GHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSAC 545

Query: 418 ---GYVQLGE 424
              G V+ GE
Sbjct: 546 KAHGRVEFGE 555



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 142/316 (44%), Gaps = 41/316 (12%)

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYA--KCGRMENSVEL 400
           Q  ++++L+ C  +       QIHSL+++ GL + VFV + L+   A    G +  ++ L
Sbjct: 28  QHPYLNLLEKCKNINTF---KQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSL 84

Query: 401 FAESP---KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
           F E+    K N   WN++I GY        ++ +FS+ML   V     T+  + ++C   
Sbjct: 85  FEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKA 144

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDM------------- 504
            A   G Q+H   +K     +  V  ++I MYA  G +  ARLVFD              
Sbjct: 145 KATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALI 204

Query: 505 --------MNDWNE----------VSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNL 546
                   ++D             VSWNAMISGY   G   E +  F  MQ+    PN  
Sbjct: 205 TGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKS 264

Query: 547 TFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEG 606
           T V VLSAC +    E G+ +  S V + G    ++   +++ +  + G  D A +L +G
Sbjct: 265 TMVVVLSACGHTRSGELGK-WIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDG 323

Query: 607 IPFQPSVMIWRALLGA 622
           I  +  V+ W  ++G 
Sbjct: 324 IE-EKDVISWNTMIGG 338



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 100/216 (46%), Gaps = 18/216 (8%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +    L +C      +    I   V   G   +L  TN L+++Y K      A +LF
Sbjct: 262 NKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELF 321

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D + E++ IS+ T I GY+  S + EA+ LF  + R   + N   F   L     +G  +
Sbjct: 322 DGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALD 381

Query: 175 LCPCVFACVYK-LGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF---------- 223
           L   V A + K L + SNA + T+LID ++ CGC+E A +VF  + +             
Sbjct: 382 LGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGF 441

Query: 224 ------EEALNFFSQMRAVG-FKPNNFTFAFVLKAC 252
                 E AL  FS+M   G F+P++ TF  VL AC
Sbjct: 442 AMHGHAERALALFSEMVNKGLFRPDDITFVGVLSAC 477


>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
 gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
 gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 786

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 269/809 (33%), Positives = 401/809 (49%), Gaps = 131/809 (16%)

Query: 74  TAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYT 133
           TA  +HC+V+K G    ++  N L+NVY K      A KLFDEMP R   S+ T +  Y+
Sbjct: 32  TAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYS 91

Query: 134 VSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAF 193
                      F  L +                  S+ W                     
Sbjct: 92  KRGDMDSTCEFFDQLPQRD----------------SVSW--------------------- 114

Query: 194 VGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL 253
             T +I  +   G                + +A+     M   G +P  FT   VL +  
Sbjct: 115 --TTMIVGYKNIGQ---------------YHKAIRVMGDMVKEGIEPTQFTLTNVLASVA 157

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIF------------- 300
               +   K  H   +K     ++ V+ +LL++Y K G+   A+ +F             
Sbjct: 158 ATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNA 217

Query: 301 ------------------EEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM-RQAFVAP 341
                             E+M ++D++ W+ MI+ + Q    + A+++F +M R + ++P
Sbjct: 218 MIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSP 277

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL- 400
           ++FT  SVL ACA +E L +G QIHS +V  G      V NAL+ +Y++CG +E +  L 
Sbjct: 278 DRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLI 337

Query: 401 --------------------------------FAESPKRNHVTWNTMIVGYVQLGEVGKA 428
                                           F     R+ V W  MIVGY Q G  G+A
Sbjct: 338 EQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEA 397

Query: 429 MIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDM 488
           + +F  M+         T +++L   +SLA+L  G Q+H   VK+     V V+NALI M
Sbjct: 398 INLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITM 457

Query: 489 YAKCGSITDARLVFDMMN-DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLT 547
           YAK G+IT A   FD++  + + VSW +MI   + HG + E L++F+ M   G RP+++T
Sbjct: 458 YAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHIT 517

Query: 548 FVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGI 607
           +VGV SAC++ GL+ QG  YF  M     I P + HY  MV L GRAG L +A + IE +
Sbjct: 518 YVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKM 577

Query: 608 PFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA 667
           P +P V+ W +LL AC +H N+++G+++A+ +L  EPE+   +  L+N+Y+    WE+AA
Sbjct: 578 PIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAA 637

Query: 668 S-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIP 716
                       KE G SWIE +  VH F   D +H + N I   ++ +  + +K GY+P
Sbjct: 638 KIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVP 697

Query: 717 DLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIIS 776
           D ++VL D+ E+ KE+ L  HSEKLA+AF L   P  + +RI+KNLR+C DCHTAIK IS
Sbjct: 698 DTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFIS 757

Query: 777 KIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           K+V REII+RD  RFHHF+DG CSC D+W
Sbjct: 758 KLVGREIIVRDTTRFHHFKDGFCSCRDYW 786



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 153/337 (45%), Gaps = 72/337 (21%)

Query: 340 APNQFTFVSVLQACATM--------EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC 391
           AP   +  ++L+ C  +         G      +H  V++ GL+  V++ N LM+VY+K 
Sbjct: 3   APVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKT 62

Query: 392 -------------------------------GRMENSVELFAESPKRNHVTWNTMIVGYV 420
                                          G M+++ E F + P+R+ V+W TMIVGY 
Sbjct: 63  GYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYK 122

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV 480
            +G+  KA+ +   M++E +  T+ T ++VL + A+   +E G +VH   VK     +V 
Sbjct: 123 NIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVS 182

Query: 481 VANALIDMYAKCGSITDARLVFDMM-----NDWNE------------------------- 510
           V+N+L++MYAKCG    A+ VFD M     + WN                          
Sbjct: 183 VSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERD 242

Query: 511 -VSWNAMISGYSMHGLSAEVLKVFD-LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYF 568
            V+WN+MISG++  G     L +F  +++     P+  T   VLSAC+N   L  G+   
Sbjct: 243 IVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQ-I 301

Query: 569 KSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
            S +   G +       +++S+  R G ++ A +LIE
Sbjct: 302 HSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIE 338


>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 766

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 262/767 (34%), Positives = 392/767 (51%), Gaps = 85/767 (11%)

Query: 50  SVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD 109
           S+   +S S+   +  C+ ND    A     Q+ +K    DL + NV+++  V+   L  
Sbjct: 74  SMPRRSSISWNAMISGCLSNDKFYLAR----QLFEKMPTRDLVSWNVMISGCVRYRNLRA 129

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A  LFD+MPER+ +S+   + GY  +    EA  +F  +                     
Sbjct: 130 ARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM--------------------- 168

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNF 229
                  PC            N+     ++ A+   G +E AR+    LF    +  L  
Sbjct: 169 -------PC-----------KNSISWNGMLAAYVQNGRIEDARR----LFESKADWELIS 206

Query: 230 FSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK 289
           ++ M     K N    A  +                        E D      ++  Y +
Sbjct: 207 WNCMMGGYVKRNRLVDARGI-------------------FDRMPERDEVSWNTMISGYAQ 247

Query: 290 SGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSV 349
           +GE+  A+R+FEE P +DV  W+ M++ Y Q  +  +A  +F  M +     N  ++ ++
Sbjct: 248 NGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPE----KNSVSWNAI 303

Query: 350 LQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNH 409
           +      + +D   ++   +       +V   N ++  YA+ G +  +   F   P+R+ 
Sbjct: 304 IAGYVQCKRMDQARELFEAMP----CQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDS 359

Query: 410 VTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCL 469
           ++W  +I GY Q G   +A+ +F +M  +       T++S L  CA +AALE G QVH  
Sbjct: 360 ISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGR 419

Query: 470 TVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEV 529
            VKA  +    V NAL+ MY KCG+I DA +VF+ + +   VSWN MI+GY+ HG   E 
Sbjct: 420 VVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEA 479

Query: 530 LKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVS 589
           L +F+ M++ G  P+++T VGVLSACS+ GL+++G  YF SM  +YGI    +HYT M+ 
Sbjct: 480 LMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMID 539

Query: 590 LLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEAT 649
           LLGRAG LD A  L++ +PF+P    W ALLGA  IH N E+G  +A+ I + EP++   
Sbjct: 540 LLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGM 599

Query: 650 HVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNII 698
           +VLLSN+YA +  W           ++   K PG SW+E Q  +H F  GD+ H + + I
Sbjct: 600 YVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRI 659

Query: 699 RGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRI 758
              LE L++K +K GY+     VL DV E+EK   L  HSEKLA+AF +  +P   PIR+
Sbjct: 660 YTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAGRPIRV 719

Query: 759 IKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           IKNLR+C DCH A+K ISKIV R II+RD HRFHHF  G CSCGD+W
Sbjct: 720 IKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 766



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 105/431 (24%), Positives = 190/431 (44%), Gaps = 51/431 (11%)

Query: 224 EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
           + AL  F+ M     + ++ ++  ++  CL  D   +A+       +     DL     +
Sbjct: 66  DSALRLFNSMP----RRSSISWNAMISGCLSNDKFYLARQL----FEKMPTRDLVSWNVM 117

Query: 284 LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
           +    +   +  AR +F++MP++DV+ W+ M++ YAQ     +A E+F  M       N 
Sbjct: 118 ISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM----PCKNS 173

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
            ++  +L A      ++   ++        L+S     N +M  Y K  R+ ++  +F  
Sbjct: 174 ISWNGMLAAYVQNGRIEDARRLFESKADWELIS----WNCMMGGYVKRNRLVDARGIFDR 229

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEV-TYSSVLRACASLAALEP 462
            P+R+ V+WNTMI GY Q GE+ +A  +F     E+ P  +V T+++++        L+ 
Sbjct: 230 MPERDEVSWNTMISGYAQNGELLEAQRLF-----EESPVRDVFTWTAMVSGYVQNGMLDE 284

Query: 463 GMQV-HCLTVKANYDMDVVVA--------------------------NALIDMYAKCGSI 495
             +V   +  K +   + ++A                          N +I  YA+ G I
Sbjct: 285 ARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDI 344

Query: 496 TDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSAC 555
             AR  FD M   + +SW A+I+GY+  G   E L +F  M++ G R N  TF   LS C
Sbjct: 345 AQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTC 404

Query: 556 SNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMI 615
           +    LE G+      V   G+E       +++ +  + G++D A  + EGI  +  V+ 
Sbjct: 405 AEIAALELGKQ-VHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIE-EKEVVS 462

Query: 616 WRALLGACIIH 626
           W  ++     H
Sbjct: 463 WNTMIAGYARH 473



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/362 (21%), Positives = 156/362 (43%), Gaps = 61/362 (16%)

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           + ++G+  +A R+F  MP++  I W+ MI+     D    A +LF +M       +  ++
Sbjct: 59  HMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKM----PTRDLVSW 114

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
             ++  C     L     +   +       DV   NA++  YA+ G ++ + E+F E P 
Sbjct: 115 NVMISGCVRYRNLRAARLLFDQMPE----RDVVSWNAMLSGYAQNGYVKEAKEIFDEMPC 170

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
           +N ++WN M+  YVQ G +  A  +F                                  
Sbjct: 171 KNSISWNGMLAAYVQNGRIEDARRLF---------------------------------- 196

Query: 467 HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLS 526
                ++  D +++  N ++  Y K   + DAR +FD M + +EVSWN MISGY+ +G  
Sbjct: 197 -----ESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGEL 251

Query: 527 AEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTS 586
            E  ++F+    R    +  T+  ++S     G+L++    F  M     +      + +
Sbjct: 252 LEAQRLFEESPVR----DVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVS-----WNA 302

Query: 587 MVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPED 646
           +++   +   +D+A +L E +P Q +V  W  ++     + ++      A++  D  P+ 
Sbjct: 303 IIAGYVQCKRMDQARELFEAMPCQ-NVSSWNTMITGYAQNGDIA----QARNFFDRMPQR 357

Query: 647 EA 648
           ++
Sbjct: 358 DS 359



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 33/272 (12%)

Query: 376 SDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKM 435
           +D+   N  +  + + G+ ++++ LF   P+R+ ++WN MI G +   +   A  +F KM
Sbjct: 47  ADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKM 106

Query: 436 LEEQVPATEVTYSSV-----LRACASLAALEPGMQV--------------HCLTVKANYD 476
               + +  V  S       LRA   L    P   V              +    K  +D
Sbjct: 107 PTRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFD 166

Query: 477 ----MDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
                + +  N ++  Y + G I DAR +F+   DW  +SWN M+ GY       +   +
Sbjct: 167 EMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGI 226

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
           FD M +R     N    G      NG LLE    + +S V +      +  +T+MVS   
Sbjct: 227 FDRMPERDEVSWNTMISGY---AQNGELLEAQRLFEESPVRD------VFTWTAMVSGYV 277

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALLGACI 624
           + G LD+A ++ +G+P + SV  W A++   +
Sbjct: 278 QNGMLDEARRVFDGMPEKNSVS-WNAIIAGYV 308



 Score = 43.9 bits (102), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 76/168 (45%), Gaps = 10/168 (5%)

Query: 476 DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDL 535
           D D+V  N  I  + + G    A  +F+ M   + +SWNAMISG   +       ++F+ 
Sbjct: 46  DADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEK 105

Query: 536 MQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAG 595
           M  R    + +++  ++S C     L      F  M      E  +  + +M+S   + G
Sbjct: 106 MPTR----DLVSWNVMISGCVRYRNLRAARLLFDQMP-----ERDVVSWNAMLSGYAQNG 156

Query: 596 HLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFE 643
           ++ +A ++ + +P + S+  W  +L A + +  +E  R   +   D+E
Sbjct: 157 YVKEAKEIFDEMPCKNSIS-WNGMLAAYVQNGRIEDARRLFESKADWE 203


>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Brachypodium distachyon]
          Length = 631

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 225/568 (39%), Positives = 342/568 (60%), Gaps = 11/568 (1%)

Query: 249 LKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDV 308
           L+ C    ++ V KS HG A+      D      L++LYTK G    AR +F+ M  + +
Sbjct: 64  LQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIMHVRSI 123

Query: 309 IPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSL 368
           + W+ MIA Y  +   + A++LF RM +     ++FT  S + ACA    ++   Q+H++
Sbjct: 124 VSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQLHTI 183

Query: 369 VVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKA 428
            +++ L S+ FV  A++DVYAKC  ++++  +F + P+R  VTW+++  GYVQ G   +A
Sbjct: 184 ALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEA 243

Query: 429 MIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDM 488
           + +F     E V  TE T S++L ACASLA    G+Q+H + +K  +  +  VA +L+D+
Sbjct: 244 LHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDV 303

Query: 489 YAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTF 548
           YA+CG I  A  +F  M   N V WNAMI+ +S H  S E + +F+ MQQ G  PN +T+
Sbjct: 304 YARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTY 363

Query: 549 VGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIP 608
           + VLS CS+ GL+E+G  YF  ++++  +EP + HY+ MV +LGR+G  D+A +L+  +P
Sbjct: 364 LSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMP 423

Query: 609 FQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEK--- 665
           F+P+  +W +LLG+C  +NN+ + R++A+ +   EP++   HVLLSN+YA + +WE    
Sbjct: 424 FEPTASMWGSLLGSCRNYNNIRLARIAAEQLFQLEPDNGGNHVLLSNVYAASGNWENVLM 483

Query: 666 --------AASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPD 717
                    A KE G SWIE +G VH F  G+  H  +  I   LE +  + RK      
Sbjct: 484 ARKYLKDSGAKKEMGRSWIEAKGKVHVFVVGERKHPRITDIYNKLEEIYHEMRKFARRTS 543

Query: 718 LSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISK 777
           +   L DV  ++KE  L  HSEKLAL+F L  +P + PI I KNLRIC DCH+ +KI + 
Sbjct: 544 IECDLHDVHAEQKEELLKHHSEKLALSFGLISLPSNIPIIIHKNLRICGDCHSFMKIAAH 603

Query: 778 IVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           I +R +I+RD +RFHHF+DG CSCGDFW
Sbjct: 604 ITERLVIVRDTNRFHHFKDGSCSCGDFW 631



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 180/360 (50%), Gaps = 17/360 (4%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           LQ C +   L    + H   +  G   D    N+L+N+Y K  R   A  +FD M  R+ 
Sbjct: 64  LQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIMHVRSI 123

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +S+ T I GYT S + V+A+ LFS +HREG  ++ F  ++ +    +      C  +   
Sbjct: 124 VSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQLHTI 183

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-----------GLF-----NDCFEEA 226
             KL  DSN+FVGTA++D ++ C  ++ A  VF+            LF     N   EEA
Sbjct: 184 ALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEA 243

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           L+ F   +  G +   FT + +L AC  L         H   LK  +  + +VA +L+D+
Sbjct: 244 LHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDV 303

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y + G+I  A  +F  M  K+V+ W+ MIA +++   S +A+ LF +M+Q  + PN+ T+
Sbjct: 304 YARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTY 363

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLS-DVFVSNALMDVYAKCGRMENSVELFAESP 405
           +SVL  C+    ++ G    SL++    +  +V   + ++DV  + G+ + + EL  + P
Sbjct: 364 LSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMP 423



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/326 (30%), Positives = 168/326 (51%), Gaps = 19/326 (5%)

Query: 198 LIDAFSVCGCVEFARKVFDGL--------------FNDCFE--EALNFFSQMRAVGFKPN 241
           LI+ ++ CG  + AR VFD +              +    E  +AL  FS+M   G   +
Sbjct: 98  LINLYTKCGRNDCARLVFDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMS 157

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
            FT +  + AC     I   K  H  ALK   + + +V  A+LD+Y K   I +A  +FE
Sbjct: 158 EFTLSSTICACAAKYAINECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFE 217

Query: 302 EMPKKDVIPWSFMIARYAQTDLSIDAVELF-CRMRQAFVAPNQFTFVSVLQACATMEGLD 360
           +MP++ ++ WS + A Y Q  L  +A+ LF C  R+  V   +FT  ++L ACA++    
Sbjct: 218 KMPERTLVTWSSLFAGYVQNGLHEEALHLFRCAQREG-VELTEFTLSAILSACASLALKI 276

Query: 361 LGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYV 420
            G Q+H+++++ G   + FV+ +L+DVYA+CG++E +  LFA    +N V WN MI  + 
Sbjct: 277 EGIQLHAVILKCGFHGNFFVAASLVDVYARCGQIEKAYALFAYMEHKNVVIWNAMIASFS 336

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK-ANYDMDV 479
           +     +AMI+F KM +  +   EVTY SVL  C+    +E G     L +     + +V
Sbjct: 337 RHAHSWEAMILFEKMQQLGIFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNV 396

Query: 480 VVANALIDMYAKCGSITDARLVFDMM 505
           +  + ++D+  + G   +A  + + M
Sbjct: 397 LHYSCMVDVLGRSGKTDEAWELLNKM 422



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 122/275 (44%), Gaps = 28/275 (10%)

Query: 51  VSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDA 110
           +SEF   + ++++ +C     +     +H   LK     + F    +L+VY K N + DA
Sbjct: 156 MSEF---TLSSTICACAAKYAINECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDA 212

Query: 111 TKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSM 170
             +F++MPER  +++ +   GY  +    EA+ LF    REG EL  F  +A L    S+
Sbjct: 213 CWVFEKMPERTLVTWSSLFAGYVQNGLHEEALHLFRCAQREGVELTEFTLSAILSACASL 272

Query: 171 GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF 223
                   + A + K G   N FV  +L+D ++ CG +E A  +F  +       +N   
Sbjct: 273 ALKIEGIQLHAVILKCGFHGNFFVAASLVDVYARCGQIEKAYALFAYMEHKNVVIWNAMI 332

Query: 224 E---------EALNFFSQMRAVGFKPNNFTFAFVLKAC--LGLDTIRVAKSAHGCAL--- 269
                     EA+  F +M+ +G  PN  T+  VL  C   GL    V K  H  +L   
Sbjct: 333 ASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSVLSVCSHAGL----VEKGRHYFSLLMS 388

Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
               E ++     ++D+  +SG+   A  +  +MP
Sbjct: 389 DRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMP 423



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 57/109 (52%)

Query: 448 SSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND 507
           S  L+ CA   +L  G   H L +      D +  N LI++Y KCG    ARLVFD+M+ 
Sbjct: 61  SQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIMHV 120

Query: 508 WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS 556
            + VSWN MI+GY+  G   + LK+F  M + G   +  T    + AC+
Sbjct: 121 RSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACA 169


>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
 gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
          Length = 716

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 242/662 (36%), Positives = 363/662 (54%), Gaps = 79/662 (11%)

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
           F   +  FS M   G  P++     V+K C  L  ++  K  H  AL +   +D  V  +
Sbjct: 55  FGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSS 114

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQT--------------DLSI--- 325
           LL +Y +   + +AR +F+++P+  V+  S +I+R+A+               DL +   
Sbjct: 115 LLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELN 174

Query: 326 ------------------DAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
                             DAV +F  M    + P+  +  SVL A   ++   +G QIH 
Sbjct: 175 LVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHC 234

Query: 368 LVVRVGLLSDVFVSNALMDVYAKC-------------------------------GRMEN 396
            V++ GL  D FV +AL+D+Y KC                               G ++N
Sbjct: 235 YVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDN 294

Query: 397 SVELFAE--SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
           ++E+F +      N V+W +MI    Q G+  +A+ +F +M  E V    VT   +L AC
Sbjct: 295 ALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPAC 354

Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
            ++AAL  G   HC +++     DV V +ALIDMYAKCG +  +RL FDMM + N VSWN
Sbjct: 355 GNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWN 414

Query: 515 AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
           ++++GY+MHG + E + +F+LMQ+ G +P++++F  VLSAC+ GGL E+G  YF SM  N
Sbjct: 415 SLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRN 474

Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL 634
           +G+E  +EHY+ MV+LLGR+G L++A  +I+ +PF+P   +W ALL +C +HN V++G +
Sbjct: 475 HGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGEI 534

Query: 635 SAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVH 683
           +A+ + + EP +   ++LLSNIYA    W            +   K PG SWIE +  VH
Sbjct: 535 AAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGYSWIEIKNKVH 594

Query: 684 YFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLAL 743
              AGD+SH  M  I   L  L ++ +K+GY+P    VL+DV E +KE+ L  HSEKLA+
Sbjct: 595 MLLAGDSSHPQMPQIIEKLAKLTVEMKKSGYVPHTDFVLQDVEEQDKEQILCGHSEKLAV 654

Query: 744 AFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGD 803
              L    P  P+++IKNLRIC DCH  IK IS   +REI +RD +RFH F+ G CSCGD
Sbjct: 655 VLGLLNTKPGFPLQVIKNLRICRDCHAVIKFISDFEKREIFVRDTNRFHQFKGGVCSCGD 714

Query: 804 FW 805
           +W
Sbjct: 715 YW 716



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 114/493 (23%), Positives = 202/493 (40%), Gaps = 106/493 (21%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +S    T +++C     LQT   +HC  L  G  LD    + LL++YV+ + L DA  +F
Sbjct: 73  DSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVF 132

Query: 115 DEMP-----------------------------------ERNTISFVTTIQGYTVSSQFV 139
           D++P                                   E N +S+   I G+  S  ++
Sbjct: 133 DKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYL 192

Query: 140 EAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALI 199
           +AV +F  +H EG + +  + ++ L  +  +    +   +   V K G   + FV +ALI
Sbjct: 193 DAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALI 252

Query: 200 DAFSVCGCVEFARKVF--------------------DGLFNDCFE--------------- 224
           D +  C C      VF                    +GL ++  E               
Sbjct: 253 DMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSW 312

Query: 225 --------------EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALK 270
                         EAL  F +M+  G KPN+ T   +L AC  +  +   K+AH  +L+
Sbjct: 313 TSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLR 372

Query: 271 TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVEL 330
                D+YV  AL+D+Y K G +  +R  F+ MP ++++ W+ ++A YA    + +A+ +
Sbjct: 373 NGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINI 432

Query: 331 FCRMRQAFVAPNQFTFVSVLQACA----TMEG---LDLGNQIHSLVVRVGLLSDVFVSNA 383
           F  M++    P+  +F  VL AC     T EG    D  ++ H +  R+   S       
Sbjct: 433 FELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYS------C 486

Query: 384 LMDVYAKCGRMENSVELFAESP-KRNHVTWNTMIVG-----YVQLGEVGKAMIMFSKMLE 437
           ++ +  + GR+E +  +  + P + +   W  ++        V LGE+    +     LE
Sbjct: 487 MVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGEIAAKRVF---ELE 543

Query: 438 EQVPATEVTYSSV 450
            + P   +  S++
Sbjct: 544 PRNPGNYILLSNI 556


>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 637

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 223/573 (38%), Positives = 352/573 (61%), Gaps = 13/573 (2%)

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
           F  +L+ C     +  AK+ HG  ++   + D+ ++  L++ Y+K G +  AR++F+ M 
Sbjct: 66  FIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGML 125

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC-ATMEGLDLGN 363
           ++ ++ W+ MI  Y +  +  +A+++F  MR      ++FT  SVL AC A  + L+   
Sbjct: 126 ERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALEC-K 184

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
           ++H L ++  L  +++V  AL+D+YAKCG + ++V++F     ++ VTW++M+ GYVQ  
Sbjct: 185 KLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSK 244

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN 483
              +A++++ +     +   + T SSV+ AC++LAAL  G Q+H +  K+ +  +V VA+
Sbjct: 245 NYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVAS 304

Query: 484 ALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRP 543
           + +DMYAKCGS+ ++ ++F  + + N   WN +ISG++ H    EV+ +F+ MQQ G  P
Sbjct: 305 SAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHP 364

Query: 544 NNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKL 603
           N +TF  +LS C + GL+E+G  +FK M   YG+ P + HY+ MV +LGRAG L +A +L
Sbjct: 365 NEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYEL 424

Query: 604 IEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW 663
           I+ IPF+P+  IW +LL +C +  N+E+  ++A+ + + EPE+   HVLLSNIYA  + W
Sbjct: 425 IKSIPFEPTASIWGSLLASCRVCKNLELAEVAAKKLFELEPENAGNHVLLSNIYAANKQW 484

Query: 664 EKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKA 712
           E+ A            K  G SWI+ +  VH FR G++SH  +  I  ML+ L ++ RK 
Sbjct: 485 EEIAKSRKLLRDCDVKKVRGQSWIDIKDKVHIFRVGESSHPRIREICTMLDNLVIELRKF 544

Query: 713 GYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAI 772
           GY P +   L DV   +KE  L  HSEKLAL F L  +P  S +RI+KNLRICVDCH  +
Sbjct: 545 GYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPEGSTVRIMKNLRICVDCHEFM 604

Query: 773 KIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           K  S   +R II+RD +RFHHF DG CSCG+FW
Sbjct: 605 KAASMATRRFIIVRDANRFHHFSDGHCSCGEFW 637



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 198/414 (47%), Gaps = 26/414 (6%)

Query: 12  CKQLTHQSKINAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFN---SHSYATSLQSCIQ 68
           CK L  +S  ++  R +S  A+   ++ S     P  +S  EFN   +  +   LQ C +
Sbjct: 22  CKILPRRSNTSSLSRNISVFASYEQEELS-----PGRYS-DEFNVVQASDFIEILQLCAR 75

Query: 69  NDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTT 128
           N  +  A   H + ++     D+  +NVL+N Y K   +  A ++FD M ER+ +S+ T 
Sbjct: 76  NGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERSLVSWNTM 135

Query: 129 IQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGH 188
           I  YT +    EA+ +F  +  EG + + F  ++ L    +   A  C  +     K   
Sbjct: 136 IGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKKLHCLSMKTSL 195

Query: 189 DSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDC----------------FEEALNFFSQ 232
           D N +VGTAL+D ++ CG +  A +VF+ + +                  +EEAL  + +
Sbjct: 196 DLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRR 255

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
            + +  + N FT + V+ AC  L  +   K  H    K+ +  +++VA + +D+Y K G 
Sbjct: 256 AQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGS 315

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           +  +  IF E+ +K++  W+ +I+ +A+     + + LF +M+Q  + PN+ TF S+L  
Sbjct: 316 LRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSV 375

Query: 353 CATMEGLDLGNQIHSLV-VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           C     ++ G +   L+    GL  +V   + ++D+  + G +  + EL    P
Sbjct: 376 CGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIP 429


>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
 gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
          Length = 627

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 230/556 (41%), Positives = 329/556 (59%), Gaps = 12/556 (2%)

Query: 261 AKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQ 320
            +  H   +K+  ++   V   L++ Y+K+     + ++FEE  +K    WS +I+ +AQ
Sbjct: 73  GQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSSVISSFAQ 132

Query: 321 TDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFV 380
            +  + A++ FCRM    + P+   F S  +ACA +   D+G  +H LV++ G   DVFV
Sbjct: 133 NEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDVDVFV 192

Query: 381 SNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQV 440
            ++L+D+YAKCG ++ +  +F E P RN V+W+ MI GY QLGE  +AM +F + L E +
Sbjct: 193 GSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLEGL 252

Query: 441 PATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARL 500
              + T SSV+R C S   LE G Q+H L  K +YD+   V ++LI +Y+KCG I  A  
Sbjct: 253 DVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIEGAYR 312

Query: 501 VFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGL 560
           VFD +   N   WNAM+   + H  + E   +F  M+  G RPN +TF+ VL ACS+ GL
Sbjct: 313 VFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVLYACSHAGL 372

Query: 561 LEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
           +E+G+ YF +++  Y IEP  +HY SMV LLGRAG L +A  +I+G+P +P+  +W A +
Sbjct: 373 VEEGKKYF-ALMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPTESVWGAFI 431

Query: 621 GACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SK 669
             C IH N ++   +A  + +        HV+LSN YA A  +E AA            K
Sbjct: 432 TGCRIHGNTDLAAFAADKVFELGAVSSGLHVMLSNAYAAAGRYEDAAKARKMLRDRGVKK 491

Query: 670 EPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDE 729
           E GLSWIE    VH F AGD  H  M  I   LE L  +  +AGY+ D S VLR+V  +E
Sbjct: 492 ETGLSWIEEGNRVHKFAAGDRFHVRMKEIYQKLEDLGEEMERAGYVADTSFVLREVGSEE 551

Query: 730 KERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVH 789
           K + +  HSE+LA+AF L  +P   PIRI+KNLR+C DCH AIK ISK+  R II+RD +
Sbjct: 552 KNQTIRYHSERLAIAFGLISIPLGRPIRIMKNLRVCGDCHNAIKFISKLSGRVIIVRDNN 611

Query: 790 RFHHFQDGCCSCGDFW 805
           RFH F+DG CSC D+W
Sbjct: 612 RFHRFEDGKCSCADYW 627



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/392 (24%), Positives = 182/392 (46%), Gaps = 17/392 (4%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L S  ++  L     IH  ++K G  +     + L+N Y K      ++++F+E   +++
Sbjct: 61  LLSQTRSRSLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSS 120

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
            ++ + I  +  + + V A+  F  +  E    +   F +  K    +G  ++   V   
Sbjct: 121 TTWSSVISSFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCL 180

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF----------------EEA 226
           V K G+D + FVG++L+D ++ CG ++ AR VFD + +                   EEA
Sbjct: 181 VIKTGYDVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEA 240

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           +  F +    G   N+FT + V++ C     + + K  HG   KT Y++  +V  +L+ L
Sbjct: 241 MRLFKEALLEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISL 300

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y+K G I  A R+F+E+P K++  W+ M+   AQ   + +A +LF +M  A + PN  TF
Sbjct: 301 YSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITF 360

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
           + VL AC+    ++ G +  +L+ +  +        +++D+  + G+++ ++ +    P 
Sbjct: 361 LCVLYACSHAGLVEEGKKYFALMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPT 420

Query: 407 R-NHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
                 W   I G    G    A     K+ E
Sbjct: 421 EPTESVWGAFITGCRIHGNTDLAAFAADKVFE 452



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 130/266 (48%), Gaps = 16/266 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           + H + ++ ++C          ++HC V+K G  +D+F  + L+++Y K   + +A  +F
Sbjct: 154 DDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNVF 213

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           DEMP RN +S+   I GYT   +  EA+ LF     EG ++N F  ++ ++V  S    E
Sbjct: 214 DEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLEGLDVNDFTLSSVIRVCGSATLLE 273

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-------GLFNDCF---- 223
           L   +    +K  +D + FVG++LI  +S CG +E A +VFD       G++N       
Sbjct: 274 LGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACA 333

Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                +EA + F++M   G +PN  TF  VL AC     +   K       K   E    
Sbjct: 334 QHAHTKEAFDLFTKMENAGMRPNFITFLCVLYACSHAGLVEEGKKYFALMKKYEIEPGTQ 393

Query: 279 VAVALLDLYTKSGEISNARRIFEEMP 304
              +++DL  ++G++  A  + + MP
Sbjct: 394 HYASMVDLLGRAGKLQEALSVIKGMP 419



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 37/184 (20%), Positives = 86/184 (46%), Gaps = 3/184 (1%)

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           +L  G Q+H   +K+   +  +V + LI+ Y+K      +  VF+     +  +W+++IS
Sbjct: 69  SLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSSVIS 128

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
            ++ +      ++ F  M      P++  F     AC+  G  + G++    +V   G +
Sbjct: 129 SFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKS-VHCLVIKTGYD 187

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL-GACIIHNNVEIGRLSAQ 637
             +   +S+V +  + G + +A  + + +P + +V+ W  ++ G   +  + E  RL  +
Sbjct: 188 VDVFVGSSLVDMYAKCGDIKEARNVFDEMPHR-NVVSWSGMIYGYTQLGEHEEAMRLFKE 246

Query: 638 HILD 641
            +L+
Sbjct: 247 ALLE 250



 Score = 39.7 bits (91), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 37/178 (20%), Positives = 67/178 (37%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           + N  + ++ ++ C     L+    IH    K    L  F  + L+++Y K   +  A +
Sbjct: 253 DVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIEGAYR 312

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +FDE+P +N   +   +      +   EA  LF+ +   G   N   F   L      G 
Sbjct: 313 VFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVLYACSHAGL 372

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFF 230
            E     FA + K   +       +++D     G ++ A  V  G+  +  E     F
Sbjct: 373 VEEGKKYFALMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPTESVWGAF 430


>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
 gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
          Length = 845

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 277/817 (33%), Positives = 416/817 (50%), Gaps = 75/817 (9%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKG-NCLDLFATNVL-----LNVYVKLNRLPDAT 111
           S   S + C    +L+    +H Q+ K G N   L  TN++     +  +  L     A 
Sbjct: 35  SPTGSFKKCKTMTELKQ---LHSQITKNGLNHHPLSLTNLISSCTEMGTFESLEYAQKAL 91

Query: 112 KLFDEMPERNTIS-----FVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV 166
           +LF    E N I      F + I+G++      +A+ +F  L   G   + F F   L  
Sbjct: 92  ELF---IEDNGIMGTHYMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSA 148

Query: 167 LVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN------ 220
                       V   + K+G + + FV  +LI  +  CG ++  R+VFD +        
Sbjct: 149 CTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSW 208

Query: 221 ----------DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALK 270
                      C++EA++ F +M  VG +PN+ T   V+ AC  L  +++ +    C  +
Sbjct: 209 TSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGE 268

Query: 271 TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVEL 330
              E++  +  AL+D+Y K G I  AR+IF+E   K+++ ++ +++ Y +  L+ + + +
Sbjct: 269 LELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAV 328

Query: 331 FCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAK 390
              M +    P++ T +S + AC+ ++ +  G   H  V+R GL     V NA++++Y K
Sbjct: 329 LGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMK 388

Query: 391 CGR-------------------------------MENSVELFAESPKRNHVTWNTMIVGY 419
           CG+                               ME++ ++F+  P  + V+WNTMI   
Sbjct: 389 CGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGAL 448

Query: 420 VQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDV 479
           VQ     +A+ +F  M  E + A +VT   V  AC  L AL+    +H    K +   D+
Sbjct: 449 VQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDM 508

Query: 480 VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
            +  AL+DM+A+CG    A  VF+ M   +  +W A I   +M G     +++FD M Q+
Sbjct: 509 HLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQ 568

Query: 540 GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDK 599
           G +P+ + FV +L+A S+GGL+EQG   F+SM   YGI P   HY  MV LLGRAG L +
Sbjct: 569 GIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSE 628

Query: 600 AAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAM 659
           A  LI  +  +P+ +IW +LL AC +H NV+I   +A+ I + +PE    HVLLSNIYA 
Sbjct: 629 ALSLINSMQMEPNDVIWGSLLAACRVHKNVDIAAYAAERISELDPERTGIHVLLSNIYAS 688

Query: 660 ARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMK 708
           A  W           EK A K PG S IE  G +  F  GD SH +M  I  ML+ +  +
Sbjct: 689 AGRWDDVAKVRLHLKEKGAHKMPGSSSIEINGKIFEFTTGDESHPEMTHIEPMLKEICCR 748

Query: 709 SRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDC 768
            R  GY+PDL+ VL DV E EKE  L  HSEKLA+AFAL       PIR+ KNLRIC DC
Sbjct: 749 LRDIGYVPDLTNVLLDVNEKEKEYLLSRHSEKLAIAFALISTGQGMPIRVAKNLRICSDC 808

Query: 769 HTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           H+  K++SK   REII+RD +RFH FQ G CSCGD+W
Sbjct: 809 HSFAKLVSKSYSREIIVRDNNRFHFFQQGFCSCGDYW 845


>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
           [Brassica oleracea]
          Length = 968

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 265/794 (33%), Positives = 425/794 (53%), Gaps = 51/794 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           ++ ++   +++C    ++Q  + +H  V+K     D+F +N L++ Y     + DA ++F
Sbjct: 183 DNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVF 242

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             MPERN +S+ + I+ ++ +    E   L   +  +  E+   AFT  +  L ++    
Sbjct: 243 KIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEI---AFTPDVATLATV--LP 297

Query: 175 LC---------PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--------- 216
           +C           V     KL  D    V  AL+D +S CGC+  A+ +F          
Sbjct: 298 VCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVS 357

Query: 217 -----GLFNDC--FEEALNFFSQMRAVG--FKPNNFTFAFVLKACLGLDTIRVAKSAHGC 267
                G F+      +  +   QM A G   + +  T    +  C     +   K  H  
Sbjct: 358 WNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCY 417

Query: 268 ALKTCY-EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTD---L 323
           +LK  +   +  VA A +  Y K G +S A R+F  +  K V  W+ +I  Y+Q+    L
Sbjct: 418 SLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRL 477

Query: 324 SIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNA 383
           S+DA   + +M+ + + P+ FT  S+L AC+ ++ L LG ++H L++R  L  D FV  +
Sbjct: 478 SLDA---YFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYIS 534

Query: 384 LMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPAT 443
           L+ +Y  CG +  +  LF     +  V+WNTM+ GY+Q G   +A+ +F +M+   V   
Sbjct: 535 LLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPC 594

Query: 444 EVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFD 503
           E++  SV  AC+ L +L  G + H   +K   + +  +A ++IDMYAK GS+ ++  VF+
Sbjct: 595 EISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFN 654

Query: 504 MMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQ 563
            + + +  SWNAM+ GY +HG + E +K+F+ MQ+ G  P+ LTF+GVL+AC++ GL+ +
Sbjct: 655 GLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHE 714

Query: 564 GEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKL-IEGIPFQPSVMIWRALLGA 622
           G  Y   M   +G+ P ++HY  ++ +L RAG LD+A K+  E +  +P V IW  LL +
Sbjct: 715 GLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSS 774

Query: 623 CIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEP 671
           C IH N+E+G   A  +   EPE    +VLLSN+YA +  W           E +  K+ 
Sbjct: 775 CRIHKNLEMGEKIAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEMSLRKDA 834

Query: 672 GLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKE 731
           G SWIE  G V  F AG++S      I+ +   L  +  K GY PD S+V  D+ E+EK 
Sbjct: 835 GCSWIELNGKVFSFVAGESSLDGFEEIKSLWSVLEREIGKMGYRPDTSSVQHDLSEEEKT 894

Query: 732 RYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRF 791
             L  HSEKLA+ + L +    + +R+ KNLRICVDCH A K+ISK+++REI++RD  RF
Sbjct: 895 EQLRGHSEKLAITYGLIRTSEGTTLRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRF 954

Query: 792 HHFQDGCCSCGDFW 805
           HHF++G CSCGD+W
Sbjct: 955 HHFKNGFCSCGDYW 968



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 137/452 (30%), Positives = 231/452 (51%), Gaps = 28/452 (6%)

Query: 196 TALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQM-RAVGF 238
           T +I  +S+CG  + +R VFD L                 N+ +   L  F +M    G 
Sbjct: 121 TRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFVKMITESGL 180

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
            P+NFTF  V+KAC G+  ++V  + HG  +KT    D++V+ AL+  Y  +G +S+A R
Sbjct: 181 LPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALR 240

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ-----AFVAPNQFTFVSVLQAC 353
           +F+ MP+++++ W+ MI  ++   LS +   L  +M +     AF  P+  T  +VL  C
Sbjct: 241 VFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFT-PDVATLATVLPVC 299

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
           A    + +G  +H L +++ L  +V V+NALMD+Y+KCG + ++  +F  +  +N V+WN
Sbjct: 300 ARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWN 359

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLE--EQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
           TM+ G+   G++ K   +  +ML     + A EVT  + +  C   + L    ++HC ++
Sbjct: 360 TMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSL 419

Query: 472 KANY-DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVL 530
           K  +   + +VANA +  YAKCGS++ A  VF  +      SWNA+I GYS        L
Sbjct: 420 KQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSL 479

Query: 531 KVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSL 590
             +  M+  G  P+  T   +LSACS    L+ G+     ++ N  +E     Y S++SL
Sbjct: 480 DAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNR-LERDSFVYISLLSL 538

Query: 591 LGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
               G L  A  L + +    +++ W  ++  
Sbjct: 539 YIHCGELSTAHVLFDAME-DKTLVSWNTMVNG 569



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 96/290 (33%), Positives = 171/290 (58%), Gaps = 13/290 (4%)

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM- 334
           D  +   ++ +Y+  G   ++R +F+ + KK++  W+ +I+ Y++ +L  + +E+F +M 
Sbjct: 116 DDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFVKMI 175

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
            ++ + P+ FTF  V++ACA +  + +G  +H LVV+  L+ DVFVSNAL+  Y   G +
Sbjct: 176 TESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSV 235

Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE--EQVPATE--VTYSSV 450
            +++ +F   P+RN V+WN+MI  +   G   +  ++  +M+E  +++  T    T ++V
Sbjct: 236 SDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATV 295

Query: 451 LRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE 510
           L  CA    +  G  VH L +K + D +VVV NAL+DMY+KCG I DA+++F + N+ N 
Sbjct: 296 LPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNV 355

Query: 511 VSWNAMISGYSMHGLSAEVLKVFDLMQQR-----GWRPNNLTFVGVLSAC 555
           VSWN M+ G+S  G   ++ K FDL++Q        R + +T +  +  C
Sbjct: 356 VSWNTMVGGFSAAG---DIHKTFDLLRQMLAGGGDLRADEVTILNAVPVC 402



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 110/212 (51%), Gaps = 6/212 (2%)

Query: 351 QACATMEGLDLGNQIHSLVVRVGLLS-DVFVSNALMDVYAKCGRMENSVELFAESPKRNH 409
           QA    + + LG +IH LV     LS D  +   ++ +Y+ CG  ++S  +F    K+N 
Sbjct: 89  QASGRRKDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNL 148

Query: 410 VTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ-VPATEVTYSSVLRACASLAALEPGMQVHC 468
             WN +I  Y +       + MF KM+ E  +     T+  V++ACA ++ ++ G+ VH 
Sbjct: 149 FQWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHG 208

Query: 469 LTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAE 528
           L VK     DV V+NAL+  Y   GS++DA  VF +M + N VSWN+MI  +S +GLS E
Sbjct: 209 LVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEE 268

Query: 529 VLKVFDLMQQR----GWRPNNLTFVGVLSACS 556
              +   M ++     + P+  T   VL  C+
Sbjct: 269 CFLLLGQMMEKDDEIAFTPDVATLATVLPVCA 300



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 86/163 (52%), Gaps = 4/163 (2%)

Query: 460 LEPGMQVHCLTVK-ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           ++ G ++H L  + A    D V+   +I MY+ CGS  D+R VFD +   N   WNA+IS
Sbjct: 97  IQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVIS 156

Query: 519 GYSMHGLSAEVLKVF-DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
            YS + L   VL++F  ++ + G  P+N TF  V+ AC+    ++ G A    +V    +
Sbjct: 157 SYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLV 216

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
           E       ++VS  G  G +  A ++ + +P + +++ W +++
Sbjct: 217 EDVFVS-NALVSFYGTNGSVSDALRVFKIMP-ERNLVSWNSMI 257


>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 754

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 262/780 (33%), Positives = 405/780 (51%), Gaps = 90/780 (11%)

Query: 69  NDDLQTAMTIHCQVLKK-GNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVT 127
            D  +    +HC VL+   +    +  N LL  Y +  RLP A +LFD MP+ N  +   
Sbjct: 22  RDGARVPGAVHCLVLRTLPHPPPTYVLNHLLTAYARSGRLPLARRLFDAMPDPNLFTRNA 81

Query: 128 TIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLG 187
            +     +    +   LF+++ +                                     
Sbjct: 82  LLSALAHARLLPDMDRLFASMPQR------------------------------------ 105

Query: 188 HDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAF 247
              +A    ALI  FS  G    A   +  L     EEA+   +++R     P+  T + 
Sbjct: 106 ---DAVSYNALIAGFSGAGAPARAAGAYRALLR---EEAVVDGARVR-----PSRITMSG 154

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
           ++ A   L    + +  H   ++  +    +    L+D+Y K G I +A+R+F+EM  K+
Sbjct: 155 MVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKN 214

Query: 308 V-------------------------------IPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           V                               I W+ M+    Q  L  +A+++F RMR 
Sbjct: 215 VVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRA 274

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             V  +Q+TF S+L AC  +   + G QIH+  +R     ++FV +AL+D+Y+KC  +  
Sbjct: 275 EGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRL 334

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           +  +F     +N ++W  MIVGY Q G   +A+ +FS+M  + +   + T  SV+ +CA+
Sbjct: 335 AEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCAN 394

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           LA+LE G Q HC+ + +     + V++AL+ +Y KCGSI DA  +FD M   ++VS+ A+
Sbjct: 395 LASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTAL 454

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           +SGY+  G + E + +F+ M  +G +PN +TF+GVLSACS  GL+E+G +YF SM  ++G
Sbjct: 455 VSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHG 514

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
           I    +HYT M+ L  R+G L +A + I  +P  P  + W  LL AC +  ++EIG+ +A
Sbjct: 515 IVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRLRGDMEIGKWAA 574

Query: 637 QHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYF 685
           +++L  +P++ A++VLL +++A    W + A            KEPG SWI+ +  VH F
Sbjct: 575 ENLLKTDPQNPASYVLLCSMHASKGEWSEVALLRRGMRDRQVKKEPGCSWIKYKNRVHIF 634

Query: 686 RAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAF 745
            A D SH     I   L+WLN K  + GY PD+S+VL DV + EK   L  HSEKLA+AF
Sbjct: 635 SADDQSHPFSGTIYEKLQWLNSKMAEEGYKPDVSSVLHDVADAEKVHMLSNHSEKLAIAF 694

Query: 746 ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            L  +P   PIR++KNLR+CVDCH A K ISKI  R+I++RD  RFH F +G CSCGDFW
Sbjct: 695 GLIFVPEEMPIRVVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSNGICSCGDFW 754



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 129/430 (30%), Positives = 199/430 (46%), Gaps = 71/430 (16%)

Query: 254 GLDTIRVAKSAHGCALKTC-YEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWS 312
           G D  RV  + H   L+T  +    YV   LL  Y +SG +  ARR+F+ MP  ++   +
Sbjct: 21  GRDGARVPGAVHCLVLRTLPHPPPTYVLNHLLTAYARSGRLPLARRLFDAMPDPNLFTRN 80

Query: 313 FMIARYAQTDLSIDAVELFCRMRQ------------------------------------ 336
            +++  A   L  D   LF  M Q                                    
Sbjct: 81  ALLSALAHARLLPDMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVV 140

Query: 337 --AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAK---- 390
             A V P++ T   ++ A + +    LG Q+H  ++R+G  +  F  + L+D+YAK    
Sbjct: 141 DGARVRPSRITMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLI 200

Query: 391 ---------------------------CGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
                                      C  +E +  +F     R+ +TW TM+ G  Q G
Sbjct: 201 GDAKRVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNG 260

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN 483
              +A+ +F +M  E V   + T+ S+L AC +LAA E G Q+H  T++  YD ++ V +
Sbjct: 261 LQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGS 320

Query: 484 ALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRP 543
           AL+DMY+KC SI  A  VF  M   N +SW AMI GY  +G   E ++VF  MQ  G +P
Sbjct: 321 ALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKP 380

Query: 544 NNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKL 603
           N+ T   V+S+C+N   LE+G A F  M    G+ P I   +++V+L G+ G ++ A +L
Sbjct: 381 NDFTLGSVISSCANLASLEEG-AQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRL 439

Query: 604 IEGIPFQPSV 613
            + +PF   V
Sbjct: 440 FDEMPFHDQV 449



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 121/286 (42%), Gaps = 28/286 (9%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
            + +++ + L +C      +    IH   ++     ++F  + L+++Y K   +  A  +
Sbjct: 279 IDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAV 338

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           F  M  +N IS+   I GY  +    EAV +FS +  +G + N F   + +    ++   
Sbjct: 339 FRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASL 398

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-FNDCF--------- 223
           E            G      V +AL+  +  CG +E A ++FD + F+D           
Sbjct: 399 EEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGY 458

Query: 224 ------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
                 +E ++ F +M   G KPN  TF  VL AC      R      GC+     + D 
Sbjct: 459 AQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSAC-----SRSGLVEKGCSYFHSMQQDH 513

Query: 278 YVAV------ALLDLYTKSGEISNARRIFEEMPK-KDVIPWSFMIA 316
            + +       ++DLY++SG +  A     +MP+  D I W+ +++
Sbjct: 514 GIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLS 559



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 84/217 (38%), Gaps = 17/217 (7%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +  + + SC     L+     HC  L  G    +  ++ L+ +Y K   + DA +LF
Sbjct: 381 NDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLF 440

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           DEMP  + +S+   + GY    +  E + LF  +  +G + N   F   L      G  E
Sbjct: 441 DEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVE 500

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMR 234
                  C Y   H      G  L+D    C    ++R       +   +EA  F  QM 
Sbjct: 501 K-----GCSYF--HSMQQDHGIVLLDDHYTCMIDLYSR-------SGRLKEAEEFIRQMP 546

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT 271
                P+   +A +L AC     + + K A    LKT
Sbjct: 547 RC---PDAIGWATLLSACRLRGDMEIGKWAAENLLKT 580


>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
 gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
          Length = 829

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 264/793 (33%), Positives = 417/793 (52%), Gaps = 53/793 (6%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCL--DLFATNVLLNVYVKLNRLPDATKLFD 115
           +YA  LQ C +   L     IH   +K  N L  +L   N ++++Y   +   DA   FD
Sbjct: 45  TYARLLQRCARAQALPEGRKIHSLAVKH-NLLPGNLILGNHIVSMYAHCDSPGDAKAAFD 103

Query: 116 EMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAEL 175
            + +RN  S+   +  + +S Q  E +     + ++G  + P A T F+  L S G  E 
Sbjct: 104 ALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDG--VRPDAVT-FITALGSCGDPES 160

Query: 176 CPCVFACVYKLGHDS----NAFVGTALIDAFSVCGCVEFARKVFDGL------------- 218
                  ++++  DS    +  V  AL++ +  CG +  A++VF  +             
Sbjct: 161 LRDGIR-IHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMA 219

Query: 219 ----FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
                +    EAL  F  M  +G K        +L AC     ++  +  H C   + +E
Sbjct: 220 GAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFE 279

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPK--KDVIPWSFMIARYAQTDLSIDAVELFC 332
            +L VA A++ +Y + G +  AR++F+ M +  +DV+ W+ M++ Y   D   DA++L+ 
Sbjct: 280 SELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQ 339

Query: 333 RMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCG 392
           RM+   +  ++ T+VS+L AC++ E + LG  +H  +V   L  +V V NAL+ +YAKCG
Sbjct: 340 RMQ---LRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCG 396

Query: 393 RMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE-------EQVPATEV 445
               +  +F +  +R+ ++W T+I  YV+   V +A  +F +MLE       ++V    +
Sbjct: 397 SHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDAL 456

Query: 446 TYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMM 505
            + ++L ACA ++ALE G  V           D  V  A++++Y KCG I + R +FD +
Sbjct: 457 AFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGV 516

Query: 506 NDWNEVS-WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG 564
               +V  WNAMI+ Y+  G S E LK+F  M+  G RP++ +FV +L ACS+ GL +QG
Sbjct: 517 CSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQG 576

Query: 565 EAYFKSMVANY-GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGAC 623
           ++YF SM   Y  +   I+H+  +  LLGR G L +A + +E +P +P  + W +LL AC
Sbjct: 577 KSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAAC 636

Query: 624 IIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPG 672
             H +++  +  A  +L  EP     +V LSNIYA  + W           E+   KE G
Sbjct: 637 RNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKERG 696

Query: 673 LSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKER 732
           +S IE    +H F  GD +H     IR  L  L+ + ++ GY+PD   VL  V E EKER
Sbjct: 697 VSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKECGYVPDTKMVLHFVDEQEKER 756

Query: 733 YLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFH 792
            L+ HSE+LA+A  L   P  +P+R+ KNLR+C DCHTA K+ISKI  R+I++RD  RFH
Sbjct: 757 LLFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKIAGRKIVVRDPTRFH 816

Query: 793 HFQDGCCSCGDFW 805
            F+DG CSC D+W
Sbjct: 817 LFKDGKCSCQDYW 829



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 103/196 (52%), Gaps = 3/196 (1%)

Query: 436 LEEQ-VPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN-YDMDVVVANALIDMYAKCG 493
           LE+Q V A   TY+ +L+ CA   AL  G ++H L VK N    ++++ N ++ MYA C 
Sbjct: 34  LEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCD 93

Query: 494 SITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLS 553
           S  DA+  FD +   N  SW  +++ +++ G S E L+  + M+Q G RP+ +TF+  L 
Sbjct: 94  SPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALG 153

Query: 554 ACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSV 613
           +C +   L  G      MV +  +E   +   +++++  + G L  A ++   +    +V
Sbjct: 154 SCGDPESLRDG-IRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNV 212

Query: 614 MIWRALLGACIIHNNV 629
           + W  + GA  +H NV
Sbjct: 213 ISWSIMAGAHALHGNV 228


>gi|296090522|emb|CBI40853.3| unnamed protein product [Vitis vinifera]
          Length = 749

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 253/640 (39%), Positives = 363/640 (56%), Gaps = 62/640 (9%)

Query: 194 VGTALIDAFSVCGCVEFARKVFDG----------------LFNDCFEEALNFFSQMRAVG 237
           +G  LIDA+  CG V +ARKVFD                 + N   +EA++ + +M   G
Sbjct: 113 LGNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDG 172

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM-DLYVAVALLDLYTKSGEISNA 296
             P+ FTF+ V KA   L  +   + AHG ++     + +++V  AL+D+Y K G++ +A
Sbjct: 173 ILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDA 232

Query: 297 RRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM 356
           R + +++  KDV+ ++ +I  Y+      +++++F  M +  +  N++T  SVL  C  +
Sbjct: 233 RLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNL 292

Query: 357 EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMI 416
           E L  G  IH L+V+ GL S V                                TW ++I
Sbjct: 293 EDLTSGRLIHGLIVKAGLESAV--------------------------------TWTSVI 320

Query: 417 VGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD 476
           VG VQ G    A++ F +ML   +     T SSVLRAC+SLA LE G Q+H + +K   D
Sbjct: 321 VGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLD 380

Query: 477 MDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLM 536
           +D  V  ALID Y KCGS   AR VF+ + + + VS N+MI  Y+ +G   E L++F  M
Sbjct: 381 IDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGM 440

Query: 537 QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGH 596
           +  G  PNN+T++GVLSAC+N GLLE+G   F S   +  IE   +HY  MV LLGRAG 
Sbjct: 441 KDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGR 500

Query: 597 LDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNI 656
           L +A  LI  +     V+IWR LL AC IH +VE+ +     ++D  PED  THVLLSN+
Sbjct: 501 LKEAEMLINQVNIS-DVVIWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNL 559

Query: 657 YAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWL 705
           YA   +W K              K P +SW++ +  +H F AGD SH +   IR  LE L
Sbjct: 560 YASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEEL 619

Query: 706 NMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMP-PSSPIRIIKNLRI 764
             K ++ GY+PD   VL+D+ E++K R L+ HSEKLA+AFAL++    ++ IRI+KNLR+
Sbjct: 620 IEKVKELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSNYKNTTIRILKNLRV 679

Query: 765 CVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
           C DCHT +K +SKIV R+II RDV RFHHF++G CSCGD+
Sbjct: 680 CGDCHTWMKFVSKIVGRDIIARDVKRFHHFRNGLCSCGDY 719



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 130/504 (25%), Positives = 225/504 (44%), Gaps = 56/504 (11%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           Y++ +Q CI    +     I    LK+G    L   N L++ Y+K   +  A K+FDE+P
Sbjct: 81  YSSLIQQCIGIKSITDITKIQSHALKRGFHHSL--GNKLIDAYLKCGSVVYARKVFDEVP 138

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
            R+ +++ + I  Y  + +  EA+ ++  +  +G   + F F++  K    +G       
Sbjct: 139 HRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQR 198

Query: 179 VFACVYKLGHD-SNAFVGTALIDAFSVCGCVEFARKVFDG-------LFNDCF------- 223
                  LG   SN FVG+AL+D ++  G +  AR V D        LF           
Sbjct: 199 AHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHG 258

Query: 224 --EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
              E+L  F  M   G + N +T + VL  C  L+ +   +  HG  +K   E       
Sbjct: 259 EDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLE------- 311

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
                                      + W+ +I    Q      A+  F +M ++ + P
Sbjct: 312 -------------------------SAVTWTSVIVGLVQNGREEIALLKFRQMLRSSITP 346

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           N FT  SVL+AC+++  L+ G QIH++V++ GL  D +V  AL+D Y KCG  E +  +F
Sbjct: 347 NSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVF 406

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
               + + V+ N+MI  Y Q G   +A+ +FS M +  +    VT+  VL AC +   LE
Sbjct: 407 NGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLE 466

Query: 462 PGMQVHCLTVKA-NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY 520
            G  +      + N ++       ++D+  + G + +A ++ + +N  + V W  ++S  
Sbjct: 467 EGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSAC 526

Query: 521 SMHG---LSAEVL-KVFDLMQQRG 540
            +HG   ++  V+ +V DL  + G
Sbjct: 527 RIHGDVEMAKRVMNRVIDLAPEDG 550



 Score = 43.5 bits (101), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 8/162 (4%)

Query: 27  GLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKG 86
           G    A L  +Q   S+ TP +F++S        + L++C     L+    IH  V+K G
Sbjct: 327 GREEIALLKFRQMLRSSITPNSFTLS--------SVLRACSSLAMLEQGKQIHAIVMKFG 378

Query: 87  NCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFS 146
             +D +    L++ Y K      A  +F+ + E + +S  + I  Y  +    EA+ LFS
Sbjct: 379 LDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFS 438

Query: 147 TLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGH 188
            +   G E N   +   L    + G  E    +F+     G+
Sbjct: 439 GMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGN 480


>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 763

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 257/786 (32%), Positives = 415/786 (52%), Gaps = 64/786 (8%)

Query: 36  TQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATN 95
           +++ S ++ +P +    + +  ++  ++ S ++N    +A+ +   + ++ +     + N
Sbjct: 26  SKRRSTNSYSPSSVKFKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSV----SYN 81

Query: 96  VLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHEL 155
            +++ Y++  +   A  LFD+MPER+  S+   + GY  + +  EA  LF  + ++    
Sbjct: 82  AMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKK---- 137

Query: 156 NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF 215
           +  ++ A L      G+ +    VF    K+ H  N+     L+ A+   G ++ AR++F
Sbjct: 138 DVVSWNAMLSGYAQNGFVDEAREVFN---KMPH-RNSISWNGLLAAYVHNGRLKEARRLF 193

Query: 216 DGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLG-----LDTIRVAKSAHGCALK 270
           +              SQ        N     +V +  LG      D + V          
Sbjct: 194 E--------------SQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVR--------- 230

Query: 271 TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVEL 330
                D+     ++  Y + G++S A+R+F E P +DV  W+ M++ Y Q  +  +A + 
Sbjct: 231 -----DVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKY 285

Query: 331 FCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAK 390
           F  M       N+ ++ ++L      + + +  ++   +       ++   N ++  Y +
Sbjct: 286 FDEM----PVKNEISYNAMLAGYVQYKKMVIAGELFEAMP----CRNISSWNTMITGYGQ 337

Query: 391 CGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
            G +  + +LF   P+R+ V+W  +I GY Q G   +A+ MF +M  +   +   T+S  
Sbjct: 338 NGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCA 397

Query: 451 LRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE 510
           L  CA +AALE G QVH   VKA ++    V NAL+ MY KCGS  +A  VF+ + + + 
Sbjct: 398 LSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDV 457

Query: 511 VSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKS 570
           VSWN MI+GY+ HG   + L +F+ M++ G +P+ +T VGVLSACS+ GL+++G  YF S
Sbjct: 458 VSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYS 517

Query: 571 MVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
           M  +Y ++P  +HYT M+ LLGRAG L++A  L+  +PF P    W ALLGA  IH N E
Sbjct: 518 MDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTE 577

Query: 631 IGRLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQ 679
           +G  +A+ +   EP++   +VLLSN+YA +  W           E    K  G SW+E Q
Sbjct: 578 LGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSWVEVQ 637

Query: 680 GMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSE 739
             +H F  GD  H + + I   LE L++K R+ GY+     VL DV E+EKE  L  HSE
Sbjct: 638 NKIHTFSVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSE 697

Query: 740 KLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCC 799
           KLA+AF +  +P   PIR++KNLR+C DCH AIK ISKIV R II+RD HRFHHF +G C
Sbjct: 698 KLAVAFGILTIPAGRPIRVMKNLRVCQDCHNAIKHISKIVGRLIILRDSHRFHHFSEGIC 757

Query: 800 SCGDFW 805
           SCGD+W
Sbjct: 758 SCGDYW 763


>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Brachypodium distachyon]
          Length = 614

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 219/568 (38%), Positives = 343/568 (60%), Gaps = 12/568 (2%)

Query: 249 LKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDV 308
           + AC+    +   +  H   +K  Y   +Y+A  L+ LY + G + +AR + + MP+++V
Sbjct: 48  ITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPERNV 107

Query: 309 IPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSL 368
           + W+ MI+ Y+Q+    +A+ELF RM +A    N+FT  +VL +C   + +    Q+HSL
Sbjct: 108 VSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHSL 167

Query: 369 VVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKA 428
           VV+    S +FV ++L+D+Y K G ++ + ++F   P+R+ V+   +I GY QLG   +A
Sbjct: 168 VVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDEA 227

Query: 429 MIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDM 488
           + +F ++    +    VT++++L + + LA+L  G QVH L ++      +V+ N+LIDM
Sbjct: 228 LDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDM 287

Query: 489 YAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTF 548
           Y+KCG +  +R VFD M   + +SWNAM+ GY  HG+  EV+++F  M +   +P+++T 
Sbjct: 288 YSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTEE-VKPDSVTL 346

Query: 549 VGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIP 608
           + VLS CS+GGL+++G   F  +V        I HY  ++ LLGR+G L KA  LIE +P
Sbjct: 347 LAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALDLIEHMP 406

Query: 609 FQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW----- 663
           F+P+  IW +LLGAC +H NV +G + AQ +LD EP +   +V+LSNIYA A  W     
Sbjct: 407 FEPTPAIWGSLLGACRVHINVSVGEVVAQKLLDMEPGNAGNYVILSNIYAAAGMWKDVFR 466

Query: 664 ------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPD 717
                 E   +KEP  SWI    ++H F + +  H     I   ++ + +  + AG++PD
Sbjct: 467 VRKLMLENTVTKEPAKSWIILDKVIHTFHSSERFHPRKKDINAKIKEVYVDVKAAGFVPD 526

Query: 718 LSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISK 777
           LS VL DV +++KER L  HSEKLA+ F L   PP   I+++KNLRICVDCH   K +SK
Sbjct: 527 LSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIQVMKNLRICVDCHNFAKFVSK 586

Query: 778 IVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +  REI +RD +RFH  +DG C+CGD+W
Sbjct: 587 VYGREISLRDKNRFHLLKDGACTCGDYW 614



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 190/363 (52%), Gaps = 19/363 (5%)

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDC 222
           V A + K  +    ++ T LI  +  CG ++ AR V DG+                 +  
Sbjct: 63  VHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPERNVVSWTAMISGYSQSGR 122

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
             EAL  F +M   G K N FT A VL +C    +I+  +  H   +KT +E  ++V  +
Sbjct: 123 HAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHSLVVKTNFESHMFVGSS 182

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           LLD+Y KSG I  AR++F+ +P++D +  + +I+ YAQ  L  +A++LF ++  + +  N
Sbjct: 183 LLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDEALDLFRQLYSSGMQCN 242

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
             TF ++L + + +  L+ G Q+H L++R  L   + + N+L+D+Y+KCG++  S  +F 
Sbjct: 243 YVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDMYSKCGKLLYSRRVFD 302

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
             P+R+ ++WN M++GY + G +G+ ++   + + E+V    VT  +VL  C+    ++ 
Sbjct: 303 NMPQRSAISWNAMLMGYGRHG-IGQEVVQLFRTMTEEVKPDSVTLLAVLSGCSHGGLVDE 361

Query: 463 GMQVHCLTVK-ANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGY 520
           G+ +  L VK  N  + +     +ID+  + G +  A  L+  M  +     W +++   
Sbjct: 362 GLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALDLIEHMPFEPTPAIWGSLLGAC 421

Query: 521 SMH 523
            +H
Sbjct: 422 RVH 424



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 184/378 (48%), Gaps = 19/378 (5%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
           H Y  ++ +C++   L     +H  ++K      ++    L+ +YV+   L DA  + D 
Sbjct: 42  HDYDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDG 101

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
           MPERN +S+   I GY+ S +  EA+ LF  + R G + N F     L         +  
Sbjct: 102 MPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQV 161

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN----DCF--------- 223
             V + V K   +S+ FVG++L+D +   G ++ ARKVFD L       C          
Sbjct: 162 EQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQL 221

Query: 224 ---EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
              +EAL+ F Q+ + G + N  TF  +L +  GL ++   K  HG  L+      + + 
Sbjct: 222 GLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQ 281

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
            +L+D+Y+K G++  +RR+F+ MP++  I W+ M+  Y +  +  + V+LF  M +  V 
Sbjct: 282 NSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTEE-VK 340

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVR-VGLLSDVFVSNALMDVYAKCGRMENSVE 399
           P+  T ++VL  C+    +D G  I  L+V+    +  +     ++D+  + G+++ +++
Sbjct: 341 PDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALD 400

Query: 400 LFAESP-KRNHVTWNTMI 416
           L    P +     W +++
Sbjct: 401 LIEHMPFEPTPAIWGSLL 418



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 150/275 (54%), Gaps = 2/275 (0%)

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           + + + AC   + L  G Q+H+ +V+      V+++  L+ +Y +CG ++++  +    P
Sbjct: 44  YDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMP 103

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
           +RN V+W  MI GY Q G   +A+ +F +ML     A E T ++VL +C    +++   Q
Sbjct: 104 ERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQ 163

Query: 466 VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGL 525
           VH L VK N++  + V ++L+DMY K G+I +AR VFDM+ + + VS  A+ISGY+  GL
Sbjct: 164 VHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGL 223

Query: 526 SAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYT 585
             E L +F  +   G + N +TF  +L++ S    L  G+     ++    +   I    
Sbjct: 224 DDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQ-VHGLILRKELPFFIVLQN 282

Query: 586 SMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
           S++ +  + G L  + ++ + +P Q S + W A+L
Sbjct: 283 SLIDMYSKCGKLLYSRRVFDNMP-QRSAISWNAML 316



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 113/273 (41%), Gaps = 30/273 (10%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  + AT L SC  +  +Q    +H  V+K      +F  + LL++Y K   + +A K+F
Sbjct: 141 NEFTLATVLTSCPVHQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVF 200

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D +PER+T+S    I GY       EA+ LF  L+  G + N   FT  L  L  +    
Sbjct: 201 DMLPERDTVSCTAIISGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLN 260

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------- 218
               V   + +        +  +LID +S CG + ++R+VFD +                
Sbjct: 261 YGKQVHGLILRKELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYG 320

Query: 219 FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL-------GLDTIRVAKSAHGCALKT 271
            +   +E +  F  M     KP++ T   VL  C        GLD   +        +  
Sbjct: 321 RHGIGQEVVQLFRTMTE-EVKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHI 379

Query: 272 CYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
            +    Y  V  +DL  +SG++  A  + E MP
Sbjct: 380 GH----YGCV--IDLLGRSGQLQKALDLIEHMP 406


>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 286/834 (34%), Positives = 424/834 (50%), Gaps = 85/834 (10%)

Query: 54  FNSHSYATSLQSCI--QNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           F++ S  T L S +  Q   L +A   H Q+L +G   D      ++++Y+  N    A 
Sbjct: 41  FSTASSTTDLTSTLFHQCKSLASAELTHQQLLVQGLPHD---PTHIISMYLTFNSPAKAL 97

Query: 112 KLFDEM-PERNTISFVTTIQGYTVSSQFVEAV-GLFSTLHREGHELNPFAFTAFLKVLVS 169
            +   + P  +T+ +   +   +V   F+E V  L+  + R G   + + F   LK    
Sbjct: 98  SVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGE 157

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEE---- 225
           +        V A V+  G + N FVG  L+  +  CG  E AR+VFD +      +    
Sbjct: 158 IPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSW 217

Query: 226 ---------------ALNFFSQM-RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCAL 269
                          A+  F +M   +G +P+  +   VL AC  +      K  HG AL
Sbjct: 218 NSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYAL 277

Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFM--------------- 314
           ++    D++V  A++D+Y K G +  A ++FE M  KDV+ W+ M               
Sbjct: 278 RSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALG 337

Query: 315 --------------------IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
                               IA YAQ  L  +A+++F +M      PN  T VS+L  CA
Sbjct: 338 LFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCA 397

Query: 355 TMEGLDLGNQIHSLVVRVGL-------LSDVFVSNALMDVYAKCGRMENSVELFAESPKR 407
           +   L  G + H   ++  L         D+ V NAL+D+Y+KC   + +  +F   P +
Sbjct: 398 SAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPK 457

Query: 408 NH--VTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ--VPATEVTYSSVLRACASLAALEPG 463
           +   VTW  +I G  Q GE  +A+ +FS+ML+    V     T S  L ACA L AL  G
Sbjct: 458 DRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFG 517

Query: 464 MQVHCLTVKANYDMDVV-VANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
            Q+H   ++  ++  ++ VAN LIDMY+K G +  AR+VFD M+  N VSW ++++GY M
Sbjct: 518 RQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGM 577

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
           HG   E L++F  MQ+    P+ +TFV VL ACS+ G+++QG  YF  M  ++G+ P  E
Sbjct: 578 HGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAE 637

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDF 642
           HY  MV LL RAG LD+A +LI G+P +P+  +W ALL AC ++ NVE+G  +A  +L+ 
Sbjct: 638 HYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLEL 697

Query: 643 EPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTS 691
           E  ++ ++ LLSNIYA AR W+  A            K PG SW++ +     F AGD S
Sbjct: 698 ESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWS 757

Query: 692 HADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMP 751
           H     I  +L  L  + +  GY+PD    L DV ++EK   L  HSEKLALA+ +    
Sbjct: 758 HPMSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTA 817

Query: 752 PSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           P +PIRI KNLR C DCH+A   IS I++ EII+RD  RFHHF++G CSC  +W
Sbjct: 818 PGAPIRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 871



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 74/291 (25%), Positives = 113/291 (38%), Gaps = 43/291 (14%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLK---------KGNCLDLFATNVLLNVYV 102
           SE N  +  + L  C     L      HC  +K          G+  DL   N L+++Y 
Sbjct: 382 SEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGD--DLMVINALIDMYS 439

Query: 103 KLNRLPDATKLFDEMP--ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAF 160
           K      A  +FD +P  +R+ +++   I G     +  EA+ LFS + +  + + P AF
Sbjct: 440 KCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAF 499

Query: 161 T--AFLKVLVSMGWAELCPCVFACVYKLGHDSNA-FVGTALIDAFSVCGCVEFARKVFDG 217
           T    L     +G       + A V +   +S   FV   LID +S  G V+ AR VFD 
Sbjct: 500 TISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDN 559

Query: 218 L----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVA 261
           +                 +   EEAL  F +M+ V   P+  TF  VL AC     +   
Sbjct: 560 MHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVD-- 617

Query: 262 KSAHGCALKTCYEMDLYVAVA------LLDLYTKSGEISNARRIFEEMPKK 306
               G         D  V         ++DL +++G +  A  +   MP K
Sbjct: 618 ---QGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMK 665


>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g13880-like [Cucumis sativus]
          Length = 839

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/808 (33%), Positives = 415/808 (51%), Gaps = 37/808 (4%)

Query: 32  AALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDL 91
           A L +   S+S   P   S     S  Y   +QS  +   L     +H  ++K      L
Sbjct: 35  ATLGSVSLSSSQVFPAYSSTFLLESVDYVKLVQSATKTGKLNHGKLVHSHMIKTSFRPCL 94

Query: 92  FATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHRE 151
           F  N LLN+Y K      A KLFD+M + N +++ + I GY   S   + + LF    R 
Sbjct: 95  FLQNNLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRL 154

Query: 152 GHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFA 211
           G +L+ +     L      G       +   +   G  S   +  +LID +S CG V++A
Sbjct: 155 GLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYA 214

Query: 212 RKVFDG----------------LFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLG- 254
           R +FD                 + N  +EE L    +M   G   N +T    LKAC   
Sbjct: 215 RILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSN 274

Query: 255 LDTIRVAKSA-HGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSF 313
            +  ++  +  H  A+K    +D+ V  ALLD+Y K+G + +A +IF++M  K+V+ ++ 
Sbjct: 275 FNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNA 334

Query: 314 MIARYAQTDLSID-----AVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSL 368
           M+A   Q +   D     A+ LF  M+   + P+ FT+ S+L+AC  +E      Q+H+L
Sbjct: 335 MMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHAL 394

Query: 369 VVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKA 428
           + + GLLSD ++ + L+D+Y+  G M +++  F        V    MI GY+Q GE   A
Sbjct: 395 MCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIXGYLQNGEFESA 454

Query: 429 MIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDM 488
           + +F ++L  +    E   S+++ +CA++  L  G Q+     K       +  N+ I M
Sbjct: 455 LSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWM 514

Query: 489 YAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTF 548
           YAK G +  A L F  M + + VSW+ MI   + HG + E L+ F+LM+  G  PN+  F
Sbjct: 515 YAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAF 574

Query: 549 VGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIP 608
           +GVL ACS+ GL+E+G  YF +M  +Y ++  ++H   +V LLGRAG L  A  LI  + 
Sbjct: 575 LGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLG 634

Query: 609 FQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW----- 663
           F+   ++WRALL AC IH +    +  AQ +++ EP   A++VLL NIY  A +      
Sbjct: 635 FEHEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAASK 694

Query: 664 ------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPD 717
                 E+   KEPGLSWI+    V+ F +GD SH +   I   L+ +   +++     D
Sbjct: 695 VRTLMEERRIKKEPGLSWIQIGDKVYSFVSGDRSHKNSGQIYAKLDEMLATTKRLDSAKD 754

Query: 718 LSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISK 777
              +L    E E    +  HSEKLA+AF +  +  S+P+R++KNLRIC+DCH  +K+ S 
Sbjct: 755 ---ILGYKIEHEHLTNVNYHSEKLAVAFGVLYLSESAPVRVMKNLRICLDCHMTMKLFSI 811

Query: 778 IVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           + +RE+I+RD  RFHHF+DG CSCGD+W
Sbjct: 812 VEKRELIVRDSVRFHHFKDGSCSCGDYW 839


>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Vitis vinifera]
          Length = 629

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 233/596 (39%), Positives = 346/596 (58%), Gaps = 16/596 (2%)

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
           F+EALN + QM A G  PN FTF F  K+C  L         HG  +KT  E + +V  +
Sbjct: 37  FQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHVIKTGCEPEPFVQTS 96

Query: 283 LLDLYTKSGEISNARRIFEE--MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
           L+ +Y K   I++AR++F+E    +   + ++ +IA Y+      DAV LF +MR+  V+
Sbjct: 97  LISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSDAVLLFRQMRKEGVS 156

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
            N  T + ++  CA    L  G  +H+  VR GL  D+ V N L+ +Y +CG ++ + +L
Sbjct: 157 VNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARKL 216

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F   P++  +TWN MI GY Q G  G  + ++ KM    +    VT   VL +CA L A 
Sbjct: 217 FDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAH 276

Query: 461 EPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY 520
             G +V      + +  +  + NALI+MYA+CG++  AR +FD M + N +SW A+I+GY
Sbjct: 277 AAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGY 336

Query: 521 SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPC 580
            MHG     +++FD M      P+   FV VLSACS+ GL E+G  YF +M  +YG++P 
Sbjct: 337 GMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPG 396

Query: 581 IEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHIL 640
            EHY+ +V LLGRAG L++A KLI  +  +P   +W ALLGAC IH NVE+  L+ + ++
Sbjct: 397 PEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIHRNVELAELAFEKVI 456

Query: 641 DFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGD 689
           +FEP +   +VLLSNI++ A +            E+   KEPG S++E QG +H F AGD
Sbjct: 457 EFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLKKEPGCSYVEYQGRIHLFLAGD 516

Query: 690 TSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFK 749
            +H     I  ML+ L    ++ G   D     ++ R +E    + VHSEKLA+AF L  
Sbjct: 517 RTHPQAQEIYHMLDGLEDIIKRRGGSNDND---QESRNEELITGMGVHSEKLAIAFGLIN 573

Query: 750 MPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
             P + I +IKNLR+C DCH  +K++S+IV R++++RD  RFHHF++G CSC D+W
Sbjct: 574 TEPGTEITVIKNLRVCGDCHLFLKLVSEIVDRQLVVRDATRFHHFKNGVCSCKDYW 629



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/438 (25%), Positives = 197/438 (44%), Gaps = 24/438 (5%)

Query: 107 LPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV 166
            P A K  D   +  T S+   ++       F EA+ L+  +   G   N F F    K 
Sbjct: 8   FPYANKWLD--LQNTTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKS 65

Query: 167 LVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG--------- 217
             S+        +   V K G +   FV T+LI  +  C  +  ARKVFD          
Sbjct: 66  CASLSLPLAGSQLHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAV 125

Query: 218 ---------LFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCA 268
                      N  F +A+  F QMR  G   N  T   ++  C G   +    S H C+
Sbjct: 126 CYNALIAGYSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACS 185

Query: 269 LKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAV 328
           ++   + DL V   LL +Y + G +  AR++F+ MP+K +I W+ MI+ YAQ  L+   +
Sbjct: 186 VRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVL 245

Query: 329 ELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVY 388
           +L+ +M    + P+  T V VL +CA +     G ++   +   G   + F+ NAL+++Y
Sbjct: 246 DLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMY 305

Query: 389 AKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYS 448
           A+CG +  +  +F    ++N ++W  +I GY   G+   A+ +F +M+          + 
Sbjct: 306 ARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFV 365

Query: 449 SVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDAR-LVFDMM 505
           SVL AC+     E G+  +   ++ +Y +     +   ++D+  + G + +AR L+  M 
Sbjct: 366 SVLSACSHAGLTEKGL-YYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMS 424

Query: 506 NDWNEVSWNAMISGYSMH 523
            + +   W A++    +H
Sbjct: 425 VEPDGAVWGALLGACKIH 442



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 103/403 (25%), Positives = 179/403 (44%), Gaps = 20/403 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N+ ++  + +SC           +H  V+K G   + F    L+++Y K + +  A K+F
Sbjct: 55  NAFTFPFAFKSCASLSLPLAGSQLHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVF 114

Query: 115 DE-MPERN-TISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           DE    RN  + +   I GY+++S+F +AV LF  + +EG  +N       + V      
Sbjct: 115 DENHHSRNLAVCYNALIAGYSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIH 174

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------------- 219
                 + AC  + G D +  VG  L+  +  CG V+FARK+FDG+              
Sbjct: 175 LGFGTSLHACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISG 234

Query: 220 ---NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
              N      L+ + +M   G  P+  T   VL +C  L      +        + +  +
Sbjct: 235 YAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFN 294

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
            ++  AL+++Y + G +  AR IF+ M +K+VI W+ +IA Y        AV+LF  M  
Sbjct: 295 PFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMIS 354

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR-VGLLSDVFVSNALMDVYAKCGRME 395
           +   P+   FVSVL AC+     + G    + + R  GL       + ++D+  + GR+E
Sbjct: 355 SDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLE 414

Query: 396 NSVELFAE-SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
            + +L    S + +   W  ++        V  A + F K++E
Sbjct: 415 EARKLIGSMSVEPDGAVWGALLGACKIHRNVELAELAFEKVIE 457


>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
 gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
          Length = 720

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 241/656 (36%), Positives = 350/656 (53%), Gaps = 56/656 (8%)

Query: 196 TALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVG-FKPNNFTFAFVLKACLG 254
           TA +   ++ GC    R          + + +  F++M A G   PN F  A V++ C G
Sbjct: 75  TAPVWTLTISGCARRGR----------YADGMRAFAEMLAEGEATPNAFVLAAVVRCCAG 124

Query: 255 LDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIF-------------- 300
           +  +   K  HG  L+    +D+ +  A+LD+Y K G+   ARR+F              
Sbjct: 125 MGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWNIA 184

Query: 301 -----------------EEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
                            +E P +D   W+ +I+   ++  + DA+    RM QA V  N 
Sbjct: 185 IGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNH 244

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
           +T+ +       +   DLG Q+H  V+   L  D FV ++LMD+Y KCG +E +  +F  
Sbjct: 245 YTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDH 304

Query: 404 -SP--KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
            SP  +  +  W+TM+ GYVQ G   +A+ +F +ML E V A   T +SV  ACA++  +
Sbjct: 305 WSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMV 364

Query: 461 EPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY 520
           E G QVH    K  Y +D  +A+A++DMYAKCG++ DAR +FD     N   W +M+  Y
Sbjct: 365 EQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSY 424

Query: 521 SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPC 580
           + HG     +++F+ M      PN +T VGVLSACS+ GL+ +GE YFK M   YGI P 
Sbjct: 425 ASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPS 484

Query: 581 IEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHIL 640
           IEHY  +V L GR+G LDKA   IE        ++W+ LL AC +H + E  +L+++ ++
Sbjct: 485 IEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSACRLHQHNEYAKLASEKLV 544

Query: 641 DFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGD 689
             E  D  ++V+LSNIYA    W           E+   K+PG SWI  +  VH F AGD
Sbjct: 545 QLEQCDAGSYVMLSNIYATNNKWHDTFELRVSMQERKVRKQPGRSWIHLKNTVHTFVAGD 604

Query: 690 TSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFK 749
            SH     I   LE L  + ++ GY      V+ DV ++++E  L  HSEKLA+AF +  
Sbjct: 605 ASHPQSAEIYAYLEKLVERLKEIGYTSRTDLVVHDVEDEQRETALKFHSEKLAIAFGIIS 664

Query: 750 MPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            P  +P+RI KNLR+C DCH AIK IS    REI++RD++RFHHF+D  CSC DFW
Sbjct: 665 TPSGTPLRIFKNLRVCEDCHEAIKYISLATGREIVVRDLYRFHHFKDASCSCEDFW 720



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/483 (24%), Positives = 217/483 (44%), Gaps = 59/483 (12%)

Query: 97  LLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHEL- 155
           +L  +V+  R  DA  +FDE P R    +  TI G     ++ + +  F+ +  EG    
Sbjct: 51  VLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATP 110

Query: 156 NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF 215
           N F   A ++    MG  E    V   + + G   +  +  A++D ++ CG  E AR+VF
Sbjct: 111 NAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVF 170

Query: 216 DGL-----------FNDCFE------------------------------------EALN 228
             +              C +                                    +AL+
Sbjct: 171 GAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALS 230

Query: 229 FFSQMRAVGFKPNNFTF--AFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
              +M   G   N++T+  AFVL   L L  +   +  HG  L    E D +V  +L+D+
Sbjct: 231 HLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDL--GRQLHGRVLIAALEGDAFVRSSLMDM 288

Query: 287 YTKSGEISNARRIFEE---MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
           Y K G +  A  +F+    + +     WS M+A Y Q     +A++LF RM +  VA ++
Sbjct: 289 YCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADR 348

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
           FT  SV  ACA +  ++ G Q+H  V ++    D  +++A++D+YAKCG +E++  +F  
Sbjct: 349 FTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDR 408

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
           +  +N   W +M+  Y   G+   A+ +F +M  E++   E+T   VL AC+ +  +  G
Sbjct: 409 ACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEG 468

Query: 464 MQVHCLTVKANYDM--DVVVANALIDMYAKCGSITDARLVFDMMNDWNE-VSWNAMISGY 520
            +++   ++  Y +   +   N ++D+Y + G +  A+   +  N  +E + W  ++S  
Sbjct: 469 -ELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSAC 527

Query: 521 SMH 523
            +H
Sbjct: 528 RLH 530



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 187/416 (44%), Gaps = 57/416 (13%)

Query: 261 AKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQ 320
            ++A G +L+       +   ++L  + +     +AR +F+E P +    W+  I+  A+
Sbjct: 29  GRAARGGSLEARLATVPHERASVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCAR 88

Query: 321 TDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVF 379
                D +  F  M  +    PN F   +V++ CA M  ++ G ++H  ++R G+  DV 
Sbjct: 89  RGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVV 148

Query: 380 VSNALMDVYAKCGRME-------------------------------NSVELFAESPKRN 408
           + NA++D+YAKCG+ E                                S++LF ESP R+
Sbjct: 149 LCNAVLDMYAKCGQFERARRVFGAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLRD 208

Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHC 468
             +WNT+I G ++ G    A+    +M +  V     TYS+       L   + G Q+H 
Sbjct: 209 TTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHG 268

Query: 469 LTVKANYDMDVVVANALIDMYAKCGSITDARLVFD----MMNDWNEVSWNAMISGYSMHG 524
             + A  + D  V ++L+DMY KCG +  A  VFD    +  D N  +W+ M++GY  +G
Sbjct: 269 RVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMN-FAWSTMVAGYVQNG 327

Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY 584
              E L +F  M + G   +  T   V +AC+N G++EQG            +  C+E  
Sbjct: 328 REEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQ----------VHGCVEKL 377

Query: 585 ---------TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEI 631
                    +++V +  + G+L+ A  + +      ++ +W ++L +   H    I
Sbjct: 378 WYKLDAPLASAIVDMYAKCGNLEDARSIFDR-ACTKNIAVWTSMLCSYASHGQGRI 432



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 103/415 (24%), Positives = 178/415 (42%), Gaps = 54/415 (13%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK-- 112
           N+   A  ++ C    D+++   +H  +L+ G  LD+   N +L++Y K  +   A +  
Sbjct: 111 NAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVF 170

Query: 113 -----------------------------LFDEMPERNTISFVTTIQGYTVSSQFVEAVG 143
                                        LFDE P R+T S+ T I G   S    +A+ 
Sbjct: 171 GAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALS 230

Query: 144 LFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFS 203
               + + G   N + ++    +   +   +L   +   V     + +AFV ++L+D + 
Sbjct: 231 HLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYC 290

Query: 204 VCGCVEFARKVFDG-------------------LFNDCFEEALNFFSQMRAVGFKPNNFT 244
            CG +E A  VFD                    + N   EEAL+ F +M   G   + FT
Sbjct: 291 KCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFT 350

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
              V  AC  +  +   +  HGC  K  Y++D  +A A++D+Y K G + +AR IF+   
Sbjct: 351 LTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRAC 410

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN- 363
            K++  W+ M+  YA       A+ELF RM    + PN+ T V VL AC+ +  +  G  
Sbjct: 411 TKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGEL 470

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNH--VTWNTMI 416
               +    G++  +   N ++D+Y + G ++ +   F E    NH  + W T++
Sbjct: 471 YFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKN-FIEENNINHEAIVWKTLL 524


>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
           [Vitis vinifera]
          Length = 707

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 227/594 (38%), Positives = 342/594 (57%), Gaps = 14/594 (2%)

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           EA++ +  M+ +G   NNFT+ FVLK C         +  HG  ++T +  DL+V  AL+
Sbjct: 115 EAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALV 174

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
           D+Y K GEI +A  +F+ M  +DV+ W+ MI  Y Q +  + A+ LF +M++     ++ 
Sbjct: 175 DMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEI 234

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           T +SV  A   +    +   +H   V  G + DV V N+++ +YAKCG +E +  +F   
Sbjct: 235 TAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRM 294

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
            +RN ++WN+M+ GY Q G    A+ +F++M   +     VT   ++ AC+ L +   G 
Sbjct: 295 EERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGR 354

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFD--MMNDWNEVSWNAMISGYSM 522
           ++H   + +  D+D  + NA++DMY KCG +  A  +F+   + + +  SWN +ISGY +
Sbjct: 355 KLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGV 414

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
           HG   E L++F  MQ  G  PN++TF  +LSACS+ GL+++G   F  M     + P ++
Sbjct: 415 HGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMT-KLSVRPEMK 473

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDF 642
           HY  MV +LGRAG L++A +LI+ IP +PS  +W ALL AC IH N E+G ++A ++   
Sbjct: 474 HYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQL 533

Query: 643 EPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTS 691
           EPE    +VL+SNIYA +  W+           +   K    S IE    VH F   D S
Sbjct: 534 EPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQS 593

Query: 692 HADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMP 751
                 +   +E L ++ +  GY+PDLS VL DV  ++KE  L  HSEKLA+AF + KM 
Sbjct: 594 SPYYREVYRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMD 653

Query: 752 PSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
              PI++ KNLR+C DCH A K IS I  R+II+RD +RFHHFQ G CSCGD+W
Sbjct: 654 QGMPIQVTKNLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQGGRCSCGDYW 707



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 135/438 (30%), Positives = 217/438 (49%), Gaps = 23/438 (5%)

Query: 225 EALNFFSQMRAVGFKPN-NFTFAFVLKACLGLDTIRVAKSA---HGCALKTCYEMDLYVA 280
            AL+  S    V   P+ +  +  +L+ C  L T+++  S+    G  L T + +     
Sbjct: 7   RALHHLSHTHKVLALPSLHHFYDHLLQCCTSLTTLKLIHSSLSTRGFLLHTPHFL----- 61

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVI----PWSF----MIARYAQTDLSIDAVELFC 332
             L+ LY+K G++ +AR +F+            P SF    M+  YA    S +A++L+ 
Sbjct: 62  ARLIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYI 121

Query: 333 RMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCG 392
            M++  V  N FT+  VL+ CA+  G   G  +H  VVR G  SD+FV  AL+D+YAKCG
Sbjct: 122 YMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCG 181

Query: 393 RMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLR 452
            + ++ E+F     R+ V W  MI  Y Q     KA+++F KM EE     E+T  SV  
Sbjct: 182 EIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVAS 241

Query: 453 ACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS 512
           A   L      + VH   V   +  DV V N+++ MYAKCG++  ARLVFD M + N +S
Sbjct: 242 AVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGIS 301

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
           WN+M+SGY+ +G   + L +F+ MQ     PN +T + ++SACS  G    G      ++
Sbjct: 302 WNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVI 361

Query: 573 AN-YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF-QPSVMIWRALLGACIIHNNVE 630
           ++   I+  +    +++ +  + G LD A ++       +  V  W  L+    +H + +
Sbjct: 362 SSKMDIDTTLR--NAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGK 419

Query: 631 --IGRLSAQHILDFEPED 646
             +   S   +   EP D
Sbjct: 420 EALELFSRMQVEGVEPND 437



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 140/497 (28%), Positives = 239/497 (48%), Gaps = 33/497 (6%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDL--FATNVLLNVYVKLNRLPDATKLF 114
           H Y   LQ C     L T   IH  +  +G  L    F   +++ +Y KL  L  A  LF
Sbjct: 26  HFYDHLLQCCTS---LTTLKLIHSSLSTRGFLLHTPHFLARLII-LYSKLGDLHSARTLF 81

Query: 115 DEMPER--------NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV 166
           D             N+    T ++ Y  + +  EA+ L+  + R G  +N F +   LKV
Sbjct: 82  DHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKV 141

Query: 167 LVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG-LFNDC--- 222
             S   A     V   V + G  S+ FV  AL+D ++ CG +  A +VFD  L  D    
Sbjct: 142 CASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCW 201

Query: 223 ------FEE------ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALK 270
                 +E+      AL  F +M+  GF  +  T   V  A   L   R+A S HG A+ 
Sbjct: 202 TAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVL 261

Query: 271 TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVEL 330
             +  D+ V  +++ +Y K G +  AR +F+ M +++ I W+ M++ Y Q     DA+ L
Sbjct: 262 NGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSL 321

Query: 331 FCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAK 390
           F +M+ +   PN  T + ++ AC+ +    LG ++H+ V+   +  D  + NA+MD+Y K
Sbjct: 322 FNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMK 381

Query: 391 CGRMENSVELF--AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYS 448
           CG ++ +VE+F   E  +R+  +WN +I GY   G   +A+ +FS+M  E V   ++T++
Sbjct: 382 CGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFT 441

Query: 449 SVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMND 507
           S+L AC+    ++ G +      K +   ++     ++DM  + G + +A RL+  + + 
Sbjct: 442 SILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSR 501

Query: 508 WNEVSWNAMISGYSMHG 524
            ++  W A++    +HG
Sbjct: 502 PSDEVWGALLLACRIHG 518



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/395 (24%), Positives = 182/395 (46%), Gaps = 24/395 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N+ +Y   L+ C           +H QV++ G   DLF    L+++Y K   + DA ++F
Sbjct: 131 NNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVF 190

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D M  R+ + +   I  Y  + + ++A+ LF  +  EG   +     +    +  +G   
Sbjct: 191 DRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGR 250

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
           +   V       G   +  VG +++  ++ CG VE AR VFD +                
Sbjct: 251 MAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYT 310

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            N    +AL+ F+QM+A    PN  T   ++ AC  L +  + +  H   + +  ++D  
Sbjct: 311 QNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTT 370

Query: 279 VAVALLDLYTKSGEISNARRIFE--EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           +  A++D+Y K G++  A  +F   E+ ++DV  W+ +I+ Y       +A+ELF RM+ 
Sbjct: 371 LRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQV 430

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             V PN  TF S+L AC+    +D G +  + + ++ +  ++     ++D+  + G +  
Sbjct: 431 EGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNE 490

Query: 397 SVELFAESPKR-NHVTWNTMIV-----GYVQLGEV 425
           +  L  + P R +   W  +++     G  +LGE+
Sbjct: 491 AFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEI 525


>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g68930
 gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
 gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 258/795 (32%), Positives = 393/795 (49%), Gaps = 99/795 (12%)

Query: 56  SHSYATSLQSCI----QNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           S+ Y+  ++ CI    +N      M IH  +++     + F  N +++ Y  +     A 
Sbjct: 3   SNYYSVQIKQCIGLGARNQSRYVKM-IHGNIIRALPYPETFLYNNIVHAYALMKSSTYAR 61

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
           ++FD +P+ N  S+   +  Y+ +    E    F  L                       
Sbjct: 62  RVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLP---------------------- 99

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFS 231
                            D +      LI+ +S+ G V  A K ++ +  D       F +
Sbjct: 100 -----------------DRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRD-------FSA 135

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
            +  V       T   +LK       + + K  HG  +K  +E  L V   LL +Y   G
Sbjct: 136 NLTRV-------TLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVG 188

Query: 292 EISNARRIFEEMP------------------------------KKDVIPWSFMIARYAQT 321
            IS+A+++F  +                               +KD + W+ MI   AQ 
Sbjct: 189 CISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQN 248

Query: 322 DLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVS 381
            L+ +A+E F  M+   +  +Q+ F SVL AC  +  ++ G QIH+ ++R      ++V 
Sbjct: 249 GLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVG 308

Query: 382 NALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVP 441
           +AL+D+Y KC  +  +  +F    ++N V+W  M+VGY Q G   +A+ +F  M    + 
Sbjct: 309 SALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID 368

Query: 442 ATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLV 501
               T    + ACA++++LE G Q H   + +     V V+N+L+ +Y KCG I D+  +
Sbjct: 369 PDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRL 428

Query: 502 FDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLL 561
           F+ MN  + VSW AM+S Y+  G + E +++FD M Q G +P+ +T  GV+SACS  GL+
Sbjct: 429 FNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLV 488

Query: 562 EQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLG 621
           E+G+ YFK M + YGI P I HY+ M+ L  R+G L++A + I G+PF P  + W  LL 
Sbjct: 489 EKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548

Query: 622 ACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKE 670
           AC    N+EIG+ +A+ +++ +P   A + LLS+IYA    W           EK   KE
Sbjct: 549 ACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKE 608

Query: 671 PGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEK 730
           PG SWI+ +G +H F A D S   ++ I   LE LN K    GY PD S V  DV E  K
Sbjct: 609 PGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVK 668

Query: 731 ERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHR 790
            + L  HSE+LA+AF L  +P   PIR+ KNLR+CVDCH A K IS +  REI++RD  R
Sbjct: 669 VKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVR 728

Query: 791 FHHFQDGCCSCGDFW 805
           FH F+DG CSCGDFW
Sbjct: 729 FHRFKDGTCSCGDFW 743



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 58/287 (20%), Positives = 117/287 (40%), Gaps = 28/287 (9%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           + + + + + L +C     +     IH  +++      ++  + L+++Y K   L  A  
Sbjct: 267 KMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKT 326

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +FD M ++N +S+   + GY  + +  EAV +F  + R G + + +     +    ++  
Sbjct: 327 VFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSS 386

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-FNDCFE------- 224
            E            G      V  +L+  +  CG ++ + ++F+ +   D          
Sbjct: 387 LEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSA 446

Query: 225 --------EALNFFSQMRAVGFKPNNFTFAFVLKAC--LGLDTIRVAKSAHGCALKTCYE 274
                   E +  F +M   G KP+  T   V+ AC   GL    V K      L T  E
Sbjct: 447 YAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGL----VEKGQRYFKLMTS-E 501

Query: 275 MDLYVAVA----LLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
             +  ++     ++DL+++SG +  A R    MP   D I W+ +++
Sbjct: 502 YGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548


>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
 gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
          Length = 793

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/790 (33%), Positives = 413/790 (52%), Gaps = 72/790 (9%)

Query: 61  TSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLN--RLPDATKLFDEMP 118
           T LQ C    +++    I  Q++  G   D FA + LL    +L    +  + ++F  + 
Sbjct: 31  THLQKC---QNIKQFNQILSQMILSGFFKDSFAASRLLKFSTELPFININQSYQIFSHIE 87

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAEL-CP 177
             N     T ++GY   +   +A+ ++  +       + + +    +   S+  AE    
Sbjct: 88  NPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQS-CSIRLAEFDGK 146

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVG 237
           C+   V K+G DS+ ++   LI+ ++VCG +  ARKVFDG         L+  S      
Sbjct: 147 CIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDG------SSVLDMVSW----- 195

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR 297
              N+    +VL     +  +  AK  +        E ++  + +++ L+ K G +  A 
Sbjct: 196 ---NSMLAGYVL-----VGNVEEAKDVY----DRMPERNVIASNSMIVLFGKKGNVEEAC 243

Query: 298 RIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATME 357
           ++F EM +KD++ WS +I+ Y Q ++  +A+ LF  M    +  ++   +SVL AC+ + 
Sbjct: 244 KLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLL 303

Query: 358 GLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIV 417
            +  G  +H LVV+VG+ + V + NAL+ +Y+ C  +  + +LF+ES   + ++WN+MI 
Sbjct: 304 VVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMIS 363

Query: 418 GYVQLGEVGKA-------------------------------MIMFSKMLEEQVPATEVT 446
           GYV+ GE+ KA                               +++F +M  E     E  
Sbjct: 364 GYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETI 423

Query: 447 YSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN 506
             SV+ AC  LAAL+ G  +H    K    +++++   LI+MY K G + DA  VF  + 
Sbjct: 424 LVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLE 483

Query: 507 DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEA 566
           +    +WNA+I G +M+GL  + LK F  M++ G  PN +TFV VL AC + GL+++G  
Sbjct: 484 EKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHR 543

Query: 567 YFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH 626
           +F SM+  + I P I+HY  MV LLGRAG L +A +LIE +P  P V  W ALLGAC  +
Sbjct: 544 HFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKY 603

Query: 627 NNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSW 675
            + E G    + +++  P+ +  +VLLSNIYA   +W           +    K PG S 
Sbjct: 604 GDNETGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGCSM 663

Query: 676 IENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLW 735
           IE  G VH F AGD +H     I  ML+ +  K +  GY PD   V  D+ E+EKE  L+
Sbjct: 664 IEAHGRVHEFLAGDKTHPQNEHIEHMLDEMAKKLKLEGYAPDTREVSLDIDEEEKETTLF 723

Query: 736 VHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQ 795
            HSEKLA+AF L  + P +PIRI+KNLRIC DCHTA K+ISK   REI++RD HRFHHF+
Sbjct: 724 RHSEKLAIAFGLIAIDPPTPIRIVKNLRICNDCHTAAKLISKAFNREIVVRDRHRFHHFK 783

Query: 796 DGCCSCGDFW 805
            G CSC D+W
Sbjct: 784 QGSCSCMDYW 793



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 128/503 (25%), Positives = 220/503 (43%), Gaps = 56/503 (11%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           ++++Y    QSC           I   VLK G   D++  N L+N+Y     L DA K+F
Sbjct: 125 DNYTYPILFQSCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVF 184

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D     + +S+ + + GY +     EA  ++  +     E N  A  + + +    G  E
Sbjct: 185 DGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRM----PERNVIASNSMIVLFGKKGNVE 240

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMR 234
               +F          N      L+   ++  C E          N+ +EEAL  F +M 
Sbjct: 241 EACKLF----------NEMKQKDLVSWSALISCYE---------QNEMYEEALILFKEMN 281

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYT------ 288
           A G   +      VL AC  L  +   K  HG  +K   E  + +  AL+ +Y+      
Sbjct: 282 ANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVV 341

Query: 289 -------------------------KSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDL 323
                                    K GEI  AR +F+ MP KD + WS MI+ YAQ D 
Sbjct: 342 TAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDR 401

Query: 324 SIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNA 383
             + + LF  M+     P++   VSV+ AC  +  LD G  IH+ + + GL  ++ +   
Sbjct: 402 FTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTT 461

Query: 384 LMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPAT 443
           L+++Y K G +E+++E+F    ++   TWN +I+G    G V K++  FS+M E  V   
Sbjct: 462 LINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPN 521

Query: 444 EVTYSSVLRACASLAALEPGMQ-VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVF 502
           E+T+ +VL AC  +  ++ G +  + +  +     ++     ++D+  + G + +A  + 
Sbjct: 522 EITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELI 581

Query: 503 DMMNDWNEVS-WNAMISGYSMHG 524
           + M    +VS W A++     +G
Sbjct: 582 ESMPMAPDVSTWGALLGACKKYG 604


>gi|125577630|gb|EAZ18852.1| hypothetical protein OsJ_34389 [Oryza sativa Japonica Group]
          Length = 587

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 237/587 (40%), Positives = 339/587 (57%), Gaps = 14/587 (2%)

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIR-VAKSAHGCALKTCY-EMDLYVAVALLDLYTKS 290
           M  +G +PN+FTF    KA         +    H  A++  Y  +D +V+ A LD+Y K+
Sbjct: 1   MLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKT 60

Query: 291 GEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVL 350
           G +  AR +F EMP ++V+ W+ ++         ++ +E +  +R+A   PN  +  +  
Sbjct: 61  GRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFF 120

Query: 351 QACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHV 410
            ACA    L LG Q H  VV+ G   DV V N+++D Y KC     +  +F     RN V
Sbjct: 121 NACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSV 180

Query: 411 TWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLT 470
           +W +M+  Y Q G   +A   +          T+   SS L  CA L  L  G  +H + 
Sbjct: 181 SWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVA 240

Query: 471 VKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVL 530
           V++  D ++ VA+AL+DMY KCG + DA  +F      N V+WNAMI GY+  G +   L
Sbjct: 241 VRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNAL 300

Query: 531 KVFDLMQQRG-WRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVS 589
            VFD M + G   PN +T V V+++CS GGL + G   F++M   +GIEP  EHY  +V 
Sbjct: 301 LVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVD 360

Query: 590 LLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEAT 649
           LLGRAG  ++A ++I+G+P +PS+ +W ALLGAC +H   E+GR++A+ + + +P+D   
Sbjct: 361 LLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSGN 420

Query: 650 HVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNII 698
           HVLLSN++A A  W +A             K+PG SW+  + +VH FRA DT H   N I
Sbjct: 421 HVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEI 480

Query: 699 RGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRI 758
           + +L  L  + + AGY+PD    L D+ E+EKE  ++ HSEKLALAF L  +PP  PIRI
Sbjct: 481 QALLSKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLICIPPGVPIRI 540

Query: 759 IKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +KNLRICVDCH A K IS IV REII+RD +RFHHF+   CSCGD+W
Sbjct: 541 MKNLRICVDCHRAFKFISGIVGREIIVRDNNRFHHFKQYQCSCGDYW 587



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 198/417 (47%), Gaps = 31/417 (7%)

Query: 150 REGHELNPFAFTAFLKVLVSMG-WAELCPCVFACVYKLGH-DSNAFVGTALIDAFSVCGC 207
           R G   N F F +  K   S    + + P + +   + G+   + FV  A +D +   G 
Sbjct: 3   RLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGR 62

Query: 208 VEFARKVFDGLFNDCFE----------------EALNFFSQMRAVGFKPNNFTFAFVLKA 251
           ++ AR +F  + N                    E +  +  +R  G  PN  +      A
Sbjct: 63  LKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNA 122

Query: 252 CLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPW 311
           C G   + + +  HG  +K  +EMD+ V  +++D Y K      AR +F+ M  ++ + W
Sbjct: 123 CAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSW 182

Query: 312 SFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR 371
             M+A YAQ     +A   +   R++   P  F   S L  CA + GL LG  +H++ VR
Sbjct: 183 CSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVR 242

Query: 372 VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIM 431
             + +++FV++AL+D+Y KCG +E++ ++F E+P+RN VTWN MI GY  +G+   A+++
Sbjct: 243 SCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLV 302

Query: 432 FSKMLEE-QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDM 488
           F  M+   +     +T  +V+ +C+     + G ++   T++  + ++    +   ++D+
Sbjct: 303 FDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELF-ETMRERFGIEPRTEHYACVVDL 361

Query: 489 YAKCGSITDARLVFDMMNDWNEVS-WNAMISGYSMHG------LSAEVLKVFDLMQQ 538
             + G    A  V   M     +S W A++    MHG      ++AE  K+F+L  Q
Sbjct: 362 LGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAE--KLFELDPQ 416



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/371 (25%), Positives = 168/371 (45%), Gaps = 25/371 (6%)

Query: 89  LDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTL 148
           +D F +   L++Y K  RL  A  LF EMP RN +++   +    +  + +E +  +  L
Sbjct: 45  VDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGL 104

Query: 149 HREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCV 208
              G   N  +  AF        +  L       V K G + +  V  +++D +  C C 
Sbjct: 105 REAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCA 164

Query: 209 EFARKVFDGLF----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKAC 252
             AR VFDG+                 N   EEA   +   R  G +P +F  +  L  C
Sbjct: 165 GKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTC 224

Query: 253 LGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWS 312
            GL  + + ++ H  A+++C + +++VA AL+D+Y K G + +A +IF E P+++++ W+
Sbjct: 225 AGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWN 284

Query: 313 FMIARYAQTDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQACA----TMEGLDLGNQIHS 367
            MI  YA    + +A+ +F  M R    APN  T V+V+ +C+    T +G +L     +
Sbjct: 285 AMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYEL---FET 341

Query: 368 LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT-WNTMIVGYVQLGEVG 426
           +  R G+         ++D+  + G  E + E+    P R  ++ W  ++      G+  
Sbjct: 342 MRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTE 401

Query: 427 KAMIMFSKMLE 437
              I   K+ E
Sbjct: 402 LGRIAAEKLFE 412



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 113/289 (39%), Gaps = 35/289 (12%)

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
           L      H  V+K G  +D+   N +++ Y K      A  +FD M  RN++S+ + +  
Sbjct: 129 LSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAA 188

Query: 132 YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSN 191
           Y  +    EA   +    R G E   F  ++ L     +    L   + A   +   D+N
Sbjct: 189 YAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDAN 248

Query: 192 AFVGTALIDAFSVCGCVEFARKVF-----------------DGLFNDCFEEALNFFSQMR 234
            FV +AL+D +  CGCVE A ++F                      D     L F   +R
Sbjct: 249 IFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIR 308

Query: 235 AVGFKPNNFTFAFVLKACL-------GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLY 287
           +    PN  T   V+ +C        G +     +   G   +T    + Y  V  +DL 
Sbjct: 309 SGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRT----EHYACV--VDLL 362

Query: 288 TKSGEISNARRIFEEMPKKDVIP-WSFMIAR---YAQTDLS-IDAVELF 331
            ++G    A  + + MP +  I  W  ++     + +T+L  I A +LF
Sbjct: 363 GRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLF 411



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 12/113 (10%)

Query: 42  STTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLD--LFATNVLLN 99
           S   P  F VS        ++L +C     L     +H   ++  +C+D  +F  + L++
Sbjct: 208 SGEEPTDFMVS--------SALTTCAGLLGLHLGRALHAVAVR--SCIDANIFVASALVD 257

Query: 100 VYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREG 152
           +Y K   + DA ++F E P+RN +++   I GY        A+ +F  + R G
Sbjct: 258 MYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSG 310


>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g29760, chloroplastic; Flags: Precursor
 gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 738

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 240/666 (36%), Positives = 367/666 (55%), Gaps = 61/666 (9%)

Query: 201 AFSVCGCVEFARKVFDGLFN-----------------DCFEEALNFFSQMRAVGFKPNNF 243
           A S    +E+ARKVFD +                   D       F   +      PN +
Sbjct: 73  ALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKY 132

Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
           TF F++KA   + ++ + +S HG A+K+    D++VA +L+  Y   G++ +A ++F  +
Sbjct: 133 TFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTI 192

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
            +KDV+ W+ MI  + Q      A+ELF +M    V  +  T V VL ACA +  L+ G 
Sbjct: 193 KEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGR 252

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYV--- 420
           Q+ S +    +  ++ ++NA++D+Y KCG +E++  LF    ++++VTW TM+ GY    
Sbjct: 253 QVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISE 312

Query: 421 ----------------------------QLGEVGKAMIMFSKM-LEEQVPATEVTYSSVL 451
                                       Q G+  +A+I+F ++ L++ +   ++T  S L
Sbjct: 313 DYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTL 372

Query: 452 RACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEV 511
            ACA + ALE G  +H    K    M+  V +ALI MY+KCG +  +R VF+ +   +  
Sbjct: 373 SACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVF 432

Query: 512 SWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSM 571
            W+AMI G +MHG   E + +F  MQ+   +PN +TF  V  ACS+ GL+++ E+ F  M
Sbjct: 433 VWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQM 492

Query: 572 VANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEI 631
            +NYGI P  +HY  +V +LGR+G+L+KA K IE +P  PS  +W ALLGAC IH N+ +
Sbjct: 493 ESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNL 552

Query: 632 GRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQG 680
             ++   +L+ EP ++  HVLLSNIYA    WE  +            KEPG S IE  G
Sbjct: 553 AEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDG 612

Query: 681 MVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDE-KERYLWVHSE 739
           M+H F +GD +H     + G L  +  K +  GY P++S VL+ + E+E KE+ L +HSE
Sbjct: 613 MIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSE 672

Query: 740 KLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCC 799
           KLA+ + L        IR+IKNLR+C DCH+  K+IS++  REII+RD +RFHHF++G C
Sbjct: 673 KLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQC 732

Query: 800 SCGDFW 805
           SC DFW
Sbjct: 733 SCNDFW 738



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 125/405 (30%), Positives = 211/405 (52%), Gaps = 37/405 (9%)

Query: 257 TIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKS--GEISNARRIFEEMPKKDVIPWSFM 314
           ++R  K  HG  ++T    D Y A  L  +   S    +  AR++F+E+PK +   W+ +
Sbjct: 42  SLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTL 101

Query: 315 IARYAQTDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
           I  YA     + ++  F  M  ++   PN++TF  +++A A +  L LG  +H + V+  
Sbjct: 102 IRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSA 161

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
           + SDVFV+N+L+  Y  CG ++++ ++F    +++ V+WN+MI G+VQ G   KA+ +F 
Sbjct: 162 VGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFK 221

Query: 434 KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCG 493
           KM  E V A+ VT   VL ACA +  LE G QV     +   ++++ +ANA++DMY KCG
Sbjct: 222 KMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCG 281

Query: 494 SITDARLVFDMMNDWNEVS-------------------------------WNAMISGYSM 522
           SI DA+ +FD M + + V+                               WNA+IS Y  
Sbjct: 282 SIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQ 341

Query: 523 HGLSAEVLKVFDLMQ-QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
           +G   E L VF  +Q Q+  + N +T V  LSAC+  G LE G  +  S +  +GI    
Sbjct: 342 NGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGR-WIHSYIKKHGIRMNF 400

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH 626
              ++++ +  + G L+K+ ++   +  +  V +W A++G   +H
Sbjct: 401 HVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMH 444



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 201/444 (45%), Gaps = 54/444 (12%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVL--LNVYVKLNRLPDATKLFDEMPER 120
           ++ C+    L+     H  +++ G   D ++ + L  +        L  A K+FDE+P+ 
Sbjct: 37  IERCV---SLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKP 93

Query: 121 NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGH-ELNPFAFTAFLKVLVSMGWAELCPCV 179
           N+ ++ T I+ Y      V ++  F  +  E     N + F   +K    +    L   +
Sbjct: 94  NSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSL 153

Query: 180 FACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF-----------DGLFNDCFE---- 224
                K    S+ FV  +LI  +  CG ++ A KVF           + + N   +    
Sbjct: 154 HGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSP 213

Query: 225 -EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
            +AL  F +M +   K ++ T   VL AC  +  +   +       +    ++L +A A+
Sbjct: 214 DKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAM 273

Query: 284 LDLYTKSGEISNARRIFE-------------------------------EMPKKDVIPWS 312
           LD+YTK G I +A+R+F+                                MP+KD++ W+
Sbjct: 274 LDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWN 333

Query: 313 FMIARYAQTDLSIDAVELFCRMR-QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR 371
            +I+ Y Q     +A+ +F  ++ Q  +  NQ T VS L ACA +  L+LG  IHS + +
Sbjct: 334 ALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK 393

Query: 372 VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIM 431
            G+  +  V++AL+ +Y+KCG +E S E+F    KR+   W+ MI G    G   +A+ M
Sbjct: 394 HGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDM 453

Query: 432 FSKMLEEQVPATEVTYSSVLRACA 455
           F KM E  V    VT+++V  AC+
Sbjct: 454 FYKMQEANVKPNGVTFTNVFCACS 477



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 159/323 (49%), Gaps = 25/323 (7%)

Query: 338 FVAPNQFT-------FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNAL--MDVY 388
           F  PNQ T        +S+++ C ++  L    Q H  ++R G  SD + ++ L  M   
Sbjct: 18  FSNPNQPTTNNERSRHISLIERCVSLRQL---KQTHGHMIRTGTFSDPYSASKLFAMAAL 74

Query: 389 AKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE-QVPATEVTY 447
           +    +E + ++F E PK N   WNT+I  Y    +   ++  F  M+ E Q    + T+
Sbjct: 75  SSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTF 134

Query: 448 SSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND 507
             +++A A +++L  G  +H + VK+    DV VAN+LI  Y  CG +  A  VF  + +
Sbjct: 135 PFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKE 194

Query: 508 WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE-- 565
            + VSWN+MI+G+   G   + L++F  M+    + +++T VGVLSAC+    LE G   
Sbjct: 195 KDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQV 254

Query: 566 -AYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACI 624
            +Y +    N  +        +M+ +  + G ++ A +L + +  + +V  W  +L    
Sbjct: 255 CSYIEENRVNVNLTLA----NAMLDMYTKCGSIEDAKRLFDAMEEKDNV-TWTTMLDGYA 309

Query: 625 IHNNVEIGRLSAQHILDFEPEDE 647
           I  + E    +A+ +L+  P+ +
Sbjct: 310 ISEDYE----AAREVLNSMPQKD 328



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 87/400 (21%), Positives = 167/400 (41%), Gaps = 49/400 (12%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N +++   +++  +   L    ++H   +K     D+F  N L++ Y     L  A K+F
Sbjct: 130 NKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVF 189

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             + E++ +S+ + I G+       +A+ LF  +  E  + +       L     +   E
Sbjct: 190 TTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLE 249

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------- 218
               V + + +   + N  +  A++D ++ CG +E A+++FD +                
Sbjct: 250 FGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYA 309

Query: 219 FNDCFE---EALNFFSQMRAVGF-----------KP------------------NNFTFA 246
            ++ +E   E LN   Q   V +           KP                  N  T  
Sbjct: 310 ISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLV 369

Query: 247 FVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK 306
             L AC  +  + + +  H    K    M+ +V  AL+ +Y+K G++  +R +F  + K+
Sbjct: 370 STLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKR 429

Query: 307 DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI- 365
           DV  WS MI   A      +AV++F +M++A V PN  TF +V  AC+    +D    + 
Sbjct: 430 DVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLF 489

Query: 366 HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           H +    G++ +      ++DV  + G +E +V+     P
Sbjct: 490 HQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMP 529



 Score = 40.8 bits (94), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 25/109 (22%), Positives = 50/109 (45%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           + N  +  ++L +C Q   L+    IH  + K G  ++   T+ L+++Y K   L  + +
Sbjct: 362 KLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSRE 421

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFT 161
           +F+ + +R+   +   I G  +     EAV +F  +     + N   FT
Sbjct: 422 VFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFT 470


>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1736

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 263/735 (35%), Positives = 407/735 (55%), Gaps = 38/735 (5%)

Query: 81   QVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVE 140
            +V K G   DL+ ++ L++ + +     DA  +F++M  RN +S    + G     Q   
Sbjct: 307  RVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEA 366

Query: 141  AVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE----LCPCVFACVYKLG-HDSNAFVG 195
            A  +F  + ++   +N  ++   L         E        V A V + G +D+   +G
Sbjct: 367  AAKVFHEM-KDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIG 425

Query: 196  TALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRAVGFK 239
              L++ ++  G +  A  VF+ +                 N+C E+A   F +MR  G  
Sbjct: 426  NGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSM 485

Query: 240  PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
            P+NFT    L +C  L  I + +  H   LK   + D+ V+ ALL LY ++G  +   ++
Sbjct: 486  PSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKV 545

Query: 300  FEEMPKKDVIPWSFMIARYAQTDLSI-DAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
            F  MP+ D + W+ +I   + ++ S+  AV+ F +M +     ++ TF+++L A +++  
Sbjct: 546  FSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSL 605

Query: 359  LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE-SPKRNHVTWNTMIV 417
             ++ +QIH+LV++  L  D  + NAL+  Y KCG M    ++FA  S  R+ V+WN+MI 
Sbjct: 606  HEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMIS 665

Query: 418  GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM 477
            GY+    + KAM +   M+++       T++++L ACAS+A LE GM+VH   ++A  + 
Sbjct: 666  GYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLES 725

Query: 478  DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQ 537
            DVVV +AL+DMY+KCG I  A   F++M   N  SWN+MISGY+ HG   + LK+F  M 
Sbjct: 726  DVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMM 785

Query: 538  QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHL 597
              G  P+++TFVGVLSACS+ G +E+G  +FKSM   Y + P +EH++ MV LLGRAG L
Sbjct: 786  LDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKL 845

Query: 598  DKAAKLIEGIPFQPSVMIWRALLGACIIHN--NVEIGRLSAQHILDFEPEDEATHVLLSN 655
            D+    I  +P +P+V+IWR +LGAC   N  N E+GR +A+ +L+ EP++   +VLL+N
Sbjct: 846  DEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLAN 905

Query: 656  IYAMARSWEK-----------AASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEW 704
            +YA    WE            A  KE G SW+  +  VH F AGD  H + ++I   L  
Sbjct: 906  MYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLRE 965

Query: 705  LNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRI 764
            LN K R AGYIP     L D+  + KE  L  HSEK+A+AF L +   + PIRI+KNLR+
Sbjct: 966  LNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAFVLTRQ-SALPIRIMKNLRV 1024

Query: 765  CVDCHTAIKIISKIV 779
            C DCH+A   ISKI+
Sbjct: 1025 CGDCHSAFGYISKII 1039



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 168/588 (28%), Positives = 289/588 (49%), Gaps = 34/588 (5%)

Query: 73  QTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGY 132
           + A  +H Q +K G   +LF +N L+N+YV++  L  A KLFDEM  RN +++   I GY
Sbjct: 88  EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 147

Query: 133 TVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA--ELCPCVFACVYKLGHDS 190
           T + +  EA   F  + R G   N +AF + L+     G +  +L   +   + K  + S
Sbjct: 148 TQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGS 207

Query: 191 NAFVGTALIDAFSVC-GCVEFARKVFDGL-------FNDCFE---------EALNFFSQM 233
           +  V   LI  +  C      AR VFDG+       +N              A + FS M
Sbjct: 208 DVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSM 267

Query: 234 RAVG----FKPNNFTF-AFVLKACLGLD-TIRVAKSAHGCALKTCYEMDLYVAVALLDLY 287
           +  G    FKPN +TF + +  AC  +D  + V +       K+ +  DLYV+ AL+  +
Sbjct: 268 QKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGF 327

Query: 288 TKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFV 347
            + G   +A+ IFE+M  ++V+  + ++    +      A ++F  M+   V  N  ++V
Sbjct: 328 ARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKD-LVGINSDSYV 386

Query: 348 SVLQACATM----EGLDLGNQIHSLVVRVGLLSD-VFVSNALMDVYAKCGRMENSVELFA 402
            +L A +      EG   G ++H+ V+R GL  + V + N L+++YAK G + ++  +F 
Sbjct: 387 VLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFE 446

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
              +++ V+WN++I G  Q      A   F +M       +  T  S L +CASL  +  
Sbjct: 447 LMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIML 506

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G Q+HC  +K   D DV V+NAL+ +YA+ G  T+   VF +M ++++VSWN++I   S 
Sbjct: 507 GEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSD 566

Query: 523 HGLS-AEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
              S ++ +K F  M + GW  + +TF+ +LSA S+  L E       ++V  Y +    
Sbjct: 567 SEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQ-IHALVLKYCLSDDT 625

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNV 629
               +++S  G+ G +++  K+   +      + W +++    IHN +
Sbjct: 626 AIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISG-YIHNEL 672



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 62/118 (52%)

Query: 442 ATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLV 501
           ++  T+ S++         E   ++H  ++K  +  ++ ++N LI++Y + G +  A+ +
Sbjct: 69  SSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKL 128

Query: 502 FDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGG 559
           FD M++ N V+W  +ISGY+ +G   E    F  M + G+ PN+  F   L AC   G
Sbjct: 129 FDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 186



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 58/121 (47%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
            +S ++AT L +C     L+  M +H   ++     D+   + L+++Y K  R+  A++ 
Sbjct: 690 LDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRF 749

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           F+ MP RN  S+ + I GY       +A+ LF+ +  +G   +   F   L     +G+ 
Sbjct: 750 FELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFV 809

Query: 174 E 174
           E
Sbjct: 810 E 810


>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 745

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 241/680 (35%), Positives = 373/680 (54%), Gaps = 49/680 (7%)

Query: 155 LNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKV 214
           L+ F   + LK        +L   +     K G  S+ FV  AL++ +  CGC+  AR V
Sbjct: 86  LDNFILPSLLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLV 145

Query: 215 FDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTI 258
           FD +                 +  F EAL    +M+ VG K +      ++     L  +
Sbjct: 146 FDQMPERDVVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLDM 205

Query: 259 RVAKSAHGCALKTCYE--MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIA 316
           +  ++ HG  ++   +  M++ +  AL+D+Y K G +++A+R+F+ + K+ V+ W+ MIA
Sbjct: 206 KSGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIA 265

Query: 317 RYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLS 376
              ++    +  + F RM +  + PN+ T +S++  C  +  LDLG   H+ ++R G   
Sbjct: 266 GCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGM 325

Query: 377 DVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML 436
            + +  AL+D+Y KCG++  +  LF    K++   W+ +I  Y  +  + +   +F +ML
Sbjct: 326 SLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEML 385

Query: 437 EEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSIT 496
              V    VT  S+L  CA   AL+ G   H    +   ++DV++  ALI+MYAKCG +T
Sbjct: 386 NNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVT 445

Query: 497 DARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS 556
            AR +F+     +   WN M++G+SMHG   E L++F  M+  G  PN++TFV +  ACS
Sbjct: 446 IARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACS 505

Query: 557 NGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIW 616
           + GL+                    EHY  +V LLGRAGHLD+A  +IE +P +P+ +IW
Sbjct: 506 HSGLM--------------------EHYGCLVDLLGRAGHLDEAHNIIENMPMRPNTIIW 545

Query: 617 RALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-------- 668
            ALL AC +H N+ +G ++A+ IL+ +P++    VL SNIYA A+ W    S        
Sbjct: 546 GALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWNDVTSVREAMSHS 605

Query: 669 ---KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDV 725
              KEPGLSWIE  G VH+F++GD +      +  M+  + +K R++GY P+ +AVL ++
Sbjct: 606 GMKKEPGLSWIEVSGSVHHFKSGDKACTQTTKVYEMVTEMCIKLRESGYTPNTAAVLLNI 665

Query: 726 REDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIII 785
            E+EKE  L  HSEKLA AF L    P +PIRI+KNLRIC DCH A K++SKI  R II+
Sbjct: 666 DEEEKESALSYHSEKLATAFGLISTAPGTPIRIVKNLRICDDCHAATKLLSKIYGRTIIV 725

Query: 786 RDVHRFHHFQDGCCSCGDFW 805
           RD +RFHHF +G CSC  +W
Sbjct: 726 RDRNRFHHFSEGYCSCMGYW 745



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 138/480 (28%), Positives = 222/480 (46%), Gaps = 38/480 (7%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L++C Q         +H    K G   D+F  N L+N+Y K   L  A  +FD+MPER+ 
Sbjct: 95  LKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDV 154

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +S+ T +  Y  S  F EA+ L   +   G +L+  A  + + V  ++   +    V   
Sbjct: 155 VSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGY 214

Query: 183 VYKLGHDSNAFVG--TALIDAFSVCGCVEFARKVFD---------------GLFNDC-FE 224
           + +   D    V   TALID +   GC+  A+++FD               G    C  +
Sbjct: 215 IVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLD 274

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           E    F++M      PN  T   ++  C  + T+ + K  H   L+  + M L +  AL+
Sbjct: 275 EGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALI 334

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
           D+Y K G++  AR +F  + KKDV  WS +I+ YA          LF  M    V PN  
Sbjct: 335 DMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNV 394

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           T VS+L  CA    LDLG   H+ + R GL  DV +  AL+++YAKCG +  +  LF E+
Sbjct: 395 TMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEA 454

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
            +R+   WNTM+ G+   G   +A+ +FS+M    V   ++T+ S+  AC+       G+
Sbjct: 455 MQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACS-----HSGL 509

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR-LVFDMMNDWNEVSWNAMISGYSMH 523
             H                 L+D+  + G + +A  ++ +M    N + W A+++   +H
Sbjct: 510 MEH--------------YGCLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLH 555



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 160/315 (50%), Gaps = 5/315 (1%)

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAP-NQFTFVSVLQACATMEGLDLGNQIHSLV 369
           ++ +I+ Y    L   +   +  MR    A  + F   S+L+ACA     DLG ++H   
Sbjct: 55  YNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGFA 114

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAM 429
            + G  SDVFV NALM++Y KCG + ++  +F + P+R+ V+W TM+  YV+    G+A+
Sbjct: 115 QKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEAL 174

Query: 430 IMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK--ANYDMDVVVANALID 487
            +  +M    V  + V   S++    +L  ++ G  VH   V+   +  M+V +  ALID
Sbjct: 175 RLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALID 234

Query: 488 MYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLT 547
           MY K G +  A+ +FD ++  + VSW  MI+G        E  K F+ M +    PN +T
Sbjct: 235 MYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEIT 294

Query: 548 FVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGI 607
            + +++ C   G L+ G+ +F + +   G    +   T+++ + G+ G +  A  L  G+
Sbjct: 295 LLSLITECGFVGTLDLGK-WFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGV 353

Query: 608 PFQPSVMIWRALLGA 622
             +  V IW  L+ A
Sbjct: 354 K-KKDVKIWSVLISA 367



 Score = 47.0 bits (110), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 57/134 (42%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N+ +  + L  C +   L      H  + + G  +D+     L+N+Y K   +  A  LF
Sbjct: 392 NNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLF 451

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           +E  +R+   + T + G+++     EA+ LFS +   G E N   F +        G  E
Sbjct: 452 NEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSHSGLME 511

Query: 175 LCPCVFACVYKLGH 188
              C+   + + GH
Sbjct: 512 HYGCLVDLLGRAGH 525


>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
          Length = 583

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 216/572 (37%), Positives = 347/572 (60%), Gaps = 12/572 (2%)

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
           +   + AC+    +   +  H   +   Y   +++   L+ +Y + G + +AR + + MP
Sbjct: 13  YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
           ++ V+ W+ MI+ Y+QT+  ++A++LF +M +A   PN++T  +VL +C+  + +  G Q
Sbjct: 73  ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 132

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
           +HSL+V+    S +FV ++L+D+YAK   ++ +  +F   P+R+ V+   +I GY Q G 
Sbjct: 133 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGL 192

Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA 484
             +A+ +F ++  E +    VT+++++ A + LA+L+ G QVH L ++      V + N+
Sbjct: 193 DEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNS 252

Query: 485 LIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPN 544
           LIDMY+KCG +  +R VFD M + + VSWNAM+ GY  HGL  EV+ +F  + +   +P+
Sbjct: 253 LIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPD 311

Query: 545 NLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLI 604
           ++T + VLS CS+GGL+++G   F ++V          HY  ++ LLGR+G L+KA  LI
Sbjct: 312 SVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLI 371

Query: 605 EGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW- 663
           E +PF+ +  IW +LLGAC +H NV +G L AQ +L+ EPE+   +V+LSNIYA A  W 
Sbjct: 372 ENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWK 431

Query: 664 ----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAG 713
                     EK  +KEPG SWI    ++H F + +  H     I   ++ + +  + AG
Sbjct: 432 DVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAG 491

Query: 714 YIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIK 773
           ++PDLS VL DV +++KER L  HSEKLA+ F L   PP   IR++KNLRICVDCH   K
Sbjct: 492 FVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDCHNFAK 551

Query: 774 IISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            +SK+ +REI +RD +RFH    G C+CGD+W
Sbjct: 552 FVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 583



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 182/349 (52%), Gaps = 19/349 (5%)

Query: 193 FVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAV 236
           F+GT L+  +  CG ++ AR V D +                  +   EAL+ F +M   
Sbjct: 46  FLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRA 105

Query: 237 GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNA 296
           G  PN +T A VL +C G  +I   K  H   +KT +E  ++V  +LLD+Y KS  I  A
Sbjct: 106 GCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEA 165

Query: 297 RRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM 356
           RR+F+ +P++DV+  + +I+ YAQ  L  +A++LF ++    +  N  TF +++ A + +
Sbjct: 166 RRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGL 225

Query: 357 EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMI 416
             LD G Q+H+L++R  L   V + N+L+D+Y+KCG++  S  +F    +R+ V+WN M+
Sbjct: 226 ASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAML 285

Query: 417 VGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD 476
           +GY + G +G  +I   K L ++V    VT  +VL  C+    ++ G+ +    VK    
Sbjct: 286 MGYGRHG-LGHEVISLFKDLHKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSA 344

Query: 477 -MDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
            +       +ID+  + G +  A  L+ +M  +     W +++    +H
Sbjct: 345 LLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVH 393



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 179/368 (48%), Gaps = 22/368 (5%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
           H Y  ++ +CI+   L     +H +++       +F    L+ +YV+   L DA  + D 
Sbjct: 11  HEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDR 70

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
           MPER+ +S+ T I GY+ + + VEA+ LF  + R G   N +     L            
Sbjct: 71  MPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQG 130

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN----DCF--------- 223
             V + + K   +S+ FVG++L+D ++    ++ AR+VFD L       C          
Sbjct: 131 KQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQK 190

Query: 224 ---EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
              EEAL+ F Q+ + G + N+ TF  ++ A  GL ++   K  H   L+   E+  +VA
Sbjct: 191 GLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRK--ELPFFVA 248

Query: 281 V--ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           +  +L+D+Y+K G++  +RR+F+ M ++ V+ W+ M+  Y +  L  + + LF  + +  
Sbjct: 249 LQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE- 307

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR-VGLLSDVFVSNALMDVYAKCGRMENS 397
           V P+  T ++VL  C+    +D G  I   VV+    L        ++D+  + GR+E +
Sbjct: 308 VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKA 367

Query: 398 VELFAESP 405
           + L    P
Sbjct: 368 LNLIENMP 375



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 111/273 (40%), Gaps = 30/273 (10%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N ++ AT L SC     +     +H  ++K      +F  + LL++Y K   + +A ++F
Sbjct: 110 NEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVF 169

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D +PER+ +S    I GY       EA+ LF  L+ EG + N   FT  +  L  +   +
Sbjct: 170 DTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLD 229

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF----------- 223
               V A + +        +  +LID +S CG + ++R+VFD +                
Sbjct: 230 YGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYG 289

Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKACL-------GLDTIRVAKSAHGCALKT 271
                 E ++ F  +     KP++ T   VL  C        GLD            L T
Sbjct: 290 RHGLGHEVISLFKDLHK-EVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHT 348

Query: 272 CYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
            +         ++DL  +SG +  A  + E MP
Sbjct: 349 GH------YGCIIDLLGRSGRLEKALNLIENMP 375


>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 238/582 (40%), Positives = 337/582 (57%), Gaps = 16/582 (2%)

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC-YEMDLYVAVALLDLYTKSGEISNA 296
             PN  + A ++++ +     R+ ++AH   +KT    +  ++   L+++Y+K    ++A
Sbjct: 4   LSPN--SLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSA 61

Query: 297 RRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM 356
           + +    P + V+ W+ +IA   Q      A+  F  MR+  + PN FTF    +A  ++
Sbjct: 62  QLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSL 121

Query: 357 EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMI 416
               +G Q+H+L V+ G +SDVFV  +  D+Y+K G  E + ++F E P+RN  TWN  +
Sbjct: 122 RSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYL 181

Query: 417 VGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD 476
              V  G    A+  F +  +E +  T+   SSVL ACA L+ LE G  VH L VKA   
Sbjct: 182 SNSVLEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVV 241

Query: 477 MDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLM 536
            ++ V +AL+DMY KCGSI DA   FD M + N V+WNAMI GY+  G +   + +FD M
Sbjct: 242 GNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEM 301

Query: 537 QQRGWR--PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
                R  PN +TFV VLSACS  G +  G   F+SM   YGIEP  EHY  +V LLGRA
Sbjct: 302 TCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRA 361

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLS 654
           G +++A + I+ +P +P+V +W ALLGA  +    E+G+++A ++ + +P D   HVLLS
Sbjct: 362 GMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLS 421

Query: 655 NIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLE 703
           N++A A  WE+A             K  G SWI     VH F+A DTSH   + I+ ML 
Sbjct: 422 NMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLA 481

Query: 704 WLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLR 763
            L  +   AGYIPD S  L D+ E+EK   +W HSEK+ALAF L  +P   PIRI KNLR
Sbjct: 482 KLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRITKNLR 541

Query: 764 ICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           IC DCH+AIK IS IV REII+RD + FH F+D  CSC D+W
Sbjct: 542 ICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQCSCRDYW 583



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 120/397 (30%), Positives = 191/397 (48%), Gaps = 23/397 (5%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKK-GNCLDLFATNVLLNVYVKLNRLPDATK 112
            + +S A+ ++S +     +     H Q++K   N L  F  N L+N+Y KL+R   A  
Sbjct: 4   LSPNSLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQL 63

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           L    P R+ +++   I G   + +F  A+  FS + R+  + N F F    K   S+  
Sbjct: 64  LLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRS 123

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------- 216
             +   V A   K G  S+ FVG +  D +S  G  E ARK+FD                
Sbjct: 124 PLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSN 183

Query: 217 GLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
            +    +++AL  F + R  G +P +F  + VL AC GL  + V KS H  A+K C   +
Sbjct: 184 SVLEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGN 243

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR- 335
           ++V  AL+D+Y K G I +A R F+EMP+++++ W+ MI  YA    +  AV LF  M  
Sbjct: 244 IFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTC 303

Query: 336 -QAFVAPNQFTFVSVLQACATMEGLDLGNQI-HSLVVRVGLLSDVFVSNALMDVYAKCGR 393
               VAPN  TFV VL AC+    +++G +I  S+  R G+         ++D+  + G 
Sbjct: 304 GSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGM 363

Query: 394 MENSVELFAESPKRNHVT-WNTMIVGYVQLG--EVGK 427
           +E + +   + P R  V+ W  ++      G  E+GK
Sbjct: 364 VEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGK 400



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 102/318 (32%), Positives = 167/318 (52%), Gaps = 7/318 (2%)

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           N  F  AL  FS MR    +PN+FTF    KA   L +  V K  H  A+K     D++V
Sbjct: 86  NGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFV 145

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
             +  D+Y+K+G    AR++F+EMP++++  W+  ++         DA+  F   R+  +
Sbjct: 146 GCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEARKEGI 205

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
            P  F   SVL ACA +  L++G  +H+L V+  ++ ++FV +AL+D+Y KCG +E++  
Sbjct: 206 EPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAER 265

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML--EEQVPATEVTYSSVLRACASL 457
            F E P+RN VTWN MI GY   G+   A+ +F +M     +V    VT+  VL AC+  
Sbjct: 266 AFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRA 325

Query: 458 AALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDARLVFDMMNDWNEVS-WN 514
            ++  GM++   +++  Y ++    +   ++D+  + G +  A      M     VS W 
Sbjct: 326 GSVNVGMEIF-ESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWG 384

Query: 515 AMISGYSMHGLSAEVLKV 532
           A++    M G S E+ KV
Sbjct: 385 ALLGASKMFGKS-ELGKV 401



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 9/146 (6%)

Query: 22  NAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQ 81
           N+ L G    A  +  +       P  F VS        + L +C     L+   ++H  
Sbjct: 183 NSVLEGRYDDALTAFIEARKEGIEPTDFMVS--------SVLSACAGLSVLEVGKSVHTL 234

Query: 82  VLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEA 141
            +K     ++F  + L+++Y K   + DA + FDEMPERN +++   I GY    Q   A
Sbjct: 235 AVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMA 294

Query: 142 VGLFSTLHREGHELNPFAFTAFLKVL 167
           V LF  +    H + P  +  F+ VL
Sbjct: 295 VTLFDEMTCGSHRVAP-NYVTFVCVL 319


>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 722

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 241/635 (37%), Positives = 365/635 (57%), Gaps = 49/635 (7%)

Query: 220 NDCFEEALNFFSQMRAVGF-KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
           +D   EA+  +  M A G   PNNFTF F+L +C  L ++      H   +K  +E DL+
Sbjct: 88  SDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFESDLF 147

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V  AL+ LY+  G ++ AR +F+E   +D++ ++ MI  YA+ +    A+ LF  M+ + 
Sbjct: 148 VRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSG 207

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR--VGLLSDVFVSNALMDVYAKCG---- 392
           + P++FTFV++   C+ +   ++G QIH+ V +    + S++ + +A++D+YAKCG    
Sbjct: 208 ILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINI 267

Query: 393 ----------------------------RMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
                                        +  + +LF    +R+ ++W  MI GY Q G+
Sbjct: 268 AERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQ 327

Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV-HCLTVKANYDMDVVVAN 483
             +A+ +F +M    +   EVT  +VL ACA L A + G ++ H       ++ + ++  
Sbjct: 328 CSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTA 387

Query: 484 ALIDMYAKCGSITDARLVFDMM--NDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW 541
           A++DMYAKCGSI  A  +F  +  N      +N+MI+G + HGL    + VF  +   G 
Sbjct: 388 AVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGL 447

Query: 542 RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAA 601
           +P+ +TFVGVL AC + GL+E+G+  F+SM   YGI+P +EHY  MV LLGR G L++A 
Sbjct: 448 KPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAY 507

Query: 602 KLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMAR 661
            L++ +PF+ + +IWRALL AC  H NV+IG ++ Q +L+ E +  A +VLLSNI A A 
Sbjct: 508 DLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADAN 567

Query: 662 SWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSR 710
            WE+A             K PG S+IE  G +H F A D SH     I  ML+ + M+ +
Sbjct: 568 QWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLK 627

Query: 711 KAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHT 770
            AGY+P+ + V+ D+ E+EKE  +  HSEKLALAF L    P+  IRI+KNLRIC DCH 
Sbjct: 628 SAGYVPNTAQVMFDIDEEEKESVVSYHSEKLALAFGLMYCSPTDTIRIVKNLRICADCHK 687

Query: 771 AIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           A K++S+I  REI +RD  RFHHF++G CSC DFW
Sbjct: 688 AFKLVSEIYGREITVRDTMRFHHFRNGSCSCMDFW 722



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 141/522 (27%), Positives = 239/522 (45%), Gaps = 64/522 (12%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKL---NRLPDATKLFDEMPE 119
           L+SC      +  + IH Q +  G    +F+ + L++ +  L   + L  +  LF ++  
Sbjct: 16  LESC---KSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDC 72

Query: 120 RNTISFVTTIQGYTVSSQFVEAVGLFSTLHREG-HELNPFAFTAFLKVLVSMGWAELCPC 178
            N   + T I+GY+ S    EA+ L+ ++  +G    N F F   L     +   E    
Sbjct: 73  PNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHE 132

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-GLFNDCF-------------- 223
           V + + K G +S+ FV  ALI  +SV G +  AR +FD  L  D                
Sbjct: 133 VHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQ 192

Query: 224 -EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM------- 275
            E AL  F +M+  G  P+ FTF  +   C  L+   V K  H    K    +       
Sbjct: 193 PESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLK 252

Query: 276 ----DLYVAVALLDL-----------------------YTKSGEISNARRIFEEMPKKDV 308
               D+Y    L+++                       Y + GEI+ AR++F  M ++DV
Sbjct: 253 SAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDV 312

Query: 309 IPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSL 368
           I W+ MI+ Y+Q     +A+ELF  M    + P++ T V+VL ACA +   DLG +++  
Sbjct: 313 ISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQ 372

Query: 369 VVRVGLLS-DVFVSNALMDVYAKCGRMENSVELFAESPK--RNHVTWNTMIVGYVQLGEV 425
            +  G+ + +  ++ A+MD+YAKCG +++++E+F    K  +    +N+MI G  Q G  
Sbjct: 373 YIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLG 432

Query: 426 GKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN-- 483
             A+ +F +++   +   EVT+  VL AC     +E G ++      A Y +   + +  
Sbjct: 433 ETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNA-YGIKPQMEHYG 491

Query: 484 ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHG 524
            ++D+  + G + +A  LV  M  + N V W A++S    HG
Sbjct: 492 CMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHG 533



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 119/465 (25%), Positives = 197/465 (42%), Gaps = 63/465 (13%)

Query: 47  ITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNR 106
           I   ++  N+ ++   L SC +   L+    +H  ++K G   DLF  N L+++Y     
Sbjct: 102 IAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGN 161

Query: 107 LPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV 166
           L  A  LFDE   R+ +S+ T I+GY   +Q   A+ LF  +   G   + F F A   V
Sbjct: 162 LNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSV 221

Query: 167 LVSMGWAELCPCVFACVYK--LGHDSNAFVGTALIDAFSVCGCVEFARKVFD-------- 216
              +    +   + A VYK     DSN  + +A++D ++ CG +  A +VF         
Sbjct: 222 CSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSA 281

Query: 217 --------------------GLFNDCFE--------------------EALNFFSQMRAV 236
                                LFN   E                    EAL  F +M A+
Sbjct: 282 AAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEAL 341

Query: 237 GFKPNNFTFAFVLKACLGLDTIRVAKSA-HGCALKTCYEMDLYVAVALLDLYTKSGEISN 295
           G KP+  T   VL AC  L    + K   H       +  +  +  A++D+Y K G I +
Sbjct: 342 GIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDS 401

Query: 296 ARRIFEEMPK--KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
           A  IF  + K  K    ++ MIA  AQ  L   A+ +F  +    + P++ TFV VL AC
Sbjct: 402 ALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCAC 461

Query: 354 ATMEGLDLGNQI-HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVT 411
                ++ G ++  S+    G+   +     ++D+  + G +E + +L  + P + N V 
Sbjct: 462 GHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVI 521

Query: 412 WNTMIV-----GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVL 451
           W  ++      G V++GE+    ++    +E Q  A  V  S++L
Sbjct: 522 WRALLSACRTHGNVKIGEIAGQKLL---EMEAQHGARYVLLSNIL 563



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 8/160 (5%)

Query: 450 VLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGS---ITDARLVFDMMN 506
           +L +C S    + G+Q+H  T+       +   + LI  ++  GS   +  +RL+F  ++
Sbjct: 15  LLESCKSF---KQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQID 71

Query: 507 DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR-PNNLTFVGVLSACSNGGLLEQGE 565
             N   WN MI GYS      E + ++  M  +G   PNN TF  +L++C+    LE G 
Sbjct: 72  CPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGH 131

Query: 566 AYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
               S +  +G E  +    +++ L    G+L+ A  L +
Sbjct: 132 E-VHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFD 170


>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
          Length = 643

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 225/615 (36%), Positives = 355/615 (57%), Gaps = 32/615 (5%)

Query: 223 FEEALNFFSQMRAVGFKPNNF--TFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
           F +A++ F +MRA     ++   +    LK+C  L    +  S H  A+++    D + A
Sbjct: 29  FCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHALAIRSGAFADRFTA 88

Query: 281 VALLDLYTK-------------------SGEISNARRIFEEMPKKDVIPWSFMIARYAQT 321
            ALL+LY K                   S    + R++F+EM ++DV+ W+ ++   A+ 
Sbjct: 89  NALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDVVSWNTLVLGCAEE 148

Query: 322 DLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVS 381
               +A+    +M +    P+ FT  +VL   A    +  G ++H    R G  SDVFV 
Sbjct: 149 GRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVG 208

Query: 382 NALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVP 441
           ++L+D+YA C R + SV++F   P R+H+ WN+++ G  Q G V +A+ +F +ML+  V 
Sbjct: 209 SSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVR 268

Query: 442 ATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLV 501
              VT+SS++  C +LA+L  G Q+H   +   ++ +V ++++LIDMY KCG I+ A  +
Sbjct: 269 PVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCI 328

Query: 502 FDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLL 561
           FD M+  + VSW AMI GY++HG + E L +F+ M+    +PN++TF+ VL+ACS+ GL+
Sbjct: 329 FDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLV 388

Query: 562 EQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLG 621
           ++G  YFKSM  +YGI P +EH+ ++   LGRAG LD+A   I  +  +P+  +W  LL 
Sbjct: 389 DKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLR 448

Query: 622 ACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKE 670
           AC +H N  +    A+ I++ EP    +HV+LSN+Y+ +  W +AA            K+
Sbjct: 449 ACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAHLRESMRKKGMKKD 508

Query: 671 PGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEK 730
           P  SWIE +  +H F A D SH   + I   L   + +  + G++P+   V +D+ E+ K
Sbjct: 509 PACSWIEVKSKLHVFVAHDRSHPWYDRIIDALNAFSEQMAREGHVPNTEDVFQDIEEEHK 568

Query: 731 ERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHR 790
              L  HSEKLA+ F +   P  + IR++KNLR+C+DCHT  K ISK+  REI++RD +R
Sbjct: 569 SYVLCGHSEKLAIVFGIISTPAGTKIRVMKNLRVCIDCHTVTKFISKLADREIVVRDANR 628

Query: 791 FHHFQDGCCSCGDFW 805
           FHHF+DG CSCGDFW
Sbjct: 629 FHHFKDGNCSCGDFW 643



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 183/396 (46%), Gaps = 37/396 (9%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLN------------ 105
           S   +L+SC          ++H   ++ G   D F  N LLN+Y K+             
Sbjct: 52  SLPAALKSCAALGLSALGASLHALAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIV 111

Query: 106 RLPDAT-------KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPF 158
            +P ++       K+FDEM ER+ +S+ T + G     +  EA+G    + REG   + F
Sbjct: 112 DVPGSSTAFESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSF 171

Query: 159 AFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL 218
             +  L +       +    V    ++ G DS+ FVG++LID ++ C   +++ KVFD L
Sbjct: 172 TLSTVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNL 231

Query: 219 F----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAK 262
                            N   EEAL  F +M   G +P   TF+ ++  C  L ++R  K
Sbjct: 232 PVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGK 291

Query: 263 SAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTD 322
             H   +   +E +++++ +L+D+Y K GEIS A  IF++M   DV+ W+ MI  YA   
Sbjct: 292 QLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHG 351

Query: 323 LSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVS 381
            + +A+ LF RM      PN  TF++VL AC+    +D G     S+    G++  +   
Sbjct: 352 PAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHF 411

Query: 382 NALMDVYAKCGRMENSVELFAE-SPKRNHVTWNTMI 416
            AL D   + G ++ +    ++   K     W+T++
Sbjct: 412 AALADTLGRAGELDEAYNFISKMQIKPTASVWSTLL 447



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 169/361 (46%), Gaps = 35/361 (9%)

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSV---LQACATMEGLDLGNQIHS 367
           W+  I   A      DAV LF RMR A  AP      S+   L++CA +    LG  +H+
Sbjct: 16  WAQQIRAAAAEGHFCDAVSLFLRMR-ASAAPRSSVPASLPAALKSCAALGLSALGASLHA 74

Query: 368 LVVRVGLLSDVFVSNALMDVYAK--CGRM-----------------ENSVELFAESPKRN 408
           L +R G  +D F +NAL+++Y K  C  +                 E+  ++F E  +R+
Sbjct: 75  LAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERD 134

Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHC 468
            V+WNT+++G  + G   +A+    KM  E       T S+VL   A  A ++ G++VH 
Sbjct: 135 VVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHG 194

Query: 469 LTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAE 528
              +  +D DV V ++LIDMYA C     +  VFD +   + + WN++++G + +G   E
Sbjct: 195 FAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEE 254

Query: 529 VLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMV 588
            L +F  M Q G RP  +TF  ++  C N   L  G+     ++   G E  +   +S++
Sbjct: 255 ALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICG-GFEDNVFISSSLI 313

Query: 589 SLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN----------NVEIGRLSAQH 638
            +  + G +  A  + + +   P V+ W A++    +H            +E+G     H
Sbjct: 314 DMYCKCGEISIAHCIFDKMS-SPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNH 372

Query: 639 I 639
           I
Sbjct: 373 I 373



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 16/214 (7%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +S + +T L    +  D++  + +H    + G   D+F  + L+++Y    R   + K+F
Sbjct: 169 DSFTLSTVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVF 228

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D +P R+ I + + + G   +    EA+G+F  + + G    P  F++ + V  ++    
Sbjct: 229 DNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLR 288

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------- 218
               + A V   G + N F+ ++LID +  CG +  A  +FD +                
Sbjct: 289 FGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYA 348

Query: 219 FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKAC 252
            +    EAL  F +M     KPN+ TF  VL AC
Sbjct: 349 LHGPAREALVLFERMELGNAKPNHITFLAVLTAC 382


>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
          Length = 513

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 215/514 (41%), Positives = 322/514 (62%), Gaps = 12/514 (2%)

Query: 303 MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG 362
           M  +D+  W+ +IA YAQ D+  +A+ L   M +    PN FTF S+L+A        +G
Sbjct: 1   MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
            QIH+L V+     DV+V +AL+D+YA+CGRM+ ++ +F +   +N V+WN +I G+ + 
Sbjct: 61  EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 120

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
           G+    ++MF++M      AT  TYSSV  A A + ALE G  VH   +K+   +   V 
Sbjct: 121 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVG 180

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
           N ++DMYAK GS+ DAR VFD ++  + V+WN+M++ ++ +GL  E +  F+ M++ G  
Sbjct: 181 NTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVH 240

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
            N +TF+ +L+ACS+GGL+++G+ YF  M+  + +EP I+HY ++V LLGRAG L+ A  
Sbjct: 241 LNQITFLSILTACSHGGLVKEGKQYF-DMMKEHNLEPEIDHYVTVVDLLGRAGLLNDALV 299

Query: 603 LIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARS 662
            I  +P +P+  +W ALLG+C +H N +IG+ +A H+ + +P+D    VLL NIYA    
Sbjct: 300 FIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQ 359

Query: 663 WEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRK 711
           W+ AA            KEP  SW+E +  VH F A D +H     I    E ++++ RK
Sbjct: 360 WDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRK 419

Query: 712 AGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTA 771
           AGY+P+   VL  V E E++  L  HSEK+ALAFAL  MP  + IRI+KN+RIC DCH+A
Sbjct: 420 AGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSA 479

Query: 772 IKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            + ISK+ +REI++RD +RFHHF  G CSCGD+W
Sbjct: 480 FRYISKVFEREIVVRDTNRFHHFSSGSCSCGDYW 513



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 157/305 (51%), Gaps = 1/305 (0%)

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           ND  +EAL     M    FKPN FTFA +LKA     +  + +  H   +K  +  D+YV
Sbjct: 19  NDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYV 78

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
             ALLD+Y + G +  A  +F+++  K+ + W+ +IA +A+       + +F  M++   
Sbjct: 79  GSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGF 138

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
               FT+ SV  A A +  L+ G  +H+ +++ G     FV N ++D+YAK G M ++ +
Sbjct: 139 EATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARK 198

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +F    K++ VTWN+M+  + Q G   +A+  F +M +  V   ++T+ S+L AC+    
Sbjct: 199 VFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGL 258

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARL-VFDMMNDWNEVSWNAMIS 518
           ++ G Q   +  + N + ++     ++D+  + G + DA + +F M        W A++ 
Sbjct: 259 VKEGKQYFDMMKEHNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLG 318

Query: 519 GYSMH 523
              MH
Sbjct: 319 SCRMH 323



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 153/317 (48%), Gaps = 17/317 (5%)

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
           M  R+  S+ + I GY  +    EA+GL   + R   + N F F + LK   +   + + 
Sbjct: 1   MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF------ 223
             + A   K     + +VG+AL+D ++ CG ++ A  VFD L       +N         
Sbjct: 61  EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 120

Query: 224 ---EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
              E  L  F++M+  GF+  +FT++ V  A  G+  +   K  H   +K+   +  +V 
Sbjct: 121 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVG 180

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
             +LD+Y KSG + +AR++F+ + KKD++ W+ M+  +AQ  L  +AV  F  MR+  V 
Sbjct: 181 NTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVH 240

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
            NQ TF+S+L AC+    +  G Q   ++    L  ++     ++D+  + G + +++  
Sbjct: 241 LNQITFLSILTACSHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVDLLGRAGLLNDALVF 300

Query: 401 FAESP-KRNHVTWNTMI 416
             + P K     W  ++
Sbjct: 301 IFKMPMKPTAAVWGALL 317



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 119/268 (44%), Gaps = 16/268 (5%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  ++A+ L++   +        IH   +K     D++  + LL++Y +  R+  A  +F
Sbjct: 40  NGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVF 99

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D++  +N +S+   I G+         + +F+ + R G E   F +++    +  +G  E
Sbjct: 100 DQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALE 159

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF---- 223
               V A + K G   +AFVG  ++D ++  G +  ARKVFD +       +N       
Sbjct: 160 QGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFA 219

Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                 EA+  F +MR  G   N  TF  +L AC     ++  K       +   E ++ 
Sbjct: 220 QYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEHNLEPEID 279

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKK 306
             V ++DL  ++G +++A     +MP K
Sbjct: 280 HYVTVVDLLGRAGLLNDALVFIFKMPMK 307


>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 249/658 (37%), Positives = 371/658 (56%), Gaps = 66/658 (10%)

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FND 221
           C+ A +   G   + F+ T L++ ++  G V  +R  FD +                 N 
Sbjct: 37  CLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNG 96

Query: 222 CFEEALNFFSQMRAVG-FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
            F EA+  F Q+  V   +P+ +TF  VLKAC    T+   +  H  A K  ++ +++VA
Sbjct: 97  HFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVFVA 153

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
            +L+ +Y++ G    AR +F++MP +D+  W+ MI+   Q   +  A+++   MR   + 
Sbjct: 154 ASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIK 213

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
            N  T VS+L                           VFV     D+YAK G ++++ ++
Sbjct: 214 MNFVTVVSILP--------------------------VFV-----DMYAKLGLLDSAHKV 242

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE--QVPATEVTYSSVLRACASLA 458
           F   P ++ ++WNT+I GY Q G   +A+ ++ KM+EE  ++   + T+ S+L A A + 
Sbjct: 243 FEIIPVKDVISWNTLITGYAQNGLASEAIEVY-KMMEECKEIIPNQGTWVSILPAYAHVG 301

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           AL+ GM++H   +K N  +DV VA  LID+Y KCG + DA  +F  +   + V+WNA+IS
Sbjct: 302 ALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIIS 361

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
            + +HG + + LK+F  M   G +P+++TFV +LSACS+ G +E+G+  F+ M   YGI+
Sbjct: 362 CHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM-QEYGIK 420

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P ++HY  MV LLGRAG+L+ A   I+ +P QP   IW ALLGAC IH N+E+G+ ++  
Sbjct: 421 PSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDR 480

Query: 639 ILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRA 687
           + + + ++   +VLLSNIYA    WE           +   K PG S IE    V  F  
Sbjct: 481 LFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYT 540

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFAL 747
           G+ SH     I   L  L  K +  GYIPD S VL+DV EDEKE  L  HSE+LA+AF +
Sbjct: 541 GNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGI 600

Query: 748 FKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
              PP SPIRI KNLR+C DCH A K IS+I QREI++RD +RFHHF+DG CSCGD+W
Sbjct: 601 ISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 658



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 134/470 (28%), Positives = 219/470 (46%), Gaps = 55/470 (11%)

Query: 75  AMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTV 134
           A  +H  ++  G    +F +  L+N+Y  L  +  +   FD++P+++  ++ + I  Y  
Sbjct: 35  AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 94

Query: 135 SSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFV 194
           +  F EA+G F  L     E+ P  F  F  VL + G       +    +KLG   N FV
Sbjct: 95  NGHFHEAIGCFYQLLLVS-EIRP-DFYTFPPVLKACGTLVDGRKIHCWAFKLGFQWNVFV 152

Query: 195 GTALIDAFSVCGCVEFARKVFD---------------GLF-NDCFEEALNFFSQMRAVGF 238
             +LI  +S  G    AR +FD               GL  N    +AL+   +MR  G 
Sbjct: 153 AASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGI 212

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
           K N  T   +L                                  +D+Y K G + +A +
Sbjct: 213 KMNFVTVVSILPV-------------------------------FVDMYAKLGLLDSAHK 241

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ-AFVAPNQFTFVSVLQACATME 357
           +FE +P KDVI W+ +I  YAQ  L+ +A+E++  M +   + PNQ T+VS+L A A + 
Sbjct: 242 VFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVG 301

Query: 358 GLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIV 417
            L  G +IH  V++  L  DVFV+  L+DVY KCGR+ +++ LF + P+ + VTWN +I 
Sbjct: 302 ALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIIS 361

Query: 418 GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM 477
            +   G   K + +F +ML+E V    VT+ S+L AC+    +E G    C  +   Y +
Sbjct: 362 CHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKW--CFRLMQEYGI 419

Query: 478 DVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHG 524
              + +   ++D+  + G +  A   + DM    +   W A++    +HG
Sbjct: 420 KPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHG 469



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 70/157 (44%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  ++ + L +      LQ  M IH +V+K    LD+F    L++VY K  RL DA  LF
Sbjct: 286 NQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLF 345

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
            ++P+ +++++   I  + +     + + LF  +  EG + +   F + L      G+ E
Sbjct: 346 YQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVE 405

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFA 211
                F  + + G   +      ++D     G +E A
Sbjct: 406 EGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMA 442


>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
 gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
          Length = 574

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 226/555 (40%), Positives = 325/555 (58%), Gaps = 11/555 (1%)

Query: 262 KSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQT 321
           K  H     T    DL VA  LL +  K  ++  A  +F +M ++D + WS MI  + + 
Sbjct: 20  KQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKN 79

Query: 322 DLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVS 381
                  + F  + +A   P+ F+   V++AC    GL +G  IHS V++ GL  D FV 
Sbjct: 80  GDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVC 139

Query: 382 NALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVP 441
           + L+D+YAKCG ++N+ +LF   PK++ VT   MI GY + G+  ++ ++F +M  +   
Sbjct: 140 STLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFV 199

Query: 442 ATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLV 501
             +V   +++ ACA L A+     VH       Y +DV +  A+IDMYAKCGSI  +R +
Sbjct: 200 PDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREI 259

Query: 502 FDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLL 561
           FD M   N +SW+AMI  Y  HG   E L++F +M   G  PN +TF+ +L ACS+ GL+
Sbjct: 260 FDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLV 319

Query: 562 EQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLG 621
           + G   F  M  +YG+ P ++HYT MV LLGRAG LD+A +LIE +  +    IW A LG
Sbjct: 320 DDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFLG 379

Query: 622 ACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKE 670
           AC IH  V++   +A+ +L  + ++   ++LLSNIYA A  W+  A            K 
Sbjct: 380 ACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKIRNLMAKRRLKKI 439

Query: 671 PGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEK 730
           PG +WIE   +++ F AGD SH   N I  ML+ L+ K   AGY+PD ++VL DV E+ K
Sbjct: 440 PGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLSQKLESAGYVPDTNSVLHDVDEEVK 499

Query: 731 ERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHR 790
              L  HSEKLA+AF L   P  +PIRI KNLR+C DCH+  K++S I QR+II+RD +R
Sbjct: 500 LGILHAHSEKLAIAFGLIATPDGTPIRITKNLRVCGDCHSFCKLVSAITQRDIIVRDANR 559

Query: 791 FHHFQDGCCSCGDFW 805
           FHHF++G CSCGD+W
Sbjct: 560 FHHFKEGICSCGDYW 574



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 163/306 (53%), Gaps = 2/306 (0%)

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           N  +E     F ++   G KP+NF+  FV+KAC     + + +  H   LK    +D +V
Sbjct: 79  NGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFV 138

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
              L+D+Y K G I NA+++F+ MPKKD++  + MIA YA+     ++  LF +MR+   
Sbjct: 139 CSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGF 198

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
            P++   V+++ ACA +  ++    +H  V       DV +  A++D+YAKCG +++S E
Sbjct: 199 VPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSRE 258

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +F    ++N ++W+ MI  Y   G+  +A+ +F  ML   +    +T+ S+L AC+    
Sbjct: 259 IFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGL 318

Query: 460 LEPGMQVHCL-TVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMI 517
           ++ G+Q+  L +V      DV     ++D+  + G +  A RL+ +M  + +E  W A +
Sbjct: 319 VDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFL 378

Query: 518 SGYSMH 523
               +H
Sbjct: 379 GACRIH 384



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/341 (28%), Positives = 166/341 (48%), Gaps = 17/341 (4%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           +H QV   G   DL   N LL +  K   L  A  LF++M ER+ +S+   I G+  +  
Sbjct: 22  VHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKNGD 81

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
           +      F  L R G + + F+    +K         +   + + V K G   + FV + 
Sbjct: 82  YERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCST 141

Query: 198 LIDAFSVCGCVEFARKVFDGL--------------FNDCFE--EALNFFSQMRAVGFKPN 241
           L+D ++ CG ++ A+++FD +              + +C +  E+   F QMR  GF P+
Sbjct: 142 LVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPD 201

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
                 ++ AC  L  +  A+  H       Y +D+ +  A++D+Y K G I ++R IF+
Sbjct: 202 KVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFD 261

Query: 302 EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL 361
            M +K+VI WS MI  Y       +A+ELF  M  + + PN+ TF+S+L AC+    +D 
Sbjct: 262 RMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLVDD 321

Query: 362 GNQIHSLV-VRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           G Q+ SL+ V  G+  DV     ++D+  + GR++ ++ L 
Sbjct: 322 GLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLI 362



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 80/330 (24%), Positives = 140/330 (42%), Gaps = 35/330 (10%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           S+ ++ S    +++C     L     IH  VLK G  LD F  + L+++Y K   + +A 
Sbjct: 97  SKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAK 156

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
           +LFD MP+++ ++    I GY    +  E+  LF  + R+G   +  A    +     +G
Sbjct: 157 QLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLG 216

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL------------- 218
                  V   V    +  +  +GTA+ID ++ CG ++ +R++FD +             
Sbjct: 217 AMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIG 276

Query: 219 ---FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL-------GLDTIRVAKSAHGCA 268
              ++    EAL  F  M   G  PN  TF  +L AC        GL    +   ++G  
Sbjct: 277 AYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGV- 335

Query: 269 LKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIAR---YAQTDLS 324
                  D+     ++DL  ++G +  A R+ E M  +KD   W   +     + Q DL+
Sbjct: 336 -----RPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFLGACRIHRQVDLA 390

Query: 325 IDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
             A +L   ++     P  +  +S + A A
Sbjct: 391 EKAAKLLLSLQTQ--NPGHYILLSNIYANA 418


>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 882

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 251/779 (32%), Positives = 421/779 (54%), Gaps = 29/779 (3%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           + +++ + +++C    D +    ++ Q+L+ G   DL+  N L+++Y ++  L  A ++F
Sbjct: 105 DKYTFPSVIKACAGLFDAEMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVF 164

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           DEMP R+ +S+ + I GY+    + EA+ ++  L       + F  ++ L    ++   +
Sbjct: 165 DEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVK 224

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FN------- 220
               +     K G +S + V   L+  +        AR+VFD +       +N       
Sbjct: 225 QGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYL 284

Query: 221 --DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
             +  EE++  F +     FKP+  T   VL AC  L  + +AK  +   L+  + ++  
Sbjct: 285 KLEMVEESVKMFLE-NLDQFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLEST 343

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V   L+D+Y K G++  AR +F  M  KD + W+ +I+ Y Q+   ++A++LF  M    
Sbjct: 344 VKNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIME 403

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
              +  T++ ++     +  L  G  +HS  ++ G+  D+ VSNAL+D+YAKCG + +S+
Sbjct: 404 EQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSL 463

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
           ++F      + VTWNT+I   V+ G+    + + ++M + +V     T+   L  CASLA
Sbjct: 464 KIFNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLA 523

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           A   G ++HC  ++  Y+ ++ + NALI+MY+KCG +  +  VF+ M+  + V+W  MI 
Sbjct: 524 AKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIY 583

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
            Y M+G   + L+ F  M++ G  P+++ F+ ++ ACS+ GL+E+G A F+ M  +Y I+
Sbjct: 584 AYGMYGEGEKALESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACFEKMKTHYKID 643

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P IEHY  +V LL R+  + KA + I+ +P +P   IW ++L AC    ++E     ++ 
Sbjct: 644 PMIEHYACVVDLLSRSQKISKAEEFIQAMPIEPDASIWASVLRACRTSGDMETAERVSRR 703

Query: 639 ILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRA 687
           I++  P+D    +L SN YA  R W+K +            K PG SWIE    VH F +
Sbjct: 704 IIELNPDDPGYSILASNAYAALRKWDKVSLIRKSVRDKHIKKNPGYSWIEIGKKVHVFCS 763

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDV-REDEKERYLWVHSEKLALAFA 746
           GD S      I   LE L     K GYIPD   V +++  E+EK R +  HSE+LA+AF 
Sbjct: 764 GDDSAPQSEAIHKSLEILYSLMAKEGYIPDSREVSQNLEEEEEKRRLICGHSERLAIAFG 823

Query: 747 LFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           L    P +P++++KNLR+C DCH   K+ISKIV REI++RD +RFH F+DG CSC D W
Sbjct: 824 LLNTEPGTPLQVMKNLRVCSDCHEVTKLISKIVGREILVRDANRFHLFKDGICSCKDRW 882



 Score =  232 bits (592), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 161/613 (26%), Positives = 302/613 (49%), Gaps = 25/613 (4%)

Query: 69  NDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM-PERNTISFVT 127
           + +L     IH  V+  G     F +  L++ Y        +  +F  + P +N   + +
Sbjct: 17  SSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNVYIWNS 76

Query: 128 TIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLG 187
            I+ ++ +  F +A+  +  L       + + F + +K    +  AE+   V+  + ++G
Sbjct: 77  IIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQILEMG 136

Query: 188 HDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFS 231
            +S+ +VG AL+D +S  G +  AR+VFD +                 +  +EEAL  + 
Sbjct: 137 FESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYH 196

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
           ++R     P++FT + VL A   L  ++  +  HG  LK+       V   LL +Y K  
Sbjct: 197 ELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFS 256

Query: 292 EISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQ 351
             ++ARR+F+EM  +D + ++ MI  Y + ++  ++V++F      F  P+  T  SVL 
Sbjct: 257 RPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLDQF-KPDILTVTSVLC 315

Query: 352 ACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
           AC  +  L L   I++ ++R G + +  V N L+DVYAKCG M  + ++F     ++ V+
Sbjct: 316 ACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVS 375

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
           WN++I GY+Q G++ +AM +F  M+  +  A  +TY  ++     LA L+ G  +H   +
Sbjct: 376 WNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGI 435

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
           K+   +D+ V+NALIDMYAKCG + D+  +F+ M   + V+WN +IS     G  A  L+
Sbjct: 436 KSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATGLQ 495

Query: 532 VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLL 591
           V   M++    P+  TF+  L  C++      G+      +  +G E  ++   +++ + 
Sbjct: 496 VTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKE-IHCCLLRFGYESELQIGNALIEMY 554

Query: 592 GRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPED--EAT 649
            + G L+ + ++ E +  +  V+ W  ++ A  ++     G  + +  +D E       +
Sbjct: 555 SKCGCLESSFRVFERMS-RRDVVTWTGMIYAYGMYGE---GEKALESFVDMEKSGIVPDS 610

Query: 650 HVLLSNIYAMARS 662
            V ++ IYA + S
Sbjct: 611 VVFIALIYACSHS 623



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/411 (26%), Positives = 216/411 (52%), Gaps = 7/411 (1%)

Query: 246 AFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM-P 304
           AF+ +A      +   +  H   +    +   + +  L+D Y+     +++  +F  + P
Sbjct: 8   AFISRALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSP 67

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
            K+V  W+ +I  +++      A+E + ++R++ V+P+++TF SV++ACA +   ++G+ 
Sbjct: 68  AKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
           ++  ++ +G  SD++V NAL+D+Y++ G +  + ++F E P R+ V+WN++I GY   G 
Sbjct: 128 VYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGY 187

Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA 484
             +A+ ++ ++    +     T SSVL A A+L  ++ G  +H  T+K+  +   VV N 
Sbjct: 188 YEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNG 247

Query: 485 LIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPN 544
           L+ MY K    TDAR VFD M   + V++N MI GY    +  E +K+F L     ++P+
Sbjct: 248 LLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMF-LENLDQFKPD 306

Query: 545 NLTFVGVLSACSNGGLLEQGEAYFKSMV-ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKL 603
            LT   VL AC +   L   +  +  M+ A + +E  +++   ++ +  + G +  A  +
Sbjct: 307 ILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNI--LIDVYAKCGDMITARDV 364

Query: 604 IEGIPFQPSVMIWRALLGACIIHNNV-EIGRLSAQHILDFEPEDEATHVLL 653
              +  + +V  W +++   I   ++ E  +L    ++  E  D  T+++L
Sbjct: 365 FNSMECKDTVS-WNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLML 414



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 88/189 (46%), Gaps = 3/189 (1%)

Query: 443 TEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVF 502
           T V+ + + RA +S + L    ++H L +    D     +  LID Y+   +   +  VF
Sbjct: 3   TRVSSAFISRALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVF 62

Query: 503 DMMNDWNEVS-WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLL 561
             ++    V  WN++I  +S +G   + L+ +  +++    P+  TF  V+ AC+     
Sbjct: 63  RRVSPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDA 122

Query: 562 EQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLG 621
           E G+  +K ++   G E  +    ++V +  R G L +A ++ + +P +  ++ W +L+ 
Sbjct: 123 EMGDLVYKQIL-EMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVR-DLVSWNSLIS 180

Query: 622 ACIIHNNVE 630
               H   E
Sbjct: 181 GYSSHGYYE 189


>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 719

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 268/761 (35%), Positives = 402/761 (52%), Gaps = 74/761 (9%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L++CI   DL T  ++H   +K       + +N  + +Y K  RL  A K F ++ +   
Sbjct: 15  LKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDP-- 72

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
                                            N F+F A +         E  P +   
Sbjct: 73  ---------------------------------NVFSFNAIIAAYAK----ESRPLIAHQ 95

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNN 242
           ++    + +      LI A++ CG  E A              AL  FS MR +G   + 
Sbjct: 96  LFDQIPEPDLVSYNTLISAYADCG--ETA-------------PALGLFSGMREMGLDMDG 140

Query: 243 FTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEE 302
           FT + V+ AC   D + +    H  A+ + ++  + V  ALL  Y K+G++ +A+R+F  
Sbjct: 141 FTLSAVITACC--DDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYG 198

Query: 303 MPK-KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL 361
           M   +D + W+ MI  Y Q      A+ LF  M +  +  + FT  SVL A   +E L  
Sbjct: 199 MGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSG 258

Query: 362 GNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR-MENSVELFAESPKRNHVTWNTMIVGYV 420
           G Q H  +++ G   +  V + L+D+Y+KCG  M +  ++F E  + + V WNTM+ GY 
Sbjct: 259 GLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYS 318

Query: 421 QLGE-VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD- 478
           Q  E +  A+  F +M        + ++  V+ AC++L++   G Q+H L +K++   + 
Sbjct: 319 QNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNR 378

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
           + V NALI MY+KCG++ DAR +FD M + N VS N+MI+GY+ HG+  E L +F  M +
Sbjct: 379 ISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLE 438

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLD 598
           R   P ++TF+ VLSAC++ G +E+G  YF  M   + IEP  EHY+ M+ LLGRAG L 
Sbjct: 439 RQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLS 498

Query: 599 KAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYA 658
           +A  LI  +PF P  + W +LLGAC  H N+E+   +A  +L  EP + A +V+LSN+YA
Sbjct: 499 EAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYA 558

Query: 659 MARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNM 707
            A  WE+ A+           K+PG SWIE +  +H F A D+SH  +  I   LE ++ 
Sbjct: 559 SAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSG 618

Query: 708 KSRKAGYIPDLS-AVLRD--VREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRI 764
           K ++AGY+PD+  A+++D   R  EKE  L  HSEKLA+AF L       P+ ++KNLRI
Sbjct: 619 KMKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPVLVVKNLRI 678

Query: 765 CVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           C DCH AIK IS I  REI +RD HRFH F++G CSCGD+W
Sbjct: 679 CGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 198/395 (50%), Gaps = 36/395 (9%)

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR------ 298
           F  +LK C+    +   KS H   +K+      Y +   + LY+K G ++ AR+      
Sbjct: 11  FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70

Query: 299 -------------------------IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
                                    +F+++P+ D++ ++ +I+ YA    +  A+ LF  
Sbjct: 71  DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           MR+  +  + FT  +V+ AC    GL +G Q+HS+ V  G  S V V+NAL+  Y K G 
Sbjct: 131 MREMGLDMDGFTLSAVITACCDDVGL-IG-QLHSVAVSSGFDSYVSVNNALLTYYGKNGD 188

Query: 394 MENSVELF-AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLR 452
           ++++  +F      R+ V+WN+MIV Y Q  E  KA+ +F +M+   +     T +SVL 
Sbjct: 189 LDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLT 248

Query: 453 ACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKC-GSITDARLVFDMMNDWNEV 511
           A   L  L  G+Q H   +K  +  +  V + LID+Y+KC G ++D R VF+ + + + V
Sbjct: 249 AFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLV 308

Query: 512 SWNAMISGYSMH-GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKS 570
            WN M+SGYS +     + L+ F  MQ  G+RPN+ +FV V+SACSN     QG+     
Sbjct: 309 LWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSL 368

Query: 571 MVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
            + +      I    +++++  + G+L  A +L +
Sbjct: 369 ALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFD 403



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 91/216 (42%), Gaps = 36/216 (16%)

Query: 439 QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDA 498
           Q+  T   +  +L+ C +   L  G  +H L +K+        +N  I +Y+KCG +  A
Sbjct: 3   QISWTLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWA 62

Query: 499 RLVFDMMNDWNE-------------------------------VSWNAMISGYSMHGLSA 527
           R  F  ++D N                                VS+N +IS Y+  G +A
Sbjct: 63  RKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETA 122

Query: 528 EVLKVFDLMQQRGWRPNNLTFVGVLSACSNG-GLLEQGEAYFKSMVANYGIEPCIEHYTS 586
             L +F  M++ G   +  T   V++AC +  GL+ Q      S+  + G +  +    +
Sbjct: 123 PALGLFSGMREMGLDMDGFTLSAVITACCDDVGLIGQ----LHSVAVSSGFDSYVSVNNA 178

Query: 587 MVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           +++  G+ G LD A ++  G+      + W +++ A
Sbjct: 179 LLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVA 214


>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
          Length = 724

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 223/553 (40%), Positives = 333/553 (60%), Gaps = 13/553 (2%)

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY-EMDLYVAVALLDLYTKSGEISNARR 298
           P+   ++ +LK C  L  +   +  H   + + + +  L +   ++++Y K G + +ARR
Sbjct: 85  PDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARR 144

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           +F+EMP KD++ W+ +IA ++Q +   DA+ LF +M +  + PN FT  S+L+A  +  G
Sbjct: 145 MFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHG 204

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           LD G Q+H+  ++ G  S V+V +AL+D+YA+CG M+ +   F   P ++ V+WN +I G
Sbjct: 205 LDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISG 264

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           + + GE   A+ +  KM  +    T  TYSSV  ACAS+ ALE G  VH   +K+   + 
Sbjct: 265 HARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLI 324

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
             + N L+DMYAK GSI DA+ VFD +   + VSWN M++G + HGL  E L  F+ M +
Sbjct: 325 AFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLR 384

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLD 598
            G  PN ++F+ VL+ACS+ GLL++G  YF+ ++  Y +EP + HY + V LLGR G LD
Sbjct: 385 IGIEPNEISFLCVLTACSHSGLLDEGLYYFE-LMKKYKVEPDVPHYVTFVDLLGRVGLLD 443

Query: 599 KAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYA 658
           +A + I  +P +P+  +W ALLGAC +H N+E+G  +A+   + +P D    +LLSNIYA
Sbjct: 444 RAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYA 503

Query: 659 MARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNM 707
            A  W           E    K+P  SW+E +  VH F A D +H  +  IRG  E ++ 
Sbjct: 504 SAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPQIKEIRGKWEEISG 563

Query: 708 KSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVD 767
           K ++ GY+PD S VL  V + E+E  L  HSEKLALAFAL   P  SPIRI KN+R+C D
Sbjct: 564 KIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNIRVCGD 623

Query: 768 CHTAIKIISKIVQ 780
           CH AIK +SKI +
Sbjct: 624 CHAAIKFVSKIYE 636



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 185/365 (50%), Gaps = 19/365 (5%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLD--LFATNVLLNVYVKLNRLPDATKLFDE 116
           Y+  L+ C +   ++    +H  ++   + LD  L   N+++N+Y K   L DA ++FDE
Sbjct: 90  YSKLLKECTRLGKVEQGRIVHAHLVDS-HFLDNHLVLQNIIVNMYAKCGCLDDARRMFDE 148

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
           MP ++ +++   I G++ +++  +A+ LF  + R G + N F  ++ LK   S    +  
Sbjct: 149 MPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPG 208

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDC-------------- 222
             + A   K G+ S+ +VG+AL+D ++ CG ++ A+  FDG+                  
Sbjct: 209 TQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARK 268

Query: 223 --FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
              E AL+   +M+   F+P +FT++ V  AC  +  +   K  H   +K+  ++  ++ 
Sbjct: 269 GEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIG 328

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
             LLD+Y K+G I +A+R+F+ + K DV+ W+ M+   AQ  L  + ++ F +M +  + 
Sbjct: 329 NTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIE 388

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           PN+ +F+ VL AC+    LD G     L+ +  +  DV      +D+  + G ++ +   
Sbjct: 389 PNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERF 448

Query: 401 FAESP 405
             E P
Sbjct: 449 IREMP 453



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 112/266 (42%), Gaps = 16/266 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  + ++ L++      L     +H   LK G    ++  + L+++Y +   +  A   F
Sbjct: 188 NHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAF 247

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D MP ++ +S+   I G+    +   A+ L   + R+  +   F +++      S+G  E
Sbjct: 248 DGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALE 307

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-----------FNDCF 223
               V A + K G    AF+G  L+D ++  G ++ A++VFD L              C 
Sbjct: 308 QGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCA 367

Query: 224 E-----EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
           +     E L+ F QM  +G +PN  +F  VL AC     +           K   E D+ 
Sbjct: 368 QHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVP 427

Query: 279 VAVALLDLYTKSGEISNARRIFEEMP 304
             V  +DL  + G +  A R   EMP
Sbjct: 428 HYVTFVDLLGRVGLLDRAERFIREMP 453


>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
          Length = 1166

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 254/778 (32%), Positives = 414/778 (53%), Gaps = 34/778 (4%)

Query: 55   NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
            N +++AT   SC   +D      +   +++ G    +   N L++++   + + +A  +F
Sbjct: 296  NQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVF 355

Query: 115  DEMPERNTISFVTTIQGYTVSSQFVEAVGLF---STLHREGHELNPFAFTAFLKVLVSMG 171
            D M E + IS+   I  Y       E++  F     LH E +     +  +    + ++ 
Sbjct: 356  DHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLK 415

Query: 172  WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND---------- 221
            W      +   V KLG DSN  +   L+  +S  G  E A  VF  +             
Sbjct: 416  WGR---GIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMA 472

Query: 222  CFEE------ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
            C+ +       L   +++  +G   N+ TFA  L AC   + +  +K  H   +   +  
Sbjct: 473  CYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHD 532

Query: 276  DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
             L V  AL+ +Y K G +  A+++ + MP+ D + W+ +I  +A+ +   +AV+ +  +R
Sbjct: 533  FLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIR 592

Query: 336  QAFVAPNQFTFVSVLQACATMEGL-DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
            +  +  N  T VSVL AC+  + L   G  IH+ +V  G  SD +V N+L+ +YAKCG +
Sbjct: 593  EKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDL 652

Query: 395  ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
             +S  +F     ++ +TWN M+      G   +A+ +F +M    V   + ++S  L A 
Sbjct: 653  NSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAAT 712

Query: 455  ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
            A+LA LE G Q+H L +K  ++ D+ V NA +DMY KCG + D   +     + + +SWN
Sbjct: 713  ANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWN 772

Query: 515  AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
             +IS ++ HG   +  + F  M + G +P+++TFV +LSAC++GGL+++G AY+ SM   
Sbjct: 773  ILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTRE 832

Query: 575  YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL 634
            +G+ P IEH   ++ LLGR+G L  A   I+ +P  P+ + WR+LL AC IH N+E+ R 
Sbjct: 833  FGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARK 892

Query: 635  SAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVH 683
            +A+H+L+ +P D++ +VL SN+ A +  WE   +           K+P  SW++ +  VH
Sbjct: 893  TAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVH 952

Query: 684  YFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLAL 743
             F  G+  H   + I   L  L   +++AGY+PD S  L D+ E++KE  LW HSE+LAL
Sbjct: 953  SFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLAL 1012

Query: 744  AFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSC 801
            AF L   P SS +RI KNLR+C DCH+  K +S IV R+I++RD +RFHHF  G CSC
Sbjct: 1013 AFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSC 1070



 Score =  250 bits (638), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 170/598 (28%), Positives = 292/598 (48%), Gaps = 28/598 (4%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           +H  V+K G   D++    L++ Y  +  + +A KLF+EMP+ N +S+ + + GY+ S  
Sbjct: 218 VHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGN 277

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE---LCPCVFACVYKLGHDSNAFV 194
             E + ++  + +EG   N      F  V  S G  E   L   V   + + G + +  V
Sbjct: 278 PGEVLNVYQRMRQEGVSGNQ---NTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSV 334

Query: 195 GTALIDAFSVCGCVEFARKVFDGLFNDC-----------------FEEALNFFSQMRAVG 237
             +LI  FS    VE A  VFD + N+C                   E+L  F  MR + 
Sbjct: 335 ANSLISMFSSFSSVEEACYVFDHM-NECDIISWNAMISAYAHHGLCRESLRCFHWMRHLH 393

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR 297
            + N+ T + +L  C  +D ++  +  HG  +K   + ++ +   LL LY+++G   +A 
Sbjct: 394 NETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAE 453

Query: 298 RIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATME 357
            +F+ M ++D+I W+ M+A Y Q    +D +++   + Q     N  TF S L AC+  E
Sbjct: 454 LVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPE 513

Query: 358 GLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIV 417
            L     +H+L++  G    + V NAL+ +Y K G M  + ++    P+ + VTWN +I 
Sbjct: 514 CLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIG 573

Query: 418 GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC-ASLAALEPGMQVHCLTVKANYD 476
           G+ +  E  +A+  +  + E+ +PA  +T  SVL AC A    L+ GM +H   V   ++
Sbjct: 574 GHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFE 633

Query: 477 MDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLM 536
            D  V N+LI MYAKCG +  +  +FD + + + ++WNAM++  + HG   E LK+F  M
Sbjct: 634 SDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEM 693

Query: 537 QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGH 596
           +  G   +  +F G L+A +N  +LE+G+     +V   G E  +    + + + G+ G 
Sbjct: 694 RNVGVNLDQFSFSGGLAATANLAVLEEGQQ-LHGLVIKLGFESDLHVTNAAMDMYGKCGE 752

Query: 597 LDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPE-DEATHVLL 653
           +    K++   P   S + W  L+ A   H   +  R +   +L   P+ D  T V L
Sbjct: 753 MHDVLKMLPQ-PINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSL 809



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 165/556 (29%), Positives = 281/556 (50%), Gaps = 20/556 (3%)

Query: 89  LDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTL 148
           L +F TN L+N+Y K   +  A  +FDEM  RN  S+ T + GY     + EAVGLF  +
Sbjct: 127 LGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQM 186

Query: 149 HREGHELNPFAFTAFLKVLVSMGW-AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGC 207
              G E N F   + +      G+ A+    V   V K G   + +VGTAL+  +   G 
Sbjct: 187 WGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGL 246

Query: 208 VEFARKVFDGL--------------FNDCFE--EALNFFSQMRAVGFKPNNFTFAFVLKA 251
           V  A+K+F+ +              ++D     E LN + +MR  G   N  TFA V  +
Sbjct: 247 VYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSS 306

Query: 252 CLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPW 311
           C  L+   +     G  ++  +E  + VA +L+ +++    +  A  +F+ M + D+I W
Sbjct: 307 CGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISW 366

Query: 312 SFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR 371
           + MI+ YA   L  +++  F  MR      N  T  S+L  C++++ L  G  IH LVV+
Sbjct: 367 NAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVK 426

Query: 372 VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIM 431
           +GL S+V + N L+ +Y++ GR E++  +F    +R+ ++WN+M+  YVQ G+    + +
Sbjct: 427 LGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKI 486

Query: 432 FSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAK 491
            +++L+       VT++S L AC++   L     VH L + A +   ++V NAL+ MY K
Sbjct: 487 LAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGK 546

Query: 492 CGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGV 551
            G + +A+ V   M   + V+WNA+I G++ +    E +K + L++++G   N +T V V
Sbjct: 547 LGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSV 606

Query: 552 LSACS-NGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQ 610
           L ACS    LL+ G      +V   G E       S++++  + G L+ +  + +G+   
Sbjct: 607 LGACSAPDDLLKHGMPIHAHIVLT-GFESDDYVKNSLITMYAKCGDLNSSNYIFDGLG-N 664

Query: 611 PSVMIWRALLGACIIH 626
            S + W A++ A   H
Sbjct: 665 KSPITWNAMVAANAHH 680



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 204/382 (53%), Gaps = 4/382 (1%)

Query: 247 FVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK 306
           F LK    + +    K+ H   +     + ++    L+++Y+K G I +AR +F+EM  +
Sbjct: 99  FPLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHR 158

Query: 307 DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL-DLGNQI 365
           +   WS M++ Y +  L  +AV LFC+M    V PN F   S++ AC+    + D G Q+
Sbjct: 159 NEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQV 218

Query: 366 HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEV 425
           H  VV+ G+L DV+V  AL+  Y   G + N+ +LF E P  N V+W +++VGY   G  
Sbjct: 219 HGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNP 278

Query: 426 GKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANAL 485
           G+ + ++ +M +E V   + T+++V  +C  L     G QV    ++  ++  V VAN+L
Sbjct: 279 GEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSL 338

Query: 486 IDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNN 545
           I M++   S+ +A  VFD MN+ + +SWNAMIS Y+ HGL  E L+ F  M+      N+
Sbjct: 339 ISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNS 398

Query: 546 LTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
            T   +LS CS+   L+ G      +V   G++  +    ++++L   AG  + A  + +
Sbjct: 399 TTLSSLLSVCSSVDNLKWGRG-IHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQ 457

Query: 606 GIPFQPSVMIWRALLGACIIHN 627
            +  +  ++ W +++ AC + +
Sbjct: 458 AMT-ERDLISWNSMM-ACYVQD 477


>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 960

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 260/820 (31%), Positives = 422/820 (51%), Gaps = 105/820 (12%)

Query: 81  QVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPER--NTISFVTTIQGYTVSSQF 138
           QV ++ +  ++F  N ++   V  +R+ DA KLFDEMP R  +++S+ T I GY+ +   
Sbjct: 64  QVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFH 123

Query: 139 VEAVGLFSTLHRE----GHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFV 194
             +   FS + R+    G   +PF+FT+ +K   S+G + L   + A V KLG      +
Sbjct: 124 SRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCI 183

Query: 195 GTALIDAFSVCGCVEFARKVFDGL---------------------------FNDCFE--- 224
             +++  +  CG V+ A  VF  +                           FN   E   
Sbjct: 184 QNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDE 243

Query: 225 -----------------EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGC 267
                            + L  F +M   GF PN  T+  VL AC     ++     H  
Sbjct: 244 VSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHAR 303

Query: 268 ALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDA 327
            L+  + +DL     L+D+Y K G +  A+R+F+ + + D I W+ +I       L  DA
Sbjct: 304 ILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDA 363

Query: 328 VELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDV 387
           + LF +MR++ V  ++F   ++L  C+  +    G  +H   ++ G+ S   V NA++ +
Sbjct: 364 LILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITM 423

Query: 388 YAKCGRMENS------------------VELFAES-------------PKRNHVTWNTMI 416
           YAKCG  + +                  +  F+ S             P+RN VTWN+M+
Sbjct: 424 YAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSML 483

Query: 417 VGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD 476
             YVQ G   + + ++  M    V    +T+++ +RACA LA ++ GMQV     K    
Sbjct: 484 STYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLS 543

Query: 477 MDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLM 536
           ++V VAN+++ MY++CG I +A+  FD ++D + +SWNAM++ ++ +GL  +V+  F+ M
Sbjct: 544 LNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDM 603

Query: 537 QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGH 596
            +   +PN++++V VLS CS+ GL+ +G+ YF SM   +GI P  EH++ MV LLGRAG 
Sbjct: 604 LKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGL 663

Query: 597 LDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNI 656
           L++A  LIEG+PF+P+  +W ALLG+C +H+++ +   +A+ +++ + E    +VLLSN+
Sbjct: 664 LEQAKDLIEGMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNM 723

Query: 657 YAMARSWEKAASKEP-----------GLSWIENQGMVHYFRAGDTSHADMN-IIRGMLEW 704
           Y+ +   +  A               G SWIE    VH F   +TSH  +  +   + E 
Sbjct: 724 YSESGELDNVADMRKLMKVKGIRTSRGCSWIEVDNRVHVFTVDETSHPQIKEVYLKLEEM 783

Query: 705 LNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRI 764
           + M      YI   S+V R       ++Y   HSEKLA AF L  +P   PI ++KNLR+
Sbjct: 784 MKMIEDTGKYITVESSVHR------SKKY---HSEKLAFAFGLLNLPSWMPIHVMKNLRV 834

Query: 765 CVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
           C DCH  IK++S +  RE+I+RD +RFHHF+DG CSC D+
Sbjct: 835 CDDCHLVIKLLSLVTSRELIMRDGYRFHHFKDGICSCKDY 874



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 119/519 (22%), Positives = 229/519 (44%), Gaps = 62/519 (11%)

Query: 63  LQSCIQND---------DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
           +++CIQN          D+  A T+   + +      LF  N ++  Y ++     A ++
Sbjct: 179 METCIQNSVVGMYVKCGDVDLAETVFFDIERP----SLFCWNSMIYGYSQMYGPYKALQI 234

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           F+ MPER+ +S+ T I  ++     V+ + +F  +  +G   N   + + L    S    
Sbjct: 235 FNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDL 294

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF--- 223
           +    + A + ++ H  +   G  LID ++ CGC++ A++VF  L       +N      
Sbjct: 295 KWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGV 354

Query: 224 ------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
                 E+AL  F+QMR      + F    +L  C G D     +  HG  +K+      
Sbjct: 355 VHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSA 414

Query: 278 YVAVALLDLYTK-------------------------------SGEISNARRIFEEMPKK 306
            V  A++ +Y K                               SG+I  AR  F+ MP++
Sbjct: 415 PVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPER 474

Query: 307 DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIH 366
           +++ W+ M++ Y Q   S + ++L+  MR   V P+  TF + ++ACA +  + LG Q+ 
Sbjct: 475 NIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVV 534

Query: 367 SLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVG 426
           +   + GL  +V V+N+++ +Y++CG ++ +   F     ++ ++WN M+  + Q G   
Sbjct: 535 THATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGI 594

Query: 427 KAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ-VHCLTVKANYDMDVVVANAL 485
           K +  F  ML+ +     ++Y SVL  C+ +  +  G      +T            + +
Sbjct: 595 KVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCM 654

Query: 486 IDMYAKCGSITDAR-LVFDMMNDWNEVSWNAMISGYSMH 523
           +D+  + G +  A+ L+  M    N   W+A++    +H
Sbjct: 655 VDLLGRAGLLEQAKDLIEGMPFKPNATVWSALLGSCRVH 693



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/439 (24%), Positives = 187/439 (42%), Gaps = 49/439 (11%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +Y + L +C    DL+    +H ++L+  + LDL   N L+++Y K   L  A ++F
Sbjct: 277 NFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVF 336

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             + E + IS+ + I G        +A+ LF+ + R    L+ F     L V     +A 
Sbjct: 337 KSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYAS 396

Query: 175 LCPCVFACVYKLGHDSNAFVG-------------------------------TALIDAFS 203
               +     K G  S+A VG                               TA+I AFS
Sbjct: 397 TGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFS 456

Query: 204 VCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAF 247
             G +  AR  FD +                 N   EE L  +  MR+ G +P+  TF  
Sbjct: 457 RSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTT 516

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
            ++AC  L  +++       A K    +++ VA +++ +Y++ G I  A+  F+ +  KD
Sbjct: 517 SIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKD 576

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
           +I W+ M+A +AQ  L I  ++ F  M +    PN  ++VSVL  C+ M  +  G     
Sbjct: 577 LISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFD 636

Query: 368 LVVRV-GLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMIVGYVQLGEV 425
            + RV G+       + ++D+  + G +E + +L    P K N   W+ ++       ++
Sbjct: 637 SMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALLGSCRVHHDL 696

Query: 426 GKAMIMFSKMLEEQVPATE 444
             A     K++E  V  +E
Sbjct: 697 RLAETAAKKLMELDVEGSE 715



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 102/450 (22%), Positives = 184/450 (40%), Gaps = 96/450 (21%)

Query: 346 FVSVLQACA-TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           F    + C+ T +   +  ++H+ ++  GL S +F+ N L+ +Y+ CG   ++ ++F E+
Sbjct: 10  FYDAFKQCSFTHKSPHIARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQET 69

Query: 405 PKRNHVTWN---------------------------------TMIVGYVQLGEVGKAMIM 431
             RN  TWN                                 TMI GY Q G   ++   
Sbjct: 70  HHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFET 129

Query: 432 FSKMLEEQVPATE----VTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALID 487
           FS M+ +     +     +++SV++AC SL      +Q+H L  K  + M+  + N+++ 
Sbjct: 130 FSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVG 189

Query: 488 MYAKCGSITDARLV-------------------------------FDMMNDWNEVSWNAM 516
           MY KCG +  A  V                               F+ M + +EVSWN +
Sbjct: 190 MYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTL 249

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           IS +S HG   + L +F  M  +G+ PN +T+  VLSAC++   L+ G A+  + +    
Sbjct: 250 ISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWG-AHLHARILRME 308

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
               +     ++ +  + G LD A ++ + +     +  W +L+   ++H       L  
Sbjct: 309 HSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHIS-WNSLITG-VVHFG-----LGE 361

Query: 637 QHILDFEPEDEATHVL----LSNIYAMARSWEKAASKEPGLSWIENQGM----------- 681
             ++ F     ++ VL    L  I  +    + A++ E    +    GM           
Sbjct: 362 DALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAII 421

Query: 682 VHYFRAGDTSHADMNI----IRGMLEWLNM 707
             Y + GDT  AD+      +R  + W  M
Sbjct: 422 TMYAKCGDTDKADLVFRLMPLRNTISWTAM 451


>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 750

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 263/767 (34%), Positives = 383/767 (49%), Gaps = 95/767 (12%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           NS SY   +   ++N     A  +  ++  K    DLF+ N++L  Y +  RL DA  LF
Sbjct: 63  NSVSYNAMISGYLRNAKFSLARDLFDKMPHK----DLFSWNLMLTGYARNRRLRDARMLF 118

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D MPE++ +S+   + GY  S    EA  +F  +  +                 S+ W  
Sbjct: 119 DSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKN----------------SISW-- 160

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMR 234
                                  L+ A+   G +E AR++F+              S+  
Sbjct: 161 ---------------------NGLLAAYVRSGRLEEARRLFE--------------SKSD 185

Query: 235 AVGFKPNNFTFAFVLKACLG-----LDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK 289
                 N     +V +  LG      D I V               DL     ++  Y +
Sbjct: 186 WELISCNCLMGGYVKRNMLGDARQLFDQIPVR--------------DLISWNTMISGYAQ 231

Query: 290 SGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSV 349
            G++S ARR+FEE P +DV  W+ M+  Y Q  +  +A  +F  M Q      + ++  +
Sbjct: 232 DGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQK----REMSYNVM 287

Query: 350 LQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNH 409
           +   A  + +D+G ++   +       ++   N ++  Y + G +  +  LF   P+R+ 
Sbjct: 288 IAGYAQYKRMDMGRELFEEMP----FPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDS 343

Query: 410 VTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCL 469
           V+W  +I GY Q G   +AM M  +M  +       T+   L ACA +AALE G QVH  
Sbjct: 344 VSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQ 403

Query: 470 TVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEV 529
            V+  Y+   +V NAL+ MY KCG I +A  VF  +   + VSWN M++GY+ HG   + 
Sbjct: 404 VVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQA 463

Query: 530 LKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVS 589
           L VF+ M   G +P+ +T VGVLSACS+ GL ++G  YF SM  +YGI P  +HY  M+ 
Sbjct: 464 LTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMID 523

Query: 590 LLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEAT 649
           LLGRAG L++A  LI  +PF+P    W ALLGA  IH N+E+G  +A+ +   EP +   
Sbjct: 524 LLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSGM 583

Query: 650 HVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNII 698
           +VLLSN+YA +  W           +    K PG SW+E Q  +H F  GD  H +   I
Sbjct: 584 YVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQNKIHTFTVGDCFHPEKGRI 643

Query: 699 RGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRI 758
              LE L++K +  GY+     VL DV E+EK+  L  HSEKLA+AF +  MP   PIR+
Sbjct: 644 YAFLEELDLKMKHEGYVSSTKLVLHDVEEEEKKHMLKYHSEKLAVAFGILTMPSGKPIRV 703

Query: 759 IKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +KNLR+C DCH AIK ISKIV R II+RD HR+HHF +G CSC D+W
Sbjct: 704 MKNLRVCEDCHNAIKHISKIVGRLIIVRDSHRYHHFSEGICSCRDYW 750



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 99/425 (23%), Positives = 172/425 (40%), Gaps = 89/425 (20%)

Query: 284 LDLYTKSGEISNARRIFEEMP-------------------------------KKDVIPWS 312
           +  + ++G    A  +F+ MP                                KD+  W+
Sbjct: 40  ISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDLFSWN 99

Query: 313 FMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL----------- 361
            M+  YA+     DA  LF  M +  V          +++    E  D+           
Sbjct: 100 LMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSIS 159

Query: 362 GNQIHSLVVRVGLLSD---VFVS---------NALMDVYAKCGRMENSVELFAESPKRNH 409
            N + +  VR G L +   +F S         N LM  Y K   + ++ +LF + P R+ 
Sbjct: 160 WNGLLAAYVRSGRLEEARRLFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDL 219

Query: 410 VTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEV-TYSSVLRACASLAALEPGMQV-H 467
           ++WNTMI GY Q G++ +A  +F     E+ P  +V T+++++ A      L+   +V  
Sbjct: 220 ISWNTMISGYAQDGDLSQARRLF-----EESPVRDVFTWTAMVYAYVQDGMLDEARRVFD 274

Query: 468 CLTVKANYDMDVVVA--------------------------NALIDMYAKCGSITDARLV 501
            +  K     +V++A                          N +I  Y + G +  AR +
Sbjct: 275 EMPQKREMSYNVMIAGYAQYKRMDMGRELFEEMPFPNIGSWNIMISGYCQNGDLAQARNL 334

Query: 502 FDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLL 561
           FDMM   + VSW A+I+GY+ +GL  E + +   M++ G   N  TF   LSAC++   L
Sbjct: 335 FDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAAL 394

Query: 562 EQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLG 621
           E G+      V   G E       ++V +  + G +D+A  + +G+  +  ++ W  +L 
Sbjct: 395 ELGKQ-VHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHK-DIVSWNTMLA 452

Query: 622 ACIIH 626
               H
Sbjct: 453 GYARH 457



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 71/168 (42%), Gaps = 10/168 (5%)

Query: 476 DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDL 535
           D   V     I  + + G    A  VFD M   N VS+NAMISGY  +   +    +FD 
Sbjct: 30  DPHTVKCTKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDK 89

Query: 536 MQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAG 595
           M  +     NL   G     +    L      F SM      E  +  + +M+S   R+G
Sbjct: 90  MPHKDLFSWNLMLTGY----ARNRRLRDARMLFDSMP-----EKDVVSWNAMLSGYVRSG 140

Query: 596 HLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFE 643
           H+D+A  + + +P + S+  W  LL A +    +E  R   +   D+E
Sbjct: 141 HVDEARDVFDRMPHKNSIS-WNGLLAAYVRSGRLEEARRLFESKSDWE 187


>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 574

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 227/572 (39%), Positives = 348/572 (60%), Gaps = 12/572 (2%)

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
           +A +L++C+    I   K  H    +     +  +A  L++LY     ++NA  +F+ + 
Sbjct: 4   YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
           K+++  W+ MI  YA       A+ L+ +MR   + P++FTF  VL+AC+ +  ++ G +
Sbjct: 64  KRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKK 123

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
           IH  V+R GL SDVFV  AL+D+YAKCG +E++ ++F +  +R+ V WN+M+  Y Q G+
Sbjct: 124 IHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQ 183

Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA 484
             +++ +   M    +  TE T+   + A A    L  G ++H  + +  ++ +  V  A
Sbjct: 184 PDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTA 243

Query: 485 LIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPN 544
           L+DMYAK GS+  AR +F+++ +   VSWNAMI+GY+MHG + E L +F  M+ +   P+
Sbjct: 244 LMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGK-VLPD 302

Query: 545 NLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLI 604
           ++TFVGVL+ACS+GGLL +G+ +F+SM++++ I P ++HYT M+ LLG  G L++A KLI
Sbjct: 303 HITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLI 362

Query: 605 EGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE 664
             +  +P   +W ALL +C IH NVE+G L+ + +++ EP+D   +V+LSN+YA A  W+
Sbjct: 363 MEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKWD 422

Query: 665 -----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAG 713
                      K   K    SWIE    VH F + DTSH     I   L+      ++AG
Sbjct: 423 GVARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLMKEAG 482

Query: 714 YIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIK 773
           Y P + +V  DV +DEK   +  HSE+LA+AF L      + + IIKNLRIC DCH AIK
Sbjct: 483 YAPQVGSVFHDVEDDEKVDMVSCHSERLAIAFGLISTSAGTKLLIIKNLRICEDCHVAIK 542

Query: 774 IISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            ISKI +REI IRDV+R+HHF+DG CSCGDFW
Sbjct: 543 FISKITEREITIRDVNRYHHFKDGVCSCGDFW 574



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 193/365 (52%), Gaps = 25/365 (6%)

Query: 181 ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFE 224
           A + ++G   N  + T L++ + +C  +  A  +FD +                +N  +E
Sbjct: 25  ARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKRNLFLWNVMIRGYAWNGPYE 84

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
            A++ + QMR  G  P+ FTF FVLKAC  L  +   K  H   +++  E D++V  AL+
Sbjct: 85  LAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALI 144

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF--VAPN 342
           D+Y K G + +AR++F+++ ++DV+ W+ M+A Y+Q     +++ L CR+  AF  + P 
Sbjct: 145 DMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLAL-CRV-MAFNGLKPT 202

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           + TFV  + A A    L  G ++H    R G  S+  V  ALMD+YAK G +  +  LF 
Sbjct: 203 EGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFE 262

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
              ++  V+WN MI GY   G   +A+ +F +M  + +P   +T+  VL AC+    L  
Sbjct: 263 LLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGKVLP-DHITFVGVLAACSHGGLLNE 321

Query: 463 GMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISG 519
           G ++H  ++ +++++   V +   +ID+   CG + +A +L+ +M  + +   W A++  
Sbjct: 322 G-KMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALLHS 380

Query: 520 YSMHG 524
             +HG
Sbjct: 381 CKIHG 385



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/390 (29%), Positives = 186/390 (47%), Gaps = 24/390 (6%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           YA+ LQSC+    ++    +H ++ + G   +      L+N+Y   N L +A  LFD + 
Sbjct: 4   YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
           +RN   +   I+GY  +  +  A+ L+  +   G   + F F   LK   ++   E    
Sbjct: 64  KRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKK 123

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND---CFEEALNFFSQ--- 232
           +   V + G +S+ FVG ALID ++ CGCVE AR+VFD +      C+   L  +SQ   
Sbjct: 124 IHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQ 183

Query: 233 ----------MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
                     M   G KP   TF   + A      +   K  HG + +  +E +  V  A
Sbjct: 184 PDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTA 243

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+D+Y KSG ++ AR +FE + +K V+ W+ MI  YA    + +A++LF  M+   V P+
Sbjct: 244 LMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGK-VLPD 302

Query: 343 QFTFVSVLQACATMEGLDLGN-QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
             TFV VL AC+    L+ G     S++    +   V     ++D+   CGR+E + +L 
Sbjct: 303 HITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLI 362

Query: 402 AE-SPKRNHVTWNTM-----IVGYVQLGEV 425
            E   + +   W  +     I G V++GE+
Sbjct: 363 MEMRVEPDAGVWGALLHSCKIHGNVEMGEL 392


>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 953

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 264/784 (33%), Positives = 410/784 (52%), Gaps = 49/784 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           ++ ++   +++C    D+   + +H  V+K G   DLF  N L++ Y     + DA KLF
Sbjct: 186 DNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLF 245

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFA-FTAFLKVLVSMGWA 173
           D MPERN +S+ + I+             +FS    +G  +   A     L V       
Sbjct: 246 DIMPERNLVSWNSMIR-------------VFSDNGDDGAFMPDVATVVTVLPVCAREREI 292

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--------------GLF 219
            +   V     KL  D    V  AL+D +S  GC+  ++ +F               G F
Sbjct: 293 GVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGF 352

Query: 220 N--DCFEEALNFFSQMRAVG--FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
           +         +   QM A     K +  T    +  C     +   K  H  +LK  +  
Sbjct: 353 SAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVY 412

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTD---LSIDAVELFC 332
           D  +A A +  Y K G +S A+R+F  +  K +  W+ +I  YAQ+    LS+DA     
Sbjct: 413 DELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDA---HL 469

Query: 333 RMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCG 392
           +M+ + + P+ FT  S+L AC+ ++ L LG ++H  ++R  L  D+FV  +++ +Y  CG
Sbjct: 470 QMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCG 529

Query: 393 RMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLR 452
            +     LF      + V+WNT+I G++Q G   +A+ +F +M+   +    ++  +V  
Sbjct: 530 ELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFG 589

Query: 453 ACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS 512
           AC+ L +L  G + H   +K   + +  +A ++IDMYAK G+IT +  VF+ + + +  S
Sbjct: 590 ACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAAS 649

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
           WNAMI GY MHG + E +K+F+ MQ+ G  P++LTF+GVL+AC++ GLL +G  Y   M 
Sbjct: 650 WNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMK 709

Query: 573 ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIG 632
           +++G++P ++HY  ++ +LGRAG LD A ++   +  +P V IW +LL  C IH N+E+G
Sbjct: 710 SSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCRIHQNLEMG 769

Query: 633 RLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGM 681
              A  +   EPE    +VLLSN+YA    W           E +  K+ G SWIE  G 
Sbjct: 770 EKVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVRQVRQRMKEMSLRKDAGCSWIELNGK 829

Query: 682 VHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKL 741
           V  F  G+        I+ +   L MK  K GY PD S+V  D+ E+EK   L  HSEKL
Sbjct: 830 VFSFVVGERFLDGFEEIKSLWSILEMKIWKMGYRPDTSSVQHDLSEEEKIEQLRGHSEKL 889

Query: 742 ALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSC 801
           A+ + L K    + +R+ KNLRICVDCH A K+ISK+++REI++RD  RFHHF  G CSC
Sbjct: 890 AITYGLIKTSEGTTLRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFNKGFCSC 949

Query: 802 GDFW 805
           GD+W
Sbjct: 950 GDYW 953



 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 131/427 (30%), Positives = 217/427 (50%), Gaps = 32/427 (7%)

Query: 190 SNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQM 233
           S+  + T +I  +++CG  + +R  FD L                 N+ + E L  F +M
Sbjct: 118 SDDVLCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKM 177

Query: 234 -RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
                  P+NFTF  V+KAC G+  + +  + HG  +KT    DL+V  AL+  Y   G 
Sbjct: 178 ISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGF 237

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           +S+A ++F+ MP+++++ W+ MI  +  +D   D          AF+ P+  T V+VL  
Sbjct: 238 VSDALKLFDIMPERNLVSWNSMIRVF--SDNGDDG---------AFM-PDVATVVTVLPV 285

Query: 353 CATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTW 412
           CA    + +G  +H   V++ L  ++ V+NALMD+Y+K G + +S  +F  +  +N V+W
Sbjct: 286 CAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSW 345

Query: 413 NTMIVGYVQLGEVGKAMIMFSKML--EEQVPATEVTYSSVLRACASLAALEPGMQVHCLT 470
           NTM+ G+   G++     +  +ML   E V A EVT  + +  C   + L    ++HC +
Sbjct: 346 NTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYS 405

Query: 471 VKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVL 530
           +K  +  D ++ANA +  YAKCGS++ A+ VF  +      SWNA+I GY+        L
Sbjct: 406 LKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSL 465

Query: 531 KVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSL 590
                M+  G  P+N T   +LSACS    L  G+     ++ N+ +E  +  Y S++SL
Sbjct: 466 DAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNW-LERDLFVYLSVLSL 524

Query: 591 LGRAGHL 597
               G L
Sbjct: 525 YIHCGEL 531



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 141/584 (24%), Positives = 259/584 (44%), Gaps = 26/584 (4%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCL--DLFATNVLLNVYVKLNRLPDATKLFDEMPER 120
           LQ+  +  D++    IH  V         D+  T ++  +Y       D+   FD +  +
Sbjct: 91  LQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRII-TMYAMCGSPDDSRSAFDALRSK 149

Query: 121 NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHEL-NPFAFTAFLKVLVSMGWAELCPCV 179
           N   +   I  Y+ +  + E + +F  +  + H L + F F   +K    +    +   V
Sbjct: 150 NLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAV 209

Query: 180 FACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND---CFEEALNFFSQMRAV 236
              V K G   + FVG AL+  +   G V  A K+FD +       +   +  FS     
Sbjct: 210 HGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNGDD 269

Query: 237 G-FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISN 295
           G F P+  T   VL  C     I V K  HG A+K   + +L V  AL+D+Y+K G I +
Sbjct: 270 GAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIID 329

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF-----VAPNQFTFVSVL 350
           ++ IF+    K+V+ W+ M+  ++      D    F  +RQ       V  ++ T ++ +
Sbjct: 330 SQMIFKLNNNKNVVSWNTMVGGFSAEG---DIHGTFDLLRQMLAGSEDVKADEVTILNAV 386

Query: 351 QACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHV 410
             C     L    ++H   ++   + D  ++NA +  YAKCG +  +  +F     +   
Sbjct: 387 PVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLN 446

Query: 411 TWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLT 470
           +WN +I GY Q  +   ++    +M    +     T  S+L AC+ L +L  G +VH   
Sbjct: 447 SWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFI 506

Query: 471 VKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVL 530
           ++   + D+ V  +++ +Y  CG +   +++FD M D + VSWN +I+G+  +G     L
Sbjct: 507 IRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERAL 566

Query: 531 KVFDLMQQRGWRPNNLTFVGVLSACS---NGGLLEQGEAY-FKSMVANYGIEPCIEHYTS 586
            +F  M   G +P  ++ + V  ACS   +  L  +  AY  K ++ +     C     S
Sbjct: 567 GLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIAC-----S 621

Query: 587 MVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
           ++ +  + G + +++K+  G+  + S   W A++    +H   +
Sbjct: 622 IIDMYAKNGAITQSSKVFNGLK-EKSAASWNAMIMGYGMHGRAK 664



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 104/210 (49%), Gaps = 14/210 (6%)

Query: 349 VLQACATMEGLDLGNQIHSLVV-RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKR 407
           +LQA    + +++G +IH LV     L SD  +   ++ +YA CG  ++S   F     +
Sbjct: 90  LLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSK 149

Query: 408 NHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE-QVPATEVTYSSVLRACASLAALEPGMQV 466
           N   WN +I  Y +     + + MF KM+ +  +     T+  V++ACA ++ +  G+ V
Sbjct: 150 NLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAV 209

Query: 467 HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLS 526
           H L VK     D+ V NAL+  Y   G ++DA  +FD+M + N VSWN+MI  +S +G  
Sbjct: 210 HGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNG-- 267

Query: 527 AEVLKVFDLMQQRGWRPNNLTFVGVLSACS 556
                         + P+  T V VL  C+
Sbjct: 268 ----------DDGAFMPDVATVVTVLPVCA 287



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 135/309 (43%), Gaps = 50/309 (16%)

Query: 38  QCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVL 97
           Q  NS   P  F+V           L +C +   L+    +H  +++     DLF    +
Sbjct: 470 QMKNSGLLPDNFTVCSL--------LSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSV 521

Query: 98  LNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNP 157
           L++Y+    L     LFD M + + +S+ T I G+  +     A+GLF  +   G  + P
Sbjct: 522 LSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYG--IQP 579

Query: 158 FAFTAFLKVLVSMGWAELCPCVF----ACVYKLGH--DSNAFVGTALIDAFSVCGCVEFA 211
              +    ++   G   L P +     A  Y L H  + NAF+  ++ID ++  G +  +
Sbjct: 580 CGIS----MMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQS 635

Query: 212 RKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKAC--- 252
            KVF+GL                 +   +EA+  F +M+  G  P++ TF  VL AC   
Sbjct: 636 SKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHS 695

Query: 253 ----LGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK-D 307
                GL  +   KS+ G       + +L     ++D+  ++G++ NA R+  EM ++ D
Sbjct: 696 GLLHEGLRYLDQMKSSFG------LKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPD 749

Query: 308 VIPWSFMIA 316
           V  W+ +++
Sbjct: 750 VGIWNSLLS 758


>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
 gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
          Length = 652

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 245/650 (37%), Positives = 359/650 (55%), Gaps = 29/650 (4%)

Query: 185 KLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALN 228
           +LG   N F+   LID ++ C   + A  VF G+                 N  F+    
Sbjct: 3   ELGWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWL 62

Query: 229 FFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYT 288
           FF  M   G  P     +  L AC     I + +S     L T  E +  V  AL+ LY 
Sbjct: 63  FFRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYG 122

Query: 289 KSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVS 348
           K G  ++A  +F  M  +DV+ WS M+A YA+     +A+ LF +M    VAPN+ T VS
Sbjct: 123 KLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVS 182

Query: 349 VLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRN 408
            L ACA++  L  G  +H  V   G+ S V V  AL+++Y KCGR+E + E F +  ++N
Sbjct: 183 GLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKN 242

Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVH- 467
            V W+ +   Y +      A+ +  +M  E +     T+ SVL ACA++AAL+ G ++H 
Sbjct: 243 VVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHE 302

Query: 468 -CLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLS 526
               +    + DV V  AL++MY+KCG++  A  +FD +   + V WN++I+  + HG +
Sbjct: 303 RIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQT 362

Query: 527 AEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTS 586
            + L++F+ M+  G +P  +TF  VL ACS+ G+L+QG  +F S + ++GI P  EH+  
Sbjct: 363 EKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGC 422

Query: 587 MVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPED 646
           MV LLGRAG +  +  L+  +PF+P  + W A LGAC  + N++    +A+++   +P  
Sbjct: 423 MVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDGAIWAAENLFQLDPRK 482

Query: 647 EATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADM 695
            A +VLLSN+YA A  W   A            KE G SWIE +  VH F +GD  H  +
Sbjct: 483 RAPYVLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRI 542

Query: 696 NIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSP 755
             I   L+ L    + AGY+PD   VL DV+++ KE  +  HSEKLA+AFAL   P  SP
Sbjct: 543 GEIHAELQRLTKLMKAAGYVPDTEMVLHDVKQEVKETMVGYHSEKLAMAFALLTTPEGSP 602

Query: 756 IRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           IR++KNLR+C DCHTA K ISK+V REI++RD +RFH FQ+G CSCGD+W
Sbjct: 603 IRVVKNLRVCNDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 652



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 205/448 (45%), Gaps = 22/448 (4%)

Query: 92  FATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHRE 151
           F  N+L+++Y K +R  DA  +F  +  +N  S+   +  +  +  F      F  +  +
Sbjct: 11  FLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGMLLQ 70

Query: 152 GHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFA 211
           G        + FL          +   +   +   G +  + V TAL+  +   G    A
Sbjct: 71  GINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDA 130

Query: 212 RKVFDGLF----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGL 255
             VF  +                 N    EAL  F QM   G  PN  T    L AC  L
Sbjct: 131 ASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASL 190

Query: 256 DTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMI 315
             +R     H        +  + V  AL++LY K G I  A   F ++ +K+V+ WS + 
Sbjct: 191 GDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAIS 250

Query: 316 ARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSL--VVRVG 373
           A YA+ D + DA+ +  RM    +APN  TFVSVL ACA +  L  G +IH    V+  G
Sbjct: 251 AAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGG 310

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
           L SDV+V  AL+++Y+KCG +  +  +F +    + V WN++I    Q G+  KA+ +F 
Sbjct: 311 LESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFE 370

Query: 434 KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM--DVVVANALIDMYAK 491
           +M  E +  T +T++SVL AC+    L+ G + H ++   ++ +  +      ++D+  +
Sbjct: 371 RMRLEGLQPTIITFTSVLFACSHAGMLDQGRK-HFVSFIGDHGIFPEAEHFGCMVDLLGR 429

Query: 492 CGSITDAR-LVFDMMNDWNEVSWNAMIS 518
            G I D+  L+  M  + + V+W A + 
Sbjct: 430 AGWIVDSEDLLLHMPFEPHPVAWMAFLG 457



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 164/370 (44%), Gaps = 20/370 (5%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L +C    ++    +I   +L  G   +      L+++Y KL    DA  +F  M  R+ 
Sbjct: 83  LSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAASVFLRMSHRDV 142

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +++   +  Y  +    EA+GLF  +  +G   N     + L    S+G       +   
Sbjct: 143 VAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQR 202

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEA 226
           V   G  S   VGTAL++ +  CG +E A + F  +                 ND   +A
Sbjct: 203 VEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDRNRDA 262

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHG--CALKTCYEMDLYVAVALL 284
           +    +M   G  PN+ TF  VL AC  +  ++  +  H     L    E D+YV  AL+
Sbjct: 263 IRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALV 322

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
           ++Y+K G ++ A  +F+++   D++ W+ +IA  AQ   +  A+ELF RMR   + P   
Sbjct: 323 NMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTII 382

Query: 345 TFVSVLQACATMEGLDLGNQ-IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
           TF SVL AC+    LD G +   S +   G+  +      ++D+  + G + +S +L   
Sbjct: 383 TFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLH 442

Query: 404 SPKRNH-VTW 412
            P   H V W
Sbjct: 443 MPFEPHPVAW 452



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 18/216 (8%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +  + L +C    DL++   +H +V  +G    +     L+N+Y K  R+  A + F
Sbjct: 176 NKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAF 235

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
            ++ E+N +++      Y  + +  +A+ +   +  EG   N   F + L    ++   +
Sbjct: 236 GQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALK 295

Query: 175 LCPCVFACVYKLGH--DSNAFVGTALIDAFSVCGCVEFARKVFDG-------LFNDCF-- 223
               +   ++ LG   +S+ +V TAL++ +S CG +  A  +FD        L+N     
Sbjct: 296 QGRRIHERIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIAT 355

Query: 224 -------EEALNFFSQMRAVGFKPNNFTFAFVLKAC 252
                  E+AL  F +MR  G +P   TF  VL AC
Sbjct: 356 NAQHGQTEKALELFERMRLEGLQPTIITFTSVLFAC 391


>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 678

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 236/596 (39%), Positives = 345/596 (57%), Gaps = 11/596 (1%)

Query: 221 DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
           D F  A++ ++ M      P++FTF+FVLKAC  L+   +    H    KT ++ D++V 
Sbjct: 83  DRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVFKTGFDCDVFVK 142

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
             ++  Y+K G + +A ++F++M  K+V+ W+ MI    +     +AV+LF  + ++ + 
Sbjct: 143 TNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLR 202

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           P+ F  V VL+ACA +  L+ G  I   +   GL  +VFV+ +L+D+Y KCG ME +  +
Sbjct: 203 PDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFV 262

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F    +++ V W+ MI GY   G   +A+ +F +M +  V          L +CASL AL
Sbjct: 263 FDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGAL 322

Query: 461 EPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY 520
           E G     L     +  + V+  +LID YAKCGS+ +A  V+ MM + + V +NA+ISG 
Sbjct: 323 ELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGL 382

Query: 521 SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPC 580
           +M+G       VF  M + G  PN  TFVG+L  C++ GL++ G  YF SM  ++ + P 
Sbjct: 383 AMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPT 442

Query: 581 IEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHIL 640
           IEHY  MV LL RAG LD+A  LI+G+P + +V++W +LLG C +H   ++     + ++
Sbjct: 443 IEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRETQLAEHVLKQLI 502

Query: 641 DFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGD 689
           + EP +   +VLLSNIY+ +R W           EK   K PG SW+E  G+VH F  GD
Sbjct: 503 ELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQKLPGYSWVEVDGVVHEFLVGD 562

Query: 690 TSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFK 749
           TSH     I   LE L    ++AGY P    VL DV E+EKE +L  HSEKLA+AFAL  
Sbjct: 563 TSHPLSQKIYEKLESLFKDLKEAGYNPTTEFVLFDVEEEEKEHFLGCHSEKLAVAFALIS 622

Query: 750 MPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
                 IR++KNLR+C DCH AIK ISK+  REI+IRD +RFH F DG CSC D+W
Sbjct: 623 TGAKYVIRVVKNLRVCGDCHEAIKHISKVTGREIVIRDNNRFHCFSDGACSCRDYW 678



 Score =  206 bits (525), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 140/513 (27%), Positives = 251/513 (48%), Gaps = 35/513 (6%)

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKL-----NRLPDATKLFDEMP-ERNTISF 125
           L+ A   HC++L+    L+L   N LL++ ++      N       +F + P   NT  +
Sbjct: 17  LKHAKLAHCRLLR----LNLHHDNDLLSIILRSTINFSNNAQYPILVFHKTPTNSNTFLY 72

Query: 126 VTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYK 185
            T I+G     +F  AV L++++H+     + F F+  LK    +    L   + + V+K
Sbjct: 73  NTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVFK 132

Query: 186 LGHDSNAFVGTALIDAFSVCGCVEFARKVFD-----------GLFNDC-----FEEALNF 229
            G D + FV T ++  +S CG +  A KVFD           G+   C     F EA++ 
Sbjct: 133 TGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDL 192

Query: 230 FSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK 289
           F  +   G +P+ F    VL+AC  L  +   +    C  +     +++VA +L+D+YTK
Sbjct: 193 FRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTK 252

Query: 290 SGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSV 349
            G +  AR +F+ M +KD++ WS MI  YA   L  +A+ELF  MR+  V P+ +  V  
Sbjct: 253 CGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGA 312

Query: 350 LQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNH 409
           L +CA++  L+LGN    L+     LS+  +  +L+D YAKCG ME ++ ++    +++ 
Sbjct: 313 LSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKDR 372

Query: 410 VTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCL 469
           V +N +I G    G+VG A  +F +M +  +P  E T+  +L  C     ++ G   +  
Sbjct: 373 VVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRH-YFN 431

Query: 470 TVKANYDMDVVVAN--ALIDMYAKCGSITDAR-LVFDMMNDWNEVSWNAMISGYSMH--- 523
           ++  ++ +   + +   ++D+ A+ G + +A  L+  M    N + W +++ G  +H   
Sbjct: 432 SMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRET 491

Query: 524 GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS 556
            L+  VLK   L++   W   +   +  + + S
Sbjct: 492 QLAEHVLK--QLIELEPWNSGHYVLLSNIYSAS 522



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/358 (32%), Positives = 190/358 (53%), Gaps = 21/358 (5%)

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG-EISNARR----IFEEMP-KKD 307
           GL  ++ AK AH C L     ++L+    LL +  +S    SN  +    +F + P   +
Sbjct: 13  GLKCLKHAKLAH-CRL---LRLNLHHDNDLLSIILRSTINFSNNAQYPILVFHKTPTNSN 68

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
              ++ MI      D   +AV L+  M +A + P+ FTF  VL+ACA +    LG  IHS
Sbjct: 69  TFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHS 128

Query: 368 LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK 427
           LV + G   DVFV   ++  Y+KCG + ++ ++F +   +N V+W  MI G ++ G+  +
Sbjct: 129 LVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFRE 188

Query: 428 AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALID 487
           A+ +F  +LE  +         VLRACA L  LE G  +     +     +V VA +L+D
Sbjct: 189 AVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVD 248

Query: 488 MYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLT 547
           MY KCGS+ +AR VFD M + + V W+AMI GY+ +GL  E +++F  M++   RP+   
Sbjct: 249 MYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYA 308

Query: 548 FVGVLSACSNGGLLE-----QGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKA 600
            VG LS+C++ G LE     +G   ++  ++N    P +   TS++    + G +++A
Sbjct: 309 MVGALSSCASLGALELGNWAKGLMNYEEFLSN----PVLG--TSLIDFYAKCGSMEEA 360



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 173/382 (45%), Gaps = 18/382 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +S +++  L++C + +     + IH  V K G   D+F    ++  Y K   L DA K+F
Sbjct: 103 DSFTFSFVLKACARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVF 162

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D+M  +N +S+   I G     +F EAV LF  L   G   + F     L+    +G  E
Sbjct: 163 DDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLE 222

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
               +  C+ + G   N FV T+L+D ++ CG +E AR VFDG+                
Sbjct: 223 SGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYA 282

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            N    EA+  F +MR V  +P+ +     L +C  L  + +   A G      +  +  
Sbjct: 283 SNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPV 342

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           +  +L+D Y K G +  A  +++ M +KD + ++ +I+  A       A  +F +M +  
Sbjct: 343 LGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFG 402

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQ-IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
           + PN+ TFV +L  C     +D G    +S+     +   +     ++D+ A+ G ++ +
Sbjct: 403 IPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEA 462

Query: 398 VELFAESP-KRNHVTWNTMIVG 418
             L    P K N + W +++ G
Sbjct: 463 HNLIKGMPMKANVIVWGSLLGG 484


>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 631

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 225/578 (38%), Positives = 341/578 (58%), Gaps = 16/578 (2%)

Query: 241 NNFTFAFVLKACLGLDTIRVAKSAHG--CALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
           N++ +A +L++C+    +   K  H   C L   Y +DL  A  L++ Y+    + NA  
Sbjct: 57  NHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDL--ATKLVNFYSVCNSLRNAHH 114

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           +F+++PK ++  W+ +I  YA       A+ L+ +M +  + P+ FT   VL+AC+ +  
Sbjct: 115 LFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALST 174

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           +  G  IH  V+R G   DVFV  AL+D+YAKCG + ++  +F +   R+ V WN+M+  
Sbjct: 175 IGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAA 234

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           Y Q G   +++ +  +M  + V  TE T  +V+ + A +A L  G ++H    +  +  +
Sbjct: 235 YAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYN 294

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
             V  ALIDMYAKCGS+  A ++F+ + +   VSWNA+I+GY+MHGL+ E L +F+ M +
Sbjct: 295 DKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMK 354

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLD 598
              +P+++TFVG L+ACS G LL++G A +  MV +  I P +EHYT MV LLG  G LD
Sbjct: 355 EA-QPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLD 413

Query: 599 KAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYA 658
           +A  LI  +   P   +W ALL +C  H NVE+  ++ + +++ EP+D   +V+L+N+YA
Sbjct: 414 EAYDLIRQMDVMPDSGVWGALLNSCKTHGNVELAEVALEKLIELEPDDSGNYVILANMYA 473

Query: 659 MARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNM 707
            +  WE           K   K    SWIE +  V+ F +GD SH +   I   L+ L  
Sbjct: 474 QSGKWEGVARLRQLMIDKGIKKNIACSWIEVKNKVYAFLSGDVSHPNSGAIYAELKRLEG 533

Query: 708 KSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVD 767
             R+AGY+PD  +V  DV EDEK   +  HSE+LA+AF L    P + + I KNLRIC D
Sbjct: 534 LMREAGYVPDTGSVFHDVEEDEKTDMVCSHSERLAIAFGLISTLPGTRLLITKNLRICED 593

Query: 768 CHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           CH AIK ISKI +REI +RDV+R+HHF+ G CSCGD+W
Sbjct: 594 CHVAIKFISKITEREITVRDVNRYHHFRHGLCSCGDYW 631



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 133/531 (25%), Positives = 231/531 (43%), Gaps = 71/531 (13%)

Query: 48  TFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRL 107
           +F  S  N + YA+ L+SCI    L+    +H ++ + G   +L     L+N Y   N L
Sbjct: 50  SFPSSPSNHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSL 109

Query: 108 PDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVL 167
            +A  LFD++P+ N   +   I+ Y  +     A+ L+  +   G + + F     LK  
Sbjct: 110 RNAHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKAC 169

Query: 168 VSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF-------- 219
            ++        +   V + G + + FVG AL+D ++ CGCV  AR VFD +         
Sbjct: 170 SALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWN 229

Query: 220 --------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT 271
                   N   +E+L+   +M A G +P   T   V+ +   +  +   +  HG   + 
Sbjct: 230 SMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRH 289

Query: 272 CYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELF 331
            ++ +  V  AL+D+Y K G +  A  +FE + +K V+ W+ +I  YA   L+++A++LF
Sbjct: 290 GFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLF 349

Query: 332 CRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR-VGLLSDVFVSNALMDVYAK 390
            RM +    P+  TFV  L AC+    LD G  +++L+VR   +   V     ++D+   
Sbjct: 350 ERMMKE-AQPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGH 408

Query: 391 CGRMENSVELFAE-SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSS 449
           CG+++ + +L  +     +   W  ++      G V  A +   K++E            
Sbjct: 409 CGQLDEAYDLIRQMDVMPDSGVWGALLNSCKTHGNVELAEVALEKLIE------------ 456

Query: 450 VLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND-- 507
                     LEP           NY   V++AN    MYA+ G       +  +M D  
Sbjct: 457 ----------LEP-------DDSGNY---VILAN----MYAQSGKWEGVARLRQLMIDKG 492

Query: 508 --------WNEVSWN--AMISGYSMH----GLSAEVLKVFDLMQQRGWRPN 544
                   W EV     A +SG   H     + AE+ ++  LM++ G+ P+
Sbjct: 493 IKKNIACSWIEVKNKVYAFLSGDVSHPNSGAIYAELKRLEGLMREAGYVPD 543



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 92/182 (50%), Gaps = 2/182 (1%)

Query: 441 PATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARL 500
           P+    Y+S+L +C S  ALEPG Q+H    +     ++ +A  L++ Y+ C S+ +A  
Sbjct: 55  PSNHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHH 114

Query: 501 VFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGL 560
           +FD +   N   WN +I  Y+ +G     + ++  M + G +P+N T   VL ACS    
Sbjct: 115 LFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALST 174

Query: 561 LEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
           + +G    + ++ + G E  +    ++V +  + G +  A  + + I  + +V+ W ++L
Sbjct: 175 IGEGRVIHERVIRS-GWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVL-WNSML 232

Query: 621 GA 622
            A
Sbjct: 233 AA 234


>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
          Length = 719

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 268/761 (35%), Positives = 402/761 (52%), Gaps = 74/761 (9%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L++CI   DL T  ++H   +K       + +N  + +Y K  RL  A K F ++ +   
Sbjct: 15  LKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDP-- 72

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
                                            N F+F A +         E  P +   
Sbjct: 73  ---------------------------------NVFSFNAIIAAYAK----ESRPLIAHQ 95

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNN 242
           ++    + +      LI A++ CG  E A              AL  FS MR +G   + 
Sbjct: 96  LFDQIPEPDLVSYNTLISAYADCG--ETA-------------PALGLFSGMREMGLDMDX 140

Query: 243 FTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEE 302
           FT + V+ AC   D + +    H  A+ + ++  + V  ALL  Y K+G++ +A+R+F  
Sbjct: 141 FTLSAVITACC--DDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYG 198

Query: 303 MPK-KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL 361
           M   +D + W+ MI  Y Q      A+ LF  M +  +  + FT  SVL A   +E L  
Sbjct: 199 MGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSG 258

Query: 362 GNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR-MENSVELFAESPKRNHVTWNTMIVGYV 420
           G Q H  +++ G   +  V + L+D+Y+KCG  M +  ++F E  + + V WNTM+ GY 
Sbjct: 259 GLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYS 318

Query: 421 QLGE-VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD- 478
           Q  E +  A+  F +M        + ++  V+ AC++L++   G Q+H L +K++   + 
Sbjct: 319 QNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNR 378

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
           + V NALI MY+KCG++ DAR +FD M + N VS N+MI+GY+ HG+  E L +F  M +
Sbjct: 379 ISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLE 438

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLD 598
           R   P ++TF+ VLSAC++ G +E+G  YF  M   + IEP  EHY+ M+ LLGRAG L 
Sbjct: 439 RQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLS 498

Query: 599 KAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYA 658
           +A  LI  +PF P  + W +LLGAC  H N+E+   +A  +L  EP + A +V+LSN+YA
Sbjct: 499 EAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYA 558

Query: 659 MARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNM 707
            A  WE+ A+           K+PG SWIE +  +H F A D+SH  +  I   LE ++ 
Sbjct: 559 SAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSG 618

Query: 708 KSRKAGYIPDLS-AVLRD--VREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRI 764
           K ++AGY+PD+  A+++D   R  EKE  L  HSEKLA+AF L       P+ ++KNLRI
Sbjct: 619 KMKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPVLVVKNLRI 678

Query: 765 CVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           C DCH AIK IS I  REI +RD HRFH F++G CSCGD+W
Sbjct: 679 CGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 198/395 (50%), Gaps = 36/395 (9%)

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR------ 298
           F  +LK C+    +   KS H   +K+      Y +   + LY+K G ++ AR+      
Sbjct: 11  FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70

Query: 299 -------------------------IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
                                    +F+++P+ D++ ++ +I+ YA    +  A+ LF  
Sbjct: 71  DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           MR+  +  + FT  +V+ AC    GL +G Q+HS+ V  G  S V V+NAL+  Y K G 
Sbjct: 131 MREMGLDMDXFTLSAVITACCDDVGL-IG-QLHSVAVSSGFDSYVSVNNALLTYYGKNGD 188

Query: 394 MENSVELF-AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLR 452
           ++++  +F      R+ V+WN+MIV Y Q  E  KA+ +F +M+   +     T +SVL 
Sbjct: 189 LDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLT 248

Query: 453 ACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKC-GSITDARLVFDMMNDWNEV 511
           A   L  L  G+Q H   +K  +  +  V + LID+Y+KC G ++D R VF+ + + + V
Sbjct: 249 AFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLV 308

Query: 512 SWNAMISGYSMH-GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKS 570
            WN M+SGYS +     + L+ F  MQ  G+RPN+ +FV V+SACSN     QG+     
Sbjct: 309 LWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSL 368

Query: 571 MVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
            + +      I    +++++  + G+L  A +L +
Sbjct: 369 ALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFD 403



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 91/216 (42%), Gaps = 36/216 (16%)

Query: 439 QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDA 498
           Q+  T   +  +L+ C +   L  G  +H L +K+        +N  I +Y+KCG +  A
Sbjct: 3   QISWTLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWA 62

Query: 499 RLVFDMMNDWNE-------------------------------VSWNAMISGYSMHGLSA 527
           R  F  ++D N                                VS+N +IS Y+  G +A
Sbjct: 63  RKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETA 122

Query: 528 EVLKVFDLMQQRGWRPNNLTFVGVLSACSNG-GLLEQGEAYFKSMVANYGIEPCIEHYTS 586
             L +F  M++ G   +  T   V++AC +  GL+ Q      S+  + G +  +    +
Sbjct: 123 PALGLFSGMREMGLDMDXFTLSAVITACCDDVGLIGQ----LHSVAVSSGFDSYVSVNNA 178

Query: 587 MVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           +++  G+ G LD A ++  G+      + W +++ A
Sbjct: 179 LLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVA 214


>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
          Length = 704

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 233/600 (38%), Positives = 360/600 (60%), Gaps = 13/600 (2%)

Query: 218 LFNDCFEEALNFFSQMRAVG-FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
           +F   + EAL  F  +   G +  ++ T+  ++ AC+GL +IR  K      + +  + D
Sbjct: 106 VFFKRYHEALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPD 165

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
            Y+   +L ++ K G + +ARR+F+EMP+K+++ W+ +I          +A  LF  M Q
Sbjct: 166 EYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQ 225

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
            F       FV++++A A +  +  G Q+HS  ++ G+  DVFV+ AL+D+Y+KCG +E+
Sbjct: 226 XFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIED 285

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           +  +F + P++  V WN++I GY   G   +A+ M+ +M +  V     T+S ++R CA 
Sbjct: 286 AQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICAR 345

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           LA+LE   Q H   V+  + +D+V   AL+D+Y+K G I DA+ VFDMM   N +SWNA+
Sbjct: 346 LASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNAL 405

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           I+GY  HG   E +++F+ M   G  PN++TF+ VLSACS  GL ++G   F+SM  ++ 
Sbjct: 406 IAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHK 465

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
           I+P   HY  M+ LLGR G LD+A  LI+  PF+P+V +W ALL AC +H N E+G+ +A
Sbjct: 466 IKPRAMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAA 525

Query: 637 QHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----KEPGL------SWIENQGMVHYF 685
           + +    PE  + +V+L NIY  +   E+AA+     K  GL      SWIE +   + F
Sbjct: 526 EKLYGMGPEKLSNYVVLLNIYNXSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGF 585

Query: 686 RAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAF 745
            +GD  HA    I   L+ L ++  K GY+P    +L DV E E ER L  HSEKLA+AF
Sbjct: 586 ISGDKCHAQSKEIYQKLDELMLEISKHGYVPQXKFLLPDVDEQE-ERVLLYHSEKLAIAF 644

Query: 746 ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            L      +P++I+++ RIC DCH+AIK+I+ + +REI++RD  RFHHF+DG CSCGD+W
Sbjct: 645 GLINTSDWTPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 191/383 (49%), Gaps = 18/383 (4%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           + +S +Y   + +CI    ++    +   ++  G   D +  N +L ++VK   + DA +
Sbjct: 128 DMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARR 187

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           LFDEMPE+N +S+ T I G   +  + EA  LF  + +   +     F   ++    +G 
Sbjct: 188 LFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGSRMFVTMIRASAGLGL 247

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------------- 218
                 + +C  K G   + FV  ALID +S CG +E A+ VFD +              
Sbjct: 248 IFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAG 307

Query: 219 --FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
              +   EEAL+ + +MR  G K +NFTF+ +++ C  L ++  AK AH   ++  + +D
Sbjct: 308 YALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLD 367

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           +    AL+DLY+K G I +A+ +F+ MP K+VI W+ +IA Y      ++AVE+F RM  
Sbjct: 368 IVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLH 427

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALM-DVYAKCGRME 395
             + PN  TF++VL AC+     D G +I   + R   +    +  A M ++  + G ++
Sbjct: 428 EGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLD 487

Query: 396 NSVELFAESPKRNHVT-WNTMIV 417
            +  L  ++P +  V  W  ++ 
Sbjct: 488 EAFALIKDAPFKPTVNMWAALLT 510



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 83/354 (23%), Positives = 143/354 (40%), Gaps = 64/354 (18%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           +H   LK G   D+F    L+++Y K   + DA  +FD+MPE+ T+ + + I GY +   
Sbjct: 254 LHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGY 313

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
             EA+ ++  +   G +++ F F+  +++   +   E      A + + G   +    TA
Sbjct: 314 SEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTA 373

Query: 198 LIDAFSVCGCVEFARKVFDGL-------FNDCFE---------EALNFFSQMRAVGFKPN 241
           L+D +S  G +E A+ VFD +       +N             EA+  F +M   G  PN
Sbjct: 374 LVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPN 433

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
           + TF  VL AC                                   + SG       IFE
Sbjct: 434 HVTFLAVLSAC-----------------------------------SYSGLSDRGWEIFE 458

Query: 302 EMPKKDVIP-----WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM 356
            M +   I      ++ MI    +  L +D  E F  ++ A   P    + ++L AC   
Sbjct: 459 SMSRDHKIKPRAMHYACMIELLGREGL-LD--EAFALIKDAPFKPTVNMWAALLTACRVH 515

Query: 357 EGLDLGNQIHSLVVRVG--LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRN 408
           +  +LG      +  +G   LS+  V   L+++Y   GR+E +  +     +R 
Sbjct: 516 KNFELGKFAAEKLYGMGPEKLSNYVV---LLNIYNXSGRLEEAAAVIQTLKRRG 566


>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
 gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 234/644 (36%), Positives = 360/644 (55%), Gaps = 36/644 (5%)

Query: 193 FVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRAV 236
           F+  +++  +  CG +  ARKVFD +                 N  F++    FS M  +
Sbjct: 46  FLENSVLKMYCKCGSLADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLEL 105

Query: 237 GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNA 296
             KPN  T+   L++ L    + + K  H  A+++    +  V  A+ ++Y K G +  A
Sbjct: 106 ETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGA 165

Query: 297 RRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM 356
             +FE+M +K+ + W+ ++  Y Q +  +DA+ LF +M    V  +++ F  VL+ACA +
Sbjct: 166 ELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGL 225

Query: 357 EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMI 416
           E L+ G QIH  +V++GL S+V V   L+D Y KC  +E++ + F    + N V+W+ +I
Sbjct: 226 EELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALI 285

Query: 417 VGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD 476
            GY Q+GE  +A+  F  +    V     TY+S+ +AC++LA    G Q H   +K++  
Sbjct: 286 TGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLV 345

Query: 477 MDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLM 536
                 +A+I MY++CG +  A  VF+ ++D + V+W A+I+GY+  G + E LK+F  M
Sbjct: 346 AYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRM 405

Query: 537 QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGH 596
           Q  G RPN +TF+ VL+ACS+ GL+ +G  Y +SM +NYG+   I+HY  MV +  RAG 
Sbjct: 406 QDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGF 465

Query: 597 LDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNI 656
           L +A +LI  +PF P  M W+ LLG C  + N+EIG L+A+++   +PED A ++L+ N+
Sbjct: 466 LQEALELIRSMPFSPDAMSWKCLLGGCWTYRNLEIGELAAENLFQLDPEDTAGYILMFNL 525

Query: 657 YAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWL 705
           YA    W++AA+           KE   SWI  +G VH F  GD  H     I   LE L
Sbjct: 526 YASFGKWKEAANVRKMMAERNLRKELSCSWITVKGKVHRFIVGDKHHPQTEEIYSKLEAL 585

Query: 706 N--MKSRKAGYI--PDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKN 761
           N  +   + G +   D+S  L      E++  L VHSE+LALAF L   P S+P+ + KN
Sbjct: 586 NDSVIKEETGLLTEEDVSNSL-----PERKEQLLVHSERLALAFGLISTPSSAPVVVFKN 640

Query: 762 LRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           LR C DCH   K +S I  REI++RD  RFHHF+ G CSC D+W
Sbjct: 641 LRACKDCHDFGKQVSLITGREIVVRDSFRFHHFKLGECSCNDYW 684



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 209/401 (52%), Gaps = 12/401 (2%)

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           M   G   +  ++  + +AC  + ++   +  H    +T      ++  ++L +Y K G 
Sbjct: 1   MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           +++AR++F+EM +++++ W+ +I+ YA+  +      +F  M +    PN  T++  L++
Sbjct: 61  LADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRS 120

Query: 353 CATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTW 412
                GL++G QIHS  +R GL S+  V+ A+ ++Y KCG +E +  +F +  ++N V W
Sbjct: 121 LLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAW 180

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
             ++VGY Q      A+ +F+KM+ E V   E  +S VL+ACA L  L  G Q+H   VK
Sbjct: 181 TGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVK 240

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
              + +V V   L+D Y KC ++  A   F+ +++ N+VSW+A+I+GY   G   E LK 
Sbjct: 241 LGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKT 300

Query: 533 FDLMQQRGWRPNNLTFVGVLSACS-----NGGLLEQGEAYFKSMVANYGIEPCIEHYTSM 587
           F+ ++ R    N+ T+  +  ACS     N G     +A   S+VA    E      ++M
Sbjct: 301 FESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGE------SAM 354

Query: 588 VSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
           +++  R G LD A ++ E I   P  + W A++       N
Sbjct: 355 ITMYSRCGRLDYATRVFESID-DPDAVAWTAIIAGYAYQGN 394



 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 127/482 (26%), Positives = 233/482 (48%), Gaps = 20/482 (4%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
            SY    ++C +   L      H Q+ +       F  N +L +Y K   L DA K+FDE
Sbjct: 11  RSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKVFDE 70

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
           M ERN +S+ T I  Y  +  F +   +FS +     + N   +  FL+ L++    E+ 
Sbjct: 71  MRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIG 130

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN---------------- 220
             + +   + G  SNA V TA+ + +  CG +E A  VF+ +                  
Sbjct: 131 KQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQA 190

Query: 221 DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
           +   +AL  F++M   G + + + F+ VLKAC GL+ +   +  HG  +K   E ++ V 
Sbjct: 191 ERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVG 250

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
             L+D Y K   + +A + FE + + + + WS +I  Y Q     +A++ F  +R   V 
Sbjct: 251 TPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVD 310

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
            N FT+ S+ QAC+ +   + G Q H+  ++  L++     +A++ +Y++CGR++ +  +
Sbjct: 311 INSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRV 370

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F      + V W  +I GY   G   +A+ +F +M +  V    VT+ +VL AC+    +
Sbjct: 371 FESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLV 430

Query: 461 EPGMQVHCLTVKANYDMDVVVA--NALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMI 517
             G Q +  ++ +NY +   +   + ++D+Y++ G + +A  L+  M    + +SW  ++
Sbjct: 431 IEGRQ-YLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLL 489

Query: 518 SG 519
            G
Sbjct: 490 GG 491



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 187/382 (48%), Gaps = 18/382 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +Y   L+S +    L+    IH   ++ G   +      + N+YVK   L  A  +F
Sbjct: 110 NGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVF 169

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           ++M E+N +++   + GYT + + ++A+ LF+ +  EG EL+ + F+  LK    +    
Sbjct: 170 EKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELN 229

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--NDC---------- 222
               +   + KLG +S   VGT L+D +  C  +E A K F+ +   ND           
Sbjct: 230 FGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYC 289

Query: 223 ----FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
               FEEAL  F  +R      N+FT+  + +AC  L        AH  A+K+      +
Sbjct: 290 QMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQH 349

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
              A++ +Y++ G +  A R+FE +   D + W+ +IA YA    + +A++LF RM+   
Sbjct: 350 GESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCG 409

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQ-IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
           V PN  TF++VL AC+    +  G Q + S+    G+ + +   + ++D+Y++ G ++ +
Sbjct: 410 VRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEA 469

Query: 398 VELFAESP-KRNHVTWNTMIVG 418
           +EL    P   + ++W  ++ G
Sbjct: 470 LELIRSMPFSPDAMSWKCLLGG 491



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 126/288 (43%), Gaps = 30/288 (10%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E + + ++  L++C   ++L     IH  ++K G   ++     L++ YVK + L  ATK
Sbjct: 209 ELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATK 268

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
            F+ + E N +S+   I GY    +F EA+  F +L     ++N F +T+  +   ++  
Sbjct: 269 AFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALAD 328

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------------- 218
                   A   K    +     +A+I  +S CG +++A +VF+ +              
Sbjct: 329 FNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAG 388

Query: 219 --FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL-------GLDTIRVAKSAHGCAL 269
             +     EAL  F +M+  G +PN  TF  VL AC        G   +    S +G A 
Sbjct: 389 YAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVAT 448

Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
                +D Y    ++D+Y+++G +  A  +   MP   D + W  ++ 
Sbjct: 449 T----IDHY--DCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLG 490


>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 740

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 240/685 (35%), Positives = 381/685 (55%), Gaps = 64/685 (9%)

Query: 185 KLGHDSNAFVGTAL--IDAFSVCGCVEFARKVFDGL--------------FNDCFEEALN 228
           + G  S+ +  + L  I A S    +E+ARKVFD +              +    +   +
Sbjct: 56  RTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYASGPDPVCS 115

Query: 229 FFSQMRAVGFK----PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
            ++ +  V  +    PN +TF F++KA   + ++ + +S HG A+K+    D++VA +L+
Sbjct: 116 IWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLI 175

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
             Y   G++ +A ++F  + +KDV+ W+ MI  + Q      A+ELF +M    V  +  
Sbjct: 176 HCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHV 235

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           T V VL ACA +  L+ G ++ S +    +  ++ ++NA++D+Y KCG +E++  LF   
Sbjct: 236 TMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAM 295

Query: 405 PKRNHVTWNTMIVGYV-------------------------------QLGEVGKAMIMFS 433
            ++++VTW TM+ GY                                Q G+  +A+++F 
Sbjct: 296 EEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFH 355

Query: 434 KM-LEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKC 492
           ++ L++ +   ++T  S L ACA + ALE G  +H    K    M+  V +ALI MY+KC
Sbjct: 356 ELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKC 415

Query: 493 GSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL 552
           G +  AR VF+ +   +   W+AMI G +MHG  +E + +F  MQ+   +PN +TF  V 
Sbjct: 416 GDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVF 475

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
            ACS+ GL+++ E+ F  M ++YGI P  +HY  +V +LGR+G+L+KA K IE +P  PS
Sbjct: 476 CACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPS 535

Query: 613 VMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA----- 667
             +W ALLGAC IH N+ +  ++   +L+ EP ++  HVLLSNIYA +  W+  +     
Sbjct: 536 TSVWGALLGACKIHANLSLAEMACTRLLELEPRNDGAHVLLSNIYAKSGKWDNVSELRKH 595

Query: 668 ------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAV 721
                  KEPG S IE  GM+H F +GD +H     + G L  +  K +  GY P++S V
Sbjct: 596 MRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEMSHV 655

Query: 722 LRDVREDE-KERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQ 780
           L+ + E+E KE+ L +HSEKLA+ + L        IR+IKNLR+C DCH   K+IS++  
Sbjct: 656 LQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKAIRVIKNLRMCGDCHAVAKLISQLYN 715

Query: 781 REIIIRDVHRFHHFQDGCCSCGDFW 805
           REII+RD +RFHHF++G CSC DFW
Sbjct: 716 REIIVRDRYRFHHFRNGQCSCNDFW 740



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 126/510 (24%), Positives = 223/510 (43%), Gaps = 60/510 (11%)

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYV--KLNRLPDATKLFDEMPERNTISFVTTI 129
           L+     H  +++ G   D ++ + L  +        L  A K+FDE+P+ N+ ++ T I
Sbjct: 44  LRQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLI 103

Query: 130 QGYTVSSQFVEAVGLFSTLHREGHELNP--FAFTAFLKVLVSMGWAELCPCVFACVYKLG 187
           + Y      V ++  F  +     +  P  + F   +K    +    L   +     K  
Sbjct: 104 RAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSA 163

Query: 188 HDSNAFVGTALIDAFSVCGCVEFARKVF-----------DGLFNDCFE-----EALNFFS 231
             S+ FV  +LI  +  CG ++ A KVF           + + N   +     +AL  F 
Sbjct: 164 VGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFK 223

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
           +M +   K ++ T   VL AC  +  +   +       +    ++L +A A+LD+YTK G
Sbjct: 224 KMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCG 283

Query: 292 EISNARRIFE-------------------------------EMPKKDVIPWSFMIARYAQ 320
            I +A+R+F+                                MPKKD++ W+ +I+ Y Q
Sbjct: 284 SIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQ 343

Query: 321 TDLSIDAVELFCRMR-QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVF 379
                +A+ +F  ++ Q  +  NQ T VS L ACA +  L+LG  IHS + + G+  + +
Sbjct: 344 NGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFY 403

Query: 380 VSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ 439
           V++AL+ +Y+KCG +E + E+F    KR+   W+ MI G    G   +A+ MF KM E  
Sbjct: 404 VTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEAN 463

Query: 440 VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA----LIDMYAKCGSI 495
           V    VT+++V  AC+    ++   +   L  K      +V  +     ++D+  + G +
Sbjct: 464 VKPNGVTFTNVFCACSHTGLVD---EAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYL 520

Query: 496 TDARLVFDMMNDWNEVS-WNAMISGYSMHG 524
             A    + M      S W A++    +H 
Sbjct: 521 EKAVKFIEAMPIPPSTSVWGALLGACKIHA 550



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 154/311 (49%), Gaps = 23/311 (7%)

Query: 338 FVAPNQFTF--------VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYA 389
           F  PNQ T         +S++  C+++  L    Q H+ ++R G+ SD + ++ L  + A
Sbjct: 18  FSNPNQPTTNNERSRHTISLIDRCSSLRQL---KQTHAHMIRTGMFSDPYSASKLFAIAA 74

Query: 390 --KCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML--EEQVPATEV 445
                 +E + ++F E P+ N  TWNT+I  Y    +   ++  F  M+  E Q    + 
Sbjct: 75  LSSFASLEYARKVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKY 134

Query: 446 TYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMM 505
           T+  +++A A +++L  G  +H + +K+    DV VAN+LI  Y  CG +  A  VF  +
Sbjct: 135 TFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTI 194

Query: 506 NDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE 565
            + + VSWN+MI+G+   G   + L++F  M+    + +++T VGVLSAC+    LE G 
Sbjct: 195 KEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGR 254

Query: 566 ---AYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
              +Y +    N  +        +M+ +  + G ++ A +L + +  + +V  W  +L  
Sbjct: 255 RVCSYIEENRVNVNLTLA----NAMLDMYTKCGSIEDAKRLFDAMEEKDNV-TWTTMLDG 309

Query: 623 CIIHNNVEIGR 633
             I  + E  R
Sbjct: 310 YAISEDYEAAR 320



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/400 (21%), Positives = 168/400 (42%), Gaps = 49/400 (12%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N +++   +++  +   L    ++H   +K     D+F  N L++ Y     L  A K+F
Sbjct: 132 NKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVF 191

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             + E++ +S+ + I G+       +A+ LF  +  E  + +       L     +   E
Sbjct: 192 TTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLE 251

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------- 218
               V + + +   + N  +  A++D ++ CG +E A+++FD +                
Sbjct: 252 FGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYA 311

Query: 219 FNDCFE-------------------------------EALNFFSQMR-AVGFKPNNFTFA 246
            ++ +E                               EAL  F +++     K N  T  
Sbjct: 312 ISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLV 371

Query: 247 FVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK 306
             L AC  +  + + +  H    K   +M+ YV  AL+ +Y+K G++  AR +F  + K+
Sbjct: 372 STLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKR 431

Query: 307 DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI- 365
           DV  WS MI   A      +AV++F +M++A V PN  TF +V  AC+    +D    + 
Sbjct: 432 DVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLF 491

Query: 366 HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           + +    G++ +      ++DV  + G +E +V+     P
Sbjct: 492 YKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMP 531



 Score = 47.4 bits (111), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 54/251 (21%), Positives = 100/251 (39%), Gaps = 18/251 (7%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           + N  +  ++L +C Q   L+    IH  + K G  ++ + T+ L+++Y K   L  A +
Sbjct: 364 KLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKARE 423

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +F+ + +R+   +   I G  +     EAV +F  +     + N   FT         G 
Sbjct: 424 VFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGL 483

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQ 232
            +    +F   YK+     +  G    D    C      R  +        E+A+ F   
Sbjct: 484 VDEAESLF---YKM----ESSYGIVPEDKHYACIVDVLGRSGY-------LEKAVKF--- 526

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           + A+   P+   +  +L AC     + +A+ A    L+     D    V L ++Y KSG+
Sbjct: 527 IEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRND-GAHVLLSNIYAKSGK 585

Query: 293 ISNARRIFEEM 303
             N   + + M
Sbjct: 586 WDNVSELRKHM 596


>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
 gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
 gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
 gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
 gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 882

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 252/779 (32%), Positives = 424/779 (54%), Gaps = 29/779 (3%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           + +++ + +++C    D +    ++ Q+L  G   DLF  N L+++Y ++  L  A ++F
Sbjct: 105 DKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVF 164

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           DEMP R+ +S+ + I GY+    + EA+ ++  L       + F  ++ L    ++   +
Sbjct: 165 DEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVK 224

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FN------- 220
               +     K G +S   V   L+  +        AR+VFD +       +N       
Sbjct: 225 QGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYL 284

Query: 221 --DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
             +  EE++  F +     FKP+  T + VL+AC  L  + +AK  +   LK  + ++  
Sbjct: 285 KLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLEST 343

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V   L+D+Y K G++  AR +F  M  KD + W+ +I+ Y Q+   ++A++LF  M    
Sbjct: 344 VRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIME 403

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
              +  T++ ++     +  L  G  +HS  ++ G+  D+ VSNAL+D+YAKCG + +S+
Sbjct: 404 EQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSL 463

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
           ++F+     + VTWNT+I   V+ G+    + + ++M + +V     T+   L  CASLA
Sbjct: 464 KIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLA 523

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           A   G ++HC  ++  Y+ ++ + NALI+MY+KCG + ++  VF+ M+  + V+W  MI 
Sbjct: 524 AKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIY 583

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
            Y M+G   + L+ F  M++ G  P+++ F+ ++ ACS+ GL+++G A F+ M  +Y I+
Sbjct: 584 AYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKID 643

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P IEHY  +V LL R+  + KA + I+ +P +P   IW ++L AC    ++E     ++ 
Sbjct: 644 PMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRR 703

Query: 639 ILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRA 687
           I++  P+D    +L SN YA  R W+K +           +K PG SWIE    VH F +
Sbjct: 704 IIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSS 763

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDV-REDEKERYLWVHSEKLALAFA 746
           GD S      I   LE L     K GYIPD   V +++  E+EK R +  HSE+LA+AF 
Sbjct: 764 GDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFG 823

Query: 747 LFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           L    P +P++++KNLR+C DCH   K+ISKIV REI++RD +RFH F+DG CSC D W
Sbjct: 824 LLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 153/571 (26%), Positives = 287/571 (50%), Gaps = 20/571 (3%)

Query: 69  NDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM-PERNTISFVT 127
           + +L     IH  V+  G     F +  L++ Y        +  +F  + P +N   + +
Sbjct: 17  SSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNS 76

Query: 128 TIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLG 187
            I+ ++ +  F EA+  +  L       + + F + +K    +  AE+   V+  +  +G
Sbjct: 77  IIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMG 136

Query: 188 HDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFS 231
            +S+ FVG AL+D +S  G +  AR+VFD +                 +  +EEAL  + 
Sbjct: 137 FESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYH 196

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
           +++     P++FT + VL A   L  ++  +  HG ALK+     + V   L+ +Y K  
Sbjct: 197 ELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFR 256

Query: 292 EISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQ 351
             ++ARR+F+EM  +D + ++ MI  Y + ++  ++V +F      F  P+  T  SVL+
Sbjct: 257 RPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQF-KPDLLTVSSVLR 315

Query: 352 ACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
           AC  +  L L   I++ +++ G + +  V N L+DVYAKCG M  + ++F     ++ V+
Sbjct: 316 ACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVS 375

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
           WN++I GY+Q G++ +AM +F  M+  +  A  +TY  ++     LA L+ G  +H   +
Sbjct: 376 WNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGI 435

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
           K+   +D+ V+NALIDMYAKCG + D+  +F  M   + V+WN +IS     G  A  L+
Sbjct: 436 KSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQ 495

Query: 532 VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLL 591
           V   M++    P+  TF+  L  C++      G+     ++  +G E  ++   +++ + 
Sbjct: 496 VTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLL-RFGYESELQIGNALIEMY 554

Query: 592 GRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
            + G L+ ++++ E +  +  V+ W  ++ A
Sbjct: 555 SKCGCLENSSRVFERMS-RRDVVTWTGMIYA 584



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 143/473 (30%), Positives = 253/473 (53%), Gaps = 24/473 (5%)

Query: 179 VFACVYKLGHDSNAFVGTALIDAFS----------VCGCVEFARKVF--DGLF-----ND 221
           + A V  LG DS+ F    LID +S          V   V  A+ V+  + +      N 
Sbjct: 26  IHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNG 85

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
            F EAL F+ ++R     P+ +TF  V+KAC GL    +    +   L   +E DL+V  
Sbjct: 86  LFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGN 145

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           AL+D+Y++ G ++ AR++F+EMP +D++ W+ +I+ Y+      +A+E++  ++ +++ P
Sbjct: 146 ALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVP 205

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           + FT  SVL A   +  +  G  +H   ++ G+ S V V+N L+ +Y K  R  ++  +F
Sbjct: 206 DSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVF 265

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
            E   R+ V++NTMI GY++L  V +++ MF + L++  P   +T SSVLRAC  L  L 
Sbjct: 266 DEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDL-LTVSSVLRACGHLRDLS 324

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
               ++   +KA + ++  V N LID+YAKCG +  AR VF+ M   + VSWN++ISGY 
Sbjct: 325 LAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYI 384

Query: 522 MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
             G   E +K+F +M     + +++T++ ++S  +    L+ G+    + + + GI  CI
Sbjct: 385 QSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKS-GI--CI 441

Query: 582 EHYTS--MVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIG 632
           +   S  ++ +  + G +  + K+   +    +V  W  ++ AC+   +   G
Sbjct: 442 DLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTV-TWNTVISACVRFGDFATG 493



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 219/413 (53%), Gaps = 7/413 (1%)

Query: 247 FVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM-PK 305
           F+ +A      +   +  H   +    +   + +  L+D Y+   E +++  +F  + P 
Sbjct: 9   FISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPA 68

Query: 306 KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
           K+V  W+ +I  +++  L  +A+E + ++R++ V+P+++TF SV++ACA +   ++G+ +
Sbjct: 69  KNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLV 128

Query: 366 HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEV 425
           +  ++ +G  SD+FV NAL+D+Y++ G +  + ++F E P R+ V+WN++I GY   G  
Sbjct: 129 YEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYY 188

Query: 426 GKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANAL 485
            +A+ ++ ++    +     T SSVL A  +L  ++ G  +H   +K+  +  VVV N L
Sbjct: 189 EEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGL 248

Query: 486 IDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNN 545
           + MY K    TDAR VFD M+  + VS+N MI GY    +  E +++F L     ++P+ 
Sbjct: 249 VAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF-LENLDQFKPDL 307

Query: 546 LTFVGVLSACSNGGLLEQGEAYFKSMV-ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLI 604
           LT   VL AC +   L   +  +  M+ A + +E  + +   ++ +  + G +  A  + 
Sbjct: 308 LTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNI--LIDVYAKCGDMITARDVF 365

Query: 605 EGIPFQPSVMIWRALLGACIIHNNV-EIGRLSAQHILDFEPEDEATHVLLSNI 656
             +  + +V  W +++   I   ++ E  +L    ++  E  D  T+++L ++
Sbjct: 366 NSMECKDTVS-WNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISV 417



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 88/189 (46%), Gaps = 3/189 (1%)

Query: 443 TEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVF 502
           T V+   + RA +S + L    ++H L +    D     +  LID Y+       +  VF
Sbjct: 3   TRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVF 62

Query: 503 DMMNDWNEVS-WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLL 561
             ++    V  WN++I  +S +GL  E L+ +  +++    P+  TF  V+ AC+     
Sbjct: 63  RRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDA 122

Query: 562 EQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLG 621
           E G+  ++ ++ + G E  +    ++V +  R G L +A ++ + +P +  ++ W +L+ 
Sbjct: 123 EMGDLVYEQIL-DMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR-DLVSWNSLIS 180

Query: 622 ACIIHNNVE 630
               H   E
Sbjct: 181 GYSSHGYYE 189


>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 632

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 234/554 (42%), Positives = 329/554 (59%), Gaps = 44/554 (7%)

Query: 296 ARRIFE--EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
           A++IF+  E  K +   W+  +   A+ D  IDA+ LF R+RQ  V P+ FT  SVL+AC
Sbjct: 79  AQQIFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRAC 138

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM------------------- 394
             +  L  G  +H +V +VG  S++++ N ++ +YA CG M                   
Sbjct: 139 LNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWN 198

Query: 395 ------------ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPA 442
                       E + +LF+  P+RN  +W +MI GYVQ G+  +A+ +F+KM E  V  
Sbjct: 199 IMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKC 258

Query: 443 TEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVF 502
            EVT  +VL ACA L AL+ GM++H  + +  +  +V ++N LIDMY KCG + +A  VF
Sbjct: 259 NEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVF 318

Query: 503 DMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLE 562
           + M +   VSW+AMI G +MHG + E L++F  M Q G  PN +TF+G+L ACS+ GL+ 
Sbjct: 319 EEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLIS 378

Query: 563 QGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           +G  +F SM  +YGI P IEHY  MV LL RAG L +A + I  +P +P+ ++W ALLGA
Sbjct: 379 EGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGA 438

Query: 623 CIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEP 671
           C +H NVE+   + +H+L+ +P ++  +V+LSNIYA A  WE  A            K P
Sbjct: 439 CRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTP 498

Query: 672 GLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKE 731
           G S I   G+VH F AG+ SH D   I    E L  + R  GY+P+ S VL D+ E EK 
Sbjct: 499 GWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKV 558

Query: 732 RYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRF 791
           +++  HSEKLAL F L   P  +PIRI+KNLRIC DCH+A K+IS IV REI++RD +RF
Sbjct: 559 KFVSRHSEKLALVFGLMNTPAETPIRIMKNLRICEDCHSAFKLISAIVNREIVVRDRNRF 618

Query: 792 HHFQDGCCSCGDFW 805
           H F D  CSC D+W
Sbjct: 619 HCFNDNSCSCRDYW 632



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 167/333 (50%), Gaps = 35/333 (10%)

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           +A+  F ++R     P+ FT + VL+ACL L  +   +  HG   K  +  +LY+   ++
Sbjct: 111 DAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIV 170

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIAR--------------------------- 317
            LY   GE+  AR +FE+MP++DV+ W+ MIA+                           
Sbjct: 171 HLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTS 230

Query: 318 ----YAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
               Y Q   + +A+ LF +M +A V  N+ T V+VL ACA +  LDLG +IH    R G
Sbjct: 231 MIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHG 290

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
              +V +SN L+D+Y KCG +E + ++F E  +R  V+W+ MI G    G   +A+ +FS
Sbjct: 291 FKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFS 350

Query: 434 KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAK 491
            M +  +    VT+  +L AC+ +  +  G +    ++  +Y +   + +   ++D+ ++
Sbjct: 351 DMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFA-SMTRDYGIIPQIEHYGCMVDLLSR 409

Query: 492 CGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
            G + +A   + +M    N V W A++    +H
Sbjct: 410 AGLLHEAHEFILNMPMKPNGVVWGALLGACRVH 442



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 85/373 (22%), Positives = 158/373 (42%), Gaps = 64/373 (17%)

Query: 46  PITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLN 105
           P TF+ S        + L++C+   DL     +H  V K G   +L+  N+++++Y    
Sbjct: 126 PDTFTCS--------SVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCG 177

Query: 106 RLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLK 165
            + +A  LF++MP+R+ +++   I           A  LFS +                 
Sbjct: 178 EMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMP---------------- 221

Query: 166 VLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEE 225
                                  + N    T++I  +  CG  +               E
Sbjct: 222 -----------------------ERNVRSWTSMIAGYVQCGKAK---------------E 243

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           A++ F++M   G K N  T   VL AC  L  + +    H  + +  ++ ++ ++  L+D
Sbjct: 244 AIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLID 303

Query: 286 LYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFT 345
           +Y K G +  A ++FEEM ++ V+ WS MI   A    + +A+ LF  M Q  + PN  T
Sbjct: 304 MYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVT 363

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVR-VGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           F+ +L AC+ M  +  G +  + + R  G++  +     ++D+ ++ G +  + E     
Sbjct: 364 FIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNM 423

Query: 405 P-KRNHVTWNTMI 416
           P K N V W  ++
Sbjct: 424 PMKPNGVVWGALL 436



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 26/258 (10%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +    L +C     L   M IH    + G   ++  +N L+++YVK   L +A K+F
Sbjct: 259 NEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVF 318

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           +EM ER  +S+   I G  +  +  EA+ LFS + + G E N   F   L     MG   
Sbjct: 319 EEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLIS 378

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGC-VEFARKVFDGLFNDCFEEALNFFSQM 233
                FA + +            +I      GC V+   +   GL ++  E  LN     
Sbjct: 379 EGRRFFASMTR---------DYGIIPQIEHYGCMVDLLSRA--GLLHEAHEFILN----- 422

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY---VAVALLDLYTKS 290
             +  KPN   +  +L AC     + +A+     A+K   E+D       V L ++Y ++
Sbjct: 423 --MPMKPNGVVWGALLGACRVHKNVEMAEE----AIKHLLELDPLNDGYYVVLSNIYAEA 476

Query: 291 GEISNARRIFEEMPKKDV 308
           G   +  R+ + M  + V
Sbjct: 477 GRWEDTARVRKFMKDRQV 494


>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
          Length = 672

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 242/627 (38%), Positives = 363/627 (57%), Gaps = 50/627 (7%)

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           AL  +  M ++G  PN+++F F+LK+C     +   +  HG  LK  Y++D+YV  +L+ 
Sbjct: 49  ALKLYVCMISLGLLPNSYSFPFLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLIS 108

Query: 286 LYTKSGE-------------------------------ISNARRIFEEMPKKDVIPWSFM 314
           +Y ++G                                I+NAR++F+E+  KDV+ W+ M
Sbjct: 109 MYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAM 168

Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL 374
           I+ Y +T    +A+EL+  M +  V P++ T V+V+ ACA    ++LG Q+HS +   G 
Sbjct: 169 ISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGF 228

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
            S++ + N L+D+Y+KCG +E +  LF    K++ ++WNT+I G+  +    +A+++F +
Sbjct: 229 GSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQE 288

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV-----VANALIDMY 489
           ML       +VT  SVL ACA L A++ G  +H   V  N  +  V     +  +LIDMY
Sbjct: 289 MLRSGESPNDVTMLSVLPACAHLGAIDIGRWIH---VYINKRLKGVTNASSLLTSLIDMY 345

Query: 490 AKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFV 549
           AKCG I  A+ VFD M   +  SWNAMI G++MHG +     +F  M++ G  P+++TFV
Sbjct: 346 AKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFV 405

Query: 550 GVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF 609
           G+LSACS+ G+L+ G   F+SM  +Y I P +EHY  M+ LLG  G   +A ++I  +P 
Sbjct: 406 GLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPM 465

Query: 610 QPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-- 667
           +P  +IW +LL AC +HNNVE+G   AQ+++  EPE+  ++VLLSNIYA A  W++ A  
Sbjct: 466 EPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKI 525

Query: 668 ---------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDL 718
                     K PG S IE   +VH F  GD  H     I  MLE + M   + G++PD 
Sbjct: 526 RTLLNDKGIKKAPGCSSIEIDSVVHEFIIGDKFHPRNREIYRMLEEMEMLMEETGFVPDT 585

Query: 719 SAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKI 778
           S VL+++ E+ KE  L  HSEKLA+AF L    P + + I+KNLR+C +CH A K+ISKI
Sbjct: 586 SEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKI 645

Query: 779 VQREIIIRDVHRFHHFQDGCCSCGDFW 805
            +REII RD  R H  +DG  SC D+W
Sbjct: 646 YKREIIARDRTRLHLLKDGVWSCHDYW 672



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 190/390 (48%), Gaps = 39/390 (10%)

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           +S A  IFE + + +++ W+ M   +A    S+ A++L+  M    + PN ++F  +L++
Sbjct: 15  LSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKS 74

Query: 353 CATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME----------------- 395
           CA  + L  G QIH  V+++G   D++V+ +L+ +YA+ GR+E                 
Sbjct: 75  CAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSY 134

Query: 396 --------------NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVP 441
                         N+ +LF E   ++ V+WN MI GYV+     +A+ ++  M++  V 
Sbjct: 135 TALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVK 194

Query: 442 ATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLV 501
             E T  +V+ ACA   ++E G Q+H       +  ++ + N LID+Y+KCG +  A  +
Sbjct: 195 PDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGL 254

Query: 502 FDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLL 561
           F  +   + +SWN +I G++   L  E L +F  M + G  PN++T + VL AC++ G +
Sbjct: 255 FQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAI 314

Query: 562 EQGE---AYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRA 618
           + G     Y    +   G+       TS++ +  + G ++ A ++ + +    S+  W A
Sbjct: 315 DIGRWIHVYINKRLK--GVTNASSLLTSLIDMYAKCGDIEAAKQVFDSM-LTRSLSSWNA 371

Query: 619 LLGACIIHN--NVEIGRLSAQHILDFEPED 646
           ++    +H   N      S       +P+D
Sbjct: 372 MIFGFAMHGKANAAFDLFSKMRKNGIDPDD 401


>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
 gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
          Length = 802

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 256/763 (33%), Positives = 384/763 (50%), Gaps = 100/763 (13%)

Query: 93  ATNVLLNVYVKLNRLPDATKLFDEMPE--RNTISFVTTIQGYTVSSQFVEAVGLFSTLHR 150
           A   L+  Y    RLP A   FD +P+  R+T+     I  Y  +S    AV +F +L  
Sbjct: 90  AATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLA 149

Query: 151 EGHELNP--FAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCV 208
            G  L P  ++FTA L                      GH  N           SV  C 
Sbjct: 150 SG-SLRPDDYSFTALLSAA-------------------GHLPN----------ISVRHCA 179

Query: 209 EFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCA 268
           +    V                          +N   A  +K C  L+  R A+      
Sbjct: 180 QLQCSVLKSGAGGVLSV---------------SNALVALYMK-CEALEATRDARKV---- 219

Query: 269 LKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAV 328
           L    + D      ++  Y + G++  AR +FEE+  K  + W+ MI+ Y  + + ++A 
Sbjct: 220 LDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAF 279

Query: 329 ELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL----LSDVFVSNAL 384
           ELF RM    V  ++FTF SVL ACA       G  +H  + R+       + + V+NAL
Sbjct: 280 ELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNAL 339

Query: 385 MDVYAKCGR-------------------------------MENSVELFAESPKRNHVTWN 413
           + +Y+KCG                                ++ +VE+F E P +N ++W 
Sbjct: 340 VTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWM 399

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
            M+ GYV  G    A+ +F++M  E V   + TY+  + AC  L +L+ G Q+H   V+ 
Sbjct: 400 VMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQL 459

Query: 474 NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVF 533
            ++      NALI MYA+CG++ +A L+F +M + + VSWNAMIS    HG   E L++F
Sbjct: 460 GFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELF 519

Query: 534 DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGR 593
           D M   G  P+ ++F+ VL+AC++ GL+++G  YF+SM  ++GI P  +HYT ++ LLGR
Sbjct: 520 DRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGR 579

Query: 594 AGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLL 653
           AG + +A  LI+ +PF+P+  IW A+L  C    ++E+G  +A  +    P+ + T++LL
Sbjct: 580 AGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILL 639

Query: 654 SNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGML 702
           SN Y+ A  W  AA            KEPG SWIE    VH F  GDT H + + +   L
Sbjct: 640 SNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFVVGDTKHPEAHKVYKFL 699

Query: 703 EWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNL 762
           E +  + RK GY+PD   VL D+   +KE  L+ HSE+LA+ F L K+PP + + ++KNL
Sbjct: 700 EMVGARMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLKLPPGATVTVLKNL 759

Query: 763 RICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           RIC DCH  +  +SK V REI++RDV RFHHF+DG CSCG++W
Sbjct: 760 RICDDCHAVMMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 144/637 (22%), Positives = 243/637 (38%), Gaps = 152/637 (23%)

Query: 17  HQSKINAWLRGLSAQAALSTQQC--SNSTTTPITFSVSEFNS---HSYATSLQSCIQNDD 71
           H + I+A+ R   A  A++  +   ++ +  P  +S +   S   H    S++ C Q   
Sbjct: 124 HNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISVRHCAQ--- 180

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLP---DATKLFDEMPERNTISFVTT 128
                 + C VLK G    L  +N L+ +Y+K   L    DA K+ DEMP+++ +++ T 
Sbjct: 181 ------LQCSVLKSGAGGVLSVSNALVALYMKCEALEATRDARKVLDEMPDKDALTWTTM 234

Query: 129 -------------------------------IQGYTVSSQFVEAVGLFSTLHREGHELNP 157
                                          I GY  S   VEA  LF  +  E   L+ 
Sbjct: 235 VVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDE 294

Query: 158 FAFTAFLKVLVSMGWAELCPCVFACVYKLG----HDSNAFVGTALIDAFSVCGCVEFARK 213
           F FT+ L    + G+      V   + +L      ++   V  AL+  +S CG +  AR+
Sbjct: 295 FTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARR 354

Query: 214 VFDGLFN-----------------------DCFEE------------------------A 226
           +FD + +                       + FEE                        A
Sbjct: 355 IFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDA 414

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           L  F++MRA   KP ++T+A  + AC  L +++  K  HG  ++  +E       AL+ +
Sbjct: 415 LKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITM 474

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y + G +  A  +F  MP  D + W+ MI+   Q     +A+ELF RM    + P++ +F
Sbjct: 475 YARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISF 534

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
           ++VL AC     +D G Q                              E+    F   P 
Sbjct: 535 LTVLTACNHSGLVDEGFQY----------------------------FESMKRDFGIIPG 566

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
            +H T    ++G  + G +G+A  +   M  E  P+    + ++L  C +   +E G   
Sbjct: 567 EDHYTRLIDLLG--RAGRIGEARDLIKTMPFEPTPS---IWEAILSGCRTSGDMELGAHA 621

Query: 467 --HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND----------WNEVS-- 512
                 +   +D   ++   L + Y+  G   DA  V  +M D          W E    
Sbjct: 622 ADQLFKMTPQHDGTYIL---LSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEAGNK 678

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFV 549
            +  + G + H    E  KV+  ++  G R   L +V
Sbjct: 679 VHVFVVGDTKH---PEAHKVYKFLEMVGARMRKLGYV 712


>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 620

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 231/603 (38%), Positives = 348/603 (57%), Gaps = 19/603 (3%)

Query: 219 FNDCFEEALNFFSQMRAVGFKPN---NFTFAFVLKACLGLDTIRVAKSAHG--CALKTCY 273
           F+  F  +L          F P    ++ +  +L++C+    +   K  H     L   Y
Sbjct: 21  FSQSFYHSLATHQTASVDSFPPQPTTHYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAY 80

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
             DL  A  L+ LY  S  + NAR +F+++PK+++  W+ +I  YA      +A+ L+ +
Sbjct: 81  NQDL--ATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHK 138

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           M    + P+ FT   VL+AC+ +  +  G  IH  V++ G   D+FV  AL+D+YAKCG 
Sbjct: 139 MLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGC 198

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           + ++  +F +   R+ V WN+M+  Y Q G   +++ +  +M    V  TE T  +V+ +
Sbjct: 199 VMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISS 258

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
            A +A L  G ++H    +  +  +  V  ALIDMYAKCGS+  A  +F+ + +   VSW
Sbjct: 259 SADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSW 318

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA 573
           NA+I+GY+MHGL+   L +FD M++   RP+++TFVGVL+ACS G LL++G A +  MV 
Sbjct: 319 NAIITGYAMHGLAVGALDLFDKMRKED-RPDHITFVGVLAACSRGRLLDEGRALYNLMVR 377

Query: 574 NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGR 633
           +YGI P ++HYT M+ LLG  G LD+A  LI  +  +P   +W ALL +C IH NVE+  
Sbjct: 378 DYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAE 437

Query: 634 LSAQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMV 682
           L+ + +++ EP+D   +V+L+N+YA +  WE           K   K    SWIE +  V
Sbjct: 438 LALEKLIELEPDDSGNYVILANMYAQSGKWEGVEKLRQVMIDKRIKKNIACSWIEVKNKV 497

Query: 683 HYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLA 742
           + F AGD SH++ + I   L+ L     +AGY PD  +V  DV EDEK   +  HSE+LA
Sbjct: 498 YAFLAGDVSHSNSDAIYAELKRLEGLMHEAGYAPDTGSVFHDVEEDEKTSMVCSHSERLA 557

Query: 743 LAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCG 802
           +AF L    P + + I KNLRIC DCH AIK ISKI++REI +RDV+R+H F+ G CSCG
Sbjct: 558 IAFGLISTSPGTRLLITKNLRICEDCHVAIKFISKIMEREITVRDVNRYHSFKHGMCSCG 617

Query: 803 DFW 805
           D W
Sbjct: 618 DHW 620



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 146/570 (25%), Positives = 248/570 (43%), Gaps = 76/570 (13%)

Query: 10  FSCKQLTHQSKI-NAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQ 68
           +S K+  H S I N +    S   +L+T Q    T +  +F       + Y + LQSCI 
Sbjct: 4   YSIKKTQHTSFIFNLFPFSQSFYHSLATHQ----TASVDSFPPQPTTHYGYTSLLQSCID 59

Query: 69  NDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTT 128
           +  L     +H Q    G   +      L+++Y   N L +A  LFD++P++N   +   
Sbjct: 60  SKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVL 119

Query: 129 IQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGH 188
           I+GY  +     A+ L+  +   G   + F     LK   ++        +   V K G 
Sbjct: 120 IRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGW 179

Query: 189 DSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQ 232
           + + FVG ALID ++ CGCV  A +VFD +                 N   +E+++   +
Sbjct: 180 ERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCRE 239

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           M A G +P   T   V+ +   +  +   +  HG   +  ++ +  V  AL+D+Y K G 
Sbjct: 240 MAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGS 299

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           +  A  +FE + +K V+ W+ +I  YA   L++ A++LF +MR+    P+  TFV VL A
Sbjct: 300 VKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKE-DRPDHITFVGVLAA 358

Query: 353 CATMEGLDLGNQIHSLVVR-VGLLSDVFVSNALMDVYAKCGRMENSVELFAE-SPKRNHV 410
           C+    LD G  +++L+VR  G+   V     ++D+   CG+++ + +L    S K +  
Sbjct: 359 CSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSG 418

Query: 411 TWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLT 470
            W  ++      G V  A +   K++E                      LEP        
Sbjct: 419 VWGALLNSCKIHGNVELAELALEKLIE----------------------LEP-------D 449

Query: 471 VKANYDMDVVVANALIDMYAKCGS----------ITDARLVFDMMNDWNEVSWN--AMIS 518
              NY   V++AN    MYA+ G           + D R+  ++   W EV     A ++
Sbjct: 450 DSGNY---VILAN----MYAQSGKWEGVEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLA 502

Query: 519 GYSMHGLS----AEVLKVFDLMQQRGWRPN 544
           G   H  S    AE+ ++  LM + G+ P+
Sbjct: 503 GDVSHSNSDAIYAELKRLEGLMHEAGYAPD 532


>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
           [Vitis vinifera]
          Length = 799

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 269/839 (32%), Positives = 410/839 (48%), Gaps = 141/839 (16%)

Query: 56  SHSYATSLQSCIQNDDLQ--TAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
           ++ YA  LQ C  ++ +    A T+H  ++  G     +  N L++VY K + L  A  L
Sbjct: 13  ANQYAAQLQQCCPHNPMSYSIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHL 72

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           FDE+ + + ++  T I  ++ +          S L RE     P      +         
Sbjct: 73  FDEIRQPDIVARTTLIAAHSSAGN--------SNLAREIFFATPLGIRDTV--------- 115

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQM 233
               C  A +    H+++ F            G +E        LF D            
Sbjct: 116 ----CYNAMITGYSHNNDGF------------GAIE--------LFRDLLRN-------- 143

Query: 234 RAVGFKPNNFTFAFVLKA-CLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL------ 286
              GF+P+NFTF  VL A  L ++  +  +  H   +K+       V  ALL +      
Sbjct: 144 ---GFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCAS 200

Query: 287 ----------------------------------YTKSGEISNARRIFEEMPKKDVIPWS 312
                                             Y ++GE+  AR+  + M +K V+ W+
Sbjct: 201 SPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWN 260

Query: 313 FMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV 372
            MI+ Y      ++A+E+F +M    +  ++FT+ SVL ACA       G Q+H+ ++R 
Sbjct: 261 AMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRT 320

Query: 373 ----GLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKA 428
                L   + V+NAL  +Y KCG+++ + ++F + P ++ V+WN ++ GYV  G + +A
Sbjct: 321 EPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEA 380

Query: 429 -------------------------------MIMFSKMLEEQVPATEVTYSSVLRACASL 457
                                          + +F++M  E     +  ++  + ACA L
Sbjct: 381 KSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWL 440

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
           AAL  G Q+H   V+  +D  +   NALI MYAKCG +  A  +F  M   + VSWNAMI
Sbjct: 441 AALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMI 500

Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
           +    HG  A+ L++F+LM +    P+ +TF+ VLS CS+ GL+E+G  YFKSM   YGI
Sbjct: 501 AALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGI 560

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQ 637
            P  +HY  M+ LL RAG   +A  +IE +P +P   IW ALL  C IH N+++G  +A+
Sbjct: 561 CPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAE 620

Query: 638 HILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFR 686
            + +  P+ + T+VLLSN+YA    W           +K   KEPG SWIE +  VH F 
Sbjct: 621 RLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEVENKVHVFL 680

Query: 687 AGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFA 746
             D  H ++  +   LE L +K RK GYIPD   VL D+  ++KE  L  HSEKLA+ F 
Sbjct: 681 VDDIVHPEVQAVYNYLEELGLKMRKLGYIPDTKFVLHDMESEQKEYVLSTHSEKLAVGFG 740

Query: 747 LFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           L K+P  + +R+ KNLRIC DCH A K +SK+V+REI++RD  RFHHF++G CSCG++W
Sbjct: 741 LLKLPLGATVRVFKNLRICGDCHNAFKFMSKVVEREIVVRDGKRFHHFKNGECSCGNYW 799


>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
 gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 240/643 (37%), Positives = 359/643 (55%), Gaps = 63/643 (9%)

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMR 234
           + F   A++ A+S  G VE  R VFD +                 N C  +AL FF +M+
Sbjct: 88  DVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQ 147

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
             GF+  ++T   VL AC  L  I+  K  HG  + T     ++V  AL ++Y K G + 
Sbjct: 148 EEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALD 207

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
            AR +F+ M  K+V+ W+ MI+ Y Q        +LFC M+ + + P+Q T  ++L A  
Sbjct: 208 QARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSA-- 265

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
                                            Y +CG ++ + + F E  +++ V W T
Sbjct: 266 ---------------------------------YFQCGYIDEACKTFREIKEKDKVCWTT 292

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
           M+VG  Q G+   A+++F +ML E V     T SSV+ +CA LA+L  G  VH   V   
Sbjct: 293 MMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFG 352

Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
            D D++V++AL+DMY+KCG   DA +VF  M   N +SWN+MI GY+ +G   E L +++
Sbjct: 353 VDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYE 412

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
            M     +P+N+TFVGVLSAC + GL+E+G+ YF S+   +G+ P  +HY+ M++LLGRA
Sbjct: 413 EMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRA 472

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLS 654
           G++DKA  LI+ + F+P+ +IW  LL  C I+ +V  G ++A+H+ + +P +   +++LS
Sbjct: 473 GYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYIMLS 532

Query: 655 NIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLE 703
           NIYA    W+  A+           K    SWIE    VH F A D +H++   I   L 
Sbjct: 533 NIYAACGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQIYEELN 592

Query: 704 WLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPS-SPIRIIKNL 762
            L  K +++G+ PD + VL DV E+EK   +  HSEKLALAF L K P   +PIRI+KN+
Sbjct: 593 RLIKKLQESGFTPDTNLVLHDVVEEEKFDSICYHSEKLALAFWLIKKPHGRTPIRIMKNI 652

Query: 763 RICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           R+C DCH  +K +SKI++R II+RD++RFHHF +G CSC D W
Sbjct: 653 RVCGDCHVFMKFVSKIIRRPIILRDINRFHHFIEGRCSCKDSW 695



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 127/521 (24%), Positives = 222/521 (42%), Gaps = 87/521 (16%)

Query: 49  FSVSEFNSHSYATSLQSCIQNDD------LQTAMTIHCQ--------------VLKKGNC 88
           +S    NS SY   L  C++++D      LQT M +H                  K GN 
Sbjct: 15  YSRGTANSESYTRLLLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFLQNRLLHLYAKSGNL 74

Query: 89  ------------LDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSS 136
                        D+F+ N +L+ Y K   + D   +FD+M   + +S+ T I G++ + 
Sbjct: 75  SDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNG 134

Query: 137 QFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGT 196
              +A+  F  +  EG E   +   + L     +   +    +   +       + FV  
Sbjct: 135 CSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWN 194

Query: 197 ALIDAFSVCGCVEFARKVFDGLFNDCF----------------EEALNFFSQMRAVGFKP 240
           AL + ++ CG ++ AR +FD + N                   E     F +M++ G  P
Sbjct: 195 ALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMP 254

Query: 241 NNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIF 300
           +  T + +L A                                   Y + G I  A + F
Sbjct: 255 DQVTISNILSA-----------------------------------YFQCGYIDEACKTF 279

Query: 301 EEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLD 360
            E+ +KD + W+ M+   AQ     DA+ LF  M    V P+ FT  SV+ +CA +  L 
Sbjct: 280 REIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLC 339

Query: 361 LGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYV 420
            G  +H   V  G+  D+ VS+AL+D+Y+KCG   ++  +F     RN ++WN+MI+GY 
Sbjct: 340 QGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYA 399

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV 480
           Q G+  +A+ ++ +ML E +    +T+  VL AC     +E G Q +  ++   + M+  
Sbjct: 400 QNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLVERG-QGYFYSISKIHGMNPT 458

Query: 481 VAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMIS 518
             +   +I++  + G +  A  L+  M  + N + W+ ++S
Sbjct: 459 FDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLS 499



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 162/351 (46%), Gaps = 67/351 (19%)

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQT----DL-------- 323
           D ++   LL LY KSG +S+AR +F++M ++DV  W+ M++ Y+++    DL        
Sbjct: 57  DTFLQNRLLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMS 116

Query: 324 -------------------SIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
                              S  A+E F RM++       +T VSVL AC+ +  +  G Q
Sbjct: 117 VHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQ 176

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
           IH  +V   L   VFV NAL ++YAKCG ++ +  LF     +N V+WN+MI GY+Q G+
Sbjct: 177 IHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQ 236

Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA 484
                 +F +M    +   +VT S++L A                               
Sbjct: 237 PETCTKLFCEMQSSGLMPDQVTISNILSA------------------------------- 265

Query: 485 LIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPN 544
               Y +CG I +A   F  + + ++V W  M+ G + +G   + L +F  M     RP+
Sbjct: 266 ----YFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPD 321

Query: 545 NLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAG 595
           N T   V+S+C+    L QG+A     V  +G++  +   +++V +  + G
Sbjct: 322 NFTISSVVSSCARLASLCQGQAVHGKAVI-FGVDHDLLVSSALVDMYSKCG 371



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 114/227 (50%), Gaps = 31/227 (13%)

Query: 376 SDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEV---------- 425
           +D F+ N L+ +YAK G + ++ +LF +  +R+  +WN M+  Y + G V          
Sbjct: 56  TDTFLQNRLLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQM 115

Query: 426 ---------------------GKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
                                 +A+  F +M EE   +T+ T+ SVL AC+ L  ++ G 
Sbjct: 116 SVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGK 175

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
           Q+H   V  +    V V NAL +MYAKCG++  AR +FD M + N VSWN+MISGY  +G
Sbjct: 176 QIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNG 235

Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSM 571
                 K+F  MQ  G  P+ +T   +LSA    G +++    F+ +
Sbjct: 236 QPETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREI 282



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/222 (22%), Positives = 100/222 (45%), Gaps = 47/222 (21%)

Query: 432 FSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAK 491
           ++++L + V + +V  +  L+    L   +P               D  + N L+ +YAK
Sbjct: 25  YTRLLLQCVRSNDVVQAKRLQTHMDLHLYQP--------------TDTFLQNRLLHLYAK 70

Query: 492 CGSITDARLVFDMMNDWNEVSWNAMIS-------------------------------GY 520
            G+++DAR +FD M+  +  SWNAM+S                               G+
Sbjct: 71  SGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGF 130

Query: 521 SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPC 580
           S +G S++ L+ F  MQ+ G+   + T V VL ACS    +++G+     +VA   +   
Sbjct: 131 SGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVAT-SLGES 189

Query: 581 IEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           +  + ++ ++  + G LD+A  L + +    +V+ W +++  
Sbjct: 190 VFVWNALTNMYAKCGALDQARWLFDRM-VNKNVVSWNSMISG 230


>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
           cordifolium]
          Length = 679

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 237/618 (38%), Positives = 353/618 (57%), Gaps = 44/618 (7%)

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           ALN +  M ++G  PN++TF F+ K+C      +  K  H   LK    +DL+V  +L+ 
Sbjct: 62  ALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLIS 121

Query: 286 LYTKSGEISNARRIFE-------------------------------EMPKKDVIPWSFM 314
           +Y ++G + +A ++F+                               E+P KDV+ W+ M
Sbjct: 122 MYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAM 181

Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL 374
           I+ YA+     +A+ELF  M +  V P++ T  +VL  C     ++LG QIHS +   G 
Sbjct: 182 ISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGF 241

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
            S++ + NAL+D+Y+KCG ME +  LF     ++ ++WNT+I GY  +    +A+++F +
Sbjct: 242 GSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQE 301

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM--DVVVANALIDMYAKC 492
           ML+      +VT  S+L ACA L A++ G  +H    K    +  +  +  +LIDMYAKC
Sbjct: 302 MLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKC 361

Query: 493 GSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL 552
           G+I  A  VFD + + +  S NAMI G++MHG +     +   M++ G  P+++TFVG+L
Sbjct: 362 GNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLL 421

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
           SACS+ GL + G   FKSM  +Y IEP +EHY  M+ LLGR+G   +A +LI  +  +P 
Sbjct: 422 SACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPD 481

Query: 613 VMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW--------- 663
            +IW +LL AC IH N+E+G L AQ ++  EP++  ++VLLSNIYA +  W         
Sbjct: 482 GVIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTL 541

Query: 664 --EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAV 721
             +K   K PG S IE   MVH F  GD  H     I  MLE ++    + G++ D S V
Sbjct: 542 LNDKGLKKVPGCSSIEIDSMVHEFLIGDKFHPQNKEIYKMLEEIDSLLAETGFVSDTSEV 601

Query: 722 LRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQR 781
           L+++ E+ KE  L  HSEKLA+AF L    P + +RI+KNLR+C +CH A K+ISKI +R
Sbjct: 602 LQEMEEELKEGALSYHSEKLAIAFGLISTKPGTKLRIVKNLRVCRNCHEATKLISKIYKR 661

Query: 782 EIIIRDVHRFHHFQDGCC 799
           EII RD  RFHHF+DG C
Sbjct: 662 EIIARDRSRFHHFKDGMC 679



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 119/484 (24%), Positives = 222/484 (45%), Gaps = 55/484 (11%)

Query: 107 LPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV 166
           LP A  +F  + E N +S+ T I+G+ +SS  + A+ L+  +   G   N + F    K 
Sbjct: 28  LPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKS 87

Query: 167 LVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------- 216
                 A+    + A + K G   +  V T+LI  ++  G VE A KVFD          
Sbjct: 88  CAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSY 147

Query: 217 -----------------GLFNDC--------------------FEEALNFFSQMRAVGFK 239
                             +F++                     ++EAL  F++M  +  K
Sbjct: 148 TAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVK 207

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           P+  T A VL  C     + + +  H       +  +L +  AL+DLY+K GE+  A  +
Sbjct: 208 PDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGL 267

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL 359
           FE +  KDVI W+ +I  YA  +   +A+ +F  M +    PN  T +S+L ACA +  +
Sbjct: 268 FEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAI 327

Query: 360 DLGNQIHSLVVR--VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIV 417
           D+G  IH  + +   G++++  +  +L+D+YAKCG +E + ++F     ++  + N MI 
Sbjct: 328 DIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIF 387

Query: 418 GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV-HCLTVKANYD 476
           G+   G    A  + S+M ++ +   ++T+  +L AC+     + G ++   +T+    +
Sbjct: 388 GFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIE 447

Query: 477 MDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDL 535
             +     +ID+  + G   +A  L+  M  + + V W +++    +H    + L++ +L
Sbjct: 448 PKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIH----KNLELGEL 503

Query: 536 MQQR 539
           + Q+
Sbjct: 504 IAQK 507



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 123/504 (24%), Positives = 218/504 (43%), Gaps = 66/504 (13%)

Query: 10  FSCKQLTHQSKINAWLRGLSAQAALSTQQCS--NSTTTPITFSVSEFNSHSYATSLQSCI 67
           F   Q  +Q   N  +RG     ALS+   S  N     I+  +S  NS+++    +SC 
Sbjct: 35  FKSIQEPNQLSWNTMIRG----HALSSDPISALNLYVYMISLGLSP-NSYTFPFLFKSCA 89

Query: 68  QNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD------------------ 109
           ++   Q    IH Q+LK G  +DL     L+++Y +   + D                  
Sbjct: 90  KSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTA 149

Query: 110 -------------ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELN 156
                        A K+FDE+P ++ +S+   I GY    ++ EA+ LF+ + +   + +
Sbjct: 150 MITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPD 209

Query: 157 PFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD 216
                  L      G  EL   + + +   G  SN  +  ALID +S CG +E A  +F+
Sbjct: 210 ESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFE 269

Query: 217 GL-FNDCF---------------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRV 260
           GL + D                 +EAL  F +M  +G  PN+ T   +L AC  L  I +
Sbjct: 270 GLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDI 329

Query: 261 AKSAHGCALKTCYEM--DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARY 318
            +  H    K    +  +  +  +L+D+Y K G I  A ++F+ +  K +   + MI  +
Sbjct: 330 GRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGF 389

Query: 319 AQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI-HSLVVRVGLLSD 377
           A    +  A +L  RM++  + P+  TFV +L AC+     DLG +I  S+ +   +   
Sbjct: 390 AMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPK 449

Query: 378 VFVSNALMDVYAKCGRMENSVELF-AESPKRNHVTWNTM-----IVGYVQLGEVGKAMIM 431
           +     ++D+  + G  + + EL  + + + + V W ++     I   ++LGE+    +M
Sbjct: 450 LEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLM 509

Query: 432 FSKMLEEQVPATEVTYSSVLRACA 455
               +E + P + V  S++    A
Sbjct: 510 ---KIEPKNPGSYVLLSNIYATSA 530



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/220 (22%), Positives = 90/220 (40%), Gaps = 53/220 (24%)

Query: 501 VFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGL 560
           VF  + + N++SWN MI G+++       L ++  M   G  PN+ TF  +  +C+    
Sbjct: 34  VFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKA 93

Query: 561 LEQGEA---------------YFKSMVANYGIEPCIEH---------------YTSMVSL 590
            ++G+                   S+++ Y     +E                YT+M++ 
Sbjct: 94  AQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITG 153

Query: 591 LGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGR-------LSAQHILDFE 643
               G++DKA K+ + IP +  V+ W A+     I    EIGR        +    +D +
Sbjct: 154 YASRGNMDKAQKMFDEIPIK-DVVSWNAM-----ISGYAEIGRYKEALELFNEMMKMDVK 207

Query: 644 PEDEATHVLLSNIYAMARSWEKAASKEPGL---SWIENQG 680
           P++     +LS       +   + + E G    SWI+N G
Sbjct: 208 PDESTMATVLS-------TCTHSGNVELGRQIHSWIDNHG 240


>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
 gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
          Length = 879

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 265/764 (34%), Positives = 407/764 (53%), Gaps = 30/764 (3%)

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
           L+    IH  +       D + +  LL++Y K + + DA K+FD +  +  + +   I  
Sbjct: 116 LEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITA 175

Query: 132 YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDS- 190
           Y       +A+ +F  +  EG +     F   L     +   E+   V  CV +  HD  
Sbjct: 176 YAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHL 235

Query: 191 -NAFVGTALIDAFSVCGCVE-----FARKVFDGLF----------NDCFEEALNFFSQMR 234
            ++   TAL++ +  CG +E     F+R   + +            + ++EAL  F  M 
Sbjct: 236 HDSSFATALVNFYGSCGDLEQAFRAFSRHRLELILATAMITQYTQRERWDEALELFKVML 295

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
             G K +      VL AC G   +   +  HG   +  ++  +    AL+++Y K G + 
Sbjct: 296 LEGVKLDRIACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLE 355

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
            A  +F  M  +DVI W+ +IA + Q     +A+ L   M+   V  ++ +FV+ L  CA
Sbjct: 356 EAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCA 415

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
             E L  G  IHS +V  G+ +DV + NA++D+Y  C   +++  +F     R+ V+WN 
Sbjct: 416 ASEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVSWNA 475

Query: 415 MIVGYV-QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
           MI  Y  Q     +A+++F +M         +++ + L ACA+ A+L  G  +H    + 
Sbjct: 476 MITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRET 535

Query: 474 NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVF 533
             + ++ VANA+++MYAK GS+  AR +F  M   + +SWN MIS ++ HG + +VL+ F
Sbjct: 536 GLESNMTVANAVLNMYAKSGSLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFF 595

Query: 534 DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY-GIEPCIEHYTSMVSLLG 592
             M   G  PN++TFV V+SACS+GGL++ G   F S++ ++  I P  EHY  MV L+ 
Sbjct: 596 RRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIA 655

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVL 652
           RAG LD A K I   P +P  +I   +LGA  +H +VE  R SA+H+++  P+  A +V+
Sbjct: 656 RAGKLDAAEKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAYVV 715

Query: 653 LSNIY---------AMARS--WEKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGM 701
           LSN+Y         A  R   +EK   KEP  S I  +  VH F  GDT++A    I   
Sbjct: 716 LSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTNARTPEILEE 775

Query: 702 LEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKN 761
           LE L+++  KAGY PD + +L DV +++K+R L  HSEKLA+AF L    P + +RIIKN
Sbjct: 776 LERLSLEMAKAGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTAPGTSLRIIKN 835

Query: 762 LRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           LR+C DCHTA K ISKI  REI++RD HRFHHF +G CSCGD+W
Sbjct: 836 LRVCGDCHTATKFISKITGREIVVRDSHRFHHFDNGTCSCGDYW 879



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 169/592 (28%), Positives = 282/592 (47%), Gaps = 23/592 (3%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           YA  L     +  L     +H ++ K       F  ++L+ +YV    L DA   FD MP
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVL-VSMGWAELCP 177
            ++ +++   I+ +       +A+ LF ++  EG       F A L          E   
Sbjct: 61  VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN----------------D 221
            +   +     +S+ +V T L+  +  C  VE ARKVFDG+ +                D
Sbjct: 121 RIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQD 180

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE--MDLYV 279
             E+A+  F  M   G K    TF  VL AC  L  + VAK    C  +  ++   D   
Sbjct: 181 HHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSF 240

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
           A AL++ Y   G++  A R F    + ++I  + MI +Y Q +   +A+ELF  M    V
Sbjct: 241 ATALVNFYGSCGDLEQAFRAFSRH-RLELILATAMITQYTQRERWDEALELFKVMLLEGV 299

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
             ++   ++VL AC+   GL+ G  IH  +  +     V   NAL+++Y KCG +E +VE
Sbjct: 300 KLDRIACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVE 359

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +F     R+ ++WNT+I  + Q  +  +A+ +   M  + V A ++++ + L  CA+  A
Sbjct: 360 VFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASEA 419

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
           L  G  +H   V++    DV++ NA++DMY  C S  DA  VF  M   ++VSWNAMI+ 
Sbjct: 420 LAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVSWNAMITA 479

Query: 520 YSMHG-LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           Y+    LS+E L +F  MQ  G+ P+ ++FV  LSAC+    L +G+      +   G+E
Sbjct: 480 YAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGK-LLHDRIRETGLE 538

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
             +    +++++  ++G L  A K+   +P  P V+ W  ++ A   H + +
Sbjct: 539 SNMTVANAVLNMYAKSGSLVLARKMFGKMPL-PDVISWNGMISAFAQHGHAD 589



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 140/504 (27%), Positives = 226/504 (44%), Gaps = 29/504 (5%)

Query: 160 FTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--- 216
           +   L V+      +L   V A + K   D   F+G  L+  +  CG +  A+  FD   
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60

Query: 217 --------------GLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLG-LDTIRVA 261
                         G   D  E+AL+ F  M+  G  P N  F  VL AC    + +   
Sbjct: 61  VQDALTWARLIRAHGQIGDS-EQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEG 119

Query: 262 KSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQT 321
           +  HG    T  E D YV+  LL +Y K   + +AR++F+ +  K V+ W+ MI  YAQ 
Sbjct: 120 RRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQ 179

Query: 322 DLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV--GLLSDVF 379
           D    A+++F  M    V   + TF+ VL AC+ ++ L++   +   V       L D  
Sbjct: 180 DHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSS 239

Query: 380 VSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ 439
            + AL++ Y  CG +E +   F+   +   +    MI  Y Q     +A+ +F  ML E 
Sbjct: 240 FATALVNFYGSCGDLEQAFRAFSRH-RLELILATAMITQYTQRERWDEALELFKVMLLEG 298

Query: 440 VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR 499
           V    +   +VL AC+    LE G  +H    +  +D  V   NALI+MY KCGS+ +A 
Sbjct: 299 VKLDRIACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAV 358

Query: 500 LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGG 559
            VF  M   + +SWN +I+ +  H    E L +  LMQ  G + + ++FV  L  C+   
Sbjct: 359 EVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASE 418

Query: 560 LLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRAL 619
            L +G     S +   GI+  +    +++ + G     D A+++   +  +  V  W A+
Sbjct: 419 ALAKGR-MIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVS-WNAM 476

Query: 620 LGACIIHNNVEIGRLSAQHILDFE 643
           + A          RLS++ +L F+
Sbjct: 477 ITAYAAQP-----RLSSEALLLFQ 495



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 116/442 (26%), Positives = 202/442 (45%), Gaps = 12/442 (2%)

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
           +A +L       ++ + K  H    K+  +   ++   L+ +Y   G + +A+  F+ MP
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC-ATMEGLDLGN 363
            +D + W+ +I  + Q   S  A+ LF  M+   VAP    FV+VL AC A  E L+ G 
Sbjct: 61  VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
           +IH ++    + SD +VS  L+ +Y KC  +E++ ++F     +  V WN MI  Y Q  
Sbjct: 121 RIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQD 180

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD--MDVVV 481
              +A+ +F  ML E V A  +T+  VL AC+ L  LE    V     +  +D   D   
Sbjct: 181 HHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSF 240

Query: 482 ANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW 541
           A AL++ Y  CG +  A   F   +    +   AMI+ Y+      E L++F +M   G 
Sbjct: 241 ATALVNFYGSCGDLEQAFRAFS-RHRLELILATAMITQYTQRERWDEALELFKVMLLEGV 299

Query: 542 RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAA 601
           + + +  + VL+ACS    LE+G       +     +  +    +++++ G+ G L++A 
Sbjct: 300 KLDRIACMAVLNACSGPRGLEEGR-MIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAV 358

Query: 602 KLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPED--EATHVLLSNIYAM 659
           ++   +  +  V+ W  ++ A   H+        A H+L     D  +A  +   N   +
Sbjct: 359 EVFRSMQHR-DVISWNTIIAAHGQHSQ----HPEALHLLHLMQLDGVKADKISFVNALPL 413

Query: 660 ARSWEKAASKEPGLSWIENQGM 681
             + E  A      SWI   G+
Sbjct: 414 CAASEALAKGRMIHSWIVESGI 435



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/292 (21%), Positives = 121/292 (41%), Gaps = 46/292 (15%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           S+  +L  C  ++ L     IH  +++ G   D+   N +L++Y       DA+++F  M
Sbjct: 406 SFVNALPLCAASEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAM 465

Query: 118 PERNTISFVTTIQGYTVSSQF-VEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
             R+ +S+   I  Y    +   EA+ LF  +   G   +  +F A L    +       
Sbjct: 466 KARDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEG 525

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF-----------DGLF-----N 220
             +   + + G +SN  V  A+++ ++  G +  ARK+F           +G+      +
Sbjct: 526 KLLHDRIRETGLESNMTVANAVLNMYAKSGSLVLARKMFGKMPLPDVISWNGMISAFAQH 585

Query: 221 DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
              ++ L FF +M   G  PN+ TF  V+ AC           +HG  +K   +  L+V+
Sbjct: 586 GHADQVLRFFRRMNHEGKLPNDVTFVSVVSAC-----------SHGGLVKDGVQ--LFVS 632

Query: 281 V---------------ALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
           +                ++DL  ++G++  A +     P K D +  S M+ 
Sbjct: 633 LLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLG 684


>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Vitis vinifera]
          Length = 704

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 233/600 (38%), Positives = 360/600 (60%), Gaps = 13/600 (2%)

Query: 218 LFNDCFEEALNFFSQMRAVG-FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
           +F   + EAL  F  +   G +  ++ T+  ++ AC+GL +IR  K      + +  + D
Sbjct: 106 VFFKRYHEALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPD 165

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
            Y+   +L ++ K G + +ARR+F+EMP+K+++ W+ +I          +A  LF  M Q
Sbjct: 166 EYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQ 225

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
            F       FV++++A A +  +  G Q+HS  ++ G+  DVFV+ AL+D+Y+KCG +E+
Sbjct: 226 DFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIED 285

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           +  +F + P++  V WN++I GY   G   +A+ M+ +M +  V     T+S ++R CA 
Sbjct: 286 AQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICAR 345

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           LA+LE   Q H   V+  + +D+V   AL+D+Y+K G I DA+ VFDMM   N +SWNA+
Sbjct: 346 LASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNAL 405

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           I+GY  HG   E +++F+ M   G  PN++TF+ VLSACS  GL ++G   F+SM  ++ 
Sbjct: 406 IAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHK 465

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
           I+P   HY  M+ LLGR G LD+A  LI+  PF+P+V +W ALL AC +H N E+G+ +A
Sbjct: 466 IKPRAMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAA 525

Query: 637 QHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----KEPGL------SWIENQGMVHYF 685
           + +    PE  + +V+L NIY  +   E+AA+     K  GL      SWIE +   + F
Sbjct: 526 EKLYGMGPEKLSNYVVLLNIYNRSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGF 585

Query: 686 RAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAF 745
            +GD  HA    I   L+ L ++  K GY+P    +L DV E E ER L  HSEKLA+AF
Sbjct: 586 ISGDKCHAQSKEIYQKLDELMLEISKHGYVPQDKFLLPDVDEQE-ERVLLYHSEKLAIAF 644

Query: 746 ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            L      +P++I+++ RIC DCH+AIK+I+ + +REI++RD  RFHHF+DG CSCGD+W
Sbjct: 645 GLINTSDWTPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 192/383 (50%), Gaps = 18/383 (4%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           + +S +Y   + +CI    ++    +   ++  G   D +  N +L ++VK   + DA +
Sbjct: 128 DMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARR 187

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           LFDEMPE+N +S+ T I G   +  + EA  LF  + ++  +     F   ++    +G 
Sbjct: 188 LFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGL 247

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------------- 218
                 + +C  K G   + FV  ALID +S CG +E A+ VFD +              
Sbjct: 248 IFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAG 307

Query: 219 --FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
              +   EEAL+ + +MR  G K +NFTF+ +++ C  L ++  AK AH   ++  + +D
Sbjct: 308 YALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLD 367

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           +    AL+DLY+K G I +A+ +F+ MP K+VI W+ +IA Y      ++AVE+F RM  
Sbjct: 368 IVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLH 427

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALM-DVYAKCGRME 395
             + PN  TF++VL AC+     D G +I   + R   +    +  A M ++  + G ++
Sbjct: 428 EGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLD 487

Query: 396 NSVELFAESPKRNHVT-WNTMIV 417
            +  L  ++P +  V  W  ++ 
Sbjct: 488 EAFALIKDAPFKPTVNMWAALLT 510



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 84/354 (23%), Positives = 143/354 (40%), Gaps = 64/354 (18%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           +H   LK G   D+F    L+++Y K   + DA  +FD+MPE+ T+ + + I GY +   
Sbjct: 254 LHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGY 313

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
             EA+ ++  +   G +++ F F+  +++   +   E      A + + G   +    TA
Sbjct: 314 SEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTA 373

Query: 198 LIDAFSVCGCVEFARKVFD---------------GLFNDCFE-EALNFFSQMRAVGFKPN 241
           L+D +S  G +E A+ VFD               G  N     EA+  F +M   G  PN
Sbjct: 374 LVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPN 433

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
           + TF  VL AC                                   + SG       IFE
Sbjct: 434 HVTFLAVLSAC-----------------------------------SYSGLSDRGWEIFE 458

Query: 302 EMPKKDVIP-----WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM 356
            M +   I      ++ MI    +  L +D  E F  ++ A   P    + ++L AC   
Sbjct: 459 SMSRDHKIKPRAMHYACMIELLGREGL-LD--EAFALIKDAPFKPTVNMWAALLTACRVH 515

Query: 357 EGLDLGNQIHSLVVRVG--LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRN 408
           +  +LG      +  +G   LS+  V   L+++Y + GR+E +  +     +R 
Sbjct: 516 KNFELGKFAAEKLYGMGPEKLSNYVV---LLNIYNRSGRLEEAAAVIQTLKRRG 566


>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
          Length = 960

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 254/778 (32%), Positives = 420/778 (53%), Gaps = 31/778 (3%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           S+   L++C +  D+++   +H  ++K G     F  N L+++Y K + L  A +LFD  
Sbjct: 184 SFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGF 243

Query: 118 PER-NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
            E+ + + + + +  Y+ S + +E + LF  +H  G   N +   + L       +A+L 
Sbjct: 244 QEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLG 303

Query: 177 PCVFACVYKLG-HDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND-------------- 221
             + A V K   H S  +V  ALI  ++ CG +  A ++   + N               
Sbjct: 304 KEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQ 363

Query: 222 --CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
              ++EAL FFS M A G K +  +   ++ A   L  +      H   +K  ++ +L V
Sbjct: 364 NLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQV 423

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
              L+D+Y+K        R F  M  KD+I W+ +IA YAQ D  ++A+ELF  + +  +
Sbjct: 424 GNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRM 483

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
             ++    S+L+A + ++ + +  +IH  ++R GLL D  + N L+DVY KC  M  +  
Sbjct: 484 EIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL-DTVIQNELVDVYGKCRNMGYATR 542

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +F     ++ V+W +MI      G   +A+ +F +M+E  + A  V    +L A ASL+A
Sbjct: 543 VFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSA 602

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
           L  G ++HC  ++  + ++  +A A++DMYA CG +  A+ VFD +     + + +MI+ 
Sbjct: 603 LNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINA 662

Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
           Y MHG     +++FD M+     P++++F+ +L ACS+ GLL++G  + K M   Y +EP
Sbjct: 663 YGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEP 722

Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHI 639
             EHY  +V +LGRA  + +A + ++ +  +P+  +W ALL AC  H+  EIG ++AQ +
Sbjct: 723 WPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRL 782

Query: 640 LDFEPEDEATHVLLSNIYAMARSWE---------KAAS--KEPGLSWIENQGMVHYFRAG 688
           L+ EP++    VL+SN++A    W          KA+   K PG SWIE  G VH F A 
Sbjct: 783 LELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTAR 842

Query: 689 DTSHADMNIIRGMLEWLNMK-SRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFAL 747
           D SH +   I   L  +  K  R+ GY+ D   VL +V E EK + L  HSE++A+A+ L
Sbjct: 843 DKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGL 902

Query: 748 FKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            + P  + +RI KNLR+C DCHT  K++SK+ +R+I++RD +RFHHF+ G CSCGD W
Sbjct: 903 LRTPDRACLRITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 144/522 (27%), Positives = 258/522 (49%), Gaps = 22/522 (4%)

Query: 49  FSVSEFNS--HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDL-FATNVLLNVYVKLN 105
             VSE NS   ++A  L+ C +   +     +H ++ K     +L F    L+ +Y K  
Sbjct: 71  LDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCG 130

Query: 106 RLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLK 165
            L DA K+FDEMP+R   ++ T I  Y  + +   A+ L+  +  EG  L   +F A LK
Sbjct: 131 SLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLK 190

Query: 166 VLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG-------- 217
               +        + + + KLG+ S  F+  AL+  ++    +  AR++FDG        
Sbjct: 191 ACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAV 250

Query: 218 LFNDCFE---------EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCA 268
           L+N             E L  F +M   G  PN++T    L AC G    ++ K  H   
Sbjct: 251 LWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASV 310

Query: 269 LK-TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDA 327
           LK + +  +LYV  AL+ +YT+ G++  A RI  +M   DV+ W+ +I  Y Q  +  +A
Sbjct: 311 LKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEA 370

Query: 328 VELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDV 387
           +E F  M  A    ++ +  S++ A   +  L  G ++H+ V++ G  S++ V N L+D+
Sbjct: 371 LEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDM 430

Query: 388 YAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTY 447
           Y+KC         F     ++ ++W T+I GY Q     +A+ +F  + ++++   E+  
Sbjct: 431 YSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMIL 490

Query: 448 SSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND 507
            S+LRA + L ++    ++HC  ++    +D V+ N L+D+Y KC ++  A  VF+ +  
Sbjct: 491 GSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKG 549

Query: 508 WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFV 549
            + VSW +MIS  +++G  +E +++F  M + G   +++  +
Sbjct: 550 KDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALL 591



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 173/347 (49%), Gaps = 18/347 (5%)

Query: 215 FDGLFNDCFEEALNFFSQMRAVGFKPNNF---TFAFVLKACLGLDTIRVAKSAHGCALKT 271
           FDG+  + F+           +    NN     FA+VL+ C     +   +  H    KT
Sbjct: 60  FDGVLTEAFQR----------LDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKT 109

Query: 272 --CYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVE 329
              +E+D ++A  L+ +Y K G + +A ++F+EMP +    W+ MI  Y        A+ 
Sbjct: 110 FPSFELD-FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALA 168

Query: 330 LFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYA 389
           L+  MR   V     +F ++L+ACA +  +  G+++HSL+V++G  S  F+ NAL+ +YA
Sbjct: 169 LYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYA 228

Query: 390 KCGRMENSVELF-AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYS 448
           K   +  +  LF     K + V WN+++  Y   G+  + + +F +M          T  
Sbjct: 229 KNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIV 288

Query: 449 SVLRACASLAALEPGMQVHCLTVKAN-YDMDVVVANALIDMYAKCGSITDARLVFDMMND 507
           S L AC   +  + G ++H   +K++ +  ++ V NALI MY +CG +  A  +   MN+
Sbjct: 289 SALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNN 348

Query: 508 WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSA 554
            + V+WN++I GY  + +  E L+ F  M   G + + ++   +++A
Sbjct: 349 ADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 144/277 (51%), Gaps = 3/277 (1%)

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDV-FVSNALMDVYAKCGRMENSVELFAES 404
           F  VL+ C     +  G Q+HS + +     ++ F++  L+ +Y KCG ++++ ++F E 
Sbjct: 83  FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEM 142

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
           P R    WNTMI  YV  GE   A+ ++  M  E VP    ++ ++L+ACA L  +  G 
Sbjct: 143 PDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGS 202

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE-VSWNAMISGYSMH 523
           ++H L VK  Y     + NAL+ MYAK   ++ AR +FD   +  + V WN+++S YS  
Sbjct: 203 ELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTS 262

Query: 524 GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEH 583
           G S E L++F  M   G  PN+ T V  L+AC      + G+    S++ +      +  
Sbjct: 263 GKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYV 322

Query: 584 YTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
             +++++  R G + +A +++  +     V+ W +L+
Sbjct: 323 CNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLI 358


>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like, partial [Cucumis sativus]
          Length = 658

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 231/593 (38%), Positives = 344/593 (58%), Gaps = 12/593 (2%)

Query: 224 EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
           +  +  +  M+     PN FTF +VLKAC G     + K  HG   K  +  +++V  +L
Sbjct: 67  DAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSL 126

Query: 284 LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
           + +Y K G+IS AR +F+++  + V+ W+ +I+ Y Q    ++A+ +F  MRQ  V P+ 
Sbjct: 127 VSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDW 186

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
              VSV+ A   +E L  G  IH LV ++GL  +  +  +L  +YAK G +E +   F  
Sbjct: 187 IALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNR 246

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
             K N + WN MI GY   G   +A+ +F +M+ + +    +T  S + A A + +LE  
Sbjct: 247 MEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELA 306

Query: 464 MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMH 523
             +     K+ Y  D  V   LIDMYAKCGSI  AR VFD + D + V W+ MI GY +H
Sbjct: 307 RWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLH 366

Query: 524 GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEH 583
           G   E + +++ M+Q G  PN+ TF+G+L+AC N GL+++G   F  M  ++GIEP  +H
Sbjct: 367 GHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLM-PDHGIEPHHQH 425

Query: 584 YTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFE 643
           Y+ +V LLGRAG+L++A   I  +P +P V +W ALL AC IH  V +G ++A+ +   +
Sbjct: 426 YSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILD 485

Query: 644 PEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSH 692
           P +   +V LSN+YA A  W           +K  +K+ G S IE  G +  F+ GD SH
Sbjct: 486 PYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSH 545

Query: 693 ADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPP 752
                I   L+ L  + + AGY+P + +VL D+  +E E  L  HSE+LA+A+ +    P
Sbjct: 546 PKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAP 605

Query: 753 SSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            + +RI KNLR C++CH+AIK+ISK+V REIIIRD  RFHHF+DG CSCGDFW
Sbjct: 606 GTTLRITKNLRACINCHSAIKLISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 658



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 148/272 (54%)

Query: 291 GEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVL 350
           G+++ A + F E+ + D++ W+ +I  Y Q ++    + ++  M+ + V PN FTF+ VL
Sbjct: 33  GDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVL 92

Query: 351 QACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHV 410
           +AC       +G QIH    + G  S+VFV N+L+ +YAK G++  +  +F +   R  V
Sbjct: 93  KACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVV 152

Query: 411 TWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLT 470
           +W ++I GYVQ G+  +A+ +F +M +  V    +   SV+ A  ++  L  G  +H L 
Sbjct: 153 SWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLV 212

Query: 471 VKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVL 530
            K   + +  +  +L  MYAK G +  AR  F+ M   N + WNAMISGY+ +G   E +
Sbjct: 213 TKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAI 272

Query: 531 KVFDLMQQRGWRPNNLTFVGVLSACSNGGLLE 562
           K+F  M  +  R +++T    + A +  G LE
Sbjct: 273 KLFREMITKNIRVDSITMRSAVLASAQVGSLE 304



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 109/448 (24%), Positives = 195/448 (43%), Gaps = 23/448 (5%)

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A K F E+ E + + +   I+GYT  +     + ++  +       N F F   LK    
Sbjct: 38  AHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGG 97

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF------ 223
                +   +    +K G  SN FV  +L+  ++  G + +AR VFD L +         
Sbjct: 98  TSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSI 157

Query: 224 ----------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY 273
                      EALN F +MR    KP+      V+ A   ++ +   KS HG   K   
Sbjct: 158 ISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGL 217

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
           E +  + ++L  +Y K G +  AR  F  M K ++I W+ MI+ YA      +A++LF  
Sbjct: 218 EFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFRE 277

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           M    +  +  T  S + A A +  L+L   +   + +     D FV+  L+D+YAKCG 
Sbjct: 278 MITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGS 337

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           +  +  +F     ++ V W+ MI+GY   G   +A+ ++++M +  V   + T+  +L A
Sbjct: 338 IYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTA 397

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVS 512
           C +   ++ G ++  L      +      + ++D+  + G +  A   +  M        
Sbjct: 398 CKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSV 457

Query: 513 WNAMISGYSMH------GLSAEVLKVFD 534
           W A++S   +H       ++AE L + D
Sbjct: 458 WGALLSACKIHRKVRLGEIAAEQLFILD 485



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 133/260 (51%), Gaps = 2/260 (0%)

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
           +Q++  ++  GL    F+    ++     G +  + + F E  + + + WN +I GY Q 
Sbjct: 4   DQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQK 63

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
             V   + M+  M   QV     T+  VL+AC   +    G Q+H  T K  +  +V V 
Sbjct: 64  NIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQ 123

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
           N+L+ MYAK G I+ AR+VFD ++D   VSW ++ISGY  +G   E L VF  M+Q   +
Sbjct: 124 NSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVK 183

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           P+ +  V V++A +N   L QG++    +V   G+E   +   S+ ++  + G L + A+
Sbjct: 184 PDWIALVSVMTAYTNVEDLGQGKS-IHGLVTKLGLEFEPDIVISLTTMYAKRG-LVEVAR 241

Query: 603 LIEGIPFQPSVMIWRALLGA 622
                  +P++++W A++  
Sbjct: 242 FFFNRMEKPNLILWNAMISG 261


>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
 gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
          Length = 1108

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 253/766 (33%), Positives = 389/766 (50%), Gaps = 38/766 (4%)

Query: 71   DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPER-NTISFVTTI 129
            D   A   H ++ + G   D+   N ++++Y K      A  +F  +  + + IS+ T +
Sbjct: 350  DFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTML 409

Query: 130  QGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHD 189
                    F + V  F  +   G + N  +F A L    +    +    + + +     D
Sbjct: 410  GASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRD 469

Query: 190  -SNAFVGTALIDAFSVCGCVEFARKVFD----------------GLF--NDCFEEALNFF 230
               + V T L+  +  CG +  A  VF                 G +  ND  +EA    
Sbjct: 470  YVESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGAL 529

Query: 231  SQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKS 290
             +M   G  P+  +F  VL +C      +V +    C L++ Y     +  AL+ ++ + 
Sbjct: 530  MEMLQGGVLPDALSFTSVLSSCYCSQEAQVLRM---CILESGYR-SACLETALISMHGRC 585

Query: 291  GEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVL 350
             E+  AR +F EM   DV+ W+ M++  A+     +   LF RM+   V P++FT  + L
Sbjct: 586  RELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTL 645

Query: 351  QACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHV 410
              C     L LG  IH+ V  +GL +D+ V NAL+++Y+ CG    ++  F     R+ V
Sbjct: 646  DTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLV 705

Query: 411  TWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLT 470
            +WN M   Y Q G   +A+++F +M  E V   ++T+S+ L      A +  G   H L 
Sbjct: 706  SWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALA 765

Query: 471  VKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVL 530
             ++  D DV VA  L+ +YAKCG + +A  +F    DW  V  NA+I   + HG S E +
Sbjct: 766  AESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAV 825

Query: 531  KVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSL 590
            K+F  MQQ G RP+  T V ++SAC + G++E+G + F +M   +GI P +EHY   V L
Sbjct: 826  KMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDL 885

Query: 591  LGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATH 650
            LGRAG L+ A ++I  +PF+ + ++W +LLG C +  + E+G   AQ IL+ +P + A H
Sbjct: 886  LGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAH 945

Query: 651  VLLSNIYAMARSWEKA-----------ASKEPGLSWIENQGMVHYFRAGDTSHADMNIIR 699
            V+LSNIY     W+ A               PG+SW E    VH F AGD SH   + I 
Sbjct: 946  VVLSNIYCATGKWKDADVDRKKMLDENVKNAPGMSWFEIGKQVHEFVAGDRSHPKTDEIY 1005

Query: 700  GMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRII 759
             +L+ L +  R+AGY  D      DV ++ KE+ L  HSE++A+AF L   PP + ++I+
Sbjct: 1006 VVLDKLELLMRRAGYEADKGL---DVEDELKEKALGYHSERIAIAFGLIATPPETTLKIV 1062

Query: 760  KNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            KNLR+C DCHTA K IS ++ REII+RD  RFHHF +G CSC D W
Sbjct: 1063 KNLRVCGDCHTATKYISMVMGREIIVRDSLRFHHFSNGTCSCKDCW 1108



 Score =  218 bits (556), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 167/598 (27%), Positives = 271/598 (45%), Gaps = 43/598 (7%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
             Y   LQSC+ ++DL      H  +   G    LF  N L+N+YV+   L +A  +F +
Sbjct: 26  QEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSK 85

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHEL-NPFAFTAFLKVLVSMGWAEL 175
           M ERN +S+   I        F  A  LF T+  E     N +   A L    +     +
Sbjct: 86  MEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAI 145

Query: 176 CPCVFACVYKLGHD----SNAFVGTALIDAFSVCGCVEFARKVFDGLFND---------- 221
              + A +++LG +    +   VG A+I+ ++ CG +E A  VF  +             
Sbjct: 146 GRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAG 205

Query: 222 -------CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
                   + +AL  F +M      PN  TF   L AC  L   R     H    +    
Sbjct: 206 AYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSL---RDGTWLHSLLHEASLG 262

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKK---DVIPWSFMIARYAQTDLSIDAVELF 331
            D   + AL+++Y K G+   A  +F+ M  +   D++ W+ MI+   +     DA+ +F
Sbjct: 263 FDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIF 322

Query: 332 CRMRQAFVAPNQFTFVSVLQACATMEGLDLG--NQIHSLVVRVGLLSDVFVSNALMDVYA 389
            R+R   + PN  T +++L A A   G+D G     H  +   G L DV + NA++ +YA
Sbjct: 323 RRLRLEGMRPNSVTLITILNALAA-SGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYA 381

Query: 390 KCGRMENSVELFAESP-KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYS 448
           KCG    +  +F     K + ++WNTM+         GK +  F  ML   +   +V++ 
Sbjct: 382 KCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFI 441

Query: 449 SVLRACASLAALEPGMQVHCLTVKANYD-MDVVVANALIDMYAKCGSITDARLVFDMM-- 505
           ++L AC++  AL+ G ++H L +    D ++  VA  L+ MY KCGSI++A LVF  M  
Sbjct: 442 AILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPL 501

Query: 506 NDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE 565
              + V+WN M+  Y+ +  S E       M Q G  P+ L+F  VLS+C       Q  
Sbjct: 502 PSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSC----YCSQEA 557

Query: 566 AYFKSMVANYGIE-PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
              +  +   G    C+E  T+++S+ GR   L++A  +   +     V+ W A++ A
Sbjct: 558 QVLRMCILESGYRSACLE--TALISMHGRCRELEQARSVFNEMD-HGDVVSWTAMVSA 612



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 154/596 (25%), Positives = 258/596 (43%), Gaps = 69/596 (11%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQV----LKKGNCLDLFATNVLLNVYVKLNRLPDA 110
           NS++    L +C  + DL    +IH  +    L++ +       N ++N+Y K   L DA
Sbjct: 126 NSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDA 185

Query: 111 TKLFDEMPERNTISFVTTIQGYTVSSQFV-EAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
             +F  +PE++ +S+      Y    +F  +A+ +F  +  +    N   F   L    S
Sbjct: 186 IAVFLAIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTS 245

Query: 170 M---GWAELCPCVFACVYKLGHDS----NAFVGTALIDAFSVCGCVEFARKVF------- 215
           +    W          ++ L H++    +     ALI+ +  CG  E A  VF       
Sbjct: 246 LRDGTW----------LHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQ 295

Query: 216 -------DGLFNDCFE-----EALNFFSQMRAVGFKPNNFTFAFVLKACL--GLDTIRVA 261
                  + + +   E     +A+  F ++R  G +PN+ T   +L A    G+D    A
Sbjct: 296 ELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVD-FGAA 354

Query: 262 KSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK-DVIPWSFMIARYAQ 320
           +  HG   ++ Y  D+ +  A++ +Y K G  S A  +F  +  K DVI W+ M+     
Sbjct: 355 RGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASED 414

Query: 321 TDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV-RVGLLSDVF 379
                  V  F  M  A + PN+ +F+++L AC+  E LD G +IHSL++ R     +  
Sbjct: 415 RKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESS 474

Query: 380 VSNALMDVYAKCGRMENSVELFAES--PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
           V+  L+ +Y KCG +  +  +F E   P R+ VTWN M+  Y Q     +A     +ML+
Sbjct: 475 VATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQ 534

Query: 438 EQVPATEVTYSSVLRAC--------ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMY 489
             V    ++++SVL +C          +  LE G +  CL              ALI M+
Sbjct: 535 GGVLPDALSFTSVLSSCYCSQEAQVLRMCILESGYRSACLE------------TALISMH 582

Query: 490 AKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFV 549
            +C  +  AR VF+ M+  + VSW AM+S  + +    EV  +F  MQ  G  P+  T  
Sbjct: 583 GRCRELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLA 642

Query: 550 GVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
             L  C     L  G+    + V   G+E  I    +++++    G   +A    E
Sbjct: 643 TTLDTCLASTTLGLGKV-IHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFE 697



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 151/298 (50%), Gaps = 21/298 (7%)

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           + ++LQ+C     L  G   H L+   GL   +F+ N L+++Y +CG +E +  +F++  
Sbjct: 28  YTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPA-TEVTYSSVLRACASLAALEPGM 464
           +RN V+W  +I    Q G   +A  +F  ML E   A    T  ++L ACA+   L  G 
Sbjct: 88  ERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147

Query: 465 QVHC----LTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY 520
            +H     L ++       +V NA+I+MYAKCGS+ DA  VF  + + + VSW AM   Y
Sbjct: 148 SIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAY 207

Query: 521 SM-HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV--ANYGI 577
           +       + L++F  M  +   PN +TF+  L AC++   L  G  +  S++  A+ G 
Sbjct: 208 AQERRFYPDALRIFREMLLQPLAPNVITFITALGACTS---LRDG-TWLHSLLHEASLGF 263

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMI--WRALLGACIIHNNVEIGR 633
           +P   +  +++++ G+ G  + A  + + +  +  + +  W A++ A     +VE GR
Sbjct: 264 DPLASN--ALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISA-----SVEAGR 314



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/284 (23%), Positives = 119/284 (41%), Gaps = 32/284 (11%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           + AT+L +C+ +  L     IH  V + G   D+   N LLN+Y       +A   F+ M
Sbjct: 640 TLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETM 699

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
             R+ +S+      Y  +    EAV LF  +  EG + +   F+  L V           
Sbjct: 700 KARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGK 759

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG-------LFNDCF------- 223
              A   + G DS+  V T L+  ++ CG ++ A  +F G       L N          
Sbjct: 760 LFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHG 819

Query: 224 --EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
             EEA+  F +M+  G +P+  T   ++ AC     +       GC+  +   M  Y  +
Sbjct: 820 FSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVE-----EGCS--SFLTMKEYFGI 872

Query: 282 A--------LLDLYTKSGEISNARRIFEEMPKKD-VIPWSFMIA 316
           +         +DL  ++G++ +A +I  +MP +D  + W+ ++ 
Sbjct: 873 SPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLG 916


>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1212

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 242/782 (30%), Positives = 419/782 (53%), Gaps = 31/782 (3%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
            ++ ++   L++C    + +    IH   +K G    +F  N L+ +Y K   L  A  L
Sbjct: 146 LDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVL 205

Query: 114 FDE--MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
           FD   M + + +S+ + I  +    + +EA+ LF  +   G E N + F + L+      
Sbjct: 206 FDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPT 265

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG-LFNDC-------- 222
           + ++   + A + K  H ++ +V  ALI  ++ CG +E A +VF   LF DC        
Sbjct: 266 FIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLS 325

Query: 223 -------FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
                  + +A+N F  M+  G KP+  +   ++ A      +      H  A+K   + 
Sbjct: 326 GMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDS 385

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
           ++++  +L+D+Y K   +      FE MP+KD+I W+ +IA YAQ +  +DA+ L  +++
Sbjct: 386 NMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQ 445

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
              +  +     S+L AC+ ++   L  +IH  V++ GL +D+ + NA+++VY +   ++
Sbjct: 446 LEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGL-ADILIQNAIVNVYGELALVD 504

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
            +  +F     ++ V+W +MI   V  G   +A+ +F+ ++E  +    +T  SVL A A
Sbjct: 505 YARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAA 564

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
           +L++L+ G ++H   ++  + ++ ++AN+L+DMYA+CG++ +AR +F+ +   + + W +
Sbjct: 565 ALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTS 624

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           MI+   MHG   + + +F  M      P+++TF+ +L ACS+ GL+ +G+ +F+ M   Y
Sbjct: 625 MINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEY 684

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS 635
            +EP  EHY  +V LL R+  L++A   +  +P +PS  +W ALLGAC IH+N ++G ++
Sbjct: 685 KLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVA 744

Query: 636 AQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHY 684
           A+ +L    E+   +VL+SN +A    W                K+PG SWIE +  +H 
Sbjct: 745 AKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVENKIHT 804

Query: 685 FRAGDTSHADM-NIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLAL 743
           F A D SH    NI   + ++  +   K GY      V  DV E+EK + L+ HSE+LAL
Sbjct: 805 FMARDKSHPQCNNIYLKLAQFTKLLKEKGGYRAQTKLVFHDVCEEEKTQMLYGHSERLAL 864

Query: 744 AFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGD 803
            + L      + +RI KNLRIC DCH   KI S+I QR +++RD  RFHHF+ G CSCGD
Sbjct: 865 GYGLLVTSKGTCLRITKNLRICDDCHAFFKIASEISQRTLVVRDASRFHHFERGLCSCGD 924

Query: 804 FW 805
           FW
Sbjct: 925 FW 926



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 163/621 (26%), Positives = 311/621 (50%), Gaps = 26/621 (4%)

Query: 26  RGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKK 85
           R +S + A   Q  ++  T P+  +       +Y+ +L+ C  +  L     +H   LK 
Sbjct: 18  RPISLKEAF--QSLTHFFTDPLPTTTRFPLQQAYSQALELCASHKALPQGQQLHAHFLKT 75

Query: 86  GNCLD-LFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGL 144
            N LD +F     +++Y K     DA K+FD+M ER   ++   I     + ++VEA+ L
Sbjct: 76  QNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIEL 135

Query: 145 FSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSV 204
           +  +   G  L+ F F   LK   +     L   +     K G+    FV  ALI  ++ 
Sbjct: 136 YKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAK 195

Query: 205 CGCVEFARKVFD-GL--------FNDCFE---------EALNFFSQMRAVGFKPNNFTFA 246
           CG +  AR +FD GL        +N             EAL+ F +M+ VG + N +TF 
Sbjct: 196 CGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFV 255

Query: 247 FVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK 306
             L+AC G   I++ +  H   LK+ +  D+YV+ AL+ +Y   G++ +A R+F+ M  K
Sbjct: 256 SALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFK 315

Query: 307 DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIH 366
           D + W+ +++   Q D+  DA+  F  M+ +   P+Q + ++++ A      L  G ++H
Sbjct: 316 DCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVH 375

Query: 367 SLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVG 426
           +  ++ G+ S++ + N+L+D+Y KC  ++     F   P+++ ++W T+I GY Q     
Sbjct: 376 AYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHL 435

Query: 427 KAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALI 486
            A+ +  K+  E++    +   S+L AC+ L + +   ++H   +K     D+++ NA++
Sbjct: 436 DALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGL-ADILIQNAIV 494

Query: 487 DMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNL 546
           ++Y +   +  AR VF+ +N  + VSW +MI+    +GL+ E L++F+ + +    P+ +
Sbjct: 495 NVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLI 554

Query: 547 TFVGVLSACSNGGLLEQGEAYFKSMV-ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
           T V VL A +    L++G+     ++   + +E  I +  S+V +  R G ++ A  +  
Sbjct: 555 TLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIAN--SLVDMYARCGTMENARNIFN 612

Query: 606 GIPFQPSVMIWRALLGACIIH 626
            +  Q  +++W +++ A  +H
Sbjct: 613 YVK-QRDLILWTSMINANGMH 632



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 129/492 (26%), Positives = 242/492 (49%), Gaps = 25/492 (5%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N++++ ++LQ+C     ++    IH  +LK  +  D++ +N L+ +Y    ++ DA +
Sbjct: 248 ESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAER 307

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +F  M  ++ +S+ T + G   +  + +A+  F  +   G +  P   +    +  S   
Sbjct: 308 VFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQK--PDQVSVLNMIAASGRS 365

Query: 173 AELCPCVFACVYKLGH--DSNAFVGTALIDAFSVCGCVEFARKVFDGL------------ 218
           A L   +    Y + H  DSN  +G +LID +  C CV++    F+ +            
Sbjct: 366 ANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTII 425

Query: 219 ----FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
                N+C  +ALN   +++      +      +L AC GL + ++ K  HG  LK    
Sbjct: 426 AGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGL- 484

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
            D+ +  A++++Y +   +  AR +FE +  KD++ W+ MI       L+I+A+ELF  +
Sbjct: 485 ADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSL 544

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
            +  + P+  T VSVL A A +  L  G +IH  ++R G   +  ++N+L+D+YA+CG M
Sbjct: 545 IETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTM 604

Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
           EN+  +F    +R+ + W +MI      G    A+ +FSKM +E V    +T+ ++L AC
Sbjct: 605 ENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYAC 664

Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEV 511
           +    +  G Q H   +K  Y ++    +   L+D+ A+  S+ +A   V +M  + +  
Sbjct: 665 SHSGLVVEGKQ-HFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAE 723

Query: 512 SWNAMISGYSMH 523
            W A++    +H
Sbjct: 724 VWCALLGACRIH 735


>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
 gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
          Length = 637

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 241/637 (37%), Positives = 356/637 (55%), Gaps = 29/637 (4%)

Query: 198 LIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPN 241
           ++ A+S  G +   RK FD +                 N  F+    FF  M   G  P 
Sbjct: 1   MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
               +  L AC     I + +S     L T  E +  V  AL+ +Y K G  ++A  +F 
Sbjct: 61  EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFL 120

Query: 302 EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL 361
            M  +DV+ WS M+A YA+     +A+ LF +M    VAPN+ T VS L ACA++  L  
Sbjct: 121 RMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRS 180

Query: 362 GNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQ 421
           G  +H  V   G+ S V V  AL+++Y KCGR+E +VE F +  ++N V W+ +   Y +
Sbjct: 181 GALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYAR 240

Query: 422 LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLT--VKANYDMDV 479
                 A+ +  +M  E +     T+ SVL ACA++AAL+ G ++H  T  +    + DV
Sbjct: 241 NDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDV 300

Query: 480 VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
            V  AL++MY+KCG++  A  +FD +   + V WN++I+  + HG + + L++F+ M+  
Sbjct: 301 YVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLE 360

Query: 540 GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDK 599
           G +P  +TF  VL ACS+ G+L+QG  +F S + ++GI P  EH+  MV LLGRAG +  
Sbjct: 361 GLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVD 420

Query: 600 AAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAM 659
           +  L+  +PF+P  + W A LGAC  + N++    +A+++   +P   A +VLLSN+YA 
Sbjct: 421 SEDLLLHMPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDPRKRAPYVLLSNMYAK 480

Query: 660 ARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMK 708
           A  W   A            KE G SWIE +  VH F +GD  H  +  I   L+ L   
Sbjct: 481 AGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLTKL 540

Query: 709 SRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDC 768
            ++AGY+PD   VL DV+++ KE  +  HSEKLA+AFAL   P  SPIR++KNLR+C DC
Sbjct: 541 MKEAGYVPDTEMVLHDVKQEVKEIMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRVCNDC 600

Query: 769 HTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           HTA K ISK+V REI++RD +RFH FQ+G CSCGD+W
Sbjct: 601 HTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 637



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 124/443 (27%), Positives = 204/443 (46%), Gaps = 22/443 (4%)

Query: 97  LLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELN 156
           +L+ Y ++  +P   K FDEMP  + +S+   I  Y  +  F      F  +  +G    
Sbjct: 1   MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60

Query: 157 PFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD 216
               + FL          +   +   +   G +  + V TAL+  +   G    A  VF 
Sbjct: 61  EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFL 120

Query: 217 GLF----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRV 260
            +                 N    EAL  F QM   G  PN  T    L AC  L  +R 
Sbjct: 121 RMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRS 180

Query: 261 AKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQ 320
               H        +  + V  AL++LY K G I  A   F ++ +K+V+ WS + A YA+
Sbjct: 181 GALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYAR 240

Query: 321 TDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIH--SLVVRVGLLSDV 378
            D + DA+ +  RM    + PN  TFVSVL ACA +  L  G +IH  + V+  GL SDV
Sbjct: 241 NDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDV 300

Query: 379 FVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE 438
           +V  AL+++Y+KCG +  + ++F +    + V WN++I    Q G+  KA+ +F +M  E
Sbjct: 301 YVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLE 360

Query: 439 QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM--DVVVANALIDMYAKCGSIT 496
            +  T +T++SVL AC+    L+ G + H ++   ++ +  +      ++D+  + G I 
Sbjct: 361 GLQPTIITFTSVLFACSHAGMLDQGRK-HFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIV 419

Query: 497 DAR-LVFDMMNDWNEVSWNAMIS 518
           D+  L+  M  + + V+W A + 
Sbjct: 420 DSEDLLLHMPFEPHPVAWMAFLG 442



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 164/370 (44%), Gaps = 20/370 (5%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L +C    ++    +I   +L  G   +      L+++Y KL    DA  +F  M  R+ 
Sbjct: 68  LSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRMSHRDV 127

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +++   +  Y  +    EA+GLF  +  +G   N     + L    S+G       +   
Sbjct: 128 VAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQR 187

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEA 226
           V   G  S   VGTAL++ +  CG +E A + F  +                 ND   +A
Sbjct: 188 VEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRDA 247

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAH--GCALKTCYEMDLYVAVALL 284
           +    +M   G  PN+ TF  VL AC  +  ++  +  H     L    E D+YV  AL+
Sbjct: 248 IRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALV 307

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
           ++Y+K G ++ A  +F+++   D++ W+ +IA  AQ   +  A+ELF RMR   + P   
Sbjct: 308 NMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTII 367

Query: 345 TFVSVLQACATMEGLDLGNQ-IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
           TF SVL AC+    LD G +   S +   G+  +      ++D+  + G + +S +L   
Sbjct: 368 TFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLH 427

Query: 404 SPKRNH-VTW 412
            P   H V W
Sbjct: 428 MPFEPHPVAW 437



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 95/216 (43%), Gaps = 18/216 (8%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +  + L +C    DL++   +H +V  +G    +     L+N+Y K  R+  A + F
Sbjct: 161 NKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAF 220

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
            ++ E+N +++      Y  + +  +A+ +   +  EG   N   F + L    ++   +
Sbjct: 221 GQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALK 280

Query: 175 LCPCVFACVYKLGH--DSNAFVGTALIDAFSVCGCVEFARKVFDG-------LFNDCF-- 223
               +      LG   +S+ +V TAL++ +S CG +  A  +FD        L+N     
Sbjct: 281 QGRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIAT 340

Query: 224 -------EEALNFFSQMRAVGFKPNNFTFAFVLKAC 252
                  E+AL  F +MR  G +P   TF  VL AC
Sbjct: 341 NAQHGQTEKALELFERMRLEGLQPTIITFTSVLFAC 376


>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25060, mitochondrial-like [Vitis vinifera]
          Length = 678

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 239/648 (36%), Positives = 370/648 (57%), Gaps = 33/648 (5%)

Query: 186 LGH-DSNAFVGTALIDAFSVCGCVEFARKVFD-----GL-----------FNDCFEEALN 228
            GH +SNA     LI +++  G +E AR+VFD     G+                 EAL+
Sbjct: 36  FGHGNSNA----KLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALS 91

Query: 229 FFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYT 288
            + +M + G +P++ T+  VLKAC     +R  +     A+   Y  D++V  A+L+LY 
Sbjct: 92  LYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYA 151

Query: 289 KSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVS 348
           K G++  A R+F++M ++D++ W+ MI   AQ   + +AV+++ +M +  V  +    + 
Sbjct: 152 KCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLG 211

Query: 349 VLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRN 408
           ++QAC T+    +G  IH  ++R  ++ DV V  +L+D+YAK G +E +  +F     +N
Sbjct: 212 LIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKN 271

Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHC 468
            ++W+ +I G+ Q G  G A+ +   M         V+  SVL AC+ +  L+ G  VH 
Sbjct: 272 VISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHG 331

Query: 469 LTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAE 528
             V+     D V + A+IDMY+KCGS++ AR VFD ++  + +SWNA+I+ Y +HG   E
Sbjct: 332 YIVR-RLHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEE 390

Query: 529 VLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMV 588
            L +F  M++   +P++ TF  +LSA S+ GL+E+G  +F  MV  Y I+P  +HY  MV
Sbjct: 391 ALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMV 450

Query: 589 SLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEA 648
            LL RAG +++A +LIE +  +P + IW ALL  C+ H    IG ++A+ +L+  P+D  
Sbjct: 451 DLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVLELNPDDPG 510

Query: 649 THVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNI 697
            + L+SN +A AR W++ A            K PG S +E  G +H F   D SH     
Sbjct: 511 IYSLVSNFFATARRWDEVAEVRKIMKKTGMKKVPGYSVMEVNGKLHAFLMEDKSHHQYEE 570

Query: 698 IRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIR 757
           I  +L  L+ + +  GY+P    VL ++ E+ KER L  HSE+LA+AF L    P + + 
Sbjct: 571 IMQVLGKLDYEMKAMGYVPKTEFVLHNLEEEVKERMLCNHSERLAIAFGLLNTGPGTRLL 630

Query: 758 IIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           I KNLR+C DCH A K ISKIV REI++RDV RFHHF+DG CSCGD+W
Sbjct: 631 ITKNLRVCGDCHEATKFISKIVNREIVVRDVKRFHHFKDGVCSCGDYW 678



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 182/364 (50%), Gaps = 18/364 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +S +Y   L++C ++ DL++      Q + +G   D+F    +LN+Y K  ++ +A ++F
Sbjct: 104 DSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVF 163

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D+M  R+ + + T I G   + Q  EAV ++  +H++  E +       ++   ++G ++
Sbjct: 164 DKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSK 223

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF---------------DGLF 219
           +   +   + +     +  V T+L+D ++  G +E A  VF                G  
Sbjct: 224 MGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFA 283

Query: 220 NDCFE-EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            + F   AL     M++ G+KP++ +   VL AC  +  +++ KS HG  ++  +  D  
Sbjct: 284 QNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRRLH-FDCV 342

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
            + A++D+Y+K G +S AR +F+++  +D I W+ +IA Y       +A+ LF +MR+  
Sbjct: 343 SSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETN 402

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALM-DVYAKCGRMENS 397
           V P+  TF S+L A +    ++ G    S++V    +       A M D+ ++ GR+E +
Sbjct: 403 VKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEA 462

Query: 398 VELF 401
            EL 
Sbjct: 463 QELI 466



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 136/257 (52%), Gaps = 2/257 (0%)

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
           +IH+L++  G+      +  L+  YA+ G +E++ ++F +SP+     WN MI+ Y + G
Sbjct: 25  KIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRG 84

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN 483
            + +A+ ++ +M  E V     TY+ VL+AC     L  G +     V   Y  DV V  
Sbjct: 85  AMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGA 144

Query: 484 ALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRP 543
           A++++YAKCG + +A  VFD M   + V W  MI+G + +G + E + ++  M ++    
Sbjct: 145 AVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEG 204

Query: 544 NNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKL 603
           + +  +G++ AC+  G  + G +    M+    I   I   TS+V +  + GHL+ A+ +
Sbjct: 205 DGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQ-TSLVDMYAKNGHLELASCV 263

Query: 604 IEGIPFQPSVMIWRALL 620
              + ++ +V+ W AL+
Sbjct: 264 FRRMLYK-NVISWSALI 279


>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
 gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
          Length = 879

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 265/764 (34%), Positives = 408/764 (53%), Gaps = 30/764 (3%)

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
           L+    IH  +       D + +  LL++Y K + + DA K+FD +  +  + +   I  
Sbjct: 116 LEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITA 175

Query: 132 YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDS- 190
           Y       +A+ +F  +  EG +     F   L     +   E+   V  CV +  HD  
Sbjct: 176 YAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHL 235

Query: 191 -NAFVGTALIDAFSVCGCVE-----FARKVFDGLF----------NDCFEEALNFFSQMR 234
            ++   TAL++ +  CG +E     F+R   + +            + ++EAL  F  M 
Sbjct: 236 HDSSFATALVNFYGSCGDLEQAFRAFSRHRLELILATAMITQYTQRERWDEALELFKVML 295

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
             G K +      VL AC G   +   +  HG   +  ++  +    AL+++Y K G + 
Sbjct: 296 LEGVKLDRIACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLE 355

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
            A  +F  M  +DVI W+ +IA + Q     +A+ L   M+   V  ++ +FV+ L  CA
Sbjct: 356 EAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCA 415

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
           T E L  G  IHS +V  G+ +DV + NA++D+Y  C   +++  +F     R+ V+WN 
Sbjct: 416 TSEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVSWNA 475

Query: 415 MIVGYV-QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
           MI  Y  Q     +A+++F +M         +++ + L ACA+ A+L  G  +H    + 
Sbjct: 476 MITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRET 535

Query: 474 NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVF 533
             + ++ VANA+++MYAK G++  AR +F  M   + +SWN MIS ++ HG + +VL+ F
Sbjct: 536 GLESNMTVANAVLNMYAKSGTLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFF 595

Query: 534 DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY-GIEPCIEHYTSMVSLLG 592
             M   G  PN++TFV V+SACS+GGL++ G   F S++ ++  I P  EHY  MV L+ 
Sbjct: 596 RRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIA 655

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVL 652
           RAG LD A K I   P +P  +I   +LGA  +H +VE  R SA+H+++  P+  A +V+
Sbjct: 656 RAGKLDAAEKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAYVV 715

Query: 653 LSNIY---------AMARS--WEKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGM 701
           LSN+Y         A  R   +EK   KEP  S I  +  VH F  GDT++A    I   
Sbjct: 716 LSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTNARTPEILEE 775

Query: 702 LEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKN 761
           LE L+++  KAGY PD + +L DV +++K+R L  HSEKLA+AF L    P + +RIIKN
Sbjct: 776 LERLSLEMAKAGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTAPGTSLRIIKN 835

Query: 762 LRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           LR+C DCHTA K ISKI  REI++RD HRFHHF +G CSCGD+W
Sbjct: 836 LRVCGDCHTATKFISKITGREIVVRDSHRFHHFDNGTCSCGDYW 879



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 169/592 (28%), Positives = 282/592 (47%), Gaps = 23/592 (3%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           YA  L     +  L     +H ++ K       F  ++L+ +YV    L DA   FD MP
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVL-VSMGWAELCP 177
            ++ +++   I+ +       +A+ LF ++  EG       F A L          E   
Sbjct: 61  VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN----------------D 221
            +   +     +S+ +V T L+  +  C  VE ARKVFDG+ +                D
Sbjct: 121 RIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQD 180

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE--MDLYV 279
             E+A+  F  M   G K    TF  VL AC  L  + VAK    C  +  ++   D   
Sbjct: 181 HHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSF 240

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
           A AL++ Y   G++  A R F    + ++I  + MI +Y Q +   +A+ELF  M    V
Sbjct: 241 ATALVNFYGSCGDLEQAFRAFSRH-RLELILATAMITQYTQRERWDEALELFKVMLLEGV 299

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
             ++   ++VL AC+   GL+ G  IH  +  +     V   NAL+++Y KCG +E +VE
Sbjct: 300 KLDRIACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVE 359

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +F     R+ ++WNT+I  + Q  +  +A+ +   M  + V A ++++ + L  CA+  A
Sbjct: 360 VFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSEA 419

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
           L  G  +H   V++    DV++ NA++DMY  C S  DA  VF  M   ++VSWNAMI+ 
Sbjct: 420 LAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVSWNAMITA 479

Query: 520 YSMHG-LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           Y+    LS+E L +F  MQ  G+ P+ ++FV  LSAC+    L +G+      +   G+E
Sbjct: 480 YAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGK-LLHDRIRETGLE 538

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
             +    +++++  ++G L  A K+   +P  P V+ W  ++ A   H + +
Sbjct: 539 SNMTVANAVLNMYAKSGTLVLARKMFGKMPL-PDVISWNGMISAFAQHGHAD 589



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 140/504 (27%), Positives = 226/504 (44%), Gaps = 29/504 (5%)

Query: 160 FTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--- 216
           +   L V+      +L   V A + K   D   F+G  L+  +  CG +  A+  FD   
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60

Query: 217 --------------GLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLG-LDTIRVA 261
                         G   D  E+AL+ F  M+  G  P N  F  VL AC    + +   
Sbjct: 61  VQDALTWARLIRAHGQIGDS-EQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEG 119

Query: 262 KSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQT 321
           +  HG    T  E D YV+  LL +Y K   + +AR++F+ +  K V+ W+ MI  YAQ 
Sbjct: 120 RRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQ 179

Query: 322 DLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV--GLLSDVF 379
           D    A+++F  M    V   + TF+ VL AC+ ++ L++   +   V       L D  
Sbjct: 180 DHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSS 239

Query: 380 VSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ 439
            + AL++ Y  CG +E +   F+   +   +    MI  Y Q     +A+ +F  ML E 
Sbjct: 240 FATALVNFYGSCGDLEQAFRAFSRH-RLELILATAMITQYTQRERWDEALELFKVMLLEG 298

Query: 440 VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR 499
           V    +   +VL AC+    LE G  +H    +  +D  V   NALI+MY KCGS+ +A 
Sbjct: 299 VKLDRIACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAV 358

Query: 500 LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGG 559
            VF  M   + +SWN +I+ +  H    E L +  LMQ  G + + ++FV  L  C+   
Sbjct: 359 EVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSE 418

Query: 560 LLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRAL 619
            L +G     S +   GI+  +    +++ + G     D A+++   +  +  V  W A+
Sbjct: 419 ALAKGR-MIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVS-WNAM 476

Query: 620 LGACIIHNNVEIGRLSAQHILDFE 643
           + A          RLS++ +L F+
Sbjct: 477 ITAYAAQP-----RLSSEALLLFQ 495



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 116/442 (26%), Positives = 202/442 (45%), Gaps = 12/442 (2%)

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
           +A +L       ++ + K  H    K+  +   ++   L+ +Y   G + +A+  F+ MP
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC-ATMEGLDLGN 363
            +D + W+ +I  + Q   S  A+ LF  M+   VAP    FV+VL AC A  E L+ G 
Sbjct: 61  VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
           +IH ++    + SD +VS  L+ +Y KC  +E++ ++F     +  V WN MI  Y Q  
Sbjct: 121 RIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQD 180

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD--MDVVV 481
              +A+ +F  ML E V A  +T+  VL AC+ L  LE    V     +  +D   D   
Sbjct: 181 HHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSF 240

Query: 482 ANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW 541
           A AL++ Y  CG +  A   F   +    +   AMI+ Y+      E L++F +M   G 
Sbjct: 241 ATALVNFYGSCGDLEQAFRAFS-RHRLELILATAMITQYTQRERWDEALELFKVMLLEGV 299

Query: 542 RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAA 601
           + + +  + VL+ACS    LE+G       +     +  +    +++++ G+ G L++A 
Sbjct: 300 KLDRIACMAVLNACSGPRGLEEGR-IIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAV 358

Query: 602 KLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPED--EATHVLLSNIYAM 659
           ++   +  +  V+ W  ++ A   H+        A H+L     D  +A  +   N   +
Sbjct: 359 EVFRSMQHR-DVISWNTIIAAHGQHSQ----HPEALHLLHLMQLDGVKADKISFVNALPL 413

Query: 660 ARSWEKAASKEPGLSWIENQGM 681
             + E  A      SWI   G+
Sbjct: 414 CATSEALAKGRMIHSWIVESGI 435



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/292 (21%), Positives = 121/292 (41%), Gaps = 46/292 (15%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           S+  +L  C  ++ L     IH  +++ G   D+   N +L++Y       DA+++F  M
Sbjct: 406 SFVNALPLCATSEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAM 465

Query: 118 PERNTISFVTTIQGYTVSSQF-VEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
             R+ +S+   I  Y    +   EA+ LF  +   G   +  +F A L    +       
Sbjct: 466 KVRDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEG 525

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF-----------DGLF-----N 220
             +   + + G +SN  V  A+++ ++  G +  ARK+F           +G+      +
Sbjct: 526 KLLHDRIRETGLESNMTVANAVLNMYAKSGTLVLARKMFGKMPLPDVISWNGMISAFAQH 585

Query: 221 DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
              ++ L FF +M   G  PN+ TF  V+ AC           +HG  +K   +  L+V+
Sbjct: 586 GHADQVLRFFRRMNHEGKLPNDVTFVSVVSAC-----------SHGGLVKDGVQ--LFVS 632

Query: 281 V---------------ALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
           +                ++DL  ++G++  A +     P K D +  S M+ 
Sbjct: 633 LLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLG 684


>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
          Length = 675

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 239/628 (38%), Positives = 352/628 (56%), Gaps = 48/628 (7%)

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           AL  + +M ++G  PN+++F F+LK+C         +  H   LK    +D YV  +L+ 
Sbjct: 48  ALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLIS 107

Query: 286 LYTKSG-------------------------------EISNARRIFEEMPKKDVIPWSFM 314
           +Y ++G                               +  +AR++F+E+ ++DV+ W+ M
Sbjct: 108 MYARNGGLEDARKVFDASSHRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAM 167

Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV-- 372
           I  Y +     +A+ELF  M +  V P++ T VSV+ ACA    ++LG Q+HS V     
Sbjct: 168 ITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDD 227

Query: 373 --GLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMI 430
             G  S + + NAL+D+Y+KCG +E +  LF     ++ V+WNT+I GY       +A++
Sbjct: 228 DHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALL 287

Query: 431 MFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA--NYDMDVVVANALIDM 488
           +F +ML       +VT  SVL ACA L A++ G  +H    K       +  +  +LIDM
Sbjct: 288 LFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDM 347

Query: 489 YAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTF 548
           YAKCG I  A  VF+ M   +  SWNAMI G++MHG +     +F  M+     P+++TF
Sbjct: 348 YAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITF 407

Query: 549 VGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIP 608
           VG+LSACS+ GLL+ G   FKSM  +Y + P +EHY  M+ LLG +G   +A ++I  +P
Sbjct: 408 VGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMP 467

Query: 609 FQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE---- 664
            +P  +IW +LL AC  H N+E+    AQ ++  EPE+  ++VLLSNIYA A  WE    
Sbjct: 468 MEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVAR 527

Query: 665 -------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPD 717
                  K   K PG S IE   +VH F  GD  H     I  MLE ++++  +AG+ PD
Sbjct: 528 VRGVLNGKGMKKVPGCSSIEVDSVVHEFIIGDKLHPRRREIYHMLEEMDVQLEEAGFAPD 587

Query: 718 LSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISK 777
            S VL+++ E+ KE  L  HSEKLA+AF L    P + + I+KNLR+C +CH A K+ISK
Sbjct: 588 TSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISK 647

Query: 778 IVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           I +REI+ RD  RFHHF+DG CSC D+W
Sbjct: 648 IYKREIVARDRTRFHHFRDGVCSCCDYW 675



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/473 (27%), Positives = 215/473 (45%), Gaps = 55/473 (11%)

Query: 107 LPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV 166
           LP A  +F+ + E N + + T ++G+  SS  V A+ ++  +   GH  N ++F   LK 
Sbjct: 14  LPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKS 73

Query: 167 LVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------- 216
                  E    + A V KLG   + +V T+LI  ++  G +E ARKVFD          
Sbjct: 74  CAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSC 133

Query: 217 ----------GLF---------------------------NDCFEEALNFFSQMRAVGFK 239
                     G F                           N  +EEAL  F +M     +
Sbjct: 134 TALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVR 193

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC----YEMDLYVAVALLDLYTKSGEISN 295
           P+  T   V+ AC    +I + +  H           +   L +  AL+DLY+K G++  
Sbjct: 194 PDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVET 253

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACAT 355
           A  +FE +  KDV+ W+ +I  Y  T+L  +A+ LF  M ++   PN  T +SVL ACA 
Sbjct: 254 AFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAH 313

Query: 356 MEGLDLGNQIHSLVVR--VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
           +  +D+G  IH  + +   G+ ++  +  +L+D+YAKCG +E + ++F     R+  +WN
Sbjct: 314 LGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWN 373

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV-HCLTVK 472
            MI G+   G    A  +FS+M   +V   ++T+  +L AC+    L+ G Q+   +T  
Sbjct: 374 AMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQD 433

Query: 473 ANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHG 524
            N    +     +ID+    G   +A  ++  M  + + V W +++     HG
Sbjct: 434 YNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHG 486



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 181/417 (43%), Gaps = 55/417 (13%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD----- 109
           NS+S+   L+SC ++   +    IH QVLK G  LD +    L+++Y +   L D     
Sbjct: 63  NSYSFPFLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVF 122

Query: 110 --------------------------ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVG 143
                                     A K+FDE+ ER+ +S+   I GY  + ++ EA+ 
Sbjct: 123 DASSHRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALE 182

Query: 144 LFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKL----GHDSNAFVGTALI 199
           LF  + R     +     + +      G  EL   V + V       G  S+  +  ALI
Sbjct: 183 LFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALI 242

Query: 200 DAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNF 243
           D +S CG VE A  +F+GL                  + ++EAL  F +M   G  PN+ 
Sbjct: 243 DLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDV 302

Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEM--DLYVAVALLDLYTKSGEISNARRIFE 301
           T   VL AC  L  I + +  H    K    +  +  +  +L+D+Y K G+I  A ++F 
Sbjct: 303 TLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFN 362

Query: 302 EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL 361
            M  + +  W+ MI  +A    +  A +LF RMR   V P+  TFV +L AC+    LDL
Sbjct: 363 SMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDL 422

Query: 362 GNQI-HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMI 416
           G QI  S+     L   +     ++D+    G  + + E+    P + + V W +++
Sbjct: 423 GRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLL 479



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 123/267 (46%), Gaps = 36/267 (13%)

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           ++ +F    + N + WNTM+ G+    +   A+ M+ +M+         ++  +L++CA 
Sbjct: 17  AISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAK 76

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDM------------ 504
             A E G Q+H   +K    +D  V  +LI MYA+ G + DAR VFD             
Sbjct: 77  SKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTAL 136

Query: 505 -------------------MNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNN 545
                              + + + VSWNAMI+GY  +G   E L++F  M +   RP+ 
Sbjct: 137 ITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDE 196

Query: 546 LTFVGVLSACSNGGLLEQGE---AYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
            T V V+SAC+  G +E G    ++      ++G    ++   +++ L  + G ++ A  
Sbjct: 197 GTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFG 256

Query: 603 LIEGIPFQPSVMIWRALLGACIIHNNV 629
           L EG+  +  V+ W  L+G    H N+
Sbjct: 257 LFEGLSCK-DVVSWNTLIGG-YTHTNL 281



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 83/364 (22%), Positives = 148/364 (40%), Gaps = 72/364 (19%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLK----KGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           + +C Q+  ++    +H  V       G    L   N L+++Y K   +  A  LF+ + 
Sbjct: 203 VSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLS 262

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
            ++ +S+ T I GYT ++ + EA+ LF  + R G   N     + L     +G  ++   
Sbjct: 263 CKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRW 322

Query: 179 VFACVYK--LGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEE----------- 225
           +   + K   G  +   + T+LID ++ CG +E A +VF+ +                  
Sbjct: 323 IHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMH 382

Query: 226 -----ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
                A + FS+MR    +P++ TF  +L AC           +H               
Sbjct: 383 GRANAAFDLFSRMRGNRVEPDDITFVGLLSAC-----------SHS-------------- 417

Query: 281 VALLDLYTKSGEISNARRIFEEMPKK-DVIP----WSFMIARYAQTDLSIDAVELFCRMR 335
             LLDL          R+IF+ M +  ++ P    +  MI     + L  +A E+   M 
Sbjct: 418 -GLLDL---------GRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMP 467

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV---GLLSDVFVSNALMDVYAKCG 392
              + P+   + S+L+AC     L+L       ++++      S V +SN    +YA  G
Sbjct: 468 ---MEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYVLLSN----IYATAG 520

Query: 393 RMEN 396
           R E+
Sbjct: 521 RWED 524


>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
 gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
          Length = 742

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 253/749 (33%), Positives = 399/749 (53%), Gaps = 50/749 (6%)

Query: 100 VYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFA 159
           +Y   +   DA   FD + +RN  S+   +  + +S Q  E +     + ++G  + P A
Sbjct: 1   MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDG--VRPDA 58

Query: 160 FTAFLKVLVSMGWAELCPCVFACVYKLGHDS----NAFVGTALIDAFSVCGCVEFARKVF 215
            T F+  L S G  E        ++++  DS    +  V  AL++ +  CG +  A++VF
Sbjct: 59  VT-FITALGSCGDPESLRDGIR-IHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVF 116

Query: 216 DGL-----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTI 258
             +                  +    EAL  F  M  +G K        +L AC     +
Sbjct: 117 AKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALV 176

Query: 259 RVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPK--KDVIPWSFMIA 316
           +  +  H C   + +E +L VA A++ +Y + G +  AR++F+ M +  +DV+ W+ M++
Sbjct: 177 QDGRMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLS 236

Query: 317 RYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLS 376
            Y   D   DA++L+ RM+   + P++ T+VS+L AC++ E + LG  +H  +V   L  
Sbjct: 237 TYVHNDRGKDAIQLYQRMQ---LRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEK 293

Query: 377 DVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML 436
           +V V NAL+ +YAKCG    +  +F +  +R+ ++W T+I  YV+   V +A  +F +ML
Sbjct: 294 NVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQML 353

Query: 437 E-------EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMY 489
           E       ++V    + + ++L ACA ++ALE G  V           D  V  A++++Y
Sbjct: 354 ELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLY 413

Query: 490 AKCGSITDARLVFDMMNDWNEVS-WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTF 548
            KCG I +AR +FD +    +V  WNAMI+ Y+  G S E LK+F  M+  G RP++ +F
Sbjct: 414 GKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSF 473

Query: 549 VGVLSACSNGGLLEQGEAYFKSMVANY-GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGI 607
           V +L ACS+ GL +QG++YF SM   Y  +   I+H+  +  LLGR G L +A + +E +
Sbjct: 474 VSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKL 533

Query: 608 PFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW---- 663
           P +P  + W +LL AC  H +++  +  A  +L  EP     +V LSNIYA  + W    
Sbjct: 534 PVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVA 593

Query: 664 -------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIP 716
                  E+   KE G+S IE    +H F  GD +H     IR  L  L+ + ++ GY+P
Sbjct: 594 KVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKECGYVP 653

Query: 717 DLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIIS 776
           D   VL  V E EKER L+ HSE+LA+A  L   P  +P+R+ KNLR+C DCHTA K+IS
Sbjct: 654 DTKMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLIS 713

Query: 777 KIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           KI  R+I++RD  RFH F+DG CSC D+W
Sbjct: 714 KIAGRKIVVRDPTRFHLFKDGKCSCQDYW 742



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 124/496 (25%), Positives = 222/496 (44%), Gaps = 33/496 (6%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           ++ T+L SC   + L+  + IH  V+     +D   +N LLN+Y K   L  A ++F +M
Sbjct: 60  TFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKM 119

Query: 118 PE-RNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
              RN IS+      + +     EA+  F  +   G +    A    L    S    +  
Sbjct: 120 ERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDG 179

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL------------------ 218
             + +C+   G +S   V  A++  +  CG VE ARKVFD +                  
Sbjct: 180 RMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYV 239

Query: 219 FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            ND  ++A+  + +M+    +P+  T+  +L AC   + + + +  H   +    E ++ 
Sbjct: 240 HNDRGKDAIQLYQRMQ---LRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVI 296

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ-- 336
           V  AL+ +Y K G  + AR +F++M ++ +I W+ +I+ Y +  L  +A  LF +M +  
Sbjct: 297 VGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELE 356

Query: 337 -----AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC 391
                  V P+   FV++L ACA +  L+ G  +       GL SD  V  A++++Y KC
Sbjct: 357 KNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKC 416

Query: 392 GRMENSVELFAESPKRNHVT-WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
           G +E +  +F     R  V  WN MI  Y Q G+  +A+ +F +M  E V     ++ S+
Sbjct: 417 GEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSI 476

Query: 451 LRACASLAALEPGMQ--VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN-D 507
           L AC+     + G        T   N    +     + D+  + G + +A    + +   
Sbjct: 477 LLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVK 536

Query: 508 WNEVSWNAMISGYSMH 523
            + V+W ++++    H
Sbjct: 537 PDAVAWTSLLAACRNH 552


>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Glycine max]
          Length = 673

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 256/703 (36%), Positives = 381/703 (54%), Gaps = 63/703 (8%)

Query: 132 YTVSSQFVEAVGLFSTLHRE-GHELNPFAFTAFL-KVLVSMGWAELCPCVFACVYKLGHD 189
           + ++ QF +   L S++ +      NP      L KVL      +    V + V+ L   
Sbjct: 5   HPLTHQFPKLQALVSSIRKSLVSPQNPVLVLELLGKVLDQYPDIKTLKNVHSKVFNLSFH 64

Query: 190 SNAFVGTALIDAFSVCGCVEFARKVFD----------------GLFNDCFEEALNFFSQM 233
            N  +G  L+ A++  G    AR VFD                 + N  +++AL  F  M
Sbjct: 65  ENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVFRDM 124

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
            + GF P+++T+  VLKAC   D +R+    HG   K   +++L+V   L+ LY K G +
Sbjct: 125 VSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCL 184

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
             AR + +EM  KDV+ W+ M+A YAQ     DA+++   M      P+  T  S+L A 
Sbjct: 185 PEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPA- 243

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
                                +++    N L   Y +        E+F    K++ V+WN
Sbjct: 244 ---------------------VTNTSSENVL---YVE--------EMFMNLEKKSLVSWN 271

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
            MI  Y++    GK++ ++ +M + +V    +T +SVLRAC  L+AL  G ++H    + 
Sbjct: 272 VMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERK 331

Query: 474 NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVF 533
               ++++ N+LIDMYA+CG + DA+ VFD M   +  SW ++IS Y M G     + +F
Sbjct: 332 KLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALF 391

Query: 534 DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGR 593
             MQ  G  P+++ FV +LSACS+ GLL +G+ YFK M  +Y I P IEH+  +V LLGR
Sbjct: 392 TEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGR 451

Query: 594 AGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLL 653
           +G +D+A  +I+ +P +P+  +W ALL +C +++N++IG L+A  +L   PE+   +VLL
Sbjct: 452 SGRVDEAYNIIKQMPMKPNERVWGALLSSCRVYSNMDIGILAADKLLQLAPEESGYYVLL 511

Query: 654 SNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGML 702
           SNIYA A  W +  +           K PG+S +E    VH F AGDT H     I   L
Sbjct: 512 SNIYAKAGRWTEVTAIRSLMKRRRIRKMPGISNVELNNQVHTFLAGDTYHPQSKEIYEEL 571

Query: 703 EWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNL 762
             L  K ++ GY+P   + L DV E++KE +L VHSEKLA+ FA+      SPIRI KNL
Sbjct: 572 SVLVGKMKELGYVPKTDSALHDVEEEDKECHLAVHSEKLAIVFAILNT-QESPIRITKNL 630

Query: 763 RICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           R+C DCH A K+ISKIVQREI+IRD +RFHHF+DG CSCGD+W
Sbjct: 631 RVCGDCHIAAKLISKIVQREIVIRDTNRFHHFKDGICSCGDYW 673



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 113/454 (24%), Positives = 204/454 (44%), Gaps = 21/454 (4%)

Query: 68  QNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVT 127
           Q  D++T   +H +V       +      L+  Y        A  +FD +PERN I +  
Sbjct: 44  QYPDIKTLKNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNV 103

Query: 128 TIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLG 187
            I+ Y  +  + +A+ +F  +   G   + + +   LK         +   +   V+K+G
Sbjct: 104 MIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVG 163

Query: 188 HDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAF 247
            D N FVG  LI  +  CGC+  AR V D +      ++ +  S    V     N  F  
Sbjct: 164 LDLNLFVGNGLIALYGKCGCLPEARCVLDEM------QSKDVVSWNSMVAGYAQNMQFDD 217

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
            L  C  +D +R    A       C    L  AV      T S  +     +F  + KK 
Sbjct: 218 ALDICREMDGVRQKPDA-------CTMASLLPAVT----NTSSENVLYVEEMFMNLEKKS 266

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
           ++ W+ MI+ Y +  +   +V+L+ +M +  V P+  T  SVL+AC  +  L LG +IH 
Sbjct: 267 LVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHE 326

Query: 368 LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK 427
            V R  L  ++ + N+L+D+YA+CG +E++  +F     R+  +W ++I  Y   G+   
Sbjct: 327 YVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYN 386

Query: 428 AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--AL 485
           A+ +F++M         + + ++L AC+    L  G + +   +  +Y +  ++ +   L
Sbjct: 387 AVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEG-KFYFKQMTDDYKITPIIEHFACL 445

Query: 486 IDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMIS 518
           +D+  + G + +A  ++  M    NE  W A++S
Sbjct: 446 VDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLS 479



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/364 (23%), Positives = 168/364 (46%), Gaps = 19/364 (5%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           + ++Y   L++C  +D+L+  + +H  V K G  L+LF  N L+ +Y K   LP+A  + 
Sbjct: 132 DHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVL 191

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           DEM  ++ +S+ + + GY  + QF +A+ +   +  +G    P A T           A 
Sbjct: 192 DEMQSKDVVSWNSMVAGYAQNMQFDDALDICREM--DGVRQKPDACT----------MAS 239

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMR 234
           L P V           N      +         V +   +   + N    ++++ + QM 
Sbjct: 240 LLPAVTNT-----SSENVLYVEEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMG 294

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
               +P+  T A VL+AC  L  + + +  H    +     ++ +  +L+D+Y + G + 
Sbjct: 295 KCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLE 354

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
           +A+R+F+ M  +DV  W+ +I+ Y  T    +AV LF  M+ +  +P+   FV++L AC+
Sbjct: 355 DAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACS 414

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNA-LMDVYAKCGRMENSVELFAESP-KRNHVTW 412
               L+ G      +     ++ +    A L+D+  + GR++ +  +  + P K N   W
Sbjct: 415 HSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVW 474

Query: 413 NTMI 416
             ++
Sbjct: 475 GALL 478



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 101/250 (40%), Gaps = 20/250 (8%)

Query: 60  ATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPE 119
           A+ L++C     L     IH  V +K  C ++   N L+++Y +   L DA ++FD M  
Sbjct: 306 ASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKF 365

Query: 120 RNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCV 179
           R+  S+ + I  Y ++ Q   AV LF+ +   G   +  AF A L               
Sbjct: 366 RDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILS-------------- 411

Query: 180 FACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDC-FEEALNFFSQMRAVGF 238
            AC +    +   F    + D + +   +E    + D L      +EA N   QM     
Sbjct: 412 -ACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQM---PM 467

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
           KPN   +  +L +C     + +   A    L+   E   Y  V L ++Y K+G  +    
Sbjct: 468 KPNERVWGALLSSCRVYSNMDIGILAADKLLQLAPEESGYY-VLLSNIYAKAGRWTEVTA 526

Query: 299 IFEEMPKKDV 308
           I   M ++ +
Sbjct: 527 IRSLMKRRRI 536


>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 254/725 (35%), Positives = 399/725 (55%), Gaps = 36/725 (4%)

Query: 31  QAALSTQQCSNSTTTPITFSVSEFNSH----SYATSLQSCIQNDDLQTAMTIHCQVLKK- 85
            +A+     ++   TP +  V + +SH         L+ C+    L+ A T+H  +LK  
Sbjct: 39  HSAIQKPFATSGIKTPNSVKVDKTDSHLQIQPLVDLLRDCVDARFLKQAKTVHGFLLKSK 98

Query: 86  -GNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGL 144
             N   L   N + + Y K + +  A +LFD+M +RNT S+   I G   +  F++    
Sbjct: 99  FSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEF 158

Query: 145 FSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSV 204
           F  +  +G   + FA++  L++ + +   EL   V A +   G  S+ FV TAL++ ++ 
Sbjct: 159 FCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAK 218

Query: 205 CGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFV 248
              +E + KVF+ +                 ND + +A + F +M   G  P+  TF  V
Sbjct: 219 LQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGV 278

Query: 249 LKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEE--MPKK 306
            KA   L  +  AK   G AL+   + +  V  AL+D+ +K G +  AR IF    +  +
Sbjct: 279 AKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCR 338

Query: 307 DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIH 366
              PW+ MI+ Y ++  +  A+ELF +M Q  +  + +T+ SV  A A ++ L LG ++H
Sbjct: 339 FNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVH 398

Query: 367 SLVVRVGL-LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEV 425
           +  ++ GL ++ V +SNA+ + YAKCG +E+  ++F     R+ ++W +++  Y Q  E 
Sbjct: 399 ARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEW 458

Query: 426 GKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANAL 485
            KA+ +FS M  E +   + T+SSVL +CA+L  LE G QVH +  K   DMD  + +AL
Sbjct: 459 DKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESAL 518

Query: 486 IDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNN 545
           +DMYAKCG + DA+ VF+ +++ + VSW A+I+G++ HG+  + L++F  M Q G  PN 
Sbjct: 519 VDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNA 578

Query: 546 LTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
           +TF+ VL ACS+GGL+E+G  YFK M   YG+ P +EHY  +V LL R GHL+ A + I 
Sbjct: 579 VTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFIS 638

Query: 606 GIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW-- 663
            +P +P+ M+W+ LLGAC +H NVE+G L+AQ IL F+ E+ AT+VLLSN Y  + S+  
Sbjct: 639 RMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYKD 698

Query: 664 ---------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGY 714
                    E+   KEPG SWI   G +H F AGD  H + + I   LE L +K      
Sbjct: 699 GLSLRHVMKEQGVKKEPGCSWISVNGTLHKFYAGDQQHPEKDKIYAKLEELKLKLISLDD 758

Query: 715 IPDLS 719
           +PDLS
Sbjct: 759 VPDLS 763


>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 254/725 (35%), Positives = 399/725 (55%), Gaps = 36/725 (4%)

Query: 31  QAALSTQQCSNSTTTPITFSVSEFNSH----SYATSLQSCIQNDDLQTAMTIHCQVLKK- 85
            +A+     ++   TP +  V + +SH         L+ C+    L+ A T+H  +LK  
Sbjct: 39  HSAIQKPFATSGIKTPNSVKVDKTDSHLQIQPLVDLLRDCVDARFLKQAKTVHGFLLKSK 98

Query: 86  -GNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGL 144
             N   L   N + + Y K + +  A +LFD+M +RNT S+   I G   +  F++    
Sbjct: 99  FSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEF 158

Query: 145 FSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSV 204
           F  +  +G   + FA++  L++ + +   EL   V A +   G  S+ FV TAL++ ++ 
Sbjct: 159 FCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAK 218

Query: 205 CGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFV 248
              +E + KVF+ +                 ND + +A + F +M   G  P+  TF  V
Sbjct: 219 LQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGV 278

Query: 249 LKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEE--MPKK 306
            KA   L  +  AK   G AL+   + +  V  AL+D+ +K G +  AR IF    +  +
Sbjct: 279 AKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCR 338

Query: 307 DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIH 366
              PW+ MI+ Y ++  +  A+ELF +M Q  +  + +T+ SV  A A ++ L LG ++H
Sbjct: 339 FNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVH 398

Query: 367 SLVVRVGL-LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEV 425
           +  ++ GL ++ V +SNA+ + YAKCG +E+  ++F     R+ ++W +++  Y Q  E 
Sbjct: 399 ARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEW 458

Query: 426 GKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANAL 485
            KA+ +FS M  E +   + T+SSVL +CA+L  LE G QVH +  K   DMD  + +AL
Sbjct: 459 DKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESAL 518

Query: 486 IDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNN 545
           +DMYAKCG + DA+ VF+ +++ + VSW A+I+G++ HG+  + L++F  M Q G  PN 
Sbjct: 519 VDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNA 578

Query: 546 LTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
           +TF+ VL ACS+GGL+E+G  YFK M   YG+ P +EHY  +V LL R GHL+ A + I 
Sbjct: 579 VTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFIS 638

Query: 606 GIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW-- 663
            +P +P+ M+W+ LLGAC +H NVE+G L+AQ IL F+ E+ AT+VLLSN Y  + S+  
Sbjct: 639 RMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYKD 698

Query: 664 ---------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGY 714
                    E+   KEPG SWI   G +H F AGD  H + + I   LE L +K      
Sbjct: 699 GLSLRHLMKEQGVKKEPGCSWISVNGTLHKFYAGDQQHPEKDKIYAKLEELKLKLISLDD 758

Query: 715 IPDLS 719
           +PDLS
Sbjct: 759 VPDLS 763


>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Cucumis sativus]
          Length = 673

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 231/593 (38%), Positives = 344/593 (58%), Gaps = 12/593 (2%)

Query: 224 EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
           +  +  +  M+     PN FTF +VLKAC G     + K  HG   K  +  +++V  +L
Sbjct: 82  DAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSL 141

Query: 284 LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
           + +Y K G+IS AR +F+++  + V+ W+ +I+ Y Q    ++A+ +F  MRQ  V P+ 
Sbjct: 142 VSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDW 201

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
              VSV+ A   +E L  G  IH LV ++GL  +  +  +L  +YAK G +E +   F  
Sbjct: 202 IALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNR 261

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
             K N + WN MI GY   G   +A+ +F +M+ + +    +T  S + A A + +LE  
Sbjct: 262 MEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELA 321

Query: 464 MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMH 523
             +     K+ Y  D  V   LIDMYAKCGSI  AR VFD + D + V W+ MI GY +H
Sbjct: 322 RWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLH 381

Query: 524 GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEH 583
           G   E + +++ M+Q G  PN+ TF+G+L+AC N GL+++G   F  M  ++GIEP  +H
Sbjct: 382 GHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLM-PDHGIEPHHQH 440

Query: 584 YTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFE 643
           Y+ +V LLGRAG+L++A   I  +P +P V +W ALL AC IH  V +G ++A+ +   +
Sbjct: 441 YSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILD 500

Query: 644 PEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSH 692
           P +   +V LSN+YA A  W           +K  +K+ G S IE  G +  F+ GD SH
Sbjct: 501 PYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSH 560

Query: 693 ADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPP 752
                I   L+ L  + + AGY+P + +VL D+  +E E  L  HSE+LA+A+ +    P
Sbjct: 561 PKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAP 620

Query: 753 SSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            + +RI KNLR C++CH+AIK+ISK+V REIIIRD  RFHHF+DG CSCGDFW
Sbjct: 621 GTTLRITKNLRACINCHSAIKLISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 673



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 148/272 (54%)

Query: 291 GEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVL 350
           G+++ A + F E+ + D++ W+ +I  Y Q ++    + ++  M+ + V PN FTF+ VL
Sbjct: 48  GDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVL 107

Query: 351 QACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHV 410
           +AC       +G QIH    + G  S+VFV N+L+ +YAK G++  +  +F +   R  V
Sbjct: 108 KACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVV 167

Query: 411 TWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLT 470
           +W ++I GYVQ G+  +A+ +F +M +  V    +   SV+ A  ++  L  G  +H L 
Sbjct: 168 SWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLV 227

Query: 471 VKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVL 530
            K   + +  +  +L  MYAK G +  AR  F+ M   N + WNAMISGY+ +G   E +
Sbjct: 228 TKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAI 287

Query: 531 KVFDLMQQRGWRPNNLTFVGVLSACSNGGLLE 562
           K+F  M  +  R +++T    + A +  G LE
Sbjct: 288 KLFREMITKNIRVDSITMRSAVLASAQVGSLE 319



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 109/448 (24%), Positives = 195/448 (43%), Gaps = 23/448 (5%)

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A K F E+ E + + +   I+GYT  +     + ++  +       N F F   LK    
Sbjct: 53  AHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGG 112

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF------ 223
                +   +    +K G  SN FV  +L+  ++  G + +AR VFD L +         
Sbjct: 113 TSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSI 172

Query: 224 ----------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY 273
                      EALN F +MR    KP+      V+ A   ++ +   KS HG   K   
Sbjct: 173 ISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGL 232

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
           E +  + ++L  +Y K G +  AR  F  M K ++I W+ MI+ YA      +A++LF  
Sbjct: 233 EFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFRE 292

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           M    +  +  T  S + A A +  L+L   +   + +     D FV+  L+D+YAKCG 
Sbjct: 293 MITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGS 352

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           +  +  +F     ++ V W+ MI+GY   G   +A+ ++++M +  V   + T+  +L A
Sbjct: 353 IYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTA 412

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVS 512
           C +   ++ G ++  L      +      + ++D+  + G +  A   +  M        
Sbjct: 413 CKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSV 472

Query: 513 WNAMISGYSMH------GLSAEVLKVFD 534
           W A++S   +H       ++AE L + D
Sbjct: 473 WGALLSACKIHRKVRLGEIAAEQLFILD 500



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 133/260 (51%), Gaps = 2/260 (0%)

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
           +Q++  ++  GL    F+    ++     G +  + + F E  + + + WN +I GY Q 
Sbjct: 19  DQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQK 78

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
             V   + M+  M   QV     T+  VL+AC   +    G Q+H  T K  +  +V V 
Sbjct: 79  NIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQ 138

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
           N+L+ MYAK G I+ AR+VFD ++D   VSW ++ISGY  +G   E L VF  M+Q   +
Sbjct: 139 NSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVK 198

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           P+ +  V V++A +N   L QG++    +V   G+E   +   S+ ++  + G L + A+
Sbjct: 199 PDWIALVSVMTAYTNVEDLGQGKS-IHGLVTKLGLEFEPDIVISLTTMYAKRG-LVEVAR 256

Query: 603 LIEGIPFQPSVMIWRALLGA 622
                  +P++++W A++  
Sbjct: 257 FFFNRMEKPNLILWNAMISG 276


>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
 gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 760

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 246/722 (34%), Positives = 379/722 (52%), Gaps = 97/722 (13%)

Query: 181 ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN----------------DCFE 224
           A + K G  ++ ++   LI ++S   C   A  V   + +                  F 
Sbjct: 39  ARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFT 98

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           +++  FS+M + G  P++     + K C  L   +V K  H  +  +  +MD +V  ++ 
Sbjct: 99  QSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMF 158

Query: 285 DLYTKSGEISNARRIFEEMPKKDVI----------------------------------- 309
            +Y + G + +AR++F+ M  KDV+                                   
Sbjct: 159 HMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIV 218

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
            W+ +++ + ++    +AV +F ++      P+Q T  SVL +    E L++G  IH  V
Sbjct: 219 SWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYV 278

Query: 370 VRVGLLSDVFVSNALMDVYAKCGR-------------MENSV------------------ 398
           ++ GLL D  V +A++D+Y K G              ME  V                  
Sbjct: 279 IKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKAL 338

Query: 399 ---ELFAESP-KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
              ELF E   + N V+W ++I G  Q G+  +A+ +F +M    V    VT  S+L AC
Sbjct: 339 EMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPAC 398

Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
            ++AAL  G   H   V+ +   +V V +ALIDMYAKCG I  +++VF+MM   N V WN
Sbjct: 399 GNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWN 458

Query: 515 AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
           ++++G+SMHG + EV+ +F+ + +   +P+ ++F  +LSAC   GL ++G  YFK M   
Sbjct: 459 SLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEE 518

Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL 634
           YGI+P +EHY+ MV+LLGRAG L +A  LI+ +PF+P   +W ALL +C + NNV++  +
Sbjct: 519 YGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEI 578

Query: 635 SAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVH 683
           +A+ +   EPE+  T+VLLSNIYA    W +  S           K PG SWI+ +  V+
Sbjct: 579 AAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVY 638

Query: 684 YFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLAL 743
              AGD SH  ++ I   ++ ++ + RK+G+ P+L   L DV E E+E+ LW HSEKLA+
Sbjct: 639 TLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAV 698

Query: 744 AFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGD 803
            F L   P  +P+++IKNLRIC DCH  IK IS    REI IRD +RFHHF+DG CSCGD
Sbjct: 699 VFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGD 758

Query: 804 FW 805
           FW
Sbjct: 759 FW 760



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 110/502 (21%), Positives = 206/502 (41%), Gaps = 89/502 (17%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +SH      + C +    +    IHC     G  +D F    + ++Y++  R+ DA K+F
Sbjct: 115 DSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVF 174

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D M +++ ++    +  Y       E V + S +   G E N  ++   L      G+ +
Sbjct: 175 DRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHK 234

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMR 234
               +F  ++ LG                                               
Sbjct: 235 EAVVMFQKIHHLG----------------------------------------------- 247

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
              F P+  T + VL +    + + + +  HG  +K     D  V  A++D+Y KSG + 
Sbjct: 248 ---FCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVY 304

Query: 295 NARRIF-----------------------------------EEMPKKDVIPWSFMIARYA 319
               +F                                   E+  + +V+ W+ +IA  A
Sbjct: 305 GIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCA 364

Query: 320 QTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVF 379
           Q    I+A+ELF  M+ A V PN  T  S+L AC  +  L  G   H   VRV LL +V 
Sbjct: 365 QNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVH 424

Query: 380 VSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ 439
           V +AL+D+YAKCGR+  S  +F   P +N V WN+++ G+   G+  + M +F  ++  +
Sbjct: 425 VGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTR 484

Query: 440 VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITD 497
           +    ++++S+L AC  +   + G +   + +   Y +   + +   ++++  + G + +
Sbjct: 485 LKPDFISFTSLLSACGQVGLTDEGWKYFKM-MSEEYGIKPRLEHYSCMVNLLGRAGKLQE 543

Query: 498 A-RLVFDMMNDWNEVSWNAMIS 518
           A  L+ +M  + +   W A+++
Sbjct: 544 AYDLIKEMPFEPDSCVWGALLN 565



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/370 (23%), Positives = 168/370 (45%), Gaps = 41/370 (11%)

Query: 264 AHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDL 323
           AH   LK+  + D Y++  L+  Y+     ++A  + + +P   +  +S +I    +  L
Sbjct: 37  AHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKL 96

Query: 324 SIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNA 383
              ++ +F RM    + P+     ++ + CA +    +G QIH +    GL  D FV  +
Sbjct: 97  FTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGS 156

Query: 384 LMDVYAKCGRMENSVELFAESPKR-----------------------------------N 408
           +  +Y +CGRM ++ ++F     +                                   N
Sbjct: 157 MFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEAN 216

Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHC 468
            V+WN ++ G+ + G   +A++MF K+        +VT SSVL +      L  G  +H 
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHG 276

Query: 469 LTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAE 528
             +K     D  V +A+IDMY K G +     +F+          NA I+G S +GL  +
Sbjct: 277 YVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDK 336

Query: 529 VLKVFDLMQQRGWRPNNLTFVGVLSACS-NGGLLEQGEAYFKSMVANYGIEPCIEHYTSM 587
            L++F+L +++    N +++  +++ C+ NG  +E  E + +  VA  G++P   ++ ++
Sbjct: 337 ALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVA--GVKP---NHVTI 391

Query: 588 VSLLGRAGHL 597
            S+L   G++
Sbjct: 392 PSMLPACGNI 401



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/261 (22%), Positives = 131/261 (50%), Gaps = 2/261 (0%)

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
           Q H+ +++ G  +D ++S  L+  Y+      ++  +    P     +++++I    +  
Sbjct: 36  QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN 483
              +++ +FS+M    +        ++ + CA L+A + G Q+HC++  +  DMD  V  
Sbjct: 96  LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155

Query: 484 ALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRP 543
           ++  MY +CG + DAR VFD M+D + V+ +A++  Y+  G   EV+++   M+  G   
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215

Query: 544 NNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKL 603
           N +++ G+LS  +  G  ++    F+  + + G  P     +S++  +G +  L+   +L
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQK-IHHLGFCPDQVTVSSVLPSVGDSEMLN-MGRL 273

Query: 604 IEGIPFQPSVMIWRALLGACI 624
           I G   +  ++  + ++ A I
Sbjct: 274 IHGYVIKQGLLKDKCVISAMI 294


>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
          Length = 813

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 258/751 (34%), Positives = 397/751 (52%), Gaps = 50/751 (6%)

Query: 101 YVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNP--F 158
           ++    L  A  LFD++P  +  ++   I+ Y+ SS    A GL        H + P  +
Sbjct: 67  HIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNY 126

Query: 159 AFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF--- 215
            F   LK   ++        +       G  ++ FV TAL+D +  C C+  A  +F   
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 186

Query: 216 -----------------DGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTI 258
                             G+++      L+   QM+    +PN  T   +L        +
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSM--QMQMHRLRPNASTLVALLPLLAQQGAL 244

Query: 259 RVAKSAHGCALKTCYEMD----------LYVAVALLDLYTKSGEISNARRIFEEMPKKDV 308
               S H   ++ C   +          + +  ALLD+Y K G +  ARR+F+ MP ++ 
Sbjct: 245 AQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNE 304

Query: 309 IPWSFMIARYAQTDLSIDAVELFCRMRQ---AFVAPNQFTFVSVLQACATMEGLDLGNQI 365
           + WS +I  +        A  LF  M      F++P   +  S L+ACA+++ L +G Q+
Sbjct: 305 VTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASLDHLRMGEQL 362

Query: 366 HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEV 425
           H+L+ + G+ +D+   N+L+ +YAK G ++ ++ LF E   ++ V+++ ++ GYVQ G  
Sbjct: 363 HALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRA 422

Query: 426 GKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANAL 485
            +A ++F KM    V     T  S++ AC+ LAAL+ G   H   +      +  + NAL
Sbjct: 423 EEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNAL 482

Query: 486 IDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNN 545
           IDMYAKCG I  +R VF+MM   + VSWN MI+GY +HGL  E   +F  M   G+ P+ 
Sbjct: 483 IDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDG 542

Query: 546 LTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
           +TF+ +LSACS+ GL+ +G+ +F  M   YG+ P +EHY  MV LL R G LD+A + I+
Sbjct: 543 VTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQ 602

Query: 606 GIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEK 665
            +P +  V +W ALLGAC ++ N+++G+  ++ I +  PE     VLLSNIY+ A  +++
Sbjct: 603 SMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDE 662

Query: 666 AA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGY 714
           AA            K PG SWIE  G +H F  GD SH     I   L+ + +  +K GY
Sbjct: 663 AAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGY 722

Query: 715 IPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKI 774
            PD S VL+D+ E+EKE+ L  HSEKLA+A+ +  +     I + KNLR+C DCHT IK 
Sbjct: 723 QPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKH 782

Query: 775 ISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           IS + +R II+RD +RFHHF++G CSCGDFW
Sbjct: 783 ISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 813



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/432 (31%), Positives = 215/432 (49%), Gaps = 33/432 (7%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N++++  +L++C    D      IH   +  G   DLF +  LL++YVK   LPDA  +F
Sbjct: 124 NNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIF 183

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFT--AFLKVL----- 167
             MP R+ +++   + GY     +  AV    ++  + H L P A T  A L +L     
Sbjct: 184 ATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGA 243

Query: 168 VSMGWAELCPCVFACVY-----KLGHDSNAFVGTALIDAFSVCGCVEFARKVFD------ 216
           ++ G +    C+ AC++     K        +GTAL+D ++ CG + +AR+VFD      
Sbjct: 244 LAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARN 303

Query: 217 --------GLFNDC--FEEALNFFSQMRAVG---FKPNNFTFAFVLKACLGLDTIRVAKS 263
                   G F  C    +A   F  M A G     P   + A  L+AC  LD +R+ + 
Sbjct: 304 EVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASLDHLRMGEQ 361

Query: 264 AHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDL 323
            H    K+    DL    +LL +Y K+G I  A  +F+EM  KD + +S +++ Y Q   
Sbjct: 362 LHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGR 421

Query: 324 SIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNA 383
           + +A  +F +M+   V P+  T VS++ AC+ +  L  G   H  V+  GL S+  + NA
Sbjct: 422 AEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNA 481

Query: 384 LMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPAT 443
           L+D+YAKCGR++ S ++F   P R+ V+WNTMI GY   G   +A  +F +M     P  
Sbjct: 482 LIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPD 541

Query: 444 EVTYSSVLRACA 455
            VT+  +L AC+
Sbjct: 542 GVTFICLLSACS 553



 Score = 46.6 bits (109), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 52/112 (46%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E ++ +  + + +C     LQ     H  V+ +G   +    N L+++Y K  R+  + +
Sbjct: 438 EPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQ 497

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFL 164
           +F+ MP R+ +S+ T I GY +     EA  LF  ++  G   +   F   L
Sbjct: 498 VFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLL 549


>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
          Length = 813

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 258/751 (34%), Positives = 397/751 (52%), Gaps = 50/751 (6%)

Query: 101 YVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNP--F 158
           ++    L  A  LFD++P  +  ++   I+ Y+ SS    A GL        H + P  +
Sbjct: 67  HIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNY 126

Query: 159 AFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF--- 215
            F   LK   ++        +       G  ++ FV TAL+D +  C C+  A  +F   
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 186

Query: 216 -----------------DGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTI 258
                             G+++      L+   QM+    +PN  T   +L        +
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSM--QMQMHRLRPNASTLVALLPLLAQQGAL 244

Query: 259 RVAKSAHGCALKTCYEMD----------LYVAVALLDLYTKSGEISNARRIFEEMPKKDV 308
               S H   ++ C   +          + +  ALLD+Y K G +  ARR+F+ MP ++ 
Sbjct: 245 AQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNE 304

Query: 309 IPWSFMIARYAQTDLSIDAVELFCRMRQ---AFVAPNQFTFVSVLQACATMEGLDLGNQI 365
           + WS +I  +        A  LF  M      F++P   +  S L+ACA+++ L +G Q+
Sbjct: 305 VTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASLDHLRMGEQL 362

Query: 366 HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEV 425
           H+L+ + G+ +D+   N+L+ +YAK G ++ ++ LF E   ++ V+++ ++ GYVQ G  
Sbjct: 363 HALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRA 422

Query: 426 GKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANAL 485
            +A ++F KM    V     T  S++ AC+ LAAL+ G   H   +      +  + NAL
Sbjct: 423 EEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNAL 482

Query: 486 IDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNN 545
           IDMYAKCG I  +R VF+MM   + VSWN MI+GY +HGL  E   +F  M   G+ P+ 
Sbjct: 483 IDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDG 542

Query: 546 LTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
           +TF+ +LSACS+ GL+ +G+ +F  M   YG+ P +EHY  MV LL R G LD+A + I+
Sbjct: 543 VTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQ 602

Query: 606 GIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEK 665
            +P +  V +W ALLGAC ++ N+++G+  ++ I +  PE     VLLSNIY+ A  +++
Sbjct: 603 SMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDE 662

Query: 666 AA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGY 714
           AA            K PG SWIE  G +H F  GD SH     I   L+ + +  +K GY
Sbjct: 663 AAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGY 722

Query: 715 IPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKI 774
            PD S VL+D+ E+EKE+ L  HSEKLA+A+ +  +     I + KNLR+C DCHT IK 
Sbjct: 723 QPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKH 782

Query: 775 ISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           IS + +R II+RD +RFHHF++G CSCGDFW
Sbjct: 783 ISLLKRRAIIVRDANRFHHFKNGQCSCGDFW 813



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 136/432 (31%), Positives = 210/432 (48%), Gaps = 33/432 (7%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N++++  +L++C    D      IH   +  G   DLF +  LL++YVK   LPDA  +F
Sbjct: 124 NNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIF 183

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFT--AFLKVLVSMGW 172
             MP R+ +++   + GY     +  AV    ++  + H L P A T  A L +L   G 
Sbjct: 184 ATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGA 243

Query: 173 AELCPCVFACVYKLGHDSN----------AFVGTALIDAFSVCGCVEFARKVFD------ 216
                 V A   +    SN            +GTAL+D ++ CG + +AR+VFD      
Sbjct: 244 LAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARN 303

Query: 217 --------GLFNDC--FEEALNFFSQMRAVG---FKPNNFTFAFVLKACLGLDTIRVAKS 263
                   G F  C    +A   F  M A G     P   + A  L+AC  LD +R+ + 
Sbjct: 304 EVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASLDHLRMGEQ 361

Query: 264 AHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDL 323
            H    K+    DL    +LL +Y K+G I  A  +F+EM  KD + +S +++ Y Q   
Sbjct: 362 LHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGR 421

Query: 324 SIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNA 383
           + +A  +F +M+   V P+  T VS++ AC+ +  L  G   H  V+  GL S+  + NA
Sbjct: 422 AEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNA 481

Query: 384 LMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPAT 443
           L+D+YAKCGR++ S ++F   P R+ V+WNTMI GY   G   +A  +F +M     P  
Sbjct: 482 LIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPD 541

Query: 444 EVTYSSVLRACA 455
            VT+  +L AC+
Sbjct: 542 GVTFICLLSACS 553



 Score = 46.6 bits (109), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 53/119 (44%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E ++ +  + + +C     LQ     H  V+ +G   +    N L+++Y K  R+  + +
Sbjct: 438 EPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQ 497

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
           +F+ MP R+ +S+ T I GY +     EA  LF  ++  G   +   F   L      G
Sbjct: 498 VFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSG 556


>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Glycine max]
          Length = 638

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 244/641 (38%), Positives = 365/641 (56%), Gaps = 71/641 (11%)

Query: 233 MRAVGFKPNNFTFAFVL-----KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLY 287
           M A+ F+PN  ++   L     KAC    ++R  K  H   +KT    D  +A  +L L 
Sbjct: 1   MNALMFQPNTASYYPRLDVPQIKAC---KSMRELKQVHAFLVKTGQTHDNAIATEILRLS 57

Query: 288 TKSG--EISNARRIFEEMPKKDVIPWSFMIARYAQT-DLSIDAVELFCRM-RQAFVAPNQ 343
             S   +I  A  +F+++P+++   W+ +I   A+T D  +DA+ +FC+M  +A V PNQ
Sbjct: 58  ATSDFRDIGYALSVFDQLPERNCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQ 117

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS------ 397
           FTF SVL+ACA M  L  G Q+H L+++ GL+ D FV   L+ +Y  CG ME++      
Sbjct: 118 FTFPSVLKACAVMARLAEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYR 177

Query: 398 -----------------------------------------VELFAESPKRNHVTWNTMI 416
                                                     ELF    +R+ V+WN MI
Sbjct: 178 NVEGVDDVRNLVRDERGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMI 237

Query: 417 VGYVQLGEVGKAMIMFSKMLE-EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY 475
            GY Q G   +A+ +F +M++   V    VT  SVL A + L  LE G  VH    K   
Sbjct: 238 SGYAQNGFYKEAIEIFHRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKI 297

Query: 476 DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDL 535
            +D V+ +AL+DMYAKCGSI  A  VF+ +   N ++WNA+I G +MHG + ++      
Sbjct: 298 RIDDVLGSALVDMYAKCGSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSR 357

Query: 536 MQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAG 595
           M++ G  P+++T++ +LSACS+ GL+++G ++F  MV + G++P IEHY  MV LLGRAG
Sbjct: 358 MEKCGISPSDVTYIAILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAG 417

Query: 596 HLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSN 655
           +L++A +LI  +P +P  +IW+ALLGA  +H N++IG  +A+ ++   P D   +V LSN
Sbjct: 418 YLEEAEELILNMPMKPDDVIWKALLGASKMHKNIKIGMRAAEVLMQMAPHDSGAYVALSN 477

Query: 656 IYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEW 704
           +YA + +W+  A+           K+PG SWIE  G++H F   D SH+    I  MLE 
Sbjct: 478 MYASSGNWDGVAAVRLMMKDMDIRKDPGCSWIEIDGVIHEFLVEDDSHSRAKDIHSMLEE 537

Query: 705 LNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRI 764
           ++ K    G++PD + VL  + E  KE  L  HSEK+A+AF L   PP +P+ I+KNLRI
Sbjct: 538 ISNKLSLEGHMPDTTQVLLKMDEKHKESVLHYHSEKIAVAFGLISTPPKTPLCIVKNLRI 597

Query: 765 CVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           C DCH+++K+ISK+ +R+I+IRD  RFHHF+ G CSC D+W
Sbjct: 598 CEDCHSSMKLISKMYERKIVIRDRKRFHHFEHGSCSCMDYW 638



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 100/423 (23%), Positives = 186/423 (43%), Gaps = 42/423 (9%)

Query: 71  DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKL-NRLPDATKLFDEM-----PERNTIS 124
           D+  A+++  Q L + NC   FA N ++    +  +R  DA  +F +M      E N  +
Sbjct: 64  DIGYALSVFDQ-LPERNC---FAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFT 119

Query: 125 FVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVF---- 180
           F + ++   V ++  E   +   L + G   + F  T  L++ V  G  E    +F    
Sbjct: 120 FPSVLKACAVMARLAEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNV 179

Query: 181 --------ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------------- 219
                       + G + N  +   ++D ++  G ++ AR++FD +              
Sbjct: 180 EGVDDVRNLVRDERGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISG 239

Query: 220 ---NDCFEEALNFFSQMRAVG-FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
              N  ++EA+  F +M  +G   PN  T   VL A   L  + + K  H  A K    +
Sbjct: 240 YAQNGFYKEAIEIFHRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRI 299

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
           D  +  AL+D+Y K G I  A ++FE +P+ +VI W+ +I   A    + D      RM 
Sbjct: 300 DDVLGSALVDMYAKCGSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRME 359

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQ-IHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
           +  ++P+  T++++L AC+    +D G    + +V  VGL   +     ++D+  + G +
Sbjct: 360 KCGISPSDVTYIAILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYL 419

Query: 395 ENSVELFAESP-KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           E + EL    P K + V W  ++ G  ++ +  K  +  +++L +  P     Y ++   
Sbjct: 420 EEAEELILNMPMKPDDVIWKALL-GASKMHKNIKIGMRAAEVLMQMAPHDSGAYVALSNM 478

Query: 454 CAS 456
            AS
Sbjct: 479 YAS 481


>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 695

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 227/598 (37%), Positives = 343/598 (57%), Gaps = 11/598 (1%)

Query: 219 FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
           F    + AL  F +M     + + FTF+ VLKAC  +  +R  +  H   LK+ ++ + +
Sbjct: 98  FKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEF 157

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V   L+ +Y   G+I  AR +F+ MP++ ++ W+ M++ Y +  L  + V+LF ++ +  
Sbjct: 158 VENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELR 217

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           +  +  T +SVL AC  +  L++G  I   +V  GL  +  ++ +L+D+YAKCG+++ + 
Sbjct: 218 IEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTAR 277

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
           +LF E  KR+ V W+ MI GY Q     +A+ +F +M +  V   EVT  SVL +CA L 
Sbjct: 278 KLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLG 337

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           A E G  VH    K    + V +   LID YAKCG I  +  VF  M+  N  +W A+I 
Sbjct: 338 AYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQ 397

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           G + +G     L+ F  M +   +PN++TF+GVLSACS+  L++QG   F SM  ++ IE
Sbjct: 398 GLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIE 457

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P IEHY  MV +LGRAG L++A + I+ +PF P+ ++WR LL +C  H N+E+   S +H
Sbjct: 458 PRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEH 517

Query: 639 ILDFEPEDEATHVLLSNIYAM---------ARSW--EKAASKEPGLSWIENQGMVHYFRA 687
           I   EP     ++LLSN YA+          RS   EK   K PG S IE  G+VH F +
Sbjct: 518 ITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFS 577

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFAL 747
            D  H     I   L+ +  + ++ GY+P+      +  E+ KE  +  HSEKLA+A+ L
Sbjct: 578 EDGEHKHSKEIHDALDKMMKQIKRLGYVPNTDDARLEAEEESKETSVSHHSEKLAIAYGL 637

Query: 748 FKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            +  P + IRI KNLR+C DCH A K IS++ +R II+RD +RFHHF+DG CSC D+W
Sbjct: 638 IRTSPRTTIRISKNLRMCRDCHNATKFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW 695



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 140/497 (28%), Positives = 238/497 (47%), Gaps = 29/497 (5%)

Query: 50  SVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD 109
           S+++F  +  +  LQ C    DLQ    +H  +LK    LD   T  +L     L  LPD
Sbjct: 15  SITQFPENPKSLILQQCKTPKDLQQ---VHAHLLKTRRLLDPIITEAVLESAALL--LPD 69

Query: 110 ----ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLK 165
               A  +F+ + +  + ++   I+G         A+ LF  +H +  + + F F++ LK
Sbjct: 70  TIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLK 129

Query: 166 VLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL------- 218
               M        V A + K G  SN FV   LI  ++ CG +  AR VFDG+       
Sbjct: 130 ACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVA 189

Query: 219 ---------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCAL 269
                     N  ++E +  F ++  +  + ++ T   VL AC  L  + + +      +
Sbjct: 190 WNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIV 249

Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVE 329
                 +  +  +L+D+Y K G++  AR++F+EM K+DV+ WS MI+ YAQ D   +A+ 
Sbjct: 250 SKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALN 309

Query: 330 LFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYA 389
           LF  M++  V PN+ T VSVL +CA +   + G  +H  + +  +   V +   L+D YA
Sbjct: 310 LFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYA 369

Query: 390 KCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSS 449
           KCG ++ SVE+F E   +N  TW  +I G    GE   A+  FS MLE  V   +VT+  
Sbjct: 370 KCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIG 429

Query: 450 VLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDARLVFDMMN- 506
           VL AC+    ++ G  +   +++ ++D++  + +   ++D+  + G + +A    D M  
Sbjct: 430 VLSACSHACLVDQGRHLFN-SMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPF 488

Query: 507 DWNEVSWNAMISGYSMH 523
             N V W  +++    H
Sbjct: 489 PPNAVVWRTLLASCRAH 505



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 119/377 (31%), Positives = 201/377 (53%), Gaps = 7/377 (1%)

Query: 246 AFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD--LYTKSGEISNARRIFEEM 303
           + +L+ C    T +  +  H   LKT   +D  +  A+L+         I  A  IF  +
Sbjct: 25  SLILQQC---KTPKDLQQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHI 81

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
            K +   ++ MI   A      +A+ LF +M +  V  ++FTF SVL+AC+ M+ L  G 
Sbjct: 82  DKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGE 141

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
           Q+H+L+++ G  S+ FV N L+ +YA CG++  +  +F   P+R+ V WN+M+ GY + G
Sbjct: 142 QVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNG 201

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN 483
              + + +F K+LE ++   +VT  SVL AC  LA LE G  +    V      +  +  
Sbjct: 202 LWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTT 261

Query: 484 ALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRP 543
           +LIDMYAKCG +  AR +FD M+  + V+W+AMISGY+      E L +F  MQ+    P
Sbjct: 262 SLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYP 321

Query: 544 NNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKL 603
           N +T V VL +C+  G  E G+ +    +    ++  +   T ++    + G++D++ ++
Sbjct: 322 NEVTMVSVLYSCAMLGAYETGK-WVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEV 380

Query: 604 IEGIPFQPSVMIWRALL 620
            + + F+ +V  W AL+
Sbjct: 381 FKEMSFK-NVFTWTALI 396


>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
          Length = 645

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 242/628 (38%), Positives = 345/628 (54%), Gaps = 65/628 (10%)

Query: 205 CGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFV 248
           C  V  AR++FD +                +N  F+ A++ +  M  +G +PN +T+ FV
Sbjct: 56  CNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFV 115

Query: 249 LKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDV 308
           LKAC GL  I      H  A     E D++V  AL+D Y K G +  A+R+F  M  +DV
Sbjct: 116 LKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDV 175

Query: 309 IPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSL 368
           + W+ MIA  +   L  DAV+L  +M++  + PN  T V VL  C  +            
Sbjct: 176 VAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQCL------------ 223

Query: 369 VVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKA 428
                             +YA+        ++F     RN V+W+ MI GYV    + +A
Sbjct: 224 ------------------LYAR--------KIFDVMGVRNEVSWSAMIGGYVASDCMKEA 257

Query: 429 MIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDM 488
           + +F  M    +     T   VL AC+ LAAL+ G   H   +   +  D ++ NALIDM
Sbjct: 258 LDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDM 317

Query: 489 YAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTF 548
           Y+KCG I+ AR VF+ M+  + VSWNAMI GY +HGL  E L +F  +   G +P+++TF
Sbjct: 318 YSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITF 377

Query: 549 VGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIP 608
           + +LS+CS+ GL+ +G  +F +M  ++ I P +EH   MV +LGRAG +D+A   I  +P
Sbjct: 378 ICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMP 437

Query: 609 FQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA- 667
           F+P V IW ALL AC IH N+E+G   ++ I    PE     VLLSNIY+ A  W+ AA 
Sbjct: 438 FEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAH 497

Query: 668 ----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPD 717
                      K PG SWIE  G+VH F  GD SH  ++ I   LE L ++ ++ GY  +
Sbjct: 498 IRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAE 557

Query: 718 LSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISK 777
            S V +DV E+EKE+ L  HSEKLA+AF +  +    PI + KNLR+C DCHTAIK ++ 
Sbjct: 558 CSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHTAIKFMTL 617

Query: 778 IVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           I +REI +RD +RFHHF++G C+CGDFW
Sbjct: 618 ITKREITVRDANRFHHFKNGTCNCGDFW 645



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 127/437 (29%), Positives = 196/437 (44%), Gaps = 53/437 (12%)

Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
            +  +L+AC+   ++  AK  H   LK     D  V   L  LY    ++  ARR+F+E+
Sbjct: 10  NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
           P   VI W+ +I  YA       A++L+  M    V PN++T+  VL+AC+ +  ++ G 
Sbjct: 70  PNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGV 129

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
           +IHS     GL SDVFV  AL+D YAKCG +  +  LF+    R+ V WN MI G    G
Sbjct: 130 EIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYG 189

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN 483
               A+ +  +M EE +     T   VL  C  L                          
Sbjct: 190 LCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQCL-------------------------- 223

Query: 484 ALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRP 543
               +Y        AR +FD+M   NEVSW+AMI GY       E L +F +MQ  G  P
Sbjct: 224 ----LY--------ARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDP 271

Query: 544 NNLTFVGVLSACSNGGLLEQG---EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKA 600
           +  T +GVL ACS+   L+ G     Y   +V  +  +  I    +++ +  + G +  A
Sbjct: 272 DLTTMLGVLPACSHLAALQHGFCSHGYL--IVRGFATDTLI--CNALIDMYSKCGKISFA 327

Query: 601 AKLIEGIPFQPSVMIWRALLGACIIHN-NVE-IGRLSAQHILDFEPEDEATHVLLSN--- 655
            ++   +  +  ++ W A++    IH   +E +G       L  +P+D     LLS+   
Sbjct: 328 REVFNRMD-RHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSH 386

Query: 656 --IYAMARSWEKAASKE 670
             +    R W  A S++
Sbjct: 387 SGLVMEGRLWFDAMSRD 403



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 122/497 (24%), Positives = 226/497 (45%), Gaps = 62/497 (12%)

Query: 46  PITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLN 105
           P+ F V     ++Y   L++CIQ+  L  A  IH   LK  +  D    + L  +Y+  N
Sbjct: 2   PLRFEVK----NNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCN 57

Query: 106 RLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLK 165
           ++  A +LFDE+P  + I +   I+ Y  +  F  A+ L+ ++   G   N + +   LK
Sbjct: 58  QVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLK 117

Query: 166 VLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--------- 216
               +   E    + +     G +S+ FV TAL+D ++ CG +  A+++F          
Sbjct: 118 ACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVA 177

Query: 217 --------GLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCA 268
                    L+  C ++A+    QM+  G  PN+ T   VL  C  L             
Sbjct: 178 WNAMIAGCSLYGLC-DDAVQLIMQMQEEGICPNSSTIVGVLPTCQCL------------- 223

Query: 269 LKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAV 328
                   LY                 AR+IF+ M  ++ + WS MI  Y  +D   +A+
Sbjct: 224 --------LY-----------------ARKIFDVMGVRNEVSWSAMIGGYVASDCMKEAL 258

Query: 329 ELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVY 388
           ++F  M+ + + P+  T + VL AC+ +  L  G   H  ++  G  +D  + NAL+D+Y
Sbjct: 259 DIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMY 318

Query: 389 AKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYS 448
           +KCG++  + E+F    + + V+WN MI+GY   G   +A+ +F  +L   +   ++T+ 
Sbjct: 319 SKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFI 378

Query: 449 SVLRACA-SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMN 506
            +L +C+ S   +E  +    ++   +    +     ++D+  + G I +A   + +M  
Sbjct: 379 CLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPF 438

Query: 507 DWNEVSWNAMISGYSMH 523
           + +   W+A++S   +H
Sbjct: 439 EPDVRIWSALLSACRIH 455


>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Glycine max]
          Length = 618

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 221/571 (38%), Positives = 348/571 (60%), Gaps = 12/571 (2%)

Query: 247 FVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK 306
           ++L+ C    +    ++ H   ++   EMD+  +  L+++Y+K   + +AR+ F EMP K
Sbjct: 48  YLLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVK 107

Query: 307 DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIH 366
            ++ W+ +I    Q     +A++L  +M++     N+FT  SVL  CA    +    Q+H
Sbjct: 108 SLVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLH 167

Query: 367 SLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVG 426
           +  ++  + S+ FV  AL+ VYAKC  ++++ ++F   P++N VTW++M+ GYVQ G   
Sbjct: 168 AFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHE 227

Query: 427 KAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALI 486
           +A+++F               SS + ACA LA L  G QVH ++ K+ +  ++ V+++LI
Sbjct: 228 EALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLI 287

Query: 487 DMYAKCGSITDARLVFD-MMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNN 545
           DMYAKCG I +A LVF  ++   + V WNAMISG++ H  + E + +F+ MQQRG+ P++
Sbjct: 288 DMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDD 347

Query: 546 LTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
           +T+V VL+ACS+ GL E+G+ YF  MV  + + P + HY+ M+ +LGRAG + KA  LIE
Sbjct: 348 VTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIE 407

Query: 606 GIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEK 665
            +PF  +  +W +LL +C I+ N+E   ++A+++ + EP +   H+LL+NIYA  + W++
Sbjct: 408 RMPFNATSSMWGSLLASCKIYGNIEFAEIAAKYLFEMEPNNAGNHILLANIYAANKKWDE 467

Query: 666 AA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGY 714
            A            KE G SWIE +  +H F  G+ +H  ++ I   L+ L ++ +K  Y
Sbjct: 468 VARARKLLRETDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDIYAKLDNLVVELKKLNY 527

Query: 715 IPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKI 774
             D S  L DV E+ K+  L  HSEKLA+ F L  +P   PIRIIKNLRIC DCHT +K+
Sbjct: 528 KVDTSNDLHDVEENRKQMLLRHHSEKLAITFGLMCLPRDIPIRIIKNLRICGDCHTFMKL 587

Query: 775 ISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +SK   REII+RD +RFHHF+DG CSCG+FW
Sbjct: 588 VSKSTSREIIVRDTNRFHHFKDGFCSCGEFW 618



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 189/399 (47%), Gaps = 46/399 (11%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           LQ C +          H Q+++ G  +D+  +N+L+N+Y K + +  A K F+EMP ++ 
Sbjct: 50  LQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKSL 109

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +S+ T I   T +++  EA+ L   + REG   N F  ++            LC C F C
Sbjct: 110 VSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSV-----------LCNCAFKC 158

Query: 183 V-----------YKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL------------- 218
                        K   DSN FVGTAL+  ++ C  ++ A ++F+ +             
Sbjct: 159 AILECMQLHAFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMA 218

Query: 219 ---FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
               N   EEAL  F   + +GF  + F  +  + AC GL T+   K  H  + K+ +  
Sbjct: 219 GYVQNGFHEEALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGS 278

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEE-MPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
           ++YV+ +L+D+Y K G I  A  +F+  +  + ++ W+ MI+ +A+   + +A+ LF +M
Sbjct: 279 NIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKM 338

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLS-DVFVSNALMDVYAKCGR 393
           +Q    P+  T+V VL AC+ M   + G +   L+VR   LS  V   + ++D+  + G 
Sbjct: 339 QQRGFFPDDVTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGL 398

Query: 394 MENSVELFAESP-KRNHVTWNTM-----IVGYVQLGEVG 426
           +  + +L    P       W ++     I G ++  E+ 
Sbjct: 399 VHKAYDLIERMPFNATSSMWGSLLASCKIYGNIEFAEIA 437



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 177/364 (48%), Gaps = 21/364 (5%)

Query: 181 ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--------------GLFNDCFE-- 224
           A + ++G + +      LI+ +S C  V+ ARK F+              G      E  
Sbjct: 67  AQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKSLVSWNTVIGALTQNAEDR 126

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           EAL    QM+  G   N FT + VL  C     I      H  ++K   + + +V  ALL
Sbjct: 127 EALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFVGTALL 186

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
            +Y K   I +A ++FE MP+K+ + WS M+A Y Q     +A+ +F   +      + F
Sbjct: 187 HVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQLMGFDQDPF 246

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
              S + ACA +  L  G Q+H++  + G  S+++VS++L+D+YAKCG +  +  +F   
Sbjct: 247 MISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGV 306

Query: 405 PK-RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
            + R+ V WN MI G+ +     +AMI+F KM +      +VTY  VL AC+ +   E G
Sbjct: 307 LEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLHEEG 366

Query: 464 MQVHCLTVKA-NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS--WNAMISGY 520
            +   L V+  N    V+  + +ID+  + G +  A  + + M  +N  S  W ++++  
Sbjct: 367 QKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERM-PFNATSSMWGSLLASC 425

Query: 521 SMHG 524
            ++G
Sbjct: 426 KIYG 429



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 126/274 (45%), Gaps = 24/274 (8%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           + FN  + ++ L +C     +   M +H   +K     + F    LL+VY K + + DA+
Sbjct: 140 TPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFVGTALLHVYAKCSSIKDAS 199

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
           ++F+ MPE+N +++ + + GY  +    EA+ +F      G + +PF  ++ +     + 
Sbjct: 200 QMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQLMGFDQDPFMISSAVSACAGLA 259

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG--------LFNDCF 223
                  V A  +K G  SN +V ++LID ++ CGC+  A  VF G        L+N   
Sbjct: 260 TLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMI 319

Query: 224 E---------EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
                     EA+  F +M+  GF P++ T+  VL AC  +      +      ++   +
Sbjct: 320 SGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLHEEGQKYFDLMVR---Q 376

Query: 275 MDLYVAV----ALLDLYTKSGEISNARRIFEEMP 304
            +L  +V     ++D+  ++G +  A  + E MP
Sbjct: 377 HNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMP 410


>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
          Length = 1702

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 265/777 (34%), Positives = 417/777 (53%), Gaps = 40/777 (5%)

Query: 58   SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
            +Y   +++C    D+   + +H  V+K G   D+F  N L++ Y     + DA +LFD M
Sbjct: 544  TYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIM 603

Query: 118  PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE--- 174
            PERN +S+ + I+ ++ +    E+  L   +  E  +       A L  ++ +   E   
Sbjct: 604  PERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREI 663

Query: 175  -LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--------------GLF 219
             L   V     KL  D    +  AL+D +S CGC+  A+ +F               G F
Sbjct: 664  GLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGF 723

Query: 220  NDCFEEALNF--FSQMRAVG--FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
            +   +    F    QM A G   K +  T    +  C     +   K  H  +LK  +  
Sbjct: 724  SAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVY 783

Query: 276  DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTD---LSIDAVELFC 332
            +  VA A +  Y K G +S A+R+F  +  K V  W+ +I  +AQ++   LS+DA     
Sbjct: 784  NELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDA---HL 840

Query: 333  RMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCG 392
            +M+ + + P+ FT  S+L AC+ ++ L LG ++H  ++R  L  D+FV  +++ +Y  CG
Sbjct: 841  QMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCG 900

Query: 393  RMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLR 452
             +     LF     ++ V+WNT+I GY+Q G   +A+ +F +M+   +    ++   V  
Sbjct: 901  ELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFG 960

Query: 453  ACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS 512
            AC+ L +L  G + H   +K   + D  +A +LIDMYAK GSIT +  VF+ + + +  S
Sbjct: 961  ACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS 1020

Query: 513  WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
            WNAMI GY +HGL+ E +K+F+ MQ+ G  P++LTF+GVL+AC++ GL+ +G  Y   M 
Sbjct: 1021 WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMK 1080

Query: 573  ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLI-EGIPFQPSVMIWRALLGACIIHNNVEI 631
            +++G++P ++HY  ++ +LGRAG LDKA +++ E +  +  V IW++LL +C IH N+E+
Sbjct: 1081 SSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEM 1140

Query: 632  GRLSAQHILDFEPEDEATHVLLSNIYAMARSWEK-----------AASKEPGLSWIENQG 680
            G   A  + + EPE    +VLLSN+YA    WE            +  K+ G SWIE   
Sbjct: 1141 GEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNR 1200

Query: 681  MVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEK 740
             V  F  G+        I+ +   L MK  K GY PD  +V  D+ E+EK   L  HSEK
Sbjct: 1201 KVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEK 1260

Query: 741  LALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDG 797
            LAL + L K    + IR+ KNLRICVDCH A K+ISK+++REI++RD  RFHHF++G
Sbjct: 1261 LALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNG 1317



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 229/449 (51%), Gaps = 27/449 (6%)

Query: 196 TALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQM-RAVGF 238
           T +I  +++CG  + +R VFD L                 N+ ++E L  F +M      
Sbjct: 479 TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDL 538

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
            P++FT+  V+KAC G+  + +  + HG  +KT    D++V  AL+  Y   G +++A +
Sbjct: 539 LPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQ 598

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ-----AFVAPNQFTFVSVLQAC 353
           +F+ MP+++++ W+ MI  ++    S ++  L   M +     AF+ P+  T V+VL  C
Sbjct: 599 LFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFM-PDVATLVTVLPVC 657

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
           A    + LG  +H   V++ L  ++ ++NALMD+Y+KCG + N+  +F  +  +N V+WN
Sbjct: 658 AREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWN 717

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLE--EQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
           TM+ G+   G+      +  +ML   E V A EVT  + +  C   + L    ++HC ++
Sbjct: 718 TMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSL 777

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
           K  +  + +VANA +  YAKCGS++ A+ VF  +      SWNA+I G++        L 
Sbjct: 778 KQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLD 837

Query: 532 VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLL 591
               M+  G  P++ T   +LSACS    L  G+     ++ N+ +E  +  Y S++SL 
Sbjct: 838 AHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW-LERDLFVYLSVLSLY 896

Query: 592 GRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
              G L     L + +    S++ W  ++
Sbjct: 897 IHCGELCTVQALFDAME-DKSLVSWNTVI 924



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 190/368 (51%), Gaps = 37/368 (10%)

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM- 334
           D  +   ++ +Y   G   ++R +F+ +  K++  W+ +I+ Y++ +L  + +E F  M 
Sbjct: 474 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 533

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
               + P+ FT+  V++ACA M  + +G  +H LVV+ GL+ DVFV NAL+  Y   G +
Sbjct: 534 STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFV 593

Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ-----VPATEVTYSS 449
            ++++LF   P+RN V+WN+MI  +   G   ++ ++  +M+EE      +P    T  +
Sbjct: 594 TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDV-ATLVT 652

Query: 450 VLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWN 509
           VL  CA    +  G  VH   VK   D ++V+ NAL+DMY+KCG IT+A+++F M N+ N
Sbjct: 653 VLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKN 712

Query: 510 EVSWNAMISGYSMHGLSAEVLKVFDLMQQ-----RGWRPNNLTFVGVLSACSNGGLLE-- 562
            VSWN M+ G+S  G   +    FD+++Q        + + +T +  +  C +   L   
Sbjct: 713 VVSWNTMVGGFSAEG---DTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSL 769

Query: 563 --------QGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVM 614
                   + E  +  +VAN           + V+   + G L  A ++  GI  + +V 
Sbjct: 770 KELHCYSLKQEFVYNELVAN-----------AFVASYAKCGSLSYAQRVFHGIRSK-TVN 817

Query: 615 IWRALLGA 622
            W AL+G 
Sbjct: 818 SWNALIGG 825



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 143/598 (23%), Positives = 261/598 (43%), Gaps = 44/598 (7%)

Query: 63   LQSCIQNDDLQTAMTIHCQVLKKGNCL---DLFATNVLLNVYVKLNRLPDATKLFDEMPE 119
            LQ+  +  D++    IH Q++     L   D+  T ++  +Y       D+  +FD +  
Sbjct: 446  LQASGKRKDIEMGRKIH-QLVSGSTRLRNDDVLCTRII-TMYAMCGSPDDSRFVFDALRS 503

Query: 120  RNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHEL-NPFAFTAFLKVLVSMGWAELCPC 178
            +N   +   I  Y+ +  + E +  F  +      L + F +   +K    M    +   
Sbjct: 504  KNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLA 563

Query: 179  VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--------------GLFND--C 222
            V   V K G   + FVG AL+  +   G V  A ++FD               +F+D   
Sbjct: 564  VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 623

Query: 223  FEEALNFFSQMRAV----GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
             EE+     +M        F P+  T   VL  C     I + K  HG A+K   + +L 
Sbjct: 624  SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV 683

Query: 279  VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
            +  AL+D+Y+K G I+NA+ IF+    K+V+ W+ M+  ++      D    F  +RQ  
Sbjct: 684  LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEG---DTHGTFDVLRQML 740

Query: 339  -----VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
                 V  ++ T ++ +  C     L    ++H   ++   + +  V+NA +  YAKCG 
Sbjct: 741  AGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGS 800

Query: 394  MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
            +  +  +F     +   +WN +I G+ Q  +   ++    +M    +     T  S+L A
Sbjct: 801  LSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSA 860

Query: 454  CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
            C+ L +L  G +VH   ++   + D+ V  +++ +Y  CG +   + +FD M D + VSW
Sbjct: 861  CSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSW 920

Query: 514  NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS---NGGLLEQGEAY-FK 569
            N +I+GY  +G     L VF  M   G +   ++ + V  ACS   +  L  +  AY  K
Sbjct: 921  NTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALK 980

Query: 570  SMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
             ++ +     C     S++ +  + G + +++K+  G+  + S   W A++    IH 
Sbjct: 981  HLLEDDAFIAC-----SLIDMYAKNGSITQSSKVFNGLK-EKSTASWNAMIMGYGIHG 1032



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 113/214 (52%), Gaps = 6/214 (2%)

Query: 349 VLQACATMEGLDLGNQIHSLVV-RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKR 407
           +LQA    + +++G +IH LV     L +D  +   ++ +YA CG  ++S  +F     +
Sbjct: 445 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 504

Query: 408 NHVTWNTMIVGYVQLGEVGKAMIMFSKMLE-EQVPATEVTYSSVLRACASLAALEPGMQV 466
           N   WN +I  Y +     + +  F +M+    +     TY  V++ACA ++ +  G+ V
Sbjct: 505 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 564

Query: 467 HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLS 526
           H L VK     DV V NAL+  Y   G +TDA  +FD+M + N VSWN+MI  +S +G S
Sbjct: 565 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 624

Query: 527 AE-VLKVFDLMQQRG---WRPNNLTFVGVLSACS 556
            E  L + ++M++ G   + P+  T V VL  C+
Sbjct: 625 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA 658



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 76/327 (23%), Positives = 143/327 (43%), Gaps = 43/327 (13%)

Query: 21   INAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHC 80
            +N+W   +   A  +  + S      +  S    +S +  + L +C +   L+    +H 
Sbjct: 816  VNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHG 875

Query: 81   QVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVE 140
             +++     DLF    +L++Y+    L     LFD M +++ +S+ T I GY  +     
Sbjct: 876  FIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDR 935

Query: 141  AVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVF----ACVYKLGH--DSNAFV 194
            A+G+F  +   G +L        + ++   G   L P +     A  Y L H  + +AF+
Sbjct: 936  ALGVFRQMVLYGIQL------CGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFI 989

Query: 195  GTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGF 238
              +LID ++  G +  + KVF+GL                 +   +EA+  F +M+  G 
Sbjct: 990  ACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGH 1049

Query: 239  KPNNFTFAFVLKAC-------LGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
             P++ TF  VL AC        GL  +   KS+ G       + +L     ++D+  ++G
Sbjct: 1050 NPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFG------LKPNLKHYACVIDMLGRAG 1103

Query: 292  EISNARRIF-EEMPKK-DVIPWSFMIA 316
            ++  A R+  EEM ++ DV  W  +++
Sbjct: 1104 QLDKALRVVAEEMSEEADVGIWKSLLS 1130


>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Vitis vinifera]
          Length = 703

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 232/638 (36%), Positives = 362/638 (56%), Gaps = 28/638 (4%)

Query: 196 TALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGF- 238
            +LI+ ++ C  +  AR +FDG+                 N    E L  F  M +V + 
Sbjct: 66  NSLINLYAKCDQIMVARILFDGMRKRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYM 125

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
           +PN + FA ++ +C     +      HG ALK+      YV  AL+ +Y++  ++  A  
Sbjct: 126 RPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMS 185

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           ++ E+P  DV  ++ +I    +     +A+E+  RM    +  +  T+V+    C+ ++ 
Sbjct: 186 VWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKD 245

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           L LG Q+H  + R G   D FVS+A++D+Y KCG + N+ ++F     +N V+W  ++  
Sbjct: 246 LRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAA 305

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           Y Q G   +A+  F +M  + +   E T++ +L +CA ++AL  G  +H    K+ ++  
Sbjct: 306 YSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDH 365

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
           ++V NALI+MY+K GSI  A  VF  M   + ++W+AMI G S HGL  E L VF  M  
Sbjct: 366 IIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLA 425

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLD 598
               P+ +TFVGVLSAC++ G +++G  Y   ++   GIEP +EHYT +V LL +AG LD
Sbjct: 426 AKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLD 485

Query: 599 KAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYA 658
           +A   ++  P +  V+ WR LL AC +H N  +G+  A+ +L  +P D  T++LLSN+YA
Sbjct: 486 EAENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQMDPGDVGTYILLSNMYA 545

Query: 659 MARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNM 707
            A+ W           E+   KEPG SWIE +  +H F +   +H + N I   ++ L  
Sbjct: 546 KAKRWDGVVKIRKLMRERNVKKEPGASWIEIRNSIHVFVSEGKTHPESNQIYEKVQELLT 605

Query: 708 KSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVD 767
             R  GY+PD++AV  DV +++K  Y+  HSEKLA+A+ L K P  +PIR+IKNLR+CVD
Sbjct: 606 MIRPMGYVPDIAAVFHDVEDEQKREYVSYHSEKLAIAYGLMKTPSGAPIRVIKNLRMCVD 665

Query: 768 CHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           CH+A+K+ISK+  R II+RD +RFH F DG CSC D+W
Sbjct: 666 CHSAVKLISKVTNRMIIVRDANRFHCFGDGGCSCADYW 703



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 219/468 (46%), Gaps = 19/468 (4%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           ++   N L+N+Y K +++  A  LFD M +RN +S+   + GY  +   +E + LF T+ 
Sbjct: 61  NIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGALMAGYFHNGLVLEVLRLFKTMI 120

Query: 150 REGH-ELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCV 208
              +   N + F   +      G             K G   + +V  ALI  +S    V
Sbjct: 121 SVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDV 180

Query: 209 EFARKVF---------------DGLFNDCF-EEALNFFSQMRAVGFKPNNFTFAFVLKAC 252
           + A  V+               +GL  + +  EAL    +M       +N T+      C
Sbjct: 181 KGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLC 240

Query: 253 LGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWS 312
             L  +R+    H    +T  E D +V+ A++D+Y K G I NAR++F  +  K+V+ W+
Sbjct: 241 SHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWT 300

Query: 313 FMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV 372
            ++A Y+Q     +A+  F  M    + PN++TF  +L +CA +  L  G  +H+ + + 
Sbjct: 301 AILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKS 360

Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMF 432
           G    + V NAL+++Y+K G +E + ++F E   R+ +TW+ MI G    G   +A+++F
Sbjct: 361 GFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVF 420

Query: 433 SKMLEEQVPATEVTYSSVLRACASLAALEPGM-QVHCLTVKANYDMDVVVANALIDMYAK 491
            +ML  +     VT+  VL ACA L +++ G   ++ L  +   +  V     ++ +  K
Sbjct: 421 QEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCK 480

Query: 492 CGSITDAR-LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
            G + +A   +      W+ V+W  ++S   +H       KV +L+ Q
Sbjct: 481 AGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQ 528



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 181/390 (46%), Gaps = 18/390 (4%)

Query: 45  TPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKL 104
           T I+      N + +AT + SC  +  +      H   LK G     +  N L+ +Y + 
Sbjct: 118 TMISVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRR 177

Query: 105 NRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFL 164
           + +  A  ++ E+P  +  S+   I G   +    EA+ +   +  E    +   +    
Sbjct: 178 SDVKGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAF 237

Query: 165 KVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL------ 218
            +   +    L   V   +++ G + ++FV +A+ID +  CG +  ARKVF+ L      
Sbjct: 238 GLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVV 297

Query: 219 ----------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCA 268
                      N CFEEALNFF +M   G  PN +TFA +L +C G+  +   K  H   
Sbjct: 298 SWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRI 357

Query: 269 LKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAV 328
            K+ +E  + V  AL+++Y+KSG I  A ++F EM  +D I WS MI   +   L  +A+
Sbjct: 358 KKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREAL 417

Query: 329 ELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDV 387
            +F  M  A   P+  TFV VL ACA +  +  G   ++ L+ + G+   V     ++ +
Sbjct: 418 VVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGL 477

Query: 388 YAKCGRMENSVELFAESP-KRNHVTWNTMI 416
             K GR++ +      +P K + V W T++
Sbjct: 478 LCKAGRLDEAENFMKSTPVKWDVVAWRTLL 507



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/369 (22%), Positives = 149/369 (40%), Gaps = 54/369 (14%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +Y T+   C    DL+  + +HC++ + G   D F ++ ++++Y K   + +A K+F+ +
Sbjct: 232 TYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRL 291

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
             +N +S+   +  Y+ +  F EA+  F  +  +G   N + F   L     +       
Sbjct: 292 QTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGK 351

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------ND 221
            +   + K G + +  VG ALI+ +S  G +E A KVF  +                 + 
Sbjct: 352 LLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHG 411

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALK-TCYEMDLYVA 280
              EAL  F +M A    P+  TF  VL AC  L +++         +K T  E  +   
Sbjct: 412 LGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHY 471

Query: 281 VALLDLYTKSGEISNARRIFEEMPKK-DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
             ++ L  K+G +  A    +  P K DV+ W                            
Sbjct: 472 TCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWR--------------------------- 504

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
                   ++L AC   +   LG ++  LV+++    DV     L ++YAK  R +  V+
Sbjct: 505 --------TLLSACHVHQNYGLGKKVAELVLQMD-PGDVGTYILLSNMYAKAKRWDGVVK 555

Query: 400 LFAESPKRN 408
           +     +RN
Sbjct: 556 IRKLMRERN 564



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 147/317 (46%), Gaps = 13/317 (4%)

Query: 347 VSVLQACATMEGLDLGNQIHS--LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           + +L+  A  + L  G  IH+  ++       ++   N+L+++YAKC ++  +  LF   
Sbjct: 29  IQLLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGM 88

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE-EQVPATEVTYSSVLRACASLAALEPG 463
            KRN V+W  ++ GY   G V + + +F  M+  + +   E  +++++ +C+    +  G
Sbjct: 89  RKRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEG 148

Query: 464 MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMH 523
            Q H   +K+       V NALI MY++   +  A  V+  +   +  S+N +I+G   +
Sbjct: 149 WQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLEN 208

Query: 524 GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEH 583
           G  +E L+V D M       +N+T+V     CS+   L  G      M    G E     
Sbjct: 209 GYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRT-GAEYDSFV 267

Query: 584 YTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFE 643
            ++++ + G+ G++  A K+   +  + +V+ W A+L A   +   E         L+F 
Sbjct: 268 SSAIIDMYGKCGNILNARKVFNRLQTK-NVVSWTAILAAYSQNGCFE-------EALNFF 319

Query: 644 PEDEATHVLLSNIYAMA 660
           PE E    LL N Y  A
Sbjct: 320 PEMEVDG-LLPNEYTFA 335


>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
          Length = 691

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 237/624 (37%), Positives = 352/624 (56%), Gaps = 45/624 (7%)

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           L  + +M + G  PN +TF F+LK+C    T    +  H   +K   E+D Y   +L+ +
Sbjct: 68  LEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISM 127

Query: 287 YTKSG-------------------------------EISNARRIFEEMPKKDVIPWSFMI 315
           Y ++G                               ++ +AR++F+ + ++DV+ W+ MI
Sbjct: 128 YARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMI 187

Query: 316 ARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV-RVGL 374
             Y +     +A+ELF  M +  V P++ T VSVL ACA    ++LG +IH+LV    G 
Sbjct: 188 TGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGF 247

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
            S + + NA + +Y+KCG +E +  LF     ++ V+WNT+I GY  +    +A+++F +
Sbjct: 248 GSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQE 307

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK--ANYDMDVVVANALIDMYAKC 492
           ML       +VT  SVL ACA L A++ G  +H    K          +  +LIDMYAKC
Sbjct: 308 MLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKC 367

Query: 493 GSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL 552
           G I  A  VF+ M   +  SWNAMI G++MHG +     +F  M++ G  P+++T VG+L
Sbjct: 368 GDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLL 427

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
           SACS+ GLL+ G   FKS+  +Y I P +EHY  M+ LLG AG   +A ++I  +P +P 
Sbjct: 428 SACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPD 487

Query: 613 VMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE-------- 664
            +IW +LL AC +H N+E+    AQ +++ EPE+  ++VLLSNIYA A  WE        
Sbjct: 488 GVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIREV 547

Query: 665 ---KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAV 721
              K   K PG S IE   +VH F  GD  H     I  MLE +++   +AG++PD S V
Sbjct: 548 LNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMDVLLEEAGFVPDTSEV 607

Query: 722 LRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQR 781
           L+++ E+ KE  L  HSEKLA+AF L    P + + ++KNLR+C +CH A K+ISKI +R
Sbjct: 608 LQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTVVKNLRVCRNCHEATKLISKIYKR 667

Query: 782 EIIIRDVHRFHHFQDGCCSCGDFW 805
           EI+ RD  RFHHF+DG CSC D+W
Sbjct: 668 EIVARDRTRFHHFRDGVCSCCDYW 691



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 113/430 (26%), Positives = 199/430 (46%), Gaps = 43/430 (10%)

Query: 265 HGCALKTCYEMDLYVAVALLDLYTKSGEISN---ARRIFEEMPKKDVIPWSFMIARYAQT 321
           H   +KT      Y    LL+L   S        A  +FE   + +++ W+ M+   A +
Sbjct: 2   HAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASS 61

Query: 322 DLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVS 381
              +  +E++ RM      PN +TF  +L++CA  +  + G QIH+ V+++G   D +  
Sbjct: 62  SDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAH 121

Query: 382 NALMDVYAKCGRMENSVELFAESPK-------------------------------RNHV 410
            +L+ +YA+ GR+E++ ++F  S +                               R+ V
Sbjct: 122 TSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDVV 181

Query: 411 TWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLT 470
           +WN MI GYV+     +A+ +F +M+   V   E T  SVL ACA   ++E G ++H L 
Sbjct: 182 SWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLV 241

Query: 471 VKAN-YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEV 529
              + +   + + NA I +Y+KCG +  A  +F+ ++  + VSWN +I GY+   L  E 
Sbjct: 242 DDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEA 301

Query: 530 LKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE---AYFKSMVANYGIEPCIEHYTS 586
           L +F  M + G  PN++T + VL AC++ G ++ G     Y    +   G+       TS
Sbjct: 302 LLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLK--GVTNGSALRTS 359

Query: 587 MVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN--NVEIGRLSAQHILDFEP 644
           ++ +  + G ++ A ++   +    S+  W A++    +H   N      S       EP
Sbjct: 360 LIDMYAKCGDIEAAHQVFNSM-MHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEP 418

Query: 645 EDEATHVLLS 654
           +D     LLS
Sbjct: 419 DDITLVGLLS 428



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 121/484 (25%), Positives = 198/484 (40%), Gaps = 87/484 (17%)

Query: 22  NAWLRGLSAQAALSTQQCSNSTTTPITFSVSEF------NSHSYATSLQSCIQNDDLQTA 75
           N  LRGL++ + L          +P+   V         N++++   L+SC ++   +  
Sbjct: 52  NTMLRGLASSSDL---------VSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEG 102

Query: 76  MTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDA------------------------- 110
             IH QV+K G  LD +A   L+++Y +  RL DA                         
Sbjct: 103 RQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASR 162

Query: 111 ------TKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFL 164
                  K+FD + ER+ +S+   I GY  +  + EA+ LF  + R     +     + L
Sbjct: 163 GDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVL 222

Query: 165 KVLVSMGWAELCPCVFACVYK-LGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----- 218
                 G  EL   +   V    G  S+  +  A I  +S CG VE A  +F+GL     
Sbjct: 223 SACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDV 282

Query: 219 -----------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAH-- 265
                        + ++EAL  F +M   G  PN+ T   VL AC  L  I + +  H  
Sbjct: 283 VSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVY 342

Query: 266 ----------GCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMI 315
                     G AL+T          +L+D+Y K G+I  A ++F  M  K +  W+ MI
Sbjct: 343 IDKRLKGVTNGSALRT----------SLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMI 392

Query: 316 ARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR-VGL 374
             +A    +  A +LF RMR+  + P+  T V +L AC+    LDLG  I   V +   +
Sbjct: 393 FGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNI 452

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
              +     ++D+    G  + + E+    P + + V W +++      G +  A     
Sbjct: 453 TPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQ 512

Query: 434 KMLE 437
           K++E
Sbjct: 513 KLME 516


>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 687

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 237/646 (36%), Positives = 363/646 (56%), Gaps = 31/646 (4%)

Query: 191 NAFVGTALID--AFSVCGCVEFARKVFDGLFN-DCF---------------EEALNFFSQ 232
           N    + LI   A S  G + +ARK+F  + N D F                EA++ +  
Sbjct: 42  NPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYF 101

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           M   G   +N+T+ FVL AC  L  +++ +  H   LK  +  DL+V  AL+  Y   G 
Sbjct: 102 MVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGS 161

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA-FVAPNQFTFVSVLQ 351
              A  +F+E   +DV+ W+ MI  +    LS  A +L   M +   + P++ T VS++ 
Sbjct: 162 FGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVP 221

Query: 352 ACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
           ACA +  L+ G  +HS    +GL  ++ V+NA++D+Y KC  +E++ E+F    +++ ++
Sbjct: 222 ACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLS 281

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
           W +M+ G  + G   +A+ +F KM   ++   E+T   VL ACA   AL+ G  +H L  
Sbjct: 282 WTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLID 341

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
           K   + D+V+  AL+DMYAKCGSI  A  VF  M   N  +WNA+I G +MHG   + + 
Sbjct: 342 KFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAIS 401

Query: 532 VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLL 591
           +FD M+     P+++TF+ +L ACS+ GL+++G A F++M   + IEP +EHY  +V LL
Sbjct: 402 LFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLL 461

Query: 592 GRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHV 651
            RA  +D A   IE +P + + ++W  LLGAC    + ++     + +++ EP+    +V
Sbjct: 462 CRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYV 521

Query: 652 LLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRG 700
           +LSN+YA    W+           K   K PG SWIE  GM+H F AGD SH     I  
Sbjct: 522 MLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYA 581

Query: 701 MLEWLNMK-SRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRII 759
           M+E +  + +   G++P  + VL D+ E+EKE  L++HSEKLA+A  L   P  SPIRI+
Sbjct: 582 MIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIV 641

Query: 760 KNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           KNLR+C DCH+ +K+ SK+  REI+ RD  RFHHF++G CSC DFW
Sbjct: 642 KNLRVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 687



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 97/402 (24%), Positives = 175/402 (43%), Gaps = 27/402 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           ++++Y   L +C +   ++     HC+VLK G   DLF  N L+  Y        A  +F
Sbjct: 110 DNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVF 169

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFT--AFLKVLVSMGW 172
           DE   R+ +++   I  +       +A  L   + +  + L P   T  + +     +G 
Sbjct: 170 DESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDN-LRPDEVTMVSLVPACAQLGN 228

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------G 217
            E    + +   +LG D N  V  A++D +  C  +E A++VF+               G
Sbjct: 229 LERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSG 288

Query: 218 LFNDC-FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
           L     F+EAL  F +M+    + +  T   VL AC     +   K  H    K     D
Sbjct: 289 LAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCD 348

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           L +  AL+D+Y K G I  A ++F  M  ++V  W+ +I   A      DA+ LF +M  
Sbjct: 349 LVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEH 408

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
             + P+  TF+++L AC+    +D G     ++  +  +   +     ++D+  +  +++
Sbjct: 409 DKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVD 468

Query: 396 NSVELFAESP-KRNHVTWNTMI-----VGYVQLGE-VGKAMI 430
           +++      P K N V W T++      G+  L E +G+ +I
Sbjct: 469 DALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVI 510


>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Cucumis sativus]
          Length = 598

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 233/560 (41%), Positives = 332/560 (59%), Gaps = 12/560 (2%)

Query: 257 TIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIA 316
           ++R     H   LK   +    V+  L++LY+K+     + ++F+E PKK    WS +I+
Sbjct: 40  SLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVIS 99

Query: 317 RYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLS 376
            +AQ +  + A++ F RM    V P+   + S  +AC  +   D+G  +H L V+ G   
Sbjct: 100 AFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYC 159

Query: 377 DVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML 436
           DVFV ++L+D+YAKCG + ++  LF E P+RN V+W+ MI GY QL +  +A+ +F + L
Sbjct: 160 DVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQAL 219

Query: 437 EEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSIT 496
            E V   + T+SSV+R C+S   LE G  +H L +K ++D    V +ALI +Y+KCG I 
Sbjct: 220 IEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIE 279

Query: 497 DARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS 556
            A  VFD +   N   WN+M+   + H  +  V  +F+ M   G +PN ++F+ VL ACS
Sbjct: 280 GAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACS 339

Query: 557 NGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIW 616
           + GL+E+G  YF S++ +YGIEP  EHY S+V LLGRAG L +A  +I+ +P +P+  +W
Sbjct: 340 HAGLVEKGREYF-SLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVW 398

Query: 617 RALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA--------- 667
            ALL  C IH + E+    A  IL+ +      HVLLSN YA A  +E+AA         
Sbjct: 399 GALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDR 458

Query: 668 --SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDV 725
              KE GLSW+E    VH F AGD SHA    I   LE L  +  KAGY+ D S VLR V
Sbjct: 459 GVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAV 518

Query: 726 REDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIII 785
             +EK   +  HSE+LA+AF L   PP  PIR++KNLR+C DCH AIK +SK   R +I+
Sbjct: 519 DGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIV 578

Query: 786 RDVHRFHHFQDGCCSCGDFW 805
           RD +RFH F+DG CSCGD+W
Sbjct: 579 RDNNRFHRFEDGKCSCGDYW 598



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 163/299 (54%), Gaps = 1/299 (0%)

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           AL FF +M   G +P++  +    KAC  L    V KS H  A+KT Y  D++V  +L+D
Sbjct: 110 ALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVD 169

Query: 286 LYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFT 345
           +Y K GEI +AR +F+EMP+++V+ WS MI  YAQ D  ++A+ LF +     V  N FT
Sbjct: 170 MYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFT 229

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           F SV++ C++   L+LG  IH L +++   S  FV +AL+ +Y+KCG +E + ++F E P
Sbjct: 230 FSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIP 289

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
            RN   WN+M++   Q     +   +F +M    +    +++ SVL AC+    +E G +
Sbjct: 290 TRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGRE 349

Query: 466 VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN-DWNEVSWNAMISGYSMH 523
              L      + +     +L+D+  + G + +A  V   M     E  W A+++G  +H
Sbjct: 350 YFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIH 408



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 96/402 (23%), Positives = 185/402 (46%), Gaps = 17/402 (4%)

Query: 34  LSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFA 93
           LST      +  P+  +  E N       L S  ++  L+  + +H  +LK G       
Sbjct: 3   LSTSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLV 62

Query: 94  TNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGH 153
           ++ L+N+Y K      + ++FDE P++++ ++ + I  +  +   + A+  F  +  +G 
Sbjct: 63  SHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGV 122

Query: 154 ELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARK 213
             +   + +  K    +  +++   V     K G+  + FVG++L+D ++ CG +  AR 
Sbjct: 123 RPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARH 182

Query: 214 VFDGLFN----------------DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDT 257
           +FD +                  D   EAL  F Q        N+FTF+ V++ C     
Sbjct: 183 LFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTF 242

Query: 258 IRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIAR 317
           + + K  HG  LK  ++   +V  AL+ LY+K G I  A ++F+E+P +++  W+ M+  
Sbjct: 243 LELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIA 302

Query: 318 YAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD 377
            AQ   +     LF  M    + PN  +F+SVL AC+    ++ G +  SL+   G+  +
Sbjct: 303 CAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPE 362

Query: 378 VFVSNALMDVYAKCGRMENSVELFAESPKR-NHVTWNTMIVG 418
                +L+D+  + G+++ +V +  + P R     W  ++ G
Sbjct: 363 TEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTG 404


>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 833

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 292/837 (34%), Positives = 435/837 (51%), Gaps = 116/837 (13%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNV--LLNVYVKLNRLPDATKLF 114
           HS   S Q C     L  A  +H Q +  G+ L+ + TNV  L+  Y+  N + +A  L 
Sbjct: 25  HSSTISKQQC---KTLTQAKLLHQQYIINGHLLNSY-TNVTNLIYTYISSNSITNAILLL 80

Query: 115 DE--MPERNTISFVTTIQGYTVS-SQFVEAVGLF---STLH-REGHELNPFAFTAFLKVL 167
           ++   P  +++ +   +  + +  +    A+ LF    TLH    H   PF F A  ++ 
Sbjct: 81  EKNVTPSHSSVYWWNQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEI- 139

Query: 168 VSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL--------- 218
                 EL   +  CV +LG +SN FV  A+I  +  C  V  ARKVFD L         
Sbjct: 140 ---SNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSV 196

Query: 219 --------FNDCF--EEALNFFSQMR-AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGC 267
                   ++ CF    A++ F +M    G  P+      +L  C  L      +  HG 
Sbjct: 197 TWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGF 256

Query: 268 ALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDA 327
            +++    D++V  AL+D+Y K G++ +A ++FE M  KDV+ W+ M+  Y+Q     DA
Sbjct: 257 CVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDA 316

Query: 328 VELFCRMRQAFVA-----------------------------------PNQFTFVSVLQA 352
           + LF +MR+  +                                    PN  T +S+L A
Sbjct: 317 LSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSA 376

Query: 353 CATMEGLDLGNQIHSLVVRVGL-------LSDVFVSNALMDVYAKCGRMENSVELFAE-S 404
           CA++  L  G + H   V+  L         D+ V NAL+D+YAKC  +E +  +F E  
Sbjct: 377 CASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEIC 436

Query: 405 PK-RNHVTWNTMIVGYVQLGEVGKAMIMFSKM--LEEQVPATEVTYSSVLRACASLAALE 461
           PK R+ VTW  MI GY Q G+   A+ +FS+M  ++  +   + T S VL ACA LAAL+
Sbjct: 437 PKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALK 496

Query: 462 PGMQVHCLTVK-ANYDMDVV-VANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
            G Q+H   ++ +  D DV+ VAN LIDMY+K G +  A++VFD M+  N VSW ++++G
Sbjct: 497 FGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTG 556

Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
           Y MHG S +  +VFD M++     + +TF+ VL ACS+ G+             ++G++P
Sbjct: 557 YGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGM-------------DFGVDP 603

Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHI 639
            +EHY  MV LLGRAG L +A +LI  +P +P+ ++W ALL AC IH+N E+   +A+ +
Sbjct: 604 GVEHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSACRIHSNEELAEFAAKKL 663

Query: 640 LDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAG 688
           L+ + +++ T+ LLSNIYA AR W+  A            K PG SW++ +  +  F  G
Sbjct: 664 LELKADNDGTYTLLSNIYANARRWKDVARIGYLMKRTGIKKIPGWSWVKGRKGMETFYVG 723

Query: 689 DTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALF 748
           D +H     I   L  L +K  KA +       L DV ++EK   L  HSEKLALA+A+ 
Sbjct: 724 DRTHLQSQKIYETLADL-IKRIKANF------SLHDVDDEEKGDQLSEHSEKLALAYAIL 776

Query: 749 KMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            +PP +PIRI KNLRIC D H+AI  IS IV+ EII+RD  RFH F++G CSC  +W
Sbjct: 777 TLPPGAPIRITKNLRICGDFHSAITYISMIVEHEIILRDSSRFHQFKNGSCSCKGYW 833


>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
 gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
          Length = 941

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 254/785 (32%), Positives = 413/785 (52%), Gaps = 35/785 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  ++ T +  C +   L     IH +++ +G   D    N L+++Y       D   +F
Sbjct: 158 NQVTFVTIVDVCAKLRLLDLGRKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVF 217

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             M + + + + T I G + + Q+ E + +F  +  EG + N   + + ++V  ++   +
Sbjct: 218 SRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVK 277

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND-----------CF 223
               + A + +    S+  + T+LI  +  CG ++ A+ + + ++             C 
Sbjct: 278 EGEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACA 337

Query: 224 E-----EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
           +     EA++   +M   GF  N  T+  VL+AC  L+ +   +  H   L  C  +   
Sbjct: 338 QNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHARVL-LCGLLQRE 396

Query: 279 VAV--ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           VAV  +++ +Y K G+   A  +FE MP+KD + W+ +I          DA+ELF  M  
Sbjct: 397 VAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMEL 456

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD-VFVSNALMDVYAKCGRME 395
             +  N+FT +S+L+AC  +E L L  QIH+     G   +   V N+++++YA+CG + 
Sbjct: 457 EGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLL 516

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQL--GEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           ++ + F    ++  V W+ ++  Y Q   G   +A   F +M  E +   EVT+ S L A
Sbjct: 517 DAKKAFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDA 576

Query: 454 CASLAALEPGMQVHCLTVKANY-DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS 512
           CA++A LE G  +H     + + +  +V+ N +I+MY KCGS +DA+LVFD M +   +S
Sbjct: 577 CAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLIS 636

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
           WN++I  Y+ +G + E L     M  +G+ P++ T V +L   S+ GLLE+G  +F+S +
Sbjct: 637 WNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSI 696

Query: 573 ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF-QPSVMIWRALLGACIIHNNVEI 631
            ++G+EP       +V LL R G LD A +LI   P  Q   + W  LL AC  + + + 
Sbjct: 697 QDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTIAWMTLLAACKSYGDPQR 756

Query: 632 GRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQG 680
           G   A+ + + EP+   + V+L+N+YA    W  A+            KEPG SWIE  G
Sbjct: 757 GIRCAERVFELEPQHSGSFVVLANLYASVGRWSDASRIRKMMERMSVKKEPGCSWIELSG 816

Query: 681 MVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEK 740
            VH F +G++ H  +  I   LE L ++ R+AGY+PD + V+ DV E +KE  L  HSE+
Sbjct: 817 SVHEFISGESKHPKIREICEDLEKLTLRMREAGYVPDTTNVVHDVEEGDKEEILSRHSER 876

Query: 741 LALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCS 800
           LA+ F L    P   IR++KNLR+C DCH A KIIS +V REI++RD  RFHHF+ G CS
Sbjct: 877 LAIVFGLMSTRPGETIRVVKNLRVCSDCHAATKIISSVVGREIVVRDSSRFHHFKHGQCS 936

Query: 801 CGDFW 805
           CGDFW
Sbjct: 937 CGDFW 941



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 166/643 (25%), Positives = 311/643 (48%), Gaps = 22/643 (3%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           +  +L +C  + +L     IH  V+  G   ++  +N L+N+Y K   +P A K+FD M 
Sbjct: 61  FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
            R+ +S+   +  Y  +  + +A+   S +  EG + N   F   + V   +   +L   
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDC 222
           +   +   G + +  +G AL+  +  CG  +  + VF  +                 N  
Sbjct: 181 IHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQ 240

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
           +EE L  F +M   G K N  T+  +++ C  LD ++  +      L++ +     +A +
Sbjct: 241 YEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATS 300

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+ LY + G +  A+ + E M ++DV+ W+ M+   AQ   + +A+ L  RM       N
Sbjct: 301 LISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGAN 360

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLS-DVFVSNALMDVYAKCGRMENSVELF 401
           + T++SVL+ACA +E L  G +IH+ V+  GLL  +V V N+++ +Y KCG+ E ++ +F
Sbjct: 361 KVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVF 420

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
              P+++ V+WN +I   V   +   A+ +F  M  E + + E T  S+L AC  L  L+
Sbjct: 421 EAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLK 480

Query: 462 PGMQVHCLTVKANYDMD-VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY 520
              Q+H       +  +   V N++++MYA+CGS+ DA+  FD + +   V+W+ +++ Y
Sbjct: 481 LARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAY 540

Query: 521 --SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
             S  G      K F  M+  G +P  +TFV  L AC+    LE G +  +   A+  +E
Sbjct: 541 AQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVE 600

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
             +    +++++ G+ G    A  + + +P +  ++ W +L+ A   HN   +  LS+  
Sbjct: 601 TSLVLGNTIINMYGKCGSPSDAKLVFDQMP-EKCLISWNSLIVA-YAHNGHALEALSSLQ 658

Query: 639 ILDFEPEDEATHVLLSNIYAMARSWEKAASKEPGLSWIENQGM 681
            +  +  D  +   +S +Y ++ +       E   S I++ G+
Sbjct: 659 EMLLQGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGL 701



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 146/542 (26%), Positives = 252/542 (46%), Gaps = 22/542 (4%)

Query: 100 VYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFA 159
           +Y K  R+ DA  +FD +  +N  S+   +  Y+ +  + EA+ LF+ +  EG   +   
Sbjct: 1   MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60

Query: 160 FTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF 219
           F   L    + G  +    + + V   G  SN  +  +L++ +  C  V  A KVFDG+ 
Sbjct: 61  FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120

Query: 220 ----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKS 263
                           N C+ +AL   S+M A G KPN  TF  ++  C  L  + + + 
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180

Query: 264 AHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDL 323
            H   +    E D  +  AL+ +Y   G   + + +F  M +  V+ W+ MIA  +Q   
Sbjct: 181 IHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQ 240

Query: 324 SIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNA 383
             + + +F +M    V  N+ T++S+++ C  ++ +  G  I + ++     S   ++ +
Sbjct: 241 YEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATS 300

Query: 384 LMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPAT 443
           L+ +Y +CG ++ +  L     +R+ V WN M+    Q G+  +A+ +  +M  E   A 
Sbjct: 301 LISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGAN 360

Query: 444 EVTYSSVLRACASLAALEPGMQVHCLTVKAN-YDMDVVVANALIDMYAKCGSITDARLVF 502
           +VTY SVL ACA+L AL  G ++H   +       +V V N++I MY KCG    A  VF
Sbjct: 361 KVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVF 420

Query: 503 DMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGL-- 560
           + M   ++VSWNA+I+    +    + L++F  M+  G R N  T + +L AC  GGL  
Sbjct: 421 EAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEAC--GGLED 478

Query: 561 LEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
           L+          A            S+V++  R G L  A K  + +  +  ++ W  +L
Sbjct: 479 LKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLE-EKGLVAWSIIL 537

Query: 621 GA 622
            A
Sbjct: 538 AA 539



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 122/439 (27%), Positives = 224/439 (51%), Gaps = 17/439 (3%)

Query: 202 FSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRAVGFKPNNFTF 245
           +  C  V  A  VFDG+                 N  + EAL  F++M+  G +P+   F
Sbjct: 2   YGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVVF 61

Query: 246 AFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPK 305
              L AC     +   +  H   + +    ++ ++ +L+++Y K  ++  A ++F+ M  
Sbjct: 62  VIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLL 121

Query: 306 KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
           +DV+ W+ M+A YAQ      A+E   RM    V PNQ TFV+++  CA +  LDLG +I
Sbjct: 122 RDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKI 181

Query: 366 HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEV 425
           H  ++  GL  D  + NAL+ +Y  CG  ++   +F+   + + + W TMI G  Q G+ 
Sbjct: 182 HHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQY 241

Query: 426 GKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANAL 485
            + +++F KM  E V A EVTY S++  C +L A++ G  +    +++ +    ++A +L
Sbjct: 242 EEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSL 301

Query: 486 IDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNN 545
           I +Y +CG +  A+ + + M   + V+WNAM++  + +G + E + +   M   G+  N 
Sbjct: 302 ISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANK 361

Query: 546 LTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
           +T++ VL AC+N   L QG      ++    ++  +    S++++ G+ G  + A  + E
Sbjct: 362 VTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFE 421

Query: 606 GIPFQPSVMIWRALLGACI 624
            +P +  V  W A++ A +
Sbjct: 422 AMPRKDDVS-WNAVINASV 439



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/338 (32%), Positives = 185/338 (54%), Gaps = 2/338 (0%)

Query: 286 LYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFT 345
           +Y K   +++A  +F+ +  K+V  W+ M+A Y+Q     +A+ELF RM+     P++  
Sbjct: 1   MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           FV  L ACA    LD G QIHS VV  GL S++ +SN+L+++Y KC  +  + ++F    
Sbjct: 61  FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
            R+ V+W  M+  Y Q G   +A+   S+M  E V   +VT+ +++  CA L  L+ G +
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180

Query: 466 VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGL 525
           +H   +    + D ++ NAL+ MY  CGS  D + VF  M   + + W  MI+G S +G 
Sbjct: 181 IHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQ 240

Query: 526 SAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYT 585
             E L VF  M   G + N +T++ ++  C N   +++GE     ++ +      +   T
Sbjct: 241 YEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTL-LAT 299

Query: 586 SMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGAC 623
           S++SL G+ G LD+A  L+E + +Q  V+ W A++ AC
Sbjct: 300 SLISLYGQCGILDRAKGLLEHM-YQRDVVAWNAMVTAC 336


>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 637

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 230/570 (40%), Positives = 338/570 (59%), Gaps = 12/570 (2%)

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
           +L++C+   ++R  +  HG  L +    D  ++  L+DLY   G++ +ARR+F+ MPK++
Sbjct: 68  ILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKRN 127

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
           V  W+ +I  YA+      AV L+  M +  V P+ FT+  VL+ACA +  L+ G ++H 
Sbjct: 128 VFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQ 187

Query: 368 LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK 427
            V       DVFV   ++D+YAKCG ++++  +F     R+ V WN+MI  Y Q G   +
Sbjct: 188 RVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPME 247

Query: 428 AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALID 487
           A+ +   M    +  T  T  S + A A  AAL  G ++H    +  + +   +  +L+D
Sbjct: 248 ALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLVD 307

Query: 488 MYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW-RPNNL 546
           MYAK G +  AR++F+ +     VSWNAMI GY MHG + E L +F+ M+      P+N+
Sbjct: 308 MYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPDNI 367

Query: 547 TFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEG 606
           TFVGVLSAC++GG++E+ + +F  MV  Y I+P ++HYT ++ +LG  G  ++A  LI+G
Sbjct: 368 TFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLIKG 427

Query: 607 IPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKA 666
           +  +P   IW ALL  C IH NVE+G L+ Q +++ EPED   +V LSNIYA +  WEKA
Sbjct: 428 MSIEPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVHLSNIYAQSGKWEKA 487

Query: 667 A-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYI 715
           A            K    SWIE +G  H F  GD SH   + I G LE L      AGY+
Sbjct: 488 ARVRKLMTNRGLKKILACSWIELKGKTHGFLVGDASHPRSDEIYGELERLEGLMSDAGYV 547

Query: 716 PDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKII 775
           PD+  V  +V +DEK   +  HSE+LA+AF L   PP + + + KNLR+C DCH  IK+I
Sbjct: 548 PDIIPVFHNVDDDEKRNMVRSHSERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVIKLI 607

Query: 776 SKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           S+IVQREIIIRDV+R+HHF +G CSC D+W
Sbjct: 608 SQIVQREIIIRDVNRYHHFVNGECSCKDYW 637



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 174/361 (48%), Gaps = 23/361 (6%)

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG-------LFNDCF---------EEA 226
           V  LG D+   + T L+D ++ CG V  AR++FDG       L+N            E A
Sbjct: 90  VSGLGPDT--VLSTKLVDLYAACGQVGHARRLFDGMPKRNVFLWNVLIRAYAREGPREAA 147

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           +  +  M   G +P+NFT+  VLKAC  L  +   +  H     T +  D++V   ++D+
Sbjct: 148 VRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDM 207

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y K G + +AR +F+ +  +D + W+ MIA Y Q    ++A+ L   M    + P   T 
Sbjct: 208 YAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEALALCRDMAANGIGPTIATL 267

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
           VS + A A    L  G ++H    R G      +  +L+D+YAK G ++ +  LF +  K
Sbjct: 268 VSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMK 327

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKML-EEQVPATEVTYSSVLRACASLAALEPGMQ 465
           R  V+WN MI GY   G   +A+ +F+KM  + QV    +T+  VL AC     +E   +
Sbjct: 328 RELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPDNITFVGVLSACNHGGMVEEAKE 387

Query: 466 VHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSM 522
              L V A Y +   V +   +ID+    G   +A  L+  M  + +   W A+++G  +
Sbjct: 388 FFYLMVNA-YSIKPTVQHYTCVIDVLGHTGRFEEAYDLIKGMSIEPDSGIWGALLNGCKI 446

Query: 523 H 523
           H
Sbjct: 447 H 447



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/285 (32%), Positives = 147/285 (51%), Gaps = 4/285 (1%)

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
            S+LQ+C     L  G Q+H  ++  GL  D  +S  L+D+YA CG++ ++  LF   PK
Sbjct: 66  TSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPK 125

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
           RN   WN +I  Y + G    A+ ++  M+E  V     TY  VL+ACA+L  LE G +V
Sbjct: 126 RNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREV 185

Query: 467 HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLS 526
           H       +  DV V   ++DMYAKCG + DAR VFD +   + V WN+MI+ Y  +G  
Sbjct: 186 HQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRP 245

Query: 527 AEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG-EAYFKSMVANYGIEPCIEHYT 585
            E L +   M   G  P   T V  +SA ++   L +G E +       +G++  ++  T
Sbjct: 246 MEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLK--T 303

Query: 586 SMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
           S+V +  ++G +  A  L E +  +  ++ W A++    +H + +
Sbjct: 304 SLVDMYAKSGWVQVARVLFEQL-MKRELVSWNAMICGYGMHGHAD 347



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 108/424 (25%), Positives = 183/424 (43%), Gaps = 26/424 (6%)

Query: 26  RGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKK 85
           R L      +      ST   +  S   ++ H+  + LQSC+ +  L+    +H ++L  
Sbjct: 34  RALPPNTGFAASPPPPSTNPRLASSPHAYHHHT--SILQSCVASGSLRAGRQLHGRLLVS 91

Query: 86  GNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLF 145
           G   D   +  L+++Y    ++  A +LFD MP+RN   +   I+ Y        AV L+
Sbjct: 92  GLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKRNVFLWNVLIRAYAREGPREAAVRLY 151

Query: 146 STLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVC 205
             +   G E + F +   LK   ++   E    V   V       + FV   ++D ++ C
Sbjct: 152 RGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMYAKC 211

Query: 206 GCVEFARKVFDGLF----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVL 249
           GCV+ AR VFDG+                 N    EAL     M A G  P   T    +
Sbjct: 212 GCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEALALCRDMAANGIGPTIATLVSAV 271

Query: 250 KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
            A      +   +  HG   +  + +   +  +L+D+Y KSG +  AR +FE++ K++++
Sbjct: 272 SAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELV 331

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMR-QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSL 368
            W+ MI  Y     + +A+ LF +M+  A V P+  TFV VL AC     ++   +   L
Sbjct: 332 SWNAMICGYGMHGHADEALALFNKMKGDAQVTPDNITFVGVLSACNHGGMVEEAKEFFYL 391

Query: 369 VVRV-GLLSDVFVSNALMDVYAKCGRMENSVELF-AESPKRNHVTWNTMIVG-----YVQ 421
           +V    +   V     ++DV    GR E + +L    S + +   W  ++ G      V+
Sbjct: 392 MVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLIKGMSIEPDSGIWGALLNGCKIHKNVE 451

Query: 422 LGEV 425
           LGE+
Sbjct: 452 LGEL 455



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 92/177 (51%), Gaps = 4/177 (2%)

Query: 447 YSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN 506
           ++S+L++C +  +L  G Q+H   + +    D V++  L+D+YA CG +  AR +FD M 
Sbjct: 65  HTSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMP 124

Query: 507 DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG-E 565
             N   WN +I  Y+  G     ++++  M + G  P+N T+  VL AC+    LE G E
Sbjct: 125 KRNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGRE 184

Query: 566 AYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
            + +     +G +  +     +V +  + G +D A  + +GI  + +V +W +++ A
Sbjct: 185 VHQRVSGTRWGQDVFV--CAGVVDMYAKCGCVDDARAVFDGIAVRDAV-VWNSMIAA 238


>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 870

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 258/782 (32%), Positives = 400/782 (51%), Gaps = 32/782 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKG---NCLDLFATNVLLNVYVKLNRLPDAT 111
           +  SY   LQ C +   L+     H  V       + +D      L+ +Y+K   L +A 
Sbjct: 90  DDRSYGAVLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDNVLGQKLVLMYLKCGDLENAR 149

Query: 112 KLFDEMPERNTISFVTTI-QGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSM 170
           ++FDEMP+ + +   T +  GY  +    E V LF  +H  G   + +  +  LK +  +
Sbjct: 150 RVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGL 209

Query: 171 GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL------------ 218
           G  E    V   + KLG  S   VG AL+  ++     + A  VFDG+            
Sbjct: 210 GSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMI 269

Query: 219 ----FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
                N  +++A+  F +M   G + ++ T   VL AC  L  + + +  HG ++KT + 
Sbjct: 270 SGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFI 329

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
               +A  LLD+Y+   +  +  +IF  M +K+V+ W+ MI  Y +  L      LF  M
Sbjct: 330 SQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEM 389

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
                 P+ F   S L A A  E L  G  +H   +R G+   + V+NALM++Y KCG M
Sbjct: 390 GLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNM 449

Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
           E +  +F     ++ ++WNT+I GY +     +A  +F++ML +  P   VT + +L A 
Sbjct: 450 EEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQLRP-NAVTMTCILPAA 508

Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
           ASL++LE G ++H   ++  Y  D  VANALIDMY KCG++  AR +FD +++ N +SW 
Sbjct: 509 ASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWT 568

Query: 515 AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
            M++GY MHG   + + +F+ M+  G  P+  +F  +L ACS+ GL ++G  +F +M   
Sbjct: 569 IMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKE 628

Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL 634
           + IEP ++HYT MV LL   G+L +A + I+ +P +P   IW +LL  C IH NV++   
Sbjct: 629 HKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEE 688

Query: 635 SAQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVH 683
            A+ + + EPE+   +VLL+NIYA A  WE           +   +  G SWIE +G VH
Sbjct: 689 VAERVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKIGGRGLRENTGCSWIEAKGKVH 748

Query: 684 YFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLAL 743
            F A + +H     I   L  +  + ++ G+ P     L           L  HS KLA+
Sbjct: 749 VFIADNRNHPQGTRIAEFLNEVAKRMQEEGHDPKKKYALMGADNAVHGEALCGHSSKLAV 808

Query: 744 AFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGD 803
           AF +  +     IR+ KN R+C  CH A K ISK+  REII+RD +RFHHF+ G CSC  
Sbjct: 809 AFGVLNLSEGRLIRVTKNSRVCSHCHEAAKFISKMCSREIILRDSNRFHHFEQGRCSCRG 868

Query: 804 FW 805
           +W
Sbjct: 869 YW 870



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 150/318 (47%), Gaps = 17/318 (5%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E +S +  + L +C +   L     +H   +K G        NVLL++Y   +      K
Sbjct: 294 ELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNK 353

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +F  M ++N +S+   I  YT +  + +  GLF  +  EG   + FA T+ L        
Sbjct: 354 IFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNEL 413

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------------- 219
            +    V     + G +    V  AL++ +  CG +E A+ +FDG+              
Sbjct: 414 LKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGG 473

Query: 220 ---NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
              N+   EA + F++M  +  +PN  T   +L A   L ++   +  H  AL+  Y  D
Sbjct: 474 YSRNNLANEAFSLFTEM-LLQLRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLED 532

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
            +VA AL+D+Y K G +  ARR+F+ +  K++I W+ M+A Y       DA+ LF +MR 
Sbjct: 533 DFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRV 592

Query: 337 AFVAPNQFTFVSVLQACA 354
           + +AP+  +F ++L AC+
Sbjct: 593 SGIAPDAASFSAILYACS 610


>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At5g52630-like [Cucumis
           sativus]
          Length = 598

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 233/560 (41%), Positives = 331/560 (59%), Gaps = 12/560 (2%)

Query: 257 TIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIA 316
           ++R     H   LK   +    V+  L++LY+K+     + ++F+E PKK    WS +I+
Sbjct: 40  SLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVIS 99

Query: 317 RYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLS 376
            +AQ +  + A++ F RM    V P+   + S  +AC  +   D+G  +H L V+ G   
Sbjct: 100 AFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYC 159

Query: 377 DVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML 436
           DVFV ++L+D+YAKCG + ++  LF E P+RN V+W+ MI GY QL +  +A+ +F + L
Sbjct: 160 DVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQAL 219

Query: 437 EEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSIT 496
            E V   + T+SSV+R C+S   LE G  +H L +K ++D    V +ALI +Y+KCG I 
Sbjct: 220 IEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIE 279

Query: 497 DARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS 556
            A  VFD +   N   WN+M+   + H  +  V  +F+ M   G +PN + F+ VL ACS
Sbjct: 280 GAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACS 339

Query: 557 NGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIW 616
           + GL+E+G  YF S++ +YGIEP  EHY S+V LLGRAG L +A  +I+ +P +P+  +W
Sbjct: 340 HAGLVEKGREYF-SLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVW 398

Query: 617 RALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA--------- 667
            ALL  C IH + E+    A  IL+ +      HVLLSN YA A  +E+AA         
Sbjct: 399 GALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDR 458

Query: 668 --SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDV 725
              KE GLSW+E    VH F AGD SHA    I   LE L  +  KAGY+ D S VLR V
Sbjct: 459 GVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAV 518

Query: 726 REDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIII 785
             +EK   +  HSE+LA+AF L   PP  PIR++KNLR+C DCH AIK +SK   R +I+
Sbjct: 519 DGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIV 578

Query: 786 RDVHRFHHFQDGCCSCGDFW 805
           RD +RFH F+DG CSCGD+W
Sbjct: 579 RDNNRFHRFEDGKCSCGDYW 598



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 162/299 (54%), Gaps = 1/299 (0%)

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           AL FF +M   G +P++  +    KAC  L    V KS H  A+KT Y  D++V  +L+D
Sbjct: 110 ALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVD 169

Query: 286 LYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFT 345
           +Y K GEI +AR +F+EMP+++V+ WS MI  YAQ D  ++A+ LF +     V  N FT
Sbjct: 170 MYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFT 229

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           F SV++ C++   L+LG  IH L +++   S  FV +AL+ +Y+KCG +E + ++F E P
Sbjct: 230 FSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIP 289

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
            RN   WN+M++   Q     +   +F +M    +    + + SVL AC+    +E G +
Sbjct: 290 TRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACSHAGLVEKGRE 349

Query: 466 VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN-DWNEVSWNAMISGYSMH 523
              L      + +     +L+D+  + G + +A  V   M     E  W A+++G  +H
Sbjct: 350 YFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIH 408



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/402 (23%), Positives = 184/402 (45%), Gaps = 17/402 (4%)

Query: 34  LSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFA 93
           LST      +  P+  +  E N       L S  ++  L+  + +H  +LK G       
Sbjct: 3   LSTSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLV 62

Query: 94  TNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGH 153
           ++ L+N+Y K      + ++FDE P++++ ++ + I  +  +   + A+  F  +  +G 
Sbjct: 63  SHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGV 122

Query: 154 ELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARK 213
             +   + +  K    +  +++   V     K G+  + FVG++L+D ++ CG +  AR 
Sbjct: 123 RPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARH 182

Query: 214 VFDGLFN----------------DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDT 257
           +FD +                  D   EAL  F Q        N+FTF+ V++ C     
Sbjct: 183 LFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTF 242

Query: 258 IRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIAR 317
           + + K  HG  LK  ++   +V  AL+ LY+K G I  A ++F+E+P +++  W+ M+  
Sbjct: 243 LELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIA 302

Query: 318 YAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD 377
            AQ   +     LF  M    + PN   F+SVL AC+    ++ G +  SL+   G+  +
Sbjct: 303 CAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACSHAGLVEKGREYFSLMRDYGIEPE 362

Query: 378 VFVSNALMDVYAKCGRMENSVELFAESPKR-NHVTWNTMIVG 418
                +L+D+  + G+++ +V +  + P R     W  ++ G
Sbjct: 363 TEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTG 404


>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
 gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
          Length = 855

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 266/820 (32%), Positives = 414/820 (50%), Gaps = 85/820 (10%)

Query: 68  QNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM-PERNTISFV 126
           Q   L  A   H Q+   G   ++F+  V    Y++     +A  L   + P  +T+ + 
Sbjct: 39  QCKTLINAKLAHQQIFVHG-FTEMFSYAV--GAYIECGASAEAVSLLQRLIPSHSTVFWW 95

Query: 127 TTIQGYTVSSQFVE-AVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYK 185
             +   +V    ++  +G +  + R G   + + F   LK    +        V A V  
Sbjct: 96  NALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCA 155

Query: 186 LGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRA---------- 235
            G  SN F+  +++  +  CG ++ A ++FD +     E+ +++ S + A          
Sbjct: 156 NGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTA 215

Query: 236 ------------VGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
                       +  +P+  T   +L AC  +  ++  K  HG +++     D++V  AL
Sbjct: 216 LRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNAL 275

Query: 284 LDLYTKSGEISNARRIFEEMPKKDVIPWSFM----------------------------- 314
           + +Y K  +++ A ++FE + KKDV+ W+ M                             
Sbjct: 276 VSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDV 335

Query: 315 ------IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSL 368
                 IA YAQ     +A+++F +M+   + PN  T  S+L  CA++  L  G Q H+ 
Sbjct: 336 ITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAY 395

Query: 369 VVRVGL-------LSDVFVSNALMDVYAKCG--RMENSVELFAESPKRNHVTWNTMIVGY 419
           V++  L         D+ V N L+D+YAKC   R+  S+    E   +N VTW  MI GY
Sbjct: 396 VIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGY 455

Query: 420 VQLGEVGKAMIMFSKMLEEQ--VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM 477
            Q GE   A+ +F+++ +++  +     T S  L ACA L  L  G Q+H   ++   + 
Sbjct: 456 AQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENES 515

Query: 478 DVV-VANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLM 536
           +V+ V N LIDMY+K G I  AR VFD M   N VSW ++++GY MHG   E L +FD M
Sbjct: 516 EVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQM 575

Query: 537 QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGH 596
           Q+ G+  + +TF+ VL ACS+ G+++QG  YF  MV  +GI P  EHY  MV LLGRAG 
Sbjct: 576 QKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGR 635

Query: 597 LDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNI 656
           L++A +LI+ +  +P+ ++W ALL A  IH N+E+G  +A  + +   E++ ++ LLSN+
Sbjct: 636 LNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGAENDGSYTLLSNL 695

Query: 657 YAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWL 705
           YA AR W+  A            K PG SWI+ +     F  GD SH +   I  +L  L
Sbjct: 696 YANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKSTTTFFVGDRSHPESEQIYNLLLDL 755

Query: 706 NMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRIC 765
             + +  GY+P  S  L DV ++EK   L+ HSEKLA+A+ +    P  PIRI KNLRIC
Sbjct: 756 IKRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTTAPGQPIRIHKNLRIC 815

Query: 766 VDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            DCH+A+  IS I+  EI++RD  RFHHF+ G CSC  +W
Sbjct: 816 GDCHSALTYISMIIDHEIVLRDSSRFHHFKKGSCSCRSYW 855



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 139/547 (25%), Positives = 239/547 (43%), Gaps = 85/547 (15%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           + +++   L++C +   L+   ++H  V   G   ++F  N ++ +Y +   L DA ++F
Sbjct: 126 DHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMF 185

Query: 115 DEMPER---NTISFVTTIQGYTVSSQFVEAVGL-FSTLHREGHELNPFAFTAFLKVLVSM 170
           DE+ ER   + +S+ + +  Y    Q   A+ + F   +    +L P A T  + +L + 
Sbjct: 186 DEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAIT-LVNILPA- 243

Query: 171 GWAELCPCVFACVY---------KLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG---- 217
                C  VFA  +         + G   + FVG AL+  ++ C  +  A KVF+G    
Sbjct: 244 -----CASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKK 298

Query: 218 -----------------------LFNDCFEE------------------------ALNFF 230
                                  LF    EE                        AL+ F
Sbjct: 299 DVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVF 358

Query: 231 SQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY-------EMDLYVAVAL 283
            QM+  G +PN  T A +L  C  +  +   K  H   +K          E DL V   L
Sbjct: 359 RQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGL 418

Query: 284 LDLYTKSGEISNARRIFEEMPKKD--VIPWSFMIARYAQTDLSIDAVELFCRM--RQAFV 339
           +D+Y K      AR IF+ +  KD  V+ W+ MI  YAQ   + DA++LF ++  ++  +
Sbjct: 419 IDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSL 478

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDV-FVSNALMDVYAKCGRMENSV 398
            PN FT    L ACA +  L LG Q+H+  +R    S+V +V N L+D+Y+K G ++ + 
Sbjct: 479 KPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAAR 538

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            +F     RN V+W +++ GY   G   +A+ +F +M +       +T+  VL AC+   
Sbjct: 539 AVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSG 598

Query: 459 ALEPGM-QVHCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAM 516
            ++ GM   H +               ++D+  + G + +A  L+ +M  +   V W A+
Sbjct: 599 MVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVAL 658

Query: 517 ISGYSMH 523
           +S   +H
Sbjct: 659 LSASRIH 665


>gi|297794157|ref|XP_002864963.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310798|gb|EFH41222.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 720

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 243/640 (37%), Positives = 366/640 (57%), Gaps = 32/640 (5%)

Query: 195 GTALIDAFSVCGCVEFARKVFDGL-------FNDCF---------EEALNFFSQMRAVGF 238
           G+ L+DA   CG + +AR++FDG+       +N            +EA+  +  M +   
Sbjct: 84  GSKLVDASLKCGEIGYARQLFDGMPERHIVTWNSIIAYYIKHRRSKEAVEMYRLMISNNV 143

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM-DLYVAVALLDLYTKSGEISNAR 297
            P+ +T + V KA   L   + A+ +HG A+    E+ +++V  AL+D+Y K G+   A+
Sbjct: 144 LPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAK 203

Query: 298 RIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATME 357
            + + + +KDV+  + +I  Y+Q     +AV+ F  M    V PN++T+ SVL +C  ++
Sbjct: 204 LVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLK 263

Query: 358 GLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIV 417
            +  G  IH L+V+ G  S +    +L+ +Y +C  +++S+ +F      N VTW ++I 
Sbjct: 264 DIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLLVFKCIKYPNQVTWTSLIS 323

Query: 418 GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM 477
           G VQ G    A+I F KM+ + V     T SS LR C++LA  E G QVH +  K  +D 
Sbjct: 324 GLVQNGREETALIEFRKMMRDSVKPNSFTLSSALRGCSNLAMFEEGRQVHGIVSKYGFDR 383

Query: 478 DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQ 537
           D    + LI++Y KCG    ARLVFD +++ + +S N MI  Y+ +G   E L++F+ M 
Sbjct: 384 DKYAGSGLIELYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALELFERMI 443

Query: 538 QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHL 597
             G +PN++T + VL AC+N GL+E+G   F S   +  I    +HY  MV +LGRAG L
Sbjct: 444 NLGLQPNDVTVLSVLLACNNSGLVEEGCELFDSFRKD-KIMLTNDHYACMVDMLGRAGRL 502

Query: 598 DKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIY 657
           ++A  LI  +   P +++WR LL AC +H  VE+     + IL+  P DE T +LLSN+Y
Sbjct: 503 EEAEMLITEVT-NPDLVLWRTLLSACKVHRKVEMAERITRKILEIAPGDEGTLILLSNLY 561

Query: 658 AMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDT-SHADMNIIRGMLEWL 705
           A    W++              K P +SW+E     H F AGD  SH +   I   LE L
Sbjct: 562 ASTGKWKRVIEMKSKMKEMKLKKNPAMSWVEIDKETHTFMAGDLFSHPNSEQILENLEEL 621

Query: 706 NMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRIC 765
             K++  GY+ D S V +D+ E  KER L  HSEKLA+AFA+++    S IRI+KNLR+C
Sbjct: 622 IKKAKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWRNVGGS-IRILKNLRVC 680

Query: 766 VDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           VDCH+ IKI+S+I++REII RD  RFHHF+DG CSCGD+W
Sbjct: 681 VDCHSWIKIVSRIIKREIICRDSKRFHHFRDGSCSCGDYW 720



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 119/489 (24%), Positives = 227/489 (46%), Gaps = 26/489 (5%)

Query: 56  SHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFD 115
           +H+++  L+ CI    +     I  Q+LK G  ++L  +  L++  +K   +  A +LFD
Sbjct: 47  THTFSQLLRQCIDERSISGIKNIQAQMLKSGFPVELSGSK-LVDASLKCGEIGYARQLFD 105

Query: 116 EMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAEL 175
            MPER+ +++ + I  Y    +  EAV ++  +       + +  ++  K    +   + 
Sbjct: 106 GMPERHIVTWNSIIAYYIKHRRSKEAVEMYRLMISNNVLPDEYTLSSVFKAFSDLSLEKE 165

Query: 176 CPCVFACVYKLGHD-SNAFVGTALIDAFSVCGCVEFARKVFDGL--------------FN 220
                     LG + SN FVG+AL+D +   G    A+ V D +              ++
Sbjct: 166 AQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYS 225

Query: 221 DCFE--EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
              E  EA+  F  M     +PN +T+A VL +C  L  I   K  HG  +K+ +E  L 
Sbjct: 226 QKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALA 285

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
              +LL +Y +   + ++  +F+ +   + + W+ +I+   Q      A+  F +M +  
Sbjct: 286 SQTSLLTMYLRCSLVDDSLLVFKCIKYPNQVTWTSLISGLVQNGREETALIEFRKMMRDS 345

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           V PN FT  S L+ C+ +   + G Q+H +V + G   D +  + L+++Y KCG  + + 
Sbjct: 346 VKPNSFTLSSALRGCSNLAMFEEGRQVHGIVSKYGFDRDKYAGSGLIELYGKCGCSDMAR 405

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            +F    + + ++ NTMI  Y Q G   +A+ +F +M+   +   +VT  SVL AC +  
Sbjct: 406 LVFDTLSEVDVISLNTMIYSYAQNGFGREALELFERMINLGLQPNDVTVLSVLLACNNSG 465

Query: 459 ALEPGMQVHCLTVKANYDMDVVVAN----ALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
            +E G    C    +     +++ N     ++DM  + G + +A ++   + + + V W 
Sbjct: 466 LVEEG----CELFDSFRKDKIMLTNDHYACMVDMLGRAGRLEEAEMLITEVTNPDLVLWR 521

Query: 515 AMISGYSMH 523
            ++S   +H
Sbjct: 522 TLLSACKVH 530



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 68/283 (24%), Positives = 124/283 (43%), Gaps = 26/283 (9%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N ++YA+ L SC    D+     IH  ++K G    L +   LL +Y++ + + D+  +F
Sbjct: 248 NEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLLVF 307

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             +   N +++ + I G   + +   A+  F  + R+  + N F  ++ L+   ++   E
Sbjct: 308 KCIKYPNQVTWTSLISGLVQNGREETALIEFRKMMRDSVKPNSFTLSSALRGCSNLAMFE 367

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
               V   V K G D + + G+ LI+ +  CGC + AR VFD L                
Sbjct: 368 EGRQVHGIVSKYGFDRDKYAGSGLIELYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYA 427

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            N    EAL  F +M  +G +PN+ T   VL AC     +       GC L   +  D  
Sbjct: 428 QNGFGREALELFERMINLGLQPNDVTVLSVLLACNNSGLVE-----EGCELFDSFRKDKI 482

Query: 279 VAV-----ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIA 316
           +        ++D+  ++G +  A  +  E+   D++ W  +++
Sbjct: 483 MLTNDHYACMVDMLGRAGRLEEAEMLITEVTNPDLVLWRTLLS 525


>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Brachypodium distachyon]
          Length = 802

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 218/562 (38%), Positives = 338/562 (60%), Gaps = 12/562 (2%)

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           P    +   + AC     +  A+  H     + +  D ++  +L+ LY K G +  A ++
Sbjct: 49  PTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKV 108

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL 359
           F++M  KD++ W+ +IA YAQ D+  +A+ L   M +    PN FTF S+L+A       
Sbjct: 109 FDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADS 168

Query: 360 DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGY 419
            +G QIH+L V+     DV+V +AL+D+YA+CG+M+ +  +F +   +N V+WN +I G+
Sbjct: 169 GIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGF 228

Query: 420 VQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDV 479
            + G+   A+++F++M      AT  TYSS+  A A + ALE G  VH   +K+   +  
Sbjct: 229 ARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTA 288

Query: 480 VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
            V N ++DMYAK GS+ DAR VF+ + + + V+WN+M++ ++ +GL  E +  F+ M++ 
Sbjct: 289 FVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKS 348

Query: 540 GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDK 599
           G   N ++F+ +L+ACS+GGL+++G+ YF  M+  Y +EP IEHY ++V LLGRAG L+ 
Sbjct: 349 GIYLNQISFLCILTACSHGGLVKEGKHYF-DMIKEYNLEPEIEHYVTVVDLLGRAGLLNY 407

Query: 600 AAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAM 659
           A   I  +P +P+  +W ALL AC +H N ++G+ +A H+   +P+D    VLL NIYA 
Sbjct: 408 ALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYAS 467

Query: 660 ARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMK 708
              W+ AA            KEP  SW+E +  VH F A D +H     I  M + ++MK
Sbjct: 468 TGHWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRAEEIYKMWDEISMK 527

Query: 709 SRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDC 768
            RK GY+PD+  VL  V E E+E  L  HSEK+ALAFAL +MP  + IRI+KN+RIC DC
Sbjct: 528 IRKEGYVPDMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRIMKNIRICGDC 587

Query: 769 HTAIKIISKIVQREIIIRDVHR 790
           H+A K ISK+ +REI+I  +H+
Sbjct: 588 HSAFKYISKVFEREIVIIHLHK 609



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 179/363 (49%), Gaps = 16/363 (4%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           Y   + +C Q+ +L  A  IH  +       D F  N L+++Y K   + +A K+FD+M 
Sbjct: 54  YHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDKMR 113

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
            ++ +S+ + I GY  +    EA+GL   + +   + N F F + LK + +   + +   
Sbjct: 114 NKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGIGGQ 173

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF-------- 223
           + A   K     + +VG+AL+D ++ CG ++ A  VFD L       +N           
Sbjct: 174 IHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGD 233

Query: 224 -EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
            E AL  F++M+  GF+  +FT++ +  A  G+  +   K  H   +K+  ++  +V   
Sbjct: 234 GETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVGNT 293

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           +LD+Y KSG + +AR++FE +  KD++ W+ M+  +AQ  L  +AV  F  MR++ +  N
Sbjct: 294 MLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLN 353

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           Q +F+ +L AC+    +  G     ++    L  ++     ++D+  + G +  ++    
Sbjct: 354 QISFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIF 413

Query: 403 ESP 405
           + P
Sbjct: 414 KMP 416



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 151/284 (53%), Gaps = 2/284 (0%)

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           +AP    + + + ACA  + LD   +IH+ +       D F+ N+L+ +Y KCG +  + 
Sbjct: 47  LAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAH 106

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
           ++F +   ++ V+W ++I GY Q     +A+ +   ML+ +      T++S+L+A  + A
Sbjct: 107 KVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYA 166

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
               G Q+H L VK ++  DV V +AL+DMYA+CG +  A  VFD ++  N VSWNA+IS
Sbjct: 167 DSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALIS 226

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           G++  G     L VF  MQ+ G+   + T+  + SA +  G LEQG+     M+ +    
Sbjct: 227 GFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKL 286

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
                 T M+ +  ++G +  A K+ E +     ++ W ++L A
Sbjct: 287 TAFVGNT-MLDMYAKSGSMIDARKVFERV-LNKDLVTWNSMLTA 328



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 171/351 (48%), Gaps = 17/351 (4%)

Query: 190 SNAFVGTALIDAFSVCGCVEFARKVFDGLFN----------------DCFEEALNFFSQM 233
            +AF+  +LI  +  CG V  A KVFD + N                D   EA+     M
Sbjct: 84  GDAFLDNSLIHLYCKCGSVVEAHKVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGM 143

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
               FKPN FTFA +LKA        +    H  A+K  +  D+YV  ALLD+Y + G++
Sbjct: 144 LKGRFKPNGFTFASLLKAVGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKM 203

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
             A  +F+++  K+ + W+ +I+ +A+      A+ +F  M++       FT+ S+  A 
Sbjct: 204 DMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSAL 263

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
           A +  L+ G  +H+ +++       FV N ++D+YAK G M ++ ++F     ++ VTWN
Sbjct: 264 AGIGALEQGKWVHAHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWN 323

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
           +M+  + Q G   +A+  F +M +  +   ++++  +L AC+    ++ G     +  + 
Sbjct: 324 SMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKHYFDMIKEY 383

Query: 474 NYDMDVVVANALIDMYAKCGSITDARL-VFDMMNDWNEVSWNAMISGYSMH 523
           N + ++     ++D+  + G +  A + +F M  +     W A+++   MH
Sbjct: 384 NLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMH 434



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 118/266 (44%), Gaps = 16/266 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  ++A+ L++     D      IH   +K     D++  + LL++Y +  ++  AT +F
Sbjct: 151 NGFTFASLLKAVGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVF 210

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D++  +N +S+   I G+        A+ +F+ + R G E   F +++    L  +G  E
Sbjct: 211 DKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALE 270

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF----------- 223
               V A + K      AFVG  ++D ++  G +  ARKVF+ + N              
Sbjct: 271 QGKWVHAHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFA 330

Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                +EA++ F +MR  G   N  +F  +L AC     ++  K       +   E ++ 
Sbjct: 331 QYGLGKEAVSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIE 390

Query: 279 VAVALLDLYTKSGEISNARRIFEEMP 304
             V ++DL  ++G ++ A     +MP
Sbjct: 391 HYVTVVDLLGRAGLLNYALVFIFKMP 416



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 89/183 (48%), Gaps = 4/183 (2%)

Query: 439 QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDA 498
           ++  T   Y + + ACA    L+   ++H     + +  D  + N+LI +Y KCGS+ +A
Sbjct: 46  ELAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEA 105

Query: 499 RLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNG 558
             VFD M + + VSW ++I+GY+ + + AE + +   M +  ++PN  TF  +L A   G
Sbjct: 106 HKVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAV--G 163

Query: 559 GLLEQG-EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWR 617
              + G      ++         +   ++++ +  R G +D A  + + +  +  V  W 
Sbjct: 164 AYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVS-WN 222

Query: 618 ALL 620
           AL+
Sbjct: 223 ALI 225


>gi|449461943|ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Cucumis sativus]
 gi|449517215|ref|XP_004165641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Cucumis sativus]
          Length = 706

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 224/581 (38%), Positives = 349/581 (60%), Gaps = 13/581 (2%)

Query: 237 GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNA 296
           GF     T+  ++ AC+GL +IR  K      +   +E D Y+   +L ++ K G + +A
Sbjct: 127 GFHVGYSTYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRNRVLLMHVKCGMMIDA 186

Query: 297 RRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM 356
            R+F+EMP ++ + W  +I+ Y  +   ++A  LF  MR+ F      TF ++++A A +
Sbjct: 187 CRLFDEMPARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCGPRTFATMIRASAGL 246

Query: 357 EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMI 416
           E +  G Q+HS  ++ GL  D+FVS AL+D+Y+KCG +E++  +F E P +  V WN++I
Sbjct: 247 EIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSII 306

Query: 417 VGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD 476
            GY   G   +A+ ++ +M +  V     T+S ++R C+ LA++    QVH   V+  + 
Sbjct: 307 AGYALHGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFG 366

Query: 477 MDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLM 536
           +DVV   AL+D Y+K G + DAR VFD M+  N +SWNA+I+GY  HG   E + +F+ M
Sbjct: 367 LDVVANTALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKM 426

Query: 537 QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGH 596
            + G  PN++TF+ VLSACS  GL E+G   F+SM  ++ ++P   H+  M+ LLGR G 
Sbjct: 427 LREGMMPNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVKPRAMHFACMIELLGREGL 486

Query: 597 LDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNI 656
           LD+A  LI   PFQP+  +W ALL AC +H N+E+G+ +A+ +   EPE  + +++L NI
Sbjct: 487 LDEAYALIRKAPFQPTANMWAALLRACRVHGNLELGKFAAEKLYGMEPEKLSNYIVLLNI 546

Query: 657 YAMARSWEKAAS-----KEPGL------SWIENQGMVHYFRAGDTSHADMNIIRGMLEWL 705
           Y  +   ++AA      K  GL      SWIE     H F +GD  H  +  + G ++ L
Sbjct: 547 YNSSGKLKEAADVFQTLKRKGLRMLPACSWIEVNNQPHAFLSGDKHHVQIEKVVGKVDEL 606

Query: 706 NMKSRKAGYIP-DLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRI 764
            +   K GY+P + + +L DV E+E E+    HSEKLA+A+ L      +P++I+++ RI
Sbjct: 607 MLNISKLGYVPEEQNFMLPDVDENE-EKIRMYHSEKLAIAYGLLNTLEKTPLQIVQSHRI 665

Query: 765 CVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           C DCH+ IK+I+ I +REI+IRD  RFHHF+DG CSCGD+W
Sbjct: 666 CSDCHSVIKLIAMITKREIVIRDASRFHHFRDGSCSCGDYW 706



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 170/332 (51%), Gaps = 20/332 (6%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +Y   + +CI    ++    +   ++  G   D +  N +L ++VK   + DA +LFDEM
Sbjct: 134 TYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRNRVLLMHVKCGMMIDACRLFDEM 193

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
           P RN +S+ T I GY  S  +VEA  LF  +  E ++  P  F   ++   S G   + P
Sbjct: 194 PARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCGPRTFATMIR--ASAGLEIIFP 251

Query: 178 C--VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF------------ 223
              + +C  K G   + FV  ALID +S CG +E A  VFD + +               
Sbjct: 252 GRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYAL 311

Query: 224 ----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
               EEAL+ + +MR  G K ++FTF+ +++ C  L ++  AK  H   ++  + +D+  
Sbjct: 312 HGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVA 371

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
             AL+D Y+K G++ +AR +F+ M  +++I W+ +IA Y       +A+++F +M +  +
Sbjct: 372 NTALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGM 431

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVR 371
            PN  TF++VL AC+     + G +I   + R
Sbjct: 432 MPNHVTFLAVLSACSISGLFERGWEIFQSMTR 463


>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 226/569 (39%), Positives = 337/569 (59%), Gaps = 11/569 (1%)

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
           +LK C     +   K+ H   L    + DL  +  L+++Y+K G +  AR++F+EMP + 
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
           ++ W+ MI    Q     +A++L  +M++     ++FT  SVL ACA    L     +H+
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189

Query: 368 LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK 427
             ++  +  +VFV+ AL+DVYAKCG M+++V +F   P R+ VTW++M  GYVQ     +
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249

Query: 428 AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALID 487
           A+ +F K  E  +   +   SSV+ ACA LAA+  G QV+ L  K+ +  ++ VA++LID
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLID 309

Query: 488 MYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLT 547
           MYAKCG I ++  VF  +   N V WNAMISG S H  S EV+ +F+ MQQ G  PN++T
Sbjct: 310 MYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVT 369

Query: 548 FVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGI 607
           FV VLSAC + GL+++G+ YF  M   + + P + HY+ MV  L RAG + +A  LI  +
Sbjct: 370 FVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKL 429

Query: 608 PFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA 667
           PF  S  +W +LL +C  H N+E+  ++A+ + D EP +   ++LLSN+YA    W++ A
Sbjct: 430 PFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVA 489

Query: 668 -----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIP 716
                       KE G SWIE +  VH F  G+ +H  +  I   L  +  + +K GY  
Sbjct: 490 KMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKV 549

Query: 717 DLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIIS 776
           +    L  V E  K+  L  HSEKLA    L  +PP++PIRI+KNLRIC DCH+ +K+ S
Sbjct: 550 ETQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLAS 609

Query: 777 KIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           K   R++I+RD +RFHHF++GCCSCGDFW
Sbjct: 610 KFFCRDVIVRDTNRFHHFKNGCCSCGDFW 638



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/357 (30%), Positives = 190/357 (53%), Gaps = 18/357 (5%)

Query: 186 LGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF----------------EEALNF 229
           +G  ++      LI+ +S CG V+FAR+VFD + +                    EAL+ 
Sbjct: 93  MGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDL 152

Query: 230 FSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK 289
             QM+  G   + FT + VL AC     +   +  H  A+K   +++++VA ALLD+Y K
Sbjct: 153 LLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAK 212

Query: 290 SGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSV 349
            G + +A  +FE MP + V+ WS M A Y Q ++   A+ LF +  +  +  +QF   SV
Sbjct: 213 CGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSV 272

Query: 350 LQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNH 409
           + ACA +  +  G Q+++L+ + G  S++FV+++L+D+YAKCG +E S ++F +  KRN 
Sbjct: 273 ICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNV 332

Query: 410 VTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCL 469
           V WN MI G  +     + MI+F KM +  +   +VT+ SVL AC  +  ++ G +   L
Sbjct: 333 VLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDL 392

Query: 470 TVKANY-DMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHG 524
             K ++   +V   + ++D  ++ G I +A  L+  +  + +   W ++++    HG
Sbjct: 393 MTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHG 449



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 206/418 (49%), Gaps = 23/418 (5%)

Query: 32  AALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDL 91
           A+LS+  C      P T   +  +       L+ C +   L      H Q+L  G   DL
Sbjct: 40  ASLSSSSCIVECEKPTTKDFNATHVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDL 99

Query: 92  FATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHRE 151
             +N+L+N+Y K   +  A ++FDEMP R+ +S+ T I   T + +  EA+ L   + RE
Sbjct: 100 LTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQRE 159

Query: 152 GHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFA 211
           G   + F  ++ L    +      C  + A   K   D N FV TAL+D ++ CG ++ A
Sbjct: 160 GTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDA 219

Query: 212 RKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGL 255
             VF+ +                 N+ +E+AL  F +    G K + F  + V+ AC GL
Sbjct: 220 VCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGL 279

Query: 256 DTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMI 315
             +   K  +    K+ +  +++VA +L+D+Y K G I  + ++F ++ K++V+ W+ MI
Sbjct: 280 AAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMI 339

Query: 316 ARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLL 375
           +  ++   S++ + LF +M+Q  ++PN  TFVSVL AC  M  +  G +   L+ +   L
Sbjct: 340 SGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHL 399

Query: 376 S-DVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT-WNTMIV-----GYVQLGEVG 426
           + +VF  + ++D  ++ G++  + +L ++ P     + W +++      G ++L EV 
Sbjct: 400 APNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVA 457


>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
 gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 938

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 252/780 (32%), Positives = 414/780 (53%), Gaps = 29/780 (3%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N ++ A  + SC    D+     +    LK G    + A N L+ ++     + +A  +F
Sbjct: 159 NENNIALVISSCGFLMDIILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIF 218

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           +EM ER+TIS+ + I     ++   E+   F  +     E+N    +  L +  S+ + +
Sbjct: 219 NEMNERDTISWNSIISANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLK 278

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FND---CFE 224
               V     K G +SN  +   L+  +S  G  + A  +F  +       +N    C+ 
Sbjct: 279 WGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYV 338

Query: 225 E------ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
           +      AL  F++M  +  + N  TF   L ACL  +     K  HG  +    + +L 
Sbjct: 339 QDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELI 398

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           +   L+  Y K  +++ A+++F+ MPK D + W+ +I  +A      +AV  F  MR+  
Sbjct: 399 IGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGS 458

Query: 339 VAPNQF-TFVSVLQACATMEGL-DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
            +   + T V++L +C T E L   G  IH+  V  G   D  V ++L+ +YAKCG + +
Sbjct: 459 TSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHS 518

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           S  +F +   +    WN +I    + G   +A+ +  +M    +   +  +S+ L   A 
Sbjct: 519 SSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAAD 578

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           LA LE G Q+H  T+K  +++D  + NA +DMY KCG + DA  +     D + +SWN +
Sbjct: 579 LAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGKCGELDDALRILPQPTDRSRLSWNTL 638

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           IS  + HG   +  + F  M + G +PN+++FV +LSACS+GGL+++G AY+ SM + YG
Sbjct: 639 ISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLSACSHGGLVDEGLAYYASMTSVYG 698

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
           I+P IEH   M+ LLGR+G L +A   I  +P  P+ ++WR+LL +C I+ N+++GR +A
Sbjct: 699 IQPGIEHCVCMIDLLGRSGRLVEAEAFITEMPIPPNDLVWRSLLASCRIYRNLDLGRKAA 758

Query: 637 QHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYF 685
           +H+L+ +P D++ +VL SN++A    WE               K+P  SW++ +G +  F
Sbjct: 759 KHLLELDPSDDSAYVLYSNVFATIGRWEDVEDVRGQMGAHKIQKKPAHSWVKWKGNISIF 818

Query: 686 RAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAF 745
             GD +H  M  I G L  L     +AGY+PD S  L+D  E++KE  +W HSE++ALAF
Sbjct: 819 GMGDQTHPQMEQINGKLLGLMKIVGEAGYVPDTSYSLQDTDEEQKEHNMWSHSERIALAF 878

Query: 746 ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            L  +P  S +RI KNLR+C DCH+  K +S ++ R+I++RD +RFHHF +G CSC D+W
Sbjct: 879 GLINIPEGSTVRIFKNLRVCGDCHSFFKFVSGVLGRKIVLRDPYRFHHFTNGNCSCSDYW 938



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 155/577 (26%), Positives = 267/577 (46%), Gaps = 30/577 (5%)

Query: 73  QTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGY 132
           +     H   +K G   D+F     ++ Y     + +A K+F+EMP+RN +S+ + +  Y
Sbjct: 76  KEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPDRNVVSWTSLMVSY 135

Query: 133 TVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE---LCPCVFACVYKLGHD 189
           + +    E +  +  +  EG   N         V+ S G+     L   +     K G +
Sbjct: 136 SDNGSKKEVINTYKRMRHEGICCNE---NNIALVISSCGFLMDIILGHQLLGHALKFGLE 192

Query: 190 SNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQM 233
           +      +LI  F  CG +  A  +F+ +                 N   EE+  +F  M
Sbjct: 193 TKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWM 252

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
           R V  + N  T + +L  C  +D ++  K  HG A+K   E ++ +   LL +Y+ +G  
Sbjct: 253 RLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRS 312

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
            +A  IF  MP++D+I W+ M+A Y Q    + A+++F  M       N  TF S L AC
Sbjct: 313 KDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAAC 372

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
              E    G  +H  VV +GL  ++ + N L+  Y KC +M  + ++F   PK + VTWN
Sbjct: 373 LDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWN 432

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATE-VTYSSVLRACASLAAL-EPGMQVHCLTV 471
            +I G+    E+ +A+  F  M E      + +T  ++L +C +   L + G+ +H  TV
Sbjct: 433 ALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTV 492

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
              +D+D  V ++LI MYAKCG +  +  +FD +       WNA+I+  + +G   E LK
Sbjct: 493 VTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALK 552

Query: 532 VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY--TSMVS 589
           +   M+  G   +   F   LS  ++  +LE+G+    S +   G E  ++H+   + + 
Sbjct: 553 LVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTI-KLGFE--LDHFIINAAMD 609

Query: 590 LLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH 626
           + G+ G LD A +++   P   S + W  L+     H
Sbjct: 610 MYGKCGELDDALRILPQ-PTDRSRLSWNTLISISARH 645



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 144/548 (26%), Positives = 265/548 (48%), Gaps = 33/548 (6%)

Query: 100 VYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFA 159
           +Y K  R+  A  +FD M ERN  S+   + GY     +VEAV  F  +   G + + F 
Sbjct: 1   MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60

Query: 160 FTAFL------KVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARK 213
             + +       ++   G+            K G   + FVGT+ +  ++  G V  A+K
Sbjct: 61  IASLVTACNKSSIMAKEGFQ-----FHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQK 115

Query: 214 VFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDT 257
           +F+ +                 N   +E +N + +MR  G   N    A V+ +C  L  
Sbjct: 116 MFNEMPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMD 175

Query: 258 IRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIAR 317
           I +     G ALK   E  +  A +L+ ++   G+I+ A  IF EM ++D I W+ +I+ 
Sbjct: 176 IILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISA 235

Query: 318 YAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD 377
            AQ  L  ++   F  MR      N  T   +L  C +++ L  G  +H L V+ GL S+
Sbjct: 236 NAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESN 295

Query: 378 VFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
           + + N L+ VY+  GR +++  +F   P+R+ ++WN+M+  YVQ G    A+ +F++ML 
Sbjct: 296 ICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLW 355

Query: 438 EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITD 497
            +     VT++S L AC        G  +H   V      ++++ N LI  Y KC  + +
Sbjct: 356 MKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAE 415

Query: 498 ARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRP-NNLTFVGVLSAC- 555
           A+ VF  M   ++V+WNA+I G++ +    E +  F LM++      + +T V +L +C 
Sbjct: 416 AKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCL 475

Query: 556 SNGGLLEQG-EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVM 614
           ++  L++ G   +  ++V  + ++  ++  +S++++  + G L  ++ + + + F+ S  
Sbjct: 476 THEDLIKYGIPIHAHTVVTGFDLDQHVQ--SSLITMYAKCGDLHSSSYIFDQLVFKTSS- 532

Query: 615 IWRALLGA 622
           +W A++ A
Sbjct: 533 VWNAIIAA 540



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 122/487 (25%), Positives = 230/487 (47%), Gaps = 22/487 (4%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N  + +  L  C   D L+    +H   +K G   ++   N LL+VY    R  DA  
Sbjct: 258 EINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAEL 317

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +F  MPER+ IS+ + +  Y    + + A+ +F+ +     E+N   FT+ L   +   +
Sbjct: 318 IFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEF 377

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------G 217
                 +   V  LG      +G  LI  +  C  +  A+KVF                G
Sbjct: 378 FTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGG 437

Query: 218 LFNDC-FEEALNFFSQMRAVGFKPNNF-TFAFVLKACLGL-DTIRVAKSAHGCALKTCYE 274
             N+    EA+  F  MR       ++ T   +L +CL   D I+     H   + T ++
Sbjct: 438 FANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFD 497

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
           +D +V  +L+ +Y K G++ ++  IF+++  K    W+ +IA  A+     +A++L  RM
Sbjct: 498 LDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRM 557

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
           R A +  +QF F + L   A +  L+ G Q+H   +++G   D F+ NA MD+Y KCG +
Sbjct: 558 RSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGKCGEL 617

Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
           ++++ +  +   R+ ++WNT+I    + G+  KA   F  ML+  V    V++  +L AC
Sbjct: 618 DDALRILPQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLSAC 677

Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDAR-LVFDMMNDWNEV 511
           +    ++ G+  +  ++ + Y +   + +   +ID+  + G + +A   + +M    N++
Sbjct: 678 SHGGLVDEGLAYYA-SMTSVYGIQPGIEHCVCMIDLLGRSGRLVEAEAFITEMPIPPNDL 736

Query: 512 SWNAMIS 518
            W ++++
Sbjct: 737 VWRSLLA 743


>gi|15239085|ref|NP_201360.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180382|sp|Q9LSL8.1|PP446_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65570
 gi|8978285|dbj|BAA98176.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010689|gb|AED98072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 738

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 241/640 (37%), Positives = 363/640 (56%), Gaps = 32/640 (5%)

Query: 195 GTALIDAFSVCGCVEFARKVFDGL-------FNDCF---------EEALNFFSQMRAVGF 238
           G+ L+DA   CG +++AR+VFDG+       +N            +EA+  +  M     
Sbjct: 102 GSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNV 161

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM-DLYVAVALLDLYTKSGEISNAR 297
            P+ +T + V KA   L   + A+ +HG A+    E+ +++V  AL+D+Y K G+   A+
Sbjct: 162 LPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAK 221

Query: 298 RIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATME 357
            + + + +KDV+  + +I  Y+Q     +AV+ F  M    V PN++T+ SVL +C  ++
Sbjct: 222 LVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLK 281

Query: 358 GLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIV 417
            +  G  IH L+V+ G  S +    +L+ +Y +C  +++S+ +F      N V+W ++I 
Sbjct: 282 DIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLIS 341

Query: 418 GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM 477
           G VQ G    A+I F KM+ + +     T SS LR C++LA  E G Q+H +  K  +D 
Sbjct: 342 GLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDR 401

Query: 478 DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQ 537
           D    + LID+Y KCG    ARLVFD +++ + +S N MI  Y+ +G   E L +F+ M 
Sbjct: 402 DKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMI 461

Query: 538 QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHL 597
             G +PN++T + VL AC+N  L+E+G   F S   +  I    +HY  MV LLGRAG L
Sbjct: 462 NLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRL 520

Query: 598 DKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIY 657
           ++A  L   +   P +++WR LL AC +H  VE+     + IL+ EP DE T +L+SN+Y
Sbjct: 521 EEAEMLTTEV-INPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLY 579

Query: 658 AMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDT-SHADMNIIRGMLEWL 705
           A    W +              K P +SW+E     H F AGD  SH +   I   LE L
Sbjct: 580 ASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEEL 639

Query: 706 NMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRIC 765
             KS+  GY+ D S V +D+ E  KER L  HSEKLA+AFA+++    S IRI+KNLR+C
Sbjct: 640 IKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWRNVGGS-IRILKNLRVC 698

Query: 766 VDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           VDCH+ IKI+S++++REII RD  RFHHF+DG CSCGD+W
Sbjct: 699 VDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 116/489 (23%), Positives = 225/489 (46%), Gaps = 26/489 (5%)

Query: 56  SHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFD 115
           +H+++  L+ CI    +    TI   +LK G   ++  +  L++  +K   +  A ++FD
Sbjct: 65  THNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEISGSK-LVDASLKCGDIDYARQVFD 123

Query: 116 EMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAEL 175
            M ER+ +++ + I       +  EAV ++  +       + +  ++  K    +   + 
Sbjct: 124 GMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKE 183

Query: 176 CPCVFACVYKLGHD-SNAFVGTALIDAFSVCGCVEFARKVFDGL--------------FN 220
                     LG + SN FVG+AL+D +   G    A+ V D +              ++
Sbjct: 184 AQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYS 243

Query: 221 DCFE--EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
              E  EA+  F  M     +PN +T+A VL +C  L  I   K  HG  +K+ +E  L 
Sbjct: 244 QKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALA 303

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
              +LL +Y +   + ++ R+F+ +   + + W+ +I+   Q      A+  F +M +  
Sbjct: 304 SQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDS 363

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           + PN FT  S L+ C+ +   + G QIH +V + G   D +  + L+D+Y KCG  + + 
Sbjct: 364 IKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMAR 423

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            +F    + + ++ NTMI  Y Q G   +A+ +F +M+   +   +VT  SVL AC +  
Sbjct: 424 LVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSR 483

Query: 459 ALEPGMQVHCLTVKANYDMDVVVAN----ALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
            +E G    C    +     +++ N     ++D+  + G + +A ++   + + + V W 
Sbjct: 484 LVEEG----CELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWR 539

Query: 515 AMISGYSMH 523
            ++S   +H
Sbjct: 540 TLLSACKVH 548



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 174/380 (45%), Gaps = 31/380 (8%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           ++F  + L+++YVK  +  +A  + D + E++ +     I GY+   +  EAV  F ++ 
Sbjct: 200 NVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSML 259

Query: 150 REGHELNPFAFTAFL---KVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALI------- 199
            E  + N + + + L     L  +G  +L   +   + K G +S     T+L+       
Sbjct: 260 VEKVQPNEYTYASVLISCGNLKDIGNGKL---IHGLMVKSGFESALASQTSLLTMYLRCS 316

Query: 200 ---DAFSVCGCVEFARKV-----FDGLFNDCFEE-ALNFFSQMRAVGFKPNNFTFAFVLK 250
              D+  V  C+E+  +V       GL  +  EE AL  F +M     KPN+FT +  L+
Sbjct: 317 LVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALR 376

Query: 251 ACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIP 310
            C  L      +  HG   K  ++ D Y    L+DLY K G    AR +F+ + + DVI 
Sbjct: 377 GCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVIS 436

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM----EGLDLGNQIH 366
            + MI  YAQ     +A++LF RM    + PN  T +SVL AC       EG +L +   
Sbjct: 437 LNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFR 496

Query: 367 SLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVG 426
               ++ L +D +    ++D+  + GR+E +  L  E    + V W T++       +V 
Sbjct: 497 K--DKIMLTNDHYA--CMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACKVHRKVE 552

Query: 427 KAMIMFSKMLEEQVPATEVT 446
            A  +  K+LE + P  E T
Sbjct: 553 MAERITRKILEIE-PGDEGT 571



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 129/283 (45%), Gaps = 26/283 (9%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N ++YA+ L SC    D+     IH  ++K G    L +   LL +Y++ + + D+ ++F
Sbjct: 266 NEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVF 325

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             +   N +S+ + I G   + +   A+  F  + R+  + N F  ++ L+   ++   E
Sbjct: 326 KCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFE 385

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
               +   V K G D + + G+ LID +  CGC + AR VFD L                
Sbjct: 386 EGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYA 445

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            N    EAL+ F +M  +G +PN+ T   VL AC   +  R+ +   GC L   +  D  
Sbjct: 446 QNGFGREALDLFERMINLGLQPNDVTVLSVLLAC---NNSRLVE--EGCELFDSFRKDKI 500

Query: 279 VAV-----ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIA 316
           +        ++DL  ++G +  A  +  E+   D++ W  +++
Sbjct: 501 MLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLS 543



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 1/124 (0%)

Query: 442 ATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLV 501
            T   +S +LR C    ++     +    +K+ +  ++   + L+D   KCG I  AR V
Sbjct: 63  TTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEIS-GSKLVDASLKCGDIDYARQV 121

Query: 502 FDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLL 561
           FD M++ + V+WN++I+    H  S E ++++ LM      P+  T   V  A S+  L 
Sbjct: 122 FDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLE 181

Query: 562 EQGE 565
           ++ +
Sbjct: 182 KEAQ 185


>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
 gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
          Length = 795

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 250/748 (33%), Positives = 394/748 (52%), Gaps = 43/748 (5%)

Query: 95  NVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHE 154
           N+++ +Y++      A  +FD M ++N +++ + I  +T +  F +A+ LF  +   G  
Sbjct: 54  NIVIQMYLRCGCTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVS 113

Query: 155 LNPFAFTAFLKVLVSMGWA------ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCV 208
            +   FT+ L     + W+      +    V + + + G++ +  V   +++ +  CG V
Sbjct: 114 PDRITFTSIL-----LKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDV 168

Query: 209 EFARKVFDGLFN-DCFE---------------EALNFFSQMRAVGFKPNNFTFAFVLKAC 252
           E A  VFD + + + F                E L   S+M   G KP+ +TF  VL AC
Sbjct: 169 EQAGNVFDSIQDPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGAC 228

Query: 253 LGLDTIRVAKSAHGCALK-TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPW 311
             +  +  AK  H   +  T  + D  V  AL++LY K G +  A  +F ++  KD++ W
Sbjct: 229 TAVGALEEAKILHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSW 288

Query: 312 SFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR 371
           S MIA +AQ+  +  A++L   M    V PN  TFV+VL+A  +++    G +IH+ +V+
Sbjct: 289 SSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQ 348

Query: 372 VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIM 431
            G   DV +++AL+ +Y   G +E +  +F  S +R+ V+W++MI GY Q     +A+ +
Sbjct: 349 AGYSDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSL 408

Query: 432 FSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAK 491
           F +M  + V    VT+ S + ACA + AL  G Q+H        D DV VA AL+++Y K
Sbjct: 409 FREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGK 468

Query: 492 CGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGV 551
           CG + +A  VF  M   N ++W ++   Y  +G  +  LK+   M+ +G +P+ + FV +
Sbjct: 469 CGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAI 528

Query: 552 LSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQP 611
           L +C+  G + +G  Y+  M  ++GI P +EH   MV +LGRAG L+ A +LI  + F+ 
Sbjct: 529 LVSCNYAGQMSKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFES 588

Query: 612 SVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAASKEP 671
           S + W  LL AC  HN+      +A+ I   EP++   +VLLS+++  A SWE A     
Sbjct: 589 S-LAWMMLLTACKAHNDTARAARAAEKIFQLEPKNATPYVLLSSVFCAAGSWEAAEETRR 647

Query: 672 -----------GLSWIENQGMVHYFRAGDT--SHADMNIIRGMLEWLNMKSRKAGYIPDL 718
                      G S IE    VH F A      H  +  I   LE L  + + AGY+PD 
Sbjct: 648 RMDGRGVQRLLGRSSIEIGDRVHEFVAASDVLPHHLVGEIFAALEKLGREMQGAGYVPDA 707

Query: 719 SAV-LRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISK 777
           +AV LRDV E  KE  +  HSE LAL   +   P  +P+RI KNLR+C DCH A K +SK
Sbjct: 708 TAVRLRDVEEGGKENAVPYHSEMLALGLGIISTPAGTPLRITKNLRMCSDCHIATKFVSK 767

Query: 778 IVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +V R I +RD  R HHF++G CSCGD+W
Sbjct: 768 LVHRRISVRDGRRHHHFENGVCSCGDYW 795



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/283 (21%), Positives = 118/283 (41%), Gaps = 27/283 (9%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N+ ++   L++       Q    IH ++++ G   D+  T+ L+ +Y     +  A  +F
Sbjct: 319 NNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIF 378

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           +   ER+ +S+ + I GY+ +     A+ LF  +  +G + N   F + +     +G   
Sbjct: 379 ESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGVGALR 438

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
               +   V  LG D +  V TAL++ +  CG +E A  VF G+                
Sbjct: 439 RGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYG 498

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            N     +L     M   G KP+   F  +L +C      +++K  H   L T    D  
Sbjct: 499 QNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAG--QMSKGLHYYNLMT---QDFG 553

Query: 279 VAVA------LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMI 315
           +A A      ++D+  ++G++  A ++   M  +  + W  ++
Sbjct: 554 IAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFESSLAWMMLL 596



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 93/194 (47%), Gaps = 8/194 (4%)

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD-----VVVANALIDMY 489
           M   ++ A     +++L AC+ L AL  G +VH L ++ +   D      ++ N +I MY
Sbjct: 1   MEAREIQAEISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMY 60

Query: 490 AKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFV 549
            +CG    A  VFD M D N V+W ++IS ++  G   + + +F  M   G  P+ +TF 
Sbjct: 61  LRCGCTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFT 120

Query: 550 GVLSACSNGGL-LEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIP 608
            +L   S     L++G+    S +   G E        +V + G+ G +++A  + + I 
Sbjct: 121 SILLKWSGRERNLDEGK-RVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQ 179

Query: 609 FQPSVMIWRALLGA 622
             P+V  W  ++ A
Sbjct: 180 -DPNVFSWTIIIAA 192


>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Vitis vinifera]
          Length = 877

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 237/698 (33%), Positives = 378/698 (54%), Gaps = 27/698 (3%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
           F+  ++A  L+SC   +D    + IH   +K G   D+   + LL++Y K  +L  + + 
Sbjct: 172 FDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQF 231

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           F  MPE+N +S+   I G   +      + LF  + + G  ++   F +  +    +   
Sbjct: 232 FHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSAL 291

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFE--------- 224
            L   +     K    ++  +GTA +D +  C  +  A+K+F+ L N   +         
Sbjct: 292 RLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGY 351

Query: 225 -------EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
                  EAL  F  ++  G   +  + +   +AC  +         HG ++K+  + ++
Sbjct: 352 ARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNI 411

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
            VA A+LD+Y K G +  A  +FEEM  +D + W+ +IA + Q       + LF  M Q+
Sbjct: 412 CVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQS 471

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            + P++FT+ SVL+ACA  + L+ G +IH+ +++  L  D FV  AL+D+Y+KCG ME +
Sbjct: 472 GMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKA 531

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
            +L     ++  V+WN +I G+    +  +A   FSKMLE  V     TY+++L  CA+L
Sbjct: 532 EKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANL 591

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
             +E G Q+H   +K     D  +++ L+DMY+KCG++ D +L+F+   + + V+WNAM+
Sbjct: 592 VTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMV 651

Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
            GY+ HGL  E LK+F+ MQ    +PN+ TF+ VL AC + GL+E+G  YF SM++NYG+
Sbjct: 652 CGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGL 711

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQ 637
           +P +EHY+ +V ++GR+G + KA +LIEG+PF+   +IWR LL  C IH NVE+   +A 
Sbjct: 712 DPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAY 771

Query: 638 HILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFR 686
            IL  EPED A +VLLSNIYA A  W +              KEPG SWIE +  VH F 
Sbjct: 772 SILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFL 831

Query: 687 AGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRD 724
            GD +H     I   L+ L  + +  GY+PD   +L D
Sbjct: 832 VGDKAHPRSKEIYENLDVLTDEMKWVGYMPDTDFILND 869



 Score =  271 bits (694), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 169/590 (28%), Positives = 297/590 (50%), Gaps = 28/590 (4%)

Query: 51  VSEFNSHSYATS--LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLP 108
           ++EF    + T+  +Q  I+  DL+ A  +   + ++    D  + N +L  Y     + 
Sbjct: 70  LTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQR----DTVSWNAMLFGYAGRGDIG 125

Query: 109 DATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLV 168
            A KLFD MPER+ +S+ + I GY  +    + + +F  + R G   +   F   LK   
Sbjct: 126 VAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCS 185

Query: 169 SMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------- 218
           S+        +     K+G D +   G+AL+D ++ C  ++ + + F  +          
Sbjct: 186 SLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSA 245

Query: 219 ------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC 272
                  ND     L  F +M+  G   +  TFA V ++C GL  +R+    HG ALKT 
Sbjct: 246 IIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTD 305

Query: 273 YEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFC 332
           +  D+ +  A LD+Y K   +S+A+++F  +P  ++  ++ +I  YA++D  I+A+ +F 
Sbjct: 306 FGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFR 365

Query: 333 RMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCG 392
            ++++ +  ++ +     +ACA ++G   G Q+H L ++    S++ V+NA++D+Y KCG
Sbjct: 366 LLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCG 425

Query: 393 RMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLR 452
            +  +  +F E   R+ V+WN +I  + Q G   K + +F  ML+  +   E TY SVL+
Sbjct: 426 ALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLK 485

Query: 453 ACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS 512
           ACA   AL  GM++H   +K+   +D  V  ALIDMY+KCG +  A  + D + +   VS
Sbjct: 486 ACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVS 545

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
           WNA+ISG+S+   S E  K F  M + G  P+N T+  +L  C+N   +E G+     ++
Sbjct: 546 WNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQII 605

Query: 573 ANYGIEPCIEHYTS--MVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
                E   + Y S  +V +  + G++     + E  P +  V  W A++
Sbjct: 606 KK---ELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFV-TWNAMV 651



 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 141/466 (30%), Positives = 246/466 (52%), Gaps = 8/466 (1%)

Query: 186 LGHDSNAFVGTA--LIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNF 243
            G+     +G A  L DA      V +   +   L N    + ++ F QM  +G   +  
Sbjct: 116 FGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRT 175

Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
           TFA VLK+C  L+        HG A+K  ++ D+    ALLD+Y K  ++  + + F  M
Sbjct: 176 TFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSM 235

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
           P+K+ + WS +IA   Q D     +ELF  M++A V  +Q TF SV ++CA +  L LG+
Sbjct: 236 PEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGS 295

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
           Q+H   ++    +DV +  A +D+Y KC  + ++ +LF   P  N  ++N +IVGY +  
Sbjct: 296 QLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSD 355

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN 483
           +  +A+ MF  + +  +   EV+ S   RACA +     G+QVH L++K+    ++ VAN
Sbjct: 356 KGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVAN 415

Query: 484 ALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRP 543
           A++DMY KCG++ +A LVF+ M   + VSWNA+I+ +  +G   + L +F  M Q G  P
Sbjct: 416 AILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEP 475

Query: 544 NNLTFVGVLSACSNGGLLEQG-EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           +  T+  VL AC+    L  G E + + + +  G++  +    +++ +  + G ++KA K
Sbjct: 476 DEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVG--IALIDMYSKCGMMEKAEK 533

Query: 603 LIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDF--EPED 646
           L + +  Q +V+ W A++    +    E  + +   +L+   +P++
Sbjct: 534 LHDRLAEQ-TVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDN 578



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 229/441 (51%), Gaps = 13/441 (2%)

Query: 196 TALIDAFSVCGCVEFARKVFDGLFNDCFEE-----ALNFFSQMRAVGFKPNNFTFAFVLK 250
           T  I  FS        +K F  +F +C +           ++M    FKP  F    +++
Sbjct: 26  TLPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQ 85

Query: 251 ACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIP 310
             +    +  A            + D     A+L  Y   G+I  A+++F+ MP++DV+ 
Sbjct: 86  MYIKCSDLEFAFKV----FDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVS 141

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV 370
           W+ +I+ Y         +++F +M +     ++ TF  VL++C+++E    G QIH L V
Sbjct: 142 WNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAV 201

Query: 371 RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMI 430
           ++G   DV   +AL+D+YAKC +++ S++ F   P++N V+W+ +I G VQ  ++   + 
Sbjct: 202 KMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLE 261

Query: 431 MFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYA 490
           +F +M +  V  ++ T++SV R+CA L+AL  G Q+H   +K ++  DVV+  A +DMY 
Sbjct: 262 LFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYM 321

Query: 491 KCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVG 550
           KC +++DA+ +F+ + + N  S+NA+I GY+      E L +F L+Q+ G   + ++  G
Sbjct: 322 KCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSG 381

Query: 551 VLSACSN-GGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF 609
              AC+   G LE  + +  SM +      C+ +  +++ + G+ G L +A  + E +  
Sbjct: 382 AFRACAVIKGDLEGLQVHGLSMKSLCQSNICVAN--AILDMYGKCGALVEACLVFEEMVS 439

Query: 610 QPSVMIWRALLGACIIHNNVE 630
           + +V  W A++ A   + N E
Sbjct: 440 RDAVS-WNAIIAAHEQNGNEE 459



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 136/286 (47%), Gaps = 26/286 (9%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E +  +Y + L++C     L   M IH +++K    LD F    L+++Y K   +  A K
Sbjct: 474 EPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEK 533

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           L D + E+  +S+   I G+++  Q  EA   FS +   G + + F +   L    ++  
Sbjct: 534 LHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVT 593

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF--------- 223
            EL   + A + K    S+A++ + L+D +S CG ++  + +F+   N  F         
Sbjct: 594 VELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCG 653

Query: 224 -------EEALNFFSQMRAVGFKPNNFTFAFVLKAC--LGLDTIRVAKSAHGC-ALKTCY 273
                  EEAL  F  M+    KPN+ TF  VL+AC  +GL    V K  H   ++ + Y
Sbjct: 654 YAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGL----VEKGLHYFHSMLSNY 709

Query: 274 EMD--LYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
            +D  L     ++D+  +SG++S A  + E MP + D + W  +++
Sbjct: 710 GLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLS 755


>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
          Length = 702

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 259/700 (37%), Positives = 383/700 (54%), Gaps = 48/700 (6%)

Query: 152 GHELNPFAFTAFLKVLVSMGWAELC------PCVFACVYKLGHDSNAFVGTALIDAFSVC 205
           GH L  F   + L+ +  +  A            FA    L H    F   AL+  ++  
Sbjct: 5   GHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARL 64

Query: 206 GCVEFARKVFDG------------------LFNDCFEEALNFFSQMRAVGFKPNNFTFAF 247
           G V  A+++F G                  + +  F+EA+     M A+G +P+  TFA 
Sbjct: 65  GLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFAS 124

Query: 248 VLKACLGLDTIRVAKSAHGCALKTC-YEMDLYVAVALLDLYTKSGEISNARRIFEEMPK- 305
            L AC  L+ + V +  H   +K      + +VA AL+D+Y    ++  AR++F+ +P  
Sbjct: 125 ALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDS 184

Query: 306 -KDVIPWSFMIARYAQTDLSIDAVELFCRMR-QAFVAPNQFTFVSVLQACATMEGLDLGN 363
            K +  W+ MI  YAQ  +  +A+ LF RM  +A   P + T  SVL ACA  E      
Sbjct: 185 GKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKE 244

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
            +H  VV+ G+  + FV NALMD+YA+ G+ + +  +FA     + V+WNT+I G V  G
Sbjct: 245 AVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQG 304

Query: 424 EVGKAMIMFSKM--LEEQ-VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV 480
            V  A  +  +M  LEE  V    +T  ++L  CA LAA   G ++H   V+   D DV 
Sbjct: 305 HVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVA 364

Query: 481 VANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG 540
           V +AL+DMYAKCG +  +R VFD +   N ++WN +I  Y MHGL  E   +FD M   G
Sbjct: 365 VGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASG 424

Query: 541 -WRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDK 599
             RPN +TF+  L+ACS+ G++++G   F +M  ++G+EP  +    +V +LGRAG LD+
Sbjct: 425 EARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDE 484

Query: 600 AAKLIEGIPF-QPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYA 658
           A  ++  +   +  V  W  +LGAC +H NV +G ++ + +L+ EPE+ + +VLL NIY+
Sbjct: 485 AYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYS 544

Query: 659 MARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLE--WL 705
            A  W +AA           +KEPG SWIE  G +H F AG+++H     +   +E  W 
Sbjct: 545 AAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWG 604

Query: 706 NMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRIC 765
            M +R  GY PD S VL D+ + +K   L  HSEKLA+AF L +  P + IR+ KNLR+C
Sbjct: 605 EMVAR--GYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVC 662

Query: 766 VDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            DCH A K +SK+V REI++RDV RFHHF++G CSCGD+W
Sbjct: 663 NDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 702



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 65/288 (22%), Positives = 113/288 (39%), Gaps = 35/288 (12%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           + A+ L +C +++       +H  V+K+G   + F  N L+++Y +L +   A ++F  +
Sbjct: 226 TMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMV 285

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGL---FSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
              + +S+ T I G  V     +A  L      L   G   N       L     +    
Sbjct: 286 DLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPA 345

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------- 218
               +     +   D++  VG+AL+D ++ CGC+  +R VFD L                
Sbjct: 346 RGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYG 405

Query: 219 FNDCFEEALNFFSQMRAVG-FKPNNFTFAFVLKAC-------LGLDTIRVAKSAHGCALK 270
            +    EA   F +M A G  +PN  TF   L AC        GL      +  HG    
Sbjct: 406 MHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGV--- 462

Query: 271 TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP--KKDVIPWSFMIA 316
              E    +   ++D+  ++G +  A  +   M   ++ V  WS M+ 
Sbjct: 463 ---EPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLG 507



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 115/262 (43%), Gaps = 22/262 (8%)

Query: 435 MLEEQVPATEVTYSSVLRACASL----AALEPGMQVHCLTVKAN--YDMDVVVANALIDM 488
           ML    P T  T  SVLRA + L    AA+  G + H   +K    +       NAL+ M
Sbjct: 1   MLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSM 60

Query: 489 YAKCGSITDARLVF--DMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNL 546
           YA+ G + DA+ +F        + V+WN M+S     G+  E ++    M   G RP+ +
Sbjct: 61  YARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGV 120

Query: 547 TFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEG 606
           TF   L ACS   LL+ G      ++ +  +       +++V +      + KA ++ + 
Sbjct: 121 TFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDM 180

Query: 607 IPFQPSVM-IWRALL-GACIIHNNVEIGRLSAQHILDFEPEDEATHV-----LLSNIYAM 659
           +P     + +W A++ G      + E  RL A+       E EA  V     + S + A 
Sbjct: 181 VPDSGKQLGMWNAMICGYAQAGMDEEALRLFARM------EAEAGFVPCETTMASVLPAC 234

Query: 660 ARSWEKAASKEPGLSWIENQGM 681
           ARS E  A KE    ++  +GM
Sbjct: 235 ARS-EAFAGKEAVHGYVVKRGM 255


>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 944

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 251/752 (33%), Positives = 400/752 (53%), Gaps = 34/752 (4%)

Query: 62  SLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERN 121
           +++  ++   +  A+ ++ ++  K    +  +TN +++ YVK+  L  A  LFD MP+R 
Sbjct: 50  TVEDLLRRGQVSAALKVYDEMPHK----NTVSTNTMISGYVKMGDLSSARHLFDAMPDRT 105

Query: 122 TISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFA 181
            +++   +  Y  ++ F EA  LF  + R     +   FT  L              V A
Sbjct: 106 VVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHA 165

Query: 182 CVYKLGHDSNAFVGTALIDAFSVC-------GCVEFARKV------FDGLF-----NDCF 223
              KLG D+N F+    +   S C        CV F   +      F+ L      +  +
Sbjct: 166 FAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLY 225

Query: 224 EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
            EA++ F +MR  G KP++FTF+ VLKA +GL    + +  HG ++ T +  D  V   +
Sbjct: 226 TEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQI 285

Query: 284 LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
           L  Y+K   +   R +F EMP+ D + ++ +I+ Y+Q +   +++ LF  M+        
Sbjct: 286 LHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRN 345

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
           F F ++L   A +  L +G Q+H   +     S + V N+L+D+YAKC   + +  +F  
Sbjct: 346 FPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKS 405

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
             +R+ V+W  +I GYVQ G  G  + +F+KM    + A + T+++VL+A A  A+L  G
Sbjct: 406 LSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLG 465

Query: 464 MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMH 523
            Q+H   +++    +V   + L+DMYAKCGSI DA  VF+ M D N VSWNA+IS Y+ +
Sbjct: 466 KQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADN 525

Query: 524 GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEH 583
           G     +  F  M Q G +P++++ +GVL ACS+ G +EQG  +F++M   YGI P  +H
Sbjct: 526 GDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKH 585

Query: 584 YTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFE 643
           Y  M+ LLGR G   +A KL++ +PF+P  ++W ++L AC I+ N  +   +A+ +   E
Sbjct: 586 YACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQLFSME 645

Query: 644 P-EDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTS 691
              D A +V +SNIYA A  W           E+   K P  SW+E    +H F + D +
Sbjct: 646 KLRDAAAYVSMSNIYAAAGKWENVRHVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQT 705

Query: 692 HADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMP 751
           H + + I   +  L  +  + GY PD S+V++D+ E  K   L  HSE+LA+AFAL   P
Sbjct: 706 HPNGDEIVKKINELTTEIEREGYKPDTSSVVQDIDEQMKIESLKYHSERLAVAFALISTP 765

Query: 752 PSSPIRIIKNLRICVDCHTAIKIISKIVQREI 783
              PI ++KNLR C DCH AIK+ISKIV+R I
Sbjct: 766 EGCPIVVMKNLRACRDCHAAIKLISKIVKRVI 797



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 86/377 (22%), Positives = 172/377 (45%), Gaps = 18/377 (4%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +++  L++ +   D      +H   +  G   D    N +L+ Y K +R+ +   LF+EM
Sbjct: 246 TFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEM 305

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
           PE + +S+   I  Y+ + Q+ E++ LF  +   G +   F F   L +  ++   ++  
Sbjct: 306 PELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGR 365

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------ND 221
            V         DS   VG +L+D ++ C   + A  +F  L                   
Sbjct: 366 QVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKG 425

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
                L  F++MR    + +  TFA VLKA  G  ++ + K  H   +++    +++   
Sbjct: 426 LHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGS 485

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
            L+D+Y K G I +A ++FEEMP ++ + W+ +I+ YA       A+  F +M Q+ + P
Sbjct: 486 GLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQP 545

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRV-GLLSDVFVSNALMDVYAKCGRMENSVEL 400
           +  + + VL AC+    ++ G +    +  + G+         ++D+  + GR   + +L
Sbjct: 546 DSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKL 605

Query: 401 FAESP-KRNHVTWNTMI 416
             E P + + + W++++
Sbjct: 606 MDEMPFEPDEIMWSSVL 622



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 107/224 (47%), Gaps = 33/224 (14%)

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
           ++ + +++ G  +D   SN  ++   + G++  +++++ E P +N V+ NTMI GYV++G
Sbjct: 30  RVDARIIKTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISGYVKMG 89

Query: 424 EVGKAMIMFSKMLEEQVPA-------------------------------TEVTYSSVLR 452
           ++  A  +F  M +  V                                   VT++++L 
Sbjct: 90  DLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLLP 149

Query: 453 ACASLAALEPGMQVHCLTVKANYDMD--VVVANALIDMYAKCGSITDARLVFDMMNDWNE 510
            C          QVH   VK  +D +  + V N L+  Y +   +  A ++F+ + D + 
Sbjct: 150 GCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKDS 209

Query: 511 VSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSA 554
           V++N +I+GY   GL  E + +F  M+Q G +P++ TF GVL A
Sbjct: 210 VTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKA 253



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/259 (20%), Positives = 108/259 (41%), Gaps = 27/259 (10%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +  ++AT L++      L     +H  +++ GN  ++F+ + L+++Y K   + DA ++F
Sbjct: 445 DQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVF 504

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           +EMP+RN +S+   I  Y  +     A+G F+ + + G + +  +    L      G+ E
Sbjct: 505 EEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVE 564

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF-----NDCFEEALNF 229
                               GT    A S    +   +K +  +      N  F EA   
Sbjct: 565 Q-------------------GTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKL 605

Query: 230 FSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK 289
             +M    F+P+   ++ VL AC       +A+ A           D    V++ ++Y  
Sbjct: 606 MDEMP---FEPDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEKLRDAAAYVSMSNIYAA 662

Query: 290 SGEISNARRIFEEMPKKDV 308
           +G+  N R + + M ++ +
Sbjct: 663 AGKWENVRHVKKAMRERGI 681


>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 241/778 (30%), Positives = 414/778 (53%), Gaps = 31/778 (3%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE- 116
           ++ + L++C    + +    IH   +K G    +F  N L+ +Y K   L  A  LFD  
Sbjct: 147 TFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGI 206

Query: 117 -MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAEL 175
            M + +T+S+ + I  +      +EA+ LF  +   G   N + F A L+ +    + +L
Sbjct: 207 MMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKL 266

Query: 176 CPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF---------------- 219
              +   V K  H ++ +V  ALI  ++ CG +E A +VF+ +                 
Sbjct: 267 GMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQ 326

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           N+ + +ALN+F  M+  G KP+  +   ++ A      +   K  H  A++   + ++ +
Sbjct: 327 NELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQI 386

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
              L+D+Y K   +      FE M +KD+I W+ +IA YAQ +  ++A+ LF +++   +
Sbjct: 387 GNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGM 446

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
             +     SVL+AC+ ++  +   +IH  V +  L +D+ + NA+++VY + G ++ +  
Sbjct: 447 DVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNVYGEVGHIDYARR 505

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
            F     ++ V+W +MI   V  G   +A+ +F  + +  +    +   S L A A+L++
Sbjct: 506 AFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSS 565

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
           L+ G ++H   ++  + ++  +A++L+DMYA CG++ ++R +F  +   + + W +MI+ 
Sbjct: 566 LKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINA 625

Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
             MHG   + + +F  M  +   P+++TF+ +L ACS+ GL+ +G+ +F+ M   Y +EP
Sbjct: 626 NGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEP 685

Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHI 639
             EHY  MV LL R+  L++A   +  +P +PS  IW ALLGAC IH+N E+G L+A+ +
Sbjct: 686 WPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGACHIHSNKELGELAAKEL 745

Query: 640 LDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAG 688
           L  + E+   + L+SNI+A    W                K PG SWIE    +H F A 
Sbjct: 746 LQSDTENSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMAR 805

Query: 689 DTSHADM-NIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFAL 747
           D SH    +I   + ++  +  +K GYI     V  +V E+EK + L+ HSE+LAL + L
Sbjct: 806 DKSHPQTDDIYLKLAQFTKLLEKKGGYIAQTKFVFHNVSEEEKTQMLYGHSERLALGYGL 865

Query: 748 FKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
              P  + IRI KNLRIC DCHT  KI S++ QR +++RD +RFHHF+ G CSCGDFW
Sbjct: 866 LVTPKGTCIRITKNLRICDDCHTFFKIASEVSQRPLVVRDANRFHHFERGLCSCGDFW 923



 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 164/624 (26%), Positives = 305/624 (48%), Gaps = 37/624 (5%)

Query: 34  LSTQQCSNSTTTPITFSVSEFNSHSYATS----------LQSCIQNDDLQTAMTIHCQVL 83
           +S    +  T  P   S++  ++H  AT           L  C+    L     +H  +L
Sbjct: 14  ISVNTLNKGTLKPAFQSLTLLSTHPLATPSRLEHAHSLLLDLCVAAKALPQGQQLHALLL 73

Query: 84  KKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVG 143
           K    L  F    L+ +Y K   L DA K+FDEM ER   S+   +  +  S +++EA+ 
Sbjct: 74  KSH--LSAFLATKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVSSGKYLEAIE 131

Query: 144 LFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFS 203
           L+  +   G  ++   F + LK   ++G + L   +     K G+    FV  ALI  + 
Sbjct: 132 LYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYG 191

Query: 204 VCGCVEFARKVFDGLF-------------------NDCFEEALNFFSQMRAVGFKPNNFT 244
            CG +  AR +FDG+                     +C  EAL+ F +M+ VG   N +T
Sbjct: 192 KCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCL-EALSLFRRMQEVGVASNTYT 250

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
           F   L+       +++    HG  LK+ +  D+YVA AL+ +Y K G + +A R+FE M 
Sbjct: 251 FVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESML 310

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
            +D + W+ +++   Q +L  DA+  F  M+ +   P+Q + ++++ A      L  G +
Sbjct: 311 CRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKE 370

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
           +H+  +R GL S++ + N L+D+YAKC  ++     F    +++ ++W T+I GY Q   
Sbjct: 371 VHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEF 430

Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA 484
             +A+ +F K+  + +    +   SVLRAC+ L +     ++H    K +   D+++ NA
Sbjct: 431 HLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL-ADIMLQNA 489

Query: 485 LIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPN 544
           ++++Y + G I  AR  F+ +   + VSW +MI+    +GL  E L++F  ++Q   +P+
Sbjct: 490 IVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPD 549

Query: 545 NLTFVGVLSACSNGGLLEQGEAYFKSMV-ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKL 603
           ++  +  LSA +N   L++G+     ++   + +E  I   +S+V +    G ++ + K+
Sbjct: 550 SIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIA--SSLVDMYACCGTVENSRKM 607

Query: 604 IEGIPFQPSVMIWRALLGACIIHN 627
              +  Q  +++W +++ A  +H 
Sbjct: 608 FHSVK-QRDLILWTSMINANGMHG 630



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/488 (25%), Positives = 235/488 (48%), Gaps = 21/488 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N++++  +LQ       ++  M IH  VLK  +  D++  N L+ +Y K  R+ DA ++F
Sbjct: 247 NTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVF 306

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           + M  R+ +S+ T + G   +  + +A+  F  +   G + +  +    +      G   
Sbjct: 307 ESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLL 366

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
               V A   + G DSN  +G  L+D ++ C CV++    F+ +                
Sbjct: 367 KGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYA 426

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            N+   EA+N F +++  G   +      VL+AC GL +    +  HG   K     D+ 
Sbjct: 427 QNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLA-DIM 485

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           +  A++++Y + G I  ARR FE +  KD++ W+ MI       L ++A+ELF  ++Q  
Sbjct: 486 LQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTN 545

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           + P+    +S L A A +  L  G +IH  ++R G   +  ++++L+D+YA CG +ENS 
Sbjct: 546 IQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSR 605

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
           ++F    +R+ + W +MI      G   KA+ +F KM ++ V    +T+ ++L AC+   
Sbjct: 606 KMFHSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSG 665

Query: 459 ALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNA 515
            +  G +   + +K  Y ++    +   ++D+ ++  S+ +A   V +M    +   W A
Sbjct: 666 LMVEGKRFFEI-MKYGYQLEPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWCA 724

Query: 516 MISGYSMH 523
           ++    +H
Sbjct: 725 LLGACHIH 732



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 4/186 (2%)

Query: 444 EVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFD 503
           E  +S +L  C +  AL  G Q+H L +K++  +   +A  L+ MY KCGS+ DA  VFD
Sbjct: 46  EHAHSLLLDLCVAAKALPQGQQLHALLLKSH--LSAFLATKLVLMYGKCGSLRDAVKVFD 103

Query: 504 MMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQ 563
            M++    SWNA++  +   G   E ++++  M+  G   +  TF  VL AC   G    
Sbjct: 104 EMSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRL 163

Query: 564 GEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMI-WRALLGA 622
           G A    +    G    +    +++++ G+ G L  A  L +GI  +    + W +++ A
Sbjct: 164 G-AEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISA 222

Query: 623 CIIHNN 628
            +   N
Sbjct: 223 HVAEGN 228


>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
 gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
          Length = 1108

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 252/766 (32%), Positives = 388/766 (50%), Gaps = 38/766 (4%)

Query: 71   DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPER-NTISFVTTI 129
            D   A   H ++ + G   D+   N ++++Y K      A  +F  +  + + IS+ T +
Sbjct: 350  DFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTML 409

Query: 130  QGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHD 189
                    F + V  F  +   G + N  +F A L    +    +    + + +     D
Sbjct: 410  GASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRD 469

Query: 190  -SNAFVGTALIDAFSVCGCVEFARKVFD----------------GLF--NDCFEEALNFF 230
               + V T L+  +  CG +  A  VF                 G +  ND  +EA    
Sbjct: 470  YVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGAL 529

Query: 231  SQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKS 290
             +M   G  P+  +F  VL +C      +V +    C L++ Y     +  AL+ ++ + 
Sbjct: 530  MEMLQGGVLPDALSFTSVLSSCYCSQEAQVLRM---CILESGYR-SACLETALISMHGRC 585

Query: 291  GEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVL 350
             E+  AR +F+EM   DV+ W+ M++  A+     +   LF RM+   V P++FT  + L
Sbjct: 586  RELEQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTL 645

Query: 351  QACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHV 410
              C     L LG  IH+ V  +GL +D+ V NAL+++Y+ CG    ++  F     R+ V
Sbjct: 646  DTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLV 705

Query: 411  TWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLT 470
            +WN M   Y Q G   +A+++F  M  E V   ++T+S+ L      A +  G   H L 
Sbjct: 706  SWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLA 765

Query: 471  VKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVL 530
             ++  D DV VA  L+ +YAKCG + +A  +F     W  V  NA+I   + HG S E +
Sbjct: 766  AESGLDSDVSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAV 825

Query: 531  KVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSL 590
            K+F  MQQ G RP+  T V ++SAC + G++E+G + F +M   +GI P +EHY   V L
Sbjct: 826  KMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDL 885

Query: 591  LGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATH 650
            LGRAG L+ A ++I  +PF+ + ++W +LLG C +  + E+G   AQ IL+ +P + A H
Sbjct: 886  LGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAH 945

Query: 651  VLLSNIYAMARSWEKA-----------ASKEPGLSWIENQGMVHYFRAGDTSHADMNIIR 699
            V+LSNIY     W+ A               PG+SW+E    VH F AGD SH   + I 
Sbjct: 946  VVLSNIYCATGKWKDADVDRKKLLDQNVKNAPGMSWLEIGKQVHEFVAGDRSHPQTDEIY 1005

Query: 700  GMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRII 759
             +L+ L +  R+AGY  D      D  ++ KE+ L  HSE++A+AF L   PP + ++I+
Sbjct: 1006 VVLDKLELLMRRAGYEADKGL---DAEDELKEKALGYHSERIAIAFGLIATPPDTTLKIV 1062

Query: 760  KNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            KNLR+C DCHTA K IS I+ REII+RD  RFHHF +G CSC D W
Sbjct: 1063 KNLRVCGDCHTATKYISMIMGREIIVRDSLRFHHFSNGTCSCKDCW 1108



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 170/598 (28%), Positives = 272/598 (45%), Gaps = 43/598 (7%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
             Y   LQSC+ ++DL      H  +   G    LF  N L+N+YV+   L +A  +F +
Sbjct: 26  QEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSK 85

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHEL-NPFAFTAFLKVLVSMGWAEL 175
           M ERN +S+   I     S  F  A  LF T+  E     N +   A L    +     +
Sbjct: 86  MEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAI 145

Query: 176 CPCVFACVYKLGHDSNA----FVGTALIDAFSVCGCVEFARKVF--------------DG 217
              + A +++LG +  +     VG A+I+ ++ CG  E A  VF               G
Sbjct: 146 GRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAG 205

Query: 218 LF---NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
            +      + +AL  F +M      PN  TF   L AC  L   R     H    +    
Sbjct: 206 AYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSL---RDGTWLHSLLHEAGLG 262

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKK---DVIPWSFMIARYAQTDLSIDAVELF 331
            D     AL+++Y K G+   A  +F+ M  +   D++ W+ MI+   +     DA+ +F
Sbjct: 263 FDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIF 322

Query: 332 CRMRQAFVAPNQFTFVSVLQACATMEGLDLG--NQIHSLVVRVGLLSDVFVSNALMDVYA 389
            R+R   + PN  T +++L A A   G+D G   + H  +   G L DV V NA++ +YA
Sbjct: 323 RRLRLEGMRPNSVTLITILNALAA-SGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYA 381

Query: 390 KCGRMENSVELFAESP-KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYS 448
           KCG    +  +F     K + ++WNTM+         GK +  F  ML   +   +V++ 
Sbjct: 382 KCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFI 441

Query: 449 SVLRACASLAALEPGMQVHCLTVKANYD-MDVVVANALIDMYAKCGSITDARLVFDMM-- 505
           ++L AC++  AL+ G ++H L +    D ++  VA  L+ MY KCGSI +A LVF  M  
Sbjct: 442 AILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPL 501

Query: 506 NDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE 565
              + V+WN M+  Y+ +  S E       M Q G  P+ L+F  VLS+C       Q  
Sbjct: 502 PSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSC----YCSQEA 557

Query: 566 AYFKSMVANYGIE-PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
              +  +   G    C+E  T+++S+ GR   L++A  + + +     V+ W A++ A
Sbjct: 558 QVLRMCILESGYRSACLE--TALISMHGRCRELEQARSVFDEMD-HGDVVSWTAMVSA 612



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 155/592 (26%), Positives = 259/592 (43%), Gaps = 61/592 (10%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQV----LKKGNCLDLFATNVLLNVYVKLNRLPDA 110
           NS++    L +C  + DL    +IH  +    L++ +       N ++N+Y K     DA
Sbjct: 126 NSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDA 185

Query: 111 TKLFDEMPERNTISFVTTIQGYTVSSQFV-EAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
             +F  +PE++ +S+      Y    +F  +A+ +F  +  +    N   F   L    S
Sbjct: 186 IAVFLTIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTS 245

Query: 170 M---GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF----------- 215
           +    W      + + +++ G   +   G ALI+ +  CG  E A  VF           
Sbjct: 246 LRDGTW------LHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDL 299

Query: 216 ---DGLFNDCFE-----EALNFFSQMRAVGFKPNNFTFAFVLKACL--GLDTIRVAKSAH 265
              + + +   E     +A+  F ++R  G +PN+ T   +L A    G+D    A+  H
Sbjct: 300 VSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVD-FGAARKFH 358

Query: 266 GCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK-DVIPWSFMIARYAQTDLS 324
           G   ++ Y  D+ V  A++ +Y K G  S A  +F  +  K DVI W+ M+         
Sbjct: 359 GRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSF 418

Query: 325 IDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV-RVGLLSDVFVSNA 383
              V  F  M  A + PN+ +F+++L AC+  E LD G +IHSL++ R     +  V+  
Sbjct: 419 GKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATM 478

Query: 384 LMDVYAKCGRMENSVELFAES--PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVP 441
           L+ +Y KCG +  +  +F E   P R+ VTWN M+  Y Q     +A     +ML+  V 
Sbjct: 479 LVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVL 538

Query: 442 ATEVTYSSVLRAC--------ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCG 493
              ++++SVL +C          +  LE G +  CL              ALI M+ +C 
Sbjct: 539 PDALSFTSVLSSCYCSQEAQVLRMCILESGYRSACLE------------TALISMHGRCR 586

Query: 494 SITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLS 553
            +  AR VFD M+  + VSW AM+S  + +    EV  +F  MQ  G  P+  T    L 
Sbjct: 587 ELEQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLD 646

Query: 554 ACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
            C +   L  G+    + V   G+E  I    +++++    G   +A    E
Sbjct: 647 TCLDSTTLGLGK-IIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFE 697



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 151/298 (50%), Gaps = 21/298 (7%)

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           + ++LQ+C     L  G + H L+   GL   +F+ N L+++Y +CG +E +  +F++  
Sbjct: 28  YTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPA-TEVTYSSVLRACASLAALEPGM 464
           +RN V+W  +I    Q G   +A  +F  ML E   A    T  ++L ACA+   L  G 
Sbjct: 88  ERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147

Query: 465 QVHCLTVKANYDMD----VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY 520
            +H +  +   + +     +V NA+I+MYAKCGS  DA  VF  + + + VSW AM   Y
Sbjct: 148 SIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAY 207

Query: 521 SM-HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV--ANYGI 577
           +       + L++F  M  +   PN +TF+  L AC++   L  G  +  S++  A  G 
Sbjct: 208 AQERRFYPDALRIFREMLLQPLAPNVITFITALGACTS---LRDG-TWLHSLLHEAGLGF 263

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMI--WRALLGACIIHNNVEIGR 633
           +P   +  +++++ G+ G  + A  + + +  +  + +  W A++ A     +VE GR
Sbjct: 264 DPLAGN--ALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISA-----SVEAGR 314



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 83/361 (22%), Positives = 144/361 (39%), Gaps = 57/361 (15%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           + AT+L +C+ +  L     IH  V + G   D+   N LLN+Y       +A   F+ M
Sbjct: 640 TLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETM 699

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
             R+ +S+      Y  +    EAV LF  +  EG + +   F+  L V           
Sbjct: 700 KARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGK 759

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG-------LFNDCF------- 223
                  + G DS+  V T L+  ++ CG ++ A  +F G       L N          
Sbjct: 760 LFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQHG 819

Query: 224 --EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
             EEA+  F +M+  G +P+  T   ++ AC     +       GC+  +   M  Y  +
Sbjct: 820 FSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVE-----EGCS--SFLTMKEYFGI 872

Query: 282 A--------LLDLYTKSGEISNARRIFEEMPKKD-VIPWSFMIA------------RYAQ 320
           +         +DL  ++G++ +A +I  +MP +D  + W+ ++             R AQ
Sbjct: 873 SPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQ 932

Query: 321 TDLSIDA---------VELFC---RMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSL 368
             L +D            ++C   + + A V   +    +V  A   M  L++G Q+H  
Sbjct: 933 RILELDPHNSAAHVVLSNIYCATGKWKDADVDRKKLLDQNVKNA-PGMSWLEIGKQVHEF 991

Query: 369 V 369
           V
Sbjct: 992 V 992


>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
          Length = 802

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 240/663 (36%), Positives = 359/663 (54%), Gaps = 83/663 (12%)

Query: 226 ALNFFSQMRAVG-FKPNNFTFAFVLKACLGLDTIRVA----------KSAHGCALKTCYE 274
           A+  F  + A G  +P++++F  +L A   L  I V           KS  G AL  C  
Sbjct: 140 AVAVFRSLLASGSLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNA 199

Query: 275 M-DLYV----------AVALLDL---------------YTKSGEISNARRIFEEMPKKDV 308
           +  LY+          A  +LD                Y + G++  AR +FEE+  K  
Sbjct: 200 LVALYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFD 259

Query: 309 IPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSL 368
           + W+ MI+ Y  + ++++A ELF RM    V  ++FTF SVL ACA +     G  +H  
Sbjct: 260 VVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQ 319

Query: 369 VVRVGL----LSDVFVSNALMDVYAKCGR------------------------------- 393
           ++R+       + + V+NAL+  Y+KCG                                
Sbjct: 320 IIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSC 379

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           ++ +VE+F E P +N ++W  M+ GYV  G    A+ +F+KM  E V   + TY+  + A
Sbjct: 380 LDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAA 439

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
           C  L AL+ G Q+H   V+  ++      NALI MYA+CG++ +A L+F +M + + VSW
Sbjct: 440 CGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSW 499

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA 573
           NAMIS    HG   E L++FD M   G  P+ ++F+ VL+AC++ GL+++G  YF+SM  
Sbjct: 500 NAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKR 559

Query: 574 NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGR 633
           ++GI P  +HYT ++ LLGRAG + +A  LI+ +PF+P+  IW A+L  C    ++E+G 
Sbjct: 560 DFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGA 619

Query: 634 LSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMV 682
            +A  +    P+ + T++LLSN Y+ A  W  AA            KEPG SWIE    V
Sbjct: 620 HAADQLFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEAGNKV 679

Query: 683 HYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLA 742
           H F  GDT H + + +   LE +  K RK GY+PD   VL D+   +KE  L+ HSE+LA
Sbjct: 680 HVFLVGDTKHPEAHEVYKFLEMVGAKMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLA 739

Query: 743 LAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCG 802
           + F L  +PP + + ++KNLRIC DCH AI  +SK V REI++RDV RFHHF+DG CSCG
Sbjct: 740 VGFGLLNLPPGATVTVLKNLRICDDCHAAIMFMSKAVGREIVVRDVRRFHHFKDGECSCG 799

Query: 803 DFW 805
           ++W
Sbjct: 800 NYW 802



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 143/550 (26%), Positives = 219/550 (39%), Gaps = 106/550 (19%)

Query: 71  DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP--ERNTISFVTT 128
           DL  A T+ C      +   + AT+ L+  Y   +RLP A   FD +P   R+T+     
Sbjct: 74  DLPAAATLFC-----ADPCPVSATS-LVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAV 127

Query: 129 IQGYTVSSQFVEAVGLFSTLHREGHELNP--FAFTAFLKVLVSMGWAEL--CPCVFACVY 184
           I  Y  +S    AV +F +L   G  L P  ++FTA L     +    +  C  +   V 
Sbjct: 128 ISAYARASHAAPAVAVFRSLLASG-SLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVL 186

Query: 185 KLGHDSNAFVGTALIDAFSVC----------------------------------GCVEF 210
           K G      V  AL+  +  C                                  G V  
Sbjct: 187 KSGAGGALSVCNALVALYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGA 246

Query: 211 ARKVF---DGLFNDCFE-------------EALNFFSQMRAVGFKPNNFTFAFVLKACLG 254
           AR VF   DG F+  +              EA   F +M       + FTF  VL AC  
Sbjct: 247 ARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACAN 306

Query: 255 LDTIRVAKSAHGCALKT----CYEMDLYVAVALLDLYTKSGEISNARRI----------- 299
           +      KS HG  ++       E  L V  AL+  Y+K G I+ ARRI           
Sbjct: 307 VGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVS 366

Query: 300 --------------------FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
                               FEEMP K+ + W  M++ Y     + DA++LF +MR   V
Sbjct: 367 WNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENV 426

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
            P  +T+   + AC  +  L  G Q+H  +V++G        NAL+ +YA+CG ++ +  
Sbjct: 427 KPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHL 486

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +F   P  + V+WN MI    Q G   +A+ +F +M+ E +    +++ +VL AC     
Sbjct: 487 MFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGL 546

Query: 460 LEPGMQVHCLTVKANYDMDVVVA----NALIDMYAKCGSITDAR-LVFDMMNDWNEVSWN 514
           ++ G +          D  ++        LID+  + G I +AR L+  M  +     W 
Sbjct: 547 VDEGFR---YFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWE 603

Query: 515 AMISGYSMHG 524
           A++SG    G
Sbjct: 604 AILSGCRTSG 613



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 198/423 (46%), Gaps = 76/423 (17%)

Query: 280 AVALLDLYTKSGEISNARRIFEEMP--KKDVIPWSFMIARYAQTDLSIDAVELF-CRMRQ 336
           A +L+  Y  +  +  A   F+ +P  ++D +  + +I+ YA+   +  AV +F   +  
Sbjct: 91  ATSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLAS 150

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGN--QIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
             + P+ ++F ++L A   +  + + +  Q+H  V++ G    + V NAL+ +Y KC   
Sbjct: 151 GSLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESP 210

Query: 395 E---NSVELFAESPKRNHVTWNTMIVGYVQLGEVG-----------------KAMI---- 430
           E   ++ ++  E P ++ +TW TM+VGYV+ G+VG                  AMI    
Sbjct: 211 EATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYV 270

Query: 431 ----------MFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVH--CLTVKANY--D 476
                     +F +M+ E+VP  E T++SVL ACA++     G  VH   + ++ N+  +
Sbjct: 271 HSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPE 330

Query: 477 MDVVVANALIDMYAKCGSITDARLVFDMMN-----DW----------------------- 508
             + V NAL+  Y+KCG+I  AR +FD M       W                       
Sbjct: 331 AALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEM 390

Query: 509 ---NEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE 565
              NE+SW  M+SGY   G + + LK+F+ M+    +P + T+ G ++AC   G L+ G+
Sbjct: 391 PYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGK 450

Query: 566 AYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACII 625
                +V   G E       +++++  R G + +A  +   +P   SV  W A++ A   
Sbjct: 451 QLHGHIV-QLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVS-WNAMISALGQ 508

Query: 626 HNN 628
           H +
Sbjct: 509 HGH 511



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 144/637 (22%), Positives = 244/637 (38%), Gaps = 153/637 (24%)

Query: 17  HQSKINAWLRGLSAQAALSTQQC--SNSTTTPITFSVSEFNS---HSYATSLQSCIQNDD 71
           H + I+A+ R   A  A++  +   ++ +  P  +S +   S   H    S++ C Q   
Sbjct: 124 HNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAGGHLPNISVRHCAQ--- 180

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNR---LPDATKLFDEMPERNTISFVTT 128
                 +HC VLK G    L   N L+ +Y+K        DA K+ DEMP ++ +++ T 
Sbjct: 181 ------LHCSVLKSGAGGALSVCNALVALYMKCESPEATRDARKVLDEMPNKDDLTWTTM 234

Query: 129 -------------------------------IQGYTVSSQFVEAVGLFSTLHREGHELNP 157
                                          I GY  S   VEA  LF  +  E   L+ 
Sbjct: 235 VVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDE 294

Query: 158 FAFTAFLKVLVSMGWAELCPCVFACVYKLGH----DSNAFVGTALIDAFSVCGCVEFARK 213
           F FT+ L    ++G       V   + +L      ++   V  AL+  +S CG +  AR+
Sbjct: 295 FTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARR 354

Query: 214 VFD----------------------------------------------GLFNDCF-EEA 226
           +FD                                              G  +  F E+A
Sbjct: 355 IFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDA 414

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           L  F++MR+   KP ++T+A  + AC  L  ++  K  HG  ++  +E       AL+ +
Sbjct: 415 LKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITM 474

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y + G +  A  +F  MP  D + W+ MI+   Q     +A+ELF RM    + P++ +F
Sbjct: 475 YARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISF 534

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
           ++VL AC            HS     GL+ + F               E+    F   P 
Sbjct: 535 LTVLTACN-----------HS-----GLVDEGFR------------YFESMKRDFGIIPG 566

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
            +H T    ++G  + G +G+A  +   M  E  P+    + ++L  C +   +E G   
Sbjct: 567 EDHYTRLIDLLG--RAGRIGEARDLIKTMPFEPTPS---IWEAILSGCRTSGDMELGAHA 621

Query: 467 --HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND----------WNEVS-- 512
                 +   +D   ++   L + Y+  G   DA  V  +M D          W E    
Sbjct: 622 ADQLFKMTPQHDGTYIL---LSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEAGNK 678

Query: 513 WNAMISGYSMHGLSAEVLKVFDL----MQQRGWRPNN 545
            +  + G + H  + EV K  ++    M++ G+ P+ 
Sbjct: 679 VHVFLVGDTKHPEAHEVYKFLEMVGAKMRKLGYVPDT 715


>gi|297801640|ref|XP_002868704.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
 gi|297314540|gb|EFH44963.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
          Length = 710

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 238/638 (37%), Positives = 358/638 (56%), Gaps = 28/638 (4%)

Query: 196 TALIDAFSVCGCVEFARKVFD---------------GLFNDCFE-EALNFFSQMR-AVGF 238
            +LI+ +  CG    ARKVFD               G  N  F+ E L  F  M  +   
Sbjct: 73  NSLINLYVKCGETVRARKVFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDES 132

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
           +PN F    V K+C     I   K  HGC LK+      +V   L+ +Y+       A R
Sbjct: 133 RPNEFVATVVFKSCSSSGRIEEGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIR 192

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           + +++P  D+  +S  ++ Y +     +  E+  RM +  +  +  T++S L+ C+ +  
Sbjct: 193 VLDDLPYCDLSVFSSALSGYLECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRD 252

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           L+L  QIHS +VR+G  S+V  S A++++Y KCG++  +  +F  +  +N V   T++  
Sbjct: 253 LNLARQIHSRMVRLGFNSEVEASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDA 312

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           Y Q     +A+ +FSKM  ++VP  E T++  L + A L+ L+ G  +H L +K+ Y   
Sbjct: 313 YFQDKSFEEALNLFSKMDTKEVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYRNH 372

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
           V+V NAL++MYAK GSI DAR  F  M   + V+WN MI G+S HGL  E L+ FD M  
Sbjct: 373 VMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMICGFSHHGLGREGLEAFDRMMI 432

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLD 598
            G  PN +TF+GVL ACS+ G +EQG  YF  ++  + ++P ++HYT +V LL +AG   
Sbjct: 433 AGEIPNRITFIGVLQACSHVGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAGMFK 492

Query: 599 KAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYA 658
            A   +   P +  V+ WRALL AC +  N  +G+  A++ +   P D   +VLLSNI+A
Sbjct: 493 DAEDFMRTAPIEWDVVAWRALLNACYVRRNFRLGKKVAEYAIYKYPNDSGVYVLLSNIHA 552

Query: 659 MARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNM 707
            +R WE           +   KEPG+SWI  +   H F A +  H ++ +I   ++ +  
Sbjct: 553 KSREWEGVAEVRSLMNKRGVKKEPGVSWIGIRNQTHVFLAEENQHPEITLIYAKIKEVLS 612

Query: 708 KSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVD 767
           K R  GY PD++ V  DV E+++E  L  HSEKLA+A+ L K P +SP+ + KN+RIC D
Sbjct: 613 KIRPLGYSPDVAGVFHDVDEEQREDNLSYHSEKLAVAYGLMKTPENSPLYVTKNVRICDD 672

Query: 768 CHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           CH+AIK+ISKI +R I+IRD +RFHHF+DG CSC D+W
Sbjct: 673 CHSAIKLISKISKRYIVIRDSNRFHHFRDGQCSCCDYW 710



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 131/482 (27%), Positives = 232/482 (48%), Gaps = 28/482 (5%)

Query: 63  LQSCIQNDDLQTAMTIHCQVL---KKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPE 119
           L+ C  +  L+T  +IH  ++   +     D++  N L+N+YVK      A K+FD MPE
Sbjct: 38  LKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFDLMPE 97

Query: 120 RNTISFVTTIQGYTVSSQFVEAVGLF-STLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
           RN +S+   ++GY  S    E + LF S +  +    N F  T   K   S G  E    
Sbjct: 98  RNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRIEEGKQ 157

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL--------------FNDC-- 222
              C  K G  S+ FV   L+  +S+C     A +V D L              + +C  
Sbjct: 158 FHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGA 217

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
           F+E      +M       +N T+   L+ C  L  + +A+  H   ++  +  ++  + A
Sbjct: 218 FKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEVEASGA 277

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           ++++Y K G++  A+R+F+    ++++  + ++  Y Q     +A+ LF +M    V PN
Sbjct: 278 IINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPN 337

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           ++TF   L + A +  L  G+ +H LV++ G  + V V NAL+++YAK G +E++ + F+
Sbjct: 338 EYTFAISLNSIAELSLLKHGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFS 397

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
               R+ VTWNTMI G+   G   + +  F +M+        +T+  VL+AC+ +  +E 
Sbjct: 398 GMTFRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEIPNRITFIGVLQACSHVGFVEQ 457

Query: 463 GM-QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN----DWNEVSWNAMI 517
           G+   + L  K N   D+     ++ + +K G   DA    D M     +W+ V+W A++
Sbjct: 458 GLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAGMFKDAE---DFMRTAPIEWDVVAWRALL 514

Query: 518 SG 519
           + 
Sbjct: 515 NA 516



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 189/377 (50%), Gaps = 6/377 (1%)

Query: 248 VLKACLGLDTIRVAKSAHGCAL---KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
           +LK C     +R  +S HG  +   ++    D+Y   +L++LY K GE   AR++F+ MP
Sbjct: 37  LLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFDLMP 96

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA-PNQFTFVSVLQACATMEGLDLGN 363
           +++V+ W  M+  Y  +    + ++LF  M  +  + PN+F    V ++C++   ++ G 
Sbjct: 97  ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRIEEGK 156

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
           Q H   ++ GL+S  FV N L+ +Y+ C     ++ +  + P  +   +++ + GY++ G
Sbjct: 157 QFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECG 216

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN 483
              +   +  +M +E +    +TY S LR C++L  L    Q+H   V+  ++ +V  + 
Sbjct: 217 AFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEVEASG 276

Query: 484 ALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRP 543
           A+I+MY KCG +  A+ VFD  +  N V    ++  Y       E L +F  M  +   P
Sbjct: 277 AIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPP 336

Query: 544 NNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKL 603
           N  TF   L++ +   LL+ G+     +V   G    +    ++V++  ++G ++ A K 
Sbjct: 337 NEYTFAISLNSIAELSLLKHGD-LLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKA 395

Query: 604 IEGIPFQPSVMIWRALL 620
             G+ F+  ++ W  ++
Sbjct: 396 FSGMTFR-DIVTWNTMI 411



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 120/276 (43%), Gaps = 18/276 (6%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +Y + L+ C    DL  A  IH ++++ G   ++ A+  ++N+Y K  ++  A ++FD  
Sbjct: 239 TYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEVEASGAIINMYGKCGKVLYAQRVFDNT 298

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
             +N +   T +  Y     F EA+ LFS +  +    N + F   L  +  +   +   
Sbjct: 299 HAQNIVLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAISLNSIAELSLLKHGD 358

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-FNDCF------------- 223
            +   V K G+ ++  VG AL++ ++  G +E ARK F G+ F D               
Sbjct: 359 LLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMICGFSHHG 418

Query: 224 --EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT-CYEMDLYVA 280
              E L  F +M   G  PN  TF  VL+AC  +  +          +K    + DL   
Sbjct: 419 LGREGLEAFDRMMIAGEIPNRITFIGVLQACSHVGFVEQGLYYFNQLMKKFNVQPDLQHY 478

Query: 281 VALLDLYTKSGEISNARRIFEEMPKK-DVIPWSFMI 315
             ++ L +K+G   +A       P + DV+ W  ++
Sbjct: 479 TCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRALL 514



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 69/124 (55%), Gaps = 4/124 (3%)

Query: 448 SSVLRACASLAALEPGMQVH---CLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDM 504
           + +L+ CA+ + L  G  +H    +T +++   DV   N+LI++Y KCG    AR VFD+
Sbjct: 35  NELLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFDL 94

Query: 505 MNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQ-QRGWRPNNLTFVGVLSACSNGGLLEQ 563
           M + N VSW AM+ GY   G   EVLK+F  M      RPN      V  +CS+ G +E+
Sbjct: 95  MPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRIEE 154

Query: 564 GEAY 567
           G+ +
Sbjct: 155 GKQF 158



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 101/254 (39%), Gaps = 18/254 (7%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N +++A SL S  +   L+    +H  VLK G    +   N L+N+Y K   + DA K F
Sbjct: 337 NEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAF 396

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             M  R+ +++ T I G++      E +  F  +   G   N   F   L+    +G+ E
Sbjct: 397 SGMTFRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEIPNRITFIGVLQACSHVGFVE 456

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMR 234
                F  + K  +     V   L     + G +  A     G+F D    A +F   MR
Sbjct: 457 QGLYYFNQLMKKFN-----VQPDLQHYTCIVGLLSKA-----GMFKD----AEDF---MR 499

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
               + +   +  +L AC      R+ K     A+   Y  D  V V L +++ KS E  
Sbjct: 500 TAPIEWDVVAWRALLNACYVRRNFRLGKKVAEYAIYK-YPNDSGVYVLLSNIHAKSREWE 558

Query: 295 NARRIFEEMPKKDV 308
               +   M K+ V
Sbjct: 559 GVAEVRSLMNKRGV 572


>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 225/569 (39%), Positives = 336/569 (59%), Gaps = 11/569 (1%)

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
           +LK C     +   K+ H   L    + DL  +  L+++Y+K G +  AR++F+EMP + 
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
           ++ W+ MI    Q     +A++L  +M++     ++FT  SVL ACA    L     +H+
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189

Query: 368 LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK 427
             ++  +  +VFV+ AL+DVYAKCG M+++V +F   P R+ VTW++M  GYVQ     +
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249

Query: 428 AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALID 487
           A+ +F K  E  +   +   SSV+ ACA LAA+  G Q++ L  K+ +  ++ VA++LID
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLID 309

Query: 488 MYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLT 547
           MYAKCG I ++  VF  +   N V WNAMISG S H  S EV+ +F+ MQQ G  PN++T
Sbjct: 310 MYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVT 369

Query: 548 FVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGI 607
           FV VLSAC + GL+ +G+ YF  M   + + P + HY+ MV  L RAG + +A  LI  +
Sbjct: 370 FVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKL 429

Query: 608 PFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA 667
           PF  S  +W +LL +C  H N+E+  ++A+ + D EP +   ++LLSN+YA    W++ A
Sbjct: 430 PFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVA 489

Query: 668 -----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIP 716
                       KE G SWIE +  VH F  G+ +H  +  I   L  +  + +K GY  
Sbjct: 490 KMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKV 549

Query: 717 DLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIIS 776
           +    L  V E  K+  L  HSEKLA    L  +PP++PIRI+KNLRIC DCH+ +K+ S
Sbjct: 550 ETQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLAS 609

Query: 777 KIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           K   R++I+RD +RFHHF++GCCSCGDFW
Sbjct: 610 KFFCRDVIVRDTNRFHHFKNGCCSCGDFW 638



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 109/357 (30%), Positives = 189/357 (52%), Gaps = 18/357 (5%)

Query: 186 LGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF----------------EEALNF 229
           +G  ++      LI+ +S CG V+FAR+VFD + +                    EAL+ 
Sbjct: 93  MGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDL 152

Query: 230 FSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK 289
             QM+  G   + FT + VL AC     +   +  H  A+K   +++++VA ALLD+Y K
Sbjct: 153 LLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAK 212

Query: 290 SGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSV 349
            G + +A  +FE MP + V+ WS M A Y Q ++   A+ LF +  +  +  +QF   SV
Sbjct: 213 CGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSV 272

Query: 350 LQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNH 409
           + ACA +  +  G Q+++L+ + G  S++FV+++L+D+YAKCG +E S ++F +  KRN 
Sbjct: 273 ICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNV 332

Query: 410 VTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCL 469
           V WN MI G  +     + MI+F KM +  +   +VT+ SVL AC  +  +  G +   L
Sbjct: 333 VLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDL 392

Query: 470 TVKANY-DMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHG 524
             K ++   +V   + ++D  ++ G I +A  L+  +  + +   W ++++    HG
Sbjct: 393 MTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHG 449



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 206/418 (49%), Gaps = 23/418 (5%)

Query: 32  AALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDL 91
           A+LS+  C      P T   +  +       L+ C +   L      H Q+L  G   DL
Sbjct: 40  ASLSSSSCIVECEKPTTKDFNATHVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDL 99

Query: 92  FATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHRE 151
             +N+L+N+Y K   +  A ++FDEMP R+ +S+ T I   T + +  EA+ L   + RE
Sbjct: 100 LTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQRE 159

Query: 152 GHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFA 211
           G   + F  ++ L    +      C  + A   K   D N FV TAL+D ++ CG ++ A
Sbjct: 160 GTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDA 219

Query: 212 RKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGL 255
             VF+ +                 N+ +E+AL  F +    G K + F  + V+ AC GL
Sbjct: 220 VCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGL 279

Query: 256 DTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMI 315
             +   K  +    K+ +  +++VA +L+D+Y K G I  + ++F ++ K++V+ W+ MI
Sbjct: 280 AAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMI 339

Query: 316 ARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLL 375
           +  ++   S++ + LF +M+Q  ++PN  TFVSVL AC  M  +  G +   L+ +   L
Sbjct: 340 SGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHL 399

Query: 376 S-DVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT-WNTMIV-----GYVQLGEVG 426
           + +VF  + ++D  ++ G++  + +L ++ P     + W +++      G ++L EV 
Sbjct: 400 APNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVA 457


>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 256/662 (38%), Positives = 375/662 (56%), Gaps = 46/662 (6%)

Query: 184 YKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL--------------FNDCFE--EAL 227
           + L    N F    LI+A++    +  AR+VFD +              + D  E    L
Sbjct: 67  FHLTQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTL 126

Query: 228 NFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV--ALLD 285
             F ++R +    + FT + V+ AC   D + + +  H C +  C   D Y +V  A+L 
Sbjct: 127 RLFEEVRELRLGLDGFTLSGVITACG--DDVGLVRQLH-CFVVVCGH-DCYASVNNAVLA 182

Query: 286 LYTKSGEISNARRIFEEMPK---KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
            Y++ G +S ARR+F EM +   +D + W+ MI    Q    ++AV LF  M +  +  +
Sbjct: 183 CYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVD 242

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC-GRMENSVELF 401
            FT  SVL A   ++ L  G Q H ++++ G   +  V + L+D+Y+KC G M    ++F
Sbjct: 243 MFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVF 302

Query: 402 AESPKRNHVTWNTMIVG---YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            E    + V WNTMI G   Y  L E G  +  F +M        + ++  V  AC++L+
Sbjct: 303 EEITAPDLVLWNTMISGFSLYEDLSEDG--LWCFREMQRNGFRPDDCSFVCVTSACSNLS 360

Query: 459 ALEPGMQVHCLTVKANYDMD-VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
           +   G QVH L +K++   + V V NAL+ MY+KCG++ DAR VFD M + N VS N+MI
Sbjct: 361 SPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMI 420

Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
           +GY+ HG+  E L++F+LM ++   PN++TF+ VLSAC + G +E+G+ YF  M   + I
Sbjct: 421 AGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCI 480

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQ 637
           EP  EHY+ M+ LLGRAG L +A ++IE +PF P  + W  LLGAC  H NVE+   +A 
Sbjct: 481 EPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAAN 540

Query: 638 HILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFR 686
             L  EP + A +V+LSN+YA A  WE+AA+           K+PG SWIE    VH F 
Sbjct: 541 EFLRLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFV 600

Query: 687 AGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLS-AVLRD--VREDEKERYLWVHSEKLAL 743
           A DTSH  +  I   +  +  K ++AGY+PD+  A+++D  V  DE+ER L  HSEKLA+
Sbjct: 601 AEDTSHPMIKEIHVYMGKMLKKMKQAGYVPDIRWALVKDEEVEPDERERRLLYHSEKLAV 660

Query: 744 AFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGD 803
           AF L       PI ++KNLRIC DCH A+K+IS +  REI +RD HRFH F++G CSC D
Sbjct: 661 AFGLISTEEGVPILVVKNLRICGDCHNAVKLISALTGREITVRDTHRFHCFKEGHCSCRD 720

Query: 804 FW 805
           +W
Sbjct: 721 YW 722



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 125/467 (26%), Positives = 227/467 (48%), Gaps = 42/467 (8%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           ++F+ N L+N Y K + +  A ++FDE+P+ + +S+ T I  Y    +    + LF  + 
Sbjct: 74  NVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVR 133

Query: 150 REGHELNPFAFTAFLKVLV-SMGWAELCPC-VFACVYKLGHDSNAFVGTALIDAFSVCGC 207
                L+ F  +  +      +G      C V  C    GHD  A V  A++  +S  G 
Sbjct: 134 ELRLGLDGFTLSGVITACGDDVGLVRQLHCFVVVC----GHDCYASVNNAVLACYSRKGF 189

Query: 208 VEFARKVF--------------DGLFNDCFE-----EALNFFSQMRAVGFKPNNFTFAFV 248
           +  AR+VF              + +   C +     EA+  F +M   G K + FT A V
Sbjct: 190 LSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASV 249

Query: 249 LKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK-SGEISNARRIFEEMPKKD 307
           L A   +  +   +  HG  +K+ +  + +V   L+DLY+K +G +   R++FEE+   D
Sbjct: 250 LTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPD 309

Query: 308 VIPWSFMIARYA-QTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIH 366
           ++ W+ MI+ ++   DLS D +  F  M++    P+  +FV V  AC+ +    LG Q+H
Sbjct: 310 LVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVH 369

Query: 367 SLVVRVGL-LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEV 425
           +L ++  +  + V V+NAL+ +Y+KCG + ++  +F   P+ N V+ N+MI GY Q G  
Sbjct: 370 ALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVE 429

Query: 426 GKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV-------HCLTVKANYDMD 478
            +++ +F  MLE+ +    +T+ +VL AC     +E G +         C+  +A +   
Sbjct: 430 VESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEH--- 486

Query: 479 VVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHG 524
               + +ID+  + G + +A R++  M  +   + W  ++     HG
Sbjct: 487 ---YSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHG 530



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 197/414 (47%), Gaps = 38/414 (9%)

Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISN-------- 295
           TF  +LKAC+    +   K  H    K+      Y++     LY+K G + N        
Sbjct: 11  TFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLT 70

Query: 296 -----------------------ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFC 332
                                  ARR+F+E+P+ D++ ++ +IA YA        + LF 
Sbjct: 71  QYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFE 130

Query: 333 RMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCG 392
            +R+  +  + FT   V+ AC   + + L  Q+H  VV  G      V+NA++  Y++ G
Sbjct: 131 EVRELRLGLDGFTLSGVITACG--DDVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKG 188

Query: 393 RMENSVELF---AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSS 449
            +  +  +F    E   R+ V+WN MIV   Q  E  +A+ +F +M+   +     T +S
Sbjct: 189 FLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMAS 248

Query: 450 VLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKC-GSITDARLVFDMMNDW 508
           VL A   +  L  G Q H + +K+ +  +  V + LID+Y+KC GS+ + R VF+ +   
Sbjct: 249 VLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAP 308

Query: 509 NEVSWNAMISGYSMH-GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAY 567
           + V WN MISG+S++  LS + L  F  MQ+ G+RP++ +FV V SACSN      G+  
Sbjct: 309 DLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQV 368

Query: 568 FKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLG 621
               + +      +    ++V++  + G++  A ++ + +P   +V +   + G
Sbjct: 369 HALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAG 422



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 115/428 (26%), Positives = 204/428 (47%), Gaps = 37/428 (8%)

Query: 69  NDDLQTAMTIHCQVLKKGNCLDLFAT--NVLLNVYVKLNRLPDATKLFDEMPE---RNTI 123
            DD+     +HC V+  G+  D +A+  N +L  Y +   L +A ++F EM E   R+ +
Sbjct: 152 GDDVGLVRQLHCFVVVCGH--DCYASVNNAVLACYSRKGFLSEARRVFREMGEGGGRDEV 209

Query: 124 SFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFA----FTAFLKVLVSMGWAELCPCV 179
           S+   I       + +EAVGLF  + R G +++ F      TAF  V   +G  +     
Sbjct: 210 SWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQF---- 265

Query: 180 FACVYKLGHDSNAFVGTALIDAFSVC-GCVEFARKVFD-----------------GLFND 221
              + K G   N+ VG+ LID +S C G +   RKVF+                  L+ D
Sbjct: 266 HGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMISGFSLYED 325

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD-LYVA 280
             E+ L  F +M+  GF+P++ +F  V  AC  L +  + K  H  A+K+    + + V 
Sbjct: 326 LSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVN 385

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
            AL+ +Y+K G + +ARR+F+ MP+ + +  + MIA YAQ  + ++++ LF  M +  +A
Sbjct: 386 NALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIA 445

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVV-RVGLLSDVFVSNALMDVYAKCGRMENSVE 399
           PN  TF++VL AC     ++ G +  +++  R  +  +    + ++D+  + G+++ +  
Sbjct: 446 PNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAER 505

Query: 400 LFAESP-KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
           +    P     + W T++    + G V  A+   ++ L  + P     Y  +    AS A
Sbjct: 506 IIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLE-PYNAAPYVMLSNMYASAA 564

Query: 459 ALEPGMQV 466
             E    V
Sbjct: 565 RWEEAATV 572


>gi|358343602|ref|XP_003635889.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|358344096|ref|XP_003636129.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355501824|gb|AES83027.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355502064|gb|AES83267.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 662

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 248/643 (38%), Positives = 361/643 (56%), Gaps = 44/643 (6%)

Query: 192 AFVGTALIDAFSVCGCVEFARKVFDGLFNDCF----------------EEALNFFSQMRA 235
           +F G  LID +  C  +  ARK+FD + N                   +EA+  +S M  
Sbjct: 35  SFFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYSNMLF 94

Query: 236 VGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM-DLYVAVALLDLYTKSGEIS 294
            G  P+ +TF+ + KA   +   R  + AHG A+   +E+ D +VA  ++D+Y K G++ 
Sbjct: 95  EGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMK 154

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
           +AR +F+ +  KDV+ ++ +I  Y Q  L  +A+E+F  M  + + PN++T  SVL +C 
Sbjct: 155 DARFVFDRVLDKDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCG 214

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
            +  L  G  IH LVV+ GL S V    +L+ +Y+KC  +E+S+++F      +HVTW +
Sbjct: 215 NLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTS 274

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
            IVG VQ G    A+ MF +M+   +     T SS+L AC+SLA LE G Q+H +TVK  
Sbjct: 275 FIVGLVQNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLG 334

Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
            D +  V  ALI +Y KCG++  AR VFD + + + VS N MI  Y+ +G   E L++F+
Sbjct: 335 VDGNKFVDAALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYAYAQNGFGHEALELFE 394

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
            +++ G  PN +TF+ +L AC+N GL+E+G   F  +  N+ IE   +HYT M+ LLGRA
Sbjct: 395 RLKKLGLEPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRA 454

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLS 654
              ++A  LIE     P V+ WR LL AC IH  VE+     + +LD  P D  TH+LL+
Sbjct: 455 KRFEEATMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLT 513

Query: 655 NIYAMARSWE-----KAASKE------PGLSWIENQGMVHYFRAGDTSHADMNIIRGMLE 703
           NIYA A  W+     K+A ++      P +SW++    VH F AGD SH   + I  ML 
Sbjct: 514 NIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLH 573

Query: 704 WLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKM-PPSSPIRIIKNL 762
            L  K    GY PD   VL+D+ E++K   L+ HSEKLA+AFAL+K    ++ IRI KNL
Sbjct: 574 ELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNTAIRIFKNL 633

Query: 763 RICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           R+C D               II RD  RFHHF+ G CSC D+W
Sbjct: 634 RVCGDY--------------IIARDAKRFHHFKGGICSCKDYW 662



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/485 (26%), Positives = 238/485 (49%), Gaps = 21/485 (4%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           Y + +  C     L T  ++H  +LK G+    F  + L++ Y+K + + +A KLFDEMP
Sbjct: 4   YTSLIAQCTNKKSLTTLKSLHTHILKSGSLFSFFG-HKLIDGYIKCSVITEARKLFDEMP 62

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
            R+ +++ + I  +    +  EA+ L+S +  EG   + + F+A  K    MG +     
Sbjct: 63  NRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQK 122

Query: 179 VFACVYKLGHD-SNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF-------------- 223
                  LG + S+ FV T ++D ++  G ++ AR VFD + +                 
Sbjct: 123 AHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHG 182

Query: 224 --EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
              EAL  F  M     KPN +T A VL +C  L  +   K  HG  +K   E  +    
Sbjct: 183 LDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQT 242

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           +LL +Y+K   + ++ ++F  +     + W+  I    Q      A+ +F  M +  ++P
Sbjct: 243 SLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISP 302

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           N FT  S+L AC+++  L+ G QIH++ V++G+  + FV  AL+ +Y KCG +E +  +F
Sbjct: 303 NHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVF 362

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
               + + V+ NTMI  Y Q G   +A+ +F ++ +  +    VT+ S+L AC +   +E
Sbjct: 363 DSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVE 422

Query: 462 PGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
            G Q+  L ++ N+ +++   +   +ID+  +     +A ++ +   + + + W  +++ 
Sbjct: 423 EGCQIFSL-IRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEEGKNPDVIQWRTLLNA 481

Query: 520 YSMHG 524
             +HG
Sbjct: 482 CKIHG 486



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 121/284 (42%), Gaps = 29/284 (10%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N ++ A+ L SC    DL     IH  V+K G    + +   LL +Y K N + D+ K+F
Sbjct: 202 NEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVF 261

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           + +   + +++ + I G   + +   A+ +F  + R     N F  ++ L    S+   E
Sbjct: 262 NSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLAMLE 321

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
               + A   KLG D N FV  ALI  +  CG VE AR VFD L                
Sbjct: 322 AGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYAYA 381

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKAC-------LGLDTIRVAKSAHGCALKT 271
            N    EAL  F +++ +G +PN  TF  +L AC        G     + ++ H   L  
Sbjct: 382 QNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTR 441

Query: 272 CYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMI 315
               D Y    ++DL  ++     A  + EE    DVI W  ++
Sbjct: 442 ----DHY--TCMIDLLGRAKRFEEATMLIEEGKNPDVIQWRTLL 479


>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
 gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
          Length = 581

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 230/585 (39%), Positives = 348/585 (59%), Gaps = 16/585 (2%)

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           M  +G +P+NFTF F++KAC  L         H   +K  Y+  ++++ +L+ +Y K  +
Sbjct: 1   MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
              +R++F+EMP K+ + WS +I    Q D   +   LF   RQ     ++ +  ++L A
Sbjct: 61  YELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLF---RQMLSEGSRPSRGAILNA 117

Query: 353 CATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTW 412
            A +   +  + ++ +VV  GL  D  V +A   ++A+CGR+E + +LF     ++ VTW
Sbjct: 118 MACVRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTW 177

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVH-CLTV 471
            T I  YV+     +A+ +  +M+ + +    +T   V+RAC++LA+ +    VH  +T 
Sbjct: 178 ATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGIITT 237

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
              Y+  + V  ALID+Y KCGS+T AR VFD M + N ++W+AMISGY MHG   E L 
Sbjct: 238 GFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALN 297

Query: 532 VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLL 591
           +FD M+    +P+++TFV +LSACS+ GL+ +G   F SM  ++G+ P  EHY  MV +L
Sbjct: 298 LFDQMKA-SVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDIL 356

Query: 592 GRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHV 651
           GRAG LD+A   IE +P +P+  +W ALLGAC IH NV++  + A+ + D +P +   +V
Sbjct: 357 GRAGKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDPHNAGRYV 416

Query: 652 LLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRG 700
           +L NIY +    ++A S           K  G S IE +  ++ F AGD SH   ++I  
Sbjct: 417 ILYNIYTLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAGDRSHPQTDLIYS 476

Query: 701 MLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIK 760
            LE L  + R+ GY PD++ VL DV E+ KE  L++HSEKLA+ F L  + P S IRI K
Sbjct: 477 ELERLMDRIRQEGYTPDINFVLHDVDEETKESMLYLHSEKLAIVFGLLNLGPGSVIRIRK 536

Query: 761 NLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           NLR+C DCHTA K ISK+  REI++RD HRFHHF++G CSC D+W
Sbjct: 537 NLRVCGDCHTATKFISKVTGREIVVRDAHRFHHFKNGACSCRDYW 581



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 176/374 (47%), Gaps = 31/374 (8%)

Query: 65  SCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTIS 124
           SC+++   +  + IH  V+K G    +F +N L+ +Y K ++   + ++FDEMP++N +S
Sbjct: 21  SCLRH--FEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYELSRQVFDEMPDKNAVS 78

Query: 125 FVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVY 184
           +   I       +  E   LF  +  EG   +     A L  +  +   E    V+  V 
Sbjct: 79  WSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSR---GAILNAMACVRSHEEADDVYRVVV 135

Query: 185 KLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN----------------DCFEEALN 228
           + G D +  V +A    F+ CG VE ARK+FDG+ +                D   EAL 
Sbjct: 136 ENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATTIEAYVKADMPLEALG 195

Query: 229 FFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT-CYEMDLYVAVALLDLY 287
              QM   G  P+  T   V++AC  L + ++A   HG       Y   L V  AL+DLY
Sbjct: 196 LLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGIITTGFFYNQLLAVETALIDLY 255

Query: 288 TKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFV 347
            K G ++ AR++F+ M ++++I WS MI+ Y       +A+ LF +M+ A V P+  TFV
Sbjct: 256 VKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNLFDQMK-ASVKPDHITFV 314

Query: 348 SVLQACA----TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
           S+L AC+      EG +  N   S+    G+         ++D+  + G+++ + +    
Sbjct: 315 SILSACSHSGLVAEGWECFN---SMARDFGVTPRPEHYACMVDILGRAGKLDEACDFIER 371

Query: 404 SPKR-NHVTWNTMI 416
            P R N   W  ++
Sbjct: 372 MPVRPNAAVWGALL 385



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 94/396 (23%), Positives = 178/396 (44%), Gaps = 29/396 (7%)

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
           R G + + F F   +K    +   E    +   V K G+ S  F+  +LI  +  C   E
Sbjct: 3   RLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYE 62

Query: 210 FARKVFDG----------------LFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL 253
            +R+VFD                 L +D  +E  + F QM + G +P+      +L A  
Sbjct: 63  LSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSR---GAILNAMA 119

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSF 313
            + +   A   +   ++   + D  V  A   ++ + G +  AR++F+ +  KD++ W+ 
Sbjct: 120 CVRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWAT 179

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
            I  Y + D+ ++A+ L  +M    + P+  T + V++AC+T+    L + +H ++    
Sbjct: 180 TIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGIITTGF 239

Query: 374 LLSDVF-VSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMF 432
             + +  V  AL+D+Y KCG +  + ++F    +RN +TW+ MI GY   G   +A+ +F
Sbjct: 240 FYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNLF 299

Query: 433 SKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA----LIDM 488
            +M +  V    +T+ S+L AC+    +  G +  C    A  D  V         ++D+
Sbjct: 300 DQM-KASVKPDHITFVSILSACSHSGLVAEGWE--CFNSMAR-DFGVTPRPEHYACMVDI 355

Query: 489 YAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
             + G + +A   +  M    N   W A++    +H
Sbjct: 356 LGRAGKLDEACDFIERMPVRPNAAVWGALLGACRIH 391


>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
 gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
          Length = 693

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 231/594 (38%), Positives = 345/594 (58%), Gaps = 12/594 (2%)

Query: 224 EEALNFFSQMRAVG-FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
           E+AL+ F +M  V    P+  T A  LK+C  + T+ V +     A+K     D +V  +
Sbjct: 100 EDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSS 159

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+ +Y    +++ A+ +F+ + +  V+ W+ +I  Y +    ++ VE+F  M +  VA +
Sbjct: 160 LIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFD 219

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           + T VSV+ AC  +    LG  +   V   GL+ +  +  AL+D+YAKCG +  +  LF 
Sbjct: 220 EITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFD 279

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
               R+ V W+ MI GY Q  +  +A+ +FS+M   +V   +VT  SVL ACA L ALE 
Sbjct: 280 GMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALET 339

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G  VH    +    + +++  AL+D YAKCG I DA   F+ M   N  +W A+I G + 
Sbjct: 340 GKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMAT 399

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
           +G   E L++F  M++    P ++TF+GVL ACS+  L+E+G  +F SM  +YGI+P  E
Sbjct: 400 NGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAE 459

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDF 642
           HY  +V LLGRAG +D+A + I  +P +P+ +IWRALL +C +H NVEIG  + + I+  
Sbjct: 460 HYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALKQIVSL 519

Query: 643 EPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTS 691
            P     ++LLSNIYA    W+ AA            K PG S IE  G+V  F A D+ 
Sbjct: 520 NPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCSLIELDGVVVEFFAEDSD 579

Query: 692 HADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMP 751
           H  +  I   +E +  + + AGYIP+ + V  +V E EKE  +  HSEKLA+AF L K+ 
Sbjct: 580 HPQLKEIYQKVEEMIDRIKMAGYIPNTADVRLEVDEHEKEVSVSHHSEKLAIAFGLMKLD 639

Query: 752 PSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           P + IR+ KNLR+C DCH+A K+ISK+  REI++RD +RFHHF+DG CSC D+W
Sbjct: 640 PGATIRLSKNLRVCTDCHSATKLISKVYNREIVVRDRNRFHHFKDGTCSCNDYW 693



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 99/380 (26%), Positives = 169/380 (44%), Gaps = 18/380 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           + H+ A +L+SC +   L     I    +K+G   D F  + L+++Y     +  A  LF
Sbjct: 118 DQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLF 177

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D + E   + +   I  Y  +  ++E V +F  +   G   +     + +     +G A+
Sbjct: 178 DAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAK 237

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN-------------- 220
           L   V   V + G   N  + TALID ++ CG +  AR++FDG+ +              
Sbjct: 238 LGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYT 297

Query: 221 --DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
             D   EAL  FS+M+    +PN+ T   VL AC  L  +   K  H    +    + + 
Sbjct: 298 QADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTII 357

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           +  AL+D Y K G I +A   FE MP K+   W+ +I   A      +A+ELF  MR+A 
Sbjct: 358 LGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKAS 417

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQ-IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
           + P   TF+ VL AC+    ++ G +   S+    G+         ++D+  + G ++ +
Sbjct: 418 IEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEA 477

Query: 398 VELFAESP-KRNHVTWNTMI 416
            +     P + N V W  ++
Sbjct: 478 YQFIRTMPIEPNAVIWRALL 497



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 82/379 (21%), Positives = 149/379 (39%), Gaps = 66/379 (17%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
           F+  +  + + +C +  D +    +   V +KG   +      L+++Y K   L  A +L
Sbjct: 218 FDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRL 277

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           FD M  R+ +++   I GYT + Q  EA+ LFS +     E N     + L     +G  
Sbjct: 278 FDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGAL 337

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL--------------- 218
           E    V + + +        +GTAL+D ++ CGC++ A + F+ +               
Sbjct: 338 ETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGM 397

Query: 219 -FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
             N    EAL  FS MR    +P + TF  VL AC           +H C          
Sbjct: 398 ATNGRGREALELFSSMRKASIEPTDVTFIGVLMAC-----------SHSCL--------- 437

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIP-----WSFMIARYAQTDLSIDAVELFC 332
                          +   RR F+ M +   I      +  ++    +  L  +A +   
Sbjct: 438 ---------------VEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQF-- 480

Query: 333 RMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD---VFVSNALMDVYA 389
            +R   + PN   + ++L +CA  + +++G +    +V +        + +SN    +YA
Sbjct: 481 -IRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSN----IYA 535

Query: 390 KCGRMENSVELFAESPKRN 408
             G+ +N+  +  E   R 
Sbjct: 536 SVGQWKNAAMIRKEMKDRG 554



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 56/259 (21%), Positives = 110/259 (42%), Gaps = 24/259 (9%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N  +  + L +C     L+T   +H  + +K   L +     L++ Y K   + DA +
Sbjct: 318 EPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVE 377

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
            F+ MP +N+ ++   I+G   + +  EA+ LFS++ +    + P   T F+ VL++   
Sbjct: 378 AFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKA--SIEPTDVT-FIGVLMA--- 431

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN-DCFEEALNFFS 231
                C  +C+ + G         ++   + +    E    V D L      +EA  F  
Sbjct: 432 -----CSHSCLVEEGRRHF----DSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQF-- 480

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSA--HGCALKTCYEMDLYVAVALLDLYTK 289
            +R +  +PN   +  +L +C     + + + A     +L   +  D    + L ++Y  
Sbjct: 481 -IRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALKQIVSLNPSHSGDY---ILLSNIYAS 536

Query: 290 SGEISNARRIFEEMPKKDV 308
            G+  NA  I +EM  + +
Sbjct: 537 VGQWKNAAMIRKEMKDRGI 555


>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 923

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 252/782 (32%), Positives = 404/782 (51%), Gaps = 33/782 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N+++ AT +  C   +D    + +   V+  G    +   N L+ ++  L R+ DA +LF
Sbjct: 144 NANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLF 203

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFT--AFLKVLVSMGW 172
           D M ER+ IS+   I  Y+    + +   + S + R G E+ P   T  + + V  S   
Sbjct: 204 DRMEERDRISWNAMISMYSHEEVYSKCFIVLSDM-RHG-EVKPDVTTLCSLVSVCASSDL 261

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------------- 219
             L   + +     G   +  +  AL++ +S  G ++ A  +F  +              
Sbjct: 262 VALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISS 321

Query: 220 ----NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
               N C E        ++     PN+ TF+  L AC   + +   ++ H   L+   + 
Sbjct: 322 YVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQN 381

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
            L +  +LL +Y+K   + +  R+FE MP  DV+  + +   YA  +   +A+ +F  MR
Sbjct: 382 VLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMR 441

Query: 336 QAFVAPNQFTFVSVLQACATMEGL-DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
              + PN  T +++   C ++  L   G  +H+ V + GLLSD +++N+L+ +YA CG +
Sbjct: 442 GTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDL 501

Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
           E+S  +F+    ++ ++WN +I   V+ G   +A+ +F               +  L + 
Sbjct: 502 ESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSS 561

Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
           A+LA+LE GMQ+H L+VK   D D  V NA +DMY KCG +                 WN
Sbjct: 562 ANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWN 621

Query: 515 AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
            +ISGY+ +G   E    F  M   G +P+ +TFV +LSACS+ GL+++G  Y+ SM   
Sbjct: 622 TLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKGMDYYNSMAPT 681

Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL 634
           +G+ P I+H   +V LLGR G   +A K I+ +P  P+ +IWR+LL +   H N++IGR 
Sbjct: 682 FGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSLLSSSRTHKNLDIGRK 741

Query: 635 SAQHILDFEPEDEATHVLLSNIYAMARSW---EKAAS--------KEPGLSWIENQGMVH 683
           +A+++L+ +P D++ +VLLSN+YA    W   +K  S        K P  SW++ +  V 
Sbjct: 742 AAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTIKLNKRPACSWLKLKNEVS 801

Query: 684 YFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLAL 743
            F  GD SH     I   L+ + +K R+ GY+ D S+ L D  E++KE  LW HSEKLAL
Sbjct: 802 TFGIGDRSHMHAEKIYVKLDEILLKLREVGYVADTSSALHDTDEEQKEHNLWNHSEKLAL 861

Query: 744 AFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGD 803
           A+ L  +P  S IRI KNLR+C DCH   K++S +  REI++RD +RFH F+ G CSC D
Sbjct: 862 AYGLLVVPEGSTIRIFKNLRVCADCHLVFKLVSMVFHREIVLRDPYRFHQFKHGSCSCSD 921

Query: 804 FW 805
           FW
Sbjct: 922 FW 923



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 143/564 (25%), Positives = 261/564 (46%), Gaps = 22/564 (3%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           IH    + G   +++    LL++Y     + +A +LF EMP+RN +S+   +   + +  
Sbjct: 66  IHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGC 125

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
             EA+  +  + +EG   N  A    + +  ++        V A V   G  ++  V  +
Sbjct: 126 MEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANS 185

Query: 198 LIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPN 241
           LI  F     V+ A ++FD +                  + + +     S MR    KP+
Sbjct: 186 LITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPD 245

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
             T   ++  C   D + +    H   + +     + +  AL+++Y+ +G++  A  +F 
Sbjct: 246 VTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFR 305

Query: 302 EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA-PNQFTFVSVLQACATMEGLD 360
            M ++DVI W+ MI+ Y Q++  ++A+E   ++ Q     PN  TF S L AC++ E L 
Sbjct: 306 NMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALM 365

Query: 361 LGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYV 420
            G  IH+++++  L + + + N+L+ +Y+KC  ME++  +F   P  + V+ N +  GY 
Sbjct: 366 NGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYA 425

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP-GMQVHCLTVKANYDMDV 479
            L +V  AM +FS M    +    +T  ++   C SL  L   GM +H    +     D 
Sbjct: 426 ALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDE 485

Query: 480 VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
            + N+LI MYA CG +  +  +F  +N+ + +SWNA+I+    HG   E +K+F   Q  
Sbjct: 486 YITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHA 545

Query: 540 GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEH-YTSMVSLLGRAGHLD 598
           G + +       LS+ +N   LE+G       V N G++ C  H   + + + G+ G +D
Sbjct: 546 GNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKN-GLD-CDSHVVNATMDMYGKCGKMD 603

Query: 599 KAAKLIEGIPFQPSVMIWRALLGA 622
              K +     +P+   W  L+  
Sbjct: 604 CMLKTLPDPAHRPT-QCWNTLISG 626



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 160/329 (48%), Gaps = 5/329 (1%)

Query: 303 MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC---ATMEGL 359
           MP +    W   ++  A+  L   A  L   MR+  V  + F   S++ AC      EG 
Sbjct: 1   MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60

Query: 360 DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGY 419
             G  IH+L  R GL+ +V++  AL+ +Y   G + N+  LF E P+RN V+W  ++V  
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVAL 120

Query: 420 VQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDV 479
              G + +A++ + +M +E V       ++V+  C +L     G+QV    V +     V
Sbjct: 121 SSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHV 180

Query: 480 VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
            VAN+LI M+     + DA  +FD M + + +SWNAMIS YS   + ++   V   M+  
Sbjct: 181 SVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHG 240

Query: 540 GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDK 599
             +P+  T   ++S C++  L+  G     S+  + G+   +    ++V++   AG LD+
Sbjct: 241 EVKPDVTTLCSLVSVCASSDLVALGSG-IHSLCVSSGLHCSVPLINALVNMYSTAGKLDE 299

Query: 600 AAKLIEGIPFQPSVMIWRALLGACIIHNN 628
           A  L   +  +  V+ W  ++ + +  N+
Sbjct: 300 AESLFRNMS-RRDVISWNTMISSYVQSNS 327


>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 760

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 245/722 (33%), Positives = 377/722 (52%), Gaps = 97/722 (13%)

Query: 181 ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN----------------DCFE 224
           A + K G  ++ ++   LI ++S   C   A  +   + +                  F 
Sbjct: 39  ARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAKLFS 98

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           +++  FS+M + G  P+      + K C  L   +  K  H  A  +  +MD +V  +L 
Sbjct: 99  QSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSLF 158

Query: 285 DLYTKSGEISNARRIFEEMPKKDVI----------------------------------- 309
            +Y + G + +AR++F+ M +KDV+                                   
Sbjct: 159 HMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIV 218

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
            W+ +++ + ++    +AV +F +M      P+Q T  SVL +    E L++G QIH  V
Sbjct: 219 SWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYV 278

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE-------------------------- 403
           ++ GLL D  V +A++D+Y K G +   ++LF E                          
Sbjct: 279 IKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKAL 338

Query: 404 ---------SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
                      + N V+W ++I G  Q G+  +A+ +F +M    V    VT  S+L AC
Sbjct: 339 EMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPAC 398

Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
            ++AAL  G   H   V+ +   DV V +ALIDMYAKCG I  +++VF+MM   N V WN
Sbjct: 399 GNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWN 458

Query: 515 AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
           ++++GYSMHG + EV+ +F+ + +   +P+ ++F  +LSAC   GL ++G  YF  M   
Sbjct: 459 SLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEE 518

Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL 634
           YGI+P +EHY+ MV+LLGRAG L +A  LI+ IPF+P   +W ALL +C + NNV++  +
Sbjct: 519 YGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNVDLAEI 578

Query: 635 SAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVH 683
           +AQ +   EPE+  T+VL+SNIYA    W +  S           K PG SWI+ +  V+
Sbjct: 579 AAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNKVY 638

Query: 684 YFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLAL 743
              A D SH  ++ I   ++ ++ + RK+G+ P+L   L+DV E E+E+ LW HSEKLA+
Sbjct: 639 TLLACDKSHPQIDQITEKMDEISEEMRKSGHRPNLDFALQDVEEQEQEQMLWGHSEKLAV 698

Query: 744 AFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGD 803
            F L   P  +P+++IKNLRIC DCH  IK IS    REI IRD +RFHHF+DG CSCGD
Sbjct: 699 VFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGD 758

Query: 804 FW 805
           FW
Sbjct: 759 FW 760



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 184/444 (41%), Gaps = 85/444 (19%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           ++H      + C +    +    IHC     G  +D F    L ++Y++  R+ DA K+F
Sbjct: 115 DTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVF 174

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D M E++ ++    + GY       E V + S + + G E N  ++   L      G+ +
Sbjct: 175 DRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHK 234

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMR 234
               +F  ++ LG                                               
Sbjct: 235 EAVIMFQKMHHLG----------------------------------------------- 247

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
              F P+  T + VL +    + + + +  HG  +K     D  V  A+LD+Y KSG + 
Sbjct: 248 ---FCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVY 304

Query: 295 NARRIFEEMP-----------------------------------KKDVIPWSFMIARYA 319
              ++F+E                                     + +V+ W+ +IA  A
Sbjct: 305 GIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCA 364

Query: 320 QTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVF 379
           Q    I+A+ELF  M+ A V PN+ T  S+L AC  +  L  G   H   VRV LL DV 
Sbjct: 365 QNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVH 424

Query: 380 VSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ 439
           V +AL+D+YAKCGR++ S  +F   P +N V WN+++ GY   G+  + M +F  ++  +
Sbjct: 425 VGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTR 484

Query: 440 VPATEVTYSSVLRACASLAALEPG 463
           +    ++++S+L AC  +   + G
Sbjct: 485 LKPDFISFTSLLSACGQVGLTDEG 508



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/437 (23%), Positives = 181/437 (41%), Gaps = 72/437 (16%)

Query: 264 AHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDL 323
           AH   LK+  + D Y++  L+  Y+     ++A  I + +P   V  +S +I    +  L
Sbjct: 37  AHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAKL 96

Query: 324 SIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNA 383
              ++ +F RM    + P+     ++ + CA +     G QIH +    GL  D FV  +
Sbjct: 97  FSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGS 156

Query: 384 LMDVYAKCGRM-------------------------------ENSVELFAESPKR----N 408
           L  +Y +CGRM                               E  V + +E  K     N
Sbjct: 157 LFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPN 216

Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHC 468
            V+WN ++ G+ + G   +A+IMF KM        +VT SSVL +      L  G Q+H 
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHG 276

Query: 469 LTVKANYDMDVVVANALIDMYAKCGSITDARLVFD---MMN------------------- 506
             +K     D  V +A++DMY K G +     +FD   MM                    
Sbjct: 277 YVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDK 336

Query: 507 -------------DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLS 553
                        + N VSW ++I+G + +G   E L++F  MQ  G +PN +T   +L 
Sbjct: 337 ALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLP 396

Query: 554 ACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSV 613
           AC N   L  G +     V  + ++  +   ++++ +  + G +  +  +   +P + ++
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVHLLDD-VHVGSALIDMYAKCGRIKMSQIVFNMMPTK-NL 454

Query: 614 MIWRALLGACIIHNNVE 630
           + W +L+    +H   +
Sbjct: 455 VCWNSLMNGYSMHGKAK 471



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 112/209 (53%), Gaps = 2/209 (0%)

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
           Q H+ +++ G  +D ++S  L+  Y+      ++  +    P     +++++I    +  
Sbjct: 36  QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAK 95

Query: 424 EVGKAMIMFSKMLEEQ-VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
              +++ +FS+M     +P T V   ++ + CA L+A + G Q+HC+   +  DMD  V 
Sbjct: 96  LFSQSIGVFSRMFSHGLIPDTHV-LPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQ 154

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
            +L  MY +CG + DAR VFD M++ + V+ +A++ GY+  G   EV+++   M++ G  
Sbjct: 155 GSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIE 214

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSM 571
           PN +++ G+LS  +  G  ++    F+ M
Sbjct: 215 PNIVSWNGILSGFNRSGYHKEAVIMFQKM 243


>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
          Length = 694

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 233/595 (39%), Positives = 344/595 (57%), Gaps = 13/595 (2%)

Query: 224 EEALNFFSQM--RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
           E+AL+ F +M   A     +  T A  LK+C  +  + V +     A+K     D +V  
Sbjct: 100 EDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAYAVKRGLVADRFVLS 159

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           +L+ +Y   G+++ AR +F+   +  V+ W+ ++A Y +    ++ VE+F  M +  VA 
Sbjct: 160 SLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAF 219

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           ++ T VSV+ AC  +    LG  +   V   GL  +  +  ALMD+YAKCG +  +  LF
Sbjct: 220 DEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLF 279

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
                R+ V W+ MI GY Q  +  +A+ +FS+M   +V   +VT  SVL ACA L ALE
Sbjct: 280 DGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALE 339

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
            G  VH    +    +  ++  AL+D YAKCG I DA   F+ M   N  +W A+I G +
Sbjct: 340 TGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMA 399

Query: 522 MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
            +G   E L++F  M++ G  P ++TF+GVL ACS+  L+E+G  +F SM  +YGI+P +
Sbjct: 400 TNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRV 459

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
           EHY  MV LLGRAG +D+A + I  +P +P+ +IWRALL +C +H NV IG  + + I+ 
Sbjct: 460 EHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQIIS 519

Query: 642 FEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDT 690
             P     +VLLSNIYA A  W+ AA            K PG S IE  G+V  F A D+
Sbjct: 520 LNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTPGCSLIELDGVVFEFFAEDS 579

Query: 691 SHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKM 750
            H ++  I   +E +  + + AGY+P+ + V  +V E EKE  +  HSEKLA+AF L K+
Sbjct: 580 DHPELREIYQKVEEMIGRIKVAGYVPNTADVRLEVEEREKEVSVSHHSEKLAIAFGLMKL 639

Query: 751 PPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            P + IR+ KNLR+C DCH+A K+ISK+  REI++RD + FHHF+DG CSC D+W
Sbjct: 640 DPGATIRLSKNLRVCADCHSATKLISKVYDREIVVRDRNIFHHFKDGTCSCNDYW 694



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 168/380 (44%), Gaps = 18/380 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           + H+ A +L+SC +   L     +    +K+G   D F  + L+++Y     +  A  +F
Sbjct: 119 DQHTAACALKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVF 178

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D   E   + +   +  Y  +  ++E V +F  +   G   +     + +     +G A+
Sbjct: 179 DAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAK 238

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN-------------- 220
           L   V   V + G   N  + TAL+D ++ CG +  AR++FDG+ +              
Sbjct: 239 LGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYT 298

Query: 221 --DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
             D   EAL  FS+M+    +PN+ T   VL AC  L  +   K  H    +    +   
Sbjct: 299 QADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTI 358

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           +  AL+D Y K G I +A   FE MP K+   W+ +I   A      +A+ELF  MR+A 
Sbjct: 359 LGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAG 418

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQ-IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
           + P   TF+ VL AC+    ++ G +   S+    G+   V     ++D+  + G ++ +
Sbjct: 419 IEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEA 478

Query: 398 VELFAESP-KRNHVTWNTMI 416
            +     P + N V W  ++
Sbjct: 479 YQFIRTMPIEPNAVIWRALL 498



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 84/379 (22%), Positives = 149/379 (39%), Gaps = 66/379 (17%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
           F+  +  + + +C +  D +    +   V ++G   +      L+++Y K   +  A +L
Sbjct: 219 FDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRL 278

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           FD M  R+ +++   I GYT + Q  EA+GLFS +     E N     + L     +G  
Sbjct: 279 FDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGAL 338

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL--------------- 218
           E    V + V +        +GTAL+D ++ CGC++ A + F+ +               
Sbjct: 339 ETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGM 398

Query: 219 -FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
             N    EAL  FS MR  G +P + TF  VL AC           +H C          
Sbjct: 399 ATNGRGREALELFSSMREAGIEPTDVTFIGVLMAC-----------SHSCL--------- 438

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMP-----KKDVIPWSFMIARYAQTDLSIDAVELFC 332
                          +   RR F+ M      K  V  +  M+    +  L  +A +   
Sbjct: 439 ---------------VEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQF-- 481

Query: 333 RMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD---VFVSNALMDVYA 389
            +R   + PN   + ++L +CA    + +G +    ++ +        V +SN    +YA
Sbjct: 482 -IRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSN----IYA 536

Query: 390 KCGRMENSVELFAESPKRN 408
             G+ +++  +  E   R 
Sbjct: 537 SAGQWKDAAMVRKEMKDRG 555



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 112/262 (42%), Gaps = 30/262 (11%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N  +  + L +C     L+T   +H  V +K   L       L++ Y K   + DA +
Sbjct: 319 EPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVE 378

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
            F+ MP +N+ ++   I+G   + +  EA+ LFS++   G  + P   T F+ VL++   
Sbjct: 379 AFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAG--IEPTDVT-FIGVLMA--- 432

Query: 173 AELCPCVFACVYKLGH---DSNAFVGTALIDAFSVCGCVEFARKVFDGLFN-DCFEEALN 228
                C  +C+ + G    DS A         + +   VE    + D L      +EA  
Sbjct: 433 -----CSHSCLVEEGRRHFDSMA-------RDYGIKPRVEHYGCMVDLLGRAGLVDEAYQ 480

Query: 229 FFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSA--HGCALKTCYEMDLYVAVALLDL 286
           F   +R +  +PN   +  +L +C     + + + A     +L   +  D    V L ++
Sbjct: 481 F---IRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDY---VLLSNI 534

Query: 287 YTKSGEISNARRIFEEMPKKDV 308
           Y  +G+  +A  + +EM  + +
Sbjct: 535 YASAGQWKDAAMVRKEMKDRGI 556


>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
          Length = 613

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 228/582 (39%), Positives = 338/582 (58%), Gaps = 26/582 (4%)

Query: 246 AFVLKACLGL-----------DTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
           +++LK C+ L             I      HG  L T  +M  Y+   LL   +    +S
Sbjct: 36  SYILKKCIALLLSCASSKFKFRQIHAFSIRHGVPL-TNPDMGKYLIFTLLSFCSP---MS 91

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
            A +IF ++   ++  W+ MI  YA+++  + A+EL+ +M  + + P+  T+  +L+A A
Sbjct: 92  YAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIA 151

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
            +  +  G ++HS+ +R G  S VFV N L+ +YA CG  E++ +LF    +RN VTWN+
Sbjct: 152 KLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNS 211

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
           +I GY   G   +A+ +F +M    V     T  S+L ACA L AL  G + H   VK  
Sbjct: 212 VINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVG 271

Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
            D ++   NAL+D+YAKCGSI  A  VFD M + + VSW ++I G +++G   E L++F 
Sbjct: 272 LDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFK 331

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
            ++++G  P+ +TFVGVL ACS+ G++++G  YFK M   YGI P IEHY  MV LLGRA
Sbjct: 332 ELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRA 391

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLS 654
           G + +A + I+ +P QP+ ++WR LLGAC IH ++ +G ++   +L  EP+    +VLLS
Sbjct: 392 GLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLS 451

Query: 655 NIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLE 703
           N+YA  + W            +   K PG S +E +  +H F  GD SH     I   L 
Sbjct: 452 NLYASEQRWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLA 511

Query: 704 WLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLR 763
            +    +  GY+P +S VL D+ E+EKE  L  HSEK+A+AF L       PIR++KNLR
Sbjct: 512 EITKLLKLEGYVPHISNVLADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLR 571

Query: 764 ICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +C DCH AIK+ISK+  REI++RD  RFHHF+DG CSC D+W
Sbjct: 572 VCADCHLAIKLISKVFDREIVVRDRSRFHHFKDGHCSCKDYW 613



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 179/355 (50%), Gaps = 21/355 (5%)

Query: 190 SNAFVGTALI-DAFSVCGCVEFARKVFDGLFN-DCFE---------------EALNFFSQ 232
           +N  +G  LI    S C  + +A ++F  + N + F                 AL  + Q
Sbjct: 71  TNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQ 130

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           M     +P+  T+ F+LKA   L  +R  +  H  A++  +E  ++V   L+ +Y   G 
Sbjct: 131 MHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGH 190

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
             +A ++FE M +++++ W+ +I  YA      +A+ LF  M    V P+ FT VS+L A
Sbjct: 191 AESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSA 250

Query: 353 CATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTW 412
           CA +  L LG + H  +V+VGL  ++   NAL+D+YAKCG +  + ++F E  +++ V+W
Sbjct: 251 CAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSW 310

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
            ++IVG    G   +A+ +F ++  + +  +E+T+  VL AC+    ++ G   +   +K
Sbjct: 311 TSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFD-YFKRMK 369

Query: 473 ANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHG 524
             Y +   + +   ++D+  + G +  A   + +M    N V W  ++   ++HG
Sbjct: 370 EEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHG 424



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 162/345 (46%), Gaps = 23/345 (6%)

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A ++F ++   N  ++ T I+GY  S   + A+ L+  +H    E +   +   LK +  
Sbjct: 93  AHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAK 152

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------- 218
           +        V +   + G +S  FV   L+  ++ CG  E A K+F+ +           
Sbjct: 153 LMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSV 212

Query: 219 -----FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY 273
                 N    EAL  F +M   G +P+ FT   +L AC  L  + + + AH   +K   
Sbjct: 213 INGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGL 272

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
           + +L+   ALLDLY K G I  A ++F+EM +K V+ W+ +I   A      +A+ELF  
Sbjct: 273 DGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKE 332

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVYAKCG 392
           + +  + P++ TFV VL AC+    +D G +    +    G++  +     ++D+  + G
Sbjct: 333 LERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAG 392

Query: 393 RMENSVELFAESP-KRNHVTWNTM-----IVGYVQLGEVGKAMIM 431
            ++ + E     P + N V W T+     I G++ LGEV +A ++
Sbjct: 393 LVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLL 437



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 30/288 (10%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E ++H+Y   L++  +  D++    +H   ++ G    +F  N L+++Y        A K
Sbjct: 137 EPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHK 196

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           LF+ M ERN +++ + I GY ++ +  EA+ LF  +   G E + F   + L     +G 
Sbjct: 197 LFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGA 256

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------G 217
             L       + K+G D N   G AL+D ++ CG +  A KVFD               G
Sbjct: 257 LALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVG 316

Query: 218 LFNDCF-EEALNFFSQMRAVGFKPNNFTFAFVLKACL-------GLDTIRVAKSAHGCAL 269
           L  + F +EAL  F ++   G  P+  TF  VL AC        G D  +  K  +G   
Sbjct: 317 LAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVP 376

Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
           K    ++ Y    ++DL  ++G +  A    + MP + + + W  ++ 
Sbjct: 377 K----IEHY--GCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLG 418


>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g15930-like [Cucumis
           sativus]
          Length = 744

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 230/658 (34%), Positives = 352/658 (53%), Gaps = 58/658 (8%)

Query: 206 GCVEFARKVFDGLFN----------------DCFEEALNFFSQMRAVGFKPNNFTFAFVL 249
           G  ++AR++FD +                  D  +  ++ + +M   G KP+ +TF F+ 
Sbjct: 87  GDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLF 146

Query: 250 KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
           K       +   +  HG  LK   + +++V  AL+ +Y   G++  AR +F+  PK DVI
Sbjct: 147 KGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVI 206

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
            W+ +I+ Y +     ++  LF  M    V P   T V VL AC+ ++ L  G ++HS V
Sbjct: 207 TWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYV 266

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAM 429
               + S++ + NA++D+YA CG M++++ +F     R+ ++W T++ G+  LGE+  A 
Sbjct: 267 KNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVAR 326

Query: 430 IMFSKMLEE-------------------------------QVPATEVTYSSVLRACASLA 458
             F KM E+                                V   E T  SVL ACA L 
Sbjct: 327 NYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLG 386

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           ALE G  +     +     D+ V NALIDMY KCG +  A  +F  M+  ++ +W AMI 
Sbjct: 387 ALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIV 446

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           G +++G   + L +F  M +    P+ +T++GVLSAC++ GL+++G  YF  M + +GIE
Sbjct: 447 GLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIE 506

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P I HY  +V LL RAG L +A ++IE +P + + ++W ALL  C ++   ++  +  + 
Sbjct: 507 PNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQ 566

Query: 639 ILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRA 687
           IL+ EP++ A +VLL NIYA  + W           +K   K PG S IE  G VH F A
Sbjct: 567 ILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVA 626

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFAL 747
           GD SH     I   L+ +    + AGY PD+S V  D+ E++KE  ++ HSEKLA+AF L
Sbjct: 627 GDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGL 686

Query: 748 FKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
              PP   IRI KNLR+C+DCH   K++SK+  RE+I+RD  RFHHF+ G CSC D+W
Sbjct: 687 INSPPGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 744



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 157/519 (30%), Positives = 239/519 (46%), Gaps = 62/519 (11%)

Query: 56  SHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYV------KLNRLPD 109
           +H   + L++C   D LQ    +HCQ +KKG    L A  VL N  +      +      
Sbjct: 39  THPLISLLETCESMDQLQQ---VHCQAIKKG----LNANPVLQNRVMTFCCTHEYGDFQY 91

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A +LFDE+PE N   + T I+GY+        V L+  + R G + + + F    K    
Sbjct: 92  ARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTR 151

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD------------- 216
               E    +   V K G   N FV TAL+  + +CG ++ AR VFD             
Sbjct: 152 DIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMI 211

Query: 217 -GLFNDC--FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY 273
              +N    FEE+   F  M      P   T   VL AC  L  +R  K  H        
Sbjct: 212 ISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKV 271

Query: 274 EMDLYVAVALLDLY-------------------------------TKSGEISNARRIFEE 302
           E +L +  A++D+Y                               T  GEI  AR  F++
Sbjct: 272 ESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDK 331

Query: 303 MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG 362
           MP+KD + W+ MI  Y +++   +A+ELF  M+   V P++FT VSVL ACA +  L+LG
Sbjct: 332 MPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELG 391

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
             I + + R  + +D+FV NAL+D+Y KCG ++ +  +F E  +R+  TW  MIVG    
Sbjct: 392 EWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVN 451

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHC-LTVKANYDMDVVV 481
           G   KA+ MFS ML+  +   E+TY  VL AC     ++ G +    +T +   + ++  
Sbjct: 452 GHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAH 511

Query: 482 ANALIDMYAKCGSITDARLVFDMMN-DWNEVSWNAMISG 519
              L+D+ A+ G + +A  V + M    N + W A+++G
Sbjct: 512 YGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAG 550



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 202/426 (47%), Gaps = 38/426 (8%)

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD--LYVAVALLDLYTKSGEISN 295
           F P       +L+ C  +D +   +  H  A+K     +  L   V       + G+   
Sbjct: 35  FSPPTHPLISLLETCESMDQL---QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQY 91

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACAT 355
           ARR+F+E+P+ ++  W+ MI  Y++ D     V L+  M +  V P+++TF  + +    
Sbjct: 92  ARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTR 151

Query: 356 MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTM 415
              L+ G Q+H  V++ GL  +VFV  AL+ +Y  CG+++ +  +F   PK + +TWN +
Sbjct: 152 DIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMI 211

Query: 416 IVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY 475
           I  Y ++G+  ++  +F  M ++QV  T VT   VL AC+ L  L  G +VH        
Sbjct: 212 ISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKV 271

Query: 476 DMDVVVANALIDMYAKC-------------------------------GSITDARLVFDM 504
           + ++V+ NA+IDMYA C                               G I  AR  FD 
Sbjct: 272 ESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDK 331

Query: 505 MNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG 564
           M + + VSW AMI GY       E L++F  MQ    +P+  T V VL+AC++ G LE G
Sbjct: 332 MPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELG 391

Query: 565 EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACI 624
           E + ++ +    I+  +    +++ +  + G +DKA  +   +  Q     W A++    
Sbjct: 392 E-WIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMS-QRDKFTWTAMIVGLA 449

Query: 625 IHNNVE 630
           ++ + E
Sbjct: 450 VNGHGE 455


>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Cucumis sativus]
          Length = 723

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 230/658 (34%), Positives = 352/658 (53%), Gaps = 58/658 (8%)

Query: 206 GCVEFARKVFDGLFN----------------DCFEEALNFFSQMRAVGFKPNNFTFAFVL 249
           G  ++AR++FD +                  D  +  ++ + +M   G KP+ +TF F+ 
Sbjct: 66  GDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLF 125

Query: 250 KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
           K       +   +  HG  LK   + +++V  AL+ +Y   G++  AR +F+  PK DVI
Sbjct: 126 KGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVI 185

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
            W+ +I+ Y +     ++  LF  M    V P   T V VL AC+ ++ L  G ++HS V
Sbjct: 186 TWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYV 245

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAM 429
               + S++ + NA++D+YA CG M++++ +F     R+ ++W T++ G+  LGE+  A 
Sbjct: 246 KNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVAR 305

Query: 430 IMFSKMLEE-------------------------------QVPATEVTYSSVLRACASLA 458
             F KM E+                                V   E T  SVL ACA L 
Sbjct: 306 NYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLG 365

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           ALE G  +     +     D+ V NALIDMY KCG +  A  +F  M+  ++ +W AMI 
Sbjct: 366 ALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIV 425

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           G +++G   + L +F  M +    P+ +T++GVLSAC++ GL+++G  YF  M + +GIE
Sbjct: 426 GLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIE 485

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P I HY  +V LL RAG L +A ++IE +P + + ++W ALL  C ++   ++  +  + 
Sbjct: 486 PNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQ 545

Query: 639 ILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRA 687
           IL+ EP++ A +VLL NIYA  + W           +K   K PG S IE  G VH F A
Sbjct: 546 ILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVA 605

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFAL 747
           GD SH     I   L+ +    + AGY PD+S V  D+ E++KE  ++ HSEKLA+AF L
Sbjct: 606 GDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGL 665

Query: 748 FKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
              PP   IRI KNLR+C+DCH   K++SK+  RE+I+RD  RFHHF+ G CSC D+W
Sbjct: 666 INSPPGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 723



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 157/519 (30%), Positives = 239/519 (46%), Gaps = 62/519 (11%)

Query: 56  SHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYV------KLNRLPD 109
           +H   + L++C   D LQ    +HCQ +KKG    L A  VL N  +      +      
Sbjct: 18  THPLISLLETCESMDQLQQ---VHCQAIKKG----LNANPVLQNRVMTFCCTHEYGDFQY 70

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A +LFDE+PE N   + T I+GY+        V L+  + R G + + + F    K    
Sbjct: 71  ARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTR 130

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD------------- 216
               E    +   V K G   N FV TAL+  + +CG ++ AR VFD             
Sbjct: 131 DIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMI 190

Query: 217 -GLFNDC--FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY 273
              +N    FEE+   F  M      P   T   VL AC  L  +R  K  H        
Sbjct: 191 ISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKV 250

Query: 274 EMDLYVAVALLDLY-------------------------------TKSGEISNARRIFEE 302
           E +L +  A++D+Y                               T  GEI  AR  F++
Sbjct: 251 ESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDK 310

Query: 303 MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG 362
           MP+KD + W+ MI  Y +++   +A+ELF  M+   V P++FT VSVL ACA +  L+LG
Sbjct: 311 MPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELG 370

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
             I + + R  + +D+FV NAL+D+Y KCG ++ +  +F E  +R+  TW  MIVG    
Sbjct: 371 EWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVN 430

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHC-LTVKANYDMDVVV 481
           G   KA+ MFS ML+  +   E+TY  VL AC     ++ G +    +T +   + ++  
Sbjct: 431 GHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAH 490

Query: 482 ANALIDMYAKCGSITDARLVFDMMN-DWNEVSWNAMISG 519
              L+D+ A+ G + +A  V + M    N + W A+++G
Sbjct: 491 YGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAG 529


>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 219/578 (37%), Positives = 347/578 (60%), Gaps = 12/578 (2%)

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           P+ FTF  +LK C  L   +V K  HG  +K     DLY+   LL++Y   G++ +AR +
Sbjct: 77  PDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFL 136

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL 359
           FE M  ++ + W+ MI+ Y +     +A+ L+ +M +   +P++ T  +++ ACA ++ L
Sbjct: 137 FERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDL 196

Query: 360 DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGY 419
            +G ++HS +  + +     + +AL+++YAKCG ++ + ++F +   ++   W+ +I GY
Sbjct: 197 GVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGY 256

Query: 420 VQLGEVGKAMIMFSKMLE-EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           V+     +A+ +F ++     +   EVT  +V+ ACA L  LE G  VH    +      
Sbjct: 257 VKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHS 316

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
           V + N+LIDM++KCG I  A+ +FD M+  + +SWN+M++G+++HGL  E L  F LMQ 
Sbjct: 317 VSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQT 376

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLD 598
              +P+ +TF+GVL+ACS+ GL+++G+  F  + A YG+    EHY  MV LL RAG L 
Sbjct: 377 TDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLA 436

Query: 599 KAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYA 658
           +A + I  +P QP   IW ++LGAC ++NN+E+G  +A+ +L  EP ++  ++LLSNIYA
Sbjct: 437 EAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYA 496

Query: 659 MARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNM 707
             + W           EK   K PG S +    + H F AGD SH ++  I  ML  +  
Sbjct: 497 KRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVRE 556

Query: 708 KSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVD 767
           K + AGY+ D S VL ++ +++KE  +  HSEKLAL + L K      I I+KNLR+C D
Sbjct: 557 KLKLAGYVADTSEVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSD 616

Query: 768 CHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           CHT IK++SKI QR+I +RD +RFHHF+DG CSC D+W
Sbjct: 617 CHTLIKLVSKIYQRQITLRDRNRFHHFKDGSCSCRDYW 654



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 195/363 (53%), Gaps = 7/363 (1%)

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQ 351
           +  A  +F    + DV+ W+ M+  +  +++   A++ +  M  ++   P++FTF S+L+
Sbjct: 28  VGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLK 87

Query: 352 ACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
            CA +    +G  +H  VV+  L SD+++   L+++YA CG ++++  LF     RN V 
Sbjct: 88  GCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVV 147

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
           W +MI GY++     +A++++ KM E+     EVT ++++ ACA L  L  GM++H    
Sbjct: 148 WTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIR 207

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
           + +  +  V+ +AL++MYAKCG +  AR VFD ++D +  +W+A+I GY  +  S E L+
Sbjct: 208 EMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQ 267

Query: 532 VF-DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSL 590
           +F ++      RPN +T + V+SAC+  G LE G  +    +        +    S++ +
Sbjct: 268 LFREVAGGSNMRPNEVTILAVISACAQLGDLETGR-WVHDYITRTQKGHSVSLNNSLIDM 326

Query: 591 LGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH--NNVEIGRLSAQHILDFEPEDEA 648
             + G +D A ++ + + ++  ++ W +++    +H      + +       D +P DE 
Sbjct: 327 FSKCGDIDAAKRIFDSMSYK-DLISWNSMVNGFALHGLGREALAQFRLMQTTDLQP-DEI 384

Query: 649 THV 651
           T +
Sbjct: 385 TFI 387



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/420 (23%), Positives = 206/420 (49%), Gaps = 29/420 (6%)

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFST-LHREGHELNPFAFTAFLKVLV 168
           A  +F    E + +++ + ++ +  S+    A+  ++  L R  +  + F F + LK   
Sbjct: 31  AYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90

Query: 169 SMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------- 219
            +   ++   +   V K    S+ ++ T L++ ++ CG ++ AR +F+ +          
Sbjct: 91  LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150

Query: 220 -------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC 272
                  N C  EAL  + +M   GF P+  T A ++ AC  L  + V    H       
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHS----HI 206

Query: 273 YEMDLYV----AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAV 328
            EMD+ +      AL+++Y K G++  AR++F+++  KDV  WS +I  Y + + S +A+
Sbjct: 207 REMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEAL 266

Query: 329 ELFCRMRQAF-VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDV 387
           +LF  +     + PN+ T ++V+ ACA +  L+ G  +H  + R      V ++N+L+D+
Sbjct: 267 QLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDM 326

Query: 388 YAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTY 447
           ++KCG ++ +  +F     ++ ++WN+M+ G+   G   +A+  F  M    +   E+T+
Sbjct: 327 FSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITF 386

Query: 448 SSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDARLVFDMM 505
             VL AC+    ++ G ++    ++A Y + +   +   ++D+  + G + +AR    +M
Sbjct: 387 IGVLTACSHAGLVQEGKKLF-YEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVM 445



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 103/426 (24%), Positives = 189/426 (44%), Gaps = 35/426 (8%)

Query: 15  LTHQSKINAWLRGLSAQAALS--TQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDL 72
           LT  S + A++     + AL   T+    S   P  F+        + + L+ C    + 
Sbjct: 44  LTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFT--------FPSLLKGCALLLEF 95

Query: 73  QTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGY 132
           +    +H QV+K     DL+    LLN+Y     L  A  LF+ M  RN + + + I GY
Sbjct: 96  KVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGY 155

Query: 133 TVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNA 192
             +    EA+ L+  +  +G   +       +     +    +   + + + ++     A
Sbjct: 156 MKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICA 215

Query: 193 FVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMR-A 235
            +G+AL++ ++ CG ++ AR+VFD L                 N+   EAL  F ++   
Sbjct: 216 VLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGG 275

Query: 236 VGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISN 295
              +PN  T   V+ AC  L  +   +  H    +T     + +  +L+D+++K G+I  
Sbjct: 276 SNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDA 335

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA- 354
           A+RIF+ M  KD+I W+ M+  +A   L  +A+  F  M+   + P++ TF+ VL AC+ 
Sbjct: 336 AKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSH 395

Query: 355 ---TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHV 410
                EG  L  +I +L   V L S+ +    ++D+  + G +  + E     P + +  
Sbjct: 396 AGLVQEGKKLFYEIEAL-YGVRLKSEHY--GCMVDLLCRAGLLAEAREFIRVMPLQPDGA 452

Query: 411 TWNTMI 416
            W +M+
Sbjct: 453 IWGSML 458


>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic [Vitis vinifera]
 gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
          Length = 880

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 258/817 (31%), Positives = 421/817 (51%), Gaps = 49/817 (5%)

Query: 21  INAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHC 80
           + +W   +SA   +   + +      +  S    N  + +T+L+SC    +         
Sbjct: 81  VASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQA 140

Query: 81  QVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVE 140
            V K G   +    + L++ Y K     +A ++F+ M   + +S+   +  +  +  + +
Sbjct: 141 LVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQ 200

Query: 141 AVGLFSTLHREGHELNPFAFTAFLKV--LVSMGWAELCPCVFACVYKLGHDSNAFVGTAL 198
           A+ L+  + + G   N F F   L     + + + +L   V A +     + N  + TAL
Sbjct: 201 ALQLYHRMIQTGVAPNEFTFVKLLAASSFLGLNYGKL---VHAHLMMWRIELNLVLKTAL 257

Query: 199 IDAFSVCGCVEFARKV---------------FDGLFNDC-FEEALNFFSQMRAVGFKPNN 242
           +D +  C  +E A KV                 G      F EA+  F +M   G  PNN
Sbjct: 258 VDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNN 317

Query: 243 FTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK-SGEISNARRIFE 301
           FT++ +L AC  +  + + K  H   +    E D+ V  +L+D+Y K S  I +A R F 
Sbjct: 318 FTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFR 377

Query: 302 EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL 361
            +   +VI W+ +IA +++  L  +++++F  M+   V PN FT  ++L AC T++ L  
Sbjct: 378 GIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQ 437

Query: 362 GNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQ 421
             ++H  +++    +DV V NAL+D YA  G ++++  + +    R+ +T+ ++     Q
Sbjct: 438 TRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQ 497

Query: 422 LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVV 481
            G    A+ + + M ++ V     + +S L A A +  +E G Q+HC +VK+     + V
Sbjct: 498 TGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHCYSVKSGLGSWISV 557

Query: 482 ANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW 541
           +N L+D+Y KCG I DA   F  + + + VSWN +I G + +G  +  L  F+ M+  G 
Sbjct: 558 SNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGV 617

Query: 542 RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAA 601
            P+ +T + VL ACS+GGL++ G  YF+SM   +GI P ++HY  +V LLGRAG L++A 
Sbjct: 618 EPDQITCLLVLYACSHGGLVDMGLDYFQSMREKHGIRPQLDHYVCLVDLLGRAGRLEEAM 677

Query: 602 KLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIY---- 657
            +IE +PF+P  +I++ LLGAC +H N+ +G   A+  L+ +P D A +VLL+N+Y    
Sbjct: 678 NVIETMPFKPDALIYKTLLGACKLHGNIPLGEHMARQGLELDPSDPAFYVLLANLYDDSG 737

Query: 658 ---------AMARSWEKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMK 708
                     M R  E+   K PG SW+E + MVH F AGDTSH  +  I   +E L  +
Sbjct: 738 RSELGEKTRRMMR--ERGVRKNPGQSWMEERNMVHLFTAGDTSHPQIGKIHEKIESLIAQ 795

Query: 709 SRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDC 768
            R  G               ++ R L  HSEKLA+AF L   PP +PIRIIKN+RIC DC
Sbjct: 796 FRNQGIWY------------QENRALAHHSEKLAVAFGLISTPPKAPIRIIKNIRICRDC 843

Query: 769 HTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           H  I  ++++V REII+RD +RFH F+ G CSC  +W
Sbjct: 844 HDFIMNVTRLVDREIIVRDGNRFHSFKKGECSCRGYW 880



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 170/568 (29%), Positives = 280/568 (49%), Gaps = 24/568 (4%)

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
           ++  + IH  ++K G   D+F +N LL++Y K   + +A +LFDEMP R+  S+   +  
Sbjct: 31  VRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLMSA 90

Query: 132 YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSN 191
           Y       EA+ LF ++   G   N F  +  L+   ++          A V K G DSN
Sbjct: 91  YGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSN 150

Query: 192 AFVGTALIDAFSVCGCVEFARKVFDGLFN----------------DCFEEALNFFSQMRA 235
             +G+ALID +S CGC + A +VF+ + N                  + +AL  + +M  
Sbjct: 151 PVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQ 210

Query: 236 VGFKPNNFTFAFVLKAC--LGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
            G  PN FTF  +L A   LGL+     K  H   +    E++L +  AL+D+Y K   I
Sbjct: 211 TGVAPNEFTFVKLLAASSFLGLN---YGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSI 267

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
            +A ++ +   + DV  W+ +I+ + Q+    +A+  F  M  + V PN FT+  +L AC
Sbjct: 268 EDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNAC 327

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM-ENSVELFAESPKRNHVTW 412
           +++  LDLG QIHS VV  GL +DV V N+L+D+Y KC  M E++V  F      N ++W
Sbjct: 328 SSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISW 387

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
            ++I G+ + G   +++ +F  M    V     T S++L AC ++ +L    ++H   +K
Sbjct: 388 TSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIK 447

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
            N D DVVV NAL+D YA  G + DA  V  MM   + +++ ++ +  +  G     L +
Sbjct: 448 NNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNI 507

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
              M +   R +  +    LSA +   ++E G+      V + G+   I     +V L G
Sbjct: 508 ITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHCYSVKS-GLGSWISVSNGLVDLYG 566

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALL 620
           + G +  A +    I  +P  + W  L+
Sbjct: 567 KCGCIHDAHRSFLEIT-EPDAVSWNGLI 593



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 197/367 (53%), Gaps = 4/367 (1%)

Query: 257 TIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIA 316
           ++R     H   +K  ++ D++++  LL LY K   ++ AR++F+EMP +DV  W+ +++
Sbjct: 30  SVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLMS 89

Query: 317 RYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLS 376
            Y +     +A+ELF  M  +   PN+FT  + L++C+ +   + G +  +LV + G  S
Sbjct: 90  AYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDS 149

Query: 377 DVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML 436
           +  + +AL+D Y+KCG  + +  +F      + V+W  M+  +V+ G   +A+ ++ +M+
Sbjct: 150 NPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMI 209

Query: 437 EEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSIT 496
           +  V   E T+  +L A +S   L  G  VH   +    ++++V+  AL+DMY KC SI 
Sbjct: 210 QTGVAPNEFTFVKLL-AASSFLGLNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIE 268

Query: 497 DARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS 556
           DA  V  +  +++   W A+ISG++      E +  F  M+  G  PNN T+ G+L+ACS
Sbjct: 269 DAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACS 328

Query: 557 NGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHL-DKAAKLIEGIPFQPSVMI 615
           +   L+ G+    S V   G+E  +    S+V +  +  ++ + A +   GI   P+V+ 
Sbjct: 329 SILALDLGKQ-IHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIA-SPNVIS 386

Query: 616 WRALLGA 622
           W +L+  
Sbjct: 387 WTSLIAG 393


>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
          Length = 681

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 214/578 (37%), Positives = 339/578 (58%), Gaps = 12/578 (2%)

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
           +P++ TF   L AC  L  +R  +S    A    Y+ D++V  +LL LY + G + +A +
Sbjct: 105 RPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVK 164

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           +F+ MP++D + WS M+A +      +DA++++ RMR+  V  ++   + V+QAC     
Sbjct: 165 VFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARN 224

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           + +G  +H  ++R G+  DV  + +L+D+YAK G ++ +  +F     RN V+W+ MI G
Sbjct: 225 VRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISG 284

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           + Q G+  +A+ +F  M    +        S L AC+++  L+ G  VH   V+  +D +
Sbjct: 285 FAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVR-RFDFN 343

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
            ++  A IDMY+KCGS+  A+++F+M++D + + WNAMI+    HG   + L +F  M +
Sbjct: 344 CILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNE 403

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLD 598
            G RP++ TF  +LSA S+ GL+E+G+ +F  MV ++ I P  +HY  +V LL R+G ++
Sbjct: 404 TGMRPDHATFASLLSALSHSGLVEEGKLWFGCMVNHFKITPAEKHYVCLVDLLARSGLVE 463

Query: 599 KAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYA 658
           +A+ L+  +  +P+V IW ALL  C+ +  +E+G   A +IL+ +P+D     L+SN+YA
Sbjct: 464 EASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYA 523

Query: 659 MARSWEK-----------AASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNM 707
             + W+K            + K PG S IE +G  H F   D SH     I   +  L++
Sbjct: 524 ATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHAFLMEDQSHPQREEIVSKVAKLDL 583

Query: 708 KSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVD 767
           + RK GYIP    V  D+ E+ KE+ L  HSEKLA+AF L    P + + IIKNLR+C D
Sbjct: 584 EMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSEKLAIAFGLLNTGPGTRLVIIKNLRVCGD 643

Query: 768 CHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           CH AIK ISKI  REI++RD  RFHHF+DG CSC D+W
Sbjct: 644 CHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 174/378 (46%), Gaps = 19/378 (5%)

Query: 160 FTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL- 218
           FT  L     +G       V    +  G+  + FV ++L+  ++  G +  A KVFD + 
Sbjct: 111 FTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVFDRMP 170

Query: 219 -------------FNDCFE--EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKS 263
                        F    +  +A+  + +MR  G K +      V++AC     +R+  S
Sbjct: 171 RRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMGAS 230

Query: 264 AHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDL 323
            HG  L+    MD+  A +L+D+Y K+G +  A R+F  M  ++ + WS MI+ +AQ   
Sbjct: 231 VHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQ 290

Query: 324 SIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNA 383
           S +A+ LF  M+ + + P+    VS L AC+ +  L LG  +H  +VR     +  +  A
Sbjct: 291 SDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR-FDFNCILGTA 349

Query: 384 LMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPAT 443
            +D+Y+KCG + ++  LF     R+ + WN MI      G    A+ +F +M E  +   
Sbjct: 350 AIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPD 409

Query: 444 EVTYSSVLRACASLAALEPG-MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVF 502
             T++S+L A +    +E G +   C+               L+D+ A+ G + +A  + 
Sbjct: 410 HATFASLLSALSHSGLVEEGKLWFGCMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLL 469

Query: 503 DMMNDWNEVS-WNAMISG 519
             M     V+ W A++SG
Sbjct: 470 TSMKAEPTVAIWVALLSG 487



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/315 (23%), Positives = 154/315 (48%), Gaps = 19/315 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +S ++  +L +C +  DL+   ++  +    G   D+F  + LL++Y +   + DA K+F
Sbjct: 107 DSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVF 166

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D MP R+ +++ T + G+  + Q ++A+ ++  +  +G + +       ++   +     
Sbjct: 167 DRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVR 226

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
           +   V   + + G   +    T+L+D ++  G ++ A +VF GL                
Sbjct: 227 MGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVF-GLMVHRNDVSWSAMISGF 285

Query: 220 --NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
             N   +EAL  F  M+A G +P++      L AC  +  +++ +S HG  ++  ++ + 
Sbjct: 286 AQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR-FDFNC 344

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
            +  A +D+Y+K G +++A+ +F  +  +D+I W+ MIA         DA+ LF  M + 
Sbjct: 345 ILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNET 404

Query: 338 FVAPNQFTFVSVLQA 352
            + P+  TF S+L A
Sbjct: 405 GMRPDHATFASLLSA 419


>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Vitis vinifera]
          Length = 872

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 259/781 (33%), Positives = 399/781 (51%), Gaps = 40/781 (5%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +Y   L+ C           +H  V K    L +   N LL+++V+   L +A  +F +M
Sbjct: 96  TYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKM 155

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
            ER+  S+   + GY  +  F EA+ L+  +   G   + + F   L+    +       
Sbjct: 156 AERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGR 215

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GLF-ND 221
            V   V + G +S+  V  ALI  +  CG +  AR VFD               G F ND
Sbjct: 216 EVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFEND 275

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
              E L  F  MR     P+  T   V+ AC  L   R+ +  HG  +KT +  ++ V  
Sbjct: 276 VCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNN 335

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           +L+ +++  G    A  +F +M  KD++ W+ MI+ Y +  L   AVE +  M    V P
Sbjct: 336 SLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVP 395

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           ++ T  SVL ACA +  LD G  +H    R GL S V V+N+L+D+Y+KC  ++ ++E+F
Sbjct: 396 DEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVF 455

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
              P +N ++W ++I+G        +A+  F +M+    P + VT  SVL ACA + AL 
Sbjct: 456 HRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILSLKPNS-VTLVSVLSACARIGALS 514

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
            G ++H   ++     D  + NAL+DMY +CG +  A   F+     +  SWN +++GY+
Sbjct: 515 CGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCEK-DVASWNILLTGYA 573

Query: 522 MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
             G     +++F  M +    P+ +TF  +L ACS  G++  G  YF+SM   + I P +
Sbjct: 574 QQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNL 633

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
           +HY S+V LLGRAG L+ A + I+ +P  P   IW ALL AC I+ NVE+G L+AQHI +
Sbjct: 634 KHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFE 693

Query: 642 FEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDT 690
            + +    ++LL N+YA +  W++ A           + +PG SW+E  G VH F  GD 
Sbjct: 694 MDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDD 753

Query: 691 SHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDE----KERYLWVHSEKLALAFA 746
            H  +  I  +LE    K    G      ++ +D R D+    K      HSE+LA+AF 
Sbjct: 754 FHPQIKEINAVLEGFYEKMEATGL-----SMSKDSRRDDIDASKAEIFCGHSERLAIAFG 808

Query: 747 LFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGD--F 804
           L    P +PI + KNL +C +CH  +K ISK+V+R I +RD  +FHHF+DG CSCGD  +
Sbjct: 809 LINTVPGTPIWVTKNLYMCENCHNTVKFISKVVRRGISVRDTEQFHHFKDGVCSCGDEGY 868

Query: 805 W 805
           W
Sbjct: 869 W 869



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 129/449 (28%), Positives = 224/449 (49%), Gaps = 6/449 (1%)

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
            E+AL     M+ +       T+  +L+ C            H    KT   + + +  A
Sbjct: 75  LEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNA 134

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           LL ++ + G++  A  +F +M ++D+  W+ ++  YA+     +A+ L+ RM    + P+
Sbjct: 135 LLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPD 194

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
            +TF  VL+ C  +  L  G ++H  V+R G  SDV V NAL+ +Y KCG + ++  +F 
Sbjct: 195 VYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFD 254

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
             P+R+ ++WN MI GY +     + + +F  M E  V    +T +SV+ AC +L     
Sbjct: 255 RMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERL 314

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G +VH   +K  +  +V V N+LI M++  G   +A +VF  M   + VSW AMISGY  
Sbjct: 315 GREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEK 374

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
           +GL  + ++ + +M+  G  P+ +T   VLSAC+  GLL++G           G+   + 
Sbjct: 375 NGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKG-IMLHEFADRTGLTSYVI 433

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRA-LLGACIIHNNVEIGRLSAQHILD 641
              S++ +  +   +DKA ++   IP   +V+ W + +LG  + + + E      Q IL 
Sbjct: 434 VANSLIDMYSKCRCIDKALEVFHRIP-NKNVISWTSIILGLRLNYRSFEALFFFQQMILS 492

Query: 642 FEPEDEATHVLLSNIYAMARSWEKAASKE 670
            +P    +  L+S + A AR    +  KE
Sbjct: 493 LKPN---SVTLVSVLSACARIGALSCGKE 518



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 140/480 (29%), Positives = 233/480 (48%), Gaps = 20/480 (4%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
           +++   L++C    DL     +H  V++ G   D+   N L+ +YVK   +  A  +FD 
Sbjct: 196 YTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDR 255

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
           MP R+ IS+   I GY  +   +E + LF  +     + +    T+ +    ++G   L 
Sbjct: 256 MPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLG 315

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-FNDCF------------ 223
             V   V K G  +   V  +LI   S  GC + A  VF  + F D              
Sbjct: 316 REVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKN 375

Query: 224 ---EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
              E+A+  ++ M   G  P+  T A VL AC GL  +      H  A +T     + VA
Sbjct: 376 GLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVA 435

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
            +L+D+Y+K   I  A  +F  +P K+VI W+ +I        S +A+  F +M  + + 
Sbjct: 436 NSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS-LK 494

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           PN  T VSVL ACA +  L  G +IH+  +R GL  D F+ NAL+D+Y +CGRME +   
Sbjct: 495 PNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQ 554

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F  S +++  +WN ++ GY Q G+ G A+ +F KM+E  V   E+T++S+L AC+    +
Sbjct: 555 F-NSCEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMV 613

Query: 461 EPGMQ-VHCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMIS 518
             G++    +  K +   ++    +++D+  + G + DA   +  M  D +   W A+++
Sbjct: 614 TDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLN 673



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 2/210 (0%)

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
           N++I+     G++ KA+I    M E QV   E TY ++LR C    A   G +VH    K
Sbjct: 63  NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
               + V + NAL+ M+ + G + +A  VF  M + +  SWN ++ GY+  G   E L +
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
           +  M   G RP+  TF  VL  C     L +G      ++  YG E  ++   +++++  
Sbjct: 183 YHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVI-RYGFESDVDVVNALITMYV 241

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           + G +  A  + + +P +  +  W A++  
Sbjct: 242 KCGDIFSARLVFDRMPRRDRIS-WNAMISG 270



 Score = 46.2 bits (108), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 100/255 (39%), Gaps = 30/255 (11%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           NS +  + L +C +   L     IH   L+ G   D F  N LL++YV+  R+  A   F
Sbjct: 496 NSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQF 555

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           +   E++  S+   + GY    +   AV LF  +       +   FT+            
Sbjct: 556 NSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSL----------- 603

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDC-FEEALNFFSQM 233
           LC C  + +   G +       ++   F +   ++    V D L      E+A  F  +M
Sbjct: 604 LCACSRSGMVTDGLE----YFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKM 659

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD---LYVAVALLDLYTKS 290
                 P+   +  +L AC     + + +     A +  +EMD   +   + L +LY  S
Sbjct: 660 P---IDPDPAIWGALLNACRIYQNVELGE----LAAQHIFEMDTKSVGYYILLCNLYADS 712

Query: 291 G---EISNARRIFEE 302
           G   E++  R+I  E
Sbjct: 713 GKWDEVARVRKIMRE 727


>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 660

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 245/644 (38%), Positives = 352/644 (54%), Gaps = 65/644 (10%)

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMR 234
           N  VG  L+  ++ CG    AR +FD +                 N  +++AL  +  M 
Sbjct: 53  NPSVGIKLMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMY 112

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
             GF P+ +T+  VLKA    D++ V    HG  LK   +++LYV   L+ +Y K   + 
Sbjct: 113 TQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLK 172

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
            A+++ +E+P +DV+ W+ M++ YAQ     DA+EL   M    + PN  T  S+L A  
Sbjct: 173 EAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPA-- 230

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMD--VYAKCGRMENSVELFAESPKRNHVTW 412
                                    V+N   D  +Y K        E+F +  K++ ++W
Sbjct: 231 -------------------------VTNTTSDNVLYVK--------EMFLKLTKKSVISW 257

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
           N MI  YV      +A++++S+M    V    V+  SVL A   L+AL  G +VH    +
Sbjct: 258 NVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAER 317

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
                ++++ NALIDMYAKCG + DAR VF+ M   + VSW ++IS Y   G   + + V
Sbjct: 318 KKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAV 377

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
           F  M+  G  P+++ FV VL+ACS+ GLL+ G  YF +++A  GI P +EH+  +V LLG
Sbjct: 378 FAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYF-NLMAECGITPKLEHFACVVDLLG 436

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVL 652
           RAG +D+A   I  +P +P   +W  LL AC +++N+ IG L+A  +L   PE    +VL
Sbjct: 437 RAGKIDEAYGFIRQMPLEPDERVWGPLLSACRVYSNMNIGILAADKLLMLNPEHSGYYVL 496

Query: 653 LSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGM 701
           LSNIYA A  W            K   K PG+S +E    VH F AGD SH     I   
Sbjct: 497 LSNIYAKAGRWADVAAIRSIMERKGIKKLPGISNVELNDGVHTFLAGDHSHPQSKKIYEE 556

Query: 702 LEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKN 761
           L+ L  K ++ GY+P+  + L DV E++KE +L VHSEKLA+AFA+    P +PIR+ KN
Sbjct: 557 LDVLVGKMKELGYMPETDSALHDVEEEDKEYHLAVHSEKLAVAFAIINTKPGTPIRVTKN 616

Query: 762 LRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           LR+C DCH A K+ISKI +REIIIRD HRFHHFQ+GCCSCGD+W
Sbjct: 617 LRVCGDCHVAAKLISKIAEREIIIRDTHRFHHFQEGCCSCGDYW 660



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/470 (24%), Positives = 204/470 (43%), Gaps = 51/470 (10%)

Query: 68  QNDDLQTAMTIHCQVLKKGNCLDLFATNV-LLNVYVKLNRLPDATKLFDEMPERNTISFV 126
           Q  D+ T   +H +VL         +  + L+ VY        A  +FDE+ ++N + F 
Sbjct: 30  QYPDINTLKKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEITDKNVVFFN 89

Query: 127 TTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKL 186
             I+ Y  +  + +A+ ++ T++ +G   + + +   LK         +   +   V K+
Sbjct: 90  VMIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKI 149

Query: 187 GHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFF 230
           G D N +VG  LI  +  C  ++ A++V D +                 N  F +AL   
Sbjct: 150 GLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELC 209

Query: 231 SQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKS 290
            +M A+  KPN+ T A +L A                                    T S
Sbjct: 210 REMEALNLKPNDCTMASLLPAVTN---------------------------------TTS 236

Query: 291 GEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVL 350
             +   + +F ++ KK VI W+ MIA Y    +  +AV L+ +M    V P+  + VSVL
Sbjct: 237 DNVLYVKEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVL 296

Query: 351 QACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHV 410
            A   +  L LG ++H    R  LL ++ + NAL+D+YAKCG + ++  +F +   R+ V
Sbjct: 297 PAYGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVV 356

Query: 411 TWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLT 470
           +W ++I  Y + G+   A+ +F++M    +    + + SVL AC+    L+ G     L 
Sbjct: 357 SWTSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLM 416

Query: 471 VKANYDMDVVVANALIDMYAKCGSITDAR-LVFDMMNDWNEVSWNAMISG 519
            +      +     ++D+  + G I +A   +  M  + +E  W  ++S 
Sbjct: 417 AECGITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSA 466



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 90/361 (24%), Positives = 167/361 (46%), Gaps = 18/361 (4%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
           ++Y   L++  ++D L   + IH  VLK G  L+L+  N L+ +Y K   L +A ++ DE
Sbjct: 121 YTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDE 180

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
           +P R+ +S+ + +  Y  + +F +A+ L   +  E   L P   T           A L 
Sbjct: 181 IPCRDVVSWNSMVSVYAQNGRFNDALELCREM--EALNLKPNDCTM----------ASLL 228

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAV 236
           P V           N      +    +    + +   +   + N   +EA+  +SQM A 
Sbjct: 229 PAVTNTT-----SDNVLYVKEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEAN 283

Query: 237 GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNA 296
           G +P+  +   VL A   L  + + +  H  A +     +L +  AL+D+Y K G + +A
Sbjct: 284 GVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDA 343

Query: 297 RRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM 356
           R +F +M  +DV+ W+ +I+ Y +     DAV +F  MR + + P+   FVSVL AC+  
Sbjct: 344 RAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHA 403

Query: 357 EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTM 415
             LD G    +L+   G+   +     ++D+  + G+++ +     + P + +   W  +
Sbjct: 404 GLLDDGRYYFNLMAECGITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPL 463

Query: 416 I 416
           +
Sbjct: 464 L 464


>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
          Length = 770

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 241/699 (34%), Positives = 373/699 (53%), Gaps = 41/699 (5%)

Query: 147 TLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCG 206
           T+  EG  +    +   L   V MG       V   + K G  ++ FV T+L++A+  CG
Sbjct: 68  TMLTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCG 127

Query: 207 CVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLK 250
               AR++FDG+                 N      L  F +M  +G  P+++T    L 
Sbjct: 128 AARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLN 187

Query: 251 ACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIP 310
           ACL    + + K  HG A+K   E    +  +L  LY K G + +A R F  +P+K+VI 
Sbjct: 188 ACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVIT 247

Query: 311 WSFMIARYAQTDLSID-AVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
           W+ MI+  A+ +  ++  + LF  M    V PN+FT  SV+  C T   L+LG Q+ +  
Sbjct: 248 WTTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFS 307

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK-- 427
            ++G  +++ V N+ M +Y + G  + ++ LF +    + +TWN MI GY Q+ +  K  
Sbjct: 308 FKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDD 367

Query: 428 ---------AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
                    A+ +F  +    +     T+SS+L  C+++ ALE G Q+H  T+K+ +  D
Sbjct: 368 LQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSD 427

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
           VVV +AL++MY KCG I DA   F  M     V+W +MISGYS HG   E +++F+ M+ 
Sbjct: 428 VVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRL 487

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLD 598
            G RPN +TFV +LSACS  GL+E+ E YF  M   Y IEP ++HY  M+ +  R G ++
Sbjct: 488 AGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVE 547

Query: 599 KAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYA 658
            A   I+   F+P+  IW +L+  C  H N+E+   +A  +L+ +P+   T++LL N+Y 
Sbjct: 548 DAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYI 607

Query: 659 MARSWEKAA-------SKEPGL----SWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNM 707
               W+  A        ++ G+    SWI  +  V++FRA D +H     +  +LE L  
Sbjct: 608 STERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLE 667

Query: 708 KSRKAGYIPDLSAVLRDVREDEKER--YLWVHSEKLALAFALFKMPPSSPIRIIKNLRIC 765
           K++  GY P  +A L D  +DEK     L  HSE+LA+A  L + PP + +R+ KN+ +C
Sbjct: 668 KAKAIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATVRVTKNITMC 727

Query: 766 VDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
            DCH++IK+ S +  REII+RD  R H F+DG CSCGDF
Sbjct: 728 RDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 766



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 147/501 (29%), Positives = 244/501 (48%), Gaps = 32/501 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
            S  Y   L  C++   L  A  +H  + K G   D+F    L+N Y++     DA +LF
Sbjct: 77  QSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLF 136

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D MPERN +++   + GYT++SQ    + +F  +   G   + +   A L   ++    +
Sbjct: 137 DGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVD 196

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------- 218
           L   V     K G +S   +G +L   ++  G ++ A + F  +                
Sbjct: 197 LGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACA 256

Query: 219 -FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
              +C E  L+ F  M   G  PN FT   V+  C     + + K     + K   E +L
Sbjct: 257 EDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNL 316

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQ------TDL-----SID 326
            V  + + LY + GE   A R+FE+M    +I W+ MI+ YAQ       DL        
Sbjct: 317 PVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQ 376

Query: 327 AVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMD 386
           A+ +F  ++++ + P+ FTF S+L  C+ M  L+ G QIH+  ++ G LSDV V++AL++
Sbjct: 377 ALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVN 436

Query: 387 VYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVT 446
           +Y KCG ++++ + F E P R  VTW +MI GY Q G+  +A+ +F +M    V   E+T
Sbjct: 437 MYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEIT 496

Query: 447 YSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFD 503
           + S+L AC S A L    + +   +K  Y ++ VV +   +IDM+ + G + DA   +  
Sbjct: 497 FVSLLSAC-SYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKR 555

Query: 504 MMNDWNEVSWNAMISGYSMHG 524
              + NE  W+++++G   HG
Sbjct: 556 TGFEPNEAIWSSLVAGCRSHG 576



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 108/266 (40%), Gaps = 32/266 (12%)

Query: 50  SVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD 109
           SV + +  ++++ L  C     L+    IH Q +K G   D+   + L+N+Y K   + D
Sbjct: 387 SVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQD 446

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A K F EMP R  +++ + I GY+   Q  EA+ LF  +   G   N   F + L     
Sbjct: 447 ANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSY 506

Query: 170 MGWAELCPCVFACVYK-------LGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDC 222
            G  E     F  + K       + H         +ID F   G VE A           
Sbjct: 507 AGLVEEAEHYFDMMKKEYCIEPVVDHYG------CMIDMFVRLGRVEDA----------- 549

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
                  FS ++  GF+PN   ++ ++  C     + +A  A    L+      +   + 
Sbjct: 550 -------FSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLE-LKPKGIETYIL 601

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDV 308
           LL++Y  +    +  R+ + M ++DV
Sbjct: 602 LLNMYISTERWQDVARVRKLMKQEDV 627


>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 258/777 (33%), Positives = 397/777 (51%), Gaps = 38/777 (4%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +Y   L+ C           +H  V K    L +   N LL+++V+   L +A  +F +M
Sbjct: 96  TYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKM 155

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
            ER+  S+   + GY  +  F EA+ L+  +   G   + + F   L+    +       
Sbjct: 156 AERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGR 215

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GLF-ND 221
            V   V + G +S+  V  ALI  +  CG +  AR VFD               G F ND
Sbjct: 216 EVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFEND 275

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
              E L  F  MR     P+  T   V+ AC  L   R+ +  HG  +KT +  ++ V  
Sbjct: 276 VCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNN 335

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           +L+ +++  G    A  +F +M  KD++ W+ MI+ Y +  L   AVE +  M    V P
Sbjct: 336 SLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVP 395

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           ++ T  SVL ACA +  LD G  +H    R GL S V V+N+L+D+Y+KC  ++ ++E+F
Sbjct: 396 DEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVF 455

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
              P +N ++W ++I+G        +A+  F +M+    P + VT  SVL ACA + AL 
Sbjct: 456 HRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILSLKPNS-VTLVSVLSACARIGALS 514

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
            G ++H   ++     D  + NAL+DMY +CG +  A   F+     +  SWN +++GY+
Sbjct: 515 CGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCEK-DVASWNILLTGYA 573

Query: 522 MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
             G     +++F  M +    P+ +TF  +L ACS  G++  G  YF+SM   + I P +
Sbjct: 574 QQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNL 633

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
           +HY S+V LLGRAG L+ A + I+ +P  P   IW ALL AC I+ NVE+G L+AQHI +
Sbjct: 634 KHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFE 693

Query: 642 FEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDT 690
            + +    ++LL N+YA +  W++ A           + +PG SW+E  G VH F  GD 
Sbjct: 694 MDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDD 753

Query: 691 SHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDE----KERYLWVHSEKLALAFA 746
            H  +  I  +LE    K    G      ++ +D R D+    K      HSE+LA+AF 
Sbjct: 754 FHPQIKEINAVLEGFYEKMEATGL-----SMSKDSRRDDIDASKAEIFCGHSERLAIAFG 808

Query: 747 LFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGD 803
           L    P +PI + KNL +C +CH  +K ISK+V+R I +RD  +FHHF+DG CSCGD
Sbjct: 809 LINTVPGTPIWVTKNLYMCENCHNTVKFISKVVRRGISVRDTEQFHHFKDGVCSCGD 865



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 129/449 (28%), Positives = 224/449 (49%), Gaps = 6/449 (1%)

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
            E+AL     M+ +       T+  +L+ C            H    KT   + + +  A
Sbjct: 75  LEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNA 134

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           LL ++ + G++  A  +F +M ++D+  W+ ++  YA+     +A+ L+ RM    + P+
Sbjct: 135 LLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPD 194

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
            +TF  VL+ C  +  L  G ++H  V+R G  SDV V NAL+ +Y KCG + ++  +F 
Sbjct: 195 VYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFD 254

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
             P+R+ ++WN MI GY +     + + +F  M E  V    +T +SV+ AC +L     
Sbjct: 255 RMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERL 314

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G +VH   +K  +  +V V N+LI M++  G   +A +VF  M   + VSW AMISGY  
Sbjct: 315 GREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEK 374

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
           +GL  + ++ + +M+  G  P+ +T   VLSAC+  GLL++G           G+   + 
Sbjct: 375 NGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKG-IMLHEFADRTGLTSYVI 433

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRA-LLGACIIHNNVEIGRLSAQHILD 641
              S++ +  +   +DKA ++   IP   +V+ W + +LG  + + + E      Q IL 
Sbjct: 434 VANSLIDMYSKCRCIDKALEVFHRIP-NKNVISWTSIILGLRLNYRSFEALFFFQQMILS 492

Query: 642 FEPEDEATHVLLSNIYAMARSWEKAASKE 670
            +P    +  L+S + A AR    +  KE
Sbjct: 493 LKPN---SVTLVSVLSACARIGALSCGKE 518



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 140/481 (29%), Positives = 233/481 (48%), Gaps = 20/481 (4%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
           +++   L++C    DL     +H  V++ G   D+   N L+ +YVK   +  A  +FD 
Sbjct: 196 YTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDR 255

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
           MP R+ IS+   I GY  +   +E + LF  +     + +    T+ +    ++G   L 
Sbjct: 256 MPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLG 315

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-FNDCF------------ 223
             V   V K G  +   V  +LI   S  GC + A  VF  + F D              
Sbjct: 316 REVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKN 375

Query: 224 ---EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
              E+A+  ++ M   G  P+  T A VL AC GL  +      H  A +T     + VA
Sbjct: 376 GLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVA 435

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
            +L+D+Y+K   I  A  +F  +P K+VI W+ +I        S +A+  F +M  + + 
Sbjct: 436 NSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS-LK 494

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           PN  T VSVL ACA +  L  G +IH+  +R GL  D F+ NAL+D+Y +CGRME +   
Sbjct: 495 PNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQ 554

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F  S +++  +WN ++ GY Q G+ G A+ +F KM+E  V   E+T++S+L AC+    +
Sbjct: 555 F-NSCEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMV 613

Query: 461 EPGMQ-VHCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMIS 518
             G++    +  K +   ++    +++D+  + G + DA   +  M  D +   W A+++
Sbjct: 614 TDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLN 673

Query: 519 G 519
            
Sbjct: 674 A 674



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 2/210 (0%)

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
           N++I+     G++ KA+I    M E QV   E TY ++LR C    A   G +VH    K
Sbjct: 63  NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
               + V + NAL+ M+ + G + +A  VF  M + +  SWN ++ GY+  G   E L +
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
           +  M   G RP+  TF  VL  C     L +G      ++  YG E  ++   +++++  
Sbjct: 183 YHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVI-RYGFESDVDVVNALITMYV 241

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           + G +  A  + + +P +  +  W A++  
Sbjct: 242 KCGDIFSARLVFDRMPRRDRIS-WNAMISG 270



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 100/255 (39%), Gaps = 30/255 (11%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           NS +  + L +C +   L     IH   L+ G   D F  N LL++YV+  R+  A   F
Sbjct: 496 NSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQF 555

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           +   E++  S+   + GY    +   AV LF  +       +   FT+            
Sbjct: 556 NSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSL----------- 603

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDC-FEEALNFFSQM 233
           LC C  + +   G +       ++   F +   ++    V D L      E+A  F  +M
Sbjct: 604 LCACSRSGMVTDGLE----YFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKM 659

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD---LYVAVALLDLYTKS 290
                 P+   +  +L AC     + + +     A +  +EMD   +   + L +LY  S
Sbjct: 660 ---PIDPDPAIWGALLNACRIYQNVELGE----LAAQHIFEMDTKSVGYYILLCNLYADS 712

Query: 291 G---EISNARRIFEE 302
           G   E++  R+I  E
Sbjct: 713 GKWDEVARVRKIMRE 727


>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
          Length = 630

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 232/574 (40%), Positives = 332/574 (57%), Gaps = 50/574 (8%)

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
           E D+    AL+  Y + G++S AR +F+ MP +DV+ W+ M++ YA+    ++A  LF  
Sbjct: 65  EWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLF-- 122

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
              A    + FT+ +V+   A    L+   ++   +     +S     NA++  Y +   
Sbjct: 123 --DAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVS----WNAMVAAYIQRRM 176

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE-------------QV 440
           M+ + ELF   P RN  +WNTM+ GY Q G + +A  +F  M ++             Q 
Sbjct: 177 MDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQG 236

Query: 441 PATEVT------------------YSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
             +E T                  ++ VL  CA +AALE GMQ+H   ++A Y +   V 
Sbjct: 237 GCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVG 296

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
           NAL+ MY KCG++ DAR  F+ M + + VSWN MI+GY+ HG   E L++FD+M+    +
Sbjct: 297 NALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTK 356

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           P+++T VGVL+ACS+ GL+E+G +YF SM  ++G+    EHYT M+ LLGRAG L +A  
Sbjct: 357 PDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHD 416

Query: 603 LIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARS 662
           L++ +PF+P   +W ALLGA  IH N E+GR +A+ I + EPE+   +VLLSNIYA +  
Sbjct: 417 LMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGK 476

Query: 663 W-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRK 711
           W           E+   K PG SWIE Q  VH F AGD  H +   I   LE L+M+ +K
Sbjct: 477 WRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKK 536

Query: 712 AGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTA 771
           AGY+     VL DV E+EKE  L  HSEKLA+A+ +  +PP  PIR+IKNLR+C DCH A
Sbjct: 537 AGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNA 596

Query: 772 IKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            K IS I  R I++RD +RFHHF+ G CSCGD+W
Sbjct: 597 FKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 630



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 208/457 (45%), Gaps = 47/457 (10%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D  + N +L  YV+  R+ +A  LF+   E + IS+   + GY    +  EA  LF  + 
Sbjct: 36  DAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRM- 94

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFA-CVYKLGHDSNAFVGTALIDAFSVCGCV 208
                  P        ++VS G+A     V A  ++      + F  TA++  ++  G +
Sbjct: 95  -------PGRDVVSWNIMVS-GYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGML 146

Query: 209 EFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCA 268
           E AR+VFD +             +  AV +  N    A++ +    +D  +   +   C 
Sbjct: 147 EEARRVFDAM------------PERNAVSW--NAMVAAYIQRRM--MDEAKELFNMMPCR 190

Query: 269 LKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAV 328
               +         +L  Y ++G +  A+ +F+ MP+KD + W+ M+A Y+Q   S + +
Sbjct: 191 NVASWN-------TMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETL 243

Query: 329 ELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVY 388
           +LF  M +     N+  F  VL  CA +  L+ G Q+H  ++R G     FV NAL+ +Y
Sbjct: 244 QLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMY 303

Query: 389 AKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYS 448
            KCG ME++   F E  +R+ V+WNTMI GY + G   +A+ +F  M        ++T  
Sbjct: 304 FKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLV 363

Query: 449 SVLRACASLAALEPGMQVHCLTVKANYDMDVVVA----NALIDMYAKCGSITDAR-LVFD 503
            VL AC+    +E G+         ++D  V         +ID+  + G + +A  L+ D
Sbjct: 364 GVLAACSHSGLVEKGISYF---YSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKD 420

Query: 504 MMNDWNEVSWNAMISGYSMH-----GLSAEVLKVFDL 535
           M  + +   W A++    +H     G SA   K+F+L
Sbjct: 421 MPFEPDSTMWGALLGASRIHRNPELGRSA-AEKIFEL 456



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 23/230 (10%)

Query: 377 DVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML 436
           D    N ++  Y + GR+E +  LF    + + ++WN ++ GYVQ G++ +A  +F +M 
Sbjct: 36  DAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMP 95

Query: 437 EEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSIT 496
              V +  +  S   R    + A             A    DV    A++  YA+ G + 
Sbjct: 96  GRDVVSWNIMVSGYARRGDMVEARR--------LFDAAPVRDVFTWTAVVSGYAQNGMLE 147

Query: 497 DARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS 556
           +AR VFD M + N VSWNAM++ Y    +  E  ++F++M  R    N  ++  +L+  +
Sbjct: 148 EARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCR----NVASWNTMLTGYA 203

Query: 557 NGGLLEQGEAYFKS-----------MVANYGIEPCIEHYTSMVSLLGRAG 595
             G+LE+ +A F +           M+A Y    C E    +   +GR G
Sbjct: 204 QAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCG 253



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/250 (23%), Positives = 123/250 (49%), Gaps = 22/250 (8%)

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
           + D    N ++  +A  G +  +   F  +P+++ V+WN M+  YV+ G V +A  +F+ 
Sbjct: 3   VRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNS 62

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGS 494
             E  V    +++++++        +    ++           DVV  N ++  YA+ G 
Sbjct: 63  RTEWDV----ISWNALMSGYVQWGKMSEAREL----FDRMPGRDVVSWNIMVSGYARRGD 114

Query: 495 ITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSA 554
           + +AR +FD     +  +W A++SGY+ +G+  E  +VFD M +R    N +++  +++A
Sbjct: 115 MVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNAMVAA 170

Query: 555 CSNGGLLEQGEAYFKSMVANYGIEPC--IEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
                ++++ +  F  M       PC  +  + +M++   +AG L++A  + + +P Q  
Sbjct: 171 YIQRRMMDEAKELFNMM-------PCRNVASWNTMLTGYAQAGMLEEAKAVFDTMP-QKD 222

Query: 613 VMIWRALLGA 622
            + W A+L A
Sbjct: 223 AVSWAAMLAA 232



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 103/252 (40%), Gaps = 28/252 (11%)

Query: 88  CLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFST 147
           C ++ + N +L  Y +   L +A  +FD MP+++ +S+   +  Y+      E + LF  
Sbjct: 189 CRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIE 248

Query: 148 LHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGC 207
           + R G  +N  AF   L     +   E    +   + + G+    FVG AL+  +  CG 
Sbjct: 249 MGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGN 308

Query: 208 VEFARKVFD---------------GLFNDCF-EEALNFFSQMRAVGFKPNNFTFAFVLKA 251
           +E AR  F+               G     F +EAL  F  MR    KP++ T   VL A
Sbjct: 309 MEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAA 368

Query: 252 CLGLDTIRVAKSAHGCALKTCYEMDLYVAVA------LLDLYTKSGEISNARRIFEEMP- 304
           C     +       G +       D  V         ++DL  ++G ++ A  + ++MP 
Sbjct: 369 CSHSGLVE-----KGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPF 423

Query: 305 KKDVIPWSFMIA 316
           + D   W  ++ 
Sbjct: 424 EPDSTMWGALLG 435



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 60/261 (22%), Positives = 103/261 (39%), Gaps = 32/261 (12%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  ++A  L +C     L+  M +H ++++ G  +  F  N LL +Y K   + DA   F
Sbjct: 257 NRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAF 316

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           +EM ER+ +S+ T I GY       EA+ +F  +     + +       L      G  E
Sbjct: 317 EEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVE 376

Query: 175 LCPCVFACVYKLGHDSNAFVG----TALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFF 230
                F   Y + HD          T +ID     G +  A  +                
Sbjct: 377 KGISYF---YSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDL---------------- 417

Query: 231 SQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA---VALLDLY 287
             M+ + F+P++  +     A LG   I         A +  +E++   A   V L ++Y
Sbjct: 418 --MKDMPFEPDSTMWG----ALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIY 471

Query: 288 TKSGEISNARRIFEEMPKKDV 308
             SG+  +AR++   M ++ V
Sbjct: 472 ASSGKWRDARKMRVMMEERGV 492



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 76/149 (51%), Gaps = 10/149 (6%)

Query: 476 DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDL 535
           + D V  N ++  Y + G + +AR +F+   +W+ +SWNA++SGY   G  +E  ++FD 
Sbjct: 34  EKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDR 93

Query: 536 MQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAG 595
           M  R     N+   G       G ++E    +  + V +      +  +T++VS   + G
Sbjct: 94  MPGRDVVSWNIMVSGY---ARRGDMVEARRLFDAAPVRD------VFTWTAVVSGYAQNG 144

Query: 596 HLDKAAKLIEGIPFQPSVMIWRALLGACI 624
            L++A ++ + +P + +V  W A++ A I
Sbjct: 145 MLEEARRVFDAMPERNAVS-WNAMVAAYI 172



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 14/171 (8%)

Query: 478 DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQ 537
           D V  N +I  +A  G ++ AR  FD+  + + VSWN M++ Y  +G   E   +F+   
Sbjct: 5   DSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRT 64

Query: 538 QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHL 597
           +  W  + +++  ++S     G + +    F  M         +  +  MVS   R G +
Sbjct: 65  E--W--DVISWNALMSGYVQWGKMSEARELFDRMPGR-----DVVSWNIMVSGYARRGDM 115

Query: 598 DKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEA 648
            +A +L +  P +  V  W A++     +  +E     A+ + D  PE  A
Sbjct: 116 VEARRLFDAAPVR-DVFTWTAVVSGYAQNGMLE----EARRVFDAMPERNA 161


>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 573

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 221/541 (40%), Positives = 317/541 (58%), Gaps = 12/541 (2%)

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
           DL +A  LL  Y +   I +A  +F+ +  +D   WS M+  +A+          F  + 
Sbjct: 34  DLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAGDHAGCYATFRELL 93

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
           +  V P+ +T   V++ C     L +G  IH +V++ GLLSD FV  +L+D+YAKC  +E
Sbjct: 94  RCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVE 153

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
           ++  LF     ++ VTW  MI  Y       +++++F +M EE V   +V   +V+ ACA
Sbjct: 154 DAQRLFERMLSKDLVTWTVMIGAYADCNAY-ESLVLFDRMREEGVVPDKVAMVTVVNACA 212

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
            L A+      +   V+  + +DV++  A+IDMYAKCGS+  AR VFD M + N +SW+A
Sbjct: 213 KLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSA 272

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           MI+ Y  HG   + + +F +M      PN +TFV +L ACS+ GL+E+G  +F SM   +
Sbjct: 273 MIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEH 332

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS 635
            + P ++HYT MV LLGRAG LD+A +LIE +  +    +W ALLGAC IH+ +E+   +
Sbjct: 333 AVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGACRIHSKMELAEKA 392

Query: 636 AQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHY 684
           A  +L+ +P++   +VLLSNIYA A  WEK A            K PG +WIE     + 
Sbjct: 393 ANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLKKIPGWTWIEVDNKTYQ 452

Query: 685 FRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALA 744
           F  GD SH     I  ML  L  K   AGY+PD   VL+DV E+ K+  L+ HSEKLA+A
Sbjct: 453 FSVGDRSHPQSKEIYEMLMSLIKKLEMAGYVPDTDFVLQDVEEEVKQEMLYTHSEKLAIA 512

Query: 745 FALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
           F L  +P   PIRI KNLR+C DCHT  K++S I++R II+RD +RFHHF DG CSCGD+
Sbjct: 513 FGLIAIPEGEPIRISKNLRVCGDCHTFSKMVSSIMRRSIIVRDANRFHHFNDGTCSCGDY 572

Query: 805 W 805
           W
Sbjct: 573 W 573



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 169/359 (47%), Gaps = 23/359 (6%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           +H  V+  G   DL   N LL  Y +   + DA  LFD +  R++ ++   + G+  +  
Sbjct: 22  VHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAGD 81

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
                  F  L R G   + +     ++        ++   +   V K G  S+ FV  +
Sbjct: 82  HAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCAS 141

Query: 198 LIDAFSVCGCVEFARKVFD--------------GLFNDCFE-EALNFFSQMRAVGFKPNN 242
           L+D ++ C  VE A+++F+              G + DC   E+L  F +MR  G  P+ 
Sbjct: 142 LVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCNAYESLVLFDRMREEGVVPDK 201

Query: 243 FTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEE 302
                V+ AC  L  +  A+ A+   ++  + +D+ +  A++D+Y K G + +AR +F+ 
Sbjct: 202 VAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDR 261

Query: 303 MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA----TMEG 358
           M +K+VI WS MIA Y       DA++LF  M    + PN+ TFVS+L AC+      EG
Sbjct: 262 MKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEG 321

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF-AESPKRNHVTWNTMI 416
           L   N   S+     +  DV     ++D+  + GR++ ++ L  A + +++   W+ ++
Sbjct: 322 LRFFN---SMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALL 377



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 133/266 (50%), Gaps = 3/266 (1%)

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
            Q+H+ VV  G L D+ ++N L+  YA+   ++++  LF     R+  TW+ M+ G+ + 
Sbjct: 20  RQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKA 79

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
           G+       F ++L   V     T   V+R C     L+ G  +H + +K     D  V 
Sbjct: 80  GDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVC 139

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
            +L+DMYAKC  + DA+ +F+ M   + V+W  MI  Y+    + E L +FD M++ G  
Sbjct: 140 ASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCN-AYESLVLFDRMREEGVV 198

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           P+ +  V V++AC+  G + +       +V N G    +   T+M+ +  + G ++ A +
Sbjct: 199 PDKVAMVTVVNACAKLGAMHRARFANDYIVRN-GFSLDVILGTAMIDMYAKCGSVESARE 257

Query: 603 LIEGIPFQPSVMIWRALLGACIIHNN 628
           + + +  + +V+ W A++ A   H  
Sbjct: 258 VFDRMK-EKNVISWSAMIAAYGYHGR 282



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 119/272 (43%), Gaps = 19/272 (6%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           +++C    DLQ    IH  VLK G   D F    L+++Y K   + DA +LF+ M  ++ 
Sbjct: 108 IRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDL 167

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +++   I  Y   + + E++ LF  +  EG   +  A    +     +G           
Sbjct: 168 VTWTVMIGAYADCNAY-ESLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDY 226

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEA 226
           + + G   +  +GTA+ID ++ CG VE AR+VFD +                ++   ++A
Sbjct: 227 IVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDA 286

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVA-KSAHGCALKTCYEMDLYVAVALLD 285
           ++ F  M +    PN  TF  +L AC     I    +  +    +     D+     ++D
Sbjct: 287 IDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVD 346

Query: 286 LYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
           L  ++G +  A R+ E M  +KD   WS ++ 
Sbjct: 347 LLGRAGRLDEALRLIEAMTVEKDERLWSALLG 378



 Score = 42.7 bits (99), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 21/88 (23%), Positives = 43/88 (48%)

Query: 61  TSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPER 120
           T + +C +   +  A   +  +++ G  LD+     ++++Y K   +  A ++FD M E+
Sbjct: 206 TVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEK 265

Query: 121 NTISFVTTIQGYTVSSQFVEAVGLFSTL 148
           N IS+   I  Y    +  +A+ LF  +
Sbjct: 266 NVISWSAMIAAYGYHGRGKDAIDLFHMM 293


>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Cucumis sativus]
          Length = 697

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 232/645 (35%), Positives = 360/645 (55%), Gaps = 29/645 (4%)

Query: 189 DSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQ 232
           DS      +LI+ +  C  V  ARK+FD +                 N    E    F +
Sbjct: 54  DSKVNQLNSLINLYVKCDEVSIARKLFDSMPRRNVVSWSALMAGYMQNGNPLEVFELFKK 113

Query: 233 MRAV-GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
           M       PN +  A  + +C     +   K  HG ALK+  E   YV  AL+ LY+K  
Sbjct: 114 MVVKDNIFPNEYVIATAISSCDSQMYVE-GKQCHGYALKSGLEFHQYVKNALIQLYSKCS 172

Query: 292 EISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQ 351
           ++  A +I   +P  D+  ++ ++    Q     +AV++   +    +  N  T+V++ +
Sbjct: 173 DVGAAIQILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFR 232

Query: 352 ACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
            CA+++ + LG Q+H+ +++  +  DV++ ++++D+Y KCG + +    F     RN V+
Sbjct: 233 LCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVS 292

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
           W ++I  Y Q     +A+ +FSKM  + +P  E T + +  + A L+AL  G Q+H    
Sbjct: 293 WTSIIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAE 352

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
           K+    +V+V NALI MY K G I  A+ VF  M   N ++WNA+I+G+S HGL  E L 
Sbjct: 353 KSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALS 412

Query: 532 VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLL 591
           +F  M   G RPN +TF+GV+ AC++  L+++G  YF  ++  + I P +EHYT +V LL
Sbjct: 413 MFQDMMATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLL 472

Query: 592 GRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHV 651
            R+G LD+A   +        V+ WR LL AC +H + + GR  A+++L  EP D  T++
Sbjct: 473 SRSGRLDEAENFMRSHQINWDVVSWRTLLNACYVHKHYDKGRKIAEYLLQLEPRDVGTYI 532

Query: 652 LLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRG 700
           LLSN++A  R W           E+   KEPG+SW+E + + H F + D  H + N+I  
Sbjct: 533 LLSNMHARVRRWDHVVEIRKLMRERNVKKEPGVSWLEIRNVAHVFTSEDIKHPEANLIYE 592

Query: 701 MLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIK 760
            ++ L  K R  GY+PD+  VL D+ +++K   L  HSEKLA+A+ L K P  +PI +IK
Sbjct: 593 NVKDLLSKIRPLGYVPDIDNVLHDIEDEQKVDNLSYHSEKLAVAYGLMKTPSGAPITVIK 652

Query: 761 NLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           NLR+C DCHTAIK+ISK+  R I++RD +RFHHFQ+GCCSCGD+W
Sbjct: 653 NLRMCDDCHTAIKLISKVANRVIVVRDANRFHHFQNGCCSCGDYW 697



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 119/466 (25%), Positives = 218/466 (46%), Gaps = 26/466 (5%)

Query: 95  NVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHE 154
           N L+N+YVK + +  A KLFD MP RN +S+   + GY  +   +E   LF  +  + + 
Sbjct: 61  NSLINLYVKCDEVSIARKLFDSMPRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNI 120

Query: 155 L-NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARK 213
             N +     +    S  + E   C      K G + + +V  ALI  +S C  V  A +
Sbjct: 121 FPNEYVIATAISSCDSQMYVEGKQC-HGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQ 179

Query: 214 VFDGL-FNDCF---------------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDT 257
           +   +  ND F                EA++    + + G + NN T+  + + C  L  
Sbjct: 180 ILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKD 239

Query: 258 IRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIAR 317
           I + K  H   LK+  + D+Y+  +++D+Y K G + + R  F+ +  ++V+ W+ +IA 
Sbjct: 240 ITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAA 299

Query: 318 YAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD 377
           Y Q +   +A+ LF +M    + PN++T   +  + A +  L LG+Q+H+   + GL  +
Sbjct: 300 YFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGN 359

Query: 378 VFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
           V V NAL+ +Y K G +  +  +F+     N +TWN +I G+   G   +A+ MF  M+ 
Sbjct: 360 VMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMA 419

Query: 438 EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA----NALIDMYAKCG 493
                  VT+  V+ ACA L  ++ G       +K      +V        ++ + ++ G
Sbjct: 420 TGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMK---QFRIVPGLEHYTCIVGLLSRSG 476

Query: 494 SITDAR-LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
            + +A   +     +W+ VSW  +++   +H    +  K+ + + Q
Sbjct: 477 RLDEAENFMRSHQINWDVVSWRTLLNACYVHKHYDKGRKIAEYLLQ 522



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 175/381 (45%), Gaps = 21/381 (5%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N +  AT++ SC     ++     H   LK G     +  N L+ +Y K + +  A ++ 
Sbjct: 123 NEYVIATAISSCDSQMYVE-GKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQIL 181

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             +P  +   +   + G    +   EAV +   +  EG E N   +    ++  S+    
Sbjct: 182 YTVPGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDIT 241

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
           L   V A + K   D + ++G+++ID +  CG V   R  FD L                
Sbjct: 242 LGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYF 301

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            N+ FEEALN FS+M      PN +T A +  +  GL  + +    H  A K+  + ++ 
Sbjct: 302 QNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVM 361

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V  AL+ +Y KSG+I  A+ +F  M   ++I W+ +I  ++   L  +A+ +F  M    
Sbjct: 362 VGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATG 421

Query: 339 VAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
             PN  TF+ V+ ACA ++ +D G    + L+ +  ++  +     ++ + ++ GR++ +
Sbjct: 422 ERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRLDEA 481

Query: 398 VELFAESPKRNH--VTWNTMI 416
            E F  S + N   V+W T++
Sbjct: 482 -ENFMRSHQINWDVVSWRTLL 501



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 98/224 (43%), Gaps = 20/224 (8%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E+N+ +Y T  + C    D+     +H Q+LK     D++  + ++++Y K   +     
Sbjct: 221 EWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRT 280

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
            FD +  RN +S+ + I  Y  +  F EA+ LFS +  E   + P  +T  +    + G 
Sbjct: 281 FFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKM--EIDCIPPNEYTMAVLFNSAAGL 338

Query: 173 AELC--PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL------------ 218
           + LC    + A   K G   N  VG ALI  +   G +  A+ VF  +            
Sbjct: 339 SALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAII 398

Query: 219 ----FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTI 258
                +   +EAL+ F  M A G +PN  TF  V+ AC  L  +
Sbjct: 399 TGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKLV 442


>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 245/692 (35%), Positives = 383/692 (55%), Gaps = 30/692 (4%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           +A  LQ  I  + +     IH Q++  G   D F  N+L+NV  K +R+ +A  +FD+MP
Sbjct: 52  FANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMP 111

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHRE-GHELNPFAFTAFLKVLVSMGWAELCP 177
            +N I++ + +  Y+      EA+ +F  L R+ G   N F   + ++    +G  E   
Sbjct: 112 HKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGA 171

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL--------------FNDCF 223
            +   V + G D + +VGT+LID +S  G +E AR VFD L              +  C 
Sbjct: 172 QLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCG 231

Query: 224 EEA--LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
             A  L  F+QMR     P+ +  + VL AC  L+ +   K  H   L+   EMD+ V  
Sbjct: 232 RSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVN 291

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
            L+D YTK   +   R++F++M  K++I W+ MI+ Y Q     +A++LF  M +    P
Sbjct: 292 VLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKP 351

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           + F   SVL +C + E L+ G Q+H+  ++  L SD FV N L+D+YAK   + ++ ++F
Sbjct: 352 DGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVF 411

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
               ++N +++N MI GY    ++ +A+ +F +M        E T+++++ A ++LA+L 
Sbjct: 412 DVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLR 471

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
            G Q H   VK   D    V NAL+DMYAKCGSI +AR +F+     + V WN+MIS ++
Sbjct: 472 HGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHA 531

Query: 522 MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
            HG + E L +F  M + G +PN +TFV VLSACS+ G +E G  +F SM   +GI+P  
Sbjct: 532 QHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSM-PGFGIKPGT 590

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
           EHY  +VSLLGR+G L +A + IE +P +P+ ++WR+LL AC I  NVE+G+ +A+  + 
Sbjct: 591 EHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAIS 650

Query: 642 FEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDT 690
            +P+D  +++LLSNI+A    W                KEPG SWIE    V+ F A DT
Sbjct: 651 TDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARDT 710

Query: 691 SHADMNIIRGMLEWLNMKSRKAGYIPDLSAVL 722
           +H + + I  +L+ L    + AGY+PD +A+L
Sbjct: 711 THREAD-IGSVLDILIQHIKGAGYVPDATALL 741



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 115/328 (35%), Positives = 185/328 (56%), Gaps = 1/328 (0%)

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR 297
            +P    FA +L+  +  + I   K  HG  + +  + D ++A  L+++ +KS  + NAR
Sbjct: 45  LRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNAR 104

Query: 298 RIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQACATM 356
            +F++MP K++I WS M++ Y+Q   S +A+ +F  + R++   PN+F   SV++AC  +
Sbjct: 105 VVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQL 164

Query: 357 EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMI 416
             ++ G Q+H  VVR G   DV+V  +L+D Y+K G +E +  +F +  ++  VTW T+I
Sbjct: 165 GVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTII 224

Query: 417 VGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD 476
            GY + G    ++ +F++M E  V       SSVL AC+ L  LE G Q+H   ++   +
Sbjct: 225 AGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTE 284

Query: 477 MDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLM 536
           MDV V N LID Y KC  +   R +FD M   N +SW  MISGY  +    E +K+F  M
Sbjct: 285 MDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEM 344

Query: 537 QQRGWRPNNLTFVGVLSACSNGGLLEQG 564
            + GW+P+      VL++C +   LEQG
Sbjct: 345 NRLGWKPDGFACTSVLTSCGSREALEQG 372



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 123/426 (28%), Positives = 225/426 (52%), Gaps = 16/426 (3%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N    A+ +++C Q   ++    +H  V++ G   D++    L++ Y K   + +A  +F
Sbjct: 150 NEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVF 209

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D++ E+  +++ T I GYT   +   ++ LF+ +       + +  ++ L     + + E
Sbjct: 210 DQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLE 269

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GLF 219
               + A V + G + +  V   LID ++ C  V+  RK+FD               G  
Sbjct: 270 GGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYM 329

Query: 220 NDCFE-EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            + F+ EA+  F +M  +G+KP+ F    VL +C   + +   +  H   +K   E D +
Sbjct: 330 QNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEF 389

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V   L+D+Y KS  + +A+++F+ M +++VI ++ MI  Y+  +   +A+ELF  MR   
Sbjct: 390 VKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRL 449

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
             PN+FTF +++ A + +  L  G Q H+ +V++GL    FV+NAL+D+YAKCG +E + 
Sbjct: 450 QKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEAR 509

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
           ++F  S  R+ V WN+MI  + Q GE  +A+ MF +M++E +    VT+ +VL AC+   
Sbjct: 510 KMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAG 569

Query: 459 ALEPGM 464
            +E G+
Sbjct: 570 RVEDGL 575


>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Glycine max]
          Length = 693

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 230/639 (35%), Positives = 360/639 (56%), Gaps = 53/639 (8%)

Query: 220 NDCFEEALNFFSQMRAV----------GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCAL 269
           ++ FEEA++   Q + V            +P+   ++ ++ AC+    + + +  H    
Sbjct: 55  DNKFEEAVDVLCQQKRVKEAVELLHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTK 114

Query: 270 KTCYEMDLYVAVALLDLYTKS-------------------------------GEISNARR 298
            + +   ++++  LLD+Y K                                G +  AR+
Sbjct: 115 ASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARK 174

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQACATME 357
           +F+EMP++D   W+  I+ Y   +   +A+ELF  M R    + N+FT  S L A A + 
Sbjct: 175 LFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIP 234

Query: 358 GLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIV 417
            L LG +IH  ++R  L  D  V +AL+D+Y KCG ++ +  +F +   R+ V+W TMI 
Sbjct: 235 CLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIH 294

Query: 418 GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM 477
              + G   +  ++F  +++  V   E T++ VL ACA  AA   G +VH   + A YD 
Sbjct: 295 RCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDP 354

Query: 478 DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQ 537
                +AL+ MY+KCG+   AR VF+ M+  + VSW ++I GY+ +G   E L  F+L+ 
Sbjct: 355 GSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLL 414

Query: 538 QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHL 597
           Q G +P+ +T+VGVLSAC++ GL+++G  YF S+   +G+    +HY  ++ LL R+G  
Sbjct: 415 QSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRF 474

Query: 598 DKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIY 657
            +A  +I+ +P +P   +W +LLG C IH N+E+ + +A+ + + EPE+ AT++ L+NIY
Sbjct: 475 KEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKALYEIEPENPATYITLANIY 534

Query: 658 AMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLN 706
           A A  W + A+           K+PG SWIE +  VH F  GDTSH   + I   L  L+
Sbjct: 535 ANAGLWSEVANVRKDMDNMGIVKKPGKSWIEIKRQVHVFLVGDTSHPKTSDIHEFLGELS 594

Query: 707 MKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICV 766
            K ++ GY+PD + VL DV E++KE+ L  HSEKLA+ F +   PP +PI++ KNLR CV
Sbjct: 595 KKIKEEGYVPDTNFVLHDVEEEQKEQNLVYHSEKLAVVFGIISTPPGTPIKVFKNLRTCV 654

Query: 767 DCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           DCHTAIK ISKIVQR+I +RD +RFH F+DG CSC D+W
Sbjct: 655 DCHTAIKYISKIVQRKITVRDSNRFHCFEDGSCSCKDYW 693



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 181/382 (47%), Gaps = 21/382 (5%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           DL + N ++  Y KL RL  A KLFDEMP+R+  S+   I GY   +Q  EA+ LF  + 
Sbjct: 152 DLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQ 211

Query: 150 R-EGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCV 208
           R E    N F  ++ L    ++    L   +   + +   + +  V +AL+D +  CG +
Sbjct: 212 RHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSL 271

Query: 209 EFARKVFD-----------GLFNDCF-----EEALNFFSQMRAVGFKPNNFTFAFVLKAC 252
           + AR +FD            + + CF     EE    F  +   G +PN +TFA VL AC
Sbjct: 272 DEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNAC 331

Query: 253 LGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWS 312
                  + K  HG  +   Y+   +   AL+ +Y+K G    ARR+F EM + D++ W+
Sbjct: 332 ADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWT 391

Query: 313 FMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVR 371
            +I  YAQ     +A+  F  + Q+   P+Q T+V VL AC     +D G    HS+  +
Sbjct: 392 SLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEK 451

Query: 372 VGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMIVGYVQLG--EVGKA 428
            GL+        ++D+ A+ GR + +  +    P K +   W +++ G    G  E+ K 
Sbjct: 452 HGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKR 511

Query: 429 MIMFSKMLEEQVPATEVTYSSV 450
                  +E + PAT +T +++
Sbjct: 512 AAKALYEIEPENPATYITLANI 533



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 188/404 (46%), Gaps = 27/404 (6%)

Query: 196 TALIDAFSVCGCVEFARKVFDGLFN-DCF---------------EEALNFFSQM-RAVGF 238
             +I  ++  G +E ARK+FD +   D F                EAL  F  M R    
Sbjct: 157 NTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERS 216

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
             N FT +  L A   +  +R+ K  HG  ++T   +D  V  ALLDLY K G +  AR 
Sbjct: 217 SSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARG 276

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           IF++M  +DV+ W+ MI R  +     +   LF  + Q+ V PN++TF  VL ACA    
Sbjct: 277 IFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAA 336

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
             LG ++H  ++  G     F  +AL+ +Y+KCG    +  +F E  + + V+W ++IVG
Sbjct: 337 EHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVG 396

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ-VHCLTVKANYDM 477
           Y Q G+  +A+  F  +L+      +VTY  VL AC     ++ G++  H +  K     
Sbjct: 397 YAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMH 456

Query: 478 DVVVANALIDMYAKCGSITDARLVFDMMN-DWNEVSWNAMISGYSMHG---LSAEVLKVF 533
                  +ID+ A+ G   +A  + D M    ++  W +++ G  +HG   L+    K  
Sbjct: 457 TADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKAL 516

Query: 534 DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
             ++      N  T++ + +  +N GL  +     K M  N GI
Sbjct: 517 YEIEPE----NPATYITLANIYANAGLWSEVANVRKDM-DNMGI 555



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 112/269 (41%), Gaps = 30/269 (11%)

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
           L+    IH  +++    LD    + LL++Y K   L +A  +FD+M +R+ +S+ T I  
Sbjct: 236 LRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHR 295

Query: 132 YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSN 191
                +  E   LF  L + G   N + F   L          L   V   +   G+D  
Sbjct: 296 CFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPG 355

Query: 192 AFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRA 235
           +F  +AL+  +S CG    AR+VF+ +                 N   +EAL+FF  +  
Sbjct: 356 SFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQ 415

Query: 236 VGFKPNNFTFAFVLKACL-------GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYT 288
            G KP+  T+  VL AC        GL+     K  HG      +  D Y  V  +DL  
Sbjct: 416 SGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLM----HTADHYACV--IDLLA 469

Query: 289 KSGEISNARRIFEEMP-KKDVIPWSFMIA 316
           +SG    A  I + MP K D   W+ ++ 
Sbjct: 470 RSGRFKEAENIIDNMPVKPDKFLWASLLG 498


>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 249/715 (34%), Positives = 368/715 (51%), Gaps = 81/715 (11%)

Query: 102 VKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFT 161
           V+   L  A  LFD+MPER+ +S+   + GY  +    EA  +F  +             
Sbjct: 41  VRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM------------- 87

Query: 162 AFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND 221
                          PC            N+     ++ A+   G +E AR+    LF  
Sbjct: 88  ---------------PC-----------KNSISWNGMLAAYVQNGRIEDARR----LFES 117

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
             +  L  ++ M     K N    A  +                        E D     
Sbjct: 118 KADWELISWNCMMGGYVKRNRLVDARGI-------------------FDRMPERDEVSWN 158

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
            ++  Y ++GE+  A+R+FEE P +DV  W+ M++ Y Q  +  +A  +F  M +     
Sbjct: 159 TMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEK---- 214

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           N  ++ +++      + +D   ++   +       +V   N ++  YA+ G +  +   F
Sbjct: 215 NSVSWNAIIAGYVQCKRMDQARELFEAMP----CQNVSSWNTMITGYAQNGDIAQARNFF 270

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
              P+R+ ++W  +I GY Q G   +A+ +F +M  +       T++S L  CA +AALE
Sbjct: 271 DRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALE 330

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
            G QVH   VKA  +    V NAL+ MY KCG+I DA +VF+ + +   VSWN MI+GY+
Sbjct: 331 LGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYA 390

Query: 522 MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
            HG   E L +F+ M++ G  P+++T VGVLSACS+ GL+++G  YF SM  +YGI    
Sbjct: 391 RHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANS 450

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
           +HYT M+ LLGRAG LD A  L++ +PF+P    W ALLGA  IH N E+G  +A+ I +
Sbjct: 451 KHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFE 510

Query: 642 FEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDT 690
            EP++   +VLLSN+YA +  W           ++   K PG SW+E Q  +H F  GD+
Sbjct: 511 MEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDS 570

Query: 691 SHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKM 750
            H + + I   LE L++K +K GY+     VL DV E+EK   L  HSEKLA+AF +  +
Sbjct: 571 VHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAI 630

Query: 751 PPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           P   PIR+IKNLR+C DCH A+K ISKIV R II+RD HRFHHF  G CSCGD+W
Sbjct: 631 PAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 685



 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 125/474 (26%), Positives = 232/474 (48%), Gaps = 47/474 (9%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           S+   L    QN  ++ A     ++  +  C +  + N +L  YV+  R+ DA +LF+  
Sbjct: 63  SWNAMLSGYAQNGYVKEAK----EIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESK 118

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
            +   IS+   + GY   ++ V+A G+F  +        P         ++S G+A+   
Sbjct: 119 ADWELISWNCMMGGYVKRNRLVDARGIFDRM--------PERDEVSWNTMIS-GYAQNGE 169

Query: 178 CVFAC-VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAV 236
            + A  +++     + F  TA++  +   G ++ AR+VFDG+             +  +V
Sbjct: 170 LLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGM------------PEKNSV 217

Query: 237 GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNA 296
            +  N     +V   C  +D  R    A  C   + +         ++  Y ++G+I+ A
Sbjct: 218 SW--NAIIAGYV--QCKRMDQARELFEAMPCQNVSSWN-------TMITGYAQNGDIAQA 266

Query: 297 RRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM 356
           R  F+ MP++D I W+ +IA YAQ+    +A+ LF  M++     N+ TF S L  CA +
Sbjct: 267 RNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEI 326

Query: 357 EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMI 416
             L+LG Q+H  VV+ GL S  +V NAL+ +Y KCG ++++  +F    ++  V+WNTMI
Sbjct: 327 AALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMI 386

Query: 417 VGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD 476
            GY + G   +A+++F  M +  +   +VT   VL AC+    ++ G + +  ++  +Y 
Sbjct: 387 AGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTE-YFYSMTQDYG 445

Query: 477 MDVVVANA-----LIDMYAKCGSITDAR-LVFDMMNDWNEVSWNAMISGYSMHG 524
              + AN+     +ID+  + G + DA+ L+ +M  + +  +W A++    +HG
Sbjct: 446 ---ITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHG 496



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 115/430 (26%), Positives = 192/430 (44%), Gaps = 66/430 (15%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           NS S+   L + +QN  ++ A     ++ +     +L + N ++  YVK NRL DA  +F
Sbjct: 91  NSISWNGMLAAYVQNGRIEDAR----RLFESKADWELISWNCMMGGYVKRNRLVDARGIF 146

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D MPER+ +S+ T I GY  + + +EA  LF     E    + F +TA +   V  G  +
Sbjct: 147 DRMPERDEVSWNTMISGYAQNGELLEAQRLFE----ESPVRDVFTWTAMVSGYVQNGMLD 202

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------- 218
               VF  +     + N+    A+I  +  C  ++ AR++F+ +                
Sbjct: 203 EARRVFDGM----PEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYA 258

Query: 219 ----------FNDCF---------------------EEALNFFSQMRAVGFKPNNFTFAF 247
                     F D                       EEAL+ F +M+  G + N  TF  
Sbjct: 259 QNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTS 318

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
            L  C  +  + + K  HG  +K   E   YV  ALL +Y K G I +A  +FE + +K+
Sbjct: 319 TLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKE 378

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ-IH 366
           V+ W+ MIA YA+     +A+ LF  M++  + P+  T V VL AC+    +D G +  +
Sbjct: 379 VVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFY 438

Query: 367 SLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTM-----IVGYV 420
           S+    G+ ++      ++D+  + GR++++  L    P + +  TW  +     I G  
Sbjct: 439 SMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNT 498

Query: 421 QLGEVGKAMI 430
           +LGE    MI
Sbjct: 499 ELGEKAAKMI 508



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 174/383 (45%), Gaps = 32/383 (8%)

Query: 249 LKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDV 308
           L+ C+    +R A+           E D+    A+L  Y ++G +  A+ IF+EMP K+ 
Sbjct: 37  LRGCVRYRNLRAAR----LLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNS 92

Query: 309 IPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSL 368
           I W+ M+A Y Q     DA       R+ F +   +  +S    C  M G    N+   L
Sbjct: 93  ISWNGMLAAYVQNGRIEDA-------RRLFESKADWELIS--WNC-MMGGYVKRNR---L 139

Query: 369 VVRVGLLS-----DVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
           V   G+       D    N ++  YA+ G +  +  LF ESP R+  TW  M+ GYVQ G
Sbjct: 140 VDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNG 199

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN 483
            + +A  +F  M E+      V++++++        ++   ++     +A    +V   N
Sbjct: 200 MLDEARRVFDGMPEK----NSVSWNAIIAGYVQCKRMDQAREL----FEAMPCQNVSSWN 251

Query: 484 ALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRP 543
            +I  YA+ G I  AR  FD M   + +SW A+I+GY+  G   E L +F  M++ G R 
Sbjct: 252 TMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERL 311

Query: 544 NNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKL 603
           N  TF   LS C+    LE G+      V   G+E       +++ +  + G++D A  +
Sbjct: 312 NRSTFTSTLSTCAEIAALELGKQ-VHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIV 370

Query: 604 IEGIPFQPSVMIWRALLGACIIH 626
            EGI  +  V+ W  ++     H
Sbjct: 371 FEGIE-EKEVVSWNTMIAGYARH 392



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 119/274 (43%), Gaps = 33/274 (12%)

Query: 88  CLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFST 147
           C ++ + N ++  Y +   +  A   FD MP+R++IS+   I GY  S    EA+ LF  
Sbjct: 244 CQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVE 303

Query: 148 LHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGC 207
           + R+G  LN   FT+ L     +   EL   V   V K G +S  +VG AL+  +  CG 
Sbjct: 304 MKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGN 363

Query: 208 VEFARKVFDGL-------FNDCF---------EEALNFFSQMRAVGFKPNNFTFAFVLKA 251
           ++ A  VF+G+       +N            +EAL  F  M+  G  P++ T   VL A
Sbjct: 364 IDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSA 423

Query: 252 C-------LGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
           C        G +        +G    + +         ++DL  ++G + +A+ + + MP
Sbjct: 424 CSHTGLVDKGTEYFYSMTQDYGITANSKH------YTCMIDLLGRAGRLDDAQNLMKNMP 477

Query: 305 -KKDVIPWSFMIAR---YAQTDLSIDAVELFCRM 334
            + D   W  ++     +  T+L   A ++   M
Sbjct: 478 FEPDAATWGALLGASRIHGNTELGEKAAKMIFEM 511


>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
          Length = 694

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 238/625 (38%), Positives = 361/625 (57%), Gaps = 54/625 (8%)

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           AL  +  M ++G  P+++TF F+LK+C      +  +  HG  LK  +++D+YV  +L+ 
Sbjct: 73  ALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLIS 132

Query: 286 LYTKSGEISNARRIFE-------------------------------EMPKKDVIPWSFM 314
           +Y ++G + +AR++F+                               E+P KDV+ W+ M
Sbjct: 133 MYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAM 192

Query: 315 IARYAQTDLSIDAVELFCRMRQ-AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
           I+ Y +T    +A+ELF  M     V P++ T V+V+ ACA  + ++LG  +HS +   G
Sbjct: 193 ISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHG 252

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
             S++ + NAL+D+Y+K G +E + ELF     ++ ++WNT+I GY  +    +A+++F 
Sbjct: 253 FASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQ 312

Query: 434 KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN------ALID 487
           +ML       +VT  S+L ACA L A++ G  +H   V  N  +  VV N      +LID
Sbjct: 313 EMLRSGETPNDVTMLSILPACAHLGAIDIGRWIH---VYINKKLKGVVTNVSSLQTSLID 369

Query: 488 MYAKCGSITDARLVFDM-MNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNL 546
           MYAKCG I  A+ VFD  M++ +  +WNAMISG++MHG +     +F  M+  G  P+++
Sbjct: 370 MYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDI 429

Query: 547 TFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEG 606
           TFVG+LSACS+ G+L+ G   F+SM   Y I P +EHY  M+ LLG +G   +A ++I  
Sbjct: 430 TFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINT 489

Query: 607 IPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKA 666
           +P +P  +IW +LL AC IH N+E+G   A+ ++  EP +  ++VLLSNIYA A  W + 
Sbjct: 490 MPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEV 549

Query: 667 A------------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGY 714
           A             K PG S IE   +VH F  GD  H     I GMLE + +   +AG+
Sbjct: 550 AKIRALLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGMLEEMEVLLEEAGF 609

Query: 715 IPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKI 774
           +PD S VL+++ E+ +E  L  HSEKLA+AF L    P + + I+KNLR+C +CH A K+
Sbjct: 610 VPDTSEVLQEMEEEWREGALRHHSEKLAIAFGLISTKPGTKLTIMKNLRVCKNCHEATKL 669

Query: 775 ISKIVQREIIIRDVHRFHHFQDGCC 799
           ISKI +REII RD  RF HF+DG C
Sbjct: 670 ISKIYKREIIARDRTRFXHFRDGVC 694



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 137/293 (46%), Gaps = 37/293 (12%)

Query: 365 IHSLVVRVGLLSDVFVSNALMD---VYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQ 421
           IH+ +++ GL +  +  + L++   V         ++ +F    + N + WNTM  G+  
Sbjct: 7   IHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGHAL 66

Query: 422 LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVV 481
             +   A+ ++  M+   +     T+  +L++CA     + G Q+H   +K  +D+D+ V
Sbjct: 67  SSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYV 126

Query: 482 ANALIDMYAKCGSITDARLVFDM-------------------------------MNDWNE 510
             +LI MYA+ G + DAR VFD+                               +   + 
Sbjct: 127 HTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDV 186

Query: 511 VSWNAMISGYSMHGLSAEVLKVF-DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFK 569
           VSWNAMISGY   G   E L++F ++M     RP+  T V V+SAC+    +E G  +  
Sbjct: 187 VSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGR-HVH 245

Query: 570 SMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           S + ++G    ++   +++ L  + G ++ A +L +G+ +   V+ W  L+G 
Sbjct: 246 SWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGL-WNKDVISWNTLIGG 297


>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 238/778 (30%), Positives = 412/778 (52%), Gaps = 31/778 (3%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE- 116
           ++ + L++C    + +    IH   +K G    +F  N L+ +Y K   L  A  LFD  
Sbjct: 147 TFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGI 206

Query: 117 -MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAEL 175
            M + +T+S+ + I  +    + +EA+ LF  +   G   N + F A L+ +    + +L
Sbjct: 207 MMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKL 266

Query: 176 CPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF---------------- 219
              +     K  H ++ +V  ALI  ++ CG +E A +VF  +                 
Sbjct: 267 GMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQ 326

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           N+ + +ALN+F  M+    KP+  +   ++ A      +   K  H  A++   + ++ +
Sbjct: 327 NELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQI 386

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
              L+D+Y K   + +    FE M +KD+I W+ +IA YAQ +  ++A+ LF +++   +
Sbjct: 387 GNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGM 446

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
             +     SVL+AC+ ++  +   +IH  V +  L +D+ + NA+++VY + G  + +  
Sbjct: 447 DVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNVYGEVGHRDYARR 505

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
            F     ++ V+W +MI   V  G   +A+ +F  + +  +    +   S L A A+L++
Sbjct: 506 AFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSS 565

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
           L+ G ++H   ++  + ++  +A++L+DMYA CG++ ++R +F  +   + + W +MI+ 
Sbjct: 566 LKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINA 625

Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
             MHG   E + +F  M      P+++TF+ +L ACS+ GL+ +G+ +F+ M   Y +EP
Sbjct: 626 NGMHGCGNEAIALFKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEP 685

Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHI 639
             EHY  MV LL R+  L++A + +  +P +PS  +W ALLGAC IH+N E+G L+A+ +
Sbjct: 686 WPEHYACMVDLLSRSNSLEEAYQFVRSMPIKPSSEVWCALLGACHIHSNKELGELAAKEL 745

Query: 640 LDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAG 688
           L  + ++   + L+SNI+A    W                K PG SWIE    +H F A 
Sbjct: 746 LQSDTKNSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMAR 805

Query: 689 DTSHADM-NIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFAL 747
           D SH    +I   + ++  +  +K GYI     V  +V E+EK + L+ HSE+LAL + L
Sbjct: 806 DKSHPQTDDIYLKLAQFTKLLGKKGGYIAQTKFVFHNVSEEEKTQMLYRHSERLALGYGL 865

Query: 748 FKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
              P  + IRI KNLRIC DCHT  KI S++ QR +++RD +RFHHF+ G CSCGDFW
Sbjct: 866 LVTPKGTSIRITKNLRICDDCHTFFKIASEVSQRALVVRDANRFHHFERGLCSCGDFW 923



 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 163/624 (26%), Positives = 306/624 (49%), Gaps = 37/624 (5%)

Query: 33  ALSTQQCSNSTTTPITFSVSEFNSHSYATS----------LQSCIQNDDLQTAMTIHCQV 82
           ++S    +  T  P   S++  ++H  AT           L  C+    L     +H ++
Sbjct: 13  SISVNTLNKGTLNPAFQSLTLLSTHPLATPSRLEHAHSLLLDLCVAVKALPQGQQLHARL 72

Query: 83  LKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAV 142
           LK    L  F    LL++Y K   L DA K+FDEM ER   ++   +  +  S +++EA+
Sbjct: 73  LKSH--LSAFLATKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLEAI 130

Query: 143 GLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAF 202
            L+  +   G  ++   F + LK   ++G + L   +     K G     FV  ALI  +
Sbjct: 131 ELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMY 190

Query: 203 SVCGCVEFARKVFDGLF-------------------NDCFEEALNFFSQMRAVGFKPNNF 243
             CG +  AR +FDG+                      C  EAL+ F +M+ VG   N +
Sbjct: 191 GKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCL-EALSLFRRMQEVGVASNTY 249

Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
           TF   L+       +++    HG ALK+ +  D+YVA AL+ +Y K G + +A R+F  M
Sbjct: 250 TFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASM 309

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
             +D + W+ +++   Q +L  DA+  F  M+ +   P+Q + ++++ A      L  G 
Sbjct: 310 LCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGK 369

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
           ++H+  +R GL S++ + N L+D+YAKC  +++    F    +++ ++W T+I GY Q  
Sbjct: 370 EVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNE 429

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN 483
              +A+ +F K+  + +    +   SVLRAC+ L +     ++H    K +   D+++ N
Sbjct: 430 CHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL-ADIMLQN 488

Query: 484 ALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRP 543
           A++++Y + G    AR  F+ +   + VSW +MI+    +GL  E L++F  ++Q   +P
Sbjct: 489 AIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQP 548

Query: 544 NNLTFVGVLSACSNGGLLEQGEAYFKSMV-ANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           +++  +  LSA +N   L++G+     ++   + +E  I   +S+V +    G ++ + K
Sbjct: 549 DSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIA--SSLVDMYACCGTVENSRK 606

Query: 603 LIEGIPFQPSVMIWRALLGACIIH 626
           +   +  Q  +++W +++ A  +H
Sbjct: 607 MFHSVK-QRDLILWTSMINANGMH 629


>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
 gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
          Length = 738

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 224/610 (36%), Positives = 347/610 (56%), Gaps = 44/610 (7%)

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           PN++TF FV+KA   + ++   ++ HG  +K  +  DL+++ +L+  Y+  G++ +A  +
Sbjct: 129 PNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLV 188

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL 359
           F ++ +KD++ W+ MI+ + Q     +A++LF RM+     PN+ T V VL ACA    L
Sbjct: 189 FSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDL 248

Query: 360 DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGY 419
           + G      + R G+  ++ +SNA++D+Y KCG +E++  LF +  +++ V+W TMI GY
Sbjct: 249 EFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGY 308

Query: 420 VQLGEVGKAMIMFSKMLEEQVPA--------------------------------TEVTY 447
            ++G+   A  +F  M  E + A                                 EVT 
Sbjct: 309 AKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTL 368

Query: 448 SSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND 507
           +S L ACA L A++ G  +H    K    ++  +  +LIDMY+KCG +  A  VF  +  
Sbjct: 369 ASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVER 428

Query: 508 WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAY 567
            +   W+AMI+G +MHG     + +F  MQ+   +PN +TF  +L ACS+ GL+++G  +
Sbjct: 429 RDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLF 488

Query: 568 FKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
           F  M   YG+ P  +HY  MV +LGRAG L++A +LIE +P  PS  +W ALLGAC I+ 
Sbjct: 489 FNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYG 548

Query: 628 NVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWI 676
           NVE+  ++   +L+ +  +   +VLLSNIYA A  W+               KEPG S I
Sbjct: 549 NVELAEMACSRLLETDSNNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSI 608

Query: 677 ENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDE-KERYLW 735
           E  G++H F  GD SH     I   L+ +  + +  GY+ D S +L+ V E+  KE  L 
Sbjct: 609 EVNGIIHEFLVGDNSHPLSTEIYSKLDEIVARIKSTGYVSDESHLLQFVEEEYMKEHALN 668

Query: 736 VHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQ 795
           +HSEKLA+A+ L +M PS PIRI+KNLR+C DCH+  K+ISK+  R+I++RD +RFHHF 
Sbjct: 669 LHSEKLAIAYGLIRMEPSQPIRIVKNLRVCGDCHSVAKLISKLYNRDILLRDRYRFHHFS 728

Query: 796 DGCCSCGDFW 805
            G CSC D+W
Sbjct: 729 GGNCSCMDYW 738



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 117/429 (27%), Positives = 209/429 (48%), Gaps = 48/429 (11%)

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD------LYVAVALLDLYTKSGE 292
           K N  T   ++  C     +   K  H   L+T    D      L+ A AL    +    
Sbjct: 27  KSNPSTVPILIDKCANKKHL---KQLHAHMLRTGLFFDPPSATKLFTACAL----SSPSS 79

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQ 351
           +  A ++F+++P+ ++  W+ +I  +A +   I  + +F +M  ++   PN +TF  V++
Sbjct: 80  LDYACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIK 139

Query: 352 ACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
           A   +  L  G  IH +V++    SD+F+SN+L+  Y+  G ++++  +F++  +++ V+
Sbjct: 140 AATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVS 199

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
           WN+MI G+VQ G   +A+ +F +M  E      VT   VL ACA    LE G        
Sbjct: 200 WNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIE 259

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
           +   D++++++NA++DMY KCGS+ DAR +FD M + + VSW  MI GY+  G      +
Sbjct: 260 RNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARR 319

Query: 532 VFDLM---------------QQRG-----------------WRPNNLTFVGVLSACSNGG 559
           VFD+M               QQ G                  +PN +T    L+AC+  G
Sbjct: 320 VFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLG 379

Query: 560 LLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRAL 619
            ++ G  +    +   GI+      TS++ +  + GHL+KA ++   +  +  V +W A+
Sbjct: 380 AMDLG-GWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVE-RRDVFVWSAM 437

Query: 620 LGACIIHNN 628
           +    +H +
Sbjct: 438 IAGLAMHGH 446



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 158/312 (50%), Gaps = 14/312 (4%)

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYA--KCGRMENSVE 399
           N  T   ++  CA  + L    Q+H+ ++R GL  D   +  L    A      ++ + +
Sbjct: 29  NPSTVPILIDKCANKKHL---KQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACK 85

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE-QVPATEVTYSSVLRACASLA 458
           +F + P+ N  TWNT+I  +    +  + +++F +ML E Q      T+  V++A   ++
Sbjct: 86  VFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVS 145

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           +L  G  +H + +KA++  D+ ++N+LI  Y+  G +  A LVF  + + + VSWN+MIS
Sbjct: 146 SLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMIS 205

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           G+   G   E L++F  M+    RPN +T VGVLSAC+    LE G  +    +   GI+
Sbjct: 206 GFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGR-WACDYIERNGID 264

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL-SAQ 637
             +    +M+ +  + G L+ A +L + +  +  ++ W  +     I    ++G   +A+
Sbjct: 265 INLILSNAMLDMYVKCGSLEDARRLFDKME-EKDIVSWTTM-----IDGYAKVGDYDAAR 318

Query: 638 HILDFEPEDEAT 649
            + D  P ++ T
Sbjct: 319 RVFDVMPREDIT 330



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 106/438 (24%), Positives = 185/438 (42%), Gaps = 60/438 (13%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           NS+++   +++  +   L     IH  V+K     DLF +N L++ Y  L  L  A  +F
Sbjct: 130 NSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVF 189

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
            ++ E++ +S+ + I G+       EA+ LF  +  E    N       L         +
Sbjct: 190 SKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKR--ID 247

Query: 175 LCPCVFACVY--KLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------------- 219
           L    +AC Y  + G D N  +  A++D +  CG +E AR++FD +              
Sbjct: 248 LEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDG 307

Query: 220 ----------------------------------NDCFEEALNFFSQMR-AVGFKPNNFT 244
                                             N   +EAL  F +++     KPN  T
Sbjct: 308 YAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVT 367

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
            A  L AC  L  + +    H    K   +++ ++  +L+D+Y+K G +  A  +F  + 
Sbjct: 368 LASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVE 427

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-- 362
           ++DV  WS MIA  A       A++LF +M++  V PN  TF ++L AC+    +D G  
Sbjct: 428 RRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRL 487

Query: 363 --NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT-WNTMIVGY 419
             NQ+  +    G++        ++D+  + G +E +VEL  + P     + W  ++   
Sbjct: 488 FFNQMRPV---YGVVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGAC 544

Query: 420 VQLGEVGKAMIMFSKMLE 437
              G V  A +  S++LE
Sbjct: 545 RIYGNVELAEMACSRLLE 562



 Score = 48.1 bits (113), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 57/253 (22%), Positives = 101/253 (39%), Gaps = 26/253 (10%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  + A++L +C Q   +     IH  + K+G  L+   T  L+++Y K   L  A ++F
Sbjct: 364 NEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVF 423

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             +  R+   +   I G  +      A+ LFS +     + N   FT  L      G  +
Sbjct: 424 YSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVD 483

Query: 175 LCPCVF---ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFS 231
                F     VY +   S  +    ++D     GC+               EEA+    
Sbjct: 484 EGRLFFNQMRPVYGVVPGSKHY--ACMVDILGRAGCL---------------EEAVELIE 526

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL-DLYTKS 290
           +M  V   P+   +  +L AC     + +A+ A    L+T  + + + A  LL ++Y K+
Sbjct: 527 KMPIV---PSASVWGALLGACRIYGNVELAEMACSRLLET--DSNNHGAYVLLSNIYAKA 581

Query: 291 GEISNARRIFEEM 303
           G+     R+ + M
Sbjct: 582 GKWDCVSRLRQHM 594


>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 643

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 229/617 (37%), Positives = 355/617 (57%), Gaps = 35/617 (5%)

Query: 223 FEEALNFFSQMRAVGFKPNN---FTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           F  A++ F QMRA    P +    +    LK+C GL    +A S H  A+++    D + 
Sbjct: 28  FLHAISLFLQMRA-SVAPRSSVPASLPAALKSCAGLGLCTLAASLHALAIRSGSFADRFT 86

Query: 280 AVALLDLYTK-------------SGE-------ISNARRIFEEMPKKDVIPWSFMIARYA 319
           A ALL+L  K             SGE         + R++F+EM ++D + W+ +I   A
Sbjct: 87  ANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCA 146

Query: 320 QTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVF 379
           +     +A+ +   M +    P+ FT  +VL   A    +  G  +H   ++ G  +DVF
Sbjct: 147 EHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVF 206

Query: 380 VSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ 439
           V ++L+D+YA C +M+ S+++F      + V WN+M+ GY Q G V +A+ +F +ML+  
Sbjct: 207 VGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAG 266

Query: 440 VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR 499
           V    VT+SS++ A  +L+ L  G Q+H   ++A ++ ++ ++++LIDMY KCG++  AR
Sbjct: 267 VRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIAR 326

Query: 500 LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGG 559
            VF+ +   + VSW AMI GY++HG + E   +F+ M+    +PN++TF+ VL+ACS+ G
Sbjct: 327 RVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAG 386

Query: 560 LLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRAL 619
           L++ G  YF SM   YG  P +EH  ++   LGRAG LD+A   I  +  +P+  +W  L
Sbjct: 387 LVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTL 446

Query: 620 LGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------S 668
           L AC +H N  +    A+ I + EP+   +HV+LSN+Y+ +  W +AA            
Sbjct: 447 LRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRWNEAAQLRKSMRIKGMK 506

Query: 669 KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVRED 728
           KEP  SWIE +  +H F A D SH   + I   L   + +  + GY+P++  VL+D+ E+
Sbjct: 507 KEPACSWIEVKNKLHVFIAHDKSHPWYDRIIDALNVYSEQMIRQGYVPNMEDVLQDIEEE 566

Query: 729 EKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDV 788
           +K   L  HSEKLA+ F +   PP + IR++KNLR+CVDCH A K ISKIV REI++RDV
Sbjct: 567 QKREVLCGHSEKLAIVFGIISTPPGTTIRVMKNLRVCVDCHIATKFISKIVAREIVVRDV 626

Query: 789 HRFHHFQDGCCSCGDFW 805
           +RFH F+DG CSCGDFW
Sbjct: 627 NRFHRFKDGNCSCGDFW 643



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 184/398 (46%), Gaps = 40/398 (10%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRL--PDAT---- 111
           S   +L+SC        A ++H   ++ G+  D F  N LLN+ +KL     P  T    
Sbjct: 51  SLPAALKSCAGLGLCTLAASLHALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPS 110

Query: 112 --------------KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNP 157
                         K+FDEM ER+ +S+ T I G     +  EA+ +   + R+G   + 
Sbjct: 111 GEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDT 170

Query: 158 FAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG 217
           F  +  L +       +    V     K G D++ FVG++LID ++ C  ++++ KVFD 
Sbjct: 171 FTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDS 230

Query: 218 LFNDC-----------------FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRV 260
            F+DC                  EEAL  F +M   G +P   TF+ ++ A   L  +R+
Sbjct: 231 -FSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRL 289

Query: 261 AKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQ 320
            K  H   ++  +  +++++ +L+D+Y K G +  ARR+F  +   D++ W+ MI  YA 
Sbjct: 290 GKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYAL 349

Query: 321 TDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVF 379
              + +A  LF RM    V PN  TF++VL AC+    +D G    +S+  + G +  + 
Sbjct: 350 HGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLE 409

Query: 380 VSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMI 416
              AL D   + G ++ +    +E   K     W+T++
Sbjct: 410 HCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLL 447



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 178/363 (49%), Gaps = 38/363 (10%)

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSV---LQACATMEGLDLGNQIHS 367
           W++ I   A     + A+ LF +MR A VAP      S+   L++CA +    L   +H+
Sbjct: 15  WAYQIRMAASQGQFLHAISLFLQMR-ASVAPRSSVPASLPAALKSCAGLGLCTLAASLHA 73

Query: 368 LVVRVGLLSDVFVSNALMDVYAKC---------------GRMENSV-----ELFAESPKR 407
           L +R G  +D F +NAL+++  K                G +E++      ++F E  +R
Sbjct: 74  LAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLER 133

Query: 408 NHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVH 467
           + V+WNT+I+G  +     +A+ M  +M  +       T S+VL   A  A ++ GM VH
Sbjct: 134 DAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVH 193

Query: 468 CLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSA 527
              +K  +D DV V ++LIDMYA C  +  +  VFD  +D + V WN+M++GY+ +G   
Sbjct: 194 GYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVE 253

Query: 528 EVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV-ANYGIEPCIEHYTS 586
           E L +F  M Q G RP  +TF  ++ A  N  LL  G+     ++ A +     I   +S
Sbjct: 254 EALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFIS--SS 311

Query: 587 MVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN----------NVEIGRLSA 636
           ++ +  + G++D A ++  GI   P ++ W A++    +H            +E+G +  
Sbjct: 312 LIDMYCKCGNVDIARRVFNGIQ-SPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKP 370

Query: 637 QHI 639
            HI
Sbjct: 371 NHI 373


>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
 gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
          Length = 805

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 248/736 (33%), Positives = 397/736 (53%), Gaps = 30/736 (4%)

Query: 95  NVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHE 154
           N LL+++V+   + +A  +F  M ER+  S+   + GYT +  F EA+ L+  +   G  
Sbjct: 73  NALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIR 132

Query: 155 LNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKV 214
            + + F + L+             V A V +   D +  V  ALI  +  CG V  AR +
Sbjct: 133 PDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARML 192

Query: 215 FD---------------GLF-NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTI 258
           FD               G F ND   E L  F +MR +   P+  T   V+ AC  L   
Sbjct: 193 FDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDE 252

Query: 259 RVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARY 318
           R+    H   ++T Y+ ++ V  +L+ +Y   G    A  +F  M  +DV+ W+ +I+  
Sbjct: 253 RLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGC 312

Query: 319 AQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDV 378
               L   A+E +  M      P++ T  SVL ACA++  LD+G ++H L  R G +  V
Sbjct: 313 VDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYV 372

Query: 379 FVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE 438
            V+N+L+D+Y+KC R+E ++E+F + P ++ ++W ++I G        +A+I F KM+ +
Sbjct: 373 VVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMILK 432

Query: 439 QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDA 498
             P + VT  S L ACA + AL  G ++H   +KA    D  + NA++D+Y +CG +  A
Sbjct: 433 SKPNS-VTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTA 491

Query: 499 RLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNG 558
              F++ N+ +  +WN +++GY+  G  A V+++F  M +    P+++TF+ +L ACS  
Sbjct: 492 LNQFNL-NEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRS 550

Query: 559 GLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRA 618
           G++ +G  YF+ M  NY I P ++HY  +V LLGRAG L++A + IE +P +P   IW A
Sbjct: 551 GMVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGA 610

Query: 619 LLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS---------- 668
           LL AC IH +V +G L+AQHI   + E    ++LL N+YA +  W++ A           
Sbjct: 611 LLNACRIHRHVLLGELAAQHIFKQDAESIGYYILLCNLYADSGKWDEVAKVRRTMKEEGL 670

Query: 669 -KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVRE 727
             +PG SW+E +G VH F +GD  H  M  I  +LE    K + +G+     + +  ++ 
Sbjct: 671 IVDPGCSWVEVKGKVHAFLSGDNFHPQMQEINVVLEGFYEKMKTSGFNGQECSSMDGIQT 730

Query: 728 DEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRD 787
            + + +   HSE+ A+A++L    P  PI + KNL +C  CH+ +K ISKIV+REI +RD
Sbjct: 731 SKADIFCG-HSERQAIAYSLINSAPGMPIWVTKNLYMCQSCHSTVKFISKIVRREISVRD 789

Query: 788 VHRFHHFQDGCCSCGD 803
             +FHHF+DG CSCGD
Sbjct: 790 TEQFHHFKDGLCSCGD 805



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 142/457 (31%), Positives = 243/457 (53%), Gaps = 15/457 (3%)

Query: 149 HREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCV 208
           ++ G+    + + A L  LV++    L   + +   + G   NA+      + F   G  
Sbjct: 45  NKRGYSEGEYVWKAVLSSLVTLLSVRLGNALLSMFVRFGDVGNAW------NVFGRMGER 98

Query: 209 E-FARKVFDGLFNDC--FEEALNFFSQMRAVGFKPNNFTFAFVLKACLG-LDTIRVAKSA 264
           + F+  V  G +     F+EAL  + ++   G +P+ +TF  VL++C G +D +R  +  
Sbjct: 99  DLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPDVYTFPSVLRSCAGAMDLVR-GREV 157

Query: 265 HGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLS 324
           H   ++  ++MD+ V  AL+ +Y K G++ +AR +F++MP +D I W+ MI+ Y + D  
Sbjct: 158 HAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDEC 217

Query: 325 IDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNAL 384
           ++ +ELF RMR+  + P+  T  SV+ AC  +    LG Q+HS VVR     ++ V N+L
Sbjct: 218 LEGLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSL 277

Query: 385 MDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATE 444
           + +Y   G  + +  +F+    R+ V+W T+I G V      KA+  +  M        E
Sbjct: 278 IQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDE 337

Query: 445 VTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDM 504
           VT +SVL ACASL  L+ GM++H L  +  + + VVVAN+LIDMY+KC  I  A  +F  
Sbjct: 338 VTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQ 397

Query: 505 MNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG 564
           + D + +SW ++I+G  ++    E L  F  M  +  +PN++T +  LSAC+  G L  G
Sbjct: 398 IPDKDVISWTSVINGLRINNRCFEALIFFRKMILKS-KPNSVTLISALSACARVGALMCG 456

Query: 565 -EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKA 600
            E +  ++ A  G +  + +  +++ L  R G +  A
Sbjct: 457 KEIHAHALKAGMGFDGFLPN--AILDLYVRCGRMRTA 491



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 130/486 (26%), Positives = 235/486 (48%), Gaps = 22/486 (4%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
           +++ + L+SC    DL     +H  V++    +D+   N L+ +YVK   +  A  LFD+
Sbjct: 136 YTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDK 195

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
           MP R+ IS+   I GY  + + +E + LF  +     + +    T+ +     +G   L 
Sbjct: 196 MPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDERLG 255

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-----------FNDCF-- 223
             + + V +  +D N  V  +LI  +   G  + A  VF G+            + C   
Sbjct: 256 TQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDN 315

Query: 224 ---EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
              ++AL  +  M   G  P+  T A VL AC  L  + +    H  A +T + + + VA
Sbjct: 316 LLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVA 375

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
            +L+D+Y+K   I  A  IF ++P KDVI W+ +I      +   +A+  F +M      
Sbjct: 376 NSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMILK-SK 434

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           PN  T +S L ACA +  L  G +IH+  ++ G+  D F+ NA++D+Y +CGRM  ++  
Sbjct: 435 PNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQ 494

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F  + K +   WN ++ GY Q G+    M +F +M+E ++   +VT+ S+L AC+    +
Sbjct: 495 FNLNEK-DVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMV 553

Query: 461 EPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDARLVFDMMN-DWNEVSWNAMI 517
             G++ +   +K NY +   + +   ++D+  + G + +A    + M    +   W A++
Sbjct: 554 TEGLE-YFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALL 612

Query: 518 SGYSMH 523
           +   +H
Sbjct: 613 NACRIH 618



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 95/201 (47%), Gaps = 3/201 (1%)

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD-MDVVV 481
           G + +A+   + M E ++P  E  + +++R C +      G  V    + +    + V +
Sbjct: 12  GNLEQALKHLASMQEVKIPVEEDCFVALIRLCENKRGYSEGEYVWKAVLSSLVTLLSVRL 71

Query: 482 ANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW 541
            NAL+ M+ + G + +A  VF  M + +  SWN ++ GY+  G   E L ++  +   G 
Sbjct: 72  GNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGI 131

Query: 542 RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAA 601
           RP+  TF  VL +C+    L +G     + V  +  +  ++   +++++  + G +  A 
Sbjct: 132 RPDVYTFPSVLRSCAGAMDLVRGRE-VHAHVVRFDFDMDVDVVNALITMYVKCGDVVSAR 190

Query: 602 KLIEGIPFQPSVMIWRALLGA 622
            L + +P +  +  W A++  
Sbjct: 191 MLFDKMPTRDRIS-WNAMISG 210



 Score = 42.7 bits (99), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 3/106 (2%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           S+ NS +  ++L +C +   L     IH   LK G   D F  N +L++YV+  R+  A 
Sbjct: 433 SKPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTAL 492

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNP 157
             F+ + E++  ++   + GY    +    + LF  +     E+NP
Sbjct: 493 NQFN-LNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVES--EINP 535


>gi|356502497|ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 852

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 250/784 (31%), Positives = 398/784 (50%), Gaps = 72/784 (9%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQV------LKKGNCLDLFATNVLLNVYVKLNRLPDA 110
           H+ A S QS   ++ L   ++   Q+        K    D +  N +++ Y  + RL +A
Sbjct: 106 HNIADSYQSIFHSNQLLNGLSKSGQIDDARELFDKMLQRDEYTWNTMVSGYANVGRLVEA 165

Query: 111 TKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSM 170
            +LF+    R++I++ + I GY    +  EA  LF  +  EG + + +   + L+   ++
Sbjct: 166 RELFNGFSSRSSITWSSLISGYCRFGRQAEAFDLFKRMRLEGQKPSQYTLGSILRGCSAL 225

Query: 171 GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------- 219
           G  +    +   V K G +SN +V   L+D ++ C  +  A  +F GL            
Sbjct: 226 GLIQKGEMIHGYVVKNGFESNVYVVAGLVDMYAKCRHISEAEILFKGLAFNKGNHVLWTA 285

Query: 220 -------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC 272
                  N    +A+ FF  M   G + N FTF  +L AC  +      +  HGC ++  
Sbjct: 286 MVTGYAQNGDDHKAIEFFRYMHTEGVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRNG 345

Query: 273 YEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFC 332
           +  + YV  AL+D+Y K G++ +A+R+ E M   DV+ W+ MI    +     +A+ LF 
Sbjct: 346 FGCNAYVQSALVDMYAKCGDLGSAKRVLENMEDDDVVSWNSMIVGCVRHGFEEEAILLFK 405

Query: 333 RMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCG 392
           +M    +  + +TF SVL  C    G   G  +H LV++ G  +   VSNAL+D+YAK  
Sbjct: 406 KMHARNMKIDHYTFPSVLNCCIV--GRIDGKSVHCLVIKTGFENYKLVSNALVDMYAKTE 463

Query: 393 RMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLR 452
            +  +  +F +  +++ ++W +++ GY Q G   +++  F  M    V   +   +S+L 
Sbjct: 464 DLNCAYAVFEKMFEKDVISWTSLVTGYTQNGSHEESLKTFCDMRISGVSPDQFIVASILS 523

Query: 453 ACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS 512
           ACA L  LE G QVH   +K      + V N+L+ MYAKCG + DA  +F  M+  + ++
Sbjct: 524 ACAELTLLEFGKQVHSDFIKLGLRSSLSVNNSLVTMYAKCGCLDDADAIFVSMHVRDVIT 583

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
           W A+I GY+ +G   + LK                                   YF+ M 
Sbjct: 584 WTALIVGYARNGKGRDSLK-----------------------------------YFQQMK 608

Query: 573 ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIG 632
             YGIEP  EHY  M+ L GR G LD+A +++  +  +P   +W+ALL AC +H N+E+G
Sbjct: 609 KIYGIEPGPEHYACMIDLFGRLGKLDEAKEILNQMDVKPDATVWKALLAACRVHGNLELG 668

Query: 633 RLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGM 681
             +A ++ + EP +   +V+LSN+Y  AR W+ AA           +KEPG SWIE    
Sbjct: 669 ERAATNLFELEPMNAMPYVMLSNMYLAARKWDDAAKIRRLMKSKGITKEPGCSWIEMNSR 728

Query: 682 VHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKL 741
           +H F + D  H     I   ++ +  + ++ GY+PD++  L D+  + KE  L  HSEKL
Sbjct: 729 LHTFISEDRGHPREAEIYSKIDEIIRRIKEVGYVPDMNFSLHDMDREGKEAGLAYHSEKL 788

Query: 742 ALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSC 801
           A+AF L   PP +PIRI KNLR+C DCH+A+K IS +  R II+RD + FHHF++G CSC
Sbjct: 789 AVAFGLLASPPGAPIRIFKNLRVCGDCHSAMKYISGVFTRHIILRDSNCFHHFKEGECSC 848

Query: 802 GDFW 805
            D+W
Sbjct: 849 EDYW 852



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 131/490 (26%), Positives = 244/490 (49%), Gaps = 57/490 (11%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           + ++  + L+ C     +Q    IH  V+K G   +++    L+++Y K   + +A  LF
Sbjct: 211 SQYTLGSILRGCSALGLIQKGEMIHGYVVKNGFESNVYVVAGLVDMYAKCRHISEAEILF 270

Query: 115 DEMP--ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
             +   + N + +   + GY  +    +A+  F  +H EG E N F F + L    S+  
Sbjct: 271 KGLAFNKGNHVLWTAMVTGYAQNGDDHKAIEFFRYMHTEGVESNQFTFPSILTACSSVSA 330

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND----------- 221
                 V  C+ + G   NA+V +AL+D ++ CG +  A++V + + +D           
Sbjct: 331 HCFGEQVHGCIVRNGFGCNAYVQSALVDMYAKCGDLGSAKRVLENMEDDDVVSWNSMIVG 390

Query: 222 CF-----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRV-AKSAHGCALKTCYEM 275
           C      EEA+  F +M A   K +++TF  VL  C+     R+  KS H   +KT +E 
Sbjct: 391 CVRHGFEEEAILLFKKMHARNMKIDHYTFPSVLNCCI---VGRIDGKSVHCLVIKTGFEN 447

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
              V+ AL+D+Y K+ +++ A  +FE+M +KDVI W+ ++  Y Q     ++++ FC MR
Sbjct: 448 YKLVSNALVDMYAKTEDLNCAYAVFEKMFEKDVISWTSLVTGYTQNGSHEESLKTFCDMR 507

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
            + V+P+QF   S+L ACA +  L+ G Q+HS  +++GL S + V+N+L+ +YAKCG ++
Sbjct: 508 ISGVSPDQFIVASILSACAELTLLEFGKQVHSDFIKLGLRSSLSVNNSLVTMYAKCGCLD 567

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
           ++  +F     R+ +TW  +IVGY + G+   ++  F +M                    
Sbjct: 568 DADAIFVSMHVRDVITWTALIVGYARNGKGRDSLKYFQQM-------------------K 608

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS-WN 514
            +  +EPG + +                 +ID++ + G + +A+ + + M+   + + W 
Sbjct: 609 KIYGIEPGPEHYA---------------CMIDLFGRLGKLDEAKEILNQMDVKPDATVWK 653

Query: 515 AMISGYSMHG 524
           A+++   +HG
Sbjct: 654 ALLAACRVHG 663


>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 934

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 250/779 (32%), Positives = 399/779 (51%), Gaps = 31/779 (3%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N ++ AT ++SC    D      +   V+K G    +   N L++++   + + +A+ +F
Sbjct: 159 NENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVF 218

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D+M ER+TIS+ + I     +    +++  FS +     + +    +A L V  S     
Sbjct: 219 DDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLR 278

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
               +   V K G +SN  V  +L+  +S  G  E A  VF  +                
Sbjct: 279 WGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHV 338

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            N  +  AL    +M       N  TF   L AC  L+T+++    H   +      +L 
Sbjct: 339 DNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETLKIV---HAFVILLGLHHNLI 395

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           +  AL+ +Y K G ++ A+R+ + MP +D + W+ +I  +A       A+E F  +R+  
Sbjct: 396 IGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEG 455

Query: 339 VAPNQFTFVSVLQACATMEGL-DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
           V  N  T V++L A  + + L D G  IH+ +V  G   + FV ++L+ +YA+CG +  S
Sbjct: 456 VPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTS 515

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
             +F     +N  TWN ++      G   +A+ +  KM  + +   + ++S       +L
Sbjct: 516 NYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNL 575

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
             L+ G Q+H L +K  ++ +  V NA +DMY KCG I D   +       ++ SWN +I
Sbjct: 576 TLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNILI 635

Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
           S  + HG   +  + F  M   G RP+++TFV +LSACS+GGL+++G AYF SM   +G+
Sbjct: 636 SALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTKFGV 695

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQ 637
              IEH   ++ LLGRAG L +A   I  +P  P+ ++WR+LL AC IH N+E+ R +A 
Sbjct: 696 PTGIEHCVCIIDLLGRAGKLTEAENFINKMPVPPTDLVWRSLLAACKIHGNLELARKAAD 755

Query: 638 HILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFR 686
            + + +  D++ +VL SN+ A  R W    +           K+P  SW++ +  V  F 
Sbjct: 756 RLFELDSSDDSAYVLYSNVCASTRRWRDVENVRKQMESHNIKKKPACSWVKLKNQVTTFG 815

Query: 687 AGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFA 746
            GD  H     I   LE L    R+AGY+PD S  L+D  E++KE  LW HSE++ALAF 
Sbjct: 816 MGDQYHPQNAEIYAKLEELKKIIREAGYMPDTSYSLQDTDEEQKEHNLWNHSERIALAFG 875

Query: 747 LFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           L      SP+RI KNLR+C DCH+  K++S+I+ R+II+RD +RFHHF  G CSC D+W
Sbjct: 876 LINSSEGSPLRIFKNLRVCGDCHSVFKMVSQIIGRKIILRDAYRFHHFSSGKCSCSDYW 934



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 160/587 (27%), Positives = 279/587 (47%), Gaps = 22/587 (3%)

Query: 73  QTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGY 132
           + A  +H  V+K G   D+F    LL+ Y     + +   +F E+ E N +S+ + + GY
Sbjct: 76  EGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIEEPNIVSWTSLMVGY 135

Query: 133 TVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNA 192
             +    E + ++  L R+G   N  A    ++    +    L   V   V K G D+  
Sbjct: 136 AYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTV 195

Query: 193 FVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAV 236
            V  +LI  F  C  +E A  VFD +                 N   E++L +FSQMR  
Sbjct: 196 SVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYT 255

Query: 237 GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNA 296
             K +  T + +L  C     +R  +  HG  +K+  E ++ V  +LL +Y+++G+  +A
Sbjct: 256 HAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDA 315

Query: 297 RRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM 356
             +F +M ++D+I W+ M+A +        A+EL   M Q   A N  TF + L AC  +
Sbjct: 316 EFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNL 375

Query: 357 EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMI 416
           E L +   +H+ V+ +GL  ++ + NAL+ +Y K G M  +  +    P R+ VTWN +I
Sbjct: 376 ETLKI---VHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALI 432

Query: 417 VGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA-LEPGMQVHCLTVKANY 475
            G+    E   A+  F+ + EE VP   +T  ++L A  S    L+ GM +H   V A +
Sbjct: 433 GGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGF 492

Query: 476 DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDL 535
           +++  V ++LI MYA+CG +  +  +FD++ + N  +WNA++S  + +G   E LK+   
Sbjct: 493 ELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIK 552

Query: 536 MQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAG 595
           M+  G   +  +F    +   N  LL++G+    S++  +G E       + + + G+ G
Sbjct: 553 MRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQ-LHSLIIKHGFESNDYVLNATMDMYGKCG 611

Query: 596 HLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDF 642
            +D   +++   P   S   W  L+ A   H   +  R +   +LD 
Sbjct: 612 EIDDVFRILPQ-PRSRSQRSWNILISALARHGFFQQAREAFHEMLDL 657



 Score =  205 bits (522), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 142/544 (26%), Positives = 269/544 (49%), Gaps = 29/544 (5%)

Query: 100 VYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFA 159
           +Y K   +  A  +FD+MPERN  S+   + G+     + +A+  F   H   H + P +
Sbjct: 1   MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFC--HMLEHGVRPSS 58

Query: 160 FTAFLKVLV---SMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD 216
           + A   V     S    E    V A V K G   + FVGT+L+  +   G V     VF 
Sbjct: 59  YVAASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFK 118

Query: 217 GL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRV 260
            +                +N C +E ++ + ++R  G   N    A V+++C  L    +
Sbjct: 119 EIEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKML 178

Query: 261 AKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQ 320
                G  +K+  +  + VA +L+ ++     I  A  +F++M ++D I W+ +I     
Sbjct: 179 GYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVH 238

Query: 321 TDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFV 380
                 ++E F +MR      +  T  ++L  C + + L  G  +H +VV+ GL S+V V
Sbjct: 239 NGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCV 298

Query: 381 SNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQV 440
            N+L+ +Y++ G+ E++  +F +  +R+ ++WN+M+  +V  G   +A+ +  +ML+ + 
Sbjct: 299 CNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRK 358

Query: 441 PATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARL 500
               VT+++ L AC +L  L+    VH   +      ++++ NAL+ MY K GS+  A+ 
Sbjct: 359 ATNYVTFTTALSACYNLETLKI---VHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQR 415

Query: 501 VFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSA-CSNGG 559
           V  +M D +EV+WNA+I G++ +      ++ F+L+++ G   N +T V +LSA  S   
Sbjct: 416 VCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDD 475

Query: 560 LLEQG-EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRA 618
           LL+ G   +   +VA + +E  ++  +S++++  + G L+ +  + + +  + S   W A
Sbjct: 476 LLDHGMPIHAHIVVAGFELETFVQ--SSLITMYAQCGDLNTSNYIFDVLANKNS-STWNA 532

Query: 619 LLGA 622
           +L A
Sbjct: 533 ILSA 536



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 177/344 (51%), Gaps = 3/344 (0%)

Query: 286 LYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFT 345
           +Y+K G I +A+ +F++MP+++   W+ +++ + +      A++ FC M +  V P+ + 
Sbjct: 1   MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60

Query: 346 FVSVLQACATMEGLDLGN-QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
             S++ AC     +  G  Q+H+ V++ GL  DVFV  +L+  Y   G +     +F E 
Sbjct: 61  AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
            + N V+W +++VGY   G V + M ++ ++  + V   E   ++V+R+C  L     G 
Sbjct: 121 EEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGY 180

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
           QV    +K+  D  V VAN+LI M+  C SI +A  VFD M + + +SWN++I+    +G
Sbjct: 181 QVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNG 240

Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY 584
              + L+ F  M+    + + +T   +L  C +   L  G      MV   G+E  +   
Sbjct: 241 HCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRG-LHGMVVKSGLESNVCVC 299

Query: 585 TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
            S++S+  +AG  + A  +   +  +  ++ W +++ + + + N
Sbjct: 300 NSLLSMYSQAGKSEDAEFVFHKMR-ERDLISWNSMMASHVDNGN 342


>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 694

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 237/641 (36%), Positives = 360/641 (56%), Gaps = 31/641 (4%)

Query: 196 TALIDAFSVCGCVEFARKVFDG----------------LFNDCFEEALNFFSQMRAVGFK 239
            +L+  +  CG +  AR +FD                 L      E L  F  M ++   
Sbjct: 54  NSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNA 113

Query: 240 -PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
            PN + F   L AC     ++     HG   K       YV  AL+ +Y++   +  A +
Sbjct: 114 CPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQ 173

Query: 299 IFEEMPKK---DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACAT 355
           + + +P +   D+  ++ ++    ++    +AVE+  RM    VA +  T+V V+  CA 
Sbjct: 174 VLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQ 233

Query: 356 MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTM 415
           +  L LG ++H+ ++R GL+ D FV + L+D+Y KCG + N+  +F     RN V W  +
Sbjct: 234 IRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTAL 293

Query: 416 IVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY 475
           +  Y+Q G   +++ +F+ M  E     E T++ +L ACA +AAL  G  +H    K  +
Sbjct: 294 MTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGF 353

Query: 476 DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDL 535
              V+V NALI+MY+K GSI  +  VF  M   + ++WNAMI GYS HGL  + L+VF  
Sbjct: 354 KNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQD 413

Query: 536 MQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAG 595
           M      PN +TF+GVLSA S+ GL+++G  Y   ++ N+ IEP +EHYT MV+LL RAG
Sbjct: 414 MVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRAG 473

Query: 596 HLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSN 655
            LD+A   ++    +  V+ WR LL AC +H N ++GR  A+ +L  +P D  T+ LLSN
Sbjct: 474 LLDEAENFMKTTQVKWDVVAWRTLLNACHVHRNYDLGRRIAESVLQMDPHDVGTYTLLSN 533

Query: 656 IYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEW 704
           +YA AR W           E+   KEPG SW++ +  +H F +  ++H +   I   ++ 
Sbjct: 534 MYAKARRWDGVVTIRKLMRERNIKKEPGASWLDIRNDIHVFLSEGSNHPESIQIYKKVQQ 593

Query: 705 LNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRI 764
           L    +  GY+P++++VL DV +++KE YL  HSEKLALA+ L K+P  +PIRIIKNLR+
Sbjct: 594 LLALIKPLGYVPNIASVLHDVEDEQKEGYLSYHSEKLALAYGLMKIPSPAPIRIIKNLRM 653

Query: 765 CVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           C DCHTA+K+ISK+  R II+RD +RFHHF+DG C+C D W
Sbjct: 654 CDDCHTAVKLISKVTNRLIIVRDANRFHHFRDGSCTCLDHW 694



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 217/452 (48%), Gaps = 24/452 (5%)

Query: 95  NVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTL-HREGH 153
           N L+++YVK  +L  A  LFD MP RN +S+   + GY      +E + LF  +   +  
Sbjct: 54  NSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNA 113

Query: 154 ELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARK 213
             N + FT  L      G  +        ++K G   + +V +AL+  +S C  VE A +
Sbjct: 114 CPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQ 173

Query: 214 VFDGL----FNDCF---------------EEALNFFSQMRAVGFKPNNFTFAFVLKACLG 254
           V D +     ND F               EEA+    +M       ++ T+  V+  C  
Sbjct: 174 VLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQ 233

Query: 255 LDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFM 314
           +  +++    H   L+     D +V   L+D+Y K GE+ NAR +F+ +  ++V+ W+ +
Sbjct: 234 IRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTAL 293

Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL 374
           +  Y Q     +++ LF  M +    PN++TF  +L ACA +  L  G+ +H+ V ++G 
Sbjct: 294 MTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGF 353

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
            + V V NAL+++Y+K G +++S  +F +   R+ +TWN MI GY   G   +A+ +F  
Sbjct: 354 KNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQD 413

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKC 492
           M+  +     VT+  VL A + L  ++ G   +   +  N+ ++  + +   ++ + ++ 
Sbjct: 414 MVSAEECPNYVTFIGVLSAYSHLGLVKEGF-YYLNHLMRNFKIEPGLEHYTCMVALLSRA 472

Query: 493 GSITDARLVFDMMN-DWNEVSWNAMISGYSMH 523
           G + +A          W+ V+W  +++   +H
Sbjct: 473 GLLDEAENFMKTTQVKWDVVAWRTLLNACHVH 504



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 143/290 (49%), Gaps = 11/290 (3%)

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHS-LVVRVGLLSDVFVS--NALMDVYAKCGRMENS 397
           P+      +L+ CA ++ L  G  +H+  ++R    +   +S  N+L+ +Y KCG++  +
Sbjct: 10  PSLEELGKLLKLCADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLA 69

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ-VPATEVTYSSVLRACAS 456
             LF   P RN V+WN ++ GY+  G   + +++F  M+  Q     E  +++ L AC+ 
Sbjct: 70  RNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSH 129

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMM--NDWNEV-SW 513
              ++ GMQ H L  K        V +AL+ MY++C  +  A  V D +     N++ S+
Sbjct: 130 GGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSY 189

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG-EAYFKSMV 572
           N++++     G   E ++V   M       +++T+VGV+  C+    L+ G   + + + 
Sbjct: 190 NSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLR 249

Query: 573 ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
                +  +   + ++ + G+ G +  A  + +G+    +V++W AL+ A
Sbjct: 250 GGLMFDEFVG--SMLIDMYGKCGEVLNARNVFDGLQ-NRNVVVWTALMTA 296



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 154/367 (41%), Gaps = 50/367 (13%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +Y   +  C Q  DLQ  + +H ++L+ G   D F  ++L+++Y K   + +A  +FD +
Sbjct: 223 TYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGL 282

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
             RN + +   +  Y  +  F E++ LF+ + REG   N + F   L     +       
Sbjct: 283 QNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGD 342

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF-DGLFNDCF------------- 223
            + A V KLG  ++  V  ALI+ +S  G ++ +  VF D ++ D               
Sbjct: 343 LLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHG 402

Query: 224 --EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
             ++AL  F  M +    PN  TF  VL A   L  ++              E   Y   
Sbjct: 403 LGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVK--------------EGFYY--- 445

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
                      +++  R F+  P  +   ++ M+A  ++  L +D  E F +  Q  V  
Sbjct: 446 -----------LNHLMRNFKIEPGLE--HYTCMVALLSRAGL-LDEAENFMKTTQ--VKW 489

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           +   + ++L AC      DLG +I   V+++    DV     L ++YAK  R +  V + 
Sbjct: 490 DVVAWRTLLNACHVHRNYDLGRRIAESVLQMD-PHDVGTYTLLSNMYAKARRWDGVVTIR 548

Query: 402 AESPKRN 408
               +RN
Sbjct: 549 KLMRERN 555


>gi|302799324|ref|XP_002981421.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
 gi|300150961|gb|EFJ17609.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
          Length = 789

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 262/773 (33%), Positives = 408/773 (52%), Gaps = 42/773 (5%)

Query: 68  QNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVT 127
           ++  L+    IH +V++ G    LF +N LL++Y +L    DA  L D MP RN +S+  
Sbjct: 24  ESTSLEQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRRNALSWNA 83

Query: 128 TIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLG 187
            I+    +  F  ++  F  + ++G   +   F + +K   ++   E+   V     K G
Sbjct: 84  VIRANAQAGDFPRSLLFFQRMLQDGSLPDAVVFLSLIKAPRTIQEGEI---VQEFAEKSG 140

Query: 188 HDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFS 231
            D +  VGTALI  +  CG ++ A+  FD +                  D  E++L  F 
Sbjct: 141 FDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQSLRVFR 200

Query: 232 QMRAVGFKPNNFTFAFVLKACLGL--DTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK 289
           +M   G  PN  T   +  A  G+           H C++ +       VA ++++L+ +
Sbjct: 201 EMLLQGIAPNAVTIICIASAVAGIAAKITTCGNLIHSCSIDSGLISVTTVANSIINLFGR 260

Query: 290 SGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSV 349
            G I+ A  IFE+M ++DV  W+ MI+ +AQ   S  A++L+ RM    + P+  TFV+V
Sbjct: 261 GGNITRANDIFEKMDRRDVCSWNTMISAFAQNGHSSGALDLYGRM---TIRPDGVTFVNV 317

Query: 350 LQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNH 409
           L+AC   + L+ G  IH  V   G  SD+ V+ AL+ +Y +CGR++ + E+FA       
Sbjct: 318 LEACDCPDDLERGESIHRDVRAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAIQHPGV 377

Query: 410 VTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ-VHC 468
           +T N +I  + Q G    +++ F +ML+  +  ++ T  +VL ACA+  A     + +H 
Sbjct: 378 ITLNAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVLGACATSGAAASAGRDLHR 437

Query: 469 LTVKANYD---MDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGL 525
              +   D    D++V NAL++MYAKCG +  AR +FD     N  +WNA+++GY+ HG 
Sbjct: 438 WMAECPGDCDPHDILVRNALVNMYAKCGDLDAARGIFDAAPQGNVSTWNAIMAGYAQHGY 497

Query: 526 SAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYT 585
           +   +++   MQ  G  P+ ++F   LSA S+   +E G   F ++  +YG+ P +EHY 
Sbjct: 498 ANMAVRLLYEMQLAGISPDPISFTAALSASSHARQVEDGARIFYAISRDYGLIPSVEHYG 557

Query: 586 SMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPE 645
           ++V LLGRAG L++A   +  +        W ALLGAC IH + +    +A+ I+  +P 
Sbjct: 558 AVVDLLGRAGWLEEAEGFLRSMAIAADAAAWMALLGACRIHKDQDRAMRAAEAIVAIDPS 617

Query: 646 DEATHVLLSNIYAMARSWEKA-----------ASKEPGLSWIENQGMVHYFRAGDTSHAD 694
             A++ +LSN+Y+ A  W++A           A KEPG SWIE +  VH F   D SH  
Sbjct: 618 HGASYTVLSNVYSAAGRWDEAEEIRRRMSENGARKEPGRSWIEVKNRVHEFAVKDRSHPR 677

Query: 695 MNIIRGMLEWLN--MKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPP 752
              I   L+ L   +KS +  Y+PD+ +VL DV ++ +E  LW HSEKLAL F L     
Sbjct: 678 TGEIYERLDELRVVLKSEE-DYVPDVGSVLHDVEDEHRENLLWHHSEKLALGFGLIGTKE 736

Query: 753 SSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            S I IIKNLRIC DCH  +K+ SK  +REI++RD +RFHHF  G CSC D W
Sbjct: 737 GSKITIIKNLRICEDCHVVMKLTSKNTKREIVVRDCYRFHHFNGGACSCSDCW 789



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 6/181 (3%)

Query: 441 PATEV-TYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR 499
           PA  V ++  + R      +LE G ++H   +++ Y   + ++N L+ MYA+  S  DA 
Sbjct: 8   PAAPVDSWRDLARLVDESTSLEQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAE 67

Query: 500 LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGG 559
           L+ D M   N +SWNA+I   +  G     L  F  M Q G  P+ + F+ ++ A     
Sbjct: 68  LLLDRMPRRNALSWNAVIRANAQAGDFPRSLLFFQRMLQDGSLPDAVVFLSLIKAPRT-- 125

Query: 560 LLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRAL 619
            +++GE   +      G +      T+++ + GR G LD+A    + I  +  V+ W AL
Sbjct: 126 -IQEGE-IVQEFAEKSGFDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQ-ERGVVSWNAL 182

Query: 620 L 620
           +
Sbjct: 183 I 183



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 50/224 (22%), Positives = 84/224 (37%), Gaps = 40/224 (17%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           ++   L++C   DDL+   +IH  V   G   DL     L+++Y +  RL  A ++F  +
Sbjct: 313 TFVNVLEACDCPDDLERGESIHRDVRAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAI 372

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGL---FSTLHREGHELNPFAFTAFLKVLVSMG--- 171
                I+    I  +   +QF  A G    F  + + G   + F   A L    + G   
Sbjct: 373 QHPGVITLNAIIAAH---AQFGRADGSLLHFRQMLQLGIRPSKFTLVAVLGACATSGAAA 429

Query: 172 --------WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD------- 216
                   W   CP    C        +  V  AL++ ++ CG ++ AR +FD       
Sbjct: 430 SAGRDLHRWMAECPG--DC-----DPHDILVRNALVNMYAKCGDLDAARGIFDAAPQGNV 482

Query: 217 --------GLFNDCFEE-ALNFFSQMRAVGFKPNNFTFAFVLKA 251
                   G     +   A+    +M+  G  P+  +F   L A
Sbjct: 483 STWNAIMAGYAQHGYANMAVRLLYEMQLAGISPDPISFTAALSA 526


>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
 gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
          Length = 653

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 220/598 (36%), Positives = 351/598 (58%), Gaps = 17/598 (2%)

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           E+L  FS+M   G KPN+FTF+  LKAC  L+ + + +  H   +KT ++M   V  +++
Sbjct: 56  ESLLLFSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSII 115

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
           D+Y+K G I+ A  +FE MP +++I W+ MIA Y        A+ LF +M++     ++F
Sbjct: 116 DMYSKCGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEF 175

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDV--FVSNALMDVYAKCGRMENSVELFA 402
           TF S L+AC+ +  +  GNQIH+ ++  G L  V   V+ AL+D+Y KCG++  +  +F+
Sbjct: 176 TFTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFS 235

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
              +++ ++W  +I+GY Q G + ++M +F ++ E  +       SS++   A  A ++ 
Sbjct: 236 HIEEKHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQ 295

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G Q+H   +K    +D+ V N+++DMY KCG I +A  +F  M   N +SW  MI+GY  
Sbjct: 296 GKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGK 355

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
           HGL  E +++FD MQ     P+++T++ VL  CS+ GL+E+G+ YF  + + +GI+  +E
Sbjct: 356 HGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVE 415

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDF 642
           HY  MV LLGRAG L +A  L++ +P + +V IW+ LL AC +H ++E+G+     +L  
Sbjct: 416 HYACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRL 475

Query: 643 EPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTS 691
           + E+   +V++SNIYA A  W+           K   KE G SW+E    VH+F  GD +
Sbjct: 476 DSENPVNYVMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDT 535

Query: 692 HADMNIIRGMLEWLNMKSRKA-GYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALF-- 748
           H     I  +L+ +  + ++  GY+  +   L DV E+ K   L VHSEKLA+  AL   
Sbjct: 536 HPLTEKIHEILKEMERRMKEELGYVYGVKYALHDVEEESKMDNLRVHSEKLAIGLALVCG 595

Query: 749 -KMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
                   IR+ KNLR+C DCH  IK +SKI++   ++RD +RFH F+DG CSC D+W
Sbjct: 596 GLEEGRKVIRVFKNLRVCGDCHEFIKGLSKILRVVFVVRDANRFHRFEDGLCSCRDYW 653



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 134/459 (29%), Positives = 225/459 (49%), Gaps = 20/459 (4%)

Query: 86  GNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLF 145
           G   DL  +N L+ +Y K  RL  A  +FD M +RN +S+   + G+  +   +E++ LF
Sbjct: 2   GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61

Query: 146 STLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVC 205
           S +   G + N F F+  LK    +   ++   +     K G D    VG ++ID +S C
Sbjct: 62  SKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKC 121

Query: 206 GCVEFARKVFD---------------GLFNDCF-EEALNFFSQMRAVGFKPNNFTFAFVL 249
           G +  A  +F+               G     F E+AL  F +M+ VG   + FTF   L
Sbjct: 122 GRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTL 181

Query: 250 KACLGLDTIRVAKSAHGCALKT--CYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
           KAC  L  I+     H   +     Y ++  VA AL+DLY K G++  ARR+F  + +K 
Sbjct: 182 KACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKH 241

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
           VI W+ +I  YAQ     +++ELF ++R++ +  + F   S++   A    +  G Q+H+
Sbjct: 242 VISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHA 301

Query: 368 LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK 427
             ++V    D+ V N+++D+Y KCG +  +  LF+E P RN ++W  MI GY + G   +
Sbjct: 302 FAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKE 361

Query: 428 AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHC-LTVKANYDMDVVVANALI 486
           A+ +F +M  +     +VTY +VL  C+    +E G +    L         V     ++
Sbjct: 362 AIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMV 421

Query: 487 DMYAKCGSITDARLVFDMMN-DWNEVSWNAMISGYSMHG 524
           D+  + G + +A+ + D M  + N   W  ++S   +HG
Sbjct: 422 DLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHG 460



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 113/422 (26%), Positives = 199/422 (47%), Gaps = 30/422 (7%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +++T+L++C   + L     IH   +K G  +     N ++++Y K  R+ +A  +F
Sbjct: 72  NDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMF 131

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           + MP RN IS+   I GYTV+    +A+ LF  +   G  L+ F FT+ LK    +G  +
Sbjct: 132 EVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIK 191

Query: 175 LCPCVFACVYKLG--HDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND----------- 221
               + A +   G  +  N  V  ALID +  CG +  AR+VF  +              
Sbjct: 192 EGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILG 251

Query: 222 -----CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
                   E++  F Q+R    + + F  + ++        ++  K  H  A+K    +D
Sbjct: 252 YAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVD 311

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           + V  ++LD+Y K G I+ A R+F EMP ++VI W+ MI  Y +  L  +A+ LF  M+ 
Sbjct: 312 ISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQL 371

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHS-LVVRVGLLSDVFVSNALMDVYAKCGRME 395
               P+  T+++VL  C+    ++ G +  S L    G+ + V     ++D+  + GR++
Sbjct: 372 DSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLK 431

Query: 396 NSVELFAESPKRNHV-TWNTMIV-----GYVQLG-EVGKAMIMFSKMLEEQVPATEVTYS 448
            +  L    P   +V  W T++      G ++LG EVG  ++     L+ + P   V  S
Sbjct: 432 EAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILL----RLDSENPVNYVMMS 487

Query: 449 SV 450
           ++
Sbjct: 488 NI 489


>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 218/578 (37%), Positives = 346/578 (59%), Gaps = 12/578 (2%)

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           P+ FTF  +LK C  L   +V K  HG  +K     DLY+   LL++Y   G++ +AR +
Sbjct: 77  PDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFL 136

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL 359
           FE M  ++ + W+ MI+ Y +     +A+ L+ +M +   +P++ T  +++ ACA ++ L
Sbjct: 137 FERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDL 196

Query: 360 DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGY 419
            +G ++HS +  + +     + +AL+++YAKCG ++ + ++F +   ++   W+ +I GY
Sbjct: 197 GVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGY 256

Query: 420 VQLGEVGKAMIMFSKMLE-EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           V+     +A+ +F ++     +   EVT  +V+ ACA L  LE G  VH    +      
Sbjct: 257 VKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHS 316

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
           V + N+LIDM++KCG I  A+ +FD M+  + +SWN+M++G ++HGL  E L  F LMQ 
Sbjct: 317 VSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQT 376

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLD 598
              +P+ +TF+GVL+ACS+ GL+++G+  F  + A YG+    EHY  MV LL RAG L 
Sbjct: 377 TDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLA 436

Query: 599 KAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYA 658
           +A + I  +P QP   IW ++LGAC ++NN+E+G  +A+ +L+ EP ++  ++LLSNIYA
Sbjct: 437 EAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYA 496

Query: 659 MARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNM 707
             + W           EK   K PG S +    + H F AGD SH ++  I  ML  +  
Sbjct: 497 RRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVRE 556

Query: 708 KSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVD 767
           K +  GY+ D S VL ++ +++KE  +  HSEKLAL + L K      I I+KNLR+C D
Sbjct: 557 KLKLVGYVADTSEVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSD 616

Query: 768 CHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           CHT IK++SKI QR+I +RD +RFHHF+DG CSC D+W
Sbjct: 617 CHTLIKLVSKIYQRQITLRDRNRFHHFKDGSCSCRDYW 654



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 200/366 (54%), Gaps = 13/366 (3%)

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQ 351
           +  A  +F      DV+ W+ M+  +  +++   A++ +  M  ++   P++FTF S+L+
Sbjct: 28  VGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLK 87

Query: 352 ACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
            CA +    +G  +H  VV+  L SD+++   L+++YA CG ++++  LF     RN V 
Sbjct: 88  GCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVV 147

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
           W +MI GY++     +A++++ KM E+     EVT ++++ ACA L  L  GM++H    
Sbjct: 148 WTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIR 207

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
           + +  +  V+ +AL++MYAKCG +  AR VFD ++D +  +W+A+I GY  +  S E L+
Sbjct: 208 EMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQ 267

Query: 532 VF-DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSL 590
           +F ++      RPN +T + V+SAC+  G LE G  +    +        +    S++ +
Sbjct: 268 LFREVAGGSNMRPNEVTILAVISACAQLGDLETGR-WVHDYITRTQKGHSVSLNNSLIDM 326

Query: 591 LGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGR--LSAQHIL---DFEPE 645
             + G +D A ++ + + ++  ++ W +++    +H    +GR  L+  H++   D +P 
Sbjct: 327 FSKCGDIDAAKRIFDSMSYK-DLISWNSMVNGLALHG---LGREALAQFHLMQTTDLQP- 381

Query: 646 DEATHV 651
           DE T +
Sbjct: 382 DEITFI 387



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 107/440 (24%), Positives = 203/440 (46%), Gaps = 58/440 (13%)

Query: 89  LDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTL 148
           LD+   N +L  +V  N           MP R        +Q YT              L
Sbjct: 41  LDVLTWNSMLRAFVNSN-----------MPRR-------ALQSYT------------EML 70

Query: 149 HREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCV 208
            R  +  + F F + LK    +   ++   +   V K    S+ ++ T L++ ++ CG +
Sbjct: 71  ERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDL 130

Query: 209 EFARKVFDGLF----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKAC 252
           + AR +F+ +                 N C  EAL  + +M   GF P+  T A ++ AC
Sbjct: 131 KSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSAC 190

Query: 253 LGLDTIRVAKSAHGCALKTCYEMDLYVAV----ALLDLYTKSGEISNARRIFEEMPKKDV 308
             L  + V    H        EMD+ +      AL+++Y K G++  AR++F+++  KDV
Sbjct: 191 AELKDLGVGMKLHS----HIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDV 246

Query: 309 IPWSFMIARYAQTDLSIDAVELFCRMRQAF-VAPNQFTFVSVLQACATMEGLDLGNQIHS 367
             WS +I  Y + + S +A++LF  +     + PN+ T ++V+ ACA +  L+ G  +H 
Sbjct: 247 YAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHD 306

Query: 368 LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK 427
            + R      V ++N+L+D+++KCG ++ +  +F     ++ ++WN+M+ G    G   +
Sbjct: 307 YITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGRE 366

Query: 428 AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--AL 485
           A+  F  M    +   E+T+  VL AC+    ++ G ++    ++A Y + +   +   +
Sbjct: 367 ALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLF-YEIEALYGVRLKSEHYGCM 425

Query: 486 IDMYAKCGSITDARLVFDMM 505
           +D+  + G + +AR    +M
Sbjct: 426 VDLLCRAGLLAEAREFIRVM 445



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 103/426 (24%), Positives = 188/426 (44%), Gaps = 35/426 (8%)

Query: 15  LTHQSKINAWLRGLSAQAALS--TQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDL 72
           LT  S + A++     + AL   T+    S   P  F+        + + L+ C    + 
Sbjct: 44  LTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFT--------FPSLLKGCALLLEF 95

Query: 73  QTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGY 132
           +    +H QV+K     DL+    LLN+Y     L  A  LF+ M  RN + + + I GY
Sbjct: 96  KVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGY 155

Query: 133 TVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNA 192
             +    EA+ L+  +  +G   +       +     +    +   + + + ++     A
Sbjct: 156 MKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICA 215

Query: 193 FVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMR-A 235
            +G+AL++ ++ CG ++ AR+VFD L                 N+   EAL  F ++   
Sbjct: 216 VLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGG 275

Query: 236 VGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISN 295
              +PN  T   V+ AC  L  +   +  H    +T     + +  +L+D+++K G+I  
Sbjct: 276 SNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDA 335

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA- 354
           A+RIF+ M  KD+I W+ M+   A   L  +A+  F  M+   + P++ TF+ VL AC+ 
Sbjct: 336 AKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSH 395

Query: 355 ---TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHV 410
                EG  L  +I +L   V L S+ +    ++D+  + G +  + E     P + +  
Sbjct: 396 AGLVQEGKKLFYEIEAL-YGVRLKSEHY--GCMVDLLCRAGLLAEAREFIRVMPLQPDGA 452

Query: 411 TWNTMI 416
            W +M+
Sbjct: 453 IWGSML 458


>gi|115483184|ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
 gi|78708963|gb|ABB47938.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
 gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa Japonica Group]
 gi|125575555|gb|EAZ16839.1| hypothetical protein OsJ_32311 [Oryza sativa Japonica Group]
 gi|215704329|dbj|BAG93763.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 681

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 213/578 (36%), Positives = 338/578 (58%), Gaps = 12/578 (2%)

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
           +P++ TF   L AC  L  +R  +S    A    Y+ D++V  +LL LY + G + +A +
Sbjct: 105 RPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVK 164

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           +F  MP++D + WS M+A +      +DA++++ RMR+  V  ++   + V+QAC     
Sbjct: 165 VFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARN 224

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           + +G  +H  ++R G+  DV  + +L+D+YAK G ++ +  +F     RN V+W+ MI G
Sbjct: 225 VRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISG 284

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           + Q G+  +A+ +F  M    +        S L AC+++  L+ G  VH   V+  +D +
Sbjct: 285 FAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVR-RFDFN 343

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
            ++  A IDMY+KCGS+  A+++F+M++D + + WNAMI+    HG   + L +F  M +
Sbjct: 344 CILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNE 403

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLD 598
            G RP++ TF  +LSA S+ GL+E+G+ +F  MV ++ I P  +HY  +V LL R+G ++
Sbjct: 404 TGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVE 463

Query: 599 KAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYA 658
           +A+ L+  +  +P+V IW ALL  C+ +  +E+G   A +IL+ +P+D     L+SN+YA
Sbjct: 464 EASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYA 523

Query: 659 MARSWEK-----------AASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNM 707
             + W+K            + K PG S IE +G  H F   D SH     I   +  L++
Sbjct: 524 ATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKLDL 583

Query: 708 KSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVD 767
           + RK GYIP    V  D+ E+ KE+ L  HSE+LA+AF L    P + + IIKNLR+C D
Sbjct: 584 EMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGD 643

Query: 768 CHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           CH AIK ISKI  REI++RD  RFHHF+DG CSC D+W
Sbjct: 644 CHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 146/302 (48%), Gaps = 13/302 (4%)

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           +A+  + +MR  G K +      V++AC     +R+  S HG  L+    MD+  A +L+
Sbjct: 192 DAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLV 251

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
           D+Y K+G +  A R+F  M  ++ + WS MI+ +AQ   S +A+ LF  M+ + + P+  
Sbjct: 252 DMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSG 311

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
             VS L AC+ +  L LG  +H  +VR     +  +  A +D+Y+KCG + ++  LF   
Sbjct: 312 ALVSALLACSNIGFLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNMI 370

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG- 463
             R+ + WN MI      G    A+ +F +M E  +     T++S+L A +    +E G 
Sbjct: 371 SDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGK 430

Query: 464 -----MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS-WNAMI 517
                M  H     A           L+D+ A+ G + +A  +   M     V+ W A++
Sbjct: 431 LWFGRMVNHFKITPAEKHY-----VCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALL 485

Query: 518 SG 519
           SG
Sbjct: 486 SG 487



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 106/470 (22%), Positives = 207/470 (44%), Gaps = 53/470 (11%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +S ++  +L +C +  DL+   ++  +    G   D+F  + LL++Y +   + DA K+F
Sbjct: 107 DSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVF 166

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             MP R+ +++ T + G+  + Q ++A+ ++  +  +G + +       ++   +     
Sbjct: 167 VRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVR 226

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
           +   V   + + G   +    T+L+D ++  G ++ A +VF GL                
Sbjct: 227 MGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVF-GLMVHRNDVSWSAMISGF 285

Query: 220 --NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
             N   +EAL  F  M+A G +P++      L AC  +  +++ +S HG  ++  ++ + 
Sbjct: 286 AQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR-FDFNC 344

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
            +  A +D+Y+K G +++A+ +F  +  +D+I W+ MIA         DA+ LF  M + 
Sbjct: 345 ILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNET 404

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            + P+  TF S+L A +           HS +V  G L                GRM N 
Sbjct: 405 GMRPDHATFASLLSALS-----------HSGLVEEGKLW--------------FGRMVNH 439

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
              F  +P   H  +  ++    + G V +A  + + M  E    T   + ++L  C + 
Sbjct: 440 ---FKITPAEKH--YVCLVDLLARSGLVEEASDLLTSMKAE---PTVAIWVALLSGCLNN 491

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND 507
             LE G  +    ++   D DV V   + ++YA        R V  +M D
Sbjct: 492 KKLELGESIADNILELQPD-DVGVLALVSNLYAATKKWDKVRQVRKLMKD 540


>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Brachypodium distachyon]
          Length = 804

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 244/721 (33%), Positives = 374/721 (51%), Gaps = 106/721 (14%)

Query: 189 DSNAFVGTALIDAFSVCGCVEFARKVFDG---------LFNDCFE---------EALNFF 230
           D      T+L+ A++V G +  +   FD          L N              A++ F
Sbjct: 86  DPGPVAATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVF 145

Query: 231 SQMRAV--GFKPNNFTFAFVLKACLGLDTIRVAKSA--HGCALKTCYEMDLYVAVALLDL 286
             + A     +P++++F  +L A   +  + V+     H    K      L V+ AL+ L
Sbjct: 146 RSLLASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIAL 205

Query: 287 YTK---SGEISNARRIFEEMPKKDVIPWSF------------------------------ 313
           Y K    G   +AR++ +EMP+KD + W+                               
Sbjct: 206 YMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWN 265

Query: 314 -MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV 372
            MI+ Y Q+ +  +A ELF RM    + P++FTF S+L ACA       G  +H   +R 
Sbjct: 266 AMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIR- 324

Query: 373 GLLSDVF------VSNALMDVYAKCGR-------------------------------ME 395
            L  D        V+NAL+ +Y+K G+                               ++
Sbjct: 325 -LQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLD 383

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
           N+  +F E P ++ ++W  M+ GYV  G    A+ +F++M  E V   + TY+  + AC 
Sbjct: 384 NAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACG 443

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
            L AL+ G Q+H   V+  ++      NAL+ MYA+CG++ DARLVF +M + + VSWNA
Sbjct: 444 ELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNA 503

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           MIS    HG   E L++FD M  +G  P+ ++F+ +L+AC++ GL++ G  YF+SM  ++
Sbjct: 504 MISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDF 563

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS 635
           GI P  +HY  ++ LLGRAG + +A  LI+ +PF+P+  IW A+L  C I+ ++E+G  +
Sbjct: 564 GISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYA 623

Query: 636 AQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHY 684
           A  +    PE + T++LLSN Y+ A  W  AA            KEPG SWIE    VH 
Sbjct: 624 ADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGNKVHV 683

Query: 685 FRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALA 744
           F  GDT H D + +   LE +  K RK GY+PD    L+D+   EKE  L+ HSE+LA++
Sbjct: 684 FLVGDTKHPDAHEVYRFLEMVGAKMRKLGYVPDTKFALQDMAPHEKEYVLFAHSERLAVS 743

Query: 745 FALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
           F L K+P  + + ++KNL+IC DCHTA+  +S+ V REI++RDV RFHHF+DG CSCG++
Sbjct: 744 FGLLKLPAGATVTVLKNLKICGDCHTAMMFMSRAVGREIVVRDVRRFHHFKDGECSCGNY 803

Query: 805 W 805
           W
Sbjct: 804 W 804



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 141/637 (22%), Positives = 241/637 (37%), Gaps = 152/637 (23%)

Query: 17  HQSKINAWLRGLSAQAALSTQQ---CSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQ 73
           H + I+A+ R   A  A+S  +    S+ +  P        + +S+ + L +  Q  DL 
Sbjct: 125 HNAMISAFARASLAAPAVSVFRSLLASDDSLRP--------DDYSFTSLLSAVGQMHDLA 176

Query: 74  TA--MTIHCQVLKKGNCLDLFATNVLLNVYVKLNR---LPDATKLFDEMPERNTISFVTT 128
            +    +HC V K G    L  +N L+ +Y+K +      DA K+ DEMPE++ +++ T 
Sbjct: 177 VSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTI 236

Query: 129 -------------------------------IQGYTVSSQFVEAVGLFSTLHREGHELNP 157
                                          I GY  S    EA  LF  +  +    + 
Sbjct: 237 VVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDE 296

Query: 158 FAFTAFLKVLVSMGWAELCPCVFACVYKLGHD----SNAFVGTALIDAFSVCGCVEFARK 213
           F FT+ L    + G+      V     +L  D    +   V  AL+  +S  G +  A K
Sbjct: 297 FTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATK 356

Query: 214 VFDGLF----------------NDCF-------------------------------EEA 226
           +FD +                 + C                                E+A
Sbjct: 357 IFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDA 416

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           L  F+QMR+   KP ++T+A  + AC  L  ++  K  H   ++  +E       ALL +
Sbjct: 417 LKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTM 476

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y + G + +AR +F  MP  D + W+ MI+   Q     +A+ELF +M    + P++ +F
Sbjct: 477 YARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISF 536

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
           +++L AC                   GL+ D F               E+    F  SP 
Sbjct: 537 LTILTACN----------------HAGLVDDGF------------QYFESMERDFGISPG 568

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
            +H      ++G  + G +G+A  +   M  E  PA    + ++L  C     +E G   
Sbjct: 569 EDHYARLIDLLG--RAGRIGEARDLIKTMPFEPTPA---IWEAILSGCRINGDMELGAYA 623

Query: 467 --HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND----------WNEVS-- 512
                 +   +D   ++   L + Y+  G   DA  V  +M D          W EV   
Sbjct: 624 ADQLFKMVPEHDGTYIL---LSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGNK 680

Query: 513 WNAMISGYSMHGLSAEVLKVFDL----MQQRGWRPNN 545
            +  + G + H  + EV +  ++    M++ G+ P+ 
Sbjct: 681 VHVFLVGDTKHPDAHEVYRFLEMVGAKMRKLGYVPDT 717


>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 637

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 237/579 (40%), Positives = 341/579 (58%), Gaps = 13/579 (2%)

Query: 240 PNNFT-FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
           PN++  +  VL++C+   ++   +  HG  L +    D  +A  L+DLY   G + +ARR
Sbjct: 59  PNSYHHYTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARR 118

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           +F+ MPK++V  W+ +I  YA+      A++L+  M    V P+ FT+   L+ACA +  
Sbjct: 119 LFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLD 178

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           L+ G ++H  V+      D+FV   L+D+YAKCG ++++  +F     R+ V WN+MI  
Sbjct: 179 LETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAA 238

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           Y Q G   +A+ +   M    V  T  T  S + A A  AAL  G ++H    +  +D  
Sbjct: 239 YGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQ 298

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
             +  +L+DMYAK G +  AR++F+ +     VSWNAMI GY MHG   E LK+F+ M+ 
Sbjct: 299 DKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRV 358

Query: 539 RGW-RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHL 597
                P+N+TFVGVLSAC++GG++++ + +F  MV  Y I+P ++H+T +V +LG AG  
Sbjct: 359 EAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRF 418

Query: 598 DKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIY 657
           ++A  LI+G+P QP   IW ALL  C IH NVE+G L+ Q +++ EPED   +VLLSNIY
Sbjct: 419 EEAYDLIKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVLLSNIY 478

Query: 658 AMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLN 706
           A +  WEKAA            K  G SWIE +G  H F  GD SH     I   LE L 
Sbjct: 479 AQSGKWEKAARVRKLMTNRGLKKIIGCSWIELKGKTHGFLVGDASHPRSAEIYEELERLE 538

Query: 707 MKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICV 766
                AGY+PD   V  DV +DEK   +  HSE+LA+AF L   P  + + + KNLR+C 
Sbjct: 539 GLMSDAGYMPDTMPVFHDVGDDEKRNMMRSHSERLAIAFGLISTPSGTKLLVTKNLRVCE 598

Query: 767 DCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           DCH  IK+IS+IVQREIIIRDV+R+HHF +G CSC D+W
Sbjct: 599 DCHVVIKLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 172/361 (47%), Gaps = 23/361 (6%)

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEA 226
           V  LG D+   + T L+D ++ CG V  AR++FDG+                 +   E A
Sbjct: 90  VSGLGPDT--VLATKLVDLYAACGLVGHARRLFDGMPKRNVFLWNVLIRAYARDGPHEVA 147

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           +  +  M   G +P+NFT+   LKAC  L  +   +  H   L T +  D++V   L+D+
Sbjct: 148 IQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREVHERVLGTHWGEDMFVCAGLVDM 207

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y K G + +AR +F+ +  +D + W+ MIA Y Q    ++A+ L   M    V P   T 
Sbjct: 208 YAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGRPMEALSLCRDMAANGVGPTIATL 267

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
           VS + A A    L  G ++H    R G      +  +L+D+YAK G ++ +  LF +  K
Sbjct: 268 VSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMK 327

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKM-LEEQVPATEVTYSSVLRACASLAALEPGMQ 465
           R  V+WN MI GY   G   +A+ +F+KM +E QV    +T+  VL AC     ++   +
Sbjct: 328 RELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTPDNITFVGVLSACNHGGMVKEAKE 387

Query: 466 VHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSM 522
              L V   Y +   V +   L+D+    G   +A  L+  M    +   W A+++G  +
Sbjct: 388 FFGLMVDV-YSIKPTVQHFTCLVDVLGHAGRFEEAYDLIKGMPMQPDSGIWGALLNGCKI 446

Query: 523 H 523
           H
Sbjct: 447 H 447



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 174/399 (43%), Gaps = 36/399 (9%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
           H Y + LQSC+ +  L T   +H ++L  G   D      L+++Y     +  A +LFD 
Sbjct: 63  HHYTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDG 122

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
           MP+RN   +   I+ Y        A+ L+  +   G E + F +   LK   ++   E  
Sbjct: 123 MPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETG 182

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------N 220
             V   V       + FV   L+D ++ CGCV+ AR VFD +                 N
Sbjct: 183 REVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQN 242

Query: 221 DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
               EAL+    M A G  P   T    + A      +   +  HG   +  ++    + 
Sbjct: 243 GRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLK 302

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR-QAFV 339
            +L+D+Y KSG +  AR +FE++ K++++ W+ MI  Y       +A++LF +MR +A V
Sbjct: 303 TSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQV 362

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNA-------LMDVYAKCG 392
            P+  TFV VL AC      + G  +       GL+ DV+           L+DV    G
Sbjct: 363 TPDNITFVGVLSAC------NHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAG 416

Query: 393 RMENSVELFAESP-KRNHVTWNTMIVG-----YVQLGEV 425
           R E + +L    P + +   W  ++ G      V+LGE+
Sbjct: 417 RFEEAYDLIKGMPMQPDSGIWGALLNGCKIHKNVELGEL 455


>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Vitis vinifera]
          Length = 610

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 224/605 (37%), Positives = 347/605 (57%), Gaps = 44/605 (7%)

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
             + L+AC    +  + K  H   +KT  +    ++  L+++Y K G I +A  +F ++P
Sbjct: 6   LVYQLQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLP 65

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQACATMEGLDLGN 363
            +D I W+ ++    Q +L    + +F  M +Q  + P+ + F  +++ACA +  +  G 
Sbjct: 66  HRDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGK 125

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCG------------------------------- 392
           Q+H+  +   +  D  V ++L+D+YAKCG                               
Sbjct: 126 QVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSG 185

Query: 393 RMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATE-VTYSSVL 451
           R  ++++LF + P +N ++W  +I G VQ G    +  +F +M  + +   +    SS++
Sbjct: 186 RKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSII 245

Query: 452 RACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEV 511
            A A+LA L  G Q+HCL +   Y+  + V+NAL+DMYAKC  +  A+ +F  M   + V
Sbjct: 246 GASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIV 305

Query: 512 SWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSM 571
           SW ++I G + HGL+ E L +++ M   G +PN +TFVG++ ACS+ GL+ +G  +F SM
Sbjct: 306 SWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSM 365

Query: 572 VANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEI 631
           + +YGI P ++HYT ++ LL R+GHL++A  LI+ +PF+P    W ALL AC  H N  I
Sbjct: 366 IKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHHRNTLI 425

Query: 632 GRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQG 680
           G   A H+L  +PED +T++LLSNIYA A  WE  +            KEPG S I    
Sbjct: 426 GIRVADHLLSLKPEDPSTYILLSNIYASAAMWESVSKVRRLMAAMEVKKEPGYSCIVLGK 485

Query: 681 MVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEK 740
               F AG+TSH     I G+LE L+ + +K GYIPD S+VL D+ + EKER L+ HSE+
Sbjct: 486 ESQVFLAGETSHPAKEEIFGLLEELDAEMKKRGYIPDTSSVLHDLEQQEKERQLFWHSER 545

Query: 741 LALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCS 800
           LA+A+ L K  P   + I+KNLR+C DCHT +K IS IV+REI++RD +R+HHF+DG CS
Sbjct: 546 LAVAYGLLKGIPGMVLHIVKNLRVCGDCHTVLKFISIIVKREIVVRDANRYHHFKDGKCS 605

Query: 801 CGDFW 805
           C +FW
Sbjct: 606 CNNFW 610



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 187/393 (47%), Gaps = 53/393 (13%)

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-FNDCFEEA--------------- 226
           + K G D    +   LI+ +  CG ++ A  +F+ L   D    A               
Sbjct: 29  IIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDPISWASILTANNQANLPHLT 88

Query: 227 LNFFSQM-RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           L+ F  M +  G +P+++ FA ++KAC  L  ++  K  H   + +    D  V  +L+D
Sbjct: 89  LSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVD 148

Query: 286 LYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM----------- 334
           +Y K G     R +F+ +  K+ I W+ MI+ YAQ+   +DA++LF +M           
Sbjct: 149 MYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTAL 208

Query: 335 ---------------------RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
                                 +     + F   S++ A A +  L LG QIH LV+ +G
Sbjct: 209 ISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLG 268

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
             S +FVSNAL+D+YAKC  +  + ++F    +R+ V+W ++IVG  Q G   +A+ +++
Sbjct: 269 YESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSLYN 328

Query: 434 KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAK 491
           +ML   +   EVT+  ++ AC+ +  +  G       +K +Y ++  + +   L+D+ ++
Sbjct: 329 RMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIK-DYGINPSLQHYTCLLDLLSR 387

Query: 492 CGSITDAR-LVFDMMNDWNEVSWNAMISGYSMH 523
            G + +A  L+  M    +E +W A++S  + H
Sbjct: 388 SGHLEEAENLIKAMPFKPDEATWAALLSACNHH 420



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/407 (22%), Positives = 180/407 (44%), Gaps = 55/407 (13%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKG--NCLDLFATNVLLNVYVKLNRLPDATKLFDEMPER 120
           LQ+C ++        +HC ++K G   C  L  +N L+N+Y K   + DA  LF+++P R
Sbjct: 10  LQACARHQSPPIGKKLHCHIIKTGIDQCKSL--SNNLINMYGKCGLIQDALNLFNQLPHR 67

Query: 121 NTISFVTTIQGYTVSSQFVEAVGLFSTLHRE-GHELNPFAFTAFLKVLVSMGWAELCPCV 179
           + IS+ + +     ++     + +F  + ++ G + + + F   +K    +G  +    V
Sbjct: 68  DPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQV 127

Query: 180 FACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN------------------- 220
            A         +  V ++L+D ++ CG  +  R VFD + +                   
Sbjct: 128 HATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRK 187

Query: 221 -DCFE---------------------------EALNFFSQMRAVGFK-PNNFTFAFVLKA 251
            D  +                           ++   F +MR+ G    + F  + ++ A
Sbjct: 188 LDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGA 247

Query: 252 CLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPW 311
              L  + + K  H   +   YE  L+V+ AL+D+Y K  ++  A++IF  M ++D++ W
Sbjct: 248 SANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSW 307

Query: 312 SFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ-IHSLVV 370
           + +I   AQ  L+ +A+ L+ RM    + PN+ TFV ++ AC+ +  +  G    +S++ 
Sbjct: 308 TSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIK 367

Query: 371 RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMI 416
             G+   +     L+D+ ++ G +E +  L    P K +  TW  ++
Sbjct: 368 DYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALL 414



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 133/283 (46%), Gaps = 26/283 (9%)

Query: 97  LLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHEL- 155
           +++ Y +  R  DA +LF +MP +N +S+   I G   S  +V++  LF  +  +G ++ 
Sbjct: 177 MISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIV 236

Query: 156 NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF 215
           +PF  ++ +    ++    L   +   V  LG++S+ FV  AL+D ++ C  V  A+K+F
Sbjct: 237 DPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIF 296

Query: 216 DGLF----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIR 259
             +                 +   EEAL+ +++M + G KPN  TF  ++ AC  +  + 
Sbjct: 297 GRMVQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVS 356

Query: 260 VAKSAHGCALKTCYEMD--LYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
             +      +K  Y ++  L     LLDL ++SG +  A  + + MP K D   W+ +++
Sbjct: 357 KGRYFFNSMIKD-YGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLS 415

Query: 317 ---RYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM 356
               +  T + I   +    ++     P+ +  +S + A A M
Sbjct: 416 ACNHHRNTLIGIRVADHLLSLKPE--DPSTYILLSNIYASAAM 456



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 101/237 (42%), Gaps = 31/237 (13%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           IHC V+  G    LF +N L+++Y K + +  A K+F  M +R+ +S+ + I G      
Sbjct: 260 IHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGL 319

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYK-LGHDSNAFVGT 196
             EA+ L++ +   G + N   F   +     +G        F  + K  G + +    T
Sbjct: 320 AEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYT 379

Query: 197 ALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKAC---- 252
            L+D  S  G +               EEA N    ++A+ FKP+  T+A +L AC    
Sbjct: 380 CLLDLLSRSGHL---------------EEAENL---IKAMPFKPDEATWAALLSACNHHR 421

Query: 253 LGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG---EISNARRIFEEMPKK 306
             L  IRVA   H  +LK     D    + L ++Y  +     +S  RR+   M  K
Sbjct: 422 NTLIGIRVAD--HLLSLKP---EDPSTYILLSNIYASAAMWESVSKVRRLMAAMEVK 473


>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
 gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
          Length = 659

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 240/650 (36%), Positives = 356/650 (54%), Gaps = 61/650 (9%)

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEA 226
           ++ L    N  +G  L+ +++ CG     RKVFD +                 N  +++ 
Sbjct: 44  IFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDG 103

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           L  F +M   GF+P+N+T+  VLKAC   + +R     HG  LK   + +L+V   L+ +
Sbjct: 104 LLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAM 163

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y K G +  ARR+F+EM  KDV+ W+ M+A YA      DA+E+   M      P+  T 
Sbjct: 164 YGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTM 223

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
            S++ A A     ++                         +Y +        ++F    +
Sbjct: 224 ASLMPAVANTSSENV-------------------------LYVE--------KIFVNLER 250

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
           +N ++WN MI  Y++     +A+ ++ +M + +V    +T++SVL AC  L+AL  G ++
Sbjct: 251 KNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRI 310

Query: 467 HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLS 526
           H    K     ++++ N+LIDMYA+CG + DA+ VFD M   +  SW ++IS Y M G  
Sbjct: 311 HEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQG 370

Query: 527 AEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTS 586
              + +F  M   G  P+++ FV +LSACS+ GLL++G  YFK M  +Y I P IEHY  
Sbjct: 371 CNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYAC 430

Query: 587 MVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPED 646
           +V LLGRAG +D+A  +I+ +P +P+  +W  LL +C +  N++IG L+A ++L   PE 
Sbjct: 431 LVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLSSCRVFTNMDIGILAADNLLQLAPEQ 490

Query: 647 EATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADM 695
              +VLLSNIYA A  W+           K   K PG+S +E    VH F AGDTSH   
Sbjct: 491 SGYYVLLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPGISNVELNNQVHTFLAGDTSHPQS 550

Query: 696 NIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSP 755
             I   L  L  K ++ GY+P+  + L DV E++KE +L VHSEKLA+ FAL        
Sbjct: 551 KEIYEELGVLVAKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTQEYQ- 609

Query: 756 IRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           IRI KNLR+C DCH A K+ISKIV+REII+RD +RFHHF+DG CSCGD+W
Sbjct: 610 IRITKNLRVCGDCHIAAKLISKIVEREIIVRDTNRFHHFKDGVCSCGDYW 659



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 117/475 (24%), Positives = 225/475 (47%), Gaps = 22/475 (4%)

Query: 47  ITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNR 106
           ITF + +  + S+    ++  QN D++T   +H  +    +  +      L+  Y     
Sbjct: 10  ITFFIQQILT-SFGLLAKALDQNPDIKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGE 68

Query: 107 LPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV 166
                K+FDEM +RN + +   I+ Y  + ++ + + +F  +   G   + + +   LK 
Sbjct: 69  PGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKA 128

Query: 167 LVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEA 226
                       +   V K+G D N FVG  LI  +  CGC+  AR+VFD +    +++ 
Sbjct: 129 CSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMI---WKDV 185

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           +++ S    V    +N  F   L+ C  ++     +   GC + +     L  AVA    
Sbjct: 186 VSWNSM---VAGYAHNMRFDDALEICREMED--YGQKPDGCTMAS-----LMPAVA---- 231

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
            T S  +    +IF  + +K++I W+ MI  Y +  L   AV+L+ +M +  V P+  TF
Sbjct: 232 NTSSENVLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITF 291

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
            SVL AC  +  L LG +IH  V +  L  ++ + N+L+D+YA+CG ++++  +F     
Sbjct: 292 ASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKF 351

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
           R+  +W ++I  Y   G+   A+ +F++ML        + + ++L AC+    L+ G ++
Sbjct: 352 RDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEG-RI 410

Query: 467 HCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMIS 518
           +   +  +Y +   + +   L+D+  + G + +A  ++  M  + NE  W  ++S
Sbjct: 411 YFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLS 465



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/328 (24%), Positives = 152/328 (46%), Gaps = 9/328 (2%)

Query: 331 FCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAK 390
            C++   F+     +F  + +A      +    ++H+++  +    +  +   LM  YA 
Sbjct: 6   ICKIITFFIQQILTSFGLLAKALDQNPDIKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAA 65

Query: 391 CGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
           CG    + ++F E   RN V +N MI  YV        +++F +M+         TY  V
Sbjct: 66  CGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCV 125

Query: 451 LRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE 510
           L+AC+    L  G+ +H   +K   D ++ V N LI MY KCG + +AR VFD M   + 
Sbjct: 126 LKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDV 185

Query: 511 VSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKS 570
           VSWN+M++GY+ +    + L++   M+  G +P+  T   ++ A +N     +   Y + 
Sbjct: 186 VSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTS--SENVLYVEK 243

Query: 571 MVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKL---IEGIPFQPSVMIWRALLGACIIHN 627
           +  N   +  I  +  M+ +  +     +A  L   +E    +P  + + ++L AC   +
Sbjct: 244 IFVNLERKNLIS-WNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLS 302

Query: 628 NVEIGRLSAQHILDFEPEDEATHVLLSN 655
            + +GR   +++   E +    ++LL N
Sbjct: 303 ALLLGRRIHEYV---EKKKLCPNLLLEN 327



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 104/257 (40%), Gaps = 20/257 (7%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E ++ ++A+ L +C     L     IH  V KK  C +L   N L+++Y +   L DA +
Sbjct: 285 EPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKR 344

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +FD M  R+  S+ + I  Y ++ Q   AV LF+ +   G   +  AF A L        
Sbjct: 345 VFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILS------- 397

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN-DCFEEALNFFS 231
                   AC +    D        + D + +   +E    + D L      +EA N   
Sbjct: 398 --------ACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIK 449

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
           QM     +PN   +A +L +C     + +   A    L+   E   Y  V L ++Y K+G
Sbjct: 450 QM---PIEPNERVWATLLSSCRVFTNMDIGILAADNLLQLAPEQSGYY-VLLSNIYAKAG 505

Query: 292 EISNARRIFEEMPKKDV 308
                  I   M +K +
Sbjct: 506 RWKEVTEIRSVMKRKKI 522


>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g15130
 gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 231/681 (33%), Positives = 372/681 (54%), Gaps = 35/681 (5%)

Query: 160 FTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL- 218
             + L+V    G ++    V   + K G   N      LID +  C     A KVFD + 
Sbjct: 9   LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68

Query: 219 ---------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKS 263
                           N   + +L+ FS+M   G  PN FTF+  LKAC  L+ +     
Sbjct: 69  ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128

Query: 264 AHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDL 323
            HG  LK  +EM + V  +L+D+Y+K G I+ A ++F  +  + +I W+ MIA +     
Sbjct: 129 IHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGY 188

Query: 324 SIDAVELFCRMRQAFVA--PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL--LSDVF 379
              A++ F  M++A +   P++FT  S+L+AC++   +  G QIH  +VR G    S   
Sbjct: 189 GSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSAT 248

Query: 380 VSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ 439
           ++ +L+D+Y KCG + ++ + F +  ++  ++W+++I+GY Q GE  +AM +F ++ E  
Sbjct: 249 ITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELN 308

Query: 440 VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR 499
                   SS++   A  A L  G Q+  L VK    ++  V N+++DMY KCG + +A 
Sbjct: 309 SQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAE 368

Query: 500 LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGG 559
             F  M   + +SW  +I+GY  HGL  + +++F  M +    P+ + ++ VLSACS+ G
Sbjct: 369 KCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSG 428

Query: 560 LLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRAL 619
           ++++GE  F  ++  +GI+P +EHY  +V LLGRAG L +A  LI+ +P +P+V IW+ L
Sbjct: 429 MIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTL 488

Query: 620 LGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAAS 668
           L  C +H ++E+G+   + +L  + ++ A +V++SN+Y  A  W            K   
Sbjct: 489 LSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLK 548

Query: 669 KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKA-GYIPDLSAVLRDVRE 727
           KE G+SW+E +  VH+FR+G+ SH    +I+  L+    + R+  GY+  L   L D+ +
Sbjct: 549 KEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDD 608

Query: 728 DEKERYLWVHSEKLALAFALFKM---PPSSPIRIIKNLRICVDCHTAIKIISKIVQREII 784
           + KE  L  HSEKLA+  AL           IR+ KNLR+CVDCH  IK +SKI +   +
Sbjct: 609 ESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYV 668

Query: 785 IRDVHRFHHFQDGCCSCGDFW 805
           +RD  RFH F+DGCCSCGD+W
Sbjct: 669 VRDAVRFHSFEDGCCSCGDYW 689



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 136/496 (27%), Positives = 243/496 (48%), Gaps = 25/496 (5%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L+ C +         +HC +LK G+ L+L  +N L+++Y K      A K+FD MPERN 
Sbjct: 13  LRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNV 72

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +S+   + G+ ++     ++ LFS + R+G   N F F+  LK    +   E    +   
Sbjct: 73  VSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGF 132

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF----------------EEA 226
             K+G +    VG +L+D +S CG +  A KVF  + +                    +A
Sbjct: 133 CLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKA 192

Query: 227 LNFFSQMRAVGFK--PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE--MDLYVAVA 282
           L+ F  M+    K  P+ FT   +LKAC     I   K  HG  +++ +       +  +
Sbjct: 193 LDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGS 252

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+DLY K G + +AR+ F+++ +K +I WS +I  YAQ    ++A+ LF R+++     +
Sbjct: 253 LVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQID 312

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
            F   S++   A    L  G Q+ +L V++    +  V N+++D+Y KCG ++ + + FA
Sbjct: 313 SFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFA 372

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
           E   ++ ++W  +I GY + G   K++ +F +ML   +   EV Y +VL AC+    ++ 
Sbjct: 373 EMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKE 432

Query: 463 GMQVHCLTVKANYDMDVVVANA-LIDMYAKCGSITDARLVFDMMNDWNEVS-WNAMISGY 520
           G ++    ++ +     V   A ++D+  + G + +A+ + D M     V  W  ++S  
Sbjct: 433 GEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLC 492

Query: 521 SMHG---LSAEVLKVF 533
            +HG   L  EV K+ 
Sbjct: 493 RVHGDIELGKEVGKIL 508



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 98/285 (34%), Positives = 165/285 (57%), Gaps = 7/285 (2%)

Query: 341 PNQF-TFVSVLQACATMEGL-DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           PNQ    VS+L+ C T +GL D G Q+H  +++ G   ++  SN L+D+Y KC     + 
Sbjct: 3   PNQRQNLVSILRVC-TRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAY 61

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
           ++F   P+RN V+W+ ++ G+V  G++  ++ +FS+M  + +   E T+S+ L+AC  L 
Sbjct: 62  KVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLN 121

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           ALE G+Q+H   +K  ++M V V N+L+DMY+KCG I +A  VF  + D + +SWNAMI+
Sbjct: 122 ALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIA 181

Query: 519 GYSMHGLSAEVLKVFDLMQQRGW--RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           G+   G  ++ L  F +MQ+     RP+  T   +L ACS+ G++  G+     +V +  
Sbjct: 182 GFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGF 241

Query: 577 IEPCIEHYT-SMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
             P     T S+V L  + G+L  A K  + I  + +++ W +L+
Sbjct: 242 HCPSSATITGSLVDLYVKCGYLFSARKAFDQIK-EKTMISWSSLI 285



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 102/424 (24%), Positives = 198/424 (46%), Gaps = 32/424 (7%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +++T+L++C   + L+  + IH   LK G  + +   N L+++Y K  R+ +A K+F
Sbjct: 106 NEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVF 165

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNP--FAFTAFLKVLVSMGW 172
             + +R+ IS+   I G+  +    +A+  F  +     +  P  F  T+ LK   S G 
Sbjct: 166 RRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGM 225

Query: 173 AELCPCVFACVYKLGHD--SNAFVGTALIDAFSVCGCVEFARKVFDGLFNDC-------- 222
                 +   + + G    S+A +  +L+D +  CG +  ARK FD +            
Sbjct: 226 IYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLI 285

Query: 223 --------FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
                   F EA+  F +++ +  + ++F  + ++        +R  K     A+K    
Sbjct: 286 LGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSG 345

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
           ++  V  +++D+Y K G +  A + F EM  KDVI W+ +I  Y +  L   +V +F  M
Sbjct: 346 LETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEM 405

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV-GLLSDVFVSNALMDVYAKCGR 393
            +  + P++  +++VL AC+    +  G ++ S ++   G+   V     ++D+  + GR
Sbjct: 406 LRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGR 465

Query: 394 MENSVELFAESP-KRNHVTWNTMIV-----GYVQLG-EVGKAMIMFSKMLEEQVPATEVT 446
           ++ +  L    P K N   W T++      G ++LG EVGK ++     ++ + PA  V 
Sbjct: 466 LKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILL----RIDAKNPANYVM 521

Query: 447 YSSV 450
            S++
Sbjct: 522 MSNL 525



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 94/187 (50%), Gaps = 3/187 (1%)

Query: 440 VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR 499
           +P       S+LR C      + G QVHC  +K+   ++++ +N LIDMY KC     A 
Sbjct: 2   IPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAY 61

Query: 500 LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGG 559
            VFD M + N VSW+A++SG+ ++G     L +F  M ++G  PN  TF   L AC    
Sbjct: 62  KVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLN 121

Query: 560 LLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRAL 619
            LE+G           G E  +E   S+V +  + G +++A K+   I    S++ W A+
Sbjct: 122 ALEKG-LQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWNAM 179

Query: 620 LGACIIH 626
           + A  +H
Sbjct: 180 I-AGFVH 185


>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 577

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 224/578 (38%), Positives = 335/578 (57%), Gaps = 20/578 (3%)

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           P+  +F+ +L++C      ++ ++ H   +K  +E D+ +   LLD Y K G++  A+R+
Sbjct: 8   PSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAKRV 67

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL 359
           F  MP++DV+  + MI+  ++     +A  LF  M +     N  ++ S++     +  +
Sbjct: 68  FMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTER----NSCSWNSMITCYCKLGDI 123

Query: 360 DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA-ESPKRNHVTWNTMIVG 418
           +       L+     + DV   NA++D Y K  ++  + ELF      RN VTWNTMI  
Sbjct: 124 NSAR----LMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISA 179

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           YVQ GE G A+ MF +M  E V  TEVT  S+L ACA L AL+ G  +H         +D
Sbjct: 180 YVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKID 239

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
           VV+ NALIDMY KCG++  A  VF  ++  N   WN++I G  M+G   E +  F +M++
Sbjct: 240 VVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEK 299

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLD 598
            G +P+ +TFVG+LS CS+ GLL  G+ YF  M+  YG+EP +EHY  MV LLGRAG+L 
Sbjct: 300 EGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLK 359

Query: 599 KAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYA 658
           +A +LI  +P +P+ M+  +LL AC IH + ++G    Q +L+ +P D   +V LSN+YA
Sbjct: 360 EALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYA 419

Query: 659 MARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNM 707
               W+           +   K PG S IE   +VH F AGDTSH     I   L+ +  
Sbjct: 420 SLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAK 479

Query: 708 KSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVD 767
           + +  G++P+ + VL D+ E+EKE  +  HSE++A+AF L   PP   IR++KNLR C D
Sbjct: 480 ELKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIRVVKNLRTCSD 539

Query: 768 CHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           CH+A+K+IS   +REII+RD  RFHHF++G CSC D+W
Sbjct: 540 CHSAMKLISNAFKREIIVRDRKRFHHFRNGSCSCNDYW 577



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 88/390 (22%), Positives = 159/390 (40%), Gaps = 52/390 (13%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           S++  L+SC  + + Q     HCQ++K G   D+     LL+ Y K+  L  A ++F  M
Sbjct: 12  SFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAKRVFMGM 71

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
           P R+ ++    I   +      EA  LF  +     E N  ++ + +     +G      
Sbjct: 72  PRRDVVANNAMISALSKHGYVEEARNLFDNM----TERNSCSWNSMITCYCKLGDINSAR 127

Query: 178 CVFAC----------------------------VYKLGHDSNAFVGTALIDAFSVCGCVE 209
            +F C                               +G   N+     +I A+  CG  E
Sbjct: 128 LMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCG--E 185

Query: 210 FARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCAL 269
           F               A++ F QM++   KP   T   +L AC  L  + + +  HG   
Sbjct: 186 FG-------------TAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIR 232

Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVE 329
               ++D+ +  AL+D+Y K G +  A  +F  + +K++  W+ +I          +A+ 
Sbjct: 233 TKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIA 292

Query: 330 LFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV-GLLSDVFVSNALMDVY 388
            F  M +  + P+  TFV +L  C+    L  G +  S ++ V GL   V     ++D+ 
Sbjct: 293 AFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLL 352

Query: 389 AKCGRMENSVELFAESPKRNHVTWNTMIVG 418
            + G ++ ++EL    P +     N+M++G
Sbjct: 353 GRAGYLKEALELIRAMPMKP----NSMVLG 378



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 137/284 (48%), Gaps = 13/284 (4%)

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           V P++ +F  +L++CA      LG   H  ++++G   D+ +   L+D YAK G ++ + 
Sbjct: 6   VLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAK 65

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            +F   P+R+ V  N MI    + G V +A  +F  M E        +++S++     L 
Sbjct: 66  RVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTER----NSCSWNSMITCYCKLG 121

Query: 459 ALEPG-MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND-WNEVSWNAM 516
            +    +   C  VK     DVV  NA+ID Y K   +  A+ +F +M    N V+WN M
Sbjct: 122 DINSARLMFDCNPVK-----DVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTM 176

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           IS Y   G     + +F  MQ    +P  +T V +LSAC++ G L+ GE +    +    
Sbjct: 177 ISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGE-WIHGYIRTKR 235

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
           ++  +    +++ +  + G L+ A  +  G+  + ++  W +++
Sbjct: 236 LKIDVVLGNALIDMYCKCGALEAAIDVFHGLS-RKNIFCWNSII 278



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 57/105 (54%)

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGS 494
           ML   V  ++ ++S +LR+CA     + G   HC  +K  ++ D+++   L+D YAK G 
Sbjct: 1   MLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGD 60

Query: 495 ITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
           +  A+ VF  M   + V+ NAMIS  S HG   E   +FD M +R
Sbjct: 61  LKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTER 105


>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like, partial [Brachypodium distachyon]
          Length = 745

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 230/594 (38%), Positives = 336/594 (56%), Gaps = 12/594 (2%)

Query: 224 EEALNFFSQM-RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
           E+AL+ F +M       P+  T A  +K+C  +  + V +     A K  + +D +V  +
Sbjct: 152 EDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNS 211

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+ +Y   G++  A  +F  +  K VI W+ MIA Y +     + VE+F  M +     +
Sbjct: 212 LIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFD 271

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           + T +SV  AC  +   +LG  I       G+L    ++ AL+D+YAKCG ++ +  LF 
Sbjct: 272 EVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFD 331

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
               R+ V W+ MI GY Q     +A+ +F++M   +V   +VT  SVL ACA L ALE 
Sbjct: 332 RMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALET 391

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G  VH    + +  + V++  AL+D YAKCG I DA   F+ M   N  +W A+I G + 
Sbjct: 392 GKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMAS 451

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
           +G S E L++F  M +    P ++TF+GVL ACS+G L+E+G  +F SM  +YGI P IE
Sbjct: 452 NGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIE 511

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDF 642
           HY  MV LLGRAG +D+A + I  +P +P+ ++WRALL AC +H NVEIG  + + I+  
Sbjct: 512 HYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSACTVHKNVEIGEEALKQIVPL 571

Query: 643 EPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTS 691
           +P     ++LLSN YA    W           EK   K PG S IE +G +  F A D+ 
Sbjct: 572 DPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVEKIPGCSLIELEGTIFEFFAEDSE 631

Query: 692 HADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMP 751
           H  +  I   +  +    +  GYIP+ +    DV E EK+  +  HSEKLA+AF L K  
Sbjct: 632 HPQLTEIYEKVHEMIENIKMVGYIPNTADARLDVDEYEKQVSVSHHSEKLAIAFGLMKSR 691

Query: 752 PSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           P + IR+ KNLR+C+DCH+A K+ISK+  REII+RD +RFHHF+DG CSC D+W
Sbjct: 692 PGATIRLSKNLRVCIDCHSATKLISKVYNREIIVRDRNRFHHFKDGLCSCNDYW 745



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/380 (23%), Positives = 167/380 (43%), Gaps = 18/380 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           + H+ A +++SC +  DL     +     K+G  +D F  N L+++Y     +  A  LF
Sbjct: 170 DQHTVANTVKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLF 229

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             +  +  I++   I GY  +  + E V +F  +       +     +       +G A 
Sbjct: 230 HTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDAN 289

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN-------------- 220
           L   +     + G   +  + TAL+D ++ CG ++ AR++FD + +              
Sbjct: 290 LGQWIAEYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYT 349

Query: 221 --DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
             D   EAL  F++M+     PN+ T   VL AC  L  +   K  H    +    + + 
Sbjct: 350 QSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVI 409

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           +  AL+D Y K G I +A + FE MP ++   W+ +I   A    S +A+ELF  M +A 
Sbjct: 410 LGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEAN 469

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQ-IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
           + P   TF+ VL AC+    ++ G +   S+    G+   +     ++D+  + G ++ +
Sbjct: 470 IEPTDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEA 529

Query: 398 VELFAESP-KRNHVTWNTMI 416
            +     P + N V W  ++
Sbjct: 530 YQFIRNMPIEPNAVVWRALL 549



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 118/233 (50%), Gaps = 13/233 (5%)

Query: 397 SVELF--AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ-VPATEVTYSSVLRA 453
           ++ LF     P R+  ++N +I  +++ G    A+ +F +ML++  V   + T ++ +++
Sbjct: 121 AIRLFRLGPHPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKS 180

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
           C+ +  L  G  V     K  + +D  V N+LI MYA CG +  A ++F  +     ++W
Sbjct: 181 CSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAW 240

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA 573
           NAMI+GY  +G   EV+++F  M +     + +T + V +AC   G L  G+A     +A
Sbjct: 241 NAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATAC---GRL--GDANLGQWIA 295

Query: 574 NYGIEPCIEHY----TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
            Y  E  +       T++V +  + G LDKA +L + +     V+ W A++  
Sbjct: 296 EYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRM-HSRDVVAWSAMISG 347


>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130 [Vitis vinifera]
 gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 230/660 (34%), Positives = 358/660 (54%), Gaps = 33/660 (5%)

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF--------------- 223
           V A    +G   +  +   LID +  C  V+ A  VFD +                    
Sbjct: 26  VHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYLQEGN 85

Query: 224 -EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
            + +L    +M   G KPN FTF+  LKAC  L  +      HG  +K+ +E    V  A
Sbjct: 86  AKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSVVGNA 145

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
            +D+Y+K G I  A ++F +MP ++++ W+ MIA +        ++ LF RM+     P+
Sbjct: 146 TIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPD 205

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDV--FVSNALMDVYAKCGRMENSVEL 400
           +FTF S L+AC  +  +  G QIH+ ++  G    +   +++A++D+YAKCG +  + ++
Sbjct: 206 EFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKV 265

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F    ++N ++W+ +I G+ Q G + +AM +F ++ E          S ++   A LA +
Sbjct: 266 FDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALV 325

Query: 461 EPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY 520
           E G Q+HC  +K    +D+ VAN++IDMY KCG   +A  +F  M   N VSW  MI+GY
Sbjct: 326 EQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGY 385

Query: 521 SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPC 580
             HGL  + + +F+ MQ  G   + + ++ +LSACS+ GL+ + + YF  +  N+ ++P 
Sbjct: 386 GKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPN 445

Query: 581 IEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHIL 640
           IEHY  MV +LGRAG L +A  LIE +  +P+  IW+ LL AC +H N+EIGR   + + 
Sbjct: 446 IEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIGREVGEILF 505

Query: 641 DFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGD 689
             + ++   +V++SNIYA A  W+           K   KE G SW+E    +H+F  GD
Sbjct: 506 RMDTDNPVNYVMMSNIYAEAGYWKECERVRKLVKAKGLKKEAGQSWVEINKEIHFFYGGD 565

Query: 690 TSHADMNIIRGMLEWLNMKSR-KAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALF 748
            +H     I  ML+ +  + + + GY   L   L DV E+ KE  L VHSEKLA+  AL 
Sbjct: 566 DTHPLTEKIHEMLKEMERRVKEEVGYAYGLRFALHDVEEESKEENLRVHSEKLAIGLALV 625

Query: 749 ---KMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
                     IR+ KNLR+C DCH  IK +SKI+++  ++RD +RFH F+DG CSCGD+W
Sbjct: 626 CDGMEKKGGVIRVFKNLRVCGDCHEFIKGLSKILKKVFVVRDANRFHRFEDGLCSCGDYW 685



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 135/486 (27%), Positives = 243/486 (50%), Gaps = 22/486 (4%)

Query: 60  ATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPE 119
           A  L++C +N      + +H   +  G   DL   N L+++Y K +R+  A  +FD M E
Sbjct: 8   AKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLE 67

Query: 120 RNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCV 179
           RN +S+   + GY        ++ L   +   G + N F F+  LK   ++G  E    +
Sbjct: 68  RNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQI 127

Query: 180 FACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-FNDCF--------------- 223
                K G +  + VG A ID +S CG +  A +VF+ + F +                 
Sbjct: 128 HGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNG 187

Query: 224 EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL--YVAV 281
            ++L  F +M+  G  P+ FTF   LKAC  L  IR     H   +   + + +   +A 
Sbjct: 188 RKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIAS 247

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           A++DLY K G +  A+++F+ + +K++I WS +I  +AQ    ++A++LF ++R++    
Sbjct: 248 AIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNV 307

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           + F    ++   A +  ++ G Q+H  +++V    D+ V+N+++D+Y KCG  E +  LF
Sbjct: 308 DGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLF 367

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
           +E   RN V+W  MI GY + G   KA+ +F++M  + +   EV Y ++L AC S + L 
Sbjct: 368 SEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSAC-SHSGLI 426

Query: 462 PGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDAR-LVFDMMNDWNEVSWNAMIS 518
              Q +   +  N+ M   + +   ++D+  + G + +A+ L+ +M    NE  W  ++S
Sbjct: 427 RESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLS 486

Query: 519 GYSMHG 524
              +HG
Sbjct: 487 ACRVHG 492



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 94/277 (33%), Positives = 153/277 (55%), Gaps = 4/277 (1%)

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
              +L+ C+     D G Q+H+  V +G   D+ ++N L+D+Y KC R++ +  +F    
Sbjct: 7   LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRML 66

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
           +RN V+W  ++ GY+Q G    ++ +  +M    V   E T+S+ L+AC +L  +E GMQ
Sbjct: 67  ERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQ 126

Query: 466 VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGL 525
           +H + VK+ ++   VV NA IDMY+KCG I  A  VF+ M   N VSWNAMI+G++  G 
Sbjct: 127 IHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGN 186

Query: 526 SAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY- 584
             + L +F  MQ +G  P+  TF   L AC   G +  G     S++   G    I +  
Sbjct: 187 GRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITR-GFPISIRNII 245

Query: 585 -TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
            +++V L  + G+L +A K+ + I  Q +++ W AL+
Sbjct: 246 ASAIVDLYAKCGYLFEAQKVFDRIE-QKNLISWSALI 281



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 109/466 (23%), Positives = 207/466 (44%), Gaps = 52/466 (11%)

Query: 46  PITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLN 105
            + +S  + N  +++TSL++C     ++  M IH   +K G        N  +++Y K  
Sbjct: 95  EMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCG 154

Query: 106 RLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLK 165
           R+  A ++F++MP RN +S+   I G+T      +++ LF  +  +G   + F FT+ LK
Sbjct: 155 RIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLK 214

Query: 166 VLVSMGWAELCPCVFACVYKLGH--DSNAFVGTALIDAFSVCGCVEFARKVFDGLFND-- 221
              ++G       + A +   G        + +A++D ++ CG +  A+KVFD +     
Sbjct: 215 ACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNL 274

Query: 222 --------------CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGC 267
                            EA++ F Q+R      + F  + ++     L  +   K  H  
Sbjct: 275 ISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCY 334

Query: 268 ALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDA 327
            LK    +D+ VA +++D+Y K G    A R+F EM  ++V+ W+ MI  Y +  L   A
Sbjct: 335 ILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKA 394

Query: 328 VELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDV 387
           + LF RM+   +  ++  ++++L AC+           HS ++R    S  + S      
Sbjct: 395 IHLFNRMQLDGIELDEVAYLALLSACS-----------HSGLIRE---SQEYFS------ 434

Query: 388 YAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTY 447
                R+ N+ ++    P   H      I+G  + G++ +A  +   M   ++   E  +
Sbjct: 435 -----RLCNNHQM---KPNIEHYACMVDILG--RAGQLKEAKNLIENM---KLKPNEGIW 481

Query: 448 SSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCG 493
            ++L AC     LE G +V  +  + + D  V     + ++YA+ G
Sbjct: 482 QTLLSACRVHGNLEIGREVGEILFRMDTDNPVNYV-MMSNIYAEAG 526



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 5/188 (2%)

Query: 448 SSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND 507
           + +LR C+     + G+QVH   V   +  D+++ N LIDMY KC  +  A  VFD M +
Sbjct: 8   AKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLE 67

Query: 508 WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAY 567
            N VSW A++ GY   G +   L +   M   G +PN  TF   L AC   G++E G   
Sbjct: 68  RNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENG-MQ 126

Query: 568 FKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
              M    G E       + + +  + G +  A ++   +PF+ +++ W A++     H 
Sbjct: 127 IHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFR-NLVSWNAMIAG---HT 182

Query: 628 NVEIGRLS 635
           +   GR S
Sbjct: 183 HEGNGRKS 190


>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
 gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
          Length = 645

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 224/561 (39%), Positives = 328/561 (58%), Gaps = 46/561 (8%)

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y   G +  +  +F    + +V  +S +I  + Q+ L   A   + +M    V PN FTF
Sbjct: 89  YAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTF 148

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
            SVL++C+    L+ G  +H   +++GL SD++V   L+DVYA+ G +  + +LF + P+
Sbjct: 149 SSVLKSCS----LESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPE 204

Query: 407 RNHVT-------------------------------WNTMIVGYVQLGEVGKAMIMFSKM 435
           R+ V+                               WN MI GY Q G   +++ +F +M
Sbjct: 205 RSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRM 264

Query: 436 LEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSI 495
           L  +    EVT  +VL AC  L ALE G  +H         ++V V  ALIDMY+KCGS+
Sbjct: 265 LVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSL 324

Query: 496 TDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSAC 555
            DARLVFD + D + V+WN+MI GY+MHG S   L++F+ M + G +P ++TF+G+LSAC
Sbjct: 325 EDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSAC 384

Query: 556 SNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMI 615
            +GGL+E+G ++F+ M   YGIEP IEHY  MV+LLGRAGHL++A  L++ +      ++
Sbjct: 385 GHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVL 444

Query: 616 WRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS------- 668
           W  LLG C +H N+++G   A+ ++D +  +  T+VLLSN+YA   +WE  A        
Sbjct: 445 WGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKE 504

Query: 669 ----KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRD 724
               KE G S IE    VH F AG+  H     I  ML  +N   +  GY P    VL D
Sbjct: 505 HGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYVMLNEINSWLKARGYTPQTDVVLHD 564

Query: 725 VREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREII 784
           +RE++KE+ L VHSEKLA+AF L    P + ++I+KNLR+C DCHT +K+IS+I  R+I+
Sbjct: 565 LREEQKEQSLEVHSEKLAIAFGLISTKPGTTVKIVKNLRVCSDCHTVMKMISEITGRKIV 624

Query: 785 IRDVHRFHHFQDGCCSCGDFW 805
           +RD +RFHHF+DG CSCGD+W
Sbjct: 625 MRDRNRFHHFEDGLCSCGDYW 645



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 205/405 (50%), Gaps = 49/405 (12%)

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
           F+ A  ++SQM + G +PN FTF+ VLK+C    ++   K  H  A+K     DLYV   
Sbjct: 126 FDRAFGYYSQMLSCGVEPNAFTFSSVLKSC----SLESGKVLHCQAIKLGLGSDLYVRTG 181

Query: 283 LLDLYTKSGEISNARRIFEEMPKK-------------------------------DVIPW 311
           L+D+Y + G++  AR++F++MP++                               DV+ W
Sbjct: 182 LVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCW 241

Query: 312 SFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR 371
           + MI  YAQ+ +  ++++LF RM  A   PN+ T ++VL AC  +  L+ G  IHS +  
Sbjct: 242 NVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIEN 301

Query: 372 VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIM 431
            G+  +V V  AL+D+Y+KCG +E++  +F     ++ V WN+MIVGY   G    A+ +
Sbjct: 302 KGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQL 361

Query: 432 FSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMY 489
           F +M E     T++T+  +L AC     +E G     L ++  Y ++  + +   ++++ 
Sbjct: 362 FEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRL-MRDKYGIEPKIEHYGCMVNLL 420

Query: 490 AKCGSITDAR-LVFDMMNDWNEVSWNAMISGYSMH---GLSAEVLKVFDLMQQRGWRPNN 545
            + G + +A  LV +M    + V W  ++    +H    L  E+ K   L+ Q+    N+
Sbjct: 421 GRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKF--LVDQK--LANS 476

Query: 546 LTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSL 590
            T+V + +  +  G  E G A  ++++  +GIE   EH  S + +
Sbjct: 477 GTYVLLSNMYAATGNWE-GVAKMRTLMKEHGIEK--EHGCSSIEV 518



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 92/319 (28%), Positives = 147/319 (46%), Gaps = 45/319 (14%)

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
           QIH+ ++R GL  +  ++  L   YA  GR++ SV +F    + N  +++ +I  +VQ  
Sbjct: 65  QIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSR 124

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN 483
              +A   +S+ML   V     T+SSVL++C    +LE G  +HC  +K     D+ V  
Sbjct: 125 LFDRAFGYYSQMLSCGVEPNAFTFSSVLKSC----SLESGKVLHCQAIKLGLGSDLYVRT 180

Query: 484 ALIDMYAKCGSITDARLVFDMMNDWNEVS------------------------------- 512
            L+D+YA+ G +  AR +FD M + + VS                               
Sbjct: 181 GLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVC 240

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
           WN MI GY+  G+  E LK+F  M      PN +T + VLSAC   G LE G  +  S +
Sbjct: 241 WNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGR-WIHSYI 299

Query: 573 ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIG 632
            N GI+  +   T+++ +  + G L+ A  + + I     V+ W +++    +H      
Sbjct: 300 ENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIR-DKDVVAWNSMIVGYAMHG----- 353

Query: 633 RLSAQHILD-FEPEDEATH 650
              +QH L  FE   E  H
Sbjct: 354 --FSQHALQLFEEMTETGH 370



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 106/421 (25%), Positives = 173/421 (41%), Gaps = 54/421 (12%)

Query: 76  MTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVS 135
           + IH  +L++G   +      L   Y  L RL  +  +F+   E N  SF   I  +  S
Sbjct: 64  LQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQS 123

Query: 136 SQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVG 195
             F  A G +S +   G E N F F++ LK   S+   ++  C      KLG  S+ +V 
Sbjct: 124 RLFDRAFGYYSQMLSCGVEPNAFTFSSVLKS-CSLESGKVLHCQ---AIKLGLGSDLYVR 179

Query: 196 TALIDAFSVCGCVEFARKVFD---------------------------GLFNDCFE---- 224
           T L+D ++  G V  AR++FD                            LF    E    
Sbjct: 180 TGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVV 239

Query: 225 ----------------EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCA 268
                           E+L  F +M      PN  T   VL AC  L  +   +  H   
Sbjct: 240 CWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYI 299

Query: 269 LKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAV 328
                +++++V  AL+D+Y+K G + +AR +F+ +  KDV+ W+ MI  YA    S  A+
Sbjct: 300 ENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHAL 359

Query: 329 ELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV-RVGLLSDVFVSNALMDV 387
           +LF  M +    P   TF+ +L AC     ++ G     L+  + G+   +     ++++
Sbjct: 360 QLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNL 419

Query: 388 YAKCGRMENSVELFAE-SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVT 446
             + G +E +  L    +   + V W T++ G  +L    K     +K L +Q  A   T
Sbjct: 420 LGRAGHLEEAYGLVKNMTIAADPVLWGTLL-GCCRLHVNIKLGEEIAKFLVDQKLANSGT 478

Query: 447 Y 447
           Y
Sbjct: 479 Y 479



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 105/247 (42%), Gaps = 51/247 (20%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N+ ++++ L+SC     L++   +HCQ +K G   DL+    L++VY +   +  A +
Sbjct: 142 EPNAFTFSSVLKSC----SLESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQ 197

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLF--------------------STLHREG 152
           LFD+MPER+ +S  T +  Y+   +  +A  LF                    S +  E 
Sbjct: 198 LFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNES 257

Query: 153 HEL-----------NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDA 201
            +L           N     A L     +G  E    + + +   G   N  VGTALID 
Sbjct: 258 LKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDM 317

Query: 202 FSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTF 245
           +S CG +E AR VFD +                 +   + AL  F +M   G KP + TF
Sbjct: 318 YSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITF 377

Query: 246 AFVLKAC 252
             +L AC
Sbjct: 378 IGILSAC 384



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 51/112 (45%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L +C Q   L++   IH  +  KG  +++     L+++Y K   L DA  +FD + +++ 
Sbjct: 280 LSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDV 339

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           +++ + I GY +      A+ LF  +   GH+     F   L      G  E
Sbjct: 340 VAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVE 391



 Score = 43.9 bits (102), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 44/202 (21%), Positives = 82/202 (40%), Gaps = 30/202 (14%)

Query: 447 YSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN 506
           ++S++    S+A L   +Q+H   ++     + ++   L   YA  G +  +  VF+  +
Sbjct: 50  FASLIDKSKSVAHL---LQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFD 106

Query: 507 DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS---------- 556
           + N  S++A+I  +    L       +  M   G  PN  TF  VL +CS          
Sbjct: 107 EPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLESGKVLHCQ 166

Query: 557 ------------NGGLLE----QGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKA 600
                         GL++     G+      + +   E  +   T+M++   + G LDKA
Sbjct: 167 AIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKA 226

Query: 601 AKLIEGIPFQPSVMIWRALLGA 622
             L EG+  +  V+ W  ++G 
Sbjct: 227 RSLFEGMK-ERDVVCWNVMIGG 247


>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Brachypodium distachyon]
          Length = 661

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 239/659 (36%), Positives = 344/659 (52%), Gaps = 84/659 (12%)

Query: 228 NFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLY 287
           + +  +R V F P+       LK+C       +A++ H  A+ +    D +VA +LL  Y
Sbjct: 6   SLYHFLRHVSFPPDPHLLPSALKSC---PAQPLARALHAAAVVSGLAEDPFVASSLLHSY 62

Query: 288 TKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFV 347
            + G    AR +F+ MP+K+V+ WS +IA Y+    +  A  L  +MR A V PN  T+ 
Sbjct: 63  IRLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWN 122

Query: 348 SV-----------------------------------LQACATMEGLDLGNQIHSLVVRV 372
            +                                   L A   ++ + +G Q+H  VV+ 
Sbjct: 123 GLVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKA 182

Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMF 432
           G   D  V  AL+D+Y KCGR +  V +F ES   +  + N ++ G  +  +V +A+++F
Sbjct: 183 GCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLF 242

Query: 433 SKMLEEQVPATEVTYSSVLRAC-----------------------------------ASL 457
            + +   V    V+++S++  C                                   A++
Sbjct: 243 REFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANV 302

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
           AAL  G   HC +++  +  DV V +AL+DMYAKCG    AR +FD M   N VSWNAMI
Sbjct: 303 AALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMI 362

Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
            GY+MHG +A  +++F  MQ+   +P+ +TF  VL ACS  GL E+G  YF  M   +GI
Sbjct: 363 GGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGI 422

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQ 637
            P +EHY  MV+LLGR+G LD+A  LI  +PF+P   IW +LLG+C ++ NV +  ++A+
Sbjct: 423 SPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGNVLLAEVAAE 482

Query: 638 HILDFEPEDEATHVLLSNIYAMARSWEK-----------AASKEPGLSWIENQGMVHYFR 686
            +   EP +   +VLLSNIYA  + W+               KE G SWIE +  VH   
Sbjct: 483 KLFQLEPGNAGNYVLLSNIYASKKMWDGVNRVRDEMKNMGLKKEKGCSWIEIKNKVHMLL 542

Query: 687 AGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFA 746
           AGD SH  M  I   L  L ++  + G+ P    VL DV E EK+  L VHSEKLA+A  
Sbjct: 543 AGDNSHPMMTAITEKLNQLTIEMNRLGFAPSRDFVLHDVEEQEKDNILAVHSEKLAVALG 602

Query: 747 LFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           L    P +P+R+IKNLRIC DCH A+K IS   QREI +RD +RFHHF+DG CSCGD+W
Sbjct: 603 LISTRPGTPLRVIKNLRICGDCHEAMKFISSFEQREISVRDTNRFHHFKDGKCSCGDYW 661



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 129/528 (24%), Positives = 207/528 (39%), Gaps = 106/528 (20%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           + H   ++L+SC        A  +H   +  G   D F  + LL+ Y++L     A  +F
Sbjct: 19  DPHLLPSALKSCPAQ---PLARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSVF 75

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D MPE+N + +   I GY+       A GL   +   G E N   +   +  L   G A 
Sbjct: 76  DRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRA- 134

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMR 234
                                   +DA +                            +M 
Sbjct: 135 ------------------------LDAVTA-------------------------LVRMH 145

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
           + GF P+    +  L A   +  + V K  HG  +K    +D  V  AL+D+Y K G   
Sbjct: 146 SEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGRAD 205

Query: 295 NARRIFEEMPKKDV-----------------------------------IPWSFMIARYA 319
              R+F E    DV                                   + W+ ++A   
Sbjct: 206 EIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVACCV 265

Query: 320 QTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVF 379
           Q    ++AV+LF  M+   V PN  T   VL A A +  L  G   H   +R G L DV+
Sbjct: 266 QNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVY 325

Query: 380 VSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ 439
           V +AL+D+YAKCG+  ++  +F   P RN V+WN MI GY   G+   A+ +F  M + +
Sbjct: 326 VGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCK 385

Query: 440 VPATEVTYSSVLRACASLAALEPG-------MQVHCLTVKANYDMDVVVANALIDMYAKC 492
                VT++ VL AC+     E G        Q H ++ +  +         ++ +  + 
Sbjct: 386 QKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEH------YACMVTLLGRS 439

Query: 493 GSITDA-RLVFDMMNDWNEVSWNAMISGYSMHG--LSAEVL--KVFDL 535
           G + +A  L+ +M  + +   W +++    ++G  L AEV   K+F L
Sbjct: 440 GKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGNVLLAEVAAEKLFQL 487


>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
 gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 234/628 (37%), Positives = 346/628 (55%), Gaps = 47/628 (7%)

Query: 225 EALNFFSQMRAVG-FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
           EA+ +++  R     +P+      V KAC  L  +  AK  H  A++  +  D+ +  AL
Sbjct: 60  EAIQYYNDFRHKNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNAL 119

Query: 284 LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
           +D+Y K      AR +FE MP +DVI W+ M + Y    L  +A+  F +M      PN 
Sbjct: 120 IDMYGKCRCSEGARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNS 179

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
            T  S+L AC  ++ L  G ++H  VVR G+  +VFVS+AL+++YA C  +  +  +F  
Sbjct: 180 VTVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDS 239

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQV----------------------- 440
             +R+ V+WN +I  Y    E  K + +F +M+ E V                       
Sbjct: 240 MSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKA 299

Query: 441 ------------PATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDM 488
                          ++T +SVL AC +L +L  G Q+H    +  +  D+    AL+ M
Sbjct: 300 LEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFM 359

Query: 489 YAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTF 548
           YAKCG +  +R VF MM   + VSWN MI   SMHG   E L +F  M   G RPN++TF
Sbjct: 360 YAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTF 419

Query: 549 VGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIP 608
            GVLS CS+  L+++G   F SM  ++ +EP  +H++ MV +L RAG L++A + I+ +P
Sbjct: 420 TGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMP 479

Query: 609 FQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA- 667
            +P+   W ALLG C ++ NVE+GR++A  + + E ++   +VLLSNI   A+ W +A+ 
Sbjct: 480 IEPTAGAWGALLGGCRVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASE 539

Query: 668 ----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPD 717
                     +K PG SWI+ +  VH F  GD S+   + I   L+++  K R AGY+P+
Sbjct: 540 TRKLMRDRGVTKNPGCSWIQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKMRIAGYLPN 599

Query: 718 LSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISK 777
              VL+DV ++EKE  L  HSEKLA+AF +  +   S IR+ KNLRIC DCH AIK ++K
Sbjct: 600 TDFVLQDVDQEEKEEVLCNHSEKLAVAFGVLNLNGESSIRVFKNLRICGDCHNAIKFMAK 659

Query: 778 IVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           IV  +II+RD  RFHHF+DG CSC DFW
Sbjct: 660 IVGVKIIVRDSLRFHHFRDGLCSCQDFW 687



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 202/400 (50%), Gaps = 38/400 (9%)

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR-Q 336
           ++A+  + +Y+ SG++  AR +F+++P+ D+  W+ +I+   +   S++A++ +   R +
Sbjct: 12  HLALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHK 71

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             V P++   +SV +ACA++  +    ++H   +R G  SDV + NAL+D+Y KC   E 
Sbjct: 72  NCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEG 131

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           +  +F   P R+ ++W +M   YV  G + +A+  F KM         VT SS+L AC  
Sbjct: 132 ARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTD 191

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           L  L+ G +VH   V+     +V V++AL++MYA C SI  A+LVFD M+  + VSWN +
Sbjct: 192 LKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVL 251

Query: 517 ISGYSM-----------------------------------HGLSAEVLKVFDLMQQRGW 541
           I+ Y +                                   +G + + L+V   MQ  G+
Sbjct: 252 ITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGF 311

Query: 542 RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAA 601
           +PN +T   VL AC+N   L  G+     +  ++  +  +   T++V +  + G L+ + 
Sbjct: 312 KPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQD-LTTTTALVFMYAKCGDLELSR 370

Query: 602 KLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
           ++   +  + +V  W  ++ A  +H N E   L  + ++D
Sbjct: 371 RVFSMMTKRDTVS-WNTMIIATSMHGNGEEALLLFREMVD 409



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 121/477 (25%), Positives = 217/477 (45%), Gaps = 54/477 (11%)

Query: 97  LLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTL-HREGHEL 155
            + VY     L  A  LFD++P+ +  ++   I   T   + +EA+  ++   H+   E 
Sbjct: 17  FIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEP 76

Query: 156 NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF 215
           +     +  K   S+        V     + G  S+  +G ALID +  C C E AR VF
Sbjct: 77  DKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVF 136

Query: 216 DGL-FND---------CF------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIR 259
           +G+ F D         C+       EAL  F +M   G +PN+ T + +L AC  L  ++
Sbjct: 137 EGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLK 196

Query: 260 VAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARY- 318
             +  HG  ++     +++V+ AL+++Y     I  A+ +F+ M ++D + W+ +I  Y 
Sbjct: 197 SGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYF 256

Query: 319 ----------------------------------AQTDLSIDAVELFCRMRQAFVAPNQF 344
                                              Q   +  A+E+  RM+ +   PNQ 
Sbjct: 257 LNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQI 316

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           T  SVL AC  +E L  G QIH  + R     D+  + AL+ +YAKCG +E S  +F+  
Sbjct: 317 TITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMM 376

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
            KR+ V+WNTMI+     G   +A+++F +M++  V    VT++ VL  C+    ++ G+
Sbjct: 377 TKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGL 436

Query: 465 QV-HCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISG 519
            +   ++   + + D    + ++D+ ++ G + +A   +  M  +    +W A++ G
Sbjct: 437 LIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGG 493



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 112/446 (25%), Positives = 184/446 (41%), Gaps = 61/446 (13%)

Query: 64  QSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTI 123
           ++C    D+  A  +H   ++ G C D+   N L+++Y K      A  +F+ MP R+ I
Sbjct: 86  KACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMPFRDVI 145

Query: 124 SFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACV 183
           S+ +    Y       EA+G F  +   G   N    ++ L     +   +    V   V
Sbjct: 146 SWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGFV 205

Query: 184 YKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------------------------ 219
            + G   N FV +AL++ ++ C  +  A+ VFD +                         
Sbjct: 206 VRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGL 265

Query: 220 ---------------------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKAC 252
                                      N   E+AL   S+M+  GFKPN  T   VL AC
Sbjct: 266 SVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPAC 325

Query: 253 LGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWS 312
             L+++R  K  HG   +  +  DL    AL+ +Y K G++  +RR+F  M K+D + W+
Sbjct: 326 TNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWN 385

Query: 313 FMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV 372
            MI   +      +A+ LF  M  + V PN  TF  VL  C+    +D G  I   + R 
Sbjct: 386 TMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRD 445

Query: 373 -GLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMIVG-----YVQLGEV 425
             +  D    + ++DV ++ GR+E + E   + P +     W  ++ G      V+LG +
Sbjct: 446 HSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRVYKNVELGRI 505

Query: 426 GKAMIMFSKMLEEQVPATEVTYSSVL 451
             A  +F   +E   P   V  S++L
Sbjct: 506 A-ANRLFE--IESDNPGNYVLLSNIL 528



 Score = 42.7 bits (99), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 49/110 (44%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +  + L +C   + L+    IH  + +     DL  T  L+ +Y K   L  + ++F
Sbjct: 314 NQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVF 373

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFL 164
             M +R+T+S+ T I   ++     EA+ LF  +   G   N   FT  L
Sbjct: 374 SMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVL 423


>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
          Length = 850

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 244/682 (35%), Positives = 360/682 (52%), Gaps = 64/682 (9%)

Query: 188 HDSNAFVGTALIDAFSVCGCVEFARKVFDGL-----------------FNDCFEEALNFF 230
           HD  A        AFS    +++ARKVFD +                  +D  +  L F 
Sbjct: 169 HDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFI 228

Query: 231 SQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKS 290
             +    F PN FTF  ++KA        V K+ HG A+KT +  D++V  +L+  Y   
Sbjct: 229 RMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASC 288

Query: 291 GEISNARRIFE--EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVS 348
           G +  A  +FE  E   KD++ W+ M+  + Q      A++LF RMR   V PN  T VS
Sbjct: 289 GHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVS 348

Query: 349 VLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRN 408
           V+ ACA    L LG ++   + R  ++ ++ V NA +D++ KCG +E +  LF    KR+
Sbjct: 349 VMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRD 408

Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPA-------------------------- 442
            V+W T+I GY ++ E G A  +F  M  + +PA                          
Sbjct: 409 VVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQL 468

Query: 443 -------TEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSI 495
                   +VT  S L ACA L A++ G  +H    K    ++  +A +LIDMY+K G +
Sbjct: 469 TKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDV 528

Query: 496 TDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSAC 555
             A  VF  + + +   W+AMI+G +MHG     +++F  MQ+   +PN++TF  +L AC
Sbjct: 529 EKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCAC 588

Query: 556 SNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMI 615
           S+ GL+++G+  F  M   YG+ P  +HY+ MV +LGRAGHL++A K IEG+P  PS  +
Sbjct: 589 SHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASV 648

Query: 616 WRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-------- 667
           W ALLGAC IH N+E+   +   +L+ EP +   +VLLSN+YA    WE  +        
Sbjct: 649 WGALLGACCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNLYAKTGDWEGVSELRQQMRD 708

Query: 668 ---SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRD 724
               KE G S IE  G VH F  GD +H     I   L+ +  + R  GY+ +   +L+ 
Sbjct: 709 SGLKKETGCSSIEIDGTVHEFIVGDNAHPLSRDIYAKLDEIMARLRSHGYVANTLCMLQF 768

Query: 725 VREDE-KERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREI 783
           V E+E KE+ L +HSEK+A+AF L +      IRI+KNLR+C DCHT  K++SK+  R+I
Sbjct: 769 VEEEEMKEKALKLHSEKMAIAFGLIRADSQQAIRIVKNLRVCRDCHTVAKMVSKVYGRDI 828

Query: 784 IIRDVHRFHHFQDGCCSCGDFW 805
           ++RD +RFHHF  G CSC D+W
Sbjct: 829 VLRDRYRFHHFSGGHCSCQDYW 850



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 126/546 (23%), Positives = 234/546 (42%), Gaps = 74/546 (13%)

Query: 41  NSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNV 100
           +S+ TP + + +     +     Q C     L+    IH Q+L+     D +A + L   
Sbjct: 127 HSSPTPASATATNVGDRAL---FQQCTSFKQLKQ---IHAQMLRTNKLHDPYAASELFTA 180

Query: 101 --YVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLF-STLHREGHELNP 157
             +   + L  A K+FD++P+ N  S+   I+    SS  +++V +F   LH      N 
Sbjct: 181 AAFSSFSALDYARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNK 240

Query: 158 FAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD- 216
           F F   +K +       +   V     K     + FV  +LI  ++ CG ++ A  VF+ 
Sbjct: 241 FTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEM 300

Query: 217 ----------------GLFNDCF-EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIR 259
                           G     + ++AL+ F +MR  G  PN  T   V+ AC     + 
Sbjct: 301 IEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLT 360

Query: 260 VAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI-------------------------- 293
           + +       +    M+L V  A +D++ K GE+                          
Sbjct: 361 LGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYA 420

Query: 294 -----SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELF--CRMRQAFVAPNQFTF 346
                  AR IF+ MP+KD+  W+ +I+ Y Q+    +A+ +F   ++ ++   P+Q T 
Sbjct: 421 KMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTL 480

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
           +S L ACA +  +D+G  IH  + +  +  +  ++ +L+D+Y+K G +E ++E+F     
Sbjct: 481 LSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGN 540

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM-- 464
           ++   W+ MI G    G    A+ +F  M E QV    VT++++L AC+    ++ G   
Sbjct: 541 KDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRL 600

Query: 465 -----QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS-WNAMIS 518
                +V+ +  K  +       + ++D+  + G + +A    + M      S W A++ 
Sbjct: 601 FDEMERVYGVVPKTKH------YSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLG 654

Query: 519 GYSMHG 524
              +HG
Sbjct: 655 ACCIHG 660



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 43/192 (22%), Positives = 84/192 (43%), Gaps = 12/192 (6%)

Query: 422 LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVV 481
           +  +G++++  S        AT V   ++ + C S   L+   Q+H   ++ N   D   
Sbjct: 117 INSIGRSIVQHSSPTPASATATNVGDRALFQQCTSFKQLK---QIHAQMLRTNKLHDPYA 173

Query: 482 ANALID--MYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVF-DLMQQ 538
           A+ L     ++   ++  AR VFD +   N  SWN +I   +      + + VF  ++  
Sbjct: 174 ASELFTAAAFSSFSALDYARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHD 233

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGEA-YFKSMVANYGIEPCIEHYTSMVSLLGRAGHL 597
             + PN  TF  ++ A +       G+A +  ++  ++G +  +    S++      GHL
Sbjct: 234 SPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDVFV--LNSLIHFYASCGHL 291

Query: 598 DKAA---KLIEG 606
           D A    ++IEG
Sbjct: 292 DLAYLVFEMIEG 303


>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
          Length = 1321

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 244/713 (34%), Positives = 396/713 (55%), Gaps = 37/713 (5%)

Query: 107 LPDATKLFDEMPERNTISFVTTIQGYTVS--SQFVEAVGLFS---TLHRE---GHELNPF 158
           L +A  LF++ P+R  +S   + +        + V+  G F+   T H E   G     +
Sbjct: 56  LNNACILFEKTPKRIGVSITESHRSGCTDDPEEGVKEAGFFTRNETPHVEFGGGFPHRQY 115

Query: 159 AFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL 218
            F+A L      G  EL       V K+G  S+ FV T+LID ++ CG V+ A +V+D +
Sbjct: 116 VFSA-LSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKM 174

Query: 219 F----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAK 262
                            N  F +A   F Q+  +G +PN++T++ +L  C  +  I+  K
Sbjct: 175 TSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGK 234

Query: 263 SAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTD 322
             H   +K  Y  +  V  ALL LY+K G +  A  +FE + ++++I W+  I  + Q  
Sbjct: 235 QLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHG 294

Query: 323 LSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSN 382
               A++ F  MR++ + PN+FTF  VL +C  ++    G   H+ V++ G+ S VFV  
Sbjct: 295 DFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGT 354

Query: 383 ALMDVYAKCGRMENSVELFAESPKR-NHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVP 441
           A++D+Y+  G M+ + + F +  +  ++V+WN +I GYV   ++ KAM  F +M++E V 
Sbjct: 355 AIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVA 414

Query: 442 ATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLV 501
             E TYS++ +AC+S  +L   +Q+H   +K+N + ++ VA++LI+ Y +CGS+ +A  V
Sbjct: 415 CNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQV 474

Query: 502 FDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLL 561
           F  ++D + VSWN++I  YS +G   + + +   M + G +P + TF+ VLSACS+ GL+
Sbjct: 475 FTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLV 534

Query: 562 EQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLG 621
           ++G+ +FKSMV +Y I+P   H + MV +LGRAG L+ A   I+ +  +P+  IWR LL 
Sbjct: 535 QEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLA 594

Query: 622 ACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKE 670
           AC  ++N+++    A+ ILD EP D   +V LSN+YA    W           +K  SKE
Sbjct: 595 ACRYNSNLQMAEYVAEKILDLEPNDATVYVTLSNMYAEVGRWADAENQRRLMEQKEISKE 654

Query: 671 PGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEK 730
           PG SWIE    ++ F + D +H +M  +   L+ L  + +  GY P  + VL       K
Sbjct: 655 PGCSWIEVNNKMYKFFSHDKAHPEMPKVYEKLKQLVRQIQDIGYSPPTTTVLHPESRQPK 714

Query: 731 ERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREI 783
           E+ +  HSEKLA+ F L  +PP  PIR++KNLR+C+DC++ +K IS+I  R I
Sbjct: 715 EQLILYHSEKLAVCFGLLSLPPGKPIRVLKNLRVCLDCYSTMKYISRITDRYI 767



 Score =  315 bits (807), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 175/512 (34%), Positives = 280/512 (54%), Gaps = 58/512 (11%)

Query: 193  FVGTALIDAFSVCGCVEFARKVFDGLFND-----------C-----FEEALNFFSQMRAV 236
            +    L+  ++ CG +  ARK+FD + N            C     +EEAL+ FS+M+  
Sbjct: 839  YFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKE 898

Query: 237  GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNA 296
            G +PN F    +LKAC  L   R  ++ H   LK  +E D Y+  AL+ +Y+K G +  A
Sbjct: 899  GLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKA 958

Query: 297  RRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM 356
             R+F+ +  KD++  + M++ YAQ     +A++L  +M+QA V PN  ++ +++   + +
Sbjct: 959  CRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQV 1018

Query: 357  EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMI 416
                + +++  L+   G+  DV                               V+W ++I
Sbjct: 1019 GDKSMVSEVFRLMTANGVEPDV-------------------------------VSWTSVI 1047

Query: 417  VGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD 476
             G+VQ     +    F +ML++    + VT SS+L AC ++A L  G ++H   +    +
Sbjct: 1048 SGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVE 1107

Query: 477  MDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLM 536
             DV V +AL+DMYAKCG I++A+++F MM + N V+WN++I GY+ HG   E +++F+ M
Sbjct: 1108 KDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQM 1167

Query: 537  QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGH 596
            ++   + ++LTF  VL+ACS+ G++E GE+ F  M   Y IEP +EHY  MV LLGRAG 
Sbjct: 1168 EESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIEPRLEHYACMVDLLGRAGK 1227

Query: 597  LDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNI 656
            L +A  LI+ +P +P   +W ALLGAC  H N+E+  ++A+H+ + EPE   + +LLSN+
Sbjct: 1228 LSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFELEPESPGSSLLLSNL 1287

Query: 657  YAMARSWEKAA-----------SKEPGLSWIE 677
            YA A  W  AA            K PG SWIE
Sbjct: 1288 YADAGRWGNAAKMKKMMKQRKFGKFPGCSWIE 1319



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 125/457 (27%), Positives = 233/457 (50%), Gaps = 20/457 (4%)

Query: 61  TSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPER 120
           ++L  C +   ++     HC V+K G   D F    L+++Y K   +  A +++D+M   
Sbjct: 118 SALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSL 177

Query: 121 NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVF 180
           +  +    I  Y  +  FV+A  +F  +   G   N + ++  L V  ++   +    + 
Sbjct: 178 DAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLH 237

Query: 181 ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFE 224
           A V K+ + S   VG AL+  +S CG +E A  VF+ L                 +  F+
Sbjct: 238 AHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFK 297

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           +AL  FS MR  G +PN FTF+ VL +C  +      +  H   +K      ++V  A++
Sbjct: 298 KALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAII 357

Query: 285 DLYTKSGEISNARRIFEEMPK-KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
           D+Y+  GE+  A + F++M +    + W+ +IA Y   +    A+E FCRM +  VA N+
Sbjct: 358 DMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNE 417

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
           FT+ ++ +AC++   L    QIHS +++  + S++ V+++L++ Y +CG +EN+V++F +
Sbjct: 418 FTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQ 477

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
               + V+WN++I  Y Q G+  KA+ +  KM+EE    T  T+ +VL AC+    ++ G
Sbjct: 478 ISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEG 537

Query: 464 MQVHCLTVKANYDM--DVVVANALIDMYAKCGSITDA 498
            +     V+ +Y +  +    + ++D+  + G + +A
Sbjct: 538 QEFFKSMVQ-DYSIQPEETHCSCMVDILGRAGQLENA 573



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 117/493 (23%), Positives = 220/493 (44%), Gaps = 59/493 (11%)

Query: 55   NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
            +S +YA ++    ++  L     +H  ++  G     +    L++ Y +  +L +A KLF
Sbjct: 802  SSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLF 861

Query: 115  DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
            D++P  N   ++           + EA+  FS + +EG   N F   + LK    +    
Sbjct: 862  DKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRR 921

Query: 175  LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF----------- 223
                +   + K   +S+A++ +ALI  +S CG VE A +VFD + +              
Sbjct: 922  TGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYA 981

Query: 224  -----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                  EALB   +M+  G KPN  ++                                 
Sbjct: 982  QHGFVHEALBLVQKMQQAGVKPNVVSWN-------------------------------- 1009

Query: 279  VAVALLDLYTKSGEISNARRIFEEMP----KKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
                L+  +++ G+ S    +F  M     + DV+ W+ +I+ + Q   + +  + F  M
Sbjct: 1010 ---TLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEM 1066

Query: 335  RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
                  P+  T  S+L AC  +  L  G +IH   + +G+  DV+V +AL+D+YAKCG +
Sbjct: 1067 LDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYI 1126

Query: 395  ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
              +  LF   P+RN VTWN++I GY   G   +A+ +F++M E       +T+++VL AC
Sbjct: 1127 SEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNAC 1186

Query: 455  ASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEV 511
            +    +E G  +    ++  Y ++  + +   ++D+  + G +++A  L+  M  + ++ 
Sbjct: 1187 SHAGMVELGESLF-XKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKF 1245

Query: 512  SWNAMISGYSMHG 524
             W A++     HG
Sbjct: 1246 VWGALLGACRNHG 1258



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 142/576 (24%), Positives = 239/576 (41%), Gaps = 94/576 (16%)

Query: 2   IRLFNYKTFSCKQLTHQSKINAWLR-GLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYA 60
           +R+++ K  S    T    I+A+ R G   QA     Q  N  T P        N ++Y+
Sbjct: 168 VRVYD-KMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRP--------NHYTYS 218

Query: 61  TSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPER 120
           T L  C     +Q    +H  V+K     +    N LL +Y K   + +A  +F+ + +R
Sbjct: 219 TMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQR 278

Query: 121 NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCV- 179
           N IS+  +I G+     F +A+  FS +   G E N F F+    VL S      C CV 
Sbjct: 279 NIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSI---VLAS------CGCVK 329

Query: 180 --------FACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL------------- 218
                      V K G  S  FVGTA+ID +S  G ++ A K F  +             
Sbjct: 330 DFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALI 389

Query: 219 ----FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
                N+  E+A+  F +M       N FT++ + KAC    ++      H   +K+  E
Sbjct: 390 AGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVE 449

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
            +L+VA +L++ YT+ G + NA ++F ++   DV+ W+ +I  Y+Q      A+ L  +M
Sbjct: 450 SNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKM 509

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQ-IHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
            +    P   TF++VL AC+    +  G +   S+V    +  +    + ++D+  + G+
Sbjct: 510 IEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQ 569

Query: 394 MENSVELFAE-SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLR 452
           +EN+++   + + K     W  ++        +  A  +  K+L+               
Sbjct: 570 LENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMAEYVAEKILD--------------- 614

Query: 453 ACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND----- 507
                  LEP               D  V   L +MYA+ G   DA     +M       
Sbjct: 615 -------LEPN--------------DATVYVTLSNMYAEVGRWADAENQRRLMEQKEISK 653

Query: 508 -----WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
                W EV+ N M   +S      E+ KV++ ++Q
Sbjct: 654 EPGCSWIEVN-NKMYKFFSHDKAHPEMPKVYEKLKQ 688



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 149/293 (50%), Gaps = 6/293 (2%)

Query: 345  TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
            T+   +   A    L  G  +H+ +V +GL    + +  LM  Y +CG++ N+ +LF + 
Sbjct: 805  TYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKI 864

Query: 405  PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
            P  N   W  +     + G   +A+  FS+M +E +   +    S+L+AC  L+    G 
Sbjct: 865  PNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGE 924

Query: 465  QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
             +H + +K +++ D  + +ALI MY+KCG +  A  VFD + D + V  NAM+SGY+ HG
Sbjct: 925  NMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHG 984

Query: 525  LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY 584
               E L +   MQQ G +PN +++  +++  S  G        F+ M AN G+EP +  +
Sbjct: 985  FVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTAN-GVEPDVVSW 1043

Query: 585  TSMVSLLGRAGH----LDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGR 633
            TS++S   +  H     D   ++++   F PS +   +LL AC    N+  G+
Sbjct: 1044 TSVISGFVQNFHNHEGFDAFKEMLDQ-GFCPSSVTISSLLPACTNVANLRHGK 1095



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/395 (23%), Positives = 176/395 (44%), Gaps = 25/395 (6%)

Query: 63   LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
            L++C    D +T   +H  +LK     D +  + L+ +Y K   +  A ++FD + +++ 
Sbjct: 911  LKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDL 970

Query: 123  ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
            +     + GY       EA+ L   + + G + N  ++   +     +G   +   VF  
Sbjct: 971  VVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRL 1030

Query: 183  VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNN 242
            +   G + +    T++I  F               + N    E  + F +M   GF P++
Sbjct: 1031 MTANGVEPDVVSWTSVISGF---------------VQNFHNHEGFDAFKEMLDQGFCPSS 1075

Query: 243  FTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEE 302
             T + +L AC  +  +R  K  HG A+    E D+YV  AL+D+Y K G IS A+ +F  
Sbjct: 1076 VTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYM 1135

Query: 303  MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG 362
            MP+++ + W+ +I  YA      +A+ELF +M ++    +  TF +VL AC+    ++LG
Sbjct: 1136 MPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELG 1195

Query: 363  NQIHSLVVRVGLLSDVFVSNALM-DVYAKCGRMENSVELFAESP-KRNHVTWNTMIV--- 417
              +   +     +       A M D+  + G++  + +L    P + +   W  ++    
Sbjct: 1196 ESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACR 1255

Query: 418  --GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
              G ++L EV    +     LE + P + +  S++
Sbjct: 1256 NHGNIELAEVAAEHLF---ELEPESPGSSLLLSNL 1287


>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
          Length = 787

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 213/578 (36%), Positives = 338/578 (58%), Gaps = 12/578 (2%)

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
           +P++ TF   L AC  L  +R  +S    A    Y+ D++V  +LL LY + G + +A +
Sbjct: 105 RPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVK 164

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           +F  MP++D + WS M+A +      +DA++++ RMR+  V  ++   + V+QAC     
Sbjct: 165 VFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARN 224

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           + +G  +H  ++R G+  DV  + +L+D+YAK G ++ +  +F     RN V+W+ MI G
Sbjct: 225 VRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISG 284

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           + Q G+  +A+ +F  M    +        S L AC+++  L+ G  VH   V+  +D +
Sbjct: 285 FAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVR-RFDFN 343

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
            ++  A IDMY+KCGS+  A+++F+M++D + + WNAMI+    HG   + L +F  M +
Sbjct: 344 CILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNE 403

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLD 598
            G RP++ TF  +LSA S+ GL+E+G+ +F  MV ++ I P  +HY  +V LL R+G ++
Sbjct: 404 TGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVE 463

Query: 599 KAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYA 658
           +A+ L+  +  +P+V IW ALL  C+ +  +E+G   A +IL+ +P+D     L+SN+YA
Sbjct: 464 EASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYA 523

Query: 659 MARSWEK-----------AASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNM 707
             + W+K            + K PG S IE +G  H F   D SH     I   +  L++
Sbjct: 524 ATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKLDL 583

Query: 708 KSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVD 767
           + RK GYIP    V  D+ E+ KE+ L  HSE+LA+AF L    P + + IIKNLR+C D
Sbjct: 584 EMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGD 643

Query: 768 CHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           CH AIK ISKI  REI++RD  RFHHF+DG CSC D+W
Sbjct: 644 CHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 173/383 (45%), Gaps = 29/383 (7%)

Query: 160 FTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL- 218
           FT  L     +G       V    +  G+  + FV ++L+  ++  G +  A KVF  + 
Sbjct: 111 FTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVFVRMP 170

Query: 219 -------------FNDCFE--EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKS 263
                        F    +  +A+  + +MR  G K +      V++AC     +R+  S
Sbjct: 171 RRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMGAS 230

Query: 264 AHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDL 323
            HG  L+    MD+  A +L+D+Y K+G +  A R+F  M  ++ + WS MI+ +AQ   
Sbjct: 231 VHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQ 290

Query: 324 SIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNA 383
           S +A+ LF  M+ + + P+    VS L AC+ +  L LG  +H  +VR     +  +  A
Sbjct: 291 SDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR-FDFNCILGTA 349

Query: 384 LMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPAT 443
            +D+Y+KCG + ++  LF     R+ + WN MI      G    A+ +F +M E  +   
Sbjct: 350 AIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPD 409

Query: 444 EVTYSSVLRACASLAALEPG------MQVHCLTVKANYDMDVVVANALIDMYAKCGSITD 497
             T++S+L A +    +E G      M  H     A           L+D+ A+ G + +
Sbjct: 410 HATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHY-----VCLVDLLARSGLVEE 464

Query: 498 ARLVFDMMNDWNEVS-WNAMISG 519
           A  +   M     V+ W A++SG
Sbjct: 465 ASDLLTSMKAEPTVAIWVALLSG 487



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 106/470 (22%), Positives = 207/470 (44%), Gaps = 53/470 (11%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +S ++  +L +C +  DL+   ++  +    G   D+F  + LL++Y +   + DA K+F
Sbjct: 107 DSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVF 166

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             MP R+ +++ T + G+  + Q ++A+ ++  +  +G + +       ++   +     
Sbjct: 167 VRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVR 226

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
           +   V   + + G   +    T+L+D ++  G ++ A +VF GL                
Sbjct: 227 MGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVF-GLMVHRNDVSWSAMISGF 285

Query: 220 --NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
             N   +EAL  F  M+A G +P++      L AC  +  +++ +S HG  ++  ++ + 
Sbjct: 286 AQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR-FDFNC 344

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
            +  A +D+Y+K G +++A+ +F  +  +D+I W+ MIA         DA+ LF  M + 
Sbjct: 345 ILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNET 404

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            + P+  TF S+L A +           HS +V  G L                GRM N 
Sbjct: 405 GMRPDHATFASLLSALS-----------HSGLVEEGKLW--------------FGRMVNH 439

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
              F  +P   H  +  ++    + G V +A  + + M  E    T   + ++L  C + 
Sbjct: 440 ---FKITPAEKH--YVCLVDLLARSGLVEEASDLLTSMKAE---PTVAIWVALLSGCLNN 491

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND 507
             LE G  +    ++   D DV V   + ++YA        R V  +M D
Sbjct: 492 KKLELGESIADNILELQPD-DVGVLALVSNLYAATKKWDKVRQVRKLMKD 540


>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 695

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 235/645 (36%), Positives = 358/645 (55%), Gaps = 29/645 (4%)

Query: 190 SNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQM 233
           ++ F+   LI  +S C  V  A ++FD +                 N    +AL  FS M
Sbjct: 51  ASTFLANHLITMYSHCADVPSAVRLFDAMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSM 110

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
              G  P  F  +   +A   L         H   ++  ++ +L+VA  L D+Y+KSG +
Sbjct: 111 CRAGLVPTQFALSSAARAAAALAARHAGAQLHCVGVRLGFDAELFVASNLADMYSKSGLL 170

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR-QAFVAPNQFTFVSVLQA 352
             A R+F++MP+KD + W+ MI  YA+      AV  F  MR +  V  +Q    SVL A
Sbjct: 171 VEACRVFDQMPQKDAVAWTAMIDGYAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSA 230

Query: 353 CATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA-ESPKRNHVT 411
              ++   L   IHS V++ G   +V V NAL D+YAK   M+N+  +   +    N V+
Sbjct: 231 SGGLKDGWLARAIHSCVMKSGFEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVS 290

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
             ++I GY++   + KA++MF ++  + V   E T+SS+++ CA  A LE G Q+H   +
Sbjct: 291 ATSLIDGYIETDCIEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVI 350

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
           K +   D  V++ L+DMY KCG I+ +  +F  +    +++WNA I+  + HG   E ++
Sbjct: 351 KTSLISDSFVSSTLLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIR 410

Query: 532 VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLL 591
            FD M   G RPN++TFV +L+ACS+ GL+++G  YF SM  ++GIEP  EHY+ ++ + 
Sbjct: 411 AFDRMTSSGIRPNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMY 470

Query: 592 GRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHV 651
           GRAG LD+A K I  +P +P+   W +LLGAC +  N E+G ++A +++  EP++   HV
Sbjct: 471 GRAGRLDEAEKFIGEMPVKPNAYGWCSLLGACRMRGNKELGEIAADNMMKLEPDNTGVHV 530

Query: 652 LLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRG 700
            LS IYA    WE   +           K PG SW+++    H F + D SH     I  
Sbjct: 531 SLSGIYASLGQWEDVKAVRKLMRDNRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQEKIYE 590

Query: 701 MLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIK 760
            LE L  + ++ GY+PD   +  ++ +  K+R L  HSE++A+AFAL  MP + PI + K
Sbjct: 591 KLEELYERIKEEGYVPDTRFLPCNLEDTAKQRILRYHSERIAVAFALISMPATKPIIVKK 650

Query: 761 NLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           NLRIC DCH+A+K ISK+  R+II+RD  RFHHF  G CSCGD+W
Sbjct: 651 NLRICADCHSALKFISKVENRDIIVRDNSRFHHFVKGGCSCGDYW 695



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 139/497 (27%), Positives = 242/497 (48%), Gaps = 23/497 (4%)

Query: 50  SVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQ-VLKKGNCLDLFATNVLLNVYVKLNRLP 108
           S+    S   A  LQSC +  DL+    +H + VL        F  N L+ +Y     +P
Sbjct: 11  SLDTATSLRLAAPLQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVP 70

Query: 109 DATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLV 168
            A +LFD MP  N +S+ T + G T +S   +A+  FS++ R G     FA ++  +   
Sbjct: 71  SAVRLFDAMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAA 130

Query: 169 SMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------- 218
           ++        +     +LG D+  FV + L D +S  G +  A +VFD +          
Sbjct: 131 ALAARHAGAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTA 190

Query: 219 ------FNDCFEEALNFFSQMRAVGF-KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT 271
                  N   E A+  F  MR  G    +      VL A  GL    +A++ H C +K+
Sbjct: 191 MIDGYAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKS 250

Query: 272 CYEMDLYVAVALLDLYTKSGEISNARRIFE-EMPKKDVIPWSFMIARYAQTDLSIDAVEL 330
            +E ++ V  AL D+Y K+ ++ NA R+ + +    +V+  + +I  Y +TD    A+ +
Sbjct: 251 GFEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLM 310

Query: 331 FCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAK 390
           F  +R+  V PN+FTF S+++ CA    L+ G Q+H+ V++  L+SD FVS+ L+D+Y K
Sbjct: 311 FIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGK 370

Query: 391 CGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
           CG +  S++LF E      + WN  I    Q G   +A+  F +M    +    +T+ S+
Sbjct: 371 CGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSL 430

Query: 451 LRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMND 507
           L AC+    ++ G++ +  ++K ++ ++    +   +IDMY + G + +A + + +M   
Sbjct: 431 LTACSHAGLVDEGLK-YFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVK 489

Query: 508 WNEVSWNAMISGYSMHG 524
            N   W +++    M G
Sbjct: 490 PNAYGWCSLLGACRMRG 506



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 187/404 (46%), Gaps = 40/404 (9%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           +HC  ++ G   +LF  + L ++Y K   L +A ++FD+MP+++ +++   I GY  +  
Sbjct: 141 LHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGN 200

Query: 138 FVEAVGLFSTLHREG------HEL-NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDS 190
              AV  F  + REG      H L +  + +  LK     GW  L   + +CV K G + 
Sbjct: 201 LEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKD----GW--LARAIHSCVMKSGFEQ 254

Query: 191 NAFVGTALIDAFSVCGCVEFARKV----------------FDGLF-NDCFEEALNFFSQM 233
              V  AL D ++    ++ A +V                 DG    DC E+AL  F ++
Sbjct: 255 EVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIEL 314

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
           R  G +PN FTF+ ++K C     +      H   +KT    D +V+  LLD+Y K G I
Sbjct: 315 RRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLI 374

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
           S + ++F+E+     I W+  I   AQ     +A+  F RM  + + PN  TFVS+L AC
Sbjct: 375 SLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTAC 434

Query: 354 ATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVT 411
           +    +D G    +S+    G+       + ++D+Y + GR++ + +   E P K N   
Sbjct: 435 SHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYG 494

Query: 412 WNTMI-----VGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
           W +++      G  +LGE+    +M    LE       V+ S +
Sbjct: 495 WCSLLGACRMRGNKELGEIAADNMM---KLEPDNTGVHVSLSGI 535



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 136/259 (52%), Gaps = 5/259 (1%)

Query: 350 LQACATMEGLDLGNQIHS-LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRN 408
           LQ+C     L LG  +H+ LV+     +  F++N L+ +Y+ C  + ++V LF   P+ N
Sbjct: 24  LQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLFDAMPRPN 83

Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHC 468
            V+W T++ G  Q      A+  FS M    +  T+   SS  RA A+LAA   G Q+HC
Sbjct: 84  LVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAGAQLHC 143

Query: 469 LTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG-LSA 527
           + V+  +D ++ VA+ L DMY+K G + +A  VFD M   + V+W AMI GY+ +G L A
Sbjct: 144 VGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGNLEA 203

Query: 528 EVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAY-FKSMVANYGIEPCIEHYTS 586
            V+   D+ ++     +      VLSA  +GGL +   A    S V   G E  +    +
Sbjct: 204 AVIAFRDMRREGLVGADQHVLCSVLSA--SGGLKDGWLARAIHSCVMKSGFEQEVAVRNA 261

Query: 587 MVSLLGRAGHLDKAAKLIE 605
           +  +  +A  +D AA++++
Sbjct: 262 LTDMYAKAADMDNAARVVK 280


>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 802

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 263/845 (31%), Positives = 405/845 (47%), Gaps = 140/845 (16%)

Query: 46  PITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLN 105
           P T   +  +S   A  LQ C    +      IH + +K G     +  N LL+ Y    
Sbjct: 13  PRTAMAAASDSDHCARLLQRCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYAGPA 72

Query: 106 R-----LPDATKLFDEMP--ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPF 158
                   +A +LFDE+P  +RN  ++ + +  Y  S +  +A  +F+    E  E +P 
Sbjct: 73  AGGGGGFREARRLFDEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFA----EMPERDPV 128

Query: 159 AFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL 218
           ++T                                          V G     R      
Sbjct: 129 SWTVM----------------------------------------VVGLNRVGR------ 142

Query: 219 FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
               F EA+  F  M   G  P  FT   VL +C   +   V +  H   +K      + 
Sbjct: 143 ----FGEAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVP 198

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDV------------------------------ 308
           VA ++L++Y K G+   AR +FE MP++ V                              
Sbjct: 199 VANSVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRT 258

Query: 309 -IPWSFMIARYAQTDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQACATMEGLDLGNQIH 366
            + W+ +IA Y Q  L+  A+  F RM   + +AP++FT  SVL ACA +  + +G Q+H
Sbjct: 259 IVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVH 318

Query: 367 SLVVR-----VGLLSDVFVS----------------------------NALMDVYAKCGR 393
           + ++R     +G +++  +S                             AL++ Y K G 
Sbjct: 319 AYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGD 378

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           M+++ E+F     R+ V W  MIVGY Q G   +AM +F  M+         T ++VL  
Sbjct: 379 MKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSV 438

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE--V 511
           CASLA LE G Q+HC  +++  +    V+N+++ MYA+ GS+  AR VFD ++ W +  V
Sbjct: 439 CASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVH-WRKETV 497

Query: 512 SWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSM 571
           +W +MI   + HGL  + + +F+ M + G +P+ +TFVGVLSAC++ G +++G+ YF+ +
Sbjct: 498 TWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQL 557

Query: 572 VANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEI 631
              +GI P + HY  MV LL RAG   +A + I+ +P +P  + W +LL AC +H N ++
Sbjct: 558 QDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADL 617

Query: 632 GRLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQG 680
             L+A+ +L  +P +   +  LSN+Y+    W           +K+  KE G SW     
Sbjct: 618 AELAAEKLLSIDPGNSGAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTHIGN 677

Query: 681 MVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEK 740
            VH F A D  H   + +      +    +KAG++PDL +VL DV ++ KE  L  HSEK
Sbjct: 678 RVHVFGADDVLHPQRDTVYRTAAKMWDDIKKAGFVPDLQSVLHDVDDELKEEMLSRHSEK 737

Query: 741 LALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCS 800
           LA+AF L   P  + +RI+KNLR+C DCHTAIK ISK+  REII+RD  RFHHF+DG CS
Sbjct: 738 LAIAFGLVSTPEKTTLRIMKNLRVCNDCHTAIKFISKVADREIILRDATRFHHFKDGFCS 797

Query: 801 CGDFW 805
           C D+W
Sbjct: 798 CKDYW 802


>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
 gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
          Length = 747

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 252/801 (31%), Positives = 394/801 (49%), Gaps = 131/801 (16%)

Query: 82  VLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEA 141
           ++K G    ++  N L+N+Y K     DA  LF+EMP + T S+ T + GY    +  +A
Sbjct: 1   MVKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKA 60

Query: 142 VGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDA 201
             +F                  + V  S+ W  +                          
Sbjct: 61  HQVFD----------------LIPVRDSVSWTTI-------------------------- 78

Query: 202 FSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVA 261
             + G  +  R          FE+A+  F  M      P  FT   VL +C    +  + 
Sbjct: 79  --IVGYNQMGR----------FEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIG 126

Query: 262 KSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP----------------- 304
           K  H   +K      + VA +LL++Y K+G++  A+ +F+ M                  
Sbjct: 127 KKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNC 186

Query: 305 --------------KKDVIPWSFMIARYAQTDLSIDAVELFCR-MRQAFVAPNQFTFVSV 349
                         ++D++ W+ MIA   Q     +A++ F   ++   + P++F+  S 
Sbjct: 187 GRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASA 246

Query: 350 LQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES----- 404
           L ACA +E L  G QIH  +VR    +   V NAL+ +YAK G +E +  +  +S     
Sbjct: 247 LSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDL 306

Query: 405 -------------------PKR---------NHVTWNTMIVGYVQLGEVGKAMIMFSKML 436
                              P R         + V W  MIVGYVQ G    A+ +F  M+
Sbjct: 307 DVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMV 366

Query: 437 EEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSIT 496
            E       T +++L A +S+ +L  G Q+H   +++   +   V NAL  MYAK GSI 
Sbjct: 367 SEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSIN 426

Query: 497 DARLVFDMM-NDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSAC 555
            AR VF+++  + + VSW +MI   + HGL  E +++F+ M   G +P+++T+VGVLSAC
Sbjct: 427 GARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSAC 486

Query: 556 SNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMI 615
           ++GGL+EQG +YF  M   + I+P + HY  MV L GRAG L +A K +E +P +P V+ 
Sbjct: 487 THGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIA 546

Query: 616 WRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-------- 667
           W +LL +C ++ NV++ +++A+ +L  EP +   +  L+N+Y+    W+ AA        
Sbjct: 547 WGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKA 606

Query: 668 ---SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRD 724
               KE GLSW++ Q   H F   D  H   + I  M++ +  + +K G+ PD  +VL D
Sbjct: 607 RGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMMDKIWKEIKKMGFAPDTESVLHD 666

Query: 725 VREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREII 784
           +  + K++ L  HSEKLA+AF +   P ++ +RI+KNLR+C DCH AIK ISK+V REII
Sbjct: 667 LEVEVKDQILRYHSEKLAIAFGIISTPENTTLRIMKNLRVCNDCHNAIKFISKLVDREII 726

Query: 785 IRDVHRFHHFQDGCCSCGDFW 805
           +RD  RFHHF+DG CSC D+W
Sbjct: 727 VRDATRFHHFKDGSCSCKDYW 747



 Score = 39.3 bits (90), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 55/259 (21%), Positives = 97/259 (37%), Gaps = 27/259 (10%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           NS + A  L +      L     IH   ++ G  L     N L  +Y K   +  A K+F
Sbjct: 373 NSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVF 432

Query: 115 DEMPE-RNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           + + + R+T+S+ + I          EA+ LF  +   G + +   +   L      G  
Sbjct: 433 NLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLV 492

Query: 174 ELCPCVFAC---VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFF 230
           E     F     V+K+  D        ++D F   G +               +EA  F 
Sbjct: 493 EQGRSYFDLMKNVHKI--DPTLSHYACMVDLFGRAGLL---------------QEAYKFV 535

Query: 231 SQMRAVGFKPNNFTFAFVLKACLGLDTIRVAK-SAHGCALKTCYEMDLYVAVALLDLYTK 289
             M     +P+   +  +L +C     + +AK +A    L        Y A+A  ++Y+ 
Sbjct: 536 ENMP---MEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALA--NVYSS 590

Query: 290 SGEISNARRIFEEMPKKDV 308
            G+  +A +I + M  + V
Sbjct: 591 CGKWDDAAKIRKLMKARGV 609


>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
 gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
          Length = 684

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 214/578 (37%), Positives = 336/578 (58%), Gaps = 12/578 (2%)

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
           +P++ TF   L AC  L  +  A++    A    Y  D++V  ALL +Y++ G + +A R
Sbjct: 108 RPDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVFVCSALLHVYSRCGAMGDAIR 167

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           +F+ MP+KD + WS M+A +      ++A+ ++ RMR+  VA ++   V V+QAC     
Sbjct: 168 VFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQACTLTGN 227

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
             +G  +H   +R G+  DV ++ +L+D+YAK G  + + ++F   P RN V+WN +I G
Sbjct: 228 TRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWNALISG 287

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           + Q G   +A+ +F +M    +        S L ACA +  L+ G  +H   ++   +  
Sbjct: 288 FAQNGHADEALDLFREMSTSGLQPDSGALVSALLACADVGFLKLGKSIHGFILR-RLEFQ 346

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
            ++  A++DMY+KCGS+  AR +F+ ++  + V WNAMI+    HG   + L +F  + +
Sbjct: 347 CILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIACCGTHGCGHDALALFQELNE 406

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLD 598
            G +P++ TF  +LSA S+ GL+E+G+ +F  M+  +GIEP  +H   +V LL R+G ++
Sbjct: 407 TGIKPDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIEPTEKHCVCVVDLLARSGLVE 466

Query: 599 KAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYA 658
           +A +++  +  +P++ IW ALL  C+ +  +E+G   A+ IL+ +PED     L+SN+YA
Sbjct: 467 EANEMLASMHTEPTIPIWVALLSGCLNNKKLELGETIAKKILESQPEDIGVLALVSNLYA 526

Query: 659 MARSWEK-----------AASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNM 707
            A+ W+K            + K PG S IE  G  H F   D SH     I  M+  L+ 
Sbjct: 527 AAKKWDKVREIRKLMKDSGSKKVPGYSLIEVHGTRHAFVMEDQSHPQHQEILKMISKLSF 586

Query: 708 KSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVD 767
           + RK GY+P    V  D+ ED KE+ L  HSE+LA+AF L    P + + IIKNLR+C D
Sbjct: 587 EMRKMGYVPRTEFVYHDLDEDVKEQLLSYHSERLAIAFGLLNTSPGTRLVIIKNLRVCGD 646

Query: 768 CHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           CH AIK ISKIV REI++RD  RFHHF+DG CSCGD+W
Sbjct: 647 CHDAIKYISKIVDREIVVRDAKRFHHFKDGACSCGDYW 684



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 109/343 (31%), Positives = 178/343 (51%), Gaps = 6/343 (1%)

Query: 287 YTKSGEISNARRIFEEMPK-KDVIP-WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
           Y + G +  A       P  +  IP W+ ++A  ++      A+ +F R   +   P+  
Sbjct: 54  YARVGALDAAESTLAASPSSRSCIPAWNALLAARSRAGSPGAALRVF-RALPSSARPDST 112

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           TF   L ACA +  LD    +       G   DVFV +AL+ VY++CG M +++ +F   
Sbjct: 113 TFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVFVCSALLHVYSRCGAMGDAIRVFDGM 172

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
           P+++HV W+TM+ G+V  G   +A+ M+S+M E  V   EV    V++AC        G 
Sbjct: 173 PRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQACTLTGNTRMGA 232

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
            VH   ++    MDVV+A +L+DMYAK G    AR VF MM   N VSWNA+ISG++ +G
Sbjct: 233 SVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWNALISGFAQNG 292

Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY 584
            + E L +F  M   G +P++   V  L AC++ G L+ G++    ++     + CI   
Sbjct: 293 HADEALDLFREMSTSGLQPDSGALVSALLACADVGFLKLGKSIHGFILRRLEFQ-CILG- 350

Query: 585 TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
           T+++ +  + G L+ A KL   +  +  +++W A++  C  H 
Sbjct: 351 TAVLDMYSKCGSLESARKLFNKLSSR-DLVLWNAMIACCGTHG 392



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 182/392 (46%), Gaps = 47/392 (11%)

Query: 160 FTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL- 218
           FT  L     +G  +    V    +  G+  + FV +AL+  +S CG +  A +VFDG+ 
Sbjct: 114 FTLALTACARLGDLDAAEAVRVRAFAAGYGRDVFVCSALLHVYSRCGAMGDAIRVFDGMP 173

Query: 219 -------------FNDCFE--EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKS 263
                        F       EAL  +S+MR  G   +      V++AC      R+  S
Sbjct: 174 RKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQACTLTGNTRMGAS 233

Query: 264 AHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDL 323
            HG  L+    MD+ +A +L+D+Y K+G    AR++F  MP ++ + W+ +I+ +AQ   
Sbjct: 234 VHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWNALISGFAQNGH 293

Query: 324 SIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNA 383
           + +A++LF  M  + + P+    VS L ACA +  L LG  IH  ++R  L     +  A
Sbjct: 294 ADEALDLFREMSTSGLQPDSGALVSALLACADVGFLKLGKSIHGFILRR-LEFQCILGTA 352

Query: 384 LMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPAT 443
           ++D+Y+KCG +E++ +LF +   R+ V WN MI      G    A+ +F ++ E  +   
Sbjct: 353 VLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIACCGTHGCGHDALALFQELNETGIKPD 412

Query: 444 EVTYSSVLRACASLAALEPG---------------MQVHCLTVKANYDMDVVVANALIDM 488
             T++S+L A +    +E G                + HC+ V              +D+
Sbjct: 413 HATFASLLSALSHSGLVEEGKFWFDRMITEFGIEPTEKHCVCV--------------VDL 458

Query: 489 YAKCGSITDARLVFDMMNDWNEVS-WNAMISG 519
            A+ G + +A  +   M+    +  W A++SG
Sbjct: 459 LARSGLVEEANEMLASMHTEPTIPIWVALLSG 490



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 101/432 (23%), Positives = 197/432 (45%), Gaps = 27/432 (6%)

Query: 26  RGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKK 85
           R  S  AAL   +   S+  P        +S ++  +L +C +  DL  A  +  +    
Sbjct: 89  RAGSPGAALRVFRALPSSARP--------DSTTFTLALTACARLGDLDAAEAVRVRAFAA 140

Query: 86  GNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLF 145
           G   D+F  + LL+VY +   + DA ++FD MP ++ +++ T + G+  + + VEA+G++
Sbjct: 141 GYGRDVFVCSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMY 200

Query: 146 STLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVC 205
           S +   G   +       ++     G   +   V     + G   +  + T+L+D ++  
Sbjct: 201 SRMREHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKN 260

Query: 206 GCVEFARKVF-----------DGLF-----NDCFEEALNFFSQMRAVGFKPNNFTFAFVL 249
           G  + AR+VF           + L      N   +EAL+ F +M   G +P++      L
Sbjct: 261 GHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSAL 320

Query: 250 KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
            AC  +  +++ KS HG  L+   E    +  A+LD+Y+K G + +AR++F ++  +D++
Sbjct: 321 LACADVGFLKLGKSIHGFILRR-LEFQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLV 379

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN-QIHSL 368
            W+ MIA         DA+ LF  + +  + P+  TF S+L A +    ++ G      +
Sbjct: 380 LWNAMIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRM 439

Query: 369 VVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT-WNTMIVGYVQLGEVGK 427
           +   G+         ++D+ A+ G +E + E+ A       +  W  ++ G +   ++  
Sbjct: 440 ITEFGIEPTEKHCVCVVDLLARSGLVEEANEMLASMHTEPTIPIWVALLSGCLNNKKLEL 499

Query: 428 AMIMFSKMLEEQ 439
              +  K+LE Q
Sbjct: 500 GETIAKKILESQ 511


>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
           [Vitis vinifera]
          Length = 836

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 275/818 (33%), Positives = 421/818 (51%), Gaps = 86/818 (10%)

Query: 62  SLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNV--LLNVYVK------LNRLPDATKL 113
           SL+ C   + L+    +HCQ+ K G  LD   + +  L+N   +      L+    A +L
Sbjct: 31  SLRCCKTLNQLKQ---LHCQITKNG--LDQIPSTLTKLVNAGAEIASPESLDYARKAFEL 85

Query: 114 FDEMPERNTISFV--TTIQGYTVSSQFVEAVGLFSTLHREG----HELNPFAFTAFLKVL 167
           F E    +   F+  + I+GY+ +    EA+ L+  +   G    H   PF  +   K+ 
Sbjct: 86  FKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKI- 144

Query: 168 VSMGWAELCPC--VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------ 219
                A  C    V   V K+G + + F+   LI  ++ CG ++   KVF+G+       
Sbjct: 145 -----AAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVS 199

Query: 220 ----------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCAL 269
                      D  +EA++ F +M   G +P++ T   V+ AC  L  + + +       
Sbjct: 200 WTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIG 259

Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVE 329
           +   +++  +  AL+D+Y K G I  A+R+F+E   ++++ ++ +++ YA+  L+ +A+ 
Sbjct: 260 ELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALA 319

Query: 330 LFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYA 389
           +   M Q    P++ T +S + A A +  L  G   H  V+R GL     + N ++D+Y 
Sbjct: 320 ILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYM 379

Query: 390 KCGR-------------------------------MENSVELFAESPKRNHVTWNTMIVG 418
           KCG+                               +E++ E+F + P+RN V WNTMI G
Sbjct: 380 KCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISG 439

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
            VQ      A+ +F +M  E + A  VT   +  AC  L A E    VH    K     D
Sbjct: 440 LVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCD 499

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
           + +  AL+DM+A+CG    A  VF+ M + +  +W A I   +M G       +F+ M  
Sbjct: 500 MRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLI 559

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLD 598
           +G +P+ + FV VL+ACS+GG +EQG   F S++ ++GI P IEHY  MV LLGRAG L 
Sbjct: 560 QGVKPDVVLFVQVLTACSHGGQVEQGLHIF-SLMEDHGISPQIEHYGCMVDLLGRAGLLR 618

Query: 599 KAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYA 658
           +A  LI+ +P +P+ ++W +LL AC +H NVE+   +A+ I +  P+    HVLLSNIYA
Sbjct: 619 EAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYA 678

Query: 659 MARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNM 707
            A  W           EK   K PG S ++  G++H F +GD SH +M  I  ML+ +N 
Sbjct: 679 SAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNC 738

Query: 708 KSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVD 767
           +   AG+IPDLS VL DV E EKE  L  HSEKLA+AF L     S PIR++KNLR+C D
Sbjct: 739 RFSDAGHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNLRMCSD 798

Query: 768 CHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           CH+  K+ S I  REII+RD +RFH F+ G CSC D+W
Sbjct: 799 CHSFAKMASIIYNREIIVRDNNRFHFFRQGLCSCCDYW 836



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 116/517 (22%), Positives = 231/517 (44%), Gaps = 48/517 (9%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N +++   L  C +       + +H  V+K G   D+F  N L++ Y +   +    K+F
Sbjct: 130 NHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVF 189

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           + M ERN +S+ + I GY    +  EAV LF  +   G   +       +     +   +
Sbjct: 190 EGMSERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLD 249

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG-------LFNDCF---- 223
           +   V A + +LG   N  +  AL+D +  CG ++ A+++FD        L+N       
Sbjct: 250 MGERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYA 309

Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE---- 274
                 EAL    +M   G +P+  T    + A   L  +   K  HG  ++   E    
Sbjct: 310 RQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDS 369

Query: 275 -----MDLY-------VAVALLDL---------------YTKSGEISNARRIFEEMPKKD 307
                +D+Y       +A  + DL               + ++G++ +A  +F ++P+++
Sbjct: 370 IGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERN 429

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
            + W+ MI+   Q  L  DA+ELF  M+   +  ++ T + +  AC  +   +L   +H+
Sbjct: 430 AVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHT 489

Query: 368 LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK 427
            + + G+  D+ ++ AL+D++A+CG  ++++++F +  +R+   W   I      G    
Sbjct: 490 YIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEG 549

Query: 428 AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALID 487
           A  +F++ML + V    V +  VL AC+    +E G+ +  L         +     ++D
Sbjct: 550 ATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVD 609

Query: 488 MYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
           +  + G + +A  L+  M  + N+V W ++++   +H
Sbjct: 610 LLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVH 646


>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
 gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 266/828 (32%), Positives = 397/828 (47%), Gaps = 140/828 (16%)

Query: 66  CIQN-DDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTIS 124
           C QN      A T+H  V+  G  L     N L+++Y K +    A KLFDE+P+ + I+
Sbjct: 22  CPQNLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIA 81

Query: 125 FVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVY 184
             T I  Y+       A  +F+    +  +      T F   +++ G++ +         
Sbjct: 82  RTTLITAYSALGNLKMAREIFNETPLDMRD------TVFYNAMIT-GYSHMND------- 127

Query: 185 KLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFT 244
             GH +                                    +  F  MR   F+P++FT
Sbjct: 128 --GHSA------------------------------------IELFRAMRWANFQPDDFT 149

Query: 245 FAFVLKA-CLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG---------EIS 294
           FA VL A  L     R     HG  +K   E+   V  ALL +Y K            ++
Sbjct: 150 FASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLMA 209

Query: 295 NARRIFEEMPKKDV-------------------------------IPWSFMIARYAQTDL 323
           +AR++F+EMPK++                                I W+ MI+ Y    L
Sbjct: 210 SARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGL 269

Query: 324 SIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL--------- 374
             DA+ LF +MR   V  ++ T+ SV+ ACA      LG Q+H+ +++  L         
Sbjct: 270 FEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLS 329

Query: 375 --------------------------LSDVFVSNALMDVYAKCGRMENSVELFAESPKRN 408
                                     + D+   N L+  Y   GRME +   FA+ P++N
Sbjct: 330 VGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKN 389

Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHC 468
            +TW  MI G  Q G   +A+ +F++M  +     +  ++  + AC+ L ALE G Q+H 
Sbjct: 390 LLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHA 449

Query: 469 LTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAE 528
             V   +D  + V NA+I MYA+CG +  AR +F  M   + VSWN+MI+    HG   +
Sbjct: 450 QIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVK 509

Query: 529 VLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMV 588
            +++++ M + G  P+  TF+ VLSACS+ GL+E+G  YF SM+ NYGI P  +HY  M+
Sbjct: 510 AIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMI 569

Query: 589 SLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEA 648
            L  RAG    A  +I+ +PF+    IW ALL  C  H N+++G  +A+ +    P+ + 
Sbjct: 570 DLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFKLIPQHDG 629

Query: 649 THVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNI 697
           T+VLLSN+YA    W           ++   KEP  SW E +  VH F   DT H ++  
Sbjct: 630 TYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVENKVHVFLVDDTVHPEVLS 689

Query: 698 IRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIR 757
           I   LE LN++ +K GYIPD   VL D+  + KE  L  HSEKLA+AF L K+P  + +R
Sbjct: 690 IYNYLEKLNLEMKKIGYIPDTKYVLHDMESEHKEYALSTHSEKLAVAFGLMKLPQGATVR 749

Query: 758 IIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           + KNLRIC DCH AIK +SK+V REI++RD  RFHHF++G CSC ++W
Sbjct: 750 VFKNLRICGDCHNAIKFMSKVVGREIVVRDGKRFHHFKNGECSCRNYW 797



 Score = 40.4 bits (93), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 35/169 (20%), Positives = 69/169 (40%), Gaps = 5/169 (2%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N +++A ++ +C     L+    +H Q++  G+   L   N ++ +Y +   +  A  
Sbjct: 422 EPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAART 481

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +F  MP  + +S+ + I         V+A+ L+  + +EG   +   F   L      G 
Sbjct: 482 MFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGL 541

Query: 173 AELCPCVFACV---YKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL 218
            E     F  +   Y +    + +    +ID F   G    A+ V D +
Sbjct: 542 VEEGNRYFNSMLENYGIAPGEDHY--ARMIDLFCRAGKFSDAKNVIDSM 588


>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
 gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
 gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
          Length = 770

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 239/699 (34%), Positives = 371/699 (53%), Gaps = 41/699 (5%)

Query: 147 TLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCG 206
           T+  EG  +    +   L   V  G       V   + K G  ++ FV T+L++A+  C 
Sbjct: 68  TMLTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCS 127

Query: 207 CVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLK 250
               AR++FDG+                 N      L  F +M  +G  P+++T    L 
Sbjct: 128 AARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLN 187

Query: 251 ACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIP 310
           ACL    + + K  HG A+K   E    +  +L  LY K G + +A R F  +P+K+VI 
Sbjct: 188 ACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVIT 247

Query: 311 WSFMIARYAQTDLSID-AVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
           W+ MI+  A+ +  ++  + LF  M    V PN+FT  SV+  C T   L+LG Q+ +  
Sbjct: 248 WTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFS 307

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK-- 427
            ++G  +++ V N+ M +Y + G  + ++ LF +    + +TWN MI GY Q+ +  K  
Sbjct: 308 FKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDD 367

Query: 428 ---------AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
                    A+ +F  +    +     T+SS+L  C+++ ALE G Q+H  T+K+ +  D
Sbjct: 368 LQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSD 427

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
           VVV +AL++MY KCG I DA   F  M     V+W +MISGYS HG   E +++F+ M+ 
Sbjct: 428 VVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRL 487

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLD 598
            G RPN +TFV +LSACS  GL+E+ E YF  M   Y IEP ++HY  M+ +  R G ++
Sbjct: 488 AGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVE 547

Query: 599 KAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYA 658
            A   I+   F+P+  IW +L+  C  H N+E+   +A  +L+ +P+   T++LL N+Y 
Sbjct: 548 DAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYI 607

Query: 659 MARSWEKAA-------SKEPGL----SWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNM 707
               W+  A        ++ G+    SWI  +  V++FRA D +H     +  +LE L  
Sbjct: 608 STERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLE 667

Query: 708 KSRKAGYIPDLSAVLRDVREDEKER--YLWVHSEKLALAFALFKMPPSSPIRIIKNLRIC 765
           K++  GY P  +A L D  +DEK     L  HSE+LA+A  L + PP + +R+ KN+ +C
Sbjct: 668 KAKAIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATVRVTKNITMC 727

Query: 766 VDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
            DCH++IK+ S +  REII+RD  R H F+DG CSCGDF
Sbjct: 728 RDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 766



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 146/501 (29%), Positives = 245/501 (48%), Gaps = 32/501 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
            S  Y   L  C++   L  A  +H  + K G   D+F    L+N Y++ +   DA +LF
Sbjct: 77  QSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLF 136

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D MPERN +++   + GYT++SQ    + +F  +   G   + +   A L   ++    +
Sbjct: 137 DGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVD 196

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
           L   V     K G +S   +G +L   ++  G ++ A + F  +                
Sbjct: 197 LGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACA 256

Query: 220 --NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
              +C E  ++ F  M   G  PN FT   V+  C     + + K     + K   E +L
Sbjct: 257 EDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNL 316

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQ------TDL-----SID 326
            V  + + LY + GE   A R+FE+M    +I W+ MI+ YAQ       DL        
Sbjct: 317 PVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQ 376

Query: 327 AVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMD 386
           A+ +F  ++++ + P+ FTF S+L  C+ M  L+ G QIH+  ++ G LSDV V++AL++
Sbjct: 377 ALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVN 436

Query: 387 VYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVT 446
           +Y KCG ++++ + F E P R  VTW +MI GY Q G+  +A+ +F +M    V   E+T
Sbjct: 437 MYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEIT 496

Query: 447 YSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFD 503
           + S+L AC S A L    + +   +K  Y ++ VV +   +IDM+ + G + DA   +  
Sbjct: 497 FVSLLSAC-SYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKR 555

Query: 504 MMNDWNEVSWNAMISGYSMHG 524
              + NE  W+++++G   HG
Sbjct: 556 TGFEPNEAIWSSLVAGCRSHG 576



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 108/266 (40%), Gaps = 32/266 (12%)

Query: 50  SVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD 109
           SV + +  ++++ L  C     L+    IH Q +K G   D+   + L+N+Y K   + D
Sbjct: 387 SVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQD 446

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A K F EMP R  +++ + I GY+   Q  EA+ LF  +   G   N   F + L     
Sbjct: 447 ANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSY 506

Query: 170 MGWAELCPCVFACVYK-------LGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDC 222
            G  E     F  + K       + H         +ID F   G VE A           
Sbjct: 507 AGLVEEAEHYFDMMKKEYCIEPVVDHYG------CMIDMFVRLGRVEDA----------- 549

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
                  FS ++  GF+PN   ++ ++  C     + +A  A    L+      +   + 
Sbjct: 550 -------FSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLE-LKPKGIETYIL 601

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDV 308
           LL++Y  +    +  R+ + M ++DV
Sbjct: 602 LLNMYISTERWQDVARVRKLMKQEDV 627


>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
 gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
          Length = 615

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 216/596 (36%), Positives = 337/596 (56%), Gaps = 14/596 (2%)

Query: 221 DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
           D   EA++   Q  A G          +++ C G   +   +  H        +   +++
Sbjct: 23  DAIREAVDLLEQSGAAG---GTGDLEQLIRRCAGAKALEEGRRIHRWMDSGTLDRPRFLS 79

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
             L+D+Y K G +  A+R+F+ M  K+V  W+ ++A + Q+   ++A++LF RM Q    
Sbjct: 80  NLLVDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGEL 139

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           P++   +  + +C   + L  G +IHS     G+ SD+  +NA++++Y KCG +  +  +
Sbjct: 140 PDRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAV 199

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F   P++N ++W+TMI  + Q     +A++ F  M +E +    +TY SVL A  S+ AL
Sbjct: 200 FTRMPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGAL 259

Query: 461 EPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY 520
           E G  +H   V A  D  +VV N L++MY KCGS  DAR VFD M + N VSWNAM++ Y
Sbjct: 260 ELGKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAY 319

Query: 521 SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPC 580
             +G S E L +FD M   G RPN++TFV +L  CS+ G  +   ++F  M  ++GI P 
Sbjct: 320 GQNGRSREALALFDSMDLEGVRPNDITFVTILYCCSHSGKFKDAVSHFVEMRQDFGITPR 379

Query: 581 IEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHIL 640
             H+  ++ +LGR+G L++A +LI+ +P     ++W +LL AC+ H + +    +A+   
Sbjct: 380 EVHFGCLIDMLGRSGKLEEAEELIQAMPVPADAVLWTSLLCACVTHKDEDRAARAAEEAF 439

Query: 641 DFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGD 689
             EP   A +++LSN+YA  + W++AA            K+ G SWIE    VH F AGD
Sbjct: 440 QREPRCAAAYIMLSNLYAALKKWDEAAKVRKRMEQAGVRKQAGRSWIEIDKQVHEFVAGD 499

Query: 690 TSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFK 749
           + H D + I   L+ L  + R  GY PD   V+  + E+EK+  L+ HSEKLA+AF +  
Sbjct: 500 SIHPDKSRIFKTLQRLMSEMRIKGYEPDRKVVIHSMEEEEKDEVLFYHSEKLAVAFGIAS 559

Query: 750 MPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            PP +P+ I+KNLR+C DCH+AIK IS +  R I +RD +RFHHF  G CSCGD+W
Sbjct: 560 TPPRTPLCIVKNLRVCSDCHSAIKFISGVEGRRITVRDSNRFHHFDRGECSCGDYW 615



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 96/354 (27%), Positives = 173/354 (48%), Gaps = 20/354 (5%)

Query: 189 DSNAFVGTALIDAFSVCGCVEFARKVFDGL-FNDCFE---------------EALNFFSQ 232
           D   F+   L+D +  CG +  A++VFD +   + F                EA+  F +
Sbjct: 73  DRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHR 132

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           M   G  P+       + +C     +   +  H  A     + DL  A A++++Y K G 
Sbjct: 133 MCQEGELPDRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINMYGKCGS 192

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           I  A  +F  MP+K+VI WS MIA + Q +L+ +A+  F  M+Q  +  ++ T+VSVL A
Sbjct: 193 IGEAFAVFTRMPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRITYVSVLDA 252

Query: 353 CATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTW 412
             ++  L+LG  +H  +V  GL + + V N L+++Y KCG  +++ ++F    ++N V+W
Sbjct: 253 YTSVGALELGKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSW 312

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
           N M+  Y Q G   +A+ +F  M  E V   ++T+ ++L  C+     +  +  H + ++
Sbjct: 313 NAMLAAYGQNGRSREALALFDSMDLEGVRPNDITFVTILYCCSHSGKFKDAVS-HFVEMR 371

Query: 473 ANYDMDV--VVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
            ++ +    V    LIDM  + G + +A  L+  M    + V W +++     H
Sbjct: 372 QDFGITPREVHFGCLIDMLGRSGKLEEAEELIQAMPVPADAVLWTSLLCACVTH 425



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 159/347 (45%), Gaps = 18/347 (5%)

Query: 92  FATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHRE 151
           F +N+L+++Y K   L +A ++FD M  +N  S+   + G+  S + VEA+ LF  + +E
Sbjct: 77  FLSNLLVDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQE 136

Query: 152 GHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFA 211
           G   +  A   F+    +         + +     G DS+     A+I+ +  CG +  A
Sbjct: 137 GELPDRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINMYGKCGSIGEA 196

Query: 212 RKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGL 255
             VF  +                 N+  +EAL FF  M+  G + +  T+  VL A   +
Sbjct: 197 FAVFTRMPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRITYVSVLDAYTSV 256

Query: 256 DTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMI 315
             + + K+ H   +    +  + V   L+++Y K G   +AR +F+ M +K+V+ W+ M+
Sbjct: 257 GALELGKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAML 316

Query: 316 ARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA-TMEGLDLGNQIHSLVVRVGL 374
           A Y Q   S +A+ LF  M    V PN  TFV++L  C+ + +  D  +    +    G+
Sbjct: 317 AAYGQNGRSREALALFDSMDLEGVRPNDITFVTILYCCSHSGKFKDAVSHFVEMRQDFGI 376

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMIVGYV 420
                    L+D+  + G++E + EL    P   + V W +++   V
Sbjct: 377 TPREVHFGCLIDMLGRSGKLEEAEELIQAMPVPADAVLWTSLLCACV 423



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 22/273 (8%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           + SC     L     IH      G   DL   N ++N+Y K   + +A  +F  MPE+N 
Sbjct: 149 IDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNV 208

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           IS+ T I  +  +    EA+  F  + +EG EL+   + + L    S+G  EL   +   
Sbjct: 209 ISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVR 268

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEA 226
           +   G D++  VG  L++ +  CG  + AR VFD +                 N    EA
Sbjct: 269 IVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREA 328

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM---DLYVAVAL 283
           L  F  M   G +PN+ TF  +L  C      + A S H   ++  + +   +++    L
Sbjct: 329 LALFDSMDLEGVRPNDITFVTILYCCSHSGKFKDAVS-HFVEMRQDFGITPREVHFG-CL 386

Query: 284 LDLYTKSGEISNARRIFEEMP-KKDVIPWSFMI 315
           +D+  +SG++  A  + + MP   D + W+ ++
Sbjct: 387 IDMLGRSGKLEEAEELIQAMPVPADAVLWTSLL 419



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 51/112 (45%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E +  +Y + L +      L+    +H +++  G    +   N L+N+Y K     DA  
Sbjct: 240 ELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARD 299

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFL 164
           +FD M E+N +S+   +  Y  + +  EA+ LF ++  EG   N   F   L
Sbjct: 300 VFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPNDITFVTIL 351


>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 703

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 243/646 (37%), Positives = 365/646 (56%), Gaps = 29/646 (4%)

Query: 189 DSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFE----------------EALNFFSQ 232
           DS+     +LI+ +S CG  + ARK+FD +                      E L  F  
Sbjct: 58  DSDITQINSLINLYSKCGQSKCARKLFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRN 117

Query: 233 MRAVGFK-PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
           + ++    PN + F  VL  C     ++  K  HG  LK+   +  YV  AL+ +Y++  
Sbjct: 118 LVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCF 177

Query: 292 EISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQ 351
            + +A +I + +P  DV  ++ +++   ++    +A ++  RM    V  +  T+VSVL 
Sbjct: 178 HVDSAMQILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLG 237

Query: 352 ACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
            CA +  L LG QIH+ +++ GL+ DVFVS+ L+D Y KCG + N+ + F     RN V 
Sbjct: 238 LCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVA 297

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
           W  ++  Y+Q G   + + +F+KM  E     E T++ +L ACASL AL  G  +H   V
Sbjct: 298 WTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIV 357

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
            + +   ++V NALI+MY+K G+I  +  VF  M + + ++WNAMI GYS HGL  + L 
Sbjct: 358 MSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALL 417

Query: 532 VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLL 591
           VF  M   G  PN +TF+GVLSAC +  L+++G  YF  ++  + +EP +EHYT MV+LL
Sbjct: 418 VFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALL 477

Query: 592 GRAGHLDKAAKLIEGIP-FQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATH 650
           GRAG LD+A   ++     +  V+ WR LL AC IH N  +G+   + ++  +P D  T+
Sbjct: 478 GRAGLLDEAENFMKTTTQVKWDVVAWRTLLNACHIHRNYNLGKQITETVIQMDPHDVGTY 537

Query: 651 VLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIR 699
            LLSN++A AR W           E+   KEPG SW++ +   H F +  ++H +   I 
Sbjct: 538 TLLSNMHAKARKWDGVVKIRKLMKERNIKKEPGASWLDIRNNTHVFVSEGSNHPESTQIF 597

Query: 700 GMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRII 759
             ++ L    +  GY PD+  VL DV +++KE YL  HSEKLALA+ L K+PP  PIRII
Sbjct: 598 EKVQQLLAMIKPLGYAPDVGVVLHDVEDEQKEGYLSHHSEKLALAYGLMKIPPPGPIRII 657

Query: 760 KNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           KNLR+C DCH A+K+ISK   R II+RD +RFHHF++G C+C D W
Sbjct: 658 KNLRMCDDCHIAVKLISKATNRLIIVRDANRFHHFREGLCTCNDHW 703



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 224/476 (47%), Gaps = 25/476 (5%)

Query: 72  LQTAMTIHCQVLKKGNCL---DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTT 128
           L+   TIH Q++ +       D+   N L+N+Y K  +   A KLFD M +RN +S+   
Sbjct: 39  LRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDRMLQRNVVSWSAL 98

Query: 129 IQGYTVSSQFVEAVGLFSTL-HREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLG 187
           + GY    + +E +GLF  L   +    N + FT  L      G  +        + K G
Sbjct: 99  MMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSG 158

Query: 188 HDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND----------------CFEEALNFFS 231
              + +V  ALI  +S C  V+ A ++ D +  D                C  EA     
Sbjct: 159 LLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVESGCRGEAAQVLK 218

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
           +M       ++ T+  VL  C  +  +++    H   LKT    D++V+  L+D Y K G
Sbjct: 219 RMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCG 278

Query: 292 EISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQ 351
           E+ NAR+ F+ +  ++V+ W+ ++  Y Q     + + LF +M      PN+FTF  +L 
Sbjct: 279 EVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLN 338

Query: 352 ACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
           ACA++  L  G+ +H  +V  G  + + V NAL+++Y+K G +++S  +F+    R+ +T
Sbjct: 339 ACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVIT 398

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
           WN MI GY   G   +A+++F  M+        VT+  VL AC  LA ++ G       +
Sbjct: 399 WNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIM 458

Query: 472 KANYDMDVVVAN--ALIDMYAKCGSITDARLVFDMMND--WNEVSWNAMISGYSMH 523
           K  +D++  + +   ++ +  + G + +A           W+ V+W  +++   +H
Sbjct: 459 K-KFDVEPGLEHYTCMVALLGRAGLLDEAENFMKTTTQVKWDVVAWRTLLNACHIH 513



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 99/406 (24%), Positives = 168/406 (41%), Gaps = 66/406 (16%)

Query: 29  SAQAALSTQQCSNSTTTPITFSVSE---FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKK 85
           S  +AL    C       +   V E   ++S +Y + L  C Q  DLQ  + IH Q+LK 
Sbjct: 199 SILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKT 258

Query: 86  GNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLF 145
           G   D+F ++ L++ Y K   + +A K FD + +RN +++   +  Y  +  F E + LF
Sbjct: 259 GLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLF 318

Query: 146 STLHREGHELNPFAFTAFLKV---LVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAF 202
           + +  E    N F F   L     LV++ + +L   +   +   G  ++  VG ALI+ +
Sbjct: 319 TKMELEDTRPNEFTFAVLLNACASLVALAYGDL---LHGRIVMSGFKNHLIVGNALINMY 375

Query: 203 SVCGCVEFARKVFDGLFN----------------DCFEEALNFFSQMRAVGFKPNNFTFA 246
           S  G ++ +  VF  + N                   ++AL  F  M + G  PN  TF 
Sbjct: 376 SKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFI 435

Query: 247 FVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK 306
            VL AC+ L  ++          +  Y  D                        + M K 
Sbjct: 436 GVLSACVHLALVQ----------EGFYYFD------------------------QIMKKF 461

Query: 307 DVIP----WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG 362
           DV P    ++ M+A   +  L +D  E F +     V  +   + ++L AC      +LG
Sbjct: 462 DVEPGLEHYTCMVALLGRAGL-LDEAENFMKTTTQ-VKWDVVAWRTLLNACHIHRNYNLG 519

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRN 408
            QI   V+++    DV     L +++AK  + +  V++     +RN
Sbjct: 520 KQITETVIQMD-PHDVGTYTLLSNMHAKARKWDGVVKIRKLMKERN 564


>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 820

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 254/698 (36%), Positives = 383/698 (54%), Gaps = 40/698 (5%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKG----NCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           L+ C +   ++ A  +H  VLK      + + LF  N   +VY K +    A  +FDEMP
Sbjct: 125 LRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLF--NHAAHVYSKCSEFRAACGVFDEMP 182

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
           +RN  S+   I G T    F +    F  +   G   + FA++A ++  + +   EL   
Sbjct: 183 QRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKM 242

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-----------GLFNDCFE--- 224
           V A +   G  ++ FV T+L++ ++  G +E +  VF+            + + C     
Sbjct: 243 VHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGL 302

Query: 225 --EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
             EA + F +M+     PN +T   V KA   L  + + K    CA +   E ++ V  A
Sbjct: 303 HLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTA 362

Query: 283 LLDLYTKSGEISNARRIFEE--MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
           L+D+Y+K G + +AR +F+   +      PW+ MI+ Y+Q+  S +A+EL+ +M Q  + 
Sbjct: 363 LIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGIT 422

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL-LSDVFVSNALMDVYAKCGRMENSVE 399
            + +T+ SV  A A  + L  G  +H +V++ GL L  V V+NA+ D Y+KCG +E+  +
Sbjct: 423 SDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRK 482

Query: 400 LFAESPKRNHVTWNTMIVGYVQ--LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
           +F    +R+ V+W T++  Y Q  LGE  +A+  F  M EE     + T+SSVL +CASL
Sbjct: 483 VFDRMEERDIVSWTTLVTAYSQSSLGE--EALATFCLMREEGFAPNQFTFSSVLISCASL 540

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
             LE G QVH L  KA  D +  + +ALIDMYAKCGSIT+A  VFD +++ + VSW A+I
Sbjct: 541 CFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAII 600

Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
           SGY+ HGL  + L++F  M+  G + N +T + VL ACS+GG++E+G  YF+ M   YG+
Sbjct: 601 SGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGV 660

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQ 637
            P +EHY  ++ LLGR G LD A + I  +P +P+ M+W+ LLG C +H NVE+G ++A+
Sbjct: 661 VPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAAR 720

Query: 638 HILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFR 686
            IL   PE  AT+VLLSN Y    S+E   S           KEPG SWI  +G VH F 
Sbjct: 721 KILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFY 780

Query: 687 AGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRD 724
           +GD  H     I   LE L  K +  GY+PDL  VL +
Sbjct: 781 SGDQQHPQKKEIYVKLEELREKIKAMGYVPDLRYVLNN 818



 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 148/492 (30%), Positives = 253/492 (51%), Gaps = 23/492 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +  +Y+  +QSCI  D L+    +H Q++ +G    +F +  LLN+Y KL  + D+  +F
Sbjct: 220 DKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVF 279

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           + M E N +S+   I G T +   +EA  LF  +       N +   +  K +  +    
Sbjct: 280 NMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVN 339

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
           +   V  C  +LG + N  VGTALID +S CG +  AR VFD  F               
Sbjct: 340 MGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISG 399

Query: 220 ---NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE-M 275
              + C +EAL  + QM   G   + +T+  V  A     +++  +  HG  LK   + M
Sbjct: 400 YSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLM 459

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
            + V  A+ D Y+K G + + R++F+ M ++D++ W+ ++  Y+Q+ L  +A+  FC MR
Sbjct: 460 VVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMR 519

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
           +   APNQFTF SVL +CA++  L+ G Q+H L+ + GL ++  + +AL+D+YAKCG + 
Sbjct: 520 EEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSIT 579

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
            + ++F +    + V+W  +I GY Q G V  A+ +F +M    + A  VT   VL AC+
Sbjct: 580 EAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACS 639

Query: 456 SLAALEPGMQVHCLTVKANYDM--DVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVS 512
               +E G+  +   ++  Y +  ++     +ID+  + G + DA   +  M  + NE+ 
Sbjct: 640 HGGMVEEGL-FYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMV 698

Query: 513 WNAMISGYSMHG 524
           W  ++ G  +HG
Sbjct: 699 WQTLLGGCRVHG 710



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 158/378 (41%), Gaps = 53/378 (14%)

Query: 22  NAWLRGLS----AQAALS--TQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTA 75
           NA + G S    +Q AL    Q C N  T+ +    S FN+ + + S         LQ  
Sbjct: 394 NAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKS---------LQFG 444

Query: 76  MTIHCQVLKKGNCLDLF---ATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGY 132
             +H  VLK G  LDL      N + + Y K   L D  K+FD M ER+ +S+ T +  Y
Sbjct: 445 RVVHGMVLKCG--LDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAY 502

Query: 133 TVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNA 192
           + SS   EA+  F  +  EG   N F F++ L    S+ + E    V   + K G D+  
Sbjct: 503 SQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEK 562

Query: 193 FVGTALIDAFSVCGCVEFARKVFDGLFN----------------DCFEEALNFFSQMRAV 236
            + +ALID ++ CG +  A KVFD + N                   E+AL  F +M   
Sbjct: 563 CIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELS 622

Query: 237 GFKPNNFTFAFVLKACL-------GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK 289
           G K N  T   VL AC        GL   +  +  +G       EM+ Y  +  +DL  +
Sbjct: 623 GIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVP----EMEHYACI--IDLLGR 676

Query: 290 SGEISNARRIFEEMP-KKDVIPWSFMIAR---YAQTDLSIDAVELFCRMRQAFVAPNQFT 345
            G + +A     +MP + + + W  ++     +   +L   A      +R  + A     
Sbjct: 677 VGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLL 736

Query: 346 FVSVLQACATMEGLDLGN 363
             + ++  +  +GL L N
Sbjct: 737 SNTYIETGSYEDGLSLRN 754



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 80/176 (45%), Gaps = 4/176 (2%)

Query: 450 VLRACASLAALEPGMQVHCLTVKANY-DMDVVVA-NALIDMYAKCGSITDARLVFDMMND 507
           VLR CA   ++     VH L +K+N+ D D++V  N    +Y+KC     A  VFD M  
Sbjct: 124 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 183

Query: 508 WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAY 567
            N  SW  MI G + HGL  +  K F  M   G  P+   +  ++ +C     LE G+  
Sbjct: 184 RNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMV 243

Query: 568 FKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGAC 623
              +V   G    I   TS++++  + G ++ +  +   +     V  W A++  C
Sbjct: 244 HAQIVMR-GFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVS-WNAMISGC 297


>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 642

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 240/643 (37%), Positives = 350/643 (54%), Gaps = 71/643 (11%)

Query: 233 MRAVGFKPNNFTFAFVLKACLGLD-------TIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           M +  + PN  TF F  +  L L        T R  K  H   +KT    D   A  ++ 
Sbjct: 1   MNSTIYNPNR-TFNFSPQPPLILSKPFTSCKTPRDLKQLHAIFIKTGQIQDPLTAAEVIK 59

Query: 286 LYT-KSGEISNARRIFEEMPKKDVIPWSFMIARYAQTD---LSIDAVELFCRMR-QAFVA 340
                S +I  AR +F +MP+ +   W+ ++   A+T+   L  +A+ LF  M     V 
Sbjct: 60  FCAFSSRDIDYARAVFRQMPEPNCFCWNTILRVLAETNDEHLQSEALMLFSAMLCDGRVK 119

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           PN+FTF SVL+ACA    L  G QIH L+V+ G   D FV + L+ +Y  C  ME++  L
Sbjct: 120 PNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSL 179

Query: 401 FA-----------------------------------------------ESPKRNHVTWN 413
           F                                                E P+R+ V+WN
Sbjct: 180 FCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWN 239

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
            MI GY Q G   +A+ +F +M    +    VT  SVL A A + ALE G  +H    K 
Sbjct: 240 VMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKN 299

Query: 474 NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVF 533
             ++D V+ +AL+DMY+KCGSI +A  VF+ +   N ++W+A+I  ++MHG + + +  F
Sbjct: 300 KIEIDDVLGSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHF 359

Query: 534 DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGR 593
            LM + G  PN++ ++G+LSACS+ GL+E+G ++F  MV   G++P IEHY  MV LLGR
Sbjct: 360 HLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGR 419

Query: 594 AGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLL 653
           AGHL++A +LI  +P +P  +IW+ALLGAC +H N+++G   A+ +++  P D  ++V L
Sbjct: 420 AGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVAL 479

Query: 654 SNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGML 702
           SN+YA   +WE  A            K+PG SWIE  G++H F   D SH+    I+ ML
Sbjct: 480 SNLYASLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAML 539

Query: 703 EWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNL 762
             ++MK R  GY P+   V  +  E E+ R L  HSEK+A+AF L    P  P++I+KNL
Sbjct: 540 GEMSMKLRSNGYRPNTLEVFLNTDEQERARALQYHSEKIAVAFGLISTAPQHPLKIVKNL 599

Query: 763 RICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           RIC DCH ++K+IS I +R+II+RD  RFH F+ G CSC D+W
Sbjct: 600 RICEDCHASLKLISLIYKRQIIVRDRKRFHQFEHGSCSCMDYW 642



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 104/429 (24%), Positives = 185/429 (43%), Gaps = 43/429 (10%)

Query: 71  DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNR---LPDATKLFDEM-----PERNT 122
           D+  A  +  Q + + NC   F  N +L V  + N      +A  LF  M      + N 
Sbjct: 67  DIDYARAVFRQ-MPEPNC---FCWNTILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNR 122

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVF-- 180
            +F + ++    +S+  E   +   + + G   + F  +  +++ V     E    +F  
Sbjct: 123 FTFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCK 182

Query: 181 -------ACVYKLG---HDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------- 219
                  +C  +L     D N  +   +ID     G ++ A+ +FD +            
Sbjct: 183 NVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMI 242

Query: 220 -----NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
                N  F EA+N F +M++    PN  T   VL A   +  + + K  H  A K   E
Sbjct: 243 SGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIE 302

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
           +D  +  AL+D+Y+K G I  A ++FE +PK++ I WS +I  +A    + DA+  F  M
Sbjct: 303 IDDVLGSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLM 362

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR-VGLLSDVFVSNALMDVYAKCGR 393
            +A V PN   ++ +L AC+    ++ G    S +V+ VGL   +     ++D+  + G 
Sbjct: 363 GKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGH 422

Query: 394 MENSVELFAESP-KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLR 452
           +E + EL    P + + V W  ++ G  ++ +  K     ++ L E  P    +Y ++  
Sbjct: 423 LEEAEELIRNMPIEPDDVIWKALL-GACKMHKNLKMGERVAETLMELAPHDSGSYVALSN 481

Query: 453 ACASLAALE 461
             ASL   E
Sbjct: 482 LYASLGNWE 490


>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Vitis vinifera]
          Length = 628

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 225/561 (40%), Positives = 315/561 (56%), Gaps = 46/561 (8%)

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y   G +  +  +F       V  W+ +I  +A   L   A+  + +M    V PN FTF
Sbjct: 72  YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 131

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
            S+L+ C     ++ G  +HS  V++G  SD++V   L+DVYA+ G + ++ +LF   P+
Sbjct: 132 SSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE 187

Query: 407 -------------------------------RNHVTWNTMIVGYVQLGEVGKAMIMFSKM 435
                                          R+ V WN MI GY Q G   +A+++F +M
Sbjct: 188 KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM 247

Query: 436 LEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSI 495
           L+ +    EVT  SVL AC  L ALE G  VH          +V V  AL+DMY+KCGS+
Sbjct: 248 LKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSL 307

Query: 496 TDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSAC 555
            DARLVFD ++D + V+WN+MI GY+MHG S E L++F  M + G  P N+TF+G+LSAC
Sbjct: 308 EDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSAC 367

Query: 556 SNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMI 615
            + G + +G   F  M   YGIEP IEHY  MV+LLGRAGH+++A +L++ +  +P  ++
Sbjct: 368 GHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVL 427

Query: 616 WRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-------- 667
           W  LLGAC +H  + +G    + ++D    +  T++LLSNIYA   +W+  A        
Sbjct: 428 WGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKD 487

Query: 668 ---SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRD 724
               KEPG S IE    VH F AG  +H     I  MLE +N   +  GY P    VL D
Sbjct: 488 SGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHD 547

Query: 725 VREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREII 784
           + E EKER L VHSEKLA+AF L    P + I+I+KNLR+C DCH   K+ISKI  R+I+
Sbjct: 548 IGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIV 607

Query: 785 IRDVHRFHHFQDGCCSCGDFW 805
           +RD +RFHHF +G CSCGD+W
Sbjct: 608 VRDRNRFHHFVNGSCSCGDYW 628



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 123/472 (26%), Positives = 222/472 (47%), Gaps = 66/472 (13%)

Query: 144 LFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFS 203
           + + L R G + +P       +   S+G  +    +F        + + F  TA+I   +
Sbjct: 49  IHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRT----QNPSVFFWTAIIHGHA 104

Query: 204 VCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKS 263
           + G                 E+ALNF++QM   G +PN FTF+ +LK C     I   K+
Sbjct: 105 LRGL---------------HEQALNFYAQMLTQGVEPNAFTFSSILKLC----PIEPGKA 145

Query: 264 AHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK----------------- 306
            H  A+K  ++ DLYV   LLD+Y + G++ +A+++F+ MP+K                 
Sbjct: 146 LHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGE 205

Query: 307 --------------DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
                         D + W+ MI  Y Q  +  +A+ LF RM +A   PN+ T +SVL A
Sbjct: 206 LDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSA 265

Query: 353 CATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTW 412
           C  +  L+ G  +HS +   G+  +V V  AL+D+Y+KCG +E++  +F +   ++ V W
Sbjct: 266 CGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAW 325

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
           N+MIVGY   G   +A+ +F  M    +  T +T+  +L AC     +  G  +    +K
Sbjct: 326 NSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFN-KMK 384

Query: 473 ANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHGLSAEV 529
             Y ++  + +   ++++  + G +  A  LV +M  + + V W  ++    +HG  A  
Sbjct: 385 DEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALG 444

Query: 530 LKVFDLMQQRGWRPNNLTFV---GVLSACSNGGLLEQGEAYFKSMVANYGIE 578
            K+ +L+  +    N+ T++    + +A  N      G A  ++M+ + G++
Sbjct: 445 EKIVELLVDQNL-ANSGTYILLSNIYAAVGN----WDGVARLRTMMKDSGVK 491



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 140/294 (47%), Gaps = 37/294 (12%)

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
           QIH+++ R GL     ++  L   YA  GR++ SV LF  +   +   W  +I G+   G
Sbjct: 48  QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRG 107

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN 483
              +A+  +++ML + V     T+SS+L+ C     +EPG  +H   VK  +D D+ V  
Sbjct: 108 LHEQALNFYAQMLTQGVEPNAFTFSSILKLC----PIEPGKALHSQAVKLGFDSDLYVRT 163

Query: 484 ALIDMYAKCGSITD-------------------------------ARLVFDMMNDWNEVS 512
            L+D+YA+ G +                                 AR++FD M + + V 
Sbjct: 164 GLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVC 223

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
           WN MI GY+ +G+  E L +F  M +   +PN +T + VLSAC   G LE G  +  S +
Sbjct: 224 WNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGR-WVHSYI 282

Query: 573 ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH 626
            N GI+  +   T++V +  + G L+ A  + + I     V+ W +++    +H
Sbjct: 283 ENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKID-DKDVVAWNSMIVGYAMH 335



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 83/347 (23%), Positives = 132/347 (38%), Gaps = 73/347 (21%)

Query: 25  LRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLK 84
           LRGL  QA     Q       P        N+ ++++ L+ C     ++    +H Q +K
Sbjct: 105 LRGLHEQALNFYAQMLTQGVEP--------NAFTFSSILKLC----PIEPGKALHSQAVK 152

Query: 85  KGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFV------------------ 126
            G   DL+    LL+VY +   +  A +LFD MPE++ +S                    
Sbjct: 153 LGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVL 212

Query: 127 -------------TTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
                          I GYT +    EA+ LF  + +   + N     + L     +G  
Sbjct: 213 FDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGAL 272

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL--------------- 218
           E    V + +   G   N  VGTAL+D +S CG +E AR VFD +               
Sbjct: 273 ESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGY 332

Query: 219 -FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKAC-------LGLDTIRVAKSAHGCALK 270
             +   +EAL  F  M  +G  P N TF  +L AC        G D     K  +G   K
Sbjct: 333 AMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPK 392

Query: 271 TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
             +         +++L  ++G +  A  + + M  + D + W  ++ 
Sbjct: 393 IEH------YGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLG 433



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 76/171 (44%), Gaps = 6/171 (3%)

Query: 464 MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMH 523
           +Q+H +  +   D   ++   L   YA  G +  +  +F    + +   W A+I G+++ 
Sbjct: 47  LQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALR 106

Query: 524 GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEH 583
           GL  + L  +  M  +G  PN  TF  +L  C     +E G+A   S     G +  +  
Sbjct: 107 GLHEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPGKA-LHSQAVKLGFDSDLYV 161

Query: 584 YTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL 634
            T ++ +  R G +  A +L + +P + S++   A+L     H  ++  R+
Sbjct: 162 RTGLLDVYARGGDVVSAQQLFDTMP-EKSLVSLTAMLTCYAKHGELDAARV 211


>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
          Length = 770

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 245/704 (34%), Positives = 366/704 (51%), Gaps = 41/704 (5%)

Query: 142 VGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDA 201
           VG    + REG  +    +   L V V  G       +   + K G  ++ FV T+L++A
Sbjct: 63  VGEAMAMLREGKTVQSAMYVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNA 122

Query: 202 FSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTF 245
           +  CG  + AR +FD +                 N    EAL  F +M   G  P+++T 
Sbjct: 123 YMRCGASQDARSLFDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTL 182

Query: 246 AFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPK 305
             +L AC   +   +    HG  +K        +  +L  +Y KSG + +A R F  +P 
Sbjct: 183 GAMLNACSASNNADLGSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPD 242

Query: 306 KDVIPWSFMIARYAQTDLSID-AVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
           K+VI W+ MI+  A+ +   +  + LF  M    V PN+FT  SV+  C T   L+LG Q
Sbjct: 243 KNVITWTTMISACAEDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQ 302

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
           + +   ++G  +++ V N+ M +Y + G  + ++  F E    + +TWN MI GY Q+ E
Sbjct: 303 VQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIME 362

Query: 425 VGK-----------AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
             K           A+ +F  +    +     T+SS+L  C+S+ ALE G Q+H  T+K 
Sbjct: 363 TAKDDLHARSRGFQALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKT 422

Query: 474 NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVF 533
            +  DVVV +AL++MY KCG I DA   F  M+    V+W +MISGYS HG   E +++F
Sbjct: 423 GFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLF 482

Query: 534 DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGR 593
           + M+  G RPN +TFV VLSACS  GL E+ E YF  M   Y IEP ++HY  MV +  R
Sbjct: 483 EDMRFAGVRPNEITFVCVLSACSYAGLAEKAEHYFDMMKEEYKIEPIVDHYGCMVDMFVR 542

Query: 594 AGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLL 653
            G LD A   I    F+P+  IW +L+  C  H N+E+   +A  +++  P+   T+VLL
Sbjct: 543 LGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLIELRPKGIETYVLL 602

Query: 654 SNIYAMARSWEKAAS-----KEPGL------SWIENQGMVHYFRAGDTSHADMNIIRGML 702
            N+Y     W   A      K+ GL      SWI  +  V++F+A D +H   + +  +L
Sbjct: 603 LNMYISNERWHDVARVRKLMKQEGLGVLMDRSWITIKDKVYFFKANDKTHELSDELYQLL 662

Query: 703 EWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWV--HSEKLALAFALFKMPPSSPIRIIK 760
           E L  K++  GY P  SA L D  +D+K     V  HSE+LA+A  L + PP + +R+ K
Sbjct: 663 ENLLEKAKTIGYEPYQSAELSDSEDDKKPPAGSVRHHSERLAVALGLLQTPPGATVRVTK 722

Query: 761 NLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
           N+ +C DCH++IK  S +  REI++RD  R H F+DG CSCGDF
Sbjct: 723 NITMCRDCHSSIKFFSLLANREIVVRDSKRLHKFKDGRCSCGDF 766



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 148/501 (29%), Positives = 242/501 (48%), Gaps = 32/501 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
            S  Y   L  C++   L  A  +H  ++K G   D+F    L+N Y++     DA  LF
Sbjct: 77  QSAMYVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLF 136

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D+MPE+N +++   I GYTV+SQ +EA+ +F  +   G   + +   A L    +   A+
Sbjct: 137 DQMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNAD 196

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF-----------DGLFNDCF 223
           L   V     K    S   +G +L   ++  G +E A + F             + + C 
Sbjct: 197 LGSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACA 256

Query: 224 EE------ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
           E+       L  F  M   G  PN FT   V+  C     + + K       K   + ++
Sbjct: 257 EDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNI 316

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQT------DL-----SID 326
            V  + + LY + GE   A R FEEM    +I W+ MI+ YAQ       DL        
Sbjct: 317 PVKNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQ 376

Query: 327 AVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMD 386
           A+++F  ++++ + P+ FTF S+L  C++M  L+ G QIH+  ++ G LSDV V++AL++
Sbjct: 377 ALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVN 436

Query: 387 VYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVT 446
           +Y KCG +E++ + F E   R  VTW +MI GY Q G   +A+ +F  M    V   E+T
Sbjct: 437 MYNKCGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEIT 496

Query: 447 YSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFD 503
           +  VL AC S A L    + +   +K  Y ++ +V +   ++DM+ + G + DA   +  
Sbjct: 497 FVCVLSAC-SYAGLAEKAEHYFDMMKEEYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRR 555

Query: 504 MMNDWNEVSWNAMISGYSMHG 524
              + NE  W+++++G   HG
Sbjct: 556 TGFEPNEAIWSSLVAGCRSHG 576


>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
 gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 216/577 (37%), Positives = 334/577 (57%), Gaps = 11/577 (1%)

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           PN +  A  + +C     +   +  HG  LKT +    YV  AL+ +Y+K   + +A  +
Sbjct: 131 PNEYILAIAISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGV 190

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL 359
           + E+P  D++ ++ +++   +     + +E+   M    V  ++ TFV+    CA+++ L
Sbjct: 191 WNEVPVNDIVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDL 250

Query: 360 DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGY 419
            LG  +H  ++   +  D +VS+A++++Y KCG+   +  +F     RN V W  ++   
Sbjct: 251 RLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASC 310

Query: 420 VQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDV 479
            Q G   +A+ +FSKM +E V + E TY+ +L ACA L+A   G  +H  + K+ +   V
Sbjct: 311 FQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHV 370

Query: 480 VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
           +V NALI+MYAK G I  A+ VF  M   + ++WNAMI G+S HGL  + L VF  M   
Sbjct: 371 MVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAA 430

Query: 540 GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDK 599
              PN +TF GVLSAC + GL+++G  Y   ++  +G++P +EHYT +VSLL + G L++
Sbjct: 431 EEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNE 490

Query: 600 AAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAM 659
           A   +   P +  V+ WR LL AC +H N  +GR  A+ +L+ +P D  T+ LLSNIYA 
Sbjct: 491 ARNFMRTAPVKWDVVAWRTLLNACHVHQNYGLGRWVAEFVLEMDPNDVGTYTLLSNIYAK 550

Query: 660 ARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMK 708
            + W           +K   KEPG+SWIE   + H F + D  H D       ++ L   
Sbjct: 551 EKRWDGVVKVRKLMRDKKIKKEPGVSWIEIGNVTHIFTSEDNKHPDYGQTYQKVKELLAM 610

Query: 709 SRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDC 768
            +  GY PD+ AVL DV +++KE YL  HSEKLA+A+ L K+P  + I +IKNLRIC DC
Sbjct: 611 IKPLGYTPDIGAVLHDVEDEQKEYYLSYHSEKLAIAYGLLKLPSEASILVIKNLRICDDC 670

Query: 769 HTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           H+A+++ISK+  R I++RD +RFHHF+DG CSC D+W
Sbjct: 671 HSAVRLISKVTNRVIVVRDANRFHHFRDGRCSCLDYW 707



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/474 (26%), Positives = 221/474 (46%), Gaps = 21/474 (4%)

Query: 71  DLQTAMTIHCQVLKKGNCLD--LFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTT 128
           +L+   TIH  ++      +  +   N L+N Y K+N++  A  LFD MPERN +S+   
Sbjct: 44  NLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMPERNVVSWSAL 103

Query: 129 IQGYTVSSQFVEAVGLFSTLHREGH-ELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLG 187
           + GY ++   ++ + L   +  EG+   N +     +      G  E        + K G
Sbjct: 104 MTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTG 163

Query: 188 HDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFS 231
              + +V  AL+  +S C  V+ A  V++ +                 N    E L    
Sbjct: 164 FSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLREGLEVLR 223

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
            M +   K +  TF      C  L  +R+    HG  L +  E D YV+ A++++Y K G
Sbjct: 224 SMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCG 283

Query: 292 EISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQ 351
           +   AR +F+ +  ++V+ W+ ++A   Q     +A+ LF +M Q  V  N+FT+  +L 
Sbjct: 284 KSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLN 343

Query: 352 ACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
           ACA +     G+ +H    + G    V V NAL+++YAK G +E + ++F++   R+ +T
Sbjct: 344 ACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIIT 403

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM-QVHCLT 470
           WN MI G+   G   KA+++F  ML  +     VT++ VL AC  L  ++ G   +H L 
Sbjct: 404 WNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLM 463

Query: 471 VKANYDMDVVVANALIDMYAKCGSITDAR-LVFDMMNDWNEVSWNAMISGYSMH 523
            +      +     ++ + +K G + +AR  +      W+ V+W  +++   +H
Sbjct: 464 KQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNACHVH 517



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 94/380 (24%), Positives = 193/380 (50%), Gaps = 13/380 (3%)

Query: 248 VLKACLGLDTIRVAKSAHGCALKT--CYEMDLYVAVALLDLYTKSGEISNARRIFEEMPK 305
           +LK       ++V K+ H   + T    E  +    +L++ Y K  ++S A  +F+ MP+
Sbjct: 35  LLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMPE 94

Query: 306 KDVIPWSFMIARYAQTDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
           ++V+ WS ++  Y     S+  + L   M  +  V+PN++     + +C     ++ G Q
Sbjct: 95  RNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQ 154

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
            H L+++ G     +V NAL+ +Y+KC  +++++ ++ E P  + V +N+++   V+ G 
Sbjct: 155 CHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGY 214

Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA 484
           + + + +   M+ E V   +VT+ +    CASL  L  G+ VH   + ++ + D  V++A
Sbjct: 215 LREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSA 274

Query: 485 LIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPN 544
           +I+MY KCG    AR VFD +   N V W A+++    +G   E L +F  M+Q   + N
Sbjct: 275 IINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSN 334

Query: 545 NLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY----TSMVSLLGRAGHLDKA 600
             T+  +L+AC+       G     S++  +  +   +H+     +++++  ++G ++ A
Sbjct: 335 EFTYAVLLNACAGLSARRNG-----SLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAA 389

Query: 601 AKLIEGIPFQPSVMIWRALL 620
            K+   +     ++ W A++
Sbjct: 390 KKVFSDM-MHRDIITWNAMI 408



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 116/276 (42%), Gaps = 18/276 (6%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           ++  +   C    DL+  + +H ++L      D + ++ ++N+Y K  +   A  +FD +
Sbjct: 236 TFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGL 295

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
             RN + +   +     +  F EA+ LFS + +E  + N F +   L     +       
Sbjct: 296 QSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGS 355

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF-DGLFNDCF------------- 223
            +     K G   +  VG ALI+ ++  G +E A+KVF D +  D               
Sbjct: 356 LLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHG 415

Query: 224 --EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVA-KSAHGCALKTCYEMDLYVA 280
             ++AL  F  M A    PN  TF  VL AC  L  ++      H    +   +  L   
Sbjct: 416 LGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHY 475

Query: 281 VALLDLYTKSGEISNARRIFEEMPKK-DVIPWSFMI 315
             ++ L +K+G+++ AR      P K DV+ W  ++
Sbjct: 476 TCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLL 511



 Score = 39.3 bits (90), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 28/117 (23%), Positives = 48/117 (41%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +YA  L +C      +    +H    K G    +   N L+N+Y K   +  A K+F
Sbjct: 334 NEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVF 393

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
            +M  R+ I++   I G++      +A+ +F  +       N   FT  L     +G
Sbjct: 394 SDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLG 450


>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
          Length = 1740

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 244/649 (37%), Positives = 353/649 (54%), Gaps = 62/649 (9%)

Query: 186  LGHD--SNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEAL 227
            + HD  SN  +G  L+ A++VCG     R +FD +                 N  + +AL
Sbjct: 1052 IDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDAL 1111

Query: 228  NFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLY 287
              F  M   G  P+++T+  VLKA  G + + V    H   ++   +++++V   L+ +Y
Sbjct: 1112 LVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMY 1171

Query: 288  TKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFV 347
             K G +  A R+ +ZMP +DV+ W+ ++A  A+     DA+E+   M    + P+  T  
Sbjct: 1172 GKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMA 1231

Query: 348  SVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKR 407
            S+L A                           V+N  +D       +    E+F +   +
Sbjct: 1232 SLLPA---------------------------VTNTCLD------NVSFVKEMFMKLANK 1258

Query: 408  NHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVH 467
            + V+WN MI  Y+      +A+ +F +M +  V    ++ +SVL AC  L+AL  G ++H
Sbjct: 1259 SLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIH 1318

Query: 468  CLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSA 527
               V+     ++++ NALIDMYAKCG +  AR VFD M   + VSW +MIS Y M+G   
Sbjct: 1319 EYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGR 1378

Query: 528  EVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSM 587
            + + +F  MQ  G  P+++ FV VLSACS+ GLL++G  YFK M     I P IEH+  M
Sbjct: 1379 DAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCM 1438

Query: 588  VSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDE 647
            V LLGRAG +D+A   I+ +P +P+  +W ALL AC +++N+ IG L+A  +    PE  
Sbjct: 1439 VDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQS 1498

Query: 648  ATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMN 696
              +VLLSNIYA A  WE           K   K PG+S  E    VH F AGD SH    
Sbjct: 1499 GYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSK 1558

Query: 697  IIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPI 756
             I   L+ L  K ++AGY+P+  + L DV E++KE +L VHSEKLA+AFA+    P SPI
Sbjct: 1559 QIYEELDVLVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPI 1618

Query: 757  RIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            RI KNLR+C DCH A K+ISKIV REI IRD +RFHHF +G CSCGD+W
Sbjct: 1619 RITKNLRVCGDCHIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 1667



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 117/432 (27%), Positives = 198/432 (45%), Gaps = 65/432 (15%)

Query: 113  LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
            +FDE+P++N + F   I+ Y  +  + +A+ +F  +   GH ++P  +T    +  S G 
Sbjct: 1082 IFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNM--AGHGIDPDHYTYPCVLKASSGS 1139

Query: 173  AELCPC--VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL------------ 218
             +L     + A V ++G D N FVG  LI  +  CGC+  A +V D +            
Sbjct: 1140 EDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLV 1199

Query: 219  ----FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
                 N  F++AL    +M  +G KP+  T A +L A                   TC +
Sbjct: 1200 AGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPA----------------VTNTCLD 1243

Query: 275  MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
                              +S  + +F ++  K ++ W+ MIA Y    +  +AV++F +M
Sbjct: 1244 -----------------NVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQM 1286

Query: 335  RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
                V P+  +  SVL AC  +  L LG +IH  VVR  L  ++ + NAL+D+YAKCG +
Sbjct: 1287 EDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCL 1346

Query: 395  ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
            E + E+F +   R+ V+W +MI  Y   G+   A+ +FS+M +  +    + + SVL AC
Sbjct: 1347 EYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSAC 1406

Query: 455  ASLAALEPG------MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR-LVFDMMND 507
            +    L+ G      M   C  V       +     ++D+  + G + +A   +  M  +
Sbjct: 1407 SHAGLLDEGRYYFKLMTEECKIVPR-----IEHFVCMVDLLGRAGQVDEAYGFIKQMPME 1461

Query: 508  WNEVSWNAMISG 519
             NE  W A++S 
Sbjct: 1462 PNERVWGALLSA 1473



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/367 (26%), Positives = 175/367 (47%), Gaps = 25/367 (6%)

Query: 55   NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
            + ++Y   L++   ++DL   M IH  V++ G  L++F  N L+++Y K   L +A ++ 
Sbjct: 1125 DHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVL 1184

Query: 115  DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
            DZMP R+ +S+ + + G   + QF +A+ +   +   G  L P A T           A 
Sbjct: 1185 DZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLG--LKPDAGTM----------AS 1232

Query: 175  LCPCVF-ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQM 233
            L P V   C+     D+ +FV    +   +    V +   +   + N    EA++ F QM
Sbjct: 1233 LLPAVTNTCL-----DNVSFVKEMFM-KLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQM 1286

Query: 234  RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
                  P+  + A VL AC  L  + + +  H   ++   + +L +  AL+D+Y K G +
Sbjct: 1287 EDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCL 1346

Query: 294  SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
              AR +F++M  +DV+ W+ MI+ Y       DAV LF RM+   + P+   FVSVL AC
Sbjct: 1347 EYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSAC 1406

Query: 354  ATMEGLDLGNQIHSLVV---RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNH 409
            +    LD G     L+    ++    + FV   ++D+  + G+++ +     + P + N 
Sbjct: 1407 SHAGLLDEGRYYFKLMTEECKIVPRIEHFV--CMVDLLGRAGQVDEAYGFIKQMPMEPNE 1464

Query: 410  VTWNTMI 416
              W  ++
Sbjct: 1465 RVWGALL 1471


>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
 gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
          Length = 677

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 239/642 (37%), Positives = 351/642 (54%), Gaps = 61/642 (9%)

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMR 234
           N  +G  L+ A++ CG   + R +FD +                 N  +++AL  F  M 
Sbjct: 70  NPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMA 129

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
             GF P+N+T+  VLKAC     + V    HG  +K   +M+LY+   L+ +Y K   + 
Sbjct: 130 NQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLD 189

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
            ARR+ +EMP +D++ W+ M+A YAQ     DA++L   M    + P+  T  S+L A  
Sbjct: 190 AARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPA-- 247

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
                               +++    N L   Y K        ++F +  +++ ++WN 
Sbjct: 248 --------------------VTNTSCDNVL---YVK--------DMFVKLKEKSLISWNV 276

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
           MI  YV      +A+ ++ +M    V    V+ SSVL AC  L+A   G ++H    +  
Sbjct: 277 MIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKK 336

Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
              ++++ NALIDMYAKCG + +AR VFD M   + VSW +MIS Y M G   + + +F 
Sbjct: 337 LRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFK 396

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
            M+  G+ P+ + FV VL+ACS+ GL+++G   F +++A YGI P IEHY  MV LLGRA
Sbjct: 397 KMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCF-NLMAEYGITPGIEHYNCMVDLLGRA 455

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLS 654
           G +D+A  L   +P +P+  +W +LL AC +++++ I  L+A H+    PE    +VLLS
Sbjct: 456 GKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYYVLLS 515

Query: 655 NIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLE 703
           NIYA A  W+           K   K PG S +E    V+ F AGD SH     I   L 
Sbjct: 516 NIYAKAGRWQDVETVRSIMNSKGIKKIPGNSNVEINDHVYTFLAGDQSHTQSKEIYKALG 575

Query: 704 WLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLR 763
            L  + ++ GY+P+  + L DV E++KE +L VHSEKLA+ FA+    P S IRI KN+R
Sbjct: 576 VLVGRMKELGYMPETDSALHDVEEEDKECHLAVHSEKLAIVFAILNTKPGSTIRITKNIR 635

Query: 764 ICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +C DCH A K+ISKI +REIIIRD HRFHHF+DG CSCGD+W
Sbjct: 636 VCGDCHVATKLISKIAEREIIIRDTHRFHHFRDGVCSCGDYW 677



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 124/500 (24%), Positives = 223/500 (44%), Gaps = 33/500 (6%)

Query: 32  AALSTQQCSNSTTTPITFSVSEFNSHSYATSLQS--CIQ----NDDLQTAMTIHCQVLKK 85
           ++LS Q  +   T P + +  +       T+L    C +    N D +T   +H ++L  
Sbjct: 5   SSLSRQFSTAKQTKPFSLTTQKPQLSPKFTALTEDLCNKILDVNPDAKTLKKLHSKILID 64

Query: 86  GNCLDLFATNV-LLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGL 144
            N     +  + L+  Y           +FDE+ ++N + F   I+ Y  +  + +A+ +
Sbjct: 65  QNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLV 124

Query: 145 FSTLHREGHELNPFAFTAFLKVLVSMG--WAELCPCVFACVYKLGHDSNAFVGTALIDAF 202
           F T+  +G   + + +   LK     G  W  L   +   V KLG D N ++G  L+  +
Sbjct: 125 FKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQ--IHGAVVKLGLDMNLYIGNGLVSMY 182

Query: 203 SVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAK 262
             C  ++ AR+V D +         +  S    V     N  F   LK C  ++ +++  
Sbjct: 183 GKCKWLDAARRVLDEM------PGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKP 236

Query: 263 SAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTD 322
            A            L  AV      T    +   + +F ++ +K +I W+ MIA Y    
Sbjct: 237 DAGTMG-------SLLPAVT----NTSCDNVLYVKDMFVKLKEKSLISWNVMIAVYVNNA 285

Query: 323 LSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSN 382
           +  +AV+L+ +M+   V P+  +  SVL AC  +    LG +IH  V R  L  ++ + N
Sbjct: 286 MPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLEN 345

Query: 383 ALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPA 442
           AL+D+YAKCG ++ +  +F +   R+ V+W +MI  Y   G+   A+ +F KM +     
Sbjct: 346 ALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTP 405

Query: 443 TEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA--NALIDMYAKCGSITDA-R 499
             + + SVL AC+    ++ G   +C  + A Y +   +   N ++D+  + G I +A  
Sbjct: 406 DWIAFVSVLAACSHAGLVDEGR--YCFNLMAEYGITPGIEHYNCMVDLLGRAGKIDEAYH 463

Query: 500 LVFDMMNDWNEVSWNAMISG 519
           L   M  + NE  W +++S 
Sbjct: 464 LTRQMPMEPNERVWGSLLSA 483



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 104/259 (40%), Gaps = 25/259 (9%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAM---TIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD 109
           E ++ S ++ L +C    DL  A+    IH  V +K    +L   N L+++Y K   L +
Sbjct: 303 EPDAVSISSVLPAC---GDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKE 359

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A  +FD+M  R+ +S+ + I  Y +S Q  +AV LF  +   G   +  AF + L     
Sbjct: 360 ARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSH 419

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNF 229
            G  +     F  + + G          ++D     G +               +EA + 
Sbjct: 420 AGLVDEGRYCFNLMAEYGITPGIEHYNCMVDLLGRAGKI---------------DEAYHL 464

Query: 230 FSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK 289
             QM     +PN   +  +L AC    ++ +A  A     +   E   Y  V L ++Y K
Sbjct: 465 TRQM---PMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYY-VLLSNIYAK 520

Query: 290 SGEISNARRIFEEMPKKDV 308
           +G   +   +   M  K +
Sbjct: 521 AGRWQDVETVRSIMNSKGI 539


>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
          Length = 503

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 211/490 (43%), Positives = 304/490 (62%), Gaps = 11/490 (2%)

Query: 327 AVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMD 386
           A+ELF  + ++    +Q T  +  +AC  +  LD G QIH+  ++ G  SD+ V++ ++D
Sbjct: 14  ALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILD 73

Query: 387 VYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVT 446
           +Y KCG M N+  +F      + V W +MI G V  G   +A+ ++ +M + +V   E T
Sbjct: 74  MYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYT 133

Query: 447 YSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN 506
           ++++++A + + ALE G Q+H   +K +   D  V  +L+DMYAKCG+I DA  +F  MN
Sbjct: 134 FATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMN 193

Query: 507 DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEA 566
             N   WNAM+ G + HG + E + +F  M+  G  P+ ++F+G+LSACS+ GL  +   
Sbjct: 194 VRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYE 253

Query: 567 YFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH 626
           Y  SM  +YGIEP IEHY+ +V  LGRAG + +A K+IE +PF+ S  I RALLGAC I 
Sbjct: 254 YLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQ 313

Query: 627 NNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSW 675
            +VE G+  A  +   EP D A +VLLSNIYA A  W+           K   K+PG SW
Sbjct: 314 GDVEXGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSW 373

Query: 676 IENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLW 735
           I+ + M+H F   D SH   +II   +E +    R+ GY+PD   VL DV ++EKER L+
Sbjct: 374 IDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLY 433

Query: 736 VHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQ 795
            HSEKLA+A+ L   P S+ IR+IKNLR+C DCH AIK ISK+ +REI++RD +RFHHF+
Sbjct: 434 YHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFR 493

Query: 796 DGCCSCGDFW 805
           DG CSCGD+W
Sbjct: 494 DGVCSCGDYW 503



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 149/283 (52%), Gaps = 1/283 (0%)

Query: 224 EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
           ++AL  FS +   G K +  T A   KAC  L  +   K  H  A+K  ++ DL+V   +
Sbjct: 12  KKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGI 71

Query: 284 LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
           LD+Y K G++ NA  +F  +   D + W+ MI+          A+ ++ RMRQ+ V P++
Sbjct: 72  LDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDE 131

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
           +TF ++++A + +  L+ G Q+H+ V+++  +SD FV  +L+D+YAKCG +E++  LF +
Sbjct: 132 YTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKK 191

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
              RN   WN M+VG  Q G   +A+ +F  M    +    V++  +L AC+        
Sbjct: 192 MNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEA 251

Query: 464 MQ-VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMM 505
            + +H +      + ++   + L+D   + G + +A  V + M
Sbjct: 252 YEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETM 294



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 120/219 (54%), Gaps = 8/219 (3%)

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
           M+ GY+   +  KA+ +FS + +    + ++T ++  +AC  L  L+ G Q+H   +KA 
Sbjct: 1   MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG 60

Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
           +D D+ V + ++DMY KCG + +A +VF+ ++  ++V+W +MISG   +G   + L+++ 
Sbjct: 61  FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYH 120

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEH---YTSMVSLL 591
            M+Q    P+  TF  ++ A S    LEQG    + + AN     C+      TS+V + 
Sbjct: 121 RMRQSRVMPDEYTFATLIKASSCVTALEQG----RQLHANVIKLDCVSDPFVGTSLVDMY 176

Query: 592 GRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
            + G+++ A +L + +  + ++ +W A+L     H N E
Sbjct: 177 AKCGNIEDAYRLFKKMNVR-NIALWNAMLVGLAQHGNAE 214



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/308 (23%), Positives = 144/308 (46%), Gaps = 23/308 (7%)

Query: 131 GYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDS 190
           GY + +   +A+ LFS +H+ G + +        K    +   +    + A   K G DS
Sbjct: 4   GYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDS 63

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFD-----------GLFNDCF-----EEALNFFSQMR 234
           +  V + ++D +  CG +  A  VF+            + + C      ++AL  + +MR
Sbjct: 64  DLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMR 123

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
                P+ +TFA ++KA   +  +   +  H   +K     D +V  +L+D+Y K G I 
Sbjct: 124 QSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIE 183

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
           +A R+F++M  +++  W+ M+   AQ   + +AV LF  M+   + P++ +F+ +L AC+
Sbjct: 184 DAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACS 243

Query: 355 ----TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHV 410
               T E  +    +HS+    G+  ++   + L+D   + G ++ + ++    P +   
Sbjct: 244 HAGLTSEAYEY---LHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASA 300

Query: 411 TWNTMIVG 418
           + N  ++G
Sbjct: 301 SINRALLG 308



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 120/265 (45%), Gaps = 19/265 (7%)

Query: 60  ATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPE 119
           AT+ ++C     L     IH   +K G   DL   + +L++Y+K   + +A  +F+ +  
Sbjct: 34  ATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISA 93

Query: 120 RNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCV 179
            + +++ + I G   +    +A+ ++  + +     + + F   +K    +   E    +
Sbjct: 94  PDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQL 153

Query: 180 FACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-------GLFNDCF--------- 223
            A V KL   S+ FVGT+L+D ++ CG +E A ++F         L+N            
Sbjct: 154 HANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNA 213

Query: 224 EEALNFFSQMRAVGFKPNNFTFAFVLKAC--LGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
           EEA+N F  M++ G +P+  +F  +L AC   GL T    +  H        E ++    
Sbjct: 214 EEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGL-TSEAYEYLHSMPNDYGIEPEIEHYS 272

Query: 282 ALLDLYTKSGEISNARRIFEEMPKK 306
            L+D   ++G +  A ++ E MP K
Sbjct: 273 CLVDALGRAGLVQEADKVIETMPFK 297



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 5/167 (2%)

Query: 55  NSHSYATSLQ--SCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           + +++AT ++  SC+    L+    +H  V+K     D F    L+++Y K   + DA +
Sbjct: 130 DEYTFATLIKASSCVTA--LEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYR 187

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           LF +M  RN   +   + G        EAV LF ++   G E +  +F   L      G 
Sbjct: 188 LFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGL 247

Query: 173 -AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL 218
            +E    + +     G +      + L+DA    G V+ A KV + +
Sbjct: 248 TSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETM 294


>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
          Length = 700

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 235/657 (35%), Positives = 368/657 (56%), Gaps = 31/657 (4%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N+ +Y+ ++ +C Q+     A ++HC +LKKG    LF ++ L+++Y K +R+ +A  
Sbjct: 38  EPNAITYSATISACAQSTRPSLATSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARF 97

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHE----LNPFAFTAFLKVLV 168
           LFD+MPER+ +S+ + I GY+      EA GLF ++          ++ F     LK   
Sbjct: 98  LFDDMPERDDVSWNSMIAGYSQRGLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACG 157

Query: 169 SMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD------------ 216
            +G + +  CV     K+G DS+ FV  + +  +  CG ++ A   FD            
Sbjct: 158 GLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNT 217

Query: 217 ---GLFNDCFEE-ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC 272
              G   +C+EE A+  F QM   GFKPN+ TF  VLKA   +    V +  H   LK  
Sbjct: 218 MITGYAQNCYEEEAIELFYQMELEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLG 277

Query: 273 YEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFC 332
             MD++VA AL+D+Y+K  +I +  R F EM K++++ ++ +I  Y+      +A+ ++ 
Sbjct: 278 CSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYS 337

Query: 333 RMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCG 392
           +++   + P+ FTFV +  +C+    +  G Q+H   V+ GL SDV V N++++ Y+KCG
Sbjct: 338 QLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCG 397

Query: 393 RMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLR 452
             ++++E F    + N V W  +I G+ Q GE  KA++ F KM +      E + SSV++
Sbjct: 398 FTDSALEAFESINRPNSVCWAGIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIK 457

Query: 453 ACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS 512
           A +S AA+E G  +H   +K+  D  + V +A+IDMY+KCG + DA+ VF +M + N VS
Sbjct: 458 AVSSWAAVEQGRHLHAHVMKSGLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVS 517

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
           WN+MI+GY+ +G   E L +F  M   G  P  +TFVG+L ACS+ GL+E+G  ++  MV
Sbjct: 518 WNSMITGYAQNGFCKEALLLFQEMTSSGILPTAVTFVGILFACSHAGLVEEGRNFYNLMV 577

Query: 573 ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIG 632
            NYGI P +EH T MV LLGRAG+L++A   +    F     IW +LL AC +H N ++G
Sbjct: 578 HNYGIPPSMEHCTCMVDLLGRAGYLEEAEAFLLSSSFSKEPGIWGSLLSACGVHKNSDVG 637

Query: 633 RLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIEN 678
             +AQH L  EP   +++  LSNIYA    W + +            KEPG SWIE+
Sbjct: 638 SRAAQHCLFLEPHYSSSYTALSNIYASKELWSEVSRIRDLMKDMGVEKEPGCSWIES 694



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/417 (31%), Positives = 219/417 (52%), Gaps = 6/417 (1%)

Query: 208 VEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGC 267
           V +  K+ D       ++AL+ F QM   G +PN  T++  + AC       +A S H  
Sbjct: 7   VRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLATSLHCL 66

Query: 268 ALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDA 327
            LK  +   L+V+  L+ +Y+K   I  AR +F++MP++D + W+ MIA Y+Q  L+ +A
Sbjct: 67  ILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRGLNEEA 126

Query: 328 VELFCRMRQAF----VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNA 383
             LFC M  +     +  + FT  +VL+AC  +    +G  +H   V++G  SD+FVS +
Sbjct: 127 CGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLFVSGS 186

Query: 384 LMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPAT 443
            + +Y KCG ++ +   F +   ++ V WNTMI GY Q     +A+ +F +M  E     
Sbjct: 187 TVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPN 246

Query: 444 EVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFD 503
           + T+  VL+A  +++    G   H   +K    MDV VA AL+DMY+K   I D    F 
Sbjct: 247 DTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFG 306

Query: 504 MMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQ 563
            M+  N VS+NA+I+GYS+ G   E L+V+  +Q  G  P++ TFVG+ S+CS    + +
Sbjct: 307 EMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAE 366

Query: 564 GEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
           G A        +G++  +    S+V+   + G  D A +  E I  +P+ + W  ++
Sbjct: 367 G-AQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESIN-RPNSVCWAGII 421



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 144/256 (56%), Gaps = 4/256 (1%)

Query: 303 MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG 362
           M + +V+ W+  I   A+  L   A+  F +M +A + PN  T+ + + ACA      L 
Sbjct: 1   MLETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLA 60

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
             +H L+++ G  + +FVS+ L+ +Y+K  R++ +  LF + P+R+ V+WN+MI GY Q 
Sbjct: 61  TSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQR 120

Query: 423 GEVGKAMIMFSKMLEE----QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           G   +A  +F  M+      ++  ++ T ++VL+AC  L     G  VH   VK  +D D
Sbjct: 121 GLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSD 180

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
           + V+ + + MY KCG +  A L FD + + + V+WN MI+GY+ +    E +++F  M+ 
Sbjct: 181 LFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMEL 240

Query: 539 RGWRPNNLTFVGVLSA 554
            G++PN+ TF  VL A
Sbjct: 241 EGFKPNDTTFCCVLKA 256



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 118/265 (44%), Gaps = 12/265 (4%)

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
           + N V W + I    + G V +A+  F +ML   +    +TYS+ + ACA          
Sbjct: 3   ETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLATS 62

Query: 466 VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGL 525
           +HCL +K  +   + V++ LI MY+K   I +AR +FD M + ++VSWN+MI+GYS  GL
Sbjct: 63  LHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRGL 122

Query: 526 SAEVLKVFDLMQQ--RGWR--PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
           + E   +F  M      W+   ++ T   VL AC   G    G+      V   G +  +
Sbjct: 123 NEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAV-KIGFDSDL 181

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA----CIIHNNVEIGRLSAQ 637
               S V +  + G LD A    + I     ++ W  ++      C     +E+      
Sbjct: 182 FVSGSTVYMYCKCGILDMAGLAFDQIE-NKDIVAWNTMITGYAQNCYEEEAIEL--FYQM 238

Query: 638 HILDFEPEDEATHVLLSNIYAMARS 662
            +  F+P D     +L    AM+ S
Sbjct: 239 ELEGFKPNDTTFCCVLKASTAMSDS 263


>gi|356529928|ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Glycine max]
          Length = 690

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 226/596 (37%), Positives = 350/596 (58%), Gaps = 14/596 (2%)

Query: 223 FEEALNFFS--QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
           + EA+  F   ++   GF     T+  ++ AC+GL +IR  K      + + +E DLYV 
Sbjct: 96  YREAMELFEILELEHDGFDVGGSTYDALVSACVGLRSIRGVKRVFNYMVNSGFEPDLYVM 155

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
             +L ++ K G + +AR++F+EMP+KD+  W  MI  +  +    +A  LF  M + F  
Sbjct: 156 NRVLFVHVKCGLMLDARKLFDEMPEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFND 215

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
               TF ++++A A +  + +G QIHS  ++ G+  D FVS AL+D+Y+KCG +E++  +
Sbjct: 216 GRSRTFTTMIRASAGLGLVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCV 275

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F + P++  V WN++I  Y   G   +A+  + +M +        T S V+R CA LA+L
Sbjct: 276 FDQMPEKTTVGWNSIIASYALHGYSEEALSFYYEMRDSGAKIDHFTISIVIRICARLASL 335

Query: 461 EPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY 520
           E   Q H   V+  YD D+V   AL+D Y+K G + DA  VF+ M   N +SWNA+I+GY
Sbjct: 336 EYAKQAHAALVRRGYDTDIVANTALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIAGY 395

Query: 521 SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPC 580
             HG   E +++F+ M + G  PN++TF+ VLSACS  GL E+G   F SM  ++ ++P 
Sbjct: 396 GNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPR 455

Query: 581 IEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHIL 640
             HY  MV LLGR G LD+A +LI   PF+P+  +W  LL AC +H N+E+G+L+A+++ 
Sbjct: 456 AMHYACMVELLGREGLLDEAYELIRSAPFKPTTNMWATLLTACRMHENLELGKLAAENLY 515

Query: 641 DFEPEDEATHVLLSNIYAMARSWEKAAS-----KEPGL------SWIENQGMVHYFRAGD 689
             EPE    +++L N+Y  +   ++AA      K  GL      +WIE +   + F  GD
Sbjct: 516 GMEPEKLCNYIVLLNLYNSSGKLKEAAGVLQTLKRKGLRMLPACTWIEVKKQSYAFLCGD 575

Query: 690 TSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFK 749
            SH+    I   +  + ++  + GY+ +  A+L DV E+E +R L  HSEKLA+AF L  
Sbjct: 576 KSHSQTKEIYEKVNNMMVEISRHGYVEENKALLPDVDEEE-QRILKYHSEKLAIAFGLIN 634

Query: 750 MPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            P  +P++I +  R+C DCH+AIK I+ +  REI++RD  RFHHF+DG CSCGD+W
Sbjct: 635 TPHWTPLQITQGHRVCGDCHSAIKFIAMVTGREIVVRDASRFHHFRDGSCSCGDYW 690



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 191/378 (50%), Gaps = 18/378 (4%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +Y   + +C+    ++    +   ++  G   DL+  N +L V+VK   + DA KLFDEM
Sbjct: 119 TYDALVSACVGLRSIRGVKRVFNYMVNSGFEPDLYVMNRVLFVHVKCGLMLDARKLFDEM 178

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
           PE++  S++T I G+  S  F EA GLF  +  E ++     FT  ++    +G  ++  
Sbjct: 179 PEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGRSRTFTTMIRASAGLGLVQVGR 238

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FND 221
            + +C  K G   + FV  ALID +S CG +E A  VFD +                 + 
Sbjct: 239 QIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHG 298

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
             EEAL+F+ +MR  G K ++FT + V++ C  L ++  AK AH   ++  Y+ D+    
Sbjct: 299 YSEEALSFYYEMRDSGAKIDHFTISIVIRICARLASLEYAKQAHAALVRRGYDTDIVANT 358

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           AL+D Y+K G + +A  +F  M +K+VI W+ +IA Y       +AVE+F +M +  + P
Sbjct: 359 ALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIAGYGNHGQGEEAVEMFEQMLREGMIP 418

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALM-DVYAKCGRMENSVEL 400
           N  TF++VL AC+     + G +I   + R   +    +  A M ++  + G ++ + EL
Sbjct: 419 NHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMVELLGREGLLDEAYEL 478

Query: 401 FAESP-KRNHVTWNTMIV 417
              +P K     W T++ 
Sbjct: 479 IRSAPFKPTTNMWATLLT 496



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/335 (23%), Positives = 134/335 (40%), Gaps = 62/335 (18%)

Query: 53  EFN---SHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD 109
           EFN   S ++ T +++      +Q    IH   LK+G   D F +  L+++Y K   + D
Sbjct: 212 EFNDGRSRTFTTMIRASAGLGLVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIED 271

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A  +FD+MPE+ T+ + + I  Y +     EA+  +  +   G +++ F  +  +++   
Sbjct: 272 AHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSFYYEMRDSGAKIDHFTISIVIRICAR 331

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF------ 223
           +   E      A + + G+D++    TAL+D +S  G +E A  VF+ +           
Sbjct: 332 LASLEYAKQAHAALVRRGYDTDIVANTALVDFYSKWGRMEDAWHVFNRMRRKNVISWNAL 391

Query: 224 ----------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY 273
                     EEA+  F QM   G  PN+ TF  VL AC                     
Sbjct: 392 IAGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLSAC--------------------- 430

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMP-----KKDVIPWSFMIARYAQTDLSIDAV 328
                         + SG       IF  M      K   + ++ M+    +  L  +A 
Sbjct: 431 --------------SYSGLSERGWEIFYSMSRDHKVKPRAMHYACMVELLGREGLLDEAY 476

Query: 329 ELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
           EL   +R A   P    + ++L AC   E L+LG 
Sbjct: 477 EL---IRSAPFKPTTNMWATLLTACRMHENLELGK 508


>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
 gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
          Length = 797

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 239/715 (33%), Positives = 375/715 (52%), Gaps = 105/715 (14%)

Query: 196 TALIDAFSVCGCVEFARKVFD----GLFNDCF--------------EEALNFFSQMRAVG 237
           T LI A+S  G ++ +RK+F     G+ +  F                A+  F  M+   
Sbjct: 83  TTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDN 142

Query: 238 FKPNNFTFAFVLKA-CLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE---- 292
           F+P+N+TF  VL A  L  +  +  +  H   +K+       V  AL+  Y K       
Sbjct: 143 FRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSA 202

Query: 293 -----ISNARRIFEEMPKKDV-------------------------------IPWSFMIA 316
                ++ AR++F+EMP +D                                + W+ MI+
Sbjct: 203 QSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMIS 262

Query: 317 RYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV--GL 374
            YA   L ++A E+F +M  + +  ++FTF SV+  CA      LG ++H+  ++     
Sbjct: 263 GYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANP 322

Query: 375 LSDVF--VSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYV------------ 420
             DV   V+NAL+  Y KCG+++ + E+F + P+R+ V+WN ++ GYV            
Sbjct: 323 APDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFF 382

Query: 421 -------------------QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
                              Q+G   +A+  F++M  +     +  ++  + +C+ L +L+
Sbjct: 383 NEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLK 442

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
            G Q+H   V+  Y+  +   NALI MYA+CG +  A  +F  M   + +SWNAMI+   
Sbjct: 443 HGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALG 502

Query: 522 MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
            HG   + +++F+ M + G  P+ ++F+ V+SACS+ GL+++G  YF SM   YG+ P  
Sbjct: 503 QHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDE 562

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
           EHY  ++ LL RAG   +A +++E +PF+P   IW ALL  C IH N+++G  +A+ + +
Sbjct: 563 EHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLFE 622

Query: 642 FEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDT 690
            +P+ + T+VLLSN+YA+A  W           ++   KEPG SWIE +  VH F  GD 
Sbjct: 623 LKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVHSFLVGDA 682

Query: 691 SHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKM 750
           +H ++  I   LE L ++ RK GY+PD   VL DV  D KE  L  HSEKLA+A+   K+
Sbjct: 683 NHPEVRQIYNYLEQLVLEMRKIGYVPDTKCVLHDVESDLKEHELSTHSEKLAVAYGFMKL 742

Query: 751 PPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           P  + +R+ KNLRIC DCH A K +SK+V REI++RD  RFHHF+DG CSCGD+W
Sbjct: 743 PHGATVRVFKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 797



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 128/476 (26%), Positives = 208/476 (43%), Gaps = 111/476 (23%)

Query: 260 VAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARY- 318
           +A+  H   + + ++   ++   L+D+Y+KS +++ AR +F+E+P+ D++  + +IA Y 
Sbjct: 31  LARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYS 90

Query: 319 AQTDLSID--------------------------------AVELFCRMRQAFVAPNQFTF 346
           A  DL +                                 A+ELFC M++    P+ +TF
Sbjct: 91  AAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTF 150

Query: 347 VSVLQACATM-EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR---------MEN 396
            SVL A A + E      Q+H  VV+ G      V NAL+  Y KC           M  
Sbjct: 151 TSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAE 210

Query: 397 SVELFAESPKRNHVTWNTMIVGYV-----------------QLGEVGKAMI--------- 430
           + +LF E P R+ ++W T+I GYV                 +LG    AMI         
Sbjct: 211 ARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLY 270

Query: 431 -----MFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK--ANYDMDVV--V 481
                MF KM+  ++   E T++SV+  CA+      G ++H   +K  AN   DV   V
Sbjct: 271 LEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPV 330

Query: 482 ANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY--------------------- 520
            NALI  Y KCG +  A+ +F+ M + + VSWN ++SGY                     
Sbjct: 331 NNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNI 390

Query: 521 ----------SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKS 570
                     +  G + E LK F+ M+ +G+ P +  F G + +CS  G L+ G     +
Sbjct: 391 LSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQ-LHA 449

Query: 571 MVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH 626
            V  YG E  +    +++++  R G +D A  L   +P   ++  W A++ A   H
Sbjct: 450 QVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAIS-WNAMIAALGQH 504



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 106/466 (22%), Positives = 186/466 (39%), Gaps = 100/466 (21%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNR---------LPDATKLFDEMPERNTISFVTT 128
           +HC V+K G        N L++ YVK            + +A KLFDEMP R+ +S+ T 
Sbjct: 170 LHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTI 229

Query: 129 IQGYTVSSQ-------------------------------FVEAVGLFSTLHREGHELNP 157
           I GY  ++                                ++EA  +F  +     +L+ 
Sbjct: 230 ITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDE 289

Query: 158 FAFTAFLKVLVSMG----WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARK 213
           F FT+ + V  + G      E+       V     D    V  ALI  +  CG V+ A++
Sbjct: 290 FTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQE 349

Query: 214 VFDGL---------------------------FNDC--------------------FEEA 226
           +F+ +                           FN+                      EEA
Sbjct: 350 IFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEA 409

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           L FF++M+  GF+P ++ FA  + +C  L +++  +  H   ++  YE  L    AL+ +
Sbjct: 410 LKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITM 469

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y + G +  A  +F  MP  D I W+ MIA   Q      A+ELF  M +  + P++ +F
Sbjct: 470 YARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISF 529

Query: 347 VSVLQACA----TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           ++V+ AC+      EG    + +H++    G+  D      ++D+  + G+   + E+  
Sbjct: 530 LTVISACSHAGLVKEGRKYFDSMHNV---YGVNPDEEHYARIIDLLCRAGKFSEAKEVME 586

Query: 403 ESP-KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTY 447
             P +     W  ++ G    G +   +    ++ E + P  + TY
Sbjct: 587 SMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLFELK-PQHDGTY 631



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 86/358 (24%), Positives = 143/358 (39%), Gaps = 80/358 (22%)

Query: 346 FVSVLQACATMEGLD--LGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
           + S+LQ C     +   L   +H+ ++  G      + N L+D+Y+K  ++  +  LF E
Sbjct: 14  YGSLLQICCLQSPISYSLARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDE 73

Query: 404 SPK---------------------------------RNHVTWNTMIVGYVQLGEVGKAMI 430
            P+                                 R+ V +N MI  Y    +   A+ 
Sbjct: 74  IPQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIE 133

Query: 431 MFSKMLEEQVPATEVTYSSVLRACASLAALEPG-MQVHCLTVKANYDMDVVVANALIDMY 489
           +F  M  +       T++SVL A A +A  E    Q+HC  VK+       V NALI  Y
Sbjct: 134 LFCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSY 193

Query: 490 AKCGS---------ITDARLVFDMMNDWNE------------------------------ 510
            KC +         + +AR +FD M + +E                              
Sbjct: 194 VKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKL 253

Query: 511 -VSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE---A 566
            V+WNAMISGY+  GL  E  ++F  M     + +  TF  V+S C+N G    G+   A
Sbjct: 254 GVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHA 313

Query: 567 YFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACI 624
           YF   VAN   +  +    ++++   + G +D A ++   +P +  ++ W  +L   +
Sbjct: 314 YFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMP-ERDLVSWNIILSGYV 370


>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 263/804 (32%), Positives = 415/804 (51%), Gaps = 55/804 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  S A+ L+      ++     +H   ++ G  LD       + +Y +   L DA ++F
Sbjct: 120 NGFSLASLLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVF 179

Query: 115 DE--MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGH-ELNPFAFTAFLKVLVSMG 171
           DE  +   + + + + I  Y     +VE + LF  +   G        + + +    S G
Sbjct: 180 DETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSG 239

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF-------- 223
             +    V   + K G ++   +  +L+  +  CG ++ A ++F+ +             
Sbjct: 240 EEKYGAMVHGRIIKAGLEATN-LWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIA 298

Query: 224 --------EEALNFFSQMRAV--GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY 273
                   E AL  F +M  V    +PN  TF  +L A  GL  +R  +  H    +   
Sbjct: 299 ANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSL 358

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
           E+D  +  +L+  Y+K  E+  AR IFE +  +D+I W+ M+A Y Q +      ++F R
Sbjct: 359 EVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKR 418

Query: 334 MRQAFVAPNQFTFVSVLQACAT-MEGL---DLGNQIHSLVVR---VGLLSDVFVSNALMD 386
           M  + + P+  +   +  A +    GL     G +IH  ++R    G +S + VSNA++ 
Sbjct: 419 MMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVS-LSVSNAILK 477

Query: 387 VYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVT 446
           +YAK  R+ ++ ++F     R+  +WN M+ GY +  +    +++F  +L++  P   V+
Sbjct: 478 MYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVS 537

Query: 447 YSSVLRACASLAALEPGMQVHCLTVK-------ANYDMDVVVANALIDMYAKCGSITDAR 499
            S +L +C  L +L+ G Q H +  K        + D  + + NALI MY+KCGSI DA 
Sbjct: 538 LSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAA 597

Query: 500 LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGG 559
            VF  M   +  SW AMI+G + HGL+ E L++F+ M+  G +PN +TF+ +L AC++GG
Sbjct: 598 QVFLKMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLMACAHGG 657

Query: 560 LLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE-GI----PFQPSVM 614
           L+++G  YF SM  +YG+ P IEHY  M+ L GR+G  D+A  L+E GI    P+   ++
Sbjct: 658 LVQEGSYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKSLVEFGITLFKPYHDDIL 717

Query: 615 -IWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE--------- 664
            +W+ LLGAC     +++G  +A  IL+ EPEDEAT++LL+N+YA +  WE         
Sbjct: 718 NLWKVLLGACHASKQLDLGVEAATKILELEPEDEATYILLANLYASSGLWEDAIKVRKAM 777

Query: 665 --KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVL 722
             K   KE G SWI+     H F AGD  H     I   L  LN   R+ GY+P    VL
Sbjct: 778 RDKGLRKEVGCSWIDTGNRRHVFVAGDVYHPQRKEIYEKLAQLNYSCRRMGYVPMTELVL 837

Query: 723 RDVREDEKERYLWVHSEKLALAFALFKMP-PSSPIRIIKNLRICVDCHTAIKIISKIVQR 781
            DV E EKE  L  HSEKLA++F L      +  IR++KNLR+C DCH+ +K  S + +R
Sbjct: 838 HDVDETEKEAILGCHSEKLAVSFGLLNCGVGNGVIRVMKNLRVCEDCHSWMKFASLLEKR 897

Query: 782 EIIIRDVHRFHHFQDGCCSCGDFW 805
           EI++RD  RFH F+DG CSCGD+W
Sbjct: 898 EILLRDSQRFHLFRDGSCSCGDYW 921



 Score =  231 bits (590), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 160/604 (26%), Positives = 284/604 (47%), Gaps = 46/604 (7%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
           HS+  + Q   QN    +     C    K            L    +  RL  A +LFD 
Sbjct: 32  HSHLRNKQLEFQNHGFSSQFIFRCSACSK-----------FLVSQSEHERLKCAQQLFDN 80

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
            P R+ IS+   I  Y+    F +A GLF  +  EG + N F+  + LKV  S G   LC
Sbjct: 81  FPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCSTGEIGLC 140

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG------------------L 218
             +     + G   ++ +  A I  +S CG +E A++VFD                   +
Sbjct: 141 RQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYI 200

Query: 219 FNDCFEEALNFFSQMRAVG-FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
           F+ C+ E L  F +M +VG   P   T+A V+ AC      +     HG  +K   E   
Sbjct: 201 FHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIKAGLEAT- 259

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
            +  +L+  Y K G + +A ++FE + +KDV+ W+ MIA   Q     +A+ LF RM + 
Sbjct: 260 NLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKV 319

Query: 338 F--VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
              V PN+ TF+S+L A + +  L  G +IH+ + R+ L  D  ++N+L+  Y+KC  + 
Sbjct: 320 EPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVG 379

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML----EEQVPATEVTYSSVL 451
            + E+F     R+ ++WN+M+ GY Q  + G+   +F +M+    E    +  + +++  
Sbjct: 380 KAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAAS 439

Query: 452 RACASLAALEPGMQVHCLTVK--ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWN 509
           R  + L     G ++H   ++      + + V+NA++ MYAK   I DA  +F  M + +
Sbjct: 440 RDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRD 499

Query: 510 EVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFK 569
             SWNAM+ GYS +    +VL +F  + ++G+  ++++   +L++C     L+ G+ +  
Sbjct: 500 SYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHA 559

Query: 570 SMVANYGIEPCIEHYT------SMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGAC 623
            +   +  + C    +      +++S+  + G +  AA++   +  +  V  W A++  C
Sbjct: 560 VVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKME-RKDVFSWTAMITGC 618

Query: 624 IIHN 627
             H 
Sbjct: 619 AHHG 622


>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
          Length = 1408

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 251/800 (31%), Positives = 402/800 (50%), Gaps = 87/800 (10%)

Query: 93   ATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAV-GLFSTLHRE 151
            A   L++ Y+       A  +F     RN + + + ++ +  S+  +  V  +F  LH +
Sbjct: 609  AAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGK 668

Query: 152  GHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFA 211
            G   +   ++  LK    +    L   +  C+ K G D + ++  AL++ +  C  +E A
Sbjct: 669  GVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKA 728

Query: 212  RKVFDGLFN----------------DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGL 255
             +VF  + N                +  ++ +  F +M+    K    T   VL+AC  +
Sbjct: 729  NQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKM 788

Query: 256  DTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMI 315
              +  AK  HG   +   + D+ +   L+ +Y+K+G++  ARR+F+ M  ++   W+ MI
Sbjct: 789  GALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMI 848

Query: 316  ARYA----------------QTDLSIDAVELFC-------------------RMRQAFVA 340
            + YA                 +D+  D V   C                   RM+     
Sbjct: 849  SSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFK 908

Query: 341  PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
            PN  +  SVLQA + +  L++G + H  V+R G   DV+V  +L+D+Y K   + ++  +
Sbjct: 909  PNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAV 968

Query: 401  FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSS----------- 449
            F     RN   WN+++ GY   G    A+ + ++M +E +    VT++            
Sbjct: 969  FDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCA 1028

Query: 450  -------------VLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSIT 496
                         +LRACASL+ L+ G ++HCL+++  +  DV VA ALIDMY+K  S+ 
Sbjct: 1029 RKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLK 1088

Query: 497  DARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS 556
            +A  VF  + +    SWN MI G+++ GL  E + VF+ MQ+ G  P+ +TF  +LSAC 
Sbjct: 1089 NAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACK 1148

Query: 557  NGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIW 616
            N GL+ +G  YF SM+ +Y I P +EHY  MV LLGRAG+LD+A  LI  +P +P   IW
Sbjct: 1149 NSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIW 1208

Query: 617  RALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEK----------- 665
             ALLG+C IH N+     +A+++   EP + A ++L+ N+Y++   WE            
Sbjct: 1209 GALLGSCRIHKNLXFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAA 1268

Query: 666  AASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDV 725
                    SWI+    VH F + +  H D   I   L  L  + +K GY+PD++ V +++
Sbjct: 1269 GVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNM 1328

Query: 726  REDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIII 785
             E EK++ L  H+EKLA+ + L KM    PIR+IKN RIC DCH+A K IS +  RE+ +
Sbjct: 1329 DEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFL 1388

Query: 786  RDVHRFHHFQDGCCSCGDFW 805
            RD  RFHHF++G CSC DFW
Sbjct: 1389 RDGVRFHHFREGKCSCNDFW 1408



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 132/549 (24%), Positives = 250/549 (45%), Gaps = 81/549 (14%)

Query: 54   FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
            F+S  Y+ +L++C +  D+   M IH  ++K+G  LD++    L+N Y +   L  A ++
Sbjct: 672  FDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQV 731

Query: 114  FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
            F EMP    + +   I     S +  + V LF  +     +         L+    MG  
Sbjct: 732  FHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGAL 791

Query: 174  ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD----------------- 216
                 +   V++ G DS+  +   LI  +S  G +E AR+VFD                 
Sbjct: 792  NAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSY 851

Query: 217  ---GLFNDCF-------------------------------EEALNFFSQMRAVGFKPNN 242
               G  ND +                               EE LN   +M+  GFKPN+
Sbjct: 852  AALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNS 911

Query: 243  FTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEE 302
             +   VL+A   L  + + K  HG  L+  ++ D+YV  +L+D+Y K+  + +A+ +F+ 
Sbjct: 912  SSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDN 971

Query: 303  MPKKDVIPWSFMIARYAQTDLSIDAVELFCRM-------------------------RQA 337
            M  +++  W+ +++ Y+   +  DA+ L  +M                         R+A
Sbjct: 972  MKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKA 1031

Query: 338  FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            F+ PN  +   +L+ACA++  L  G +IH L +R G + DVFV+ AL+D+Y+K   ++N+
Sbjct: 1032 FM-PNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNA 1090

Query: 398  VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
             ++F     +   +WN MI+G+   G   +A+ +F++M +  V    +T++++L AC + 
Sbjct: 1091 HKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNS 1150

Query: 458  AALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWN 514
              +  G + +  ++  +Y +   + +   ++D+  + G + +A  L+  M    +   W 
Sbjct: 1151 GLIGEGWK-YFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWG 1209

Query: 515  AMISGYSMH 523
            A++    +H
Sbjct: 1210 ALLGSCRIH 1218



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 104/447 (23%), Positives = 190/447 (42%), Gaps = 77/447 (17%)

Query: 47   ITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNR 106
            + FS  +  + +    LQ+C +   L  A  IH  V + G   D+   N L+++Y K  +
Sbjct: 766  MQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGK 825

Query: 107  LPDATKLFDEMPERNTISFVTTIQGYT------------------------------VSS 136
            L  A ++FD M  RNT S+ + I  Y                               +S 
Sbjct: 826  LELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSG 885

Query: 137  QFV-----EAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSN 191
             F+     E + +   +  EG + N  + T+ L+ +  +G+  +       V + G D +
Sbjct: 886  HFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCD 945

Query: 192  AFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRA 235
             +VGT+LID +     +  A+ VFD +                F   FE+AL   +QM  
Sbjct: 946  VYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEK 1005

Query: 236  VGFKPNNFTF---------------AF---------VLKACLGLDTIRVAKSAHGCALKT 271
             G KP+  T+               AF         +L+AC  L  ++  K  H  +++ 
Sbjct: 1006 EGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRN 1065

Query: 272  CYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELF 331
             +  D++VA AL+D+Y+KS  + NA ++F  +  K +  W+ MI  +A   L  +A+ +F
Sbjct: 1066 GFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVF 1125

Query: 332  CRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVYAK 390
              M++  V P+  TF ++L AC     +  G     S++    ++  +     ++D+  +
Sbjct: 1126 NEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGR 1185

Query: 391  CGRMENSVELFAESP-KRNHVTWNTMI 416
             G ++ + +L    P K +   W  ++
Sbjct: 1186 AGYLDEAWDLIHTMPLKPDATIWGALL 1212


>gi|302773067|ref|XP_002969951.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
 gi|300162462|gb|EFJ29075.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
          Length = 789

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 260/773 (33%), Positives = 406/773 (52%), Gaps = 42/773 (5%)

Query: 68  QNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVT 127
           ++  L     IH +V++ G    LF +N LL++Y +L    DA  L D MP RN +S+  
Sbjct: 24  ESTSLDQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRRNAVSWNA 83

Query: 128 TIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLG 187
            I+    +  F  ++  F  + ++G   +   F + +K   ++   E+   V     K G
Sbjct: 84  VIRANAQAGDFPRSLLFFQRMLQDGSVPDAVVFLSLIKAPGTIQEGEI---VQDFAKKSG 140

Query: 188 HDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFS 231
            D +  VGTALI  +  CG ++ A+  FD +                  D  E++L  F 
Sbjct: 141 FDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQSLRVFR 200

Query: 232 QMRAVGFKPNNFTFAFVLKACLGL--DTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK 289
           +M   G  PN  T   +  A  G+           H C++ +       VA ++++L+ +
Sbjct: 201 EMLLQGIAPNAVTIICIASAVAGIAAKITTCGNLIHACSIDSGLISVTTVANSIINLFGR 260

Query: 290 SGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSV 349
            G IS A  IFE++ ++DV  W+ MIA +A+     +A++L+ RM    + P+  TFV+V
Sbjct: 261 GGNISRANEIFEKVDQRDVCSWNTMIAAFAKNGHVFEALDLYGRM---TIRPDGVTFVNV 317

Query: 350 LQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNH 409
           L+AC   + L+ G  IH      G  SD+ V+ AL+ +Y +CGR++ + E+FA       
Sbjct: 318 LEACDCPDDLERGESIHRDARAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAIQHPGV 377

Query: 410 VTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ-VHC 468
           +T N +I  + Q G    +++ F +ML+  +  ++ T  +VL ACA+  A     + +H 
Sbjct: 378 ITLNAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVLGACATSGAAASAGRDLHR 437

Query: 469 LTVKANYD---MDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGL 525
              +   D    D++V NAL++MYAKCG +  AR +FD     N  +WNA+++GY+ HG 
Sbjct: 438 WMAECPGDCDPHDILVRNALVNMYAKCGDLDAARGIFDAAPQGNVSTWNAIMAGYAQHGY 497

Query: 526 SAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYT 585
           +   +++   MQ  G  P+ ++F   LSA S+   +E G   F ++  +YG+ P +EHY 
Sbjct: 498 ADMAVRLLYEMQLAGISPDPISFTAALSASSHARQVEDGARIFYAISRDYGLIPSVEHYG 557

Query: 586 SMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPE 645
           ++V LLGRAG L++A   +  +        W ALLGAC IH + +    +A+ I+  +P 
Sbjct: 558 AVVDLLGRAGWLEEAEGFLRSMAIAADAAAWMALLGACRIHKDQDRAMRAAEAIVAIDPS 617

Query: 646 DEATHVLLSNIYAMARSWEKA-----------ASKEPGLSWIENQGMVHYFRAGDTSHAD 694
             A++ +LSN+Y+ A  W++A           A KEPG SWIE +  VH F   D SH  
Sbjct: 618 HGASYTVLSNVYSAAGRWDEAEEIRRRMGENGARKEPGRSWIEVKNRVHEFAVKDRSHPR 677

Query: 695 MNIIRGMLEWLN--MKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPP 752
              I   L+ L   +KS +  Y+PD+ +VL DV ++ +E  LW HSEKLAL F L     
Sbjct: 678 TGEIYERLDELRVVLKSEE-DYVPDVGSVLHDVEDEHRENLLWHHSEKLALGFGLIGTKE 736

Query: 753 SSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            S I IIKNLRIC DCH  +K+ SK  +REI++RD +RFHHF  G CSC D W
Sbjct: 737 GSKITIIKNLRICEDCHVVMKLTSKNTKREIVVRDCYRFHHFNGGACSCSDCW 789



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 90/190 (47%), Gaps = 7/190 (3%)

Query: 431 MFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYA 490
           M S +L    P    ++  + R      +L+ G ++H   +++ Y   + ++N L+ MYA
Sbjct: 1   MISSVLPPAAPVD--SWRDLARLVDESTSLDQGRKIHRRVIESGYGDHLFLSNHLLHMYA 58

Query: 491 KCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVG 550
           +  S  DA L+ D M   N VSWNA+I   +  G     L  F  M Q G  P+ + F+ 
Sbjct: 59  RLESSRDAELLLDRMPRRNAVSWNAVIRANAQAGDFPRSLLFFQRMLQDGSVPDAVVFLS 118

Query: 551 VLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQ 610
           ++ A    G +++GE   +      G +      T+++ + GR G LD+A    + I  +
Sbjct: 119 LIKAP---GTIQEGE-IVQDFAKKSGFDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQ-E 173

Query: 611 PSVMIWRALL 620
             V+ W AL+
Sbjct: 174 RGVVSWNALI 183



 Score = 44.7 bits (104), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 49/224 (21%), Positives = 84/224 (37%), Gaps = 40/224 (17%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           ++   L++C   DDL+   +IH      G   DL     L+++Y +  RL  A ++F  +
Sbjct: 313 TFVNVLEACDCPDDLERGESIHRDARAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAI 372

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGL---FSTLHREGHELNPFAFTAFLKVLVSMG--- 171
                I+    I  +   +QF  A G    F  + + G   + F   A L    + G   
Sbjct: 373 QHPGVITLNAIIAAH---AQFGRADGSLLHFRQMLQLGIRPSKFTLVAVLGACATSGAAA 429

Query: 172 --------WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD------- 216
                   W   CP    C        +  V  AL++ ++ CG ++ AR +FD       
Sbjct: 430 SAGRDLHRWMAECPG--DC-----DPHDILVRNALVNMYAKCGDLDAARGIFDAAPQGNV 482

Query: 217 --------GLFNDCFEE-ALNFFSQMRAVGFKPNNFTFAFVLKA 251
                   G     + + A+    +M+  G  P+  +F   L A
Sbjct: 483 STWNAIMAGYAQHGYADMAVRLLYEMQLAGISPDPISFTAALSA 526


>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 923

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 257/783 (32%), Positives = 409/783 (52%), Gaps = 35/783 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N++++AT +  C   +D    + +   V+  G    +   N L+++   L R+ DA KLF
Sbjct: 144 NANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANSLISMLGNLGRVHDAEKLF 203

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGH-ELNPFAFTAFLKVLVSMGWA 173
             M ER+T+S+   +  Y+      ++  +FS + R G    +     + + V  S  + 
Sbjct: 204 YRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDATTLCSLISVCASSDYV 263

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF-------------- 219
                V +   + G  S   V  AL++ +S  G +  A  +F  +               
Sbjct: 264 SYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFWNMSRRDLISWNTMISSY 323

Query: 220 --NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
             N    +AL    Q+      P+  TF+  L AC     +   +  H   L+     +L
Sbjct: 324 VQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMDGRMVHAMTLQLSLHHNL 383

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
            V  +L+ +Y K   I +A RIF+ MP  DV+  + +I  YA  +    A+++F  MR+ 
Sbjct: 384 LVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYAVLEDGTKAMQVFFWMRRG 443

Query: 338 FVAPNQFTFVSVLQACATMEGL-DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
            V  N  T V++L +  +   L + G  +H+  +  G LSD +VSN+L+ +YAKCG +E+
Sbjct: 444 EVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFLSDDYVSNSLITMYAKCGDLES 503

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           S  +F     R+ V+WN MI   VQ G   +++ +F  M  +      +  +  + + AS
Sbjct: 504 SNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDMRHDGNGLDHICLAECMSSSAS 563

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND---WNEVSW 513
           LA+LE GMQ+H L +K     D  V NA +DMY KCG + +   +  M+ D     +  W
Sbjct: 564 LASLEEGMQLHGLGLKCGLGNDSHVVNAAMDMYGKCGKMDE---MLKMLPDPAIRPQQCW 620

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA 573
           N +ISGY+ +G   E  + F  M   G  P+ +TFV +LSACS+ GL+++G  Y+ SM +
Sbjct: 621 NTLISGYARYGYFKEAEETFKHMISVGRTPDYVTFVTLLSACSHAGLVDKGIDYYNSMSS 680

Query: 574 NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGR 633
            +G+ P I+H   +V +LGR G   +A K IE +P  P+ +IWR+LL +   H N++IGR
Sbjct: 681 VFGVSPGIKHCVCIVDILGRLGRFAEAEKFIEDMPVLPNDLIWRSLLSSSRTHKNLDIGR 740

Query: 634 LSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMV 682
            +A+ +L+ +P D++ +VLLSN+YA +  W               +K P  SW++ +  V
Sbjct: 741 KAAKRLLELDPFDDSAYVLLSNLYATSARWSDVDRVRSHMKTINLNKIPACSWLKQKKEV 800

Query: 683 HYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLA 742
             F  GD SH   + I   L+ + +K R+ GY+ D S+ L D  E++KE+ LW HSEKLA
Sbjct: 801 STFGIGDHSHKHADKIYMKLDEILLKLREVGYVADTSSALHDTDEEQKEQNLWNHSEKLA 860

Query: 743 LAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCG 802
           LA+ L  +P    +RI KNLR+C DCH   K++S +  REI++RD +RFHHF+ G CSC 
Sbjct: 861 LAYGLITVPEGCTVRIFKNLRVCADCHLVFKLVSMVFDREIVLRDPYRFHHFKGGSCSCS 920

Query: 803 DFW 805
           DFW
Sbjct: 921 DFW 923



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 137/485 (28%), Positives = 232/485 (47%), Gaps = 26/485 (5%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           IH    K G  ++++    LL++Y     + DA +LF EMPERN +S+   +   + +  
Sbjct: 66  IHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNGH 125

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
             EA+G +  + RE    N  AF   + +  S+        VF+ V   G      V  +
Sbjct: 126 LEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANS 185

Query: 198 LIDAFSVCGCVEFARKVF--------------------DGLFNDCFEEALNFFSQMRAVG 237
           LI      G V  A K+F                    +GL +  F      FS MR  G
Sbjct: 186 LISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFR----VFSDMRRGG 241

Query: 238 -FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNA 296
             + +  T   ++  C   D +      H   L+T     + V  AL+++Y+ +G++++A
Sbjct: 242 LLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADA 301

Query: 297 RRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM 356
             +F  M ++D+I W+ MI+ Y Q   ++DA++   ++      P++ TF S L AC++ 
Sbjct: 302 EFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSP 361

Query: 357 EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMI 416
             L  G  +H++ +++ L  ++ V N+L+ +Y KC  +E++  +F   P  + V+ N +I
Sbjct: 362 GALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILI 421

Query: 417 VGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP-GMQVHCLTVKANY 475
             Y  L +  KAM +F  M   +V    +T  ++L +  S   L   G+ +H  T+ A +
Sbjct: 422 GSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGF 481

Query: 476 DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDL 535
             D  V+N+LI MYAKCG +  +  VF  + + + VSWNAMI+    HG   E LK+F  
Sbjct: 482 LSDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMD 541

Query: 536 MQQRG 540
           M+  G
Sbjct: 542 MRHDG 546



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 111/412 (26%), Positives = 198/412 (48%), Gaps = 21/412 (5%)

Query: 203 SVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAK 262
           ++ GCV   R             A +    MR  G   + F  A ++ AC   +  R   
Sbjct: 14  AISGCVRCGRD----------STAFSMLRGMRERGVPLSGFALASLVTACERWEEGRACG 63

Query: 263 SA-HGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQT 321
           +A H    K    +++Y+  ALL LY     + +A+R+F EMP+++V+ W+ ++   +  
Sbjct: 64  AAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSN 123

Query: 322 DLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVS 381
               +A+  + RMR+  +A N   F +V+  C ++E    G Q+ S V+  GL   V V+
Sbjct: 124 GHLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVA 183

Query: 382 NALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVP 441
           N+L+ +    GR+ ++ +LF    +R+ V+WN ++  Y   G   K+  +FS M    + 
Sbjct: 184 NSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLL 243

Query: 442 ATE-VTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARL 500
             +  T  S++  CAS   +  G  VH L ++      + V NAL++MY+  G + DA  
Sbjct: 244 RHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEF 303

Query: 501 VFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGL 560
           +F  M+  + +SWN MIS Y  +G + + LK    +      P+ +TF   L ACS+ G 
Sbjct: 304 LFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGA 363

Query: 561 LEQGEAYFKSMVANYGIEPCIEHY----TSMVSLLGRAGHLDKAAKLIEGIP 608
           L  G      MV    ++  + H      S++++ G+   ++ A ++ + +P
Sbjct: 364 LMDGR-----MVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMP 410



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/352 (26%), Positives = 165/352 (46%), Gaps = 7/352 (1%)

Query: 303 MPKKDVIP--WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATME-GL 359
           MP     P  W   I+   +      A  +   MR+  V  + F   S++ AC   E G 
Sbjct: 1   MPDDHRTPSSWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGR 60

Query: 360 DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGY 419
             G  IH+L  + GL+ +V++  AL+ +Y     + ++  LF E P+RN V+W  ++V  
Sbjct: 61  ACGAAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVAL 120

Query: 420 VQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDV 479
              G + +A+  + +M  E++      +++V+  C SL     G+QV    + +     V
Sbjct: 121 SSNGHLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQV 180

Query: 480 VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
            VAN+LI M    G + DA  +F  M + + VSWNA++S YS  GL ++  +VF  M++ 
Sbjct: 181 SVANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRG 240

Query: 540 G-WRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLD 598
           G  R +  T   ++S C++   +  G     S+    G+   I    ++V++   AG L 
Sbjct: 241 GLLRHDATTLCSLISVCASSDYVSYGSG-VHSLCLRTGLHSYIPVVNALVNMYSSAGKLA 299

Query: 599 KAAKLIEGIPFQPSVMIWRALLGACIIH-NNVEIGRLSAQHILDFEPEDEAT 649
            A  L   +  +  ++ W  ++ + + + NN++  +   Q +   E  D  T
Sbjct: 300 DAEFLFWNMS-RRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMT 350


>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
           [Vitis vinifera]
          Length = 657

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 217/603 (35%), Positives = 338/603 (56%), Gaps = 42/603 (6%)

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNA-------- 296
           F+ +L++C+  +++ + K  H   + +    D +++  LL+LY+K G++  A        
Sbjct: 55  FSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMP 114

Query: 297 -----------------------RRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
                                  R++F+EMP+++V  W+ M+A   Q + + + + LF R
Sbjct: 115 RKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSR 174

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           M +    P++F   SVL+ CA +  L  G Q+H  V + G   ++ V ++L  +Y KCG 
Sbjct: 175 MNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGS 234

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           +     L    P +N V WNT+I G  Q G   + +  ++ M        ++T+ SV+ +
Sbjct: 235 LGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISS 294

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
           C+ LA L  G Q+H   +KA   + V V ++LI MY++CG +  +  VF    + + V W
Sbjct: 295 CSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCW 354

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA 573
           ++MI+ Y  HG   E + +F+ M+Q     N++TF+ +L ACS+ GL E+G  +F  MV 
Sbjct: 355 SSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVE 414

Query: 574 NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGR 633
            YG++P +EHYT MV LLGR G +++A  LI  +P +  V+ W+ LL AC IH   E+ R
Sbjct: 415 KYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMAR 474

Query: 634 LSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMV 682
             ++ +   +P D   +VLLSNI+A  + W           ++   KEPG+SW+E +  +
Sbjct: 475 RISEEVFRLDPRDPVPYVLLSNIHASDKRWDDVSDVRKAMRDRKLKKEPGISWLEVKNQI 534

Query: 683 HYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLA 742
           H F  GD SH     I   L  L  + +K GY+PD+ +VL D+  ++KE  L  HSEKLA
Sbjct: 535 HQFCMGDKSHPKSVEIASYLRELTSEMKKRGYVPDIDSVLHDMDVEDKEYSLVHHSEKLA 594

Query: 743 LAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCG 802
           +AFAL   P  +PIR+IKNLR+C DCH AIK IS+I  REII+RD  RFHHF++G CSCG
Sbjct: 595 IAFALLYTPVGTPIRVIKNLRVCSDCHVAIKYISEISNREIIVRDSSRFHHFKNGRCSCG 654

Query: 803 DFW 805
           D+W
Sbjct: 655 DYW 657



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 134/478 (28%), Positives = 223/478 (46%), Gaps = 62/478 (12%)

Query: 54  FNSHSYATS------LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRL 107
           F+SH ++        LQSCI  + L     +H  ++  G   D F +N LLN+Y K  +L
Sbjct: 44  FSSHIWSEPSLFSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQL 103

Query: 108 PDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVL 167
             A  LF  MP +N +S    I GY  S  +V A  +F     E  E N   + A     
Sbjct: 104 DTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKMFD----EMPERNVATWNAM---- 155

Query: 168 VSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEAL 227
                                               V G ++F        FN   EE L
Sbjct: 156 ------------------------------------VAGLIQFE-------FN---EEGL 169

Query: 228 NFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLY 287
             FS+M  +GF P+ F    VL+ C GL  +   +  HG   K  +E +L V  +L  +Y
Sbjct: 170 GLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMY 229

Query: 288 TKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFV 347
            K G +    R+   MP ++V+ W+ +IA  AQ     + ++ +  M+ A   P++ TFV
Sbjct: 230 MKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFV 289

Query: 348 SVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKR 407
           SV+ +C+ +  L  G QIH+ V++ G    V V ++L+ +Y++CG +E S+++F E    
Sbjct: 290 SVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENG 349

Query: 408 NHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVH 467
           + V W++MI  Y   G   +A+ +F++M +E++ A +VT+ S+L AC+     E G++  
Sbjct: 350 DVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFF 409

Query: 468 CLTV-KANYDMDVVVANALIDMYAKCGSITDAR-LVFDMMNDWNEVSWNAMISGYSMH 523
            L V K      +     ++D+  + GS+ +A  L+  M    + ++W  ++S   +H
Sbjct: 410 DLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIH 467


>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 939

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 234/729 (32%), Positives = 392/729 (53%), Gaps = 30/729 (4%)

Query: 34  LSTQQCSNSTTTPITFSVSE---FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLD 90
           L   +C  S    +    SE   F+  ++A  L++C   +D    + +H  +++ G   D
Sbjct: 151 LQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKD 210

Query: 91  LFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHR 150
           +   + LL++Y K  RL D+ K+F E+P +N + +   I G   + + +  + LF  + +
Sbjct: 211 VVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQK 270

Query: 151 EGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEF 210
            G  ++   + +  +    +   ++   + A   K    S+  VGTA +D ++ CG +  
Sbjct: 271 VGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLAD 330

Query: 211 ARKVFDGLFN---DCFE-------------EALNFFSQMRAVGFKPNNFTFAFVLKACLG 254
           A+++F+ L      C+              EAL FF  +   G   N  + +    AC  
Sbjct: 331 AQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACAS 390

Query: 255 LDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFM 314
           +      +  H  ++K+    ++ VA ++LD+Y K   +S A  +F+EM ++D + W+ +
Sbjct: 391 IKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAV 450

Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL 374
           IA + Q     + + LF  M +  + P+QFT+ SVL+AC++ + L+ G +IH+ +++ GL
Sbjct: 451 IAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGL 510

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
             D FV  AL+D+Y KCG +E + ++     ++  V+WN +I G+  L     A   F +
Sbjct: 511 GLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYE 570

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGS 494
           ML+  V     TY+ VL ACA+LA++  G Q+H   +K     DV + + L+DMY+KCG+
Sbjct: 571 MLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGN 630

Query: 495 ITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSA 554
           + D+ LVF+   + + V+WNAMI GY+ HGL  E L  F+ MQ    RPN+ TFV +L A
Sbjct: 631 MQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRA 690

Query: 555 CSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVM 614
           C++ G +++G  YF +M+  YG+EP IEHY+ M+ ++GR+G + +A KLI+ +PF+   +
Sbjct: 691 CAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAV 750

Query: 615 IWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA------- 667
           IWR LL  C IH N+EI   +   IL  EPED +  +LLSNIYA A  W K +       
Sbjct: 751 IWRTLLSICKIHGNIEIAEKATNAILQLEPEDSSACILLSNIYADAGMWGKVSEMRKMMR 810

Query: 668 ----SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLR 723
                KEPG SWIE +  VH F  G+ +H     I  +L  L  + +  GYIPD+  ++ 
Sbjct: 811 YNKLKKEPGCSWIEVKDEVHAFLVGNKTHPRYEEIYKILSVLLDEMKWIGYIPDIDFLID 870

Query: 724 DVREDEKER 732
           +  E+ +++
Sbjct: 871 EESEEYEQK 879



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 168/636 (26%), Positives = 310/636 (48%), Gaps = 60/636 (9%)

Query: 34  LSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFA 93
           +ST Q  N T  P           +++  +Q C   + L+     H +++  G   D++ 
Sbjct: 29  ISTLQ-QNQTKLPTKI-------RTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYI 80

Query: 94  TNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLF-STLHREG 152
           +N L+ +Y++ + L  A K+F++M +R+ IS+ T I GY  + +   A   F  T  R+ 
Sbjct: 81  SNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDV 140

Query: 153 HELNPFAFTAFLK---------VLVSMGWAE------------LCPC-----------VF 180
              N    + FL+         V + MG +E            L  C           V 
Sbjct: 141 VSWNSM-LSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVH 199

Query: 181 ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF-----------DGLFNDCFEE---- 225
             + ++G   +   G+AL+D ++ C  ++ + K+F             +   C +     
Sbjct: 200 GLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHI 259

Query: 226 -ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
             L  F +M+ VG   +   +A V ++C GL  ++V    H  ALK  +  D+ V  A L
Sbjct: 260 LGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATL 319

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
           D+Y K G +++A+RIF  +PK  +  ++ +I    + +   +A++ F  + ++ +  N+ 
Sbjct: 320 DMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEI 379

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           +      ACA+++G   G Q+HSL V+  L S++ V+N+++D+Y KC  +  +  +F E 
Sbjct: 380 SLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEM 439

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
            +R+ V+WN +I  + Q G   + + +F+ ML  ++   + TY SVL+AC+S  AL  GM
Sbjct: 440 ERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGM 499

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
           ++H   +K+   +D  V  ALIDMY KCG I +A+ + D +     VSWNA+I+G+++  
Sbjct: 500 EIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLK 559

Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY 584
            S +    F  M +   +P+N T+  VL AC+N   +  G+      +    +   +   
Sbjct: 560 HSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQ-IHGQIIKLELHSDVYIT 618

Query: 585 TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
           +++V +  + G++  +A + E  P +  V  W A++
Sbjct: 619 STLVDMYSKCGNMQDSALVFEKAPNKDFV-TWNAMI 653



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 225/420 (53%), Gaps = 36/420 (8%)

Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
           TF+ +++ C   ++++  K AH   + + +  D+Y++  L+ +Y +   ++ A ++FE+M
Sbjct: 45  TFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKM 104

Query: 304 -------------------------------PKKDVIPWSFMIARYAQTDLSIDAVELFC 332
                                          PK+DV+ W+ M++ + Q      ++++F 
Sbjct: 105 SQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFL 164

Query: 333 RM-RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC 391
            M R   V  +Q TF  VL+AC+ +E   LG Q+H L+VR+G   DV   +AL+D+YAKC
Sbjct: 165 DMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKC 224

Query: 392 GRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVL 451
            R+++S+++F+E P +N V W+ +I G VQ  E    + +F +M +  +  ++  Y+SV 
Sbjct: 225 KRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVF 284

Query: 452 RACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEV 511
           R+CA L+AL+ G Q+H   +K ++  D+ V  A +DMYAKCGS+ DA+ +F+ +   +  
Sbjct: 285 RSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQ 344

Query: 512 SWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSN-GGLLEQGEAYFKS 570
            +NA+I G   +    E L+ F L+ + G   N ++  G  SAC++  G L+  + +  S
Sbjct: 345 CYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLS 404

Query: 571 MVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
           + +      C+ +  S++ + G+   L +A  + + +  + +V  W A++ A   + N E
Sbjct: 405 VKSTLRSNICVAN--SILDMYGKCEALSEACCMFDEMERRDAVS-WNAVIAAHEQNGNEE 461



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 110/260 (42%), Gaps = 52/260 (20%)

Query: 437 EEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSIT 496
           + ++P    T+S +++ C+   +L+PG Q H   + + +  DV ++N L+ MY +C  + 
Sbjct: 36  QTKLPTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLN 95

Query: 497 DARLVFDMMNDWNEVSWNAMISGYSMHG----------------------------LSAE 528
            A  VF+ M+  + +S+N MISGY+  G                             + E
Sbjct: 96  YAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGE 155

Query: 529 VLKVFDLMQQRGWRP----NNLTFVGVLSACS---NGGLLEQGEAYFKSMVANYGIEPCI 581
             K  D+    G       +  TF  VL ACS   +GGL  Q       ++   G    +
Sbjct: 156 CRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQ----VHGLIVRMGFYKDV 211

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
              ++++ +  +   LD + K+   IP +  V  W A++  C+ ++         +HIL 
Sbjct: 212 VTGSALLDMYAKCKRLDDSLKIFSEIPVKNWV-CWSAIIAGCVQND---------EHILG 261

Query: 642 FEPEDEATHVLLS---NIYA 658
            E   E   V +    +IYA
Sbjct: 262 LELFKEMQKVGIGVSQSIYA 281


>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 231/586 (39%), Positives = 338/586 (57%), Gaps = 51/586 (8%)

Query: 271 TCYEMDLYVAVALLDLYTKSGEIS--NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAV 328
           T +  D + A  LL   T S  I    + +IF+ +   +   W+ M+  Y Q++ +  A+
Sbjct: 55  TGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKAL 114

Query: 329 ELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVY 388
            L+  M +  V P+ +T+  V+QACA       G +IH  V++VG  SDV+V N L+++Y
Sbjct: 115 LLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMY 174

Query: 389 AKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK--------------------- 427
           A CG M ++ +LF ESP  + V+WN+++ GYV+ G++G+                     
Sbjct: 175 AVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSA 234

Query: 428 -------------AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
                        A++MF +M    +   EV   SVL ACA L+ ++ G  +H L ++  
Sbjct: 235 LISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMG 294

Query: 475 YDMDVVVANALI----DMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVL 530
            +  V + NALI    DMY KCG + +A  VF+ M +    SWNA+I G +++GL    L
Sbjct: 295 IESYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSL 354

Query: 531 KVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSL 590
            +F  M+  G  PN +TF+GVL AC + GL+++G  +F SM+  +GIEP ++HY  MV L
Sbjct: 355 DMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDL 414

Query: 591 LGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATH 650
           LGRAG L++A KLIE +P  P V  W ALLGAC  H + E+G    + +++ +P+ +  H
Sbjct: 415 LGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFH 474

Query: 651 VLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIR 699
           VLLSNI+A    WE           +   K PG S IE  G+VH F AGD +H  +N + 
Sbjct: 475 VLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVE 534

Query: 700 GMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRII 759
           GML  +  + +  GY PD + V  D+ E+EKE  L+ HSEKLA+AF L  + P +PIRI+
Sbjct: 535 GMLNEMAKRLKMEGYAPDTNEVSLDIDEEEKETTLFRHSEKLAIAFGLLTISPPTPIRIM 594

Query: 760 KNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           KNLRIC DCHTA K+ISK   REI++RD HRFH+F++G CSC D+W
Sbjct: 595 KNLRICNDCHTAAKLISKAYAREIVVRDRHRFHYFKEGACSCMDYW 640



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 166/345 (48%), Gaps = 48/345 (13%)

Query: 224 EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRV----AKSAHGCALKTCYEMDLYV 279
           E+AL  +  M      P+N+T+  V++AC     +R+     K  H   LK  ++ D+YV
Sbjct: 111 EKALLLYKLMVKNNVGPDNYTYPLVVQAC----AVRLLEFGGKEIHDHVLKVGFDSDVYV 166

Query: 280 AVALLDLYTKSGEISNARRIFEEMP----------------------------------K 305
              L+++Y   G + +AR++F+E P                                  +
Sbjct: 167 QNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQVMEAWKLFNEMDE 226

Query: 306 KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
           KD++ WS +I+ Y Q  +  +A+ +F  M    +  ++   VSVL ACA +  +  G  I
Sbjct: 227 KDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMI 286

Query: 366 HSLVVRVGLLSDVFVSNALM----DVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQ 421
           H LV+R+G+ S V + NAL+    D+Y KCG +EN++E+F    ++   +WN +I+G   
Sbjct: 287 HGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAV 346

Query: 422 LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM-QVHCLTVKANYDMDVV 480
            G V +++ MFS+M    V   E+T+  VL AC  +  ++ G      +  K   + +V 
Sbjct: 347 NGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVK 406

Query: 481 VANALIDMYAKCGSITDARLVFDMMNDWNEV-SWNAMISGYSMHG 524
               ++D+  + G + +A  + + M    +V +W A++     HG
Sbjct: 407 HYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHG 451



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/308 (27%), Positives = 146/308 (47%), Gaps = 42/308 (13%)

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCG--RMENSVELFAESPKRNHVTWNTMIVGYV 420
           N+I S ++  G +SD F ++ L+          ++ S+++F      N   WNTM+  Y+
Sbjct: 46  NRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYI 105

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV 480
           Q     KA++++  M++  V     TY  V++ACA       G ++H   +K  +D DV 
Sbjct: 106 QSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVY 165

Query: 481 VANALIDMYAKCGSITDARLVFD-------------------------MMNDW---NE-- 510
           V N LI+MYA CG++ DAR +FD                         +M  W   NE  
Sbjct: 166 VQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQVMEAWKLFNEMD 225

Query: 511 ----VSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEA 566
               VSW+A+ISGY  +G+  E L +F  M   G R + +  V VLSAC++  +++ G+ 
Sbjct: 226 EKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGK- 284

Query: 567 YFKSMVANYGIEPCIEHYTSMVSLLG----RAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
               +V   GIE  +    +++ +      + G ++ A ++  G+  +  V  W AL+  
Sbjct: 285 MIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGME-EKGVSSWNALIIG 343

Query: 623 CIIHNNVE 630
             ++  VE
Sbjct: 344 LAVNGLVE 351



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 77/329 (23%), Positives = 135/329 (41%), Gaps = 59/329 (17%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           ++++Y   +Q+C           IH  VLK G   D++  N L+N+Y     + DA KLF
Sbjct: 128 DNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLF 187

Query: 115 DEMP----------------------------------ERNTISFVTTIQGYTVSSQFVE 140
           DE P                                  E++ +S+   I GY  +  + E
Sbjct: 188 DESPVLDSVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEE 247

Query: 141 AVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALI- 199
           A+ +F  ++  G  L+     + L     +   +    +   V ++G +S   +  ALI 
Sbjct: 248 ALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIH 307

Query: 200 ---DAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKP 240
              D +  CGCVE A +VF+G+                 N   E +L+ FS+M+  G  P
Sbjct: 308 MYSDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIP 367

Query: 241 NNFTFAFVLKACLGLDTIRVAKSAHGCAL-KTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           N  TF  VL AC  +  +   +      + K   E ++     ++DL  ++G ++ A ++
Sbjct: 368 NEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKL 427

Query: 300 FEEMP-KKDVIPWSFMIA---RYAQTDLS 324
            E MP   DV  W  ++    ++  T++ 
Sbjct: 428 IESMPMAPDVATWGALLGACKKHGDTEMG 456


>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Vitis vinifera]
          Length = 703

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 267/762 (35%), Positives = 400/762 (52%), Gaps = 90/762 (11%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +Y + +    +   +++A  +  ++  KG    + + N ++  Y + NR  +A  LFD+M
Sbjct: 18  AYNSQIARYARIGQIESARRVFDEMPDKG----IVSWNSMVAGYFQNNRPREARYLFDKM 73

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
           PERNT+S+   I GY  +    EA   F T+     E N  ++TA ++            
Sbjct: 74  PERNTVSWNGLISGYVKNRMVSEARKAFDTMP----ERNVVSWTAMVR------------ 117

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVG 237
                          +V   L+                         EA   F QM    
Sbjct: 118 --------------GYVQEGLVS------------------------EAETLFWQMP--- 136

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR 297
            + N  ++  +L    GL  +R    A G         D+     ++  Y + G ++ AR
Sbjct: 137 -EKNVVSWTVMLG---GLIQVRRIDEARGL-FDIMPVKDVVARTNMISGYCQEGRLAEAR 191

Query: 298 RIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATME 357
            +F+EMP+++VI W+ MI+ Y Q      A +LF    +     N+ ++ ++L       
Sbjct: 192 ELFDEMPRRNVISWTTMISGYVQNGQVDVARKLF----EVMPEKNEVSWTAMLM------ 241

Query: 358 GLDLGNQIH--SLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTM 415
           G   G +I   S +     +  V   NA++  + + G +  + ++F +  +++  TW+ M
Sbjct: 242 GYTQGGRIEEASELFDAMPVKAVVACNAMILGFGQNGEVAKARQVFDQIREKDDGTWSAM 301

Query: 416 IVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY 475
           I  Y + G   +A+ +F+ M  E V +   +  SVL  CASLA+L+ G QVH   VK+ +
Sbjct: 302 IKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQF 361

Query: 476 DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDL 535
           D DV VA+ LI MY KCG +  AR +FD  +  + V WN++I+GY+ HGL  E L+VF  
Sbjct: 362 DSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHE 421

Query: 536 MQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAG 595
           M   G   + +TFVGVLSACS  G +++G   F+SM + Y +EP  EHY  MV LLGRAG
Sbjct: 422 MCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAG 481

Query: 596 HLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSN 655
            ++ A  LI+ +P +   +IW ALLGAC  H N+ +  ++A+ +L  EP++   ++LLSN
Sbjct: 482 LVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPKNAGPYILLSN 541

Query: 656 IYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAG-DTSHADMNIIRGMLE 703
           IYA    W            K  SK PG SWIE +  VH F  G  T H +++ I  MLE
Sbjct: 542 IYASKGRWGDVAELRRNMRVKKVSKSPGCSWIEVEKRVHMFTGGVSTKHPELSSIMKMLE 601

Query: 704 WLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLR 763
            L+   R+AGY PD S VL DV E+EK R L  HSE+LA+AF L K+P   PIR++KNLR
Sbjct: 602 KLDGMLREAGYYPDSSFVLHDVDEEEKVRSLGHHSERLAVAFGLLKVPEGMPIRVMKNLR 661

Query: 764 ICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +C DCH+AIK+I+KI  REII+RD +RFHHF+DG CSC D+W
Sbjct: 662 VCGDCHSAIKLIAKITGREIILRDANRFHHFKDGFCSCRDYW 703



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/412 (23%), Positives = 184/412 (44%), Gaps = 53/412 (12%)

Query: 50  SVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD 109
           ++ E N  S+   ++  +Q   +  A T+  Q+ +K    ++ +  V+L   +++ R+ +
Sbjct: 103 TMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEK----NVVSWTVMLGGLIQVRRIDE 158

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A  LFD MP ++ ++    I GY    +  EA  LF  + R     N  ++T  +   V 
Sbjct: 159 ARGLFDIMPVKDVVARTNMISGYCQEGRLAEARELFDEMPRR----NVISWTTMISGYVQ 214

Query: 170 MGWAELCPCVFACVYK----------LGHDSNAFVG-----------------TALIDAF 202
            G  ++   +F  + +          +G+     +                   A+I  F
Sbjct: 215 NGQVDVARKLFEVMPEKNEVSWTAMLMGYTQGGRIEEASELFDAMPVKAVVACNAMILGF 274

Query: 203 SVCGCVEFARKVFDGLF---------------NDCFE-EALNFFSQMRAVGFKPNNFTFA 246
              G V  AR+VFD +                   FE EALN F+ M+  G + N  +  
Sbjct: 275 GQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLI 334

Query: 247 FVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK 306
            VL  C  L ++   +  H   +K+ ++ D++VA  L+ +Y K G++  AR+IF+    K
Sbjct: 335 SVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPK 394

Query: 307 DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIH 366
           D++ W+ +I  YAQ  L  +A+++F  M  + +A +  TFV VL AC+    +  G +I 
Sbjct: 395 DIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIF 454

Query: 367 SLVVRVGLLSDVFVSNALM-DVYAKCGRMENSVELFAESP-KRNHVTWNTMI 416
             +    L+       A M D+  + G + ++++L  + P + + + W  ++
Sbjct: 455 ESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALL 506



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 79/165 (47%), Gaps = 14/165 (8%)

Query: 480 VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
           +  N+ I  YA+ G I  AR VFD M D   VSWN+M++GY  +    E   +FD M +R
Sbjct: 17  IAYNSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPER 76

Query: 540 GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDK 599
               N +++ G++S      ++ +    F +M      E  +  +T+MV    + G + +
Sbjct: 77  ----NTVSWNGLISGYVKNRMVSEARKAFDTMP-----ERNVVSWTAMVRGYVQEGLVSE 127

Query: 600 AAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEP 644
           A  L   +P + +V+ W  +LG  I    ++     A+ + D  P
Sbjct: 128 AETLFWQMP-EKNVVSWTVMLGGLIQVRRID----EARGLFDIMP 167


>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
          Length = 1145

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 261/812 (32%), Positives = 408/812 (50%), Gaps = 108/812 (13%)

Query: 67  IQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFV 126
           +QN D+  A  +   +  +    D+ + N +L  Y     + +A  LF+ MPERN +S+ 
Sbjct: 137 VQNGDITLARKLFDAMPSR----DVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWT 192

Query: 127 TTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKL 186
             I GY +  Q   A  +F T+  EG         + L  +  +G   +   +   V+K 
Sbjct: 193 VMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKT 252

Query: 187 GHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFA 246
           G + +  VGTA+++ ++        + V      +  + A+ FF  M A     N +T++
Sbjct: 253 GFERDVVVGTAILNGYT--------KDV------NMLDSAVKFFEGMAA----RNEYTWS 294

Query: 247 FVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV----ALLDLYTKSGEISNARRIFEE 302
            ++ A      I  A +         Y+ D   +V    ++L    + G I +A+ +F++
Sbjct: 295 TIIAALSQAGRIDDAFA--------VYQRDPLKSVPSRTSMLTGLARYGRIDDAKILFDQ 346

Query: 303 MPKKDVIPWSFMIARYAQTDLSIDAVELFCRM---------------------RQAFVAP 341
           + + +V+ W+ MI  Y Q ++  +A +LF RM                      QA V+ 
Sbjct: 347 IHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSL 406

Query: 342 NQFTFVSVLQ----------ACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC 391
                  +L           AC+ +E L+ G Q+HSL V+ G   + +V NAL+ +Y K 
Sbjct: 407 QALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKY 466

Query: 392 ----------GRM---------------------ENSVELFAESPKRNHVTWNTMIVGYV 420
                      RM                     + + ++F   P  + V+W T+I    
Sbjct: 467 RSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACA 526

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV 480
           Q  +  +A+ +F  ML E+        + +L    +L A + G Q+H + +K   D  +V
Sbjct: 527 QADQGNEAVEIFRSMLHERELPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLV 586

Query: 481 VANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG 540
           VANAL+ MY KC S  D+  VFD M + +  +WN +I+GY+ HGL  E ++++ LM   G
Sbjct: 587 VANALVSMYFKCSS-ADSLKVFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAG 645

Query: 541 WRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKA 600
             PN +TFVG+L ACS+ GL+++G  +FKSM ++YG+ P +EHY  MV LLGRAG +  A
Sbjct: 646 VLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGA 705

Query: 601 AKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMA 660
              I  +P +P  +IW ALLGAC IH NVEIGR +A+ +   EP +   +V+LSNIY+  
Sbjct: 706 EHFIYDMPIEPDSVIWSALLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQ 765

Query: 661 RSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKS 709
             W           E+  +K+PG SW++ +  +H F  GD  H  +  I   L  L    
Sbjct: 766 GMWDEVAKVRKLMKERGVNKDPGCSWMQIKNKMHSFVTGDEEHEQIQNIYATLWELYTLL 825

Query: 710 RKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCH 769
           +  GY+PD   VL D+ E++KE  L  HSEKLA+A+ L   P   PI+I+KNLRIC DCH
Sbjct: 826 KATGYVPDTDFVLHDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCH 885

Query: 770 TAIKIISKIVQREIIIRDVHRFHHFQDGCCSC 801
           T IK +S + +REI +RD +RFHHF++G CSC
Sbjct: 886 TFIKFVSSVTKREIDVRDGNRFHHFRNGSCSC 917



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 79/326 (24%), Positives = 117/326 (35%), Gaps = 96/326 (29%)

Query: 291 GEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVL 350
           G +  AR +F+ MP +D+I W+ MI  Y    +  DA                       
Sbjct: 47  GRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMP-DA----------------------- 82

Query: 351 QACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHV 410
                  G  L + I    +R G +        L+  YA+ GR+ ++  +F     RN V
Sbjct: 83  -------GRSLADAISGGNLRTGTI--------LLSGYARAGRVRDARRVFDGMGVRNTV 127

Query: 411 TWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLT 470
            WN M+  YVQ G++  A  +F  M     P+                            
Sbjct: 128 AWNAMVTCYVQNGDITLARKLFDAM-----PSR--------------------------- 155

Query: 471 VKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVL 530
                  DV   N ++  Y     + +AR +F+ M + N VSW  MISGY +        
Sbjct: 156 -------DVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAW 208

Query: 531 KVFDLMQQRGWRPNNLTFVGVLSAC---SNGGLLE------QGEAYFKSMVANYGIEPCI 581
            +F  M   G  P     V VLSA       G+LE          + + +V    I   +
Sbjct: 209 DMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAI---L 265

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGI 607
             YT  V++      LD A K  EG+
Sbjct: 266 NGYTKDVNM------LDSAVKFFEGM 285



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/308 (22%), Positives = 116/308 (37%), Gaps = 64/308 (20%)

Query: 65  SCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTIS 124
           +C   + L+T   +H   +K G   + +  N L+ +Y K   +    ++FD M  ++T+S
Sbjct: 427 ACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVS 486

Query: 125 F-------------------------------VTTIQGYTVSSQFVEAVGLFSTLHREGH 153
           +                                T I     + Q  EAV +F ++  E  
Sbjct: 487 YNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERE 546

Query: 154 ELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARK 213
             NP   T  L +  ++G  +L   +     KLG DS   V  AL+  +  C   + + K
Sbjct: 547 LPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSAD-SLK 605

Query: 214 VFDGL-FNDCF---------------EEALNFFSQMRAVGFKPNNFTFAFVLKACL---- 253
           VFD +   D F                EA+  +  M + G  PN  TF  +L AC     
Sbjct: 606 VFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGL 665

Query: 254 ---GLDTIRVAKSAHG-CALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDV 308
              G    +   S +G   L   Y         ++DL  ++G++  A     +MP + D 
Sbjct: 666 VDEGHQFFKSMSSDYGLTPLLEHY-------ACMVDLLGRAGDVQGAEHFIYDMPIEPDS 718

Query: 309 IPWSFMIA 316
           + WS ++ 
Sbjct: 719 VIWSALLG 726



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 107/242 (44%), Gaps = 26/242 (10%)

Query: 389 AKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYS 448
            + GR+  + E+F   P R+ + WN+MI  Y   G       +   +    +    +  S
Sbjct: 44  GRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTILLS 103

Query: 449 SVLRACASLAALE--PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN 506
              RA     A     GM V           + V  NA++  Y + G IT AR +FD M 
Sbjct: 104 GYARAGRVRDARRVFDGMGVR----------NTVAWNAMVTCYVQNGDITLARKLFDAMP 153

Query: 507 DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQ-GE 565
             +  SWN M++GY    L  E   +F+ M +R    N +++  ++S      L+EQ G 
Sbjct: 154 SRDVSSWNTMLTGYCHSQLMEEARNLFERMPER----NGVSWTVMISGYV---LIEQHGR 206

Query: 566 AY--FKSMVANYGIEPCIEHYTSMVSL---LGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
           A+  F++M+   G+ P   +  S++S    LG+ G L+    L+    F+  V++  A+L
Sbjct: 207 AWDMFRTMLCE-GMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAIL 265

Query: 621 GA 622
             
Sbjct: 266 NG 267



 Score = 39.3 bits (90), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 11/142 (7%)

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
           +A I    + G + +AR VFD M   + ++WN+MI  Y  +G+      + D +     R
Sbjct: 37  SARIRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLR 96

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
              +    +LS  +  G +      F  M    G+   +  + +MV+   + G +  A K
Sbjct: 97  TGTI----LLSGYARAGRVRDARRVFDGM----GVRNTVA-WNAMVTCYVQNGDITLARK 147

Query: 603 LIEGIPFQPSVMIWRALL-GAC 623
           L + +P +  V  W  +L G C
Sbjct: 148 LFDAMPSR-DVSSWNTMLTGYC 168


>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Vitis vinifera]
          Length = 623

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 227/605 (37%), Positives = 345/605 (57%), Gaps = 49/605 (8%)

Query: 247 FVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL----DLYTKSGEISNARRIFEE 302
           F L+ C  L  +++    H   ++T    D++ A  L+    D  + +  I  A RIF +
Sbjct: 22  FSLETCSDLTHLKII---HAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQ 78

Query: 303 MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG 362
           +   ++  ++ MI  ++ +     A   + + ++  + P+  TF  ++++C  +  + +G
Sbjct: 79  IQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMG 138

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYA-------------------------------KC 391
           +Q H  +++ G   DV+V N+L+ +YA                               KC
Sbjct: 139 SQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKC 198

Query: 392 GRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVL 451
           G +E++ +LF + P++N VTW+TMI GY Q     KA+ +F  +  + V A E    SV+
Sbjct: 199 GDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVI 258

Query: 452 RACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEV 511
            +CA L ALE G + H   VK    +++++  AL+DMYA+CGSI  A  VF+ + + + +
Sbjct: 259 SSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTL 318

Query: 512 SWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSM 571
           SW A+I+G +MHG S   LK F  M + G  P ++TF  VLSACS+GGL+E+G   F+SM
Sbjct: 319 SWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESM 378

Query: 572 VANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEI 631
             ++ +EP +EHY  MV LLGRAG L++A + +  +P +P+  +W ALLGAC IH N EI
Sbjct: 379 KRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEI 438

Query: 632 GRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQG 680
           G    + ++   P+    +VLLSNIYA A+ WEK              K PG S IE  G
Sbjct: 439 GERVGKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLIELDG 498

Query: 681 MVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEK 740
            VH F  GD+SH +M+ I  M E + M+ R AGY  + +  L D+ E+EKE  L  HSEK
Sbjct: 499 RVHKFTIGDSSHPEMDKIERMWEEILMRIRAAGYRGNTADALFDIDEEEKESALHRHSEK 558

Query: 741 LALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCS 800
           LA+AF + +    +PIRI+KNLR+C DCHTA K+ISK+  RE+I+RD +RFHHF+ G CS
Sbjct: 559 LAIAFGMMRSEAGTPIRIVKNLRVCEDCHTATKLISKVFGRELIVRDRNRFHHFRQGLCS 618

Query: 801 CGDFW 805
           C D+W
Sbjct: 619 CMDYW 623



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 97/428 (22%), Positives = 180/428 (42%), Gaps = 62/428 (14%)

Query: 62  SLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNR----LPDATKLFDEM 117
           SL++C    DL     IH  +++     D+FA + L+   V  +     +  A+++F ++
Sbjct: 23  SLETC---SDLTHLKIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQI 79

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
              N   F   I+G++ S    +A   +    R+G   +   F   +K    +    +  
Sbjct: 80  QNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGS 139

Query: 178 CVFACVYKLGHDSNAFVG-------------------------------TALIDAFSVCG 206
                + K G + + +V                                T++I  F+ CG
Sbjct: 140 QAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCG 199

Query: 207 CVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLK 250
            VE ARK+FD +                 N+ F++A+  F  +++ G + N      V+ 
Sbjct: 200 DVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVIS 259

Query: 251 ACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIP 310
           +C  L  + + + AH   +K    ++L +  AL+D+Y + G I  A  +FE++P++D + 
Sbjct: 260 SCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLS 319

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV 370
           W+ +IA  A    S  +++ F  M +A + P   TF +VL AC+    ++ G QI   + 
Sbjct: 320 WTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMK 379

Query: 371 RVGLLSDVFVSNALM-DVYAKCGRMENSVELFAESP-KRNHVTWNTM-----IVGYVQLG 423
           R   +         M D+  + G++E +     + P K N   W  +     I    ++G
Sbjct: 380 RDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIG 439

Query: 424 E-VGKAMI 430
           E VGK +I
Sbjct: 440 ERVGKILI 447


>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 238/775 (30%), Positives = 399/775 (51%), Gaps = 32/775 (4%)

Query: 60   ATSLQSCIQNDDLQTAMTIHCQVLKKG-NCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
            AT +++C    D      I   V+K G +   +   N L++++   + + +A+++F+ M 
Sbjct: 354  ATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQ 413

Query: 119  ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
            ER+TIS+ + I     + +F E++G F  + R   + +    +A L    S    +    
Sbjct: 414  ERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRG 473

Query: 179  VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDC 222
            +   + K G +SN  V  +L+  ++  G  E A  VF  +                 +  
Sbjct: 474  LHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGK 533

Query: 223  FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
            +  A+    +M       N  TF   L AC  L+ +++    H   +      +L +   
Sbjct: 534  YSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKLKIV---HAFVIHFAVHHNLIIGNT 590

Query: 283  LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
            L+ +Y K G +  A+++ + MP++DV+ W+ +I  +A        ++ F  MR+  +  N
Sbjct: 591  LVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSN 650

Query: 343  QFTFVSVLQACATMEGL-DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
              T V++L  C + + L   G  IH+ +V  G   D +V ++L+ +YA+CG +  S  +F
Sbjct: 651  YITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIF 710

Query: 402  AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
                 +N  TWN +       G   +A+   ++M  + V   + ++S  L    +L  L+
Sbjct: 711  DVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLD 770

Query: 462  PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
             G Q+H   +K  +++D  V NA +DMY KCG I D   +  +    ++ SWN +IS  +
Sbjct: 771  EGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRSWNILISALA 830

Query: 522  MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
             HG   +  + F  M   G +P+++TFV +LSACS+GGL+++G  YF SM + +G+   I
Sbjct: 831  RHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAI 890

Query: 582  EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
            EH   ++ LLGR+G L +A   I+ +P  P+  +WR+LL AC +H N+E+GR +A  + +
Sbjct: 891  EHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLAACKVHGNLELGRKAADRLFE 950

Query: 642  FEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDT 690
                D++ +VL SN+ A  + W            ++  K+P  SWI+ +  V  F  GD 
Sbjct: 951  LNSSDDSAYVLYSNVCASTQRWGDVENVRKQMESQSLKKKPACSWIKLKNKVMTFGMGDQ 1010

Query: 691  SHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKM 750
             H     I   LE L   +R+ G++PD S  L+D  E++KE  LW HSE++ALAF L   
Sbjct: 1011 FHPQSAQIYAKLEELRKMTREEGHMPDTSYALQDTDEEQKEHNLWNHSERIALAFGLINS 1070

Query: 751  PPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
               SP+RI KNLR+C DCH+  K++SKIV R+I++RD +RFHHF  G CSC D+W
Sbjct: 1071 AEGSPLRIFKNLRVCGDCHSVFKLVSKIVGRKIVVRDSYRFHHFHGGKCSCSDYW 1125



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 149/574 (25%), Positives = 267/574 (46%), Gaps = 27/574 (4%)

Query: 73  QTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGY 132
           + A  IH  V+K G   ++F    LL+ Y     + +A KLF+E+ E N +S+ + +  Y
Sbjct: 266 EGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCY 325

Query: 133 TVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNA 192
             +    E + ++  L   G           ++     G   +   +   V K G D+++
Sbjct: 326 ADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSS 385

Query: 193 F-VGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRA 235
             V  +LI  F     VE A +VF+ +                 N  FEE+L  F  MR 
Sbjct: 386 VSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRR 445

Query: 236 VGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISN 295
              K +  T + +L AC     ++  +  HG   K+  E ++ V  +LL +Y ++G   +
Sbjct: 446 THPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSED 505

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACAT 355
           A  +F  MP +D+I W+ M+A + +      A+ L   M +   A N  TF + L AC  
Sbjct: 506 AELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYN 565

Query: 356 MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTM 415
           +E L +   +H+ V+   +  ++ + N L+ +Y K G M+ + ++    P+R+ VTWN +
Sbjct: 566 LEKLKI---VHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNAL 622

Query: 416 IVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA-ALEPGMQVHCLTVKAN 474
           I G+    +    +  F+ M  E + +  +T  ++L  C S    L+ GM +H   V A 
Sbjct: 623 IGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAG 682

Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
           +++D  V ++LI MYA+CG +  +  +FD++ + N  +WNA+ S  + +G   E LK   
Sbjct: 683 FELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIA 742

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY--TSMVSLLG 592
            M+  G   +  +F   L+   N  +L++G+    S +   G E  ++ Y   + + + G
Sbjct: 743 RMRNDGVDLDQFSFSVALATIGNLTVLDEGQQ-LHSWIIKLGFE--LDEYVLNATMDMYG 799

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH 626
           + G +D   +++  IP   S   W  L+ A   H
Sbjct: 800 KCGEIDDVFRILP-IPKIRSKRSWNILISALARH 832



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 139/553 (25%), Positives = 267/553 (48%), Gaps = 26/553 (4%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           + F TN L+N+Y K   +  A  +FD+M +RN  S+   I G+     + +A+  F  + 
Sbjct: 181 NTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQFFCHMF 240

Query: 150 REGHELNPFAFTAFLKVLVSMG-WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCV 208
             G   + +   + +      G   E    +   V K G  SN FVGT+L+  +   G V
Sbjct: 241 ENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSV 300

Query: 209 EFARKVFDGLF----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKAC 252
             A K+F+ +                 N   +E LN +  +R  G      T A V++ C
Sbjct: 301 SEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTC 360

Query: 253 LGLDTIRVAKSAHGCALKTCYEM-DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPW 311
                  +     G  +K+  +   + VA +L+ ++     +  A R+F  M ++D I W
Sbjct: 361 GMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISW 420

Query: 312 SFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR 371
           + +I   A      +++  F  MR+     +  T  ++L AC + + L  G  +H L+ +
Sbjct: 421 NSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITK 480

Query: 372 VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIM 431
            GL S+V V N+L+ +YA+ G  E++  +F   P R+ ++WN+M+  +V+ G+   A+++
Sbjct: 481 SGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILL 540

Query: 432 FSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAK 491
             +ML+ +     VT+++ L AC +L  L+    VH   +      ++++ N L+ MY K
Sbjct: 541 LVEMLKTRKAMNYVTFTTALSACYNLEKLKI---VHAFVIHFAVHHNLIIGNTLVTMYGK 597

Query: 492 CGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGV 551
            G + +A+ V  +M + + V+WNA+I G++        ++ F+LM++ G   N +T V +
Sbjct: 598 FGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNL 657

Query: 552 LSAC-SNGGLLEQG-EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF 609
           L  C S   LL+ G   +   +VA + ++  ++  +S++++  + G L+ ++ + + +  
Sbjct: 658 LGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQ--SSLITMYAQCGDLNTSSYIFDVLAN 715

Query: 610 QPSVMIWRALLGA 622
           + S   W A+  A
Sbjct: 716 KNSS-TWNAIFSA 727



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 99/391 (25%), Positives = 194/391 (49%), Gaps = 9/391 (2%)

Query: 247 FVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK 306
           F+ K    +    V K+ H   +K   + + +    L+++Y+K G I  A+ +F++M  +
Sbjct: 152 FLQKGFSEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDR 211

Query: 307 DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQI 365
           +   W+ MI+ + +      A++ FC M +  V P+ +   S++ AC     +  G  QI
Sbjct: 212 NDASWNNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQI 271

Query: 366 HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEV 425
           H  VV+ GL+S+VFV  +L+  Y   G +  + +LF E  + N V+W +++V Y   G  
Sbjct: 272 HGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHT 331

Query: 426 GKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM-DVVVANA 484
            + + ++  +    +  T  T ++V+R C        G Q+    +K+  D   V VAN+
Sbjct: 332 KEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANS 391

Query: 485 LIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPN 544
           LI M+    S+ +A  VF+ M + + +SWN++I+  + +G   E L  F  M++   + +
Sbjct: 392 LISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTD 451

Query: 545 NLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLI 604
            +T   +L AC +   L+ G      ++   G+E  +    S++S+  +AG  + A  + 
Sbjct: 452 YITISALLPACGSAQHLKWGRG-LHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVF 510

Query: 605 EGIPFQPSVMIWRALLGACIIHNNVEIGRLS 635
             +P +  ++ W +++ +     +VE G+ S
Sbjct: 511 HTMPAR-DLISWNSMMAS-----HVEDGKYS 535


>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
           [Vitis vinifera]
 gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 231/624 (37%), Positives = 343/624 (54%), Gaps = 42/624 (6%)

Query: 224 EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
           E+ L  + +MR  G   + F+F  +LKA   + ++      HG A K  ++ D +V   L
Sbjct: 104 EKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGL 163

Query: 284 LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
           + +Y   G I+ AR +F++M  +DV+ WS MI  Y Q+ L  DA+ LF  M+   V P++
Sbjct: 164 VRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDE 223

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
               +VL AC     L  G  IH  ++   ++ D  + +AL+ +YA CG M+ ++ LF +
Sbjct: 224 MMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEK 283

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ------------------------ 439
              +N V    M+ GY +LG++  A  +F++M+++                         
Sbjct: 284 MTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLF 343

Query: 440 -------VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKC 492
                  +   +VT  SV+ ACA L AL+    +H    K  +   + + NALI+MYAKC
Sbjct: 344 NEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKC 403

Query: 493 GSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL 552
           GS+  AR +FD M   N +SW  MIS ++MHG +   L+ F  M+     PN +TFVGVL
Sbjct: 404 GSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVL 463

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
            ACS+ GL+E+G   F SM+  + I P   HY  MV L GRA  L +A +L+E +P  P+
Sbjct: 464 YACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPN 523

Query: 613 VMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE-------- 664
           V+IW +L+ AC +H  +E+G  +A+ +L+ +P+ +  HV LSNIYA AR WE        
Sbjct: 524 VIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQVRKL 583

Query: 665 ---KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAV 721
              K  SKE G S  E    +H F   D SH   + I   L  +  K +  GY P+  ++
Sbjct: 584 MKHKGISKERGCSRFELNNEIHEFLVADRSHKHADEIYEKLYEVVSKLKLVGYSPNTCSI 643

Query: 722 LRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQR 781
           L D+ E+EK+  +  HSEKLAL + L +    S IRIIKNLR+C DCHT IK+ SK+ +R
Sbjct: 644 LVDLEEEEKKEVVLWHSEKLALCYGLMRDGTGSCIRIIKNLRVCEDCHTFIKLASKVYER 703

Query: 782 EIIIRDVHRFHHFQDGCCSCGDFW 805
           EI++RD  RFHH++DG CSC D+W
Sbjct: 704 EIVVRDRTRFHHYKDGVCSCKDYW 727



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 108/425 (25%), Positives = 190/425 (44%), Gaps = 62/425 (14%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           S+   L++  +   L   + IH    K G   D F    L+ +Y    R+ +A  +FD+M
Sbjct: 124 SFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKM 183

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLH-------------------REG------ 152
             R+ +++   I GY  S  F +A+ LF  +                    R G      
Sbjct: 184 FHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGK 243

Query: 153 --HE--------LNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAF 202
             H+        ++P   +A + +  S G  +L   +F  +       N    TA++  +
Sbjct: 244 MIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTP----KNLVASTAMVTGY 299

Query: 203 SVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRAVGFKPNNFTFA 246
           S  G +E AR VF+ +                 +D  +EALN F++M+++G KP+  T  
Sbjct: 300 SKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTML 359

Query: 247 FVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK 306
            V+ AC  L  +  AK  H    K  +   L +  AL+++Y K G +  ARRIF++MP+K
Sbjct: 360 SVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRK 419

Query: 307 DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI- 365
           +VI W+ MI+ +A    +  A+  F +M    + PN  TFV VL AC+    ++ G +I 
Sbjct: 420 NVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIF 479

Query: 366 HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMIV-----GY 419
           +S++    +         ++D++ +   +  ++EL    P   N + W +++      G 
Sbjct: 480 YSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGE 539

Query: 420 VQLGE 424
           ++LGE
Sbjct: 540 IELGE 544



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 128/266 (48%), Gaps = 7/266 (2%)

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL-LSDVFVSNALMDVYAKCGRMENSVEL 400
           +  T  S L +  ++  L    Q+H+ ++R  L  S   +   ++   A    ++ ++ +
Sbjct: 22  SHHTLFSALSSATSLTHL---KQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSV 78

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F   PK      N  +    +  E  K ++++ +M  + +     ++  +L+A + + +L
Sbjct: 79  FNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSL 138

Query: 461 EPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY 520
             G+++H L  K  +D D  V   L+ MYA CG I +ARL+FD M   + V+W+ MI GY
Sbjct: 139 VEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGY 198

Query: 521 SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFK-SMVANYGIEP 579
              GL  + L +F+ M+     P+ +    VLSAC   G L  G+      M  N  ++P
Sbjct: 199 CQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDP 258

Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIE 605
            ++  +++V++    G +D A  L E
Sbjct: 259 HLQ--SALVTMYASCGSMDLALNLFE 282


>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 614

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 232/599 (38%), Positives = 337/599 (56%), Gaps = 21/599 (3%)

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
           F +AL+ + QM   G +PN FTF F LK+C  L    +    HG   K     + +V   
Sbjct: 21  FLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTG 80

Query: 283 LLDLYTKSGEISNARRIFEE--MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
           L+ +Y K   + NAR++FEE    +K  + ++ +++ Y       DAV LF +M +  V 
Sbjct: 81  LISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVP 140

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
            N  T + ++ AC +   L+LG+ +H   ++ G  SDV V N  + +Y KCG +  + +L
Sbjct: 141 VNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKL 200

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F E P +  ++WN M+ GY Q G     + ++  M    V    VT   VL +CA+L A 
Sbjct: 201 FDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQ 260

Query: 461 EPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY 520
             G +V      + +  +  + NALI+MYA+CG++T A+ VFD M +   VSW A+I GY
Sbjct: 261 SVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGY 320

Query: 521 SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPC 580
            MHG     +++F  M + G  P+   FV VLSACS+ GL +QG  YFK M  NY +EP 
Sbjct: 321 GMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPG 380

Query: 581 IEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHIL 640
            EHY+ MV LLGRAG L +A  LIE +P +P   +W ALLGAC IH NVE+  L+ + ++
Sbjct: 381 PEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVI 440

Query: 641 DFEPEDEATHVLLSNIYAMARS-----------WEKAASKEPGLSWIENQGMVHYFRAGD 689
           + EPE+   +VLLSNIY+ A +            EK   K+PG S++E +G VH F  GD
Sbjct: 441 ELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYVELKGRVHPFIVGD 500

Query: 690 TSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKE---RYLWVHSEKLALAFA 746
            +H   + I  +LE L     +A  + +     +D RE+  +     + VHSEKLA+AF 
Sbjct: 501 RNHLQSDEIYRVLEEL-----EAIIMQEFGKPEKDNREESNKDGFTRVGVHSEKLAVAFG 555

Query: 747 LFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           L      + + IIKNLRIC DCH   K++SKIV R++ +RD  RFHHF++G CSC D+W
Sbjct: 556 LLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDATRFHHFRNGSCSCKDYW 614



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 110/325 (33%), Positives = 185/325 (56%), Gaps = 6/325 (1%)

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
           PW+  +   A+    + A+ L+ +M +    PN FTF   L++CA +    LG+Q H  +
Sbjct: 7   PWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQI 66

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES--PKRNHVTWNTMIVGYVQLGEVGK 427
            +VG + + FV   L+ +Y K   ++N+ ++F E+   ++  V +N ++ GYV   +   
Sbjct: 67  TKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSD 126

Query: 428 AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALID 487
           A+++F +M EE VP   VT   ++ AC S   LE G  +HC T+K  +D DV V N  I 
Sbjct: 127 AVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFIT 186

Query: 488 MYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLT 547
           MY KCGS+  A+ +FD M     +SWNAM+SGY+ +GL+  VL+++  M   G  P+ +T
Sbjct: 187 MYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVT 246

Query: 548 FVGVLSACSNGGLLEQG-EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEG 606
            VGVLS+C+N G    G E  FK   + +   P + +  +++++  R G+L KA  + +G
Sbjct: 247 LVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNN--ALINMYARCGNLTKAQAVFDG 304

Query: 607 IPFQPSVMIWRALLGACIIHNNVEI 631
           +P + +++ W A++G   +H + EI
Sbjct: 305 MP-ERTLVSWTAIIGGYGMHGHGEI 328



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 197/408 (48%), Gaps = 22/408 (5%)

Query: 137 QFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGT 196
           QF++A+ L+  + R G   N F F   LK   ++    L       + K+G     FV T
Sbjct: 20  QFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQT 79

Query: 197 ALIDAFSVCGCVEFARKVFDGLFND-----CFE-------------EALNFFSQMRAVGF 238
            LI  +     V+ ARKVF+  F+      C+              +A+  F QM   G 
Sbjct: 80  GLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGV 139

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
             N+ T   ++ AC+    + +  S H   LK  ++ D+ V    + +Y K G ++ A++
Sbjct: 140 PVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQK 199

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           +F+EMP K +I W+ M++ YAQ  L+ + +EL+  M    V P+  T V VL +CA +  
Sbjct: 200 LFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGA 259

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
             +G+++   +   G  S+ F++NAL+++YA+CG +  +  +F   P+R  V+W  +I G
Sbjct: 260 QSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGG 319

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           Y   G    A+ +F +M+   +      +  VL AC+     + G++   + +K NY ++
Sbjct: 320 YGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKM-MKRNYQLE 378

Query: 479 VVVAN--ALIDMYAKCGSITDARLVFDMMN-DWNEVSWNAMISGYSMH 523
               +   ++D+  + G + +A+ + + M    +   W A++    +H
Sbjct: 379 PGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIH 426



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 95/403 (23%), Positives = 174/403 (43%), Gaps = 20/403 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N+ ++  +L+SC            H Q+ K G   + F    L+++Y K + + +A K+F
Sbjct: 39  NAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVF 98

Query: 115 DE--MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +E     + T+ +   + GY  +S+  +AV LF  ++ EG  +N       +   VS   
Sbjct: 99  EENFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPIN 158

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-----GLF-------- 219
            EL   +     K G DS+  V    I  +  CG V +A+K+FD     GL         
Sbjct: 159 LELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSG 218

Query: 220 ---NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
              N      L  +  M   G  P+  T   VL +C  L    V          + +  +
Sbjct: 219 YAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSN 278

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
            ++  AL+++Y + G ++ A+ +F+ MP++ ++ W+ +I  Y        AV+LF  M +
Sbjct: 279 PFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIR 338

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR-VGLLSDVFVSNALMDVYAKCGRME 395
           + + P+   FV VL AC+     D G +   ++ R   L       + ++D+  + GR++
Sbjct: 339 SGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLK 398

Query: 396 NSVELFAESP-KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
            +  L    P K +   W  ++        V  A + F +++E
Sbjct: 399 EAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIE 441


>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 695

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 236/688 (34%), Positives = 367/688 (53%), Gaps = 70/688 (10%)

Query: 149 HREGHELNP---FAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVC 205
           H E H   P   F     L +    G       +F  + K     + F   AL+ A++  
Sbjct: 47  HMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKMLK----RDIFSWNALLSAYAKS 102

Query: 206 GCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVL 249
           G ++  +  FD +                 N C +E+L  F +M+  GF+P  +T   +L
Sbjct: 103 GSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSIL 162

Query: 250 KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
            A   L  +R  K  HG  +   +  ++++  AL D+Y K GEI  AR +F+ + KK+++
Sbjct: 163 NASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLV 222

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
            W+ MI+ YA+       + L  +MR +   P+Q T  +++ A                 
Sbjct: 223 SWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA----------------- 265

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAM 429
                             Y +CGR++ +  +F+E  +++ V W  M+VGY + G    A+
Sbjct: 266 ------------------YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDAL 307

Query: 430 IMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMY 489
           ++F++ML E +     T SSV+ +CA LA+L  G  VH  ++ A  + +++V++ALIDMY
Sbjct: 308 LLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMY 367

Query: 490 AKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFV 549
           +KCG I DAR VF++M   N VSWNAMI G + +G   + L++F+ M Q+ ++P+N+TF+
Sbjct: 368 SKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFI 427

Query: 550 GVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF 609
           G+LSAC +   +EQG+ YF S+   +G+ P ++HY  MV+LLGR G +++A  LI+ +  
Sbjct: 428 GILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAH 487

Query: 610 QPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS- 668
            P  +IW  LL  C    ++    ++A+H+ + +P     +++LSN+YA    W+  AS 
Sbjct: 488 DPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASV 547

Query: 669 ----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDL 718
                     K  G SWIE    VH F + D +H +   I   L  L  K ++ G+ P+ 
Sbjct: 548 RNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNT 607

Query: 719 SAVLRDVREDEKERYLWVHSEKLALAFALFKMPPS-SPIRIIKNLRICVDCHTAIKIISK 777
           + VL DV EDEK + +  HSEKLALAF L K P   SPIRIIKN+RIC DCH  +K  S+
Sbjct: 608 NLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIKNIRICNDCHEFMKFASR 667

Query: 778 IVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           I+ R+II+RD +RFHHF  G CSC D W
Sbjct: 668 IIGRQIILRDSNRFHHFSTGKCSCNDNW 695



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/479 (26%), Positives = 225/479 (46%), Gaps = 61/479 (12%)

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
           L+ A  +  ++LK+    D+F+ N LL+ Y K   + +    FD MP R+++S+ TTI G
Sbjct: 74  LRDAQNLFDKMLKR----DIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAG 129

Query: 132 YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSN 191
           ++ +S   E++ LF  + REG E   +   + L     +        +   +       N
Sbjct: 130 FSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGN 189

Query: 192 AFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRA 235
            F+  AL D ++ CG +E AR +FD L                 N   E+ +    QMR 
Sbjct: 190 VFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRL 249

Query: 236 VGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISN 295
            G  P+  T + ++ A                                   Y + G +  
Sbjct: 250 SGHMPDQVTMSTIIAA-----------------------------------YCQCGRVDE 274

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACAT 355
           ARR+F E  +KD++ W+ M+  YA+     DA+ LF  M    + P+ +T  SV+ +CA 
Sbjct: 275 ARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAK 334

Query: 356 MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTM 415
           +  L  G  +H   +  GL +++ VS+AL+D+Y+KCG ++++  +F   P RN V+WN M
Sbjct: 335 LASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAM 394

Query: 416 IVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY 475
           IVG  Q G    A+ +F  ML+++     VT+  +L AC     +E G Q +  ++   +
Sbjct: 395 IVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQG-QEYFDSITNQH 453

Query: 476 DMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHG--LSAEV 529
            M   + +   ++++  + G I  A  L+ +M +D + + W+ ++S  S  G  ++AEV
Sbjct: 454 GMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEV 512



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 104/426 (24%), Positives = 190/426 (44%), Gaps = 58/426 (13%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E   ++  + L +  Q  DL+    IH  ++ +    ++F  N L ++Y K   +  A  
Sbjct: 152 EPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARW 211

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           LFD + ++N +S+   I GY  + Q  + +GL   +   GH          +   V+M  
Sbjct: 212 LFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGH----------MPDQVTM-- 259

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------------- 218
                                  + +I A+  CG V+ AR+VF                 
Sbjct: 260 -----------------------STIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVG 296

Query: 219 --FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
              N   E+AL  F++M     +P+++T + V+ +C  L ++   ++ HG ++      +
Sbjct: 297 YAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNN 356

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           L V+ AL+D+Y+K G I +AR +F  MP ++V+ W+ MI   AQ     DA+ELF  M Q
Sbjct: 357 LLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQ 416

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQ-IHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
               P+  TF+ +L AC     ++ G +   S+  + G+   +     ++++  + GR+E
Sbjct: 417 QKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIE 476

Query: 396 NSVEL---FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLR 452
            +V L    A  P  + + W+T++      G++  A +  ++ L E  P   V Y  +  
Sbjct: 477 QAVALIKNMAHDP--DFLIWSTLLSICSTKGDIVNAEVA-ARHLFELDPTIAVPYIMLSN 533

Query: 453 ACASLA 458
             AS+ 
Sbjct: 534 MYASMG 539



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 5/180 (2%)

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQV-PATEVTYSSVLR 452
           +  SV+L           +  +++  V+  E+ +A  + S M      P     ++ +L 
Sbjct: 7   LRQSVDLLCSRSTATSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLH 66

Query: 453 ACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS 512
             A    L     +    +K     D+   NAL+  YAK GSI + +  FD M   + VS
Sbjct: 67  LYAKFGKLRDAQNLFDKMLKR----DIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVS 122

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
           +N  I+G+S +    E L++F  MQ+ G+ P   T V +L+A +    L  G+    S++
Sbjct: 123 YNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSII 182


>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 700

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 234/642 (36%), Positives = 356/642 (55%), Gaps = 32/642 (4%)

Query: 196 TALIDAFSVCGCVEFARKVFDG----------------LFNDCFEEALNFFSQMRAVGFK 239
            +LI+ +  C  +  AR +FD                 L +    E +  F  M +  ++
Sbjct: 59  NSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQ 118

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           PN + F  VL AC     +      HG   K       +V  +L+ +Y+K   +  A ++
Sbjct: 119 PNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQV 178

Query: 300 FEEM-----PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
            E          D   ++ ++    ++    +AVE+  RM    V  +  T+VSV+  C 
Sbjct: 179 LESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCG 238

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
            +  L LG Q+H+ +++ GL  DVFV + L+D++ KCG + ++ ++F     RN V W +
Sbjct: 239 QIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTS 298

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
           ++  Y+Q GE  + + + S M  E   + E T++ +L A A +AAL  G  +H    K  
Sbjct: 299 LMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLG 358

Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
               V+V NALI+MY+KCG I  +  VF  M + + ++WNAMI GYS HGL  + L +F 
Sbjct: 359 IKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQ 418

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
            M   G  PN++TFVGVLSAC++  L+ +G  Y   ++ ++ +EP +EHYT +V++L RA
Sbjct: 419 DMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCRA 478

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLS 654
           G L++A   +     +  V+ WR LL AC IH N  +G   A+ IL  +P D  T+ LLS
Sbjct: 479 GMLEEAENFMRTTQVKWDVVAWRVLLNACNIHRNYNLGTKIAETILQMDPRDMGTYTLLS 538

Query: 655 NIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLE 703
           N+YA ARSW           E+   KEPG+SWIE +  VH F +  ++H +   I   ++
Sbjct: 539 NMYAKARSWDSVTMIRKMMRERNVKKEPGVSWIEIRNAVHVFSSDGSNHPECIQIYNKVQ 598

Query: 704 WLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLR 763
            L    ++ GY+P++ AVL DV +++KE YL  HSEKLA+A+ L K+P  +PIR+IKNLR
Sbjct: 599 LLLEMIKQLGYVPNIEAVLHDVEDEQKESYLNYHSEKLAIAYGLMKIPSPAPIRVIKNLR 658

Query: 764 ICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           IC DCHTA+K+ISK+  R II+RD  RFHHF+DG C+C D W
Sbjct: 659 ICEDCHTAVKLISKVTNRLIIVRDASRFHHFRDGTCTCTDHW 700



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 205/422 (48%), Gaps = 29/422 (6%)

Query: 71  DLQTAMTIHCQVLKKGNC--------LDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           +L    +IH Q+L +            ++   N L+N+YVK ++L  A  LFDEM  R+ 
Sbjct: 27  NLNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMSLRSV 86

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +S+   + GY  S + +E V LF  +    ++ N + FT  L      G           
Sbjct: 87  VSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGF 146

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------NDCF------------- 223
           ++K G   + FV ++L+  +S C  V+ A +V +         ND F             
Sbjct: 147 LFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNALVESG 206

Query: 224 --EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
              EA+    +M   G   ++ T+  V+  C  +  + +    H   LK     D++V  
Sbjct: 207 RLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGS 266

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
            L+D++ K G++ +AR++F+ +  ++V+ W+ ++  Y Q     + + L   M +     
Sbjct: 267 MLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMS 326

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           N+FTF  +L A A M  L  G+ +H+ V ++G+ + V V NAL+++Y+KCG +++S ++F
Sbjct: 327 NEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVF 386

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
            +   R+ +TWN MI GY Q G   +A+++F  ML        VT+  VL ACA LA + 
Sbjct: 387 FDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVN 446

Query: 462 PG 463
            G
Sbjct: 447 EG 448



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 103/218 (47%), Gaps = 16/218 (7%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
           ++S +Y + +  C Q  DL   + +H Q+LK G   D+F  ++L++++ K   +  A K+
Sbjct: 225 WDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKV 284

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           FD +  RN + + + +  Y  + +F E + L S + REG   N F F   L     M   
Sbjct: 285 FDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAAL 344

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF---------- 223
                + A V KLG  +   VG ALI+ +S CGC++ +  VF  + N             
Sbjct: 345 RHGDLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGY 404

Query: 224 ------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGL 255
                 ++AL  F  M + G  PN+ TF  VL AC  L
Sbjct: 405 SQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHL 442


>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 620

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 226/600 (37%), Positives = 342/600 (57%), Gaps = 19/600 (3%)

Query: 219 FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
           +   F E+++ +  M   G  P+ F+F F+LK+C  L      +  H   ++   E + +
Sbjct: 27  YQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVIRGGCEAEPF 86

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIP--WSFMIARYAQTDLSIDAVELFCRMRQ 336
           V  AL+ +Y K G + +AR++FEE P    +   ++ +I+ Y       DA  +F RM++
Sbjct: 87  VLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSDAAFMFRRMKE 146

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             V+ +  T + ++  C   E L LG  +H   V+ G  S+V V N+ + +Y KCG +E+
Sbjct: 147 TGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFITMYMKCGSVES 206

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
              LF E P +  +TWN +I GY Q G     + +F +M    V     T  SVL +CA 
Sbjct: 207 GRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVLSSCAH 266

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           L A + G +V  L     +  +V ++NALI MYA+CG++  AR VFD+M   + VSW AM
Sbjct: 267 LGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMPVKSLVSWTAM 326

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           I  Y MHG+    L +FD M +RG RP+   FV VLSACS+ GL ++G   F++M   Y 
Sbjct: 327 IGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYK 386

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
           +EP  EHY+ +V LLGRAG LD+A + I+ +P +P   +W ALLGAC IH NV++  L+ 
Sbjct: 387 LEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKIHKNVDMAELAF 446

Query: 637 QHILDFEPEDEATHVLLSNIYAMARS----W-------EKAASKEPGLSWIENQGMVHYF 685
             +++FEP +   +VL+SNIY+ +++    W       E+A  K+PG S++E++G VH F
Sbjct: 447 AKVIEFEPMNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGKVHLF 506

Query: 686 RAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAF 745
            AGD SH     +  ML+ L         + +L+  +   R +E       HSE+LA+AF
Sbjct: 507 LAGDRSHEQTEEVHRMLDELETS------VMELAGNMDCDRGEEVSSTTREHSERLAIAF 560

Query: 746 ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            +    P + I +IKNLR+C DCH  IK++SKIV R  ++RD  RFH+F+DG CSC D+W
Sbjct: 561 GILNSIPGTEILVIKNLRVCEDCHVFIKLVSKIVDRRFVVRDASRFHYFKDGVCSCKDYW 620



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 178/324 (54%), Gaps = 4/324 (1%)

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV 370
           W+  +   A   L  +++ L+  M ++  +P+ F+F  +L++CA++     G Q+H  V+
Sbjct: 18  WNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVI 77

Query: 371 RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNH--VTWNTMIVGYVQLGEVGKA 428
           R G  ++ FV  AL+ +Y KCG +E++ ++F E+P  +   V +N +I GY    +V  A
Sbjct: 78  RGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSDA 137

Query: 429 MIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDM 488
             MF +M E  V    VT   ++  C     L  G  +H   VK     +V V N+ I M
Sbjct: 138 AFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFITM 197

Query: 489 YAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTF 548
           Y KCGS+   R +FD M     ++WNA+ISGYS +GL+ +VL++F+ M+  G  P+  T 
Sbjct: 198 YMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTL 257

Query: 549 VGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIP 608
           V VLS+C++ G  + G+   + + AN G  P +    +++S+  R G+L KA  + + +P
Sbjct: 258 VSVLSSCAHLGAKKIGQEVGELVEAN-GFAPNVFLSNALISMYARCGNLAKARAVFDIMP 316

Query: 609 FQPSVMIWRALLGACIIHNNVEIG 632
            + S++ W A++G   +H   E G
Sbjct: 317 VK-SLVSWTAMIGCYGMHGMGETG 339



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/436 (23%), Positives = 189/436 (43%), Gaps = 23/436 (5%)

Query: 22  NAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQ 81
           N  LR L+ Q+  +    S S    +  S S  ++ S+   L+SC       +   +HC 
Sbjct: 19  NVRLRELAYQSLFTE---SISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCH 75

Query: 82  VLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTIS--FVTTIQGYTVSSQFV 139
           V++ G   + F    L+++Y K   + DA K+F+E P  + +   +   I GYT +S+  
Sbjct: 76  VIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVS 135

Query: 140 EAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALI 199
           +A  +F  +   G  ++       + +     +  L   +     K G  S   V  + I
Sbjct: 136 DAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFI 195

Query: 200 DAFSVCGCVEFARKVFD-----GLF-----------NDCFEEALNFFSQMRAVGFKPNNF 243
             +  CG VE  R++FD     GL            N    + L  F QM++ G  P+ F
Sbjct: 196 TMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPF 255

Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
           T   VL +C  L   ++ +          +  +++++ AL+ +Y + G ++ AR +F+ M
Sbjct: 256 TLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIM 315

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
           P K ++ W+ MI  Y    +    + LF  M +  + P+   FV VL AC+     D G 
Sbjct: 316 PVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGL 375

Query: 364 QIHSLVVR-VGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMIVGYVQ 421
           ++   + R   L       + L+D+  + GR++ ++E     P + +   W  ++     
Sbjct: 376 ELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKI 435

Query: 422 LGEVGKAMIMFSKMLE 437
              V  A + F+K++E
Sbjct: 436 HKNVDMAELAFAKVIE 451


>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 693

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 253/751 (33%), Positives = 381/751 (50%), Gaps = 108/751 (14%)

Query: 67  IQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFV 126
           IQ   LQ+ M ++    K     D F  N LL++Y K  +L DA  +FD M +R+  S+ 
Sbjct: 39  IQAKRLQSHMELNLFQPK-----DSFIHNQLLHLYAKFGKLSDAQNVFDNMTKRDVYSWN 93

Query: 127 TTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKL 186
           T +  Y         +G+   LH    ++ P+  +     L+            AC    
Sbjct: 94  TLLSAYA-------KMGMVENLHVVFDQM-PYRDSVSYNTLI------------ACFASN 133

Query: 187 GHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFA 246
           GH                                    +AL    +M+  GF+P  ++  
Sbjct: 134 GHSG----------------------------------KALKVLVRMQEDGFQPTQYSHV 159

Query: 247 FVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK 306
             L+AC  L  +R  K  HG  +      + +V  A+ D+Y K G+I  AR +F+ M  K
Sbjct: 160 NALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDK 219

Query: 307 DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIH 366
           +V+ W+ MI+ Y +     + + LF  M+ + + P+  T  +VL A              
Sbjct: 220 NVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNA-------------- 265

Query: 367 SLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVG 426
                                Y +CGR++++  LF + PK++ + W TMIVGY Q G   
Sbjct: 266 ---------------------YFRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGREE 304

Query: 427 KAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALI 486
            A ++F  ML   V     T SS++ +CA LA+L  G  VH   V    D  ++V++AL+
Sbjct: 305 DAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALV 364

Query: 487 DMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNL 546
           DMY KCG   DAR++F+ M   N ++WNAMI GY+ +G   E L +++ MQQ  ++P+N+
Sbjct: 365 DMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNI 424

Query: 547 TFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEG 606
           TFVGVLSAC N  ++++G+ YF S ++ +GI P ++HY  M++LLGR+G +DKA  LI+G
Sbjct: 425 TFVGVLSACINADMVKEGQKYFDS-ISEHGIAPTLDHYACMITLLGRSGSVDKAVDLIQG 483

Query: 607 IPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW--- 663
           +P +P+  IW  LL  C    +++   L+A H+ + +P +   +++LSN+YA    W   
Sbjct: 484 MPHEPNYRIWSTLLSVC-AKGDLKNAELAASHLFELDPRNAGPYIMLSNLYAACGRWKDV 542

Query: 664 --------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYI 715
                   EK A K    SW+E    VH F + D  H ++  I G L  L    ++ GY 
Sbjct: 543 AVVRSLMKEKNAKKFAAYSWVEVGNKVHRFVSEDHYHPEVGKIYGELNRLISILQQIGYN 602

Query: 716 PDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPS-SPIRIIKNLRICVDCHTAIKI 774
           PD + VL +V E+EK R +  HSEKLALAFAL + P   +PIRIIKN+R+C DCH  +K 
Sbjct: 603 PDTNIVLHNVGEEEKFRSISYHSEKLALAFALIRKPNGVAPIRIIKNIRVCDDCHVFMKF 662

Query: 775 ISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            S  + R II+RD +RFHHF  G CSC D W
Sbjct: 663 ASITISRPIIMRDSNRFHHFFGGKCSCNDNW 693



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 94/377 (24%), Positives = 166/377 (44%), Gaps = 52/377 (13%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
           +S+  +LQ+C Q  DL+    IH +++      + F  N + ++Y K   +  A  LFD 
Sbjct: 156 YSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDG 215

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
           M ++N +S+   I GY       E + LF+ +   G  L P   T               
Sbjct: 216 MIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSG--LKPDLVTV-------------- 259

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FN 220
                              + +++A+  CG V+ AR +F  L                 N
Sbjct: 260 -------------------SNVLNAYFRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQN 300

Query: 221 DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
              E+A   F  M     KP+++T + ++ +C  L ++   +  HG  +    +  + V+
Sbjct: 301 GREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVS 360

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
            AL+D+Y K G   +AR IFE MP ++VI W+ MI  YAQ    ++A+ L+ RM+Q    
Sbjct: 361 SALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFK 420

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           P+  TFV VL AC   + +  G +    +   G+   +     ++ +  + G ++ +V+L
Sbjct: 421 PDNITFVGVLSACINADMVKEGQKYFDSISEHGIAPTLDHYACMITLLGRSGSVDKAVDL 480

Query: 401 FAESPKR-NHVTWNTMI 416
               P   N+  W+T++
Sbjct: 481 IQGMPHEPNYRIWSTLL 497



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 58/115 (50%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +S++ ++ + SC +   L     +H +V+  G    +  ++ L+++Y K     DA  +F
Sbjct: 321 DSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIF 380

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           + MP RN I++   I GY  + Q +EA+ L+  + +E  + +   F   L   ++
Sbjct: 381 ETMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACIN 435


>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Vitis vinifera]
          Length = 631

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 240/609 (39%), Positives = 343/609 (56%), Gaps = 60/609 (9%)

Query: 257 TIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG--EISNARRIFEEMPKKDVIPWSFM 314
           T++  K  H   +KT    D   A  LL     S   ++  AR+IF  M + +   ++ +
Sbjct: 23  TMQDLKQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYNTL 82

Query: 315 IARYAQTDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
           I   ++++   DA+ +F  M     V PN FTF SV +AC   E L  G Q+H L V+ G
Sbjct: 83  IRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKFG 142

Query: 374 LLSDVFVS----------------------------------------------NALMDV 387
           L SD FV                                               N ++D 
Sbjct: 143 LDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMIDG 202

Query: 388 YAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTY 447
           Y + G +E +  LF E P+R+ V+WN MI GY Q G   +A+ +F +M   +VP   VT 
Sbjct: 203 YVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTL 262

Query: 448 SSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND 507
            SVL A + L ALE G  VH   V+ N  +D V+ +ALIDMYAKCGSI  A  VF+ +  
Sbjct: 263 VSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPK 322

Query: 508 WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAY 567
            N V+W+ +I+G +MHG + + L  F+ M++ G  P+++T++G+LSACS+ GL+ +G  +
Sbjct: 323 RNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGRWF 382

Query: 568 FKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
           F  MV   G+EP IEHY  MV LLGRAG L+++ +LI  +P +P  +IW+ALLGAC +H 
Sbjct: 383 FDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMHG 442

Query: 628 NVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWI 676
           NVE+G+  A+H+++  P D  ++V LSNIYA   +WE  A            K+PG SWI
Sbjct: 443 NVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVRKDPGCSWI 502

Query: 677 ENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWV 736
           E  G++H F   D SH     I  ML+ ++      GY P+ + VL ++ E++KE  L  
Sbjct: 503 ELDGVIHEFLVEDDSHPKSKKIHSMLQEMSRNLILVGYRPNTTQVLTNMDEEDKESSLNY 562

Query: 737 HSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQD 796
           HSEK+A+AF L    P +P+RI KNLRIC DCH++IK+ISKI +R+II+RD  RFHHF +
Sbjct: 563 HSEKIAIAFGLISTQPQTPLRITKNLRICEDCHSSIKLISKIYKRKIIVRDRKRFHHFVN 622

Query: 797 GCCSCGDFW 805
           G CSC D+W
Sbjct: 623 GSCSCMDYW 631



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 108/427 (25%), Positives = 184/427 (43%), Gaps = 43/427 (10%)

Query: 71  DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPER-----NTISF 125
           DL  A  I  + + + NC   F+ N L+    + N   DA  +F EM E      N  +F
Sbjct: 60  DLDYARKIF-RSMHRPNC---FSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTF 115

Query: 126 VTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVF----- 180
            +  +    + +  E   +     + G + + F  +  +++ +S G  E    +F     
Sbjct: 116 PSVFKACGRAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVF 175

Query: 181 --ACV----YKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDC------------ 222
              C      K   D +  +   +ID +   G +E AR +FD +                
Sbjct: 176 VDGCDGIRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYA 235

Query: 223 ----FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
               F+EA+  F +M+     PN  T   VL A   L  + + K  H  A++    +D  
Sbjct: 236 QSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDV 295

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           +  AL+D+Y K G I  A ++FE +PK++V+ WS +IA  A    + D ++ F  M +A 
Sbjct: 296 LGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAG 355

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV-GLLSDVFVSNALMDVYAKCGRMENS 397
           V P+  T++ +L AC+    ++ G      +VRV GL   +     ++D+  + G +E S
Sbjct: 356 VMPSDVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEES 415

Query: 398 VELFAESP-KRNHVTWNTMIVGYVQLG--EVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
            EL    P K + V W  ++      G  E+GK +   ++ L E  P    +Y ++    
Sbjct: 416 EELILNMPIKPDDVIWKALLGACKMHGNVEMGKRV---AEHLMELAPHDSGSYVALSNIY 472

Query: 455 ASLAALE 461
           ASL   E
Sbjct: 473 ASLGNWE 479


>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
 gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
          Length = 808

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 218/565 (38%), Positives = 327/565 (57%), Gaps = 46/565 (8%)

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y + G+++ AR +FEE+  K  + W+ MI+ Y Q+ +  DA ELF RM    V  ++FTF
Sbjct: 244 YVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTF 303

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGL----LSDVFVSNALMDVYAKCGRMENSVELFA 402
            SVL ACA       G  +H  ++R+       + + V+NAL+ +Y+K G++  +  +F 
Sbjct: 304 TSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFD 363

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKA---------------MIM---------------- 431
               ++ V+WNT++ GY+  G + KA               M+M                
Sbjct: 364 TMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKL 423

Query: 432 FSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAK 491
           F++M  E V   + TY+  + AC  L AL+ G Q+H   V+  ++      NAL+ MYAK
Sbjct: 424 FNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAK 483

Query: 492 CGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGV 551
           CG++ DARLVF +M + + VSWNAMIS    HG   E L++FD M   G  P+ ++F+ +
Sbjct: 484 CGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTI 543

Query: 552 LSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQP 611
           L+AC++ GL+++G  YF+SM  ++GI P  +HY  ++ LLGR+G + +A  LI+ +PF+P
Sbjct: 544 LTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEP 603

Query: 612 SVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA---- 667
           +  IW A+L  C  + ++E G  +A  +    P+ + T++LLSN Y+ A  W  AA    
Sbjct: 604 TPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRK 663

Query: 668 -------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSA 720
                   KEPG SWIE    +H F  GDT H +   +   LE +  + RK GY+PD   
Sbjct: 664 LMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKF 723

Query: 721 VLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQ 780
           VL D+   EKE  L+ HSEKLA+ F L K+PP + + ++KNLRIC DCHTA+  +SK V 
Sbjct: 724 VLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPGATVTVLKNLRICGDCHTAMMFMSKAVG 783

Query: 781 REIIIRDVHRFHHFQDGCCSCGDFW 805
           REI++RDV RFHHF+DG CSCG++W
Sbjct: 784 REIVVRDVRRFHHFKDGECSCGNYW 808



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 188/367 (51%), Gaps = 48/367 (13%)

Query: 280 AVALLDLYTKSGEISNARRIFEEMP--KKDVIPWSFMIARYAQTDLSIDAVELF-CRMRQ 336
           A +L+  +  +G + +A   F+ +P  ++D +  + M++ +A+  L+  AV +F   +  
Sbjct: 97  ATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGS 156

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGN--QIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
             + P+ ++F +++ A   M  L   +  Q+H  V++ G  + + VSNAL+ +Y KC   
Sbjct: 157 GSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTP 216

Query: 395 E---NSVELFAESPKRNHVTWNTMIVGYVQLGEV-----------GK------AMI---- 430
           E   ++ ++  E P ++ +TW TM+VGYV+ G+V           GK      AMI    
Sbjct: 217 EASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYV 276

Query: 431 ----------MFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVH--CLTVKANY--D 476
                     +F +M+ E+VP  E T++SVL ACA+      G  VH   + ++ N+  +
Sbjct: 277 QSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPE 336

Query: 477 MDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLM 536
             + V NAL+ +Y+K G I  A+ +FD MN  + VSWN ++SGY   G   + ++VF +M
Sbjct: 337 AALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVM 396

Query: 537 QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGH 596
             +    N+L+++ ++S   +GGL E     F  M A   ++PC   Y   ++  G  G 
Sbjct: 397 PYK----NDLSWMVMVSGYVHGGLSEDALKLFNQMRAE-DVKPCDYTYAGAIAACGELGA 451

Query: 597 LDKAAKL 603
           L    +L
Sbjct: 452 LKHGRQL 458



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 136/526 (25%), Positives = 217/526 (41%), Gaps = 96/526 (18%)

Query: 93  ATNVLLNVYVKLNRLPDATKLFDEMP--ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHR 150
           A   L+  +    RL DA   FD +P   R+T+     +  +  +S    AV +F  L  
Sbjct: 96  AATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLG 155

Query: 151 EGHELNP--FAFTAFLKVLVSMG--WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVC- 205
            G  L P  ++FTA +  +  M    A  C  +   V K G  +   V  ALI  +  C 
Sbjct: 156 SG-SLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCD 214

Query: 206 ---------------------------------GCVEFARKVF---DGLFNDCFE----- 224
                                            G V  AR VF   DG F+  +      
Sbjct: 215 TPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISG 274

Query: 225 --------EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT----C 272
                   +A   F +M +     + FTF  VL AC         KS HG  ++      
Sbjct: 275 YVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFV 334

Query: 273 YEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWS-------------------- 312
            E  L V  AL+ LY+K G+I  A+RIF+ M  KDV+ W+                    
Sbjct: 335 PEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFK 394

Query: 313 -----------FMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL 361
                       M++ Y    LS DA++LF +MR   V P  +T+   + AC  +  L  
Sbjct: 395 VMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKH 454

Query: 362 GNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQ 421
           G Q+H+ +V+ G  +     NAL+ +YAKCG + ++  +F   P  + V+WN MI    Q
Sbjct: 455 GRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQ 514

Query: 422 LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVV 481
            G   +A+ +F +M+ E +    +++ ++L AC     ++ G   +  ++K ++ +    
Sbjct: 515 HGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFH-YFESMKRDFGISPGE 573

Query: 482 AN--ALIDMYAKCGSITDAR-LVFDMMNDWNEVSWNAMISGYSMHG 524
            +   LID+  + G I +AR L+  M  +     W A++SG   +G
Sbjct: 574 DHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNG 619



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 125/571 (21%), Positives = 220/571 (38%), Gaps = 139/571 (24%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLP---DATKLFDEMPERNTISFVTT------ 128
           +HC VLK G    L  +N L+ +Y+K +      DA K+ DEMP+++ +++ T       
Sbjct: 187 LHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVR 246

Query: 129 -------------------------IQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAF 163
                                    I GY  S    +A  LF  +  E   L+ F FT+ 
Sbjct: 247 RGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSV 306

Query: 164 LKVLVSMGWAELCPCVFACVYKLGH----DSNAFVGTALIDAFSVCGCVEFARKVFDGLF 219
           L    + G+      V   + +L      ++   V  AL+  +S  G +  A+++FD + 
Sbjct: 307 LSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMN 366

Query: 220 ----------------NDCF-------------------------------EEALNFFSQ 232
                           + C                                E+AL  F+Q
Sbjct: 367 LKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQ 426

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           MRA   KP ++T+A  + AC  L  ++  +  H   ++  +E       ALL +Y K G 
Sbjct: 427 MRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGA 486

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           +++AR +F  MP  D + W+ MI+   Q     +A+ELF +M    + P++ +F+++L A
Sbjct: 487 VNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTA 546

Query: 353 CATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTW 412
           C                   GL+ + F               E+    F  SP  +H   
Sbjct: 547 CN----------------HAGLVDEGF------------HYFESMKRDFGISPGEDHYAR 578

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV--HCLT 470
              ++G  + G +G+A  +   M  E  P+    + ++L  C +   +E G         
Sbjct: 579 LIDLLG--RSGRIGEARDLIKTMPFEPTPS---IWEAILSGCRTNGDMEFGAYAADQLFR 633

Query: 471 VKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND----------WNEVS--WNAMIS 518
           +   +D   ++   L + Y+  G   DA  V  +M D          W EV    +  + 
Sbjct: 634 MIPQHDGTYIL---LSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLV 690

Query: 519 GYSMHGLSAEVLKVFDL----MQQRGWRPNN 545
           G + H  + EV +  ++    M++ G+ P+ 
Sbjct: 691 GDTKHPEAQEVYQFLEVIGARMRKLGYVPDT 721



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 124/286 (43%), Gaps = 43/286 (15%)

Query: 381 SNALMDVYAKCGRMENSVELFAESP--KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE 438
           + +L+  +A  GR+ ++   F   P  +R+ V  N M+  + +      A+ +F  +L  
Sbjct: 97  ATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGS 156

Query: 439 -QVPATEVTYSSVLRACASLAALEPG--MQVHCLTVKANYDMDVVVANALIDMYAKCGSI 495
             +   + ++++++ A   +  L      Q+HC  +K+     + V+NALI +Y KC + 
Sbjct: 157 GSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTP 216

Query: 496 T---DARLVFDMMND-----WN--------------------------EVSWNAMISGYS 521
               DAR V D M D     W                           +V WNAMISGY 
Sbjct: 217 EASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYV 276

Query: 522 MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV---ANYGIE 578
             G+ A+  ++F  M       +  TF  VLSAC+N G    G++    ++    N+  E
Sbjct: 277 QSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPE 336

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACI 624
             +    ++V+L  + G +  A ++ + +  +  V+ W  +L   I
Sbjct: 337 AALPVNNALVTLYSKGGKIVIAKRIFDTMNLK-DVVSWNTILSGYI 381



 Score = 41.2 bits (95), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 27/108 (25%), Positives = 50/108 (46%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
           ++YA ++ +C +   L+    +H  +++ G      A N LL +Y K   + DA  +F  
Sbjct: 437 YTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLV 496

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFL 164
           MP  +++S+   I          EA+ LF  +  EG + +  +F   L
Sbjct: 497 MPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTIL 544


>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
 gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
          Length = 908

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 256/779 (32%), Positives = 405/779 (51%), Gaps = 28/779 (3%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N ++ ++ + +C+  ++      +   V+K G   ++   N L++++     + +A  +F
Sbjct: 130 NDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFGSVEEACYVF 189

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             M E +TIS+ + I  Y  +    E++  FS + R   E+N    +  L    S+   +
Sbjct: 190 SGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLAGCGSVDNLK 249

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND----------CFE 224
               + + V K G +SN      LI  +S  G  E A  VF G+             C+ 
Sbjct: 250 WGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMISWNSMMACYA 309

Query: 225 E------ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
           +      AL   + M  +    N  TF   L AC   +     K  H   +      ++ 
Sbjct: 310 QDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALVIHVGLHENVI 369

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V  AL+ LY KSG +  A+++F+ MPK+D + W+ +I  +A ++   +A++ F  MR+  
Sbjct: 370 VGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALKAFKLMREEG 429

Query: 339 VAPNQFTFVSVLQAC-ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
           V  N  T  +VL AC A  + L+ G  IH+ ++  G  SD +V N+L+ +YAKCG + +S
Sbjct: 430 VPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLITMYAKCGDLNSS 489

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
             +F     +N   WN M+      G + +A+    +M    V   E ++S  L A A L
Sbjct: 490 NNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSFSECLAAAAKL 549

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
           A LE G Q+H L VK   D +  VA+A +DMY KCG I D   +     + + +SWN + 
Sbjct: 550 AILEEGQQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRIIPRPINRSRLSWNILT 609

Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
           S +S HG   +  + F  M   G +P+++TFV +LSACS+GG++E+G AY+ SM+  +GI
Sbjct: 610 SSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSHGGMVEEGLAYYDSMIKEFGI 669

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQ 637
              I H   ++ LLGR+G   +A   I+ +P  P+  +WR+LL AC  H N+E+GR + +
Sbjct: 670 PAKIGHCVCIIDLLGRSGRFAEAETFIKEMPVSPTDHVWRSLLAACKTHGNLELGRKAVE 729

Query: 638 HILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFR 686
           ++L  +P D++ +VL SNI A    WE               K+P  SW++ +  +  F 
Sbjct: 730 NLLKLDPSDDSAYVLYSNICATTGKWEDVEKIRRQMGLNKIKKKPACSWVKLKNKLSLFG 789

Query: 687 AGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFA 746
            GD SH   + I   LE L    ++AGYIPD+S  L+D  E++KE  LW HSE+LALA+ 
Sbjct: 790 MGDHSHPQASEIYAKLEELKKMIKEAGYIPDISYALQDTDEEQKEHNLWNHSERLALAYG 849

Query: 747 LFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           L   P  S ++I KNLR+C DCH+  K  S I+ R+I++RD +RFH F  G CSC D+W
Sbjct: 850 LISSPEGSTLKIFKNLRVCGDCHSVYKFASGILGRKIVLRDPYRFHQFSGGQCSCTDYW 908



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 170/588 (28%), Positives = 279/588 (47%), Gaps = 19/588 (3%)

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
           L   + +H  ++K G   D+F    L+++Y       DA K+F EM  +N +S+   +  
Sbjct: 46  LIEGVQVHGFIVKVGLLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVA 105

Query: 132 YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSN 191
           Y    +    + ++  +  EG   N    ++ +   VS+    L   V   V K G ++N
Sbjct: 106 YVDYGEPSMVMNIYRRMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETN 165

Query: 192 AFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRA 235
             V  +LI  F   G VE A  VF G+                 N   +E+L  FS M  
Sbjct: 166 VSVANSLISMFGYFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFR 225

Query: 236 VGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISN 295
           V  + N+ T + +L  C  +D ++  +  H   LK  +  ++  +  L+ +Y+ +G   +
Sbjct: 226 VHKEINSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCED 285

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACAT 355
           A  +F+ M +KD+I W+ M+A YAQ    +DA++L   M       N  TF S L AC+ 
Sbjct: 286 AELVFQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSD 345

Query: 356 MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTM 415
            E    G  +H+LV+ VGL  +V V NAL+ +YAK G M  + ++F   PKR+ VTWN +
Sbjct: 346 PEFATEGKILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNAL 405

Query: 416 IVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC-ASLAALEPGMQVHCLTVKAN 474
           I G+    E  +A+  F  M EE VP   +T S+VL AC A    LE GM +H   +   
Sbjct: 406 IGGHADSEEPDEALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTG 465

Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
           +  D  V N+LI MYAKCG +  +  +FD +   N  +WNAM++  + HG   E LK   
Sbjct: 466 FQSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLL 525

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
            M++ G   +  +F   L+A +   +LE+G+     +    G +      ++ + + G+ 
Sbjct: 526 EMRRAGVNVDEFSFSECLAAAAKLAILEEGQQ-LHGLAVKLGCDSNPFVASATMDMYGKC 584

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDF 642
           G +D   ++I   P   S + W  L  +   H   E  + +   +++ 
Sbjct: 585 GEIDDVLRIIPR-PINRSRLSWNILTSSFSRHGFFEKAKETFHEMINL 631



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 127/454 (27%), Positives = 221/454 (48%), Gaps = 18/454 (3%)

Query: 129 IQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC-VFACVYKLG 187
           + G+  +  + E++  F+ +   G + +  A  + +       W  +    V   + K+G
Sbjct: 1   MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVG 60

Query: 188 HDSNAFVGTALIDAFSVCGCVEFARKVFDGL--------------FNDCFEEAL--NFFS 231
             S+ FVGT+L+  +   G    A KVF  +              + D  E ++  N + 
Sbjct: 61  LLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYR 120

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
           +MR+ G   N+ T + V+  C+ L+   +     G  +K   E ++ VA +L+ ++   G
Sbjct: 121 RMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFG 180

Query: 292 EISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQ 351
            +  A  +F  M + D I W+ MIA Y +  L  +++  F  M +     N  T  ++L 
Sbjct: 181 SVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLA 240

Query: 352 ACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
            C +++ L  G  IHSLV++ G  S+V  SN L+ +Y+  GR E++  +F    +++ ++
Sbjct: 241 GCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMIS 300

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
           WN+M+  Y Q G    A+ + + M   +  A  VT++S L AC+       G  +H L +
Sbjct: 301 WNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALVI 360

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
                 +V+V NAL+ +YAK G + +A+ VF  M   + V+WNA+I G++      E LK
Sbjct: 361 HVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALK 420

Query: 532 VFDLMQQRGWRPNNLTFVGVLSAC-SNGGLLEQG 564
            F LM++ G   N +T   VL AC +   LLE G
Sbjct: 421 AFKLMREEGVPINYITISNVLGACLAPNDLLEHG 454



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 134/492 (27%), Positives = 235/492 (47%), Gaps = 21/492 (4%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E NS + +T L  C   D+L+    IH  VLK G   ++ A+N L+ +Y    R  DA  
Sbjct: 229 EINSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAEL 288

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +F  M E++ IS+ + +  Y      ++A+ L +T+       N   FT+ L       +
Sbjct: 289 VFQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEF 348

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF------DGLFNDCF--- 223
           A     + A V  +G   N  VG AL+  ++  G +  A+KVF      DG+  +     
Sbjct: 349 ATEGKILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGG 408

Query: 224 -------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGL-DTIRVAKSAHGCALKTCYEM 275
                  +EAL  F  MR  G   N  T + VL ACL   D +      H   + T ++ 
Sbjct: 409 HADSEEPDEALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQS 468

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
           D YV  +L+ +Y K G+++++  IF+ +  K+   W+ M+A  A      +A++    MR
Sbjct: 469 DEYVQNSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMR 528

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
           +A V  ++F+F   L A A +  L+ G Q+H L V++G  S+ FV++A MD+Y KCG ++
Sbjct: 529 RAGVNVDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASATMDMYGKCGEID 588

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
           + + +      R+ ++WN +   + + G   KA   F +M+   V    VT+ S+L AC+
Sbjct: 589 DVLRIIPRPINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACS 648

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDAR-LVFDMMNDWNEVS 512
               +E G+  +   +K  + +   + +   +ID+  + G   +A   + +M     +  
Sbjct: 649 HGGMVEEGLAYYDSMIK-EFGIPAKIGHCVCIIDLLGRSGRFAEAETFIKEMPVSPTDHV 707

Query: 513 WNAMISGYSMHG 524
           W ++++    HG
Sbjct: 708 WRSLLAACKTHG 719


>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Vitis vinifera]
          Length = 729

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 260/741 (35%), Positives = 401/741 (54%), Gaps = 44/741 (5%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL-FDEMPERNTISFVTTIQGYTVSS 136
           +H Q++        +   +L+N   +L   P  T L F+     N   F + ++ Y+   
Sbjct: 20  LHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPNVFVFTSMLRFYSHLQ 79

Query: 137 QFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGT 196
              + V ++  +   G   + F +   +K   + G         A V KLGH S+AFV  
Sbjct: 80  DHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGTGGIG-----FHAHVLKLGHGSDAFVRN 134

Query: 197 ALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLD 256
           A+ID ++  G +  ARKVFD + +  +E  +  ++ M +  +K  +   A  L       
Sbjct: 135 AVIDMYARLGPIGHARKVFDEIPD--YERKVADWNAMVSGYWKWESEGQAQWL------- 185

Query: 257 TIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIA 316
                            E ++    A++  Y K  ++  ARR F+ MP++ V+ W+ M++
Sbjct: 186 ------------FDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLS 233

Query: 317 RYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLS 376
            YAQ  L+ +A+ LF  M  A + P++ T+V+V+ AC++     L   +   + +  +  
Sbjct: 234 GYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQL 293

Query: 377 DVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML 436
           + FV  AL+D+YAK G ++++ +LF   P RN VTWN+MI GY Q G+   A+ +F +M+
Sbjct: 294 NCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMI 353

Query: 437 E-EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSI 495
             +++   EVT  SV+ AC  L ALE G  V     +    + +   NA+I MY++CGS+
Sbjct: 354 TAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSM 413

Query: 496 TDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSAC 555
            DA+ VF  M   + VS+N +ISG++ HG   E + +   M++ G  P+ +TF+GVL+AC
Sbjct: 414 EDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTAC 473

Query: 556 SNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMI 615
           S+ GLLE+G   F+S+      +P I+HY  MV LLGR G L+ A + +E +P +P   +
Sbjct: 474 SHAGLLEEGRKVFESIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGV 528

Query: 616 WRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEK---------- 665
           + +LL A  IH  VE+G L+A  + + EP++    +LLSNIYA A  W+           
Sbjct: 529 YGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKK 588

Query: 666 -AASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRD 724
               K  G SW+E  G +H F   D SH   + I  +L  L  K R+AGYI D S VLRD
Sbjct: 589 GGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADKSCVLRD 648

Query: 725 VREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREII 784
           V E+EKE  +  HSEKLA+ +AL      + IR++KNLR+C DCHTAIK+ISK+  R II
Sbjct: 649 VEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVII 708

Query: 785 IRDVHRFHHFQDGCCSCGDFW 805
           +RD +RFH F DG CSC D+W
Sbjct: 709 VRDNNRFHCFNDGLCSCKDYW 729



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 117/270 (43%), Gaps = 23/270 (8%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E +  ++ T + +C    D   A ++   + +K   L+ F    LL++Y K   L  A K
Sbjct: 257 EPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARK 316

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFT--AFLKVLVSM 170
           LF+ MP RN +++ + I GY  + Q   A+ LF  +     +L P   T  + +     +
Sbjct: 317 LFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEM-ITAKKLTPDEVTMVSVISACGHL 375

Query: 171 GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF 223
           G  EL   V   + +     +     A+I  +S CG +E A++VF  +       +N   
Sbjct: 376 GALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLI 435

Query: 224 E---------EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
                     EA+N  S M+  G +P+  TF  VL AC     +   +       ++  +
Sbjct: 436 SGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRK----VFESIKD 491

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMP 304
             +     ++DL  + GE+ +A+R  E MP
Sbjct: 492 PAIDHYACMVDLLGRVGELEDAKRTMERMP 521


>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g11460
 gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
 gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 623

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 227/600 (37%), Positives = 342/600 (57%), Gaps = 19/600 (3%)

Query: 219 FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
           +   F E+++ +  M   G  P+ F+F F+LK+C  L      +  H    K   E + +
Sbjct: 30  YQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPF 89

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIP--WSFMIARYAQTDLSIDAVELFCRMRQ 336
           V  AL+ +Y K G +++AR++FEE P+   +   ++ +I+ Y       DA  +F RM++
Sbjct: 90  VLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKE 149

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             V+ +  T + ++  C   E L LG  +H   V+ GL S+V V N+ + +Y KCG +E 
Sbjct: 150 TGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEA 209

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
              LF E P +  +TWN +I GY Q G     + ++ +M    V     T  SVL +CA 
Sbjct: 210 GRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAH 269

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           L A + G +V  L     +  +V V+NA I MYA+CG++  AR VFD+M   + VSW AM
Sbjct: 270 LGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAM 329

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           I  Y MHG+    L +FD M +RG RP+   FV VLSACS+ GL ++G   F++M   Y 
Sbjct: 330 IGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYK 389

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
           +EP  EHY+ +V LLGRAG LD+A + IE +P +P   +W ALLGAC IH NV++  L+ 
Sbjct: 390 LEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAF 449

Query: 637 QHILDFEPEDEATHVLLSNIYAMARS----W-------EKAASKEPGLSWIENQGMVHYF 685
             +++FEP +   +VL+SNIY+ +++    W       E+A  K+PG S++E++G VH F
Sbjct: 450 AKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLF 509

Query: 686 RAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAF 745
            AGD SH     +  ML+ L         + +L+  +   R +E       HSE+LA+AF
Sbjct: 510 LAGDRSHEQTEEVHRMLDELETS------VMELAGNMDCDRGEEVSSTTREHSERLAIAF 563

Query: 746 ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            +    P + I +IKNLR+C DCH  +K +SKIV R+ ++RD  RFH+F+DG CSC D+W
Sbjct: 564 GILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/325 (32%), Positives = 178/325 (54%), Gaps = 4/325 (1%)

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
           PW+  +   A   L  +++ L+  M ++  +P+ F+F  +L++CA++     G Q+H  V
Sbjct: 20  PWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHV 79

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNH--VTWNTMIVGYVQLGEVGK 427
            + G  ++ FV  AL+ +Y KCG + ++ ++F E+P+ +   V +N +I GY    +V  
Sbjct: 80  TKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139

Query: 428 AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALID 487
           A  MF +M E  V    VT   ++  C     L  G  +H   VK   D +V V N+ I 
Sbjct: 140 AAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFIT 199

Query: 488 MYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLT 547
           MY KCGS+   R +FD M     ++WNA+ISGYS +GL+ +VL++++ M+  G  P+  T
Sbjct: 200 MYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFT 259

Query: 548 FVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGI 607
            V VLS+C++ G  + G    K +V + G  P +    + +S+  R G+L KA  + + +
Sbjct: 260 LVSVLSSCAHLGAKKIGHEVGK-LVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIM 318

Query: 608 PFQPSVMIWRALLGACIIHNNVEIG 632
           P + S++ W A++G   +H   EIG
Sbjct: 319 PVK-SLVSWTAMIGCYGMHGMGEIG 342



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 106/436 (24%), Positives = 189/436 (43%), Gaps = 23/436 (5%)

Query: 22  NAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQ 81
           N  LR L+ Q+  S    S S    +  S S  ++ S+   L+SC       +   +HC 
Sbjct: 22  NVRLRELAYQSLFSE---SISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCH 78

Query: 82  VLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTIS--FVTTIQGYTVSSQFV 139
           V K G   + F    L+++Y K   + DA K+F+E P+ + +S  +   I GYT +S+  
Sbjct: 79  VTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVT 138

Query: 140 EAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALI 199
           +A  +F  +   G  ++       + +     +  L   +     K G DS   V  + I
Sbjct: 139 DAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFI 198

Query: 200 DAFSVCGCVEFARKVFD-----GLF-----------NDCFEEALNFFSQMRAVGFKPNNF 243
             +  CG VE  R++FD     GL            N    + L  + QM++ G  P+ F
Sbjct: 199 TMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPF 258

Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
           T   VL +C  L   ++            +  +++V+ A + +Y + G ++ AR +F+ M
Sbjct: 259 TLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIM 318

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
           P K ++ W+ MI  Y    +    + LF  M +  + P+   FV VL AC+     D G 
Sbjct: 319 PVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGL 378

Query: 364 QIHSLVVR-VGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMIVGYVQ 421
           ++   + R   L       + L+D+  + GR++ ++E     P + +   W  ++     
Sbjct: 379 ELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKI 438

Query: 422 LGEVGKAMIMFSKMLE 437
              V  A + F+K++E
Sbjct: 439 HKNVDMAELAFAKVIE 454


>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 881

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 229/707 (32%), Positives = 385/707 (54%), Gaps = 30/707 (4%)

Query: 57  HSYAT---SLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
           H YAT    L++C   +D    + +HC  ++ G   D+     L+++Y    +L  A  +
Sbjct: 168 HDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNI 227

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           F EMPERN++ +   I GY  + +F E + L+  +  EG  ++   F +  +    +   
Sbjct: 228 FCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAF 287

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN------------- 220
           EL   + A   K     +  VGTA +D ++ C  +  ARKVF+   N             
Sbjct: 288 ELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGY 347

Query: 221 ---DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
              D   EAL  F  ++      +  + +  L AC  +         HG A+K   + ++
Sbjct: 348 ARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNI 407

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
            VA  +LD+Y K G +  A  IF++M  KD + W+ +IA + Q +   + + LF  M ++
Sbjct: 408 CVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRS 467

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            + P+ +TF SV++ACA  + L+ G ++H  V++ G+  D FV +A++D+Y KCG +  +
Sbjct: 468 TMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEA 527

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
            ++     +R  V+WN++I G+    +   A+  FS+ML+  V     TY++VL  CA+L
Sbjct: 528 EKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANL 587

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
           A +E G Q+H   +K     DV +A+ ++DMY+KCG++ D+R++F+     + V+W+AMI
Sbjct: 588 ATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMI 647

Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
             Y+ HGL  + +K+F+ MQ +  +PN+  F+ VL AC++ G +++G  YF+ M ++YG+
Sbjct: 648 CAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGL 707

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQ 637
           +P +EHY+ MV LLGR+G +++A +LIE +PF+   +IWR LLG C +  NVE+   +A 
Sbjct: 708 DPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAAN 767

Query: 638 HILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFR 686
            +L  +P+D + +VLLSN+YA+A  W + A            KEPG SWI+ +  VH F 
Sbjct: 768 SLLQLDPQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWIQVRDEVHAFL 827

Query: 687 AGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERY 733
            GD +H     I      L  + +  GY+P++   L D   DE++ Y
Sbjct: 828 VGDKAHPRSEEIYQQTHLLVDEMKWDGYVPEIDGFLLDEEVDEQDSY 874



 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 173/645 (26%), Positives = 297/645 (46%), Gaps = 66/645 (10%)

Query: 41  NSTTTPITFSVSEFNSH--------SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLF 92
           NS TTP  +++   +S+        +++   Q C     +      H Q+   G    +F
Sbjct: 16  NSQTTP-PYAIHSISSNQMNPTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVF 74

Query: 93  ATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTL---- 148
            +N LL  Y K   L  A  +FD+MP+R+ IS+ T I GY        A  LF ++    
Sbjct: 75  VSNCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERD 134

Query: 149 ----------------HREGHELNPFAFTAFLKVLVSMGWAELCPCVFACV--------- 183
                           HR+  E+    FT    + +   +A     + AC          
Sbjct: 135 VVSWNSMLSCYLQNGFHRKSIEI----FTKMRLLEIQHDYATFAVVLKACTGIEDYGLGL 190

Query: 184 ------YKLGHDSNAFVGTALIDAFSVCGCVEFARKVF----------------DGLFND 221
                  ++G DS+   GTAL+D +S C  ++ A  +F                  + ND
Sbjct: 191 QVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRND 250

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
            F E L  +  M   G   +  TFA   ++C GL    +    H  ALKT +  D  V  
Sbjct: 251 RFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGT 310

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           A LD+Y K   + +AR++F   P       + +I  YA+ D  ++A+E+F  ++++++  
Sbjct: 311 ATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDF 370

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           ++ +    L AC+ ++G   G Q+H L V+ GL  ++ V+N ++D+YAKCG +  +  +F
Sbjct: 371 DEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIF 430

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
            +   ++ V+WN +I  + Q   V + + +F  ML   +   + T+ SV++ACA   AL 
Sbjct: 431 DDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALN 490

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
            GM+VH   +K+   +D  V +A+IDMY KCG + +A  + + + +   VSWN++ISG+S
Sbjct: 491 YGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFS 550

Query: 522 MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
                   L  F  M Q G  P+N T+  VL  C+N   +E G+      +    +   +
Sbjct: 551 SEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQ-IHGQILKLQLHSDV 609

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH 626
              +++V +  + G++  +  + E  P +  V  W A++ A   H
Sbjct: 610 YIASTIVDMYSKCGNMQDSRIMFEKAPKRDYV-TWSAMICAYAYH 653



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 156/337 (46%), Gaps = 39/337 (11%)

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           + TF  + Q C+ ++ ++ G Q H+ +   G +  VFVSN L+  Y KC  +  +  +F 
Sbjct: 38  KLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFD 97

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQV-----------------PATEV 445
           + P+R+ ++WNTMI GY  +G +  A  +F  M E  V                  + E+
Sbjct: 98  KMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEI 157

Query: 446 --------------TYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAK 491
                         T++ VL+AC  +     G+QVHCL ++  +D DVV   AL+DMY+ 
Sbjct: 158 FTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYST 217

Query: 492 CGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGV 551
           C  +  A  +F  M + N V W+A+I+GY  +    E LK++ +M   G   +  TF   
Sbjct: 218 CKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASA 277

Query: 552 LSACSNGGLLEQG-EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQ 610
             +C+     E G + +  ++  N+G +  +   T+ + +  +   +  A K+    P  
Sbjct: 278 FRSCAGLSAFELGTQLHAYALKTNFGYDNIVG--TATLDMYAKCDRMVDARKVFNTFP-N 334

Query: 611 PSVMIWRALLGACIIHNNV----EIGRLSAQHILDFE 643
           P+     AL+      + V    EI R   +  LDF+
Sbjct: 335 PTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFD 371



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 140/291 (48%), Gaps = 30/291 (10%)

Query: 50  SVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD 109
           S  E + +++ + +++C     L   M +H +V+K G  LD F  + ++++Y K   L +
Sbjct: 467 STMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVE 526

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A K+ + + ER T+S+ + I G++   Q   A+  FS + + G   + F +   L +  +
Sbjct: 527 AEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICAN 586

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG------------ 217
           +   EL   +   + KL   S+ ++ + ++D +S CG ++ +R +F+             
Sbjct: 587 LATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAM 646

Query: 218 ----LFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL-------GLDTIRVAKSAHG 266
                ++   E+A+  F +M+    KPN+  F  VL+AC        GL   R  +S +G
Sbjct: 647 ICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYG 706

Query: 267 CALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
                  +M+ Y    ++DL  +SG+++ A  + E MP + D + W  ++ 
Sbjct: 707 LDP----QMEHY--SCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLG 751


>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 678

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 243/649 (37%), Positives = 352/649 (54%), Gaps = 62/649 (9%)

Query: 186 LGHD--SNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEAL 227
           + HD  SN  +G  L+ A++VCG     R +FD +                 N  + +AL
Sbjct: 63  IDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDAL 122

Query: 228 NFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLY 287
             F  M   G  P+++T+  VLKA  G + + V    H   ++   +++++V   L+ +Y
Sbjct: 123 LVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMY 182

Query: 288 TKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFV 347
            K G +  A R+ ++MP +DV+ W+ ++A  A+     DA+E+   M    + P+  T  
Sbjct: 183 GKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMA 242

Query: 348 SVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKR 407
           S+L A                           V+N  +D       +    E+F +   +
Sbjct: 243 SLLPA---------------------------VTNTCLD------NVSFVKEMFMKLANK 269

Query: 408 NHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVH 467
           + V+WN MI  Y+      +A+ +F +M +  V    ++ +SVL AC  L+AL  G ++H
Sbjct: 270 SLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIH 329

Query: 468 CLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSA 527
              V+     ++++ NALIDMYAKCG +  AR VFD M   + VSW +MIS Y M+G   
Sbjct: 330 EYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGR 389

Query: 528 EVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSM 587
           + + +F  MQ  G  P+++ FV VLSACS+ GLL++G  YFK M     I P IEH+  M
Sbjct: 390 DAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCM 449

Query: 588 VSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDE 647
           V LLGRAG +D+A   I+ +P +P+  +W ALL AC +++N+ IG L+A  +    PE  
Sbjct: 450 VDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQS 509

Query: 648 ATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMN 696
             +VLLSNIYA A  WE           K   K PG+S  E    VH F AGD SH    
Sbjct: 510 GYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSK 569

Query: 697 IIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPI 756
            I   L+    K ++AGY+P+  + L DV E++KE +L VHSEKLA+AFA+    P SPI
Sbjct: 570 QIYEELDVSVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPI 629

Query: 757 RIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           RI KNLR+C DCH A K+ISKIV REI IRD +RFHHF +G CSCGD+W
Sbjct: 630 RITKNLRVCGDCHIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 678



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 115/427 (26%), Positives = 198/427 (46%), Gaps = 55/427 (12%)

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +FDE+P++N + F   I+ Y  +  + +A+ +F  +   GH ++P  +T    +  S G 
Sbjct: 93  IFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNM--AGHGIDPDHYTYPCVLKASSGS 150

Query: 173 AELCPC--VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL------------ 218
            +L     + A V ++G D N FVG  LI  +  CGC+  A +V D +            
Sbjct: 151 EDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLV 210

Query: 219 ----FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
                N  F++AL    +M  +G KP+  T A +L A                   TC +
Sbjct: 211 AGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPA----------------VTNTCLD 254

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
                             +S  + +F ++  K ++ W+ MIA Y    +  +AV++F +M
Sbjct: 255 -----------------NVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQM 297

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
               V P+  +  SVL AC  +  L LG +IH  VVR  L  ++ + NAL+D+YAKCG +
Sbjct: 298 EDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCL 357

Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
           E + E+F +   R+ V+W +MI  Y   G+   A+ +FS+M +  +    + + SVL AC
Sbjct: 358 EYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSAC 417

Query: 455 ASLAALEPG-MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR-LVFDMMNDWNEVS 512
           +    L+ G      +T +      +     ++D+  + G + +A   +  M  + NE  
Sbjct: 418 SHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERV 477

Query: 513 WNAMISG 519
           W A++S 
Sbjct: 478 WGALLSA 484



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/367 (26%), Positives = 175/367 (47%), Gaps = 25/367 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           + ++Y   L++   ++DL   M IH  V++ G  L++F  N L+++Y K   L +A ++ 
Sbjct: 136 DHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVL 195

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D+MP R+ +S+ + + G   + QF +A+ +   +   G  L P A T           A 
Sbjct: 196 DQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLG--LKPDAGT----------MAS 243

Query: 175 LCPCVF-ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQM 233
           L P V   C+     D+ +FV    +   +    V +   +   + N    EA++ F QM
Sbjct: 244 LLPAVTNTCL-----DNVSFVKEMFM-KLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQM 297

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
                 P+  + A VL AC  L  + + +  H   ++   + +L +  AL+D+Y K G +
Sbjct: 298 EDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCL 357

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
             AR +F++M  +DV+ W+ MI+ Y       DAV LF RM+   + P+   FVSVL AC
Sbjct: 358 EYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSAC 417

Query: 354 ATMEGLDLGNQIHSLVV---RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNH 409
           +    LD G     L+    ++    + FV   ++D+  + G+++ +     + P + N 
Sbjct: 418 SHAGLLDEGRYYFKLMTEECKIVPRIEHFV--CMVDLLGRAGQVDEAYGFIKQMPMEPNE 475

Query: 410 VTWNTMI 416
             W  ++
Sbjct: 476 RVWGALL 482


>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
 gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 225/609 (36%), Positives = 348/609 (57%), Gaps = 21/609 (3%)

Query: 214 VFDGLFNDCFEEAL-----NFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCA 268
           V+  L   C +  L          ++  GF P  F    +L+     D++  ++      
Sbjct: 72  VYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKL---- 127

Query: 269 LKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAV 328
                E DL     L+  Y K G +  A+ +F++MP++D   W+ MI+ Y + D   +A+
Sbjct: 128 FDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEAL 187

Query: 329 ELFCRMRQAFVAP-NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDV 387
           ELF  M+++  +  N+FT  S L A A +  L +G +IH  ++R GL SD  V +AL D+
Sbjct: 188 ELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDM 247

Query: 388 YAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTY 447
           Y KCG +E +  +F +   R+ VTW  MI  Y Q G   +   +F+ +L   +   E T+
Sbjct: 248 YGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTF 307

Query: 448 SSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND 507
           S VL ACA+  + E G +VH    +  +D     A+AL+ MY+KCG++  A  VF     
Sbjct: 308 SGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQ 367

Query: 508 WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAY 567
            +  SW ++I+GY+ +G   E ++ F+L+ + G +P+++TFVGVLSAC++ GL+++G  Y
Sbjct: 368 PDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDY 427

Query: 568 FKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
           F S+   YG+    +HY  ++ LL R+G  D+A  +I  +  +P   +W +LLG C IH 
Sbjct: 428 FHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHG 487

Query: 628 NVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWI 676
           N+++ + +A+ + + EPE+ AT+V L+NIYA A  W + A            K+PGLSWI
Sbjct: 488 NLKLAQRAAEALFEIEPENPATYVTLANIYATAGMWSEVAKIRKTMDDRGVVKKPGLSWI 547

Query: 677 ENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWV 736
             +  VH F  GD SH     I   L  L+ + ++ G++PD + VL DV +++KE+ L  
Sbjct: 548 AIKRDVHVFLVGDDSHPKSKEINEFLGKLSKRMKEEGFVPDTNFVLHDVEDEQKEQNLSY 607

Query: 737 HSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQD 796
           HSEKLA+AF +   P  +PI++ KNLR CVDCHTAIK ISKI  R+II+RD +RFH F+D
Sbjct: 608 HSEKLAVAFGIISTPEGTPIKVFKNLRTCVDCHTAIKFISKITNRKIIVRDSNRFHFFED 667

Query: 797 GCCSCGDFW 805
           G CSC D+W
Sbjct: 668 GHCSCRDYW 676



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 128/470 (27%), Positives = 214/470 (45%), Gaps = 60/470 (12%)

Query: 37  QQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNV 96
           QQ        I   + + ++  Y+T +QSCI++  LQ    +H  +   G    LF  N 
Sbjct: 51  QQNRLKEALQILHQIDKPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNR 110

Query: 97  LLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELN 156
           LL +Y K + L D+ KLFDEMPER+  S+   I GY       EA  LF  +     E +
Sbjct: 111 LLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKM----PERD 166

Query: 157 PFAFTAF-------------LKVLVSMGWAE-----------------LCPC------VF 180
            F++TA              L++   M  ++                   PC      + 
Sbjct: 167 NFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIH 226

Query: 181 ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------FNDC-FE 224
             + + G DS+  V +AL D +  CG +E AR +FD +               F D   +
Sbjct: 227 GYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRK 286

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           E  + F+ +   G +PN FTF+ VL AC    +  + K  HG   +  ++   + A AL+
Sbjct: 287 EGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALV 346

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
            +Y+K G + +A R+F+E P+ D+  W+ +IA YAQ     +A+  F  + ++   P+  
Sbjct: 347 HMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHI 406

Query: 345 TFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
           TFV VL ACA    +D G +  HS+  + GL         ++D+ A+ G+ + +  + ++
Sbjct: 407 TFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISK 466

Query: 404 -SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKM--LEEQVPATEVTYSSV 450
            S K +   W +++ G    G +  A      +  +E + PAT VT +++
Sbjct: 467 MSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLANI 516



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 165/338 (48%), Gaps = 43/338 (12%)

Query: 326 DAVELFC---RMRQAFV------APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLS 376
           +A+ + C   R+++A         P+   + +++Q+C     L  G ++H  +   G + 
Sbjct: 44  EAIHILCQQNRLKEALQILHQIDKPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVP 103

Query: 377 DVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML 436
            +F+ N L+++YAKC  + +S +LF E P+R+  +WN +I GY ++G + +A  +F KM 
Sbjct: 104 GLFILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMP 163

Query: 437 E--------------------------------EQVPATEVTYSSVLRACASLAALEPGM 464
           E                                +   + + T SS L A A++  L  G 
Sbjct: 164 ERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGK 223

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
           ++H   ++   D D VV +AL DMY KCGSI +AR +FD M D + V+W AMI  Y   G
Sbjct: 224 EIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDG 283

Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY 584
              E   +F  + + G RPN  TF GVL+AC+N    E G+     M    G +P     
Sbjct: 284 RRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMT-RVGFDPFSFAA 342

Query: 585 TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           +++V +  + G++  A ++ +  P QP +  W +L+  
Sbjct: 343 SALVHMYSKCGNMVSAERVFKETP-QPDLFSWTSLIAG 379


>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 642

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 241/642 (37%), Positives = 348/642 (54%), Gaps = 74/642 (11%)

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           LNF  Q   +  KP  FT      +C    T R  K  H   +KT    D   A  ++  
Sbjct: 12  LNFSPQPPLILSKP--FT------SC---KTPRDLKQLHAIFIKTGQIQDPLTAAEVIKF 60

Query: 287 YT-KSGEISNARRIFEEMPKKDVIPWSFMIARYAQTD---LSIDAVELFCRMR-QAFVAP 341
               S +I  AR +F +MP+ +   W+ ++   A+T+   L  +A+ LF  M     V P
Sbjct: 61  CAFSSRDIDYARAVFRQMPEPNCFCWNTILRILAETNDEHLQSEALMLFSAMLCDGRVKP 120

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           N+FTF SVL+ACA    L  G QIH L+V+ G   D FV + L+ +Y  C  ME++  LF
Sbjct: 121 NRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLF 180

Query: 402 A-----------------------------------------------ESPKRNHVTWNT 414
                                                           E P R+ V+WN 
Sbjct: 181 CKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNV 240

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
           MI GY Q G   +A+ +F +M    +    VT  SVL A A + ALE G  +H    K  
Sbjct: 241 MISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNK 300

Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
            ++D V+ +AL+DMY+KCGSI  A  VF+ +   N ++W+A+I  ++MHG + + +  F 
Sbjct: 301 VEIDDVLGSALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFH 360

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
           LM + G  PN++ ++G+LSACS+ GL+E+G ++F  MV   G++P IEHY  MV LLGRA
Sbjct: 361 LMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRA 420

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLS 654
           GHL++A +LI  +P +P  +IW+ALLGAC +H N+++G   A+ +++  P D  ++V LS
Sbjct: 421 GHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALS 480

Query: 655 NIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLE 703
           N+YA   +WE  A            K+PG SWIE  G++H F   D SH+    I+ ML 
Sbjct: 481 NLYASLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLG 540

Query: 704 WLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLR 763
            ++MK R  GY P+   V  +  E E+ R L  HSEK+A+AF L    P  P++I+KNLR
Sbjct: 541 EMSMKLRSNGYRPNTLEVFLNTDEQERARALQYHSEKIAVAFGLISTAPQHPLKIVKNLR 600

Query: 764 ICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           IC DCH ++K+IS I +R+II+RD  RFH F+ G CSC D+W
Sbjct: 601 ICEDCHASLKLISLIYKRQIIVRDRKRFHQFEHGSCSCMDYW 642



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 102/425 (24%), Positives = 175/425 (41%), Gaps = 73/425 (17%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  ++ + L++C +   L+    IH  ++K G   D F  + L+ +YV    + DA  LF
Sbjct: 121 NRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLF 180

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
                +N + F  + Q                       EL+                  
Sbjct: 181 C----KNVVDFDGSCQ----------------------MELD------------------ 196

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
                     K   D N  +   +ID     G ++ A+ +FD +                
Sbjct: 197 ----------KRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYA 246

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            N  F EA+N F +M++    PN  T   VL A   +  + + K  H  A K   E+D  
Sbjct: 247 QNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDV 306

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           +  AL+D+Y+K G I  A ++FE +PK++ I WS +I  +A    + DA+  F  M +A 
Sbjct: 307 LGSALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAG 366

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR-VGLLSDVFVSNALMDVYAKCGRMENS 397
           V PN   ++ +L AC+    ++ G    S +V+ VGL   +     ++D+  + G +E +
Sbjct: 367 VTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEA 426

Query: 398 VELFAESP-KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
            EL    P + + V W  ++ G  ++ +  K     ++ L E  P    +Y ++    AS
Sbjct: 427 EELIRNMPIEPDDVIWKALL-GACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYAS 485

Query: 457 LAALE 461
           L   E
Sbjct: 486 LGNWE 490


>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 741

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 231/627 (36%), Positives = 338/627 (53%), Gaps = 46/627 (7%)

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           EA+  ++ +RA G KP+N  F  V KAC         K  H  A++     D ++  AL+
Sbjct: 115 EAIRLYASLRARGIKPHNSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALI 174

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
             Y K   +  ARR+F+++  KDV+ W+ M + Y    L    + +FC M    V PN  
Sbjct: 175 HAYGKCKCVEGARRVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSV 234

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           T  S+L AC+ ++ L  G  IH   VR G++ +VFV +AL+ +YA+C  ++ +  +F   
Sbjct: 235 TLSSILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLM 294

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTY----------------- 447
           P R+ V+WN ++  Y    E  K + +FS+M  + V A E T+                 
Sbjct: 295 PHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAV 354

Query: 448 ------------------SSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMY 489
                             SS L AC+ L +L  G +VHC   +     D+    AL+ MY
Sbjct: 355 EMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMY 414

Query: 490 AKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFV 549
           AKCG +  +R VFDM+   + V+WN MI   +MHG   EVL +F+ M Q G +PN++TF 
Sbjct: 415 AKCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFT 474

Query: 550 GVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF 609
           GVLS CS+  L+E+G   F SM  ++ +EP   HY  MV +  RAG L +A + I+ +P 
Sbjct: 475 GVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPM 534

Query: 610 QPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW------ 663
           +P+   W ALLGAC ++ NVE+ ++SA  + + EP +   +V L NI   A+ W      
Sbjct: 535 EPTASAWGALLGACRVYKNVELAKISANKLFEIEPNNPGNYVSLFNILVTAKLWSEASEA 594

Query: 664 -----EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDL 718
                E+  +K PG SW++    VH F  GD ++ + + I   L+ L  K + AGY PD 
Sbjct: 595 RILMKERGITKTPGCSWLQVGDRVHTFVVGDKNNMESDKIYNFLDELGEKMKSAGYKPDT 654

Query: 719 SAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKI 778
             VL+D+ ++EK   L  HSEKLA+AF +  +   S IR+ KNLRIC DCH AIK +SK+
Sbjct: 655 DYVLQDIDQEEKAESLCSHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIKYVSKV 714

Query: 779 VQREIIIRDVHRFHHFQDGCCSCGDFW 805
           V   II+RD  RFHHF++G CSC D W
Sbjct: 715 VGVTIIVRDSLRFHHFRNGNCSCQDLW 741



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 217/480 (45%), Gaps = 65/480 (13%)

Query: 97  LLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELN 156
           LL   + +     A +LFD +P+ +  +  T I  +T      EA+ L+++L   G + +
Sbjct: 72  LLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPH 131

Query: 157 PFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD 216
              F    K   + G A     V     + G  S+AF+G ALI A+  C CVE AR+VFD
Sbjct: 132 NSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFD 191

Query: 217 GL----------FNDCFEE------ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRV 260
            L           + C+         L  F +M   G KPN+ T + +L AC  L  ++ 
Sbjct: 192 DLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKS 251

Query: 261 AKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARY-- 318
            ++ HG A++     +++V  AL+ LY +   +  AR +F+ MP +DV+ W+ ++  Y  
Sbjct: 252 GRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFT 311

Query: 319 ---------------------------------AQTDLSIDAVELFCRMRQAFVAPNQFT 345
                                             +   +  AVE+  +M+     PNQ T
Sbjct: 312 NREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQIT 371

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
             S L AC+ +E L +G ++H  V R  L+ D+    AL+ +YAKCG +  S  +F    
Sbjct: 372 ISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMIC 431

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
           +++ V WNTMI+     G   + +++F  ML+  +    VT++ VL  C+    +E G+Q
Sbjct: 432 RKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQ 491

Query: 466 V-------HCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMI 517
           +       H +   AN+         ++D++++ G + +A   +  M  +    +W A++
Sbjct: 492 IFNSMGRDHLVEPDANH------YACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALL 545



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 152/302 (50%), Gaps = 1/302 (0%)

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
           ++ + LL      G+   A+++F+ +P+ D    S +I+ +    L  +A+ L+  +R  
Sbjct: 67  HLGLRLLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRAR 126

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            + P+   F++V +AC          ++H   +R G++SD F+ NAL+  Y KC  +E +
Sbjct: 127 GIKPHNSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGA 186

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
             +F +   ++ V+W +M   YV  G     + +F +M    V    VT SS+L AC+ L
Sbjct: 187 RRVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSEL 246

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
             L+ G  +H   V+     +V V +AL+ +YA+C S+  ARLVFD+M   + VSWN ++
Sbjct: 247 KDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVL 306

Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
           + Y  +    + L +F  M  +G   +  T+  V+  C   G  E+     + M  N G 
Sbjct: 307 TAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKM-QNLGF 365

Query: 578 EP 579
           +P
Sbjct: 366 KP 367



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/401 (23%), Positives = 178/401 (44%), Gaps = 54/401 (13%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           NS + ++ L +C +  DL++   IH   ++ G   ++F  + L+++Y +   +  A  +F
Sbjct: 232 NSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVF 291

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D MP R+ +S+   +  Y  + ++ + + LFS +  +G E +   +              
Sbjct: 292 DLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATW-------------- 337

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMR 234
                           NA +G          GC+E          N   E+A+    +M+
Sbjct: 338 ----------------NAVIG----------GCME----------NGQTEKAVEMLRKMQ 361

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
            +GFKPN  T +  L AC  L+++R+ K  H    +     DL    AL+ +Y K G+++
Sbjct: 362 NLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLN 421

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
            +R +F+ + +KDV+ W+ MI   A      + + LF  M Q+ + PN  TF  VL  C+
Sbjct: 422 LSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCS 481

Query: 355 TMEGLDLGNQIHSLVVRVGLLS-DVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT-W 412
               ++ G QI + + R  L+  D      ++DV+++ GR+  + E     P     + W
Sbjct: 482 HSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAW 541

Query: 413 NTMIVGYVQLGEVGKAMIMFSKM--LEEQVPATEVTYSSVL 451
             ++        V  A I  +K+  +E   P   V+  ++L
Sbjct: 542 GALLGACRVYKNVELAKISANKLFEIEPNNPGNYVSLFNIL 582


>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Glycine max]
          Length = 785

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 247/719 (34%), Positives = 374/719 (52%), Gaps = 28/719 (3%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           SE   ++Y + LQ C +   L+    +H  +   G  +D      L+ +YV    L    
Sbjct: 53  SELELNTYCSVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGR 112

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
           ++FD +       +   +  Y     + E+VGLF  +   G   + + FT  LK   +  
Sbjct: 113 RIFDGILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASA 172

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL------------- 218
               C  V   V KLG  S   V  +LI A+  CG VE AR +FD L             
Sbjct: 173 KVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMIS 232

Query: 219 ---FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
               N      L FF QM  +G   ++ T   VL AC  +  + + ++ H   +K  +  
Sbjct: 233 GCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSG 292

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
            +     LLD+Y+K G ++ A  +F +M +  ++ W+ +IA + +  L  +A+ LF  M+
Sbjct: 293 GVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQ 352

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
              + P+ +   SV+ ACA    LD G ++H+ + +  + S++ VSNALM++YAKCG ME
Sbjct: 353 SKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSME 412

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
            +  +F++ P +N V+WNTMI GY Q     +A+ +F  M ++Q+   +VT + VL ACA
Sbjct: 413 EANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDM-QKQLKPDDVTMACVLPACA 471

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
            LAALE G ++H   ++  Y  D+ VA AL+DMY KCG +  A+ +FDM+   + + W  
Sbjct: 472 GLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTV 531

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           MI+GY MHG   E +  F+ M+  G  P   +F  +L AC++ GLL++G   F SM +  
Sbjct: 532 MIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSEC 591

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS 635
            IEP +EHY  MV LL R+G+L +A K IE +P +P   IW ALL  C IH++VE+    
Sbjct: 592 NIEPKLEHYACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEKV 651

Query: 636 AQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHY 684
           A+HI + EPE+   +VLL+N+YA A  WE+               + G SWIE QG  + 
Sbjct: 652 AEHIFELEPENTRYYVLLANVYAEAEKWEEVKKIQRRISKGGLKNDQGCSWIEVQGKFNI 711

Query: 685 FRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLAL 743
           F AGDTSH    +I  +L  L MK  + GY   +   L +  +  KE  L  HSEKLA+
Sbjct: 712 FFAGDTSHPQAKMIDSLLRKLTMKMNRGGYSNKIKYALINADDRLKEVLLCAHSEKLAM 770


>gi|357462829|ref|XP_003601696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355490744|gb|AES71947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 616

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 226/598 (37%), Positives = 337/598 (56%), Gaps = 45/598 (7%)

Query: 253 LGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWS 312
           LG     +AK  H   +K+           L+D Y K G + +A ++F+ +P++D + W+
Sbjct: 19  LGRKNPFIAKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDHVAWA 78

Query: 313 FMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL--DLGNQIHSLVV 370
            +++    ++L   A  +   +    + P+ F F S+++ACA +  +   LG Q+H+  +
Sbjct: 79  TVLSACNLSNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSVHVKLGKQLHARFL 138

Query: 371 RVGLLSDVFVSNALMDVYAK-------------------------------CGRMENSVE 399
                 D  V ++L+D+YAK                                GR   ++E
Sbjct: 139 LSPFFEDDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARSGRKLEALE 198

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVP-ATEVTYSSVLRACASLA 458
           LF ESP +N   W  +I G VQ G    A+ +F +M  E V  A  +  SSV+ ACA+ A
Sbjct: 199 LFRESPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSVVGACANSA 258

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
             E G QVHC+ +   Y+  + ++NAL+DMYAKC  +  A+ +F  M   + VSW ++I 
Sbjct: 259 VRELGKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIV 318

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           G + HGL+ E L ++D M   G +PN +TFVG++ ACS+ GL+ +G A FKSMV ++GI 
Sbjct: 319 GTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIR 378

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P ++HYT ++ L  R+GHLD+A  LI  +P +P    W ALL AC  H N ++    A H
Sbjct: 379 PSLQHYTCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVRIADH 438

Query: 639 ILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRA 687
           +LD +PED ++++LLSNIYA A  WE           K   K PG S ++       F A
Sbjct: 439 LLDLKPEDPSSYILLSNIYAGAGMWENVSMVRKLMAVKEVKKVPGYSCVDLGREFQVFHA 498

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFAL 747
           G+ S    + I G++  L+ + R+ GY+PD S+VL D+ + EKER L+ HSE+LALA+ L
Sbjct: 499 GEASQPMKDEILGLMTKLDSEMRRRGYVPDTSSVLLDMDQQEKERQLFWHSERLALAYGL 558

Query: 748 FKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            K  P + IRI+KNLR+C DCHT +K+IS I  REI +RDV R+HHF+DG CSC DFW
Sbjct: 559 LKAVPGTTIRIVKNLRVCGDCHTVLKLISAITSREIYVRDVKRYHHFKDGKCSCNDFW 616



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 100/439 (22%), Positives = 189/439 (43%), Gaps = 72/439 (16%)

Query: 75  AMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTV 134
           A  +H Q++K G          L++ Y K   L DA KLFD +P+++ +++ T +    +
Sbjct: 27  AKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACNL 86

Query: 135 SSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNA-- 192
           S+   +A  +   +  EG + + F F++ +K   ++G   +         KLG   +A  
Sbjct: 87  SNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSVHV---------KLGKQLHARF 137

Query: 193 ---------FVGTALIDAFSVCGCVEFARKVFDGLFN----------------------- 220
                     V ++L+D ++     ++ R VFD +F                        
Sbjct: 138 LLSPFFEDDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARSGRKLEAL 197

Query: 221 DCFEE------------------------ALNFFSQMRAVGFK-PNNFTFAFVLKACLGL 255
           + F E                        AL  F +MR  G    +    + V+ AC   
Sbjct: 198 ELFRESPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSVVGACANS 257

Query: 256 DTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMI 315
               + K  H   +   YE  L+++ AL+D+Y K  ++  A+ IF EM +KDV+ W+ +I
Sbjct: 258 AVRELGKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSII 317

Query: 316 ARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI-HSLVVRVGL 374
              AQ  L+ +A+ L+  M  A V PN+ TFV ++ AC+ +  +  G  +  S+V   G+
Sbjct: 318 VGTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGI 377

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
              +     L+D++++ G ++ +  L    P K +  TW  ++      G    A+ +  
Sbjct: 378 RPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVRIAD 437

Query: 434 KMLE--EQVPATEVTYSSV 450
            +L+   + P++ +  S++
Sbjct: 438 HLLDLKPEDPSSYILLSNI 456


>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 623

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 231/599 (38%), Positives = 337/599 (56%), Gaps = 21/599 (3%)

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
           F +AL+ + QM   G +PN FTF F LK+C  L    +    HG   K     + +V   
Sbjct: 30  FLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTG 89

Query: 283 LLDLYTKSGEISNARRIFEE--MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
           L+ +Y K   + NAR++FEE    +K  + ++ +++ Y       +AV LF +M +  V 
Sbjct: 90  LISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVP 149

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
            N  T + ++ AC +   L+LG+ +H   ++ G  SDV V N  + +Y KCG +  + +L
Sbjct: 150 VNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKL 209

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F E P +  ++WN M+ GY Q G     + ++  M    V    VT   VL +CA+L A 
Sbjct: 210 FDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQ 269

Query: 461 EPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY 520
             G +V      + +  +  + NALI+MYA+CG++T A+ VFD M +   VSW A+I GY
Sbjct: 270 SVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGY 329

Query: 521 SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPC 580
            MHG     +++F  M + G  P+   FV VLSACS+ GL +QG  YFK M  NY +EP 
Sbjct: 330 GMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPG 389

Query: 581 IEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHIL 640
            EHY+ MV LLGRAG L +A  LIE +P +P   +W ALLGAC IH NVE+  L+ + ++
Sbjct: 390 PEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVI 449

Query: 641 DFEPEDEATHVLLSNIYAMARS-----------WEKAASKEPGLSWIENQGMVHYFRAGD 689
           + EPE+   +VLLSNIY+ A +            EK   K+PG S++E +G VH F  GD
Sbjct: 450 ELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYVELKGRVHPFIVGD 509

Query: 690 TSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKE---RYLWVHSEKLALAFA 746
            +H   + I  +LE L     +A  + +     +D RE+  +     + VHSEKLA+AF 
Sbjct: 510 RNHLQSDEIYRVLEEL-----EAIIMQEFGKPEKDNREESNKDGFTRVGVHSEKLAVAFG 564

Query: 747 LFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           L      + + IIKNLRIC DCH   K++SKIV R++ +RD  RFHHF++G CSC D+W
Sbjct: 565 LLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDATRFHHFRNGSCSCKDYW 623



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 110/325 (33%), Positives = 186/325 (57%), Gaps = 6/325 (1%)

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
           PW+  +   A+    + A+ L+ +M +    PN FTF   L++CA +    LG+Q H  +
Sbjct: 16  PWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQI 75

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES--PKRNHVTWNTMIVGYVQLGEVGK 427
            +VG + + FV   L+ +Y K   ++N+ ++F E+   ++  V +N ++ GYV   +  +
Sbjct: 76  TKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSE 135

Query: 428 AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALID 487
           A+++F +M EE VP   VT   ++ AC S   LE G  +HC T+K  +D DV V N  I 
Sbjct: 136 AVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFIT 195

Query: 488 MYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLT 547
           MY KCGS+  A+ +FD M     +SWNAM+SGY+ +GL+  VL+++  M   G  P+ +T
Sbjct: 196 MYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVT 255

Query: 548 FVGVLSACSNGGLLEQG-EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEG 606
            VGVLS+C+N G    G E  FK   + +   P + +  +++++  R G+L KA  + +G
Sbjct: 256 LVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNN--ALINMYARCGNLTKAQAVFDG 313

Query: 607 IPFQPSVMIWRALLGACIIHNNVEI 631
           +P + +++ W A++G   +H + EI
Sbjct: 314 MP-ERTLVSWTAIIGGYGMHGHGEI 337



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 197/408 (48%), Gaps = 22/408 (5%)

Query: 137 QFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGT 196
           QF++A+ L+  + R G   N F F   LK   ++    L       + K+G     FV T
Sbjct: 29  QFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQT 88

Query: 197 ALIDAFSVCGCVEFARKVFDGLFND-----CFE-------------EALNFFSQMRAVGF 238
            LI  +     V+ ARKVF+  F+      C+              EA+  F QM   G 
Sbjct: 89  GLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGV 148

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
             N+ T   ++ AC+    + +  S H   LK  ++ D+ V    + +Y K G ++ A++
Sbjct: 149 PVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQK 208

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           +F+EMP K +I W+ M++ YAQ  L+ + +EL+  M    V P+  T V VL +CA +  
Sbjct: 209 LFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGA 268

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
             +G+++   +   G  S+ F++NAL+++YA+CG +  +  +F   P+R  V+W  +I G
Sbjct: 269 QSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGG 328

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           Y   G    A+ +F +M+   +      +  VL AC+     + G++   + +K NY ++
Sbjct: 329 YGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKM-MKRNYQLE 387

Query: 479 VVVAN--ALIDMYAKCGSITDARLVFDMMN-DWNEVSWNAMISGYSMH 523
               +   ++D+  + G + +A+ + + M    +   W A++    +H
Sbjct: 388 PGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIH 435



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 96/403 (23%), Positives = 174/403 (43%), Gaps = 20/403 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N+ ++  +L+SC            H Q+ K G   + F    L+++Y K + + +A K+F
Sbjct: 48  NAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVF 107

Query: 115 DE--MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +E     + T+ +   + GY  +S+  EAV LF  ++ EG  +N       +   VS   
Sbjct: 108 EENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPIN 167

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-----GLF-------- 219
            EL   +     K G DS+  V    I  +  CG V +A+K+FD     GL         
Sbjct: 168 LELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSG 227

Query: 220 ---NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
              N      L  +  M   G  P+  T   VL +C  L    V          + +  +
Sbjct: 228 YAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSN 287

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
            ++  AL+++Y + G ++ A+ +F+ MP++ ++ W+ +I  Y        AV+LF  M +
Sbjct: 288 PFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIR 347

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR-VGLLSDVFVSNALMDVYAKCGRME 395
           + + P+   FV VL AC+     D G +   ++ R   L       + ++D+  + GR++
Sbjct: 348 SGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLK 407

Query: 396 NSVELFAESP-KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
            +  L    P K +   W  ++        V  A + F +++E
Sbjct: 408 EAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIE 450


>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g68930-like [Cucumis
           sativus]
          Length = 695

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 236/688 (34%), Positives = 367/688 (53%), Gaps = 70/688 (10%)

Query: 149 HREGHELNP---FAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVC 205
           H E H   P   F     L +    G       +F  + K     + F   AL+ A++  
Sbjct: 47  HMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKMLK----RDXFSWNALLSAYAKS 102

Query: 206 GCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVL 249
           G ++  +  FD +                 N C +E+L  F +M+  GF+P  +T   +L
Sbjct: 103 GSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSIL 162

Query: 250 KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
            A   L  +R  K  HG  +   +  ++++  AL D+Y K GEI  AR +F+ + KK+++
Sbjct: 163 NASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLV 222

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
            W+ MI+ YA+       + L  +MR +   P+Q T  +++ A                 
Sbjct: 223 SWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA----------------- 265

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAM 429
                             Y +CGR++ +  +F+E  +++ V W  M+VGY + G    A+
Sbjct: 266 ------------------YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDAL 307

Query: 430 IMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMY 489
           ++F++ML E +     T SSV+ +CA LA+L  G  VH  ++ A  + +++V++ALIDMY
Sbjct: 308 LLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMY 367

Query: 490 AKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFV 549
           +KCG I DAR VF++M   N VSWNAMI G + +G   + L++F+ M Q+ ++P+N+TF+
Sbjct: 368 SKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFI 427

Query: 550 GVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF 609
           G+LSAC +   +EQG+ YF S+   +G+ P ++HY  MV+LLGR G +++A  LI+ +  
Sbjct: 428 GILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAH 487

Query: 610 QPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS- 668
            P  +IW  LL  C    ++    ++A+H+ + +P     +++LSN+YA    W+  AS 
Sbjct: 488 DPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASV 547

Query: 669 ----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDL 718
                     K  G SWIE    VH F + D +H +   I   L  L  K ++ G+ P+ 
Sbjct: 548 RNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNT 607

Query: 719 SAVLRDVREDEKERYLWVHSEKLALAFALFKMPPS-SPIRIIKNLRICVDCHTAIKIISK 777
           + VL DV EDEK + +  HSEKLALAF L K P   SPIRIIKN+RIC DCH  +K  S+
Sbjct: 608 NLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIKNIRICNDCHEFMKFASR 667

Query: 778 IVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           I+ R+II+RD +RFHHF  G CSC D W
Sbjct: 668 IIGRQIILRDSNRFHHFSTGKCSCNDNW 695



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 129/479 (26%), Positives = 224/479 (46%), Gaps = 61/479 (12%)

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
           L+ A  +  ++LK+    D F+ N LL+ Y K   + +    FD MP R+++S+ TTI G
Sbjct: 74  LRDAQNLFDKMLKR----DXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAG 129

Query: 132 YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSN 191
           ++ +S   E++ LF  + REG E   +   + L     +        +   +       N
Sbjct: 130 FSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGN 189

Query: 192 AFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRA 235
            F+  AL D ++ CG +E AR +FD L                 N   E+ +    QMR 
Sbjct: 190 VFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRL 249

Query: 236 VGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISN 295
            G  P+  T + ++ A                                   Y + G +  
Sbjct: 250 SGHMPDQVTMSTIIAA-----------------------------------YCQCGRVDE 274

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACAT 355
           ARR+F E  +KD++ W+ M+  YA+     DA+ LF  M    + P+ +T  SV+ +CA 
Sbjct: 275 ARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAK 334

Query: 356 MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTM 415
           +  L  G  +H   +  GL +++ VS+AL+D+Y+KCG ++++  +F   P RN V+WN M
Sbjct: 335 LASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAM 394

Query: 416 IVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY 475
           IVG  Q G    A+ +F  ML+++     VT+  +L AC     +E G Q +  ++   +
Sbjct: 395 IVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQG-QEYFDSISNQH 453

Query: 476 DMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHG--LSAEV 529
            M   + +   ++++  + G I  A  L+ +M +D + + W+ ++S  S  G  ++AEV
Sbjct: 454 GMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEV 512



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 104/426 (24%), Positives = 190/426 (44%), Gaps = 58/426 (13%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E   ++  + L +  Q  DL+    IH  ++ +    ++F  N L ++Y K   +  A  
Sbjct: 152 EPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARW 211

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           LFD + ++N +S+   I GY  + Q  + +GL   +   GH          +   V+M  
Sbjct: 212 LFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGH----------MPDQVTM-- 259

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------------- 218
                                  + +I A+  CG V+ AR+VF                 
Sbjct: 260 -----------------------STIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVG 296

Query: 219 --FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
              N   E+AL  F++M     +P+++T + V+ +C  L ++   ++ HG ++      +
Sbjct: 297 YAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNN 356

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           L V+ AL+D+Y+K G I +AR +F  MP ++V+ W+ MI   AQ     DA+ELF  M Q
Sbjct: 357 LLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQ 416

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQ-IHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
               P+  TF+ +L AC     ++ G +   S+  + G+   +     ++++  + GR+E
Sbjct: 417 QKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIE 476

Query: 396 NSVEL---FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLR 452
            +V L    A  P  + + W+T++      G++  A +  ++ L E  P   V Y  +  
Sbjct: 477 QAVALIKNMAHDP--DFLIWSTLLSICSTKGDIVNAEVA-ARHLFELDPTIAVPYIMLSN 533

Query: 453 ACASLA 458
             AS+ 
Sbjct: 534 MYASMG 539



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 5/180 (2%)

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQV-PATEVTYSSVLR 452
           +  SV+L           +  +++  V+  E+ +A  + S M      P     ++ +L 
Sbjct: 7   LRQSVDLLCSRSTATSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLH 66

Query: 453 ACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS 512
             A    L     +    +K     D    NAL+  YAK GSI + +  FD M   + VS
Sbjct: 67  LYAKFGKLRDAQNLFDKMLKR----DXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVS 122

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
           +N  I+G+S +    E L++F  MQ+ G+ P   T V +L+A +    L  G+    S++
Sbjct: 123 YNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSII 182


>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 762

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 225/593 (37%), Positives = 348/593 (58%), Gaps = 20/593 (3%)

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           EAL  +  M   G KP++ T+ FV+KAC            H   +K+ +E D Y+  +L+
Sbjct: 178 EALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLI 237

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
            LY    ++  A+++F     +DV+ W+ MI  Y +      A  +F RM    V  +  
Sbjct: 238 HLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDRM----VCRDVI 293

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           ++ +++   A +  +D   ++   +    L+S     N+++  + KCG +E++  LF+E 
Sbjct: 294 SWNTMINGYAIVGKIDEAKRLFDEMPERNLVS----WNSMLAGFVKCGNVEDAFGLFSEM 349

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
           P R+ V+WN+M+  Y Q G+  +A+ +F +M    V  TE T  S+L ACA L AL+ G+
Sbjct: 350 PCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGL 409

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
            +H        +++ +V  AL+DMYAKCG I+ A  VF+ M   + ++WN +I+G ++HG
Sbjct: 410 HLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHG 469

Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY 584
              E  ++F  M++ G  PN++TFV +LSACS+ G++++G+     M ++YGIEP +EHY
Sbjct: 470 NVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHY 529

Query: 585 TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEP 644
             ++ LL RAG L++A +LI  +P +P+     ALLG C IH N E+G +  + +++ +P
Sbjct: 530 GCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQP 589

Query: 645 EDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHA 693
                ++LLSNIYA A+ W+ A            SK PG+S IE +GMVH F AGD SH 
Sbjct: 590 CHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHP 649

Query: 694 DMNIIRGMLEWLNMKSRKA-GYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPP 752
           + N I   L  ++ + + A GY  D   VL D+ E++KE  L VHSEKLA+A+ L  +  
Sbjct: 650 ESNKIYEKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKEHALAVHSEKLAIAYGLLHLDS 709

Query: 753 SSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
              IRI+KNLR+C DCH  IK+ISK+  REII+RD +RFHHF+DG CSC DFW
Sbjct: 710 KEAIRIVKNLRVCRDCHHVIKLISKVYGREIIVRDRNRFHHFEDGECSCLDFW 762



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 175/338 (51%), Gaps = 10/338 (2%)

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           ++ A+ IF  +       ++ +I   + +   ++A+ L+  M Q+ + P+  T+  V++A
Sbjct: 145 LAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKA 204

Query: 353 CATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTW 412
           C        G  +H+ VV+ G   D ++ ++L+ +YA    +  + +LF     R+ V+W
Sbjct: 205 CNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSW 264

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
           N MI GYV+  E+G A ++F +M+   V    +++++++   A +  ++   ++      
Sbjct: 265 NAMIDGYVKHVEMGHARMVFDRMVCRDV----ISWNTMINGYAIVGKIDEAKRL----FD 316

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
              + ++V  N+++  + KCG++ DA  +F  M   + VSWN+M++ Y+  G   E L +
Sbjct: 317 EMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALAL 376

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
           FD M+  G +P   T V +LSAC++ G L++G  +  + + +  IE      T++V +  
Sbjct: 377 FDQMRAVGVKPTEATVVSLLSACAHLGALDKG-LHLHTYINDNRIEVNSIVGTALVDMYA 435

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
           + G +  A ++   +  +  V+ W  ++    IH NV+
Sbjct: 436 KCGKISLATQVFNAMESK-DVLAWNTIIAGMAIHGNVK 472



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 160/352 (45%), Gaps = 37/352 (10%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D+ + N +++ YVK   +  A  +FD M  R+ IS+ T I GY +  +  EA  LF    
Sbjct: 260 DVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFD--- 316

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFA---CVYKLGHDSNAFVGTALIDAFSVCG 206
            E  E N  ++ + L   V  G  E    +F+   C        +     +++  ++ CG
Sbjct: 317 -EMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPC-------RDVVSWNSMLACYAQCG 368

Query: 207 CVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHG 266
                             EAL  F QMRAVG KP   T   +L AC  L  +      H 
Sbjct: 369 KP---------------NEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHT 413

Query: 267 CALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSID 326
                  E++  V  AL+D+Y K G+IS A ++F  M  KDV+ W+ +IA  A      +
Sbjct: 414 YINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKE 473

Query: 327 AVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ-IHSLVVRVGLLSDVFVSNALM 385
           A +LF  M++A V PN  TFV++L AC+    +D G + +  +    G+   V     ++
Sbjct: 474 AQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVI 533

Query: 386 DVYAKCGRMENSVELFAESPKRNHVT------WNTMIVGYVQLGE-VGKAMI 430
           D+ A+ G +E ++EL    P   + +          I G  +LGE VGK +I
Sbjct: 534 DLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLI 585



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 112/266 (42%), Gaps = 50/266 (18%)

Query: 88  CLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFST 147
           C D+ + N ++N Y  + ++ +A +LFDEMPERN +S+ + + G+       +A GLFS 
Sbjct: 289 CRDVISWNTMINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLAGFVKCGNVEDAFGLFSE 348

Query: 148 LH-RE--------------GHELNPFA-FTAFLKVLVSMGWAELCPCVFACVYKLGHDS- 190
           +  R+              G      A F     V V    A +   + AC +    D  
Sbjct: 349 MPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKG 408

Query: 191 --------------NAFVGTALIDAFSVCGCVEFARKVFDGL----------------FN 220
                         N+ VGTAL+D ++ CG +  A +VF+ +                 +
Sbjct: 409 LHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIH 468

Query: 221 DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
              +EA   F +M+  G +PN+ TF  +L AC     +   +    C + + Y ++  V 
Sbjct: 469 GNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDC-MSSSYGIEPKVE 527

Query: 281 --VALLDLYTKSGEISNARRIFEEMP 304
               ++DL  ++G +  A  +   MP
Sbjct: 528 HYGCVIDLLARAGFLEEAMELIGTMP 553


>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 244/729 (33%), Positives = 368/729 (50%), Gaps = 119/729 (16%)

Query: 189 DSNAFVGTALIDAFSVCGCVEFARKVFDGL------------------FNDCFEEALNFF 230
           + +A   T LI A+   G +E  R++F+G                    N     AL  F
Sbjct: 76  NPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELF 135

Query: 231 SQMRAVGFKPNNFTFAFVLKACL---------GLDTIRVAKSAHGCALKTCYEMDLYVAV 281
             MR   F+P++FTF  VL A +         G     V K+  GC   +       V  
Sbjct: 136 RAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSS-------VLN 188

Query: 282 ALLDLYTKSGE--------ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELF-- 331
           ALL +Y K           + +AR++F+EMPK+D + W+ MI  Y + D    A E+F  
Sbjct: 189 ALLSVYVKRASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEA 248

Query: 332 ----------------------------CR-MRQAFVAPNQFTFVSVLQACATMEGLDLG 362
                                       CR MR   +  +  T+ +++ ACA +    +G
Sbjct: 249 MVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMG 308

Query: 363 NQIHSLVVRVGLLSD----VFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
            Q+H+ +++  L  +    + VSNAL+ +Y K  +++ + ++F   P RN +TWN ++ G
Sbjct: 309 KQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSG 368

Query: 419 YVQLGEVGKA-------------------------------MIMFSKMLEEQVPATEVTY 447
           YV  G + +A                               + +F +M  +     +  +
Sbjct: 369 YVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAF 428

Query: 448 SSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND 507
           +  L AC+ L ALE G Q+H   V   Y+  + V NA+I MYAKCG +  A  VF  M  
Sbjct: 429 AGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPS 488

Query: 508 WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAY 567
            + VSWN+MI+    HG   + +++FD M + G  P+ +TF+ VL+ACS+ GL+E+G  Y
Sbjct: 489 VDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHY 548

Query: 568 FKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
           F SM+ +YGI PC +HY  MV L  RAG    A  +I+ +P +P   +W ALL  C IH 
Sbjct: 549 FNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHG 608

Query: 628 NVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWI 676
           N+++G  +A+ +    P+++ T+VLLSNIYA    W           ++A  KEP  SWI
Sbjct: 609 NMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACSWI 668

Query: 677 ENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWV 736
           E +  VH F   D  H ++  +   LE L ++ +K GYIPD   VL D+  ++KE  L  
Sbjct: 669 EVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALST 728

Query: 737 HSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQD 796
           HSEKLA+ F + K+PP + +R+ KN+RIC DCH A K +SK+ +REII+RD  RFHHF++
Sbjct: 729 HSEKLAVGFGIMKLPPGATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKN 788

Query: 797 GCCSCGDFW 805
           G CSC D+W
Sbjct: 789 GDCSCRDYW 797



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 148/552 (26%), Positives = 245/552 (44%), Gaps = 113/552 (20%)

Query: 49  FSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKG-NCLDLFATNVLLNVYVK---- 103
           F   +F   S  ++L   + N+  Q    +HC V+K G  C+     N LL+VYVK    
Sbjct: 143 FRPDDFTFTSVLSALVLFVGNE--QQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASE 200

Query: 104 ----LNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFA 159
                + +  A KLFDEMP+R+ +++ T I GY  +     A  +F              
Sbjct: 201 LGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFE------------- 247

Query: 160 FTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF 219
                                A V  LG   NA     +I  +  CGC            
Sbjct: 248 ---------------------AMVENLGAAWNA-----MISGYVHCGC------------ 269

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT----CYEM 275
              F+EAL    +MR +G + ++ T+  ++ AC  + + ++ K  H   LK      +  
Sbjct: 270 ---FQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSF 326

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPW------------------------ 311
            L V+ AL+ LY K+ ++  AR+IF  MP +++I W                        
Sbjct: 327 CLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMP 386

Query: 312 -------SFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
                  + MI+  AQ     + ++LF +MR     P  F F   L AC+ +  L+ G Q
Sbjct: 387 VKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQ 446

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
           +H+ +V +G  S + V NA++ +YAKCG +E +  +F   P  + V+WN+MI    Q G 
Sbjct: 447 LHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGH 506

Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN- 483
             KA+ +F +ML+E V    +T+ +VL AC+    +E G   +  ++  +Y +     + 
Sbjct: 507 GVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRH-YFNSMLESYGITPCEDHY 565

Query: 484 -ALIDMYAKCGSITDARLVFDMM-NDWNEVSWNAMISGYSMHG---LSAEVL-KVFDLMQ 537
             ++D++ + G  + AR+V D M +      W A+++G  +HG   L  E   ++F LM 
Sbjct: 566 ARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMP 625

Query: 538 QRGWRPNNLTFV 549
           Q     N+ T+V
Sbjct: 626 Q-----NDGTYV 632



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 129/495 (26%), Positives = 212/495 (42%), Gaps = 113/495 (22%)

Query: 245 FAFVLKACLGLD--TIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEE 302
           +A  L+ C   D  +  +A++ H   + + ++   +    LL++Y KS  +  AR++FEE
Sbjct: 14  YAEKLQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEE 73

Query: 303 MPKKDVIP---------------------------------WSFMIARYAQTDLSIDAVE 329
           +P  D I                                  ++ MI  YA       A+E
Sbjct: 74  IPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALE 133

Query: 330 LFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGL-LSDVFVSNALMDV 387
           LF  MR+    P+ FTF SVL A     G +    Q+H  VV+ G+      V NAL+ V
Sbjct: 134 LFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSV 193

Query: 388 YAK--------CGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ 439
           Y K        C  M ++ +LF E PKR+ +TW TMI GYV+  ++  A  +F  M+E  
Sbjct: 194 YVKRASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENL 253

Query: 440 VPA-------------------------------TEVTYSSVLRACASLAALEPGMQVHC 468
             A                                ++TY++++ ACA++ + + G QVH 
Sbjct: 254 GAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHA 313

Query: 469 LTVK----ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY---- 520
             +K     N+   + V+NALI +Y K   + +AR +F  M   N ++WNA++SGY    
Sbjct: 314 YILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAG 373

Query: 521 ---------------------------SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLS 553
                                      + +G   E LK+F  M+  G+ P +  F G L+
Sbjct: 374 RMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALT 433

Query: 554 ACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSV 613
           ACS  G LE G      +V + G E  +    +M+S+  + G ++ A  +   +P    +
Sbjct: 434 ACSVLGALENGRQLHAQLV-HLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMP-SVDL 491

Query: 614 MIWRALLGACIIHNN 628
           + W +++ A   H +
Sbjct: 492 VSWNSMIAALGQHGH 506


>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
          Length = 665

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 243/658 (36%), Positives = 344/658 (52%), Gaps = 88/658 (13%)

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           +R V F P+        K+C    T+ +A++ H  A  +    D +VA +LL  Y + G 
Sbjct: 11  LRHVSFPPDPHLLPTAFKSC---PTLPLARALHAVAEVSGLARDPFVASSLLHAYLRLGT 67

Query: 293 ISNARRIFEEMPK--KDVIPWSFMIARYAQTDLSIDAVELFCRMRQ-AFVAPNQFTFVSV 349
             NAR +F+ MP+  + V+ WS ++A +A    +  A  L   MR+   V PN  T+  +
Sbjct: 68  TGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGL 127

Query: 350 LQ-------------ACATMEG-----------------------LDLGNQIHSLVVRVG 373
           +              A ATM G                       + +G Q+H   V+ G
Sbjct: 128 VSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAG 187

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESP---------------------------- 405
             +D  V  AL+D+Y KCG+    V +F ES                             
Sbjct: 188 CRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFK 247

Query: 406 -------KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
                  + N V+W +++   VQ G+  +A+  F +M  +      VT   VL A A++A
Sbjct: 248 EFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVA 307

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           AL  G   HC  ++  +  DV V++AL+DMYAKCG + DAR++FD M   N VSWNAMI 
Sbjct: 308 ALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIG 367

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           GY+M+G +   + +F  M +   +P+ +TF  +L+AC+  GL E+G  YFK M   YG+ 
Sbjct: 368 GYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVS 427

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P +EHY  MV+LLGRAG LD+A  LI  +PF+P   IW +LLG+C +H NV++  ++A+ 
Sbjct: 428 PRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEK 487

Query: 639 ILDFEPEDEATHVLLSNIYAMARSWEK-----------AASKEPGLSWIENQGMVHYFRA 687
           +   EPE+   +VLLSNIYA  + W++              KE G SWIE +  VH   A
Sbjct: 488 LFHLEPENAGNYVLLSNIYASKKMWDRVNRVREMMKDVGLKKEKGCSWIEIKNKVHMLLA 547

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFAL 747
           GD SH  M  I   +  LN++ RK G++P    VL DV E EK+  L VHSEKLA+A  L
Sbjct: 548 GDDSHPMMTAIIEKINQLNIQMRKLGFVPSTDFVLHDVEEQEKDDILAVHSEKLAVALGL 607

Query: 748 FKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
               P + +R+IKNLRIC DCH A+K IS    REI +RD +RFHHF  G CSCGDFW
Sbjct: 608 ISTSPGTTLRVIKNLRICGDCHEAMKFISSFEGREISVRDTNRFHHFSGGKCSCGDFW 665



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 115/472 (24%), Positives = 191/472 (40%), Gaps = 108/472 (22%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           + H   T+ +SC     L  A  +H      G   D F  + LL+ Y++L    +A  LF
Sbjct: 19  DPHLLPTAFKSC---PTLPLARALHAVAEVSGLARDPFVASSLLHAYLRLGTTGNARALF 75

Query: 115 DEMP--------------------------------------ERNTISFVTTIQGYTVSS 136
           D MP                                      E N I++   + G   S 
Sbjct: 76  DGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRSG 135

Query: 137 QFVEAVGLFSTLHREGHELNPFA--FTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFV 194
           +  +AV   +T+H EG  L P A   +  L  +  +G   +   +     K G  ++A V
Sbjct: 136 RARDAVVALATMHGEG-LLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACV 194

Query: 195 GTALIDAFSVCGCVEFARKVFDG---------------------------LFND------ 221
            TALID +  CG      +VFD                            LF +      
Sbjct: 195 VTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGV 254

Query: 222 -------------CFE-----EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKS 263
                        C +     EA+ FF +M+A G +PN+ T   VL A   +  +   +S
Sbjct: 255 ELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRS 314

Query: 264 AHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDL 323
           AH  AL+  +  D+YV+ AL+D+Y K G + +AR IF+ M  ++V+ W+ MI  YA    
Sbjct: 315 AHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGE 374

Query: 324 SIDAVELFCRMRQAFVAPNQFTFVSVLQACA----TMEGLDLGNQIHSLVVRVGLLSDVF 379
           +++AV +F  M +    P+  TF  +L AC     T EG     ++H+     G+   + 
Sbjct: 375 AVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHN---EYGVSPRME 431

Query: 380 VSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTM-----IVGYVQLGEV 425
               ++ +  + G+++ + +L ++ P + +   W ++     + G V L EV
Sbjct: 432 HYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLAEV 483



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 81/365 (22%), Positives = 144/365 (39%), Gaps = 72/365 (19%)

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
           +     +H   +K G   D      L+++Y K  +  +  ++FDE    +  S    I G
Sbjct: 173 VSVGQQLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAG 232

Query: 132 YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG--------WAEL-------- 175
            + ++Q  EA+ LF      G ELN  ++T+ +   V  G        + E+        
Sbjct: 233 LSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPN 292

Query: 176 ---CPCV---FACVYKLGHDSNA-------------FVGTALIDAFSVCGCVEFARKVFD 216
               PCV   FA V  L H  +A             +V +AL+D ++ CG V+ AR +FD
Sbjct: 293 SVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFD 352

Query: 217 GLFND-------------CFEEALN---FFSQMRAVGFKPNNFTFAFVLKACL------- 253
            + +               + EA+N    F  M     KP+  TF  +L AC        
Sbjct: 353 TMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEE 412

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWS 312
           G    +   + +G + +    M+ Y    ++ L  ++G++  A  +  +MP + D   W 
Sbjct: 413 GRHYFKEMHNEYGVSPR----MEHY--ACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWG 466

Query: 313 FMIAR---YAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
            ++     +   DL+  A E    +       N   +V +    A+ +  D  N++  ++
Sbjct: 467 SLLGSCRVHGNVDLAEVAAEKLFHLE----PENAGNYVLLSNIYASKKMWDRVNRVREMM 522

Query: 370 VRVGL 374
             VGL
Sbjct: 523 KDVGL 527


>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
          Length = 698

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 240/663 (36%), Positives = 365/663 (55%), Gaps = 48/663 (7%)

Query: 187 GHDSNAFVGTALIDAFSVCGCVEFARKVF--------------------DGLFNDCFEEA 226
           G  ++ FV TAL+D +  C C+  A  +F                     G+++      
Sbjct: 40  GLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHL 99

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD---------- 276
           L+   QM+    +PN  T   +L        +    S H   ++ C   +          
Sbjct: 100 LSM--QMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDG 157

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           + +  ALLD+Y K G +  ARR+F+ MP ++ + WS +I  +        A  LF  M  
Sbjct: 158 VLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLA 217

Query: 337 ---AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
               F++P   +  S L+ACA+++ L +G Q+H+L+ + G+ +D+   N+L+ +YAK G 
Sbjct: 218 QGLCFLSPT--SIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGL 275

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           ++ ++ LF E   ++ V+++ ++ GYVQ G   +A ++F KM    V     T  S++ A
Sbjct: 276 IDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPA 335

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
           C+ LAAL+ G   H   +      +  + NALIDMYAKCG I  +R VF+MM   + VSW
Sbjct: 336 CSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSW 395

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA 573
           N MI+GY +HGL  E   +F  M   G+ P+ +TF+ +LSACS+ GL+ +G+ +F  M  
Sbjct: 396 NTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGH 455

Query: 574 NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGR 633
            YG+ P +EHY  MV LL R G LD+A + I+ +P +  V +W ALLGAC ++ N+++G+
Sbjct: 456 GYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGK 515

Query: 634 LSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMV 682
             ++ I +  PE     VLLSNIY+ A  +++AA            K PG SWIE  G +
Sbjct: 516 KVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSL 575

Query: 683 HYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLA 742
           H F  GD SH     I   L+ + +  +K GY PD S VL+D+ E+EKE+ L  HSEKLA
Sbjct: 576 HAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLA 635

Query: 743 LAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCG 802
           +A+ +  +     I + KNLR+C DCHT IK IS + +R II+RD +RFHHF++G CSCG
Sbjct: 636 IAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCG 695

Query: 803 DFW 805
           DFW
Sbjct: 696 DFW 698



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 128/401 (31%), Positives = 207/401 (51%), Gaps = 15/401 (3%)

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           PNN+TF F LKAC  L      ++ H  A+    + DL+V+ ALLD+Y K   + +A  I
Sbjct: 8   PNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHI 67

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVE--LFCRMRQAFVAPNQFTFVSVLQACATME 357
           F  MP +D++ W+ M+A YA   +   AV   L  +M+   + PN  T V++L   A   
Sbjct: 68  FATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQG 127

Query: 358 GLDLGNQIHSLVVRVGL---------LSD-VFVSNALMDVYAKCGRMENSVELFAESPKR 407
            L  G  +H+  +R  L         L+D V +  AL+D+YAKCG +  +  +F   P R
Sbjct: 128 ALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR 187

Query: 408 NHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVP-ATEVTYSSVLRACASLAALEPGMQV 466
           N VTW+ +I G+V    + +A ++F  ML + +   +  + +S LRACASL  L  G Q+
Sbjct: 188 NEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQL 247

Query: 467 HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLS 526
           H L  K+    D+   N+L+ MYAK G I  A  +FD M   + VS++A++SGY  +G +
Sbjct: 248 HALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRA 307

Query: 527 AEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTS 586
            E   VF  MQ     P+  T V ++ ACS+   L+ G     S++   G+        +
Sbjct: 308 EEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR-GLASETSICNA 366

Query: 587 MVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
           ++ +  + G +D + ++   +P +  ++ W  ++    IH 
Sbjct: 367 LIDMYAKCGRIDLSRQVFNMMPSR-DIVSWNTMIAGYGIHG 406



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 136/432 (31%), Positives = 215/432 (49%), Gaps = 33/432 (7%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N++++  +L++C    D      IH   +  G   DLF +  LL++YVK   LPDA  +F
Sbjct: 9   NNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIF 68

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFT--AFLKVL----- 167
             MP R+ +++   + GY     +  AV    ++  + H L P A T  A L +L     
Sbjct: 69  ATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGA 128

Query: 168 VSMGWAELCPCVFACVY-----KLGHDSNAFVGTALIDAFSVCGCVEFARKVFD------ 216
           ++ G +    C+ AC++     K        +GTAL+D ++ CG + +AR+VFD      
Sbjct: 129 LAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARN 188

Query: 217 --------GLFNDC--FEEALNFFSQMRAVG---FKPNNFTFAFVLKACLGLDTIRVAKS 263
                   G F  C    +A   F  M A G     P   + A  L+AC  LD +R+ + 
Sbjct: 189 EVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASLDHLRMGEQ 246

Query: 264 AHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDL 323
            H    K+    DL    +LL +Y K+G I  A  +F+EM  KD + +S +++ Y Q   
Sbjct: 247 LHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGR 306

Query: 324 SIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNA 383
           + +A  +F +M+   V P+  T VS++ AC+ +  L  G   H  V+  GL S+  + NA
Sbjct: 307 AEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNA 366

Query: 384 LMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPAT 443
           L+D+YAKCGR++ S ++F   P R+ V+WNTMI GY   G   +A  +F +M     P  
Sbjct: 367 LIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPD 426

Query: 444 EVTYSSVLRACA 455
            VT+  +L AC+
Sbjct: 427 GVTFICLLSACS 438



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/290 (31%), Positives = 147/290 (50%), Gaps = 18/290 (6%)

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           VAPN +TF   L+AC+ +     G  IH   +  GL +D+FVS AL+D+Y KC  + ++ 
Sbjct: 6   VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAA 65

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAM--IMFSKMLEEQVPATEVTYSSVLRACAS 456
            +FA  P R+ V WN M+ GY   G    A+  ++  +M   ++     T  ++L   A 
Sbjct: 66  HIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQ 125

Query: 457 LAALEPGMQVHCLTVKANYDMD----------VVVANALIDMYAKCGSITDARLVFDMMN 506
             AL  G  VH   ++A    +          V++  AL+DMYAKCGS+  AR VFD M 
Sbjct: 126 QGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMP 185

Query: 507 DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG---WRPNNLTFVGVLSACSNGGLLEQ 563
             NEV+W+A+I G+ +     +   +F  M  +G     P ++     L AC++   L  
Sbjct: 186 ARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASLDHLRM 243

Query: 564 GEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSV 613
           GE    +++A  G+   +    S++S+  +AG +D+A  L + +  + +V
Sbjct: 244 GEQ-LHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTV 292



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 22/207 (10%)

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGS 494
           ML  +V     T+   L+AC++LA    G  +H   + A    D+ V+ AL+DMY KC  
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 495 ITDARLVFDMMNDWNEVSWNAMISGYSMHGL-SAEVLKVFDL-MQQRGWRPNNLTFVGVL 552
           + DA  +F  M   + V+WNAM++GY+ HG+    V  +  + MQ    RPN  T V +L
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHY--------------TSMVSLLGRAGHLD 598
              +  G L QG +     V  Y I  C+                 T+++ +  + G L 
Sbjct: 121 PLLAQQGALAQGTS-----VHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLL 175

Query: 599 KAAKLIEGIPFQPSVMIWRALLGACII 625
            A ++ + +P +  V  W AL+G  ++
Sbjct: 176 YARRVFDAMPARNEV-TWSALIGGFVL 201



 Score = 47.4 bits (111), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 52/112 (46%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E ++ +  + + +C     LQ     H  V+ +G   +    N L+++Y K  R+  + +
Sbjct: 323 EPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQ 382

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFL 164
           +F+ MP R+ +S+ T I GY +     EA  LF  ++  G   +   F   L
Sbjct: 383 VFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLL 434


>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 254/728 (34%), Positives = 394/728 (54%), Gaps = 53/728 (7%)

Query: 91  LFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHR 150
           + + N L+  Y +L ++  A  +FDEM ++N IS+ + + GY  + +  EA  +F  +  
Sbjct: 98  IISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMS- 156

Query: 151 EGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEF 210
              E N  ++   +   ++ G       VF  +     + N    TA++  +        
Sbjct: 157 ---ERNTISWNGLVSGYINNGMINEAREVFDRM----PERNVVSWTAMVRGY-------- 201

Query: 211 ARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCAL- 269
              V +G+ +    EA   F QM     + N  ++  +L   L    I  A     C L 
Sbjct: 202 ---VKEGMIS----EAETLFWQMP----EKNVVSWTVMLGGLLQEGRIDEA-----CRLF 245

Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVE 329
               E D+     ++  Y + G +  AR +F+EMP+++V+ W+ MI  Y Q      A +
Sbjct: 246 DMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARK 305

Query: 330 LFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYA 389
           LF    +     N+ ++ ++L+       LD  +++ + +     +  V   NA++  + 
Sbjct: 306 LF----EVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMP----IKSVVACNAMILCFG 357

Query: 390 KCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSS 449
           + G +  + ++F +  +++  TW+ MI  Y + G    A+ +F  M  E +     +  S
Sbjct: 358 QNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLIS 417

Query: 450 VLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWN 509
           VL  CA LA L+ G ++H   V++ +D+DV VA+ L+ MY KCG++  A+ VFD     +
Sbjct: 418 VLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKD 477

Query: 510 EVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFK 569
            V WN++I+GY+ HGL  E L+VF  M   G  P+++TFVGVLSACS  G +++G   F 
Sbjct: 478 VVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFN 537

Query: 570 SMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNV 629
           SM   Y +E  IEHY  MV LLGRAG L++A  LIE +P +   +IW ALLGAC  H  +
Sbjct: 538 SMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKL 597

Query: 630 EIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIEN 678
           ++  ++A+ +L  EP++    +LLSNIYA    W+  A           SK PG SWI  
Sbjct: 598 DLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVV 657

Query: 679 QGMVHYFRAGDTS-HADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVH 737
           +  VH F  GD+S H + + I  +LEWL+   R+AGY PD S VL DV E+EK + L  H
Sbjct: 658 EKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYH 717

Query: 738 SEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDG 797
           SEKLA+A+ L K+P   PIR++KNLR+C DCH AIK+I+K+  REII+RD +RFHHF+DG
Sbjct: 718 SEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDG 777

Query: 798 CCSCGDFW 805
            CSC D+W
Sbjct: 778 SCSCRDYW 785



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 183/393 (46%), Gaps = 30/393 (7%)

Query: 42  STTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVY 101
           S    + + + E N  S+   L   +Q   +  A    C++       D+     ++  Y
Sbjct: 208 SEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEA----CRLFDMMPEKDVVTRTNMIGGY 263

Query: 102 VKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFT 161
            ++ RL +A  LFDEMP RN +S+ T I GY  + Q   A  LF  +     E N  ++T
Sbjct: 264 CQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMP----EKNEVSWT 319

Query: 162 AFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND 221
           A LK   + G  +    +F  +       +     A+I  F   G V  AR+VFD +   
Sbjct: 320 AMLKGYTNCGRLDEASELFNAM----PIKSVVACNAMILCFGQNGEVPKARQVFDQMREK 375

Query: 222 ----------CFE------EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAH 265
                      +E      +AL  F  M+  G +PN  +   VL  C GL  +   +  H
Sbjct: 376 DEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIH 435

Query: 266 GCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSI 325
              +++ +++D+YVA  LL +Y K G ++ A+++F+    KDV+ W+ +I  YAQ  L +
Sbjct: 436 AQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGV 495

Query: 326 DAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI-HSLVVRVGLLSDVFVSNAL 384
           +A+ +F  M  + + P+  TFV VL AC+    +  G +I +S+  +  +   +     +
Sbjct: 496 EALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACM 555

Query: 385 MDVYAKCGRMENSVELFAESP-KRNHVTWNTMI 416
           +D+  + G++  +++L  + P + + + W  ++
Sbjct: 556 VDLLGRAGKLNEAMDLIEKMPMEADAIIWGALL 588


>gi|224136143|ref|XP_002322250.1| predicted protein [Populus trichocarpa]
 gi|222869246|gb|EEF06377.1| predicted protein [Populus trichocarpa]
          Length = 548

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 215/544 (39%), Positives = 331/544 (60%), Gaps = 12/544 (2%)

Query: 273 YEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFC 332
           +E D Y+   +L ++ K G + +ARR+F+EMP+++++ W+ +I+        ++A  LF 
Sbjct: 6   FEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRLFL 65

Query: 333 RMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCG 392
            M + F     FTF  +++A A +E + +G Q+H+  +++G+  D+FVS AL+D+Y+KCG
Sbjct: 66  NMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMYSKCG 125

Query: 393 RMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLR 452
            +E++  +F E P++  V WNT+I GY   G   +A+ M+ +M +  V     T+S ++R
Sbjct: 126 SIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTFSMIVR 185

Query: 453 ACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS 512
            CA LA++E   Q H   ++  +  D+V   AL+D Y+K G I DAR VFD M   N +S
Sbjct: 186 ICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMASKNVIS 245

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
           WNA+I GY  HG  +E +++F+ M Q    PN++TF+ VLSACS+ GL E+G   F+SM 
Sbjct: 246 WNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERGWEIFQSMG 305

Query: 573 ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIG 632
            +  I+P   HY  M+ L+GR G LD+A  LI G PF+P+  +W ALL AC ++ N E+G
Sbjct: 306 RDNRIKPRAMHYACMIELMGREGLLDEALALIRGAPFKPTANMWAALLTACRVNENFELG 365

Query: 633 RLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----KEPGL------SWIENQGM 681
           + +A+ +   EP+    +++L NIY  A + ++AA      K  GL      SWIE +  
Sbjct: 366 KFAAEKLYGMEPDKLNNYIVLLNIYNSAGNLKEAADVVHTLKRKGLRMRPVCSWIEVKRR 425

Query: 682 VHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKL 741
            H F +GD  H     I   ++ L ++  K GY+P+   +L DV E E ER    HSEKL
Sbjct: 426 PHVFLSGDNRHPQRKEIYQKVDKLMLEISKYGYVPNQKTLLPDVDEQE-ERVRLYHSEKL 484

Query: 742 ALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSC 801
           A+AF L   P  +P++I++  RIC DCH AIK+I+++  REI+IRD  RFHHF+ G CSC
Sbjct: 485 AIAFGLISTPYWAPLQIVQGHRICGDCHEAIKLIARVTGREIVIRDAGRFHHFKHGHCSC 544

Query: 802 GDFW 805
            D+W
Sbjct: 545 EDYW 548



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 97/289 (33%), Positives = 152/289 (52%), Gaps = 16/289 (5%)

Query: 82  VLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEA 141
           ++  G   D +  N +L ++VK   + DA +LFDEMPERN +S+ T I G      F+EA
Sbjct: 1   MIDNGFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEA 60

Query: 142 VGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDA 201
             LF  +  E  +   F F   ++    +    +   + AC  K+G   + FV  ALID 
Sbjct: 61  FRLFLNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDM 120

Query: 202 FSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTF 245
           +S CG +E AR VF+ +                 +   EEAL+ + +MR  G K ++FTF
Sbjct: 121 YSKCGSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTF 180

Query: 246 AFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPK 305
           + +++ C  L ++  AK AH   ++  +  D+    AL+D Y+K G I +AR +F++M  
Sbjct: 181 SMIVRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMAS 240

Query: 306 KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
           K+VI W+ +I  Y       +AVELF +M Q  + PN  TF++VL AC+
Sbjct: 241 KNVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACS 289



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/250 (33%), Positives = 141/250 (56%), Gaps = 2/250 (0%)

Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMF 432
           G   D ++ N ++ ++ KCG M ++  LF E P+RN V+WNT+I G V +G+  +A  +F
Sbjct: 5   GFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRLF 64

Query: 433 SKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKC 492
             M EE   A   T++ ++RA A L  +  G Q+H  T+K     D+ V+ ALIDMY+KC
Sbjct: 65  LNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMYSKC 124

Query: 493 GSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL 552
           GSI DAR VF+ M +   V WN +I+GY++HG S E L ++  M+  G + ++ TF  ++
Sbjct: 125 GSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTFSMIV 184

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
             C+    +E  +    +++  +G    I   T++V    + G ++ A  + + +    +
Sbjct: 185 RICARLASVEHAKQAHAALI-RHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMA-SKN 242

Query: 613 VMIWRALLGA 622
           V+ W AL+G 
Sbjct: 243 VISWNALIGG 252



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/333 (23%), Positives = 135/333 (40%), Gaps = 59/333 (17%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           S+  S ++A  +++    + +     +H   LK G   D+F +  L+++Y K   + DA 
Sbjct: 72  SDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMYSKCGSIEDAR 131

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
            +F+EMPE+ T+ + T I GY +     EA+ ++  +   G +++ F F+  +++   + 
Sbjct: 132 FVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTFSMIVRICARLA 191

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF-------- 223
             E      A + + G  S+    TAL+D +S  G +E AR VFD + +           
Sbjct: 192 SVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMASKNVISWNALIG 251

Query: 224 --------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
                    EA+  F QM      PN+ TF  VL AC                       
Sbjct: 252 GYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSAC----------------------- 288

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIP-----WSFMIARYAQTDLSIDAVEL 330
                       + SG       IF+ M + + I      ++ MI    +  L  +A+ L
Sbjct: 289 ------------SHSGLSERGWEIFQSMGRDNRIKPRAMHYACMIELMGREGLLDEALAL 336

Query: 331 FCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
              +R A   P    + ++L AC   E  +LG 
Sbjct: 337 ---IRGAPFKPTANMWAALLTACRVNENFELGK 366


>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
 gi|194695290|gb|ACF81729.1| unknown [Zea mays]
          Length = 539

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 209/534 (39%), Positives = 318/534 (59%), Gaps = 11/534 (2%)

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+  Y K+G++  AR++F+EMP ++V  W+ M+A    + L+ +++  F  MR+  + P+
Sbjct: 6   LIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPD 65

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           ++   S+ + CA +  +  G Q+H+ VVR GL  D+ V ++L  +Y +CG + +      
Sbjct: 66  EYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALR 125

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
             P  N V+ NT I G  Q G+   A+  F  M    V A  VT+ S + +C+ LAAL  
Sbjct: 126 ALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQ 185

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G Q+H L +K   D  V V  +L+ MY++CG + D+  V    +  + V  +AMIS Y  
Sbjct: 186 GQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGF 245

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
           HG   + + +F  M   G  PN +TF+ +L ACS+ GL ++G   F+ M   YG++P ++
Sbjct: 246 HGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVK 305

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDF 642
           HYT +V LLGR+G L++A  LI  +P QP  +IW+ LL AC      ++    A+ +++ 
Sbjct: 306 HYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIEL 365

Query: 643 EPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTS 691
           +P D A++VLLSNI A +  WE  +            KEPG+SW+E +G +H F  GD S
Sbjct: 366 DPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGDES 425

Query: 692 HADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMP 751
           H+    I   LE +  + R+ GY PD+S V  D+ ++EKE  L  HSEKLA+AFA   +P
Sbjct: 426 HSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFLSLP 485

Query: 752 PSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
              PIR++KNLR+C DCH AIK++SK++ REI++RDV RFHHF+DG CSCGD+W
Sbjct: 486 EGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 539



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 167/360 (46%), Gaps = 27/360 (7%)

Query: 198 LIDAFSVCGCVEFARKVFD---------------GLFNDCF-EEALNFFSQMRAVGFKPN 241
           LI  +   G +E ARK+FD               GL N    EE+L FF  MR  G +P+
Sbjct: 6   LIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPD 65

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
            +    + + C GL  +   +  H   +++  + D+ V  +L  +Y + G + +      
Sbjct: 66  EYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALR 125

Query: 302 EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL 361
            +P  +++  +  I+   Q   +  A+E FC MR A V  N  TFVS + +C+ +  L  
Sbjct: 126 ALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQ 185

Query: 362 GNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQ 421
           G QIH+L ++ G+   V V  +L+ +Y++CG + +S  +  E    + V  + MI  Y  
Sbjct: 186 GQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGF 245

Query: 422 LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVV 481
            G   KA+ +F +M+       EVT+ ++L AC+     + GM    L  K  Y +   V
Sbjct: 246 HGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTK-TYGLQPSV 304

Query: 482 AN--ALIDMYAKCGSITDAR-LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
            +   ++D+  + G + +A  L+  M    + V W  ++S       + +  K FD+ ++
Sbjct: 305 KHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLS-------ACKTQKKFDMAER 357



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 150/340 (44%), Gaps = 18/340 (5%)

Query: 95  NVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHE 154
           N+L+  YVK   L  A KLFDEMP RN  ++   + G T S    E++G F  + REG +
Sbjct: 4   NILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQ 63

Query: 155 LNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKV 214
            + +   +  +    +        V A V + G D +  VG++L   +  CG +      
Sbjct: 64  PDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAA 123

Query: 215 FDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTI 258
              L                 N   E AL FF  MR  G + N  TF   + +C  L  +
Sbjct: 124 LRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAAL 183

Query: 259 RVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARY 318
              +  H  A+KT  +  + V  +L+ +Y++ G + ++ R+  E    D++  S MI+ Y
Sbjct: 184 AQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAY 243

Query: 319 AQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV-GLLSD 377
                   AV LF +M  A   PN+ TF+++L AC+     D G     L+ +  GL   
Sbjct: 244 GFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPS 303

Query: 378 VFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMI 416
           V     ++D+  + G +  + +L    P + + V W T++
Sbjct: 304 VKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLL 343



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 110/222 (49%), Gaps = 1/222 (0%)

Query: 382 NALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVP 441
           N L+  Y K G +E + +LF E P RN  TWN M+ G    G   +++  F  M  E + 
Sbjct: 4   NILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQ 63

Query: 442 ATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLV 501
             E    S+ R CA L  +  G QVH   V++  D D+ V ++L  MY +CG + D    
Sbjct: 64  PDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAA 123

Query: 502 FDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLL 561
              +   N VS N  ISG + +G +   L+ F LM+  G   N +TFV  +++CS+   L
Sbjct: 124 LRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAAL 183

Query: 562 EQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKL 603
            QG+    ++    G++  +   TS+V +  R G L  + ++
Sbjct: 184 AQGQQ-IHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERV 224


>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 254/728 (34%), Positives = 394/728 (54%), Gaps = 53/728 (7%)

Query: 91  LFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHR 150
           + + N L+  Y +L ++  A  +FDEM ++N IS+ + + GY  + +  EA  +F  +  
Sbjct: 98  IISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMS- 156

Query: 151 EGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEF 210
              E N  ++   +   ++ G       VF  +     + N    TA++  +        
Sbjct: 157 ---ERNTISWNGLVSGYINNGMINEAREVFDRM----PERNVVSWTAMVRGY-------- 201

Query: 211 ARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCAL- 269
              V +G+ +    EA   F QM     + N  ++  +L   L    I  A     C L 
Sbjct: 202 ---VKEGMIS----EAETLFWQMP----EKNVVSWTVMLGGLLQEGRIDEA-----CRLF 245

Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVE 329
               E D+     ++  Y + G +  AR +F+EMP+++V+ W+ MI  Y Q      A +
Sbjct: 246 DMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARK 305

Query: 330 LFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYA 389
           LF    +     N+ ++ ++L+       LD  +++ + +     +  V   NA++  + 
Sbjct: 306 LF----EVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMP----IKSVVACNAMILCFG 357

Query: 390 KCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSS 449
           + G +  + ++F +  +++  TW+ MI  Y + G    A+ +F  M  E +     +  S
Sbjct: 358 QNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLIS 417

Query: 450 VLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWN 509
           VL  CA LA L+ G ++H   V++ +D+DV VA+ L+ MY KCG++  A+ VFD     +
Sbjct: 418 VLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKD 477

Query: 510 EVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFK 569
            V WN++I+GY+ HGL  E L+VF  M   G  P+++TFVGVLSACS  G +++G   F 
Sbjct: 478 VVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFN 537

Query: 570 SMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNV 629
           SM   Y +E  IEHY  MV LLGRAG L++A  LIE +P +   +IW ALLGAC  H  +
Sbjct: 538 SMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKL 597

Query: 630 EIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIEN 678
           ++  ++A+ +L  EP++    +LLSNIYA    W+  A           SK PG SWI  
Sbjct: 598 DLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVV 657

Query: 679 QGMVHYFRAGDTS-HADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVH 737
           +  VH F  GD+S H + + I  +LEWL+   R+AGY PD S VL DV E+EK + L  H
Sbjct: 658 EKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYH 717

Query: 738 SEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDG 797
           SEKLA+A+ L K+P   PIR++KNLR+C DCH AIK+I+K+  REII+RD +RFHHF+DG
Sbjct: 718 SEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDG 777

Query: 798 CCSCGDFW 805
            CSC D+W
Sbjct: 778 SCSCRDYW 785



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 183/393 (46%), Gaps = 30/393 (7%)

Query: 42  STTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVY 101
           S    + + + E N  S+   L   +Q   +  A    C++       D+     ++  Y
Sbjct: 208 SEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEA----CRLFDMMPEKDVVTRTNMIGGY 263

Query: 102 VKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFT 161
            ++ RL +A  LFDEMP RN +S+ T I GY  + Q   A  LF  +     E N  ++T
Sbjct: 264 CQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMP----EKNEVSWT 319

Query: 162 AFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND 221
           A LK   + G  +    +F  +       +     A+I  F   G V  AR+VFD +   
Sbjct: 320 AMLKGYTNCGRLDEASELFNAM----PIKSVVACNAMILCFGQNGEVPKARQVFDQMREK 375

Query: 222 ----------CFE------EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAH 265
                      +E      +AL  F  M+  G +PN  +   VL  C GL  +   +  H
Sbjct: 376 DEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIH 435

Query: 266 GCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSI 325
              +++ +++D+YVA  LL +Y K G ++ A+++F+    KDV+ W+ +I  YAQ  L +
Sbjct: 436 AQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGV 495

Query: 326 DAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI-HSLVVRVGLLSDVFVSNAL 384
           +A+ +F  M  + + P+  TFV VL AC+    +  G +I +S+  +  +   +     +
Sbjct: 496 EALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACM 555

Query: 385 MDVYAKCGRMENSVELFAESP-KRNHVTWNTMI 416
           +D+  + G++  +++L  + P + + + W  ++
Sbjct: 556 VDLLGRAGKLNEAMDLIEKMPMEADAIIWGALL 588


>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1134

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 226/653 (34%), Positives = 361/653 (55%), Gaps = 35/653 (5%)

Query: 187  GHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFF 230
            G   N      LID +  C     A KVFD +                 N     +L+ F
Sbjct: 399  GSGLNLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLF 458

Query: 231  SQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKS 290
            ++M   G  PN FTF+  LKAC  L+ +      HG  LK  +EM + V  +L+D+Y+K 
Sbjct: 459  TEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKC 518

Query: 291  GEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA--PNQFTFVS 348
            G I+ A ++F  M  + +I W+ MIA Y        A+  F  M++A +   P++FT  S
Sbjct: 519  GRINEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTS 578

Query: 349  VLQACATMEGLDLGNQIHSLVVRVGL--LSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
            +L+AC++   +  G QIH  +VR G    S   ++ +L+D+Y KCG + ++ + F +  +
Sbjct: 579  LLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKE 638

Query: 407  RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
            +  ++W+++I+GY Q G+  +AM +F ++ E          SS++   A  A L+ G Q+
Sbjct: 639  KTMISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQM 698

Query: 467  HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLS 526
              L VK    ++  V+N+L+DMY KCG + +A   F  M   + +SW  MI+GY  HGL 
Sbjct: 699  QALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLG 758

Query: 527  AEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTS 586
             + + +F+ M +    P+ + ++ VLSACS+ G++++GE  F  ++   GI+P +EHY  
Sbjct: 759  KKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYAC 818

Query: 587  MVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPED 646
            +V LLGRAG L +A  L++ +P +P+V IW+ LL  C +H ++E+G+   + +L  + ++
Sbjct: 819  VVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDGKN 878

Query: 647  EATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADM 695
             A +V++SN+Y  A  W            K   KE G+SW+E +  VH+FR+G+ SH   
Sbjct: 879  PANYVMMSNLYGQAGYWNEQGNARELGSIKGLQKEAGMSWVEIEREVHFFRSGEDSHPLT 938

Query: 696  NIIRGMLEWLNMKSRKA-GYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFK---MP 751
             +I+  L+ +  + R+  GY+  L   L D+ ++ KE  L  HSEKLA+  AL       
Sbjct: 939  LVIQETLKEVERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQ 998

Query: 752  PSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
                IR+ KNLR+CVDCH  IK +SKI +   ++RD  RFH F+DGCCSCGD+
Sbjct: 999  KGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1051



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 145/506 (28%), Positives = 245/506 (48%), Gaps = 28/506 (5%)

Query: 86  GNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLF 145
           G+ L+L  +N L+++Y K      A K+FD MPERN +S+   + G+ ++     ++ LF
Sbjct: 399 GSGLNLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLF 458

Query: 146 STLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVC 205
           + + R+G   N F F+  LK    +   E    +     K+G +    VG +L+D +S C
Sbjct: 459 TEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKC 518

Query: 206 GCVEFARKVFDGLFNDCF----------------EEALNFFSQMRAVGFK--PNNFTFAF 247
           G +  A KVF  +                       AL  F  M+    K  P+ FT   
Sbjct: 519 GRINEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTS 578

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV--ALLDLYTKSGEISNARRIFEEMPK 305
           +LKAC     I   K  HG  +++ +       +  +L+DLY K G + +AR+ F+++ +
Sbjct: 579 LLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKE 638

Query: 306 KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
           K +I WS +I  YAQ    ++A+ LF R+++     + F   S++   A    L  G Q+
Sbjct: 639 KTMISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQM 698

Query: 366 HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEV 425
            +LVV++    +  VSN+L+D+Y KCG ++ + + FAE   ++ ++W  MI GY + G  
Sbjct: 699 QALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLG 758

Query: 426 GKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA- 484
            KA+ +F+KML   +   EV Y +VL AC+    ++ G ++    ++       V   A 
Sbjct: 759 KKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYAC 818

Query: 485 LIDMYAKCGSITDARLVFDMMNDWNEVS-WNAMISGYSMHG---LSAEVLKVFDLMQQRG 540
           ++D+  + G + +A+ + D M     V  W  ++S   +HG   L  EV K+  L++  G
Sbjct: 819 VVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKI--LLRIDG 876

Query: 541 WRPNNLTFVGVLSACSNGGLLEQGEA 566
             P N   +  L     G   EQG A
Sbjct: 877 KNPANYVMMSNLYG-QAGYWNEQGNA 901



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 105/424 (24%), Positives = 197/424 (46%), Gaps = 32/424 (7%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +++T+L++C   + L+  + IH   LK G  + +   N L+++Y K  R+ +A K+F
Sbjct: 469 NEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVF 528

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNP--FAFTAFLKVLVSMGW 172
             M  R+ IS+   I GY  +     A+  F  +     +  P  F  T+ LK   S G 
Sbjct: 529 RWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSSTGM 588

Query: 173 AELCPCVFACVYKLGHD--SNAFVGTALIDAFSVCGCVEFARKVFDGLFNDC-------- 222
                 +   + + G    S+A +  +L+D +  CG +  ARK FD +            
Sbjct: 589 IYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSLI 648

Query: 223 --------FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
                   F EA+  F +++ +  + ++F  + ++        ++  K      +K    
Sbjct: 649 LGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSG 708

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
           ++  V+ +L+D+Y K G +  A + F EM  KDVI W+ MI  Y +  L   AV +F +M
Sbjct: 709 LETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFNKM 768

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV-GLLSDVFVSNALMDVYAKCGR 393
            +  + P++  +++VL AC+    +  G ++ S ++   G+   V     ++D+  + GR
Sbjct: 769 LRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGRAGR 828

Query: 394 MENSVELFAESP-KRNHVTWNTMIV-----GYVQLG-EVGKAMIMFSKMLEEQVPATEVT 446
           ++ +  L    P K N   W T++      G ++LG EVGK ++     ++ + PA  V 
Sbjct: 829 LKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILL----RIDGKNPANYVM 884

Query: 447 YSSV 450
            S++
Sbjct: 885 MSNL 888


>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 244/729 (33%), Positives = 368/729 (50%), Gaps = 119/729 (16%)

Query: 189 DSNAFVGTALIDAFSVCGCVEFARKVFDGL------------------FNDCFEEALNFF 230
           + +A   T LI A+   G +E  R++F+G                    N     AL  F
Sbjct: 76  NPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELF 135

Query: 231 SQMRAVGFKPNNFTFAFVLKACL---------GLDTIRVAKSAHGCALKTCYEMDLYVAV 281
             MR   F+P++FTF  VL A +         G     V K+  GC   +       V  
Sbjct: 136 RAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSS-------VLN 188

Query: 282 ALLDLYTKSGE--------ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELF-- 331
           ALL +Y K           + +AR++F+EMPK+D + W+ MI  Y + D    A E+F  
Sbjct: 189 ALLSVYVKRASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEA 248

Query: 332 ----------------------------CR-MRQAFVAPNQFTFVSVLQACATMEGLDLG 362
                                       CR MR   +  +  T+ +++ ACA +    +G
Sbjct: 249 MVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMG 308

Query: 363 NQIHSLVVRVGLLSD----VFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
            Q+H+ +++  L  +    + VSNAL+ +Y K  +++ + ++F   P RN +TWN ++ G
Sbjct: 309 KQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSG 368

Query: 419 YVQLGEVGKA-------------------------------MIMFSKMLEEQVPATEVTY 447
           YV  G + +A                               + +F +M  +     +  +
Sbjct: 369 YVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAF 428

Query: 448 SSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND 507
           +  L AC+ L ALE G Q+H   V   Y+  + V NA+I MYAKCG +  A  VF  M  
Sbjct: 429 AGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPS 488

Query: 508 WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAY 567
            + VSWN+MI+    HG   + +++FD M + G  P+ +TF+ VL+ACS+ GL+E+G  Y
Sbjct: 489 VDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHY 548

Query: 568 FKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
           F SM+ +YGI PC +HY  MV L  RAG    A  +I+ +P +P   +W ALL  C IH 
Sbjct: 549 FNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHG 608

Query: 628 NVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWI 676
           N+++G  +A+ +    P+++ T+VLLSNIYA    W           ++A  KEP  SWI
Sbjct: 609 NMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSWI 668

Query: 677 ENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWV 736
           E +  VH F   D  H ++  +   LE L ++ +K GYIPD   VL D+  ++KE  L  
Sbjct: 669 EVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALST 728

Query: 737 HSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQD 796
           HSEKLA+ F + K+PP + +R+ KN+RIC DCH A K +SK+ +REII+RD  RFHHF++
Sbjct: 729 HSEKLAVGFGIMKLPPDATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKN 788

Query: 797 GCCSCGDFW 805
           G CSC D+W
Sbjct: 789 GDCSCRDYW 797



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 148/552 (26%), Positives = 245/552 (44%), Gaps = 113/552 (20%)

Query: 49  FSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKG-NCLDLFATNVLLNVYVK---- 103
           F   +F   S  ++L   + N+  Q    +HC V+K G  C+     N LL+VYVK    
Sbjct: 143 FRPDDFTFTSVLSALVLFVGNE--QQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASE 200

Query: 104 ----LNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFA 159
                + +  A KLFDEMP+R+ +++ T I GY  +     A  +F              
Sbjct: 201 LGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFE------------- 247

Query: 160 FTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF 219
                                A V  LG   N     A+I  +  CG             
Sbjct: 248 ---------------------AMVENLGAAWN-----AMISGYVHCG------------- 268

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT----CYEM 275
             CF+EAL    +MR +G + ++ T+  ++ AC  + + ++ K  H   LK      +  
Sbjct: 269 --CFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSF 326

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPW------------------------ 311
            L V+ AL+ LY K+ ++  AR+IF  MP +++I W                        
Sbjct: 327 CLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMP 386

Query: 312 -------SFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
                  + MI+  AQ     + ++LF +MR     P  F F   L AC+ +  L+ G Q
Sbjct: 387 VKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQ 446

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
           +H+ +V +G  S + V NA++ +YAKCG +E +  +F   P  + V+WN+MI    Q G 
Sbjct: 447 LHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGH 506

Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN- 483
             KA+ +F +ML+E V    +T+ +VL AC+    +E G   +  ++  +Y +     + 
Sbjct: 507 GVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRH-YFNSMLESYGITPCEDHY 565

Query: 484 -ALIDMYAKCGSITDARLVFDMM-NDWNEVSWNAMISGYSMHG---LSAEVL-KVFDLMQ 537
             ++D++ + G  + AR+V D M +      W A+++G  +HG   L  E   ++F LM 
Sbjct: 566 ARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMP 625

Query: 538 QRGWRPNNLTFV 549
           Q     N+ T+V
Sbjct: 626 Q-----NDGTYV 632


>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Glycine max]
          Length = 780

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 240/678 (35%), Positives = 358/678 (52%), Gaps = 63/678 (9%)

Query: 191 NAFVGTALIDAFSV--CGCVEFARKVFDGL-----------------FNDCFEEALNFFS 231
           + +  + L+ A+++  C C+ +A+ VF+ +                  +D  +  L F  
Sbjct: 103 DPYTASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLH 162

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
            + +    PN FTF F+ KA   L  + +    HG  +K     DL++  +L++ Y  SG
Sbjct: 163 MLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSG 222

Query: 292 EISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQ 351
               A R+F  MP KDV+ W+ MI  +A   L   A+ LF  M    V PN  T VSVL 
Sbjct: 223 APDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLS 282

Query: 352 ACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
           ACA    L+ G  I S +   G    + ++NA++D+Y KCG + ++ +LF +  +++ V+
Sbjct: 283 ACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVS 342

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKM--------------------------------LEEQ 439
           W TM+ G+ +LG   +A  +F  M                                L + 
Sbjct: 343 WTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKD 402

Query: 440 VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR 499
               EVT    L A A L A++ G  +H    K + +++  +A +L+DMYAKCG++  A 
Sbjct: 403 AKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAM 462

Query: 500 LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGG 559
            VF  +   +   W+AMI   +M+G     L +F  M +   +PN +TF  +L AC++ G
Sbjct: 463 EVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHAG 522

Query: 560 LLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRAL 619
           L+ +GE  F+ M   YGI P I+HY  +V + GRAG L+KAA  IE +P  P+  +W AL
Sbjct: 523 LVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGAL 582

Query: 620 LGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS----------- 668
           LGAC  H NVE+  L+ Q++L+ EP +    VLLSNIYA A  WEK ++           
Sbjct: 583 LGACSRHGNVELAELAYQNLLELEPCNHGAFVLLSNIYAKAGDWEKVSNLRKLMRDSDVK 642

Query: 669 KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVRED 728
           KEP  S I+  G+VH F  GD SH     I   L+ ++ K +  GY PD+S +L+   ED
Sbjct: 643 KEPWCSSIDVNGIVHEFLVGDNSHPFSQKIYSKLDEISEKFKPIGYKPDMSNLLQLSEED 702

Query: 729 E-KERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRD 787
              E+ L VHSEKLA+AF L     S PIRI+KN+RIC DCH   K++S++  R+I++RD
Sbjct: 703 NLMEQSLNVHSEKLAIAFGLISTASSQPIRIVKNIRICGDCHAFAKLVSQLYDRDILLRD 762

Query: 788 VHRFHHFQDGCCSCGDFW 805
            +RFHHF+ G CSC D+W
Sbjct: 763 RYRFHHFRGGKCSCLDYW 780



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 127/570 (22%), Positives = 235/570 (41%), Gaps = 59/570 (10%)

Query: 10  FSCKQLTHQSKINAWLRGLSAQAALSTQQCSNSTTTPITFSV-SEFNSHSYATSLQSCIQ 68
           FSC   ++ + +   ++  +    LS  Q + + T  +     +E  S +    +  C  
Sbjct: 25  FSCSSTSNSTLLRVSVKCSALSTPLSLGQIAMNCTEAVKGEKGNEVESTNILEFIDQCTN 84

Query: 69  NDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYV--KLNRLPDATKLFDEMPERNTISFV 126
              L+    IH  +L+     D +  + LL  Y     + L  A  +F+++P+ N   + 
Sbjct: 85  TMQLKQ---IHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCWN 141

Query: 127 TTIQGYTVSSQFVEAVGLF-STLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYK 185
           T I+GY  SS   ++  +F   LH      N F F    K    +    L   +   V K
Sbjct: 142 TLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIK 201

Query: 186 LGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNF 229
               S+ F+  +LI+ +   G  + A +VF  +                     ++AL  
Sbjct: 202 ASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLL 261

Query: 230 FSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK 289
           F +M     KPN  T   VL AC     +   +          +   L +  A+LD+Y K
Sbjct: 262 FQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVK 321

Query: 290 SGEISNARRIFEEMPKKDVIPWSFM-------------------------------IARY 318
            G I++A+ +F +M +KD++ W+ M                               I+ Y
Sbjct: 322 CGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAY 381

Query: 319 AQTDLSIDAVELFCRMRQAFVA-PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD 377
            Q      A+ LF  M+ +  A P++ T +  L A A +  +D G+ IH  + +  +  +
Sbjct: 382 EQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLN 441

Query: 378 VFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
             ++ +L+D+YAKCG +  ++E+F    +++   W+ MI      G+   A+ +FS MLE
Sbjct: 442 CHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLE 501

Query: 438 EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSI 495
             +    VT++++L AC     +  G Q+    ++  Y +   + +   ++D++ + G +
Sbjct: 502 AYIKPNAVTFTNILCACNHAGLVNEGEQLF-EQMEPLYGIVPQIQHYVCVVDIFGRAGLL 560

Query: 496 TDARLVFDMMN-DWNEVSWNAMISGYSMHG 524
             A    + M        W A++   S HG
Sbjct: 561 EKAASFIEKMPIPPTAAVWGALLGACSRHG 590



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 140/287 (48%), Gaps = 13/287 (4%)

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYA--KCGRMENSVELFAESPKRNHVTWNTMIVGYVQ 421
           QIH+ ++R     D + ++ L+  YA   C  +  +  +F + P+ N   WNT+I GY  
Sbjct: 90  QIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCWNTLIRGYAS 149

Query: 422 LGEVGKAMIMFSKMLE--EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDV 479
             +  ++ ++F  ML    + P  + T+  + +A + L  L  G  +H + +KA+   D+
Sbjct: 150 SSDPTQSFLIFLHMLHSCSEFP-NKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSDL 208

Query: 480 VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
            + N+LI+ Y   G+   A  VF  M   + VSWNAMI+ +++ GL  + L +F  M+ +
Sbjct: 209 FILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMK 268

Query: 540 GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDK 599
             +PN +T V VLSAC+    LE G  +  S + N G    +    +M+ +  + G ++ 
Sbjct: 269 DVKPNVITMVSVLSACAKKIDLEFGR-WICSYIENNGFTEHLILNNAMLDMYVKCGCIND 327

Query: 600 AAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH-ILDFEPE 645
           A  L   +  +  ++ W  +L       + ++G     H I D  P 
Sbjct: 328 AKDLFNKMS-EKDIVSWTTMLDG-----HAKLGNYDEAHCIFDAMPH 368


>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
          Length = 575

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 224/561 (39%), Positives = 314/561 (55%), Gaps = 46/561 (8%)

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y   G +  +  +F       V  W+ +I  +A   L   A+  + +M    V PN FTF
Sbjct: 19  YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
            S+L+ C     ++ G  +HS  V++G  SD++V   L+DVYA+ G + ++ +LF   P+
Sbjct: 79  SSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE 134

Query: 407 -------------------------------RNHVTWNTMIVGYVQLGEVGKAMIMFSKM 435
                                          R+ V WN MI GY Q G   +A+++F +M
Sbjct: 135 KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM 194

Query: 436 LEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSI 495
           L+ +    EVT  SVL AC  L ALE G  VH          +V V  AL+DMY+KCGS+
Sbjct: 195 LKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSL 254

Query: 496 TDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSAC 555
            DARLVFD ++D + V+WN+MI GY+M G S E L++F  M + G  P N+TF+G+LSAC
Sbjct: 255 EDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSAC 314

Query: 556 SNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMI 615
            + G + +G   F  M   YGIEP IEHY  MV+LLGRAGH+++A +L++ +  +P  ++
Sbjct: 315 GHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVL 374

Query: 616 WRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-------- 667
           W  LLGAC +H  + +G    + ++D    +  T++LLSNIYA   +W+  A        
Sbjct: 375 WGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKD 434

Query: 668 ---SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRD 724
               KEPG S IE    VH F AG  +H     I  MLE +N   +  GY P    VL D
Sbjct: 435 SGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHD 494

Query: 725 VREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREII 784
           + E EKER L VHSEKLA+AF L    P + I+I+KNLR+C DCH   K+ISKI  R+I+
Sbjct: 495 IGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIV 554

Query: 785 IRDVHRFHHFQDGCCSCGDFW 805
           +RD +RFHHF +G CSCGD+W
Sbjct: 555 VRDRNRFHHFVNGSCSCGDYW 575



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 197/392 (50%), Gaps = 47/392 (11%)

Query: 224 EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
           E+ALNF++QM   G +PN FTF+ +LK C     I   K+ H  A+K  ++ DLYV   L
Sbjct: 57  EQALNFYAQMLTQGVEPNAFTFSSILKLC----PIEPGKALHSQAVKLGFDSDLYVRTGL 112

Query: 284 LDLYTKSGEISNARRIFEEMPKK-------------------------------DVIPWS 312
           LD+Y + G++ +A+++F+ MP+K                               D + W+
Sbjct: 113 LDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWN 172

Query: 313 FMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV 372
            MI  Y Q  +  +A+ LF RM +A   PN+ T +SVL AC  +  L+ G  +HS +   
Sbjct: 173 VMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENN 232

Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMF 432
           G+  +V V  AL+D+Y+KCG +E++  +F +   ++ V WN+MIVGY   G   +A+ +F
Sbjct: 233 GIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLF 292

Query: 433 SKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYA 490
             M    +  T +T+  +L AC     +  G  +    +K  Y ++  + +   ++++  
Sbjct: 293 KSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFN-KMKDEYGIEPKIEHYGCMVNLLG 351

Query: 491 KCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFV 549
           + G +  A  LV +M  + + V W  ++    +HG  A   K+ +L+  +    N+ T++
Sbjct: 352 RAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNL-ANSGTYI 410

Query: 550 ---GVLSACSNGGLLEQGEAYFKSMVANYGIE 578
               + +A  N      G A  ++M+ + G++
Sbjct: 411 LLSNIYAAVGN----WDGVARLRTMMKDSGVK 438



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/386 (24%), Positives = 162/386 (41%), Gaps = 74/386 (19%)

Query: 101 YVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAF 160
           Y  L RL  +  LF      +   +   I G+ +     +A+  ++ +  +G E N F F
Sbjct: 19  YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78

Query: 161 TAFLKVLVSMGWAELCP-----CVFACVYKLGHDSNAFVGTALIDAFSVCGCV------- 208
           ++ LK         LCP      + +   KLG DS+ +V T L+D ++  G V       
Sbjct: 79  SSILK---------LCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLF 129

Query: 209 ------------------------EFARKVFDGLF----------------NDCFEEALN 228
                                   + AR +FDG+                 N    EAL 
Sbjct: 130 DTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALV 189

Query: 229 FFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYT 288
            F +M     KPN  T   VL AC  L  +   +  H        + +++V  AL+D+Y+
Sbjct: 190 LFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYS 249

Query: 289 KSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVS 348
           K G + +AR +F+++  KDV+ W+ MI  YA    S +A++LF  M +  + P   TF+ 
Sbjct: 250 KCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIG 309

Query: 349 VLQACA----TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE- 403
           +L AC       EG D+ N++       G+   +     ++++  + G +E + EL    
Sbjct: 310 ILSACGHSGWVTEGWDIFNKMKD---EYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNM 366

Query: 404 SPKRNHVTWNTMIV-----GYVQLGE 424
           + + + V W T++      G + LGE
Sbjct: 367 NIEPDPVLWGTLLGACRLHGKIALGE 392



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 133/347 (38%), Gaps = 73/347 (21%)

Query: 25  LRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLK 84
           LRGL  QA     Q       P        N+ ++++ L+ C     ++    +H Q +K
Sbjct: 52  LRGLHEQALNFYAQMLTQGVEP--------NAFTFSSILKLC----PIEPGKALHSQAVK 99

Query: 85  KGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTT---------------- 128
            G   DL+    LL+VY +   +  A +LFD MPE++ +S                    
Sbjct: 100 LGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVL 159

Query: 129 ---------------IQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
                          I GYT +    EA+ LF  + +   + N     + L     +G  
Sbjct: 160 FDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGAL 219

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF--- 223
           E    V + +   G   N  VGTAL+D +S CG +E AR VFD +       +N      
Sbjct: 220 ESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGY 279

Query: 224 ------EEALNFFSQMRAVGFKPNNFTFAFVLKAC-------LGLDTIRVAKSAHGCALK 270
                 +EAL  F  M  +G  P N TF  +L AC        G D     K  +G   K
Sbjct: 280 AMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPK 339

Query: 271 TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
             +         +++L  ++G +  A  + + M  + D + W  ++ 
Sbjct: 340 IEH------YGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLG 380


>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
          Length = 720

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 239/654 (36%), Positives = 366/654 (55%), Gaps = 36/654 (5%)

Query: 185 KLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--------------GLFNDCFEEALNF- 229
           KL  D    +  AL+D +S CGC+  A+ +F               G F+   +    F 
Sbjct: 70  KLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFD 129

Query: 230 -FSQMRAVG--FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
              QM A G   K +  T    +  C     +   K  H  +LK  +  +  VA A +  
Sbjct: 130 VLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVAS 189

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTD---LSIDAVELFCRMRQAFVAPNQ 343
           Y K G +S A+R+F  +  K V  W+ +I  +AQ++   LS+DA     +M+ + + P+ 
Sbjct: 190 YAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDA---HLQMKISGLLPDS 246

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
           FT  S+L AC+ ++ L LG ++H  ++R  L  D+FV  +++ +Y  CG +     LF  
Sbjct: 247 FTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDA 306

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
              ++ V+WNT+I GY+Q G   +A+ +F +M+   +    ++   V  AC+ L +L  G
Sbjct: 307 MEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLG 366

Query: 464 MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMH 523
            + H   +K   + D  +A +LIDMYAK GSIT +  VF+ + + +  SWNAMI GY +H
Sbjct: 367 REAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIH 426

Query: 524 GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEH 583
           GL+ E +K+F+ MQ+ G  P++LTF+GVL+AC++ GL+ +G  Y   M +++G++P ++H
Sbjct: 427 GLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKH 486

Query: 584 YTSMVSLLGRAGHLDKAAKLI-EGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDF 642
           Y  ++ +LGRAG LDKA +++ E +  +  V IW++LL +C IH N+E+G   A  + + 
Sbjct: 487 YACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFEL 546

Query: 643 EPEDEATHVLLSNIYAMARSWEK-----------AASKEPGLSWIENQGMVHYFRAGDTS 691
           EPE    +VLLSN+YA    WE            +  K+ G SWIE    V  F  G+  
Sbjct: 547 EPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERF 606

Query: 692 HADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMP 751
                 I+ +   L MK  K GY PD  +V  D+ E+EK   L  HSEKLAL + L K  
Sbjct: 607 LDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTS 666

Query: 752 PSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
             + IR+ KNLRICVDCH A K+ISK+++REI++RD  RFHHF++G CSCGD+W
Sbjct: 667 EGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 720



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 194/422 (45%), Gaps = 24/422 (5%)

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR 297
           F P+  T   VL  C     I + K  HG A+K   + +L +  AL+D+Y+K G I+NA+
Sbjct: 38  FMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQ 97

Query: 298 RIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF-----VAPNQFTFVSVLQA 352
            IF+    K+V+ W+ M+  ++      D    F  +RQ       V  ++ T ++ +  
Sbjct: 98  MIFKMNNNKNVVSWNTMVGGFSAEG---DTHGTFDVLRQMLAGGEDVKADEVTILNAVPV 154

Query: 353 CATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTW 412
           C     L    ++H   ++   + +  V+NA +  YAKCG +  +  +F     +   +W
Sbjct: 155 CFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSW 214

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
           N +I G+ Q  +   ++    +M    +     T  S+L AC+ L +L  G +VH   ++
Sbjct: 215 NALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIR 274

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
              + D+ V  +++ +Y  CG +   + +FD M D + VSWN +I+GY  +G     L V
Sbjct: 275 NWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGV 334

Query: 533 FDLMQQRGWRPNNLTFVGVLSACS---NGGLLEQGEAY-FKSMVANYGIEPCIEHYTSMV 588
           F  M   G +   ++ + V  ACS   +  L  +  AY  K ++ +     C     S++
Sbjct: 335 FRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIAC-----SLI 389

Query: 589 SLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEA 648
            +  + G + +++K+  G+  + S   W A++    IH       L+ + I  FE     
Sbjct: 390 DMYAKNGSITQSSKVFNGLK-EKSTASWNAMIMGYGIHG------LAKEAIKLFEEMQRT 442

Query: 649 TH 650
            H
Sbjct: 443 GH 444



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 163/322 (50%), Gaps = 10/322 (3%)

Query: 306 KDVIPWSFMIARYAQTDLSIDAVELFCRMRQ-----AFVAPNQFTFVSVLQACATMEGLD 360
           ++ + W+ MI  ++    S ++  L   M +     AF+ P+  T V+VL  CA    + 
Sbjct: 1   RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFM-PDVATLVTVLPVCAREREIG 59

Query: 361 LGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYV 420
           LG  +H   V++ L  ++ ++NALMD+Y+KCG + N+  +F  +  +N V+WNTM+ G+ 
Sbjct: 60  LGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFS 119

Query: 421 QLGEVGKAMIMFSKMLE--EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
             G+      +  +ML   E V A EVT  + +  C   + L    ++HC ++K  +  +
Sbjct: 120 AEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYN 179

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
            +VANA +  YAKCGS++ A+ VF  +      SWNA+I G++        L     M+ 
Sbjct: 180 ELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKI 239

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLD 598
            G  P++ T   +LSACS    L  G+     ++ N+ +E  +  Y S++SL    G L 
Sbjct: 240 SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW-LERDLFVYLSVLSLYIHCGELC 298

Query: 599 KAAKLIEGIPFQPSVMIWRALL 620
               L + +    S++ W  ++
Sbjct: 299 TVQALFDAME-DKSLVSWNTVI 319



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 89/375 (23%), Positives = 166/375 (44%), Gaps = 29/375 (7%)

Query: 66  CIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISF 125
           C     L +   +HC  LK+    +    N  +  Y K   L  A ++F  +  +   S+
Sbjct: 155 CFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSW 214

Query: 126 VTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFT--AFLKVLVSMGWAELCPCVFACV 183
              I G+  S+     + L + L  +   L P +FT  + L     +    L   V   +
Sbjct: 215 NALIGGHAQSND--PRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFI 272

Query: 184 YKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GLFNDCF-EEAL 227
            +   + + FV  +++  +  CG +   + +FD               G   + F + AL
Sbjct: 273 IRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRAL 332

Query: 228 NFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLY 287
             F QM   G +    +   V  AC  L ++R+ + AH  ALK   E D ++A +L+D+Y
Sbjct: 333 GVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMY 392

Query: 288 TKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFV 347
            K+G I+ + ++F  + +K    W+ MI  Y    L+ +A++LF  M++    P+  TF+
Sbjct: 393 AKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFL 452

Query: 348 SVLQACA----TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
            VL AC       EGL   +Q+ S     GL  ++     ++D+  + G+++ ++ + AE
Sbjct: 453 GVLTACNHSGLIHEGLRYLDQMKS---SFGLKPNLKHYACVIDMLGRAGQLDKALRVVAE 509

Query: 404 --SPKRNHVTWNTMI 416
             S + +   W +++
Sbjct: 510 EMSEEADVGIWKSLL 524



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 113/236 (47%), Gaps = 36/236 (15%)

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ-----VPATEVTYSSVLRACASLAALE 461
           RN V+WN+MI  +   G   ++ ++  +M+EE      +P    T  +VL  CA    + 
Sbjct: 1   RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDV-ATLVTVLPVCAREREIG 59

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
            G  VH   VK   D ++V+ NAL+DMY+KCG IT+A+++F M N+ N VSWN M+ G+S
Sbjct: 60  LGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFS 119

Query: 522 MHGLSAEVLKVFDLMQQ-----RGWRPNNLTFVGVLSACSNGGLLE----------QGEA 566
             G   +    FD+++Q        + + +T +  +  C +   L           + E 
Sbjct: 120 AEG---DTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEF 176

Query: 567 YFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
            +  +VAN           + V+   + G L  A ++  GI    +V  W AL+G 
Sbjct: 177 VYNELVAN-----------AFVASYAKCGSLSYAQRVFHGIR-SKTVNSWNALIGG 220



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 76/327 (23%), Positives = 143/327 (43%), Gaps = 43/327 (13%)

Query: 21  INAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHC 80
           +N+W   +   A  +  + S      +  S    +S +  + L +C +   L+    +H 
Sbjct: 211 VNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHG 270

Query: 81  QVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVE 140
            +++     DLF    +L++Y+    L     LFD M +++ +S+ T I GY  +     
Sbjct: 271 FIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDR 330

Query: 141 AVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVF----ACVYKLGH--DSNAFV 194
           A+G+F  +   G +L        + ++   G   L P +     A  Y L H  + +AF+
Sbjct: 331 ALGVFRQMVLYGIQL------CGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFI 384

Query: 195 GTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGF 238
             +LID ++  G +  + KVF+GL                 +   +EA+  F +M+  G 
Sbjct: 385 ACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGH 444

Query: 239 KPNNFTFAFVLKAC-------LGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
            P++ TF  VL AC        GL  +   KS+ G       + +L     ++D+  ++G
Sbjct: 445 NPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFG------LKPNLKHYACVIDMLGRAG 498

Query: 292 EISNARRIF-EEMPKK-DVIPWSFMIA 316
           ++  A R+  EEM ++ DV  W  +++
Sbjct: 499 QLDKALRVVAEEMSEEADVGIWKSLLS 525


>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1274

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 250/743 (33%), Positives = 394/743 (53%), Gaps = 38/743 (5%)

Query: 98  LNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNP 157
           L  ++   +L  A ++FD +P  +  ++   I+ Y+    F  A+ L+ ++ R     N 
Sbjct: 41  LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100

Query: 158 FAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF-- 215
           + F   LK   ++        + A     G  ++ FV TALID +  C     AR VF  
Sbjct: 101 YTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAK 160

Query: 216 ------------------DGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDT 257
                              G+++      L+        G +PN  T   +L        
Sbjct: 161 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHG---GLRPNASTLVSLLPLLAQHGA 217

Query: 258 IRVAKSAHGCALKTCYEMD---LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFM 314
           +    S H   L+ C E +   + +  ALLD+Y K  ++  A R+F  MP ++ + WS +
Sbjct: 218 LFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSAL 277

Query: 315 IARYAQTDLSIDAVELFCRMR-QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
           I  +   D   +A  LF  M  +     +  +  S L+ CA++  L +G Q+H+L+ + G
Sbjct: 278 IGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSG 337

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
           + +D+  SN+L+ +YAK G +  +   F E   ++ +++  ++ G VQ G+  +A ++F 
Sbjct: 338 IHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFK 397

Query: 434 KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCG 493
           KM    +     T  S++ AC+ LAAL+ G   H   +     ++  + N+LIDMYAKCG
Sbjct: 398 KMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCG 457

Query: 494 SITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLS 553
            I  +R VFD M   + VSWN MI+GY +HGL  E   +F  M+ +G+ P+++TF+ +++
Sbjct: 458 KIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIA 517

Query: 554 ACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSV 613
           ACS+ GL+ +G+ +F +M   YGI P +EHY  MV LL R G LD+A + I+ +P +  V
Sbjct: 518 ACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADV 577

Query: 614 MIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA------ 667
            +W ALLGAC IH N+++G+  ++ I    PE     VLLSNI++ A  +++AA      
Sbjct: 578 RVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQ 637

Query: 668 -----SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVL 722
                 K PG SWIE  G +H F  GD SH     I   L+ + +  +K GY  D S VL
Sbjct: 638 KVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFVL 697

Query: 723 RDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQRE 782
           +D+ E+EKE+ L  HSEKLA+AF +  +     I + KNLR+C DCHTAIK ++ +  R 
Sbjct: 698 QDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRT 757

Query: 783 IIIRDVHRFHHFQDGCCSCGDFW 805
           II+RD +RFHHF++G CSCG+FW
Sbjct: 758 IIVRDTNRFHHFKNGQCSCGNFW 780



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 127/495 (25%), Positives = 228/495 (46%), Gaps = 29/495 (5%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N +++   L++C    DL+   TIH      G   DLF +  L+++Y++  R   A  +F
Sbjct: 99  NKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVF 158

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFT--AFLKVLVS--- 169
            +MP R+ +++   + GY     +  A+     +   G  L P A T  + L +L     
Sbjct: 159 AKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHG-GLRPNASTLVSLLPLLAQHGA 217

Query: 170 --MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL--------- 218
              G +    C+ AC+ +  ++    +GTAL+D ++ C  + +A +VF G+         
Sbjct: 218 LFQGTSIHAYCLRACLEQ--NEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWS 275

Query: 219 -------FNDCFEEALNFFSQMRAVGF-KPNNFTFAFVLKACLGLDTIRVAKSAHGCALK 270
                    D   EA N F  M   G    +  + A  L+ C  L  + +    H    K
Sbjct: 276 ALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAK 335

Query: 271 TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVEL 330
           +    DL  + +LL +Y K+G I+ A   F+E+  KD I +  +++   Q   + +A  +
Sbjct: 336 SGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLV 395

Query: 331 FCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAK 390
           F +M+   + P+  T VS++ AC+ +  L  G   H  V+  GL  +  + N+L+D+YAK
Sbjct: 396 FKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAK 455

Query: 391 CGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
           CG+++ S ++F + P R+ V+WNTMI GY   G   +A  +F  M  +     +VT+  +
Sbjct: 456 CGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICL 515

Query: 451 LRACASLAALEPGMQ-VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWN 509
           + AC+    +  G      +T K      +     ++D+ A+ G + +A      M    
Sbjct: 516 IAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKA 575

Query: 510 EVS-WNAMISGYSMH 523
           +V  W A++    +H
Sbjct: 576 DVRVWGALLGACRIH 590


>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
 gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
          Length = 920

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 264/755 (34%), Positives = 396/755 (52%), Gaps = 42/755 (5%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVE-AVGLFSTL 148
           DLF    LL+ Y K   +  A ++F  +   + I +   I     + +  + A+ L   +
Sbjct: 169 DLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRM 228

Query: 149 HREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCV 208
             EG   N  +F A L          L   + A V +LG   +  V TAL+  +  CG V
Sbjct: 229 WLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSV 288

Query: 209 EFARKVFDGL--------------FNDCFEEALNF--FSQMRAVGFKPNNFTFAFVLKAC 252
           + +  VF+ +              F  C   +  F  + +M+  GF+PN  TF   LKA 
Sbjct: 289 DESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAA 348

Query: 253 LGLDTIRVAKSA--HGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIP 310
               +  + +SA  HG       E D+ V  AL+ +Y  +G I  AR  F+ +P K+++ 
Sbjct: 349 CSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVS 408

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV 370
           W+ M+  Y     + +A+ELF  M++  +APN+ ++++VL  C   E +     IH+ VV
Sbjct: 409 WNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCC---EDVSEARSIHAEVV 465

Query: 371 RVGLLS-DVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAM 429
             GL + +  ++N ++ ++A+ G +E +V  F  +  ++ V+WNT +       ++  A+
Sbjct: 466 GNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNTKVAALSAREDLHGAI 525

Query: 430 IMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHC-LTVKANYDMDVVVANALIDM 488
             F  M  E     + T  SV+  CA L  LE G  +   L+     + DVVVA+A+++M
Sbjct: 526 TAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVASAVMNM 585

Query: 489 YAKCGSITDA--RLVFDMMNDWNE-VSWNAMISGYSMHGLSAEVLKVFDLMQQRGW-RPN 544
            AKCGS  D   RL   M +D  + V+WN MI+ Y+ HG   + LK+F +MQQR   RP+
Sbjct: 586 VAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPD 645

Query: 545 NLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP-CIEHYTSMVSLLGRAGHLDKAAKL 603
           + TFV VLS CS+ GL+E G   F       GIE   +EHY  +V +LGR G+L +A   
Sbjct: 646 SSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAEDF 705

Query: 604 IEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW 663
           I  +P     ++W +LLGAC  + ++E G  +A+  ++    D   +V+LSNIYA A  W
Sbjct: 706 IRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGYVVLSNIYAAAGRW 765

Query: 664 E------------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRK 711
           E            +   + PG S I  +  VH F A D SH   + I   LE L    R+
Sbjct: 766 EDSIRVREDMAERRVKKRVPGKSSIVVKNRVHEFFARDRSHPQSDAIYAELERLKGLIRE 825

Query: 712 AGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTA 771
           AGY+PD   VL DV E++KE+ LW HSEKLA+AF L  +P    IR+IKNLR+C DCHTA
Sbjct: 826 AGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISVPHRHSIRVIKNLRVCKDCHTA 885

Query: 772 IKIISKIVQREIIIRDVHRFHHF-QDGCCSCGDFW 805
            K I+++ QREI +RD +RFHHF +DG CSCGD+W
Sbjct: 886 TKFIARVTQREIAVRDCNRFHHFGKDGECSCGDYW 920



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 154/604 (25%), Positives = 275/604 (45%), Gaps = 47/604 (7%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L+ CI + DL     +H Q++K+G   +    N L+ +Y K   L DA   F  +  R  
Sbjct: 31  LRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSALRSRGI 90

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS----MGWAELCPC 178
            ++ T I   +  +   +         R  +  N     A L  + S       +   P 
Sbjct: 91  ATWNTLIAAQSSPAAVFDLYTRMKLEERAENRPNKLTIIAVLGAIASGDPSSSSSSRAPS 150

Query: 179 VFACVYKLGHDS--------NAFVGTALIDAFSVCGCVEFARKVFDGL------------ 218
           +     ++ HD         + FV TAL+DA+  CGCVE A +VF  +            
Sbjct: 151 IAQA--RIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAI 208

Query: 219 -----FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY 273
                 ++  + AL    +M   G  PN  +F  +L +C    ++ +A+S H    +  +
Sbjct: 209 MACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGF 268

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
             D+ VA AL+ +Y + G +  +  +FE M  ++ + W+ MIA +AQ      A  ++ R
Sbjct: 269 LGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWR 328

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQ--IHSLVVRVGLLSDVFVSNALMDVYAKC 391
           M+Q    PN+ TFV+ L+A  +    DLG    +H  +   GL  DV V  AL+ +Y   
Sbjct: 329 MQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGST 388

Query: 392 GRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVL 451
           G ++ +   F   P +N V+WN M+  Y   G   +AM +F+ M  + +   +V+Y +VL
Sbjct: 389 GAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVL 448

Query: 452 RACASLAALEPGMQVHCLTVKAN-YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE 510
             C  ++       +H   V    +  +  +AN ++ M+A+ GS+ +A   FD     + 
Sbjct: 449 GCCEDVS---EARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDS 505

Query: 511 VSWNAMISGYS----MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEA 566
           VSWN  ++  S    +HG     +  F  MQ  G+RP+  T V V+  C++ G LE G +
Sbjct: 506 VSWNTKVAALSAREDLHG----AITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRS 561

Query: 567 YFKSMVANYGIEPCIEHYTSMVSLLGRAG-HLDKAAKLIEGIP-FQPSVMIWRALLGACI 624
             + + A   +E  +   +++++++ + G  +D+  +L   +P  +  ++ W  ++ A  
Sbjct: 562 IQQQLSAAIEVERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYA 621

Query: 625 IHNN 628
            H +
Sbjct: 622 QHGH 625



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 128/502 (25%), Positives = 217/502 (43%), Gaps = 40/502 (7%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  S+   L SC  +  L  A +IH +V + G   D+     L+ +Y +   + ++  +F
Sbjct: 236 NRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVF 295

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           + M  RN +S+   I  +        A  ++  + +EG   N   F   LK   S    +
Sbjct: 296 EAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQD 355

Query: 175 LCPCV-----FACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------- 218
           L          AC    G + +  VGTAL+  +   G ++ AR  FD +           
Sbjct: 356 LGESAALHGWIACA---GLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAM 412

Query: 219 -----FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT-C 272
                 N    EA+  F+ M+     PN  ++  VL  C   + +  A+S H   +    
Sbjct: 413 LTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCC---EDVSEARSIHAEVVGNGL 469

Query: 273 YEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFC 332
           +  +  +A  ++ ++ +SG +  A   F+    KD + W+  +A  +  +    A+  F 
Sbjct: 470 FAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFY 529

Query: 333 RMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI-HSLVVRVGLLSDVFVSNALMDVYAKC 391
            M+     P++FT VSV+  CA +  L+LG  I   L   + +  DV V++A+M++ AKC
Sbjct: 530 TMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVASAVMNMVAKC 589

Query: 392 GRMENSVE-LFAESP--KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE-QVPATEVTY 447
           G   +  E LFA  P  +++ V WNTMI  Y Q G   KA+ +F  M +   V     T+
Sbjct: 590 GSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTF 649

Query: 448 SSVLRACASLAALEPGMQVHCL----TVKANYDMDVVVANALIDMYAKCGSITDAR-LVF 502
            SVL  C+    +E G  +HC      V       V     L+D+  + G + +A   + 
Sbjct: 650 VSVLSGCSHAGLVEDG--IHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAEDFIR 707

Query: 503 DMMNDWNEVSWNAMISGYSMHG 524
            M    + V W +++   S +G
Sbjct: 708 KMPLPADSVVWTSLLGACSSYG 729



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 134/292 (45%), Gaps = 19/292 (6%)

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           T   +L+ C     L  G Q+H  +V+ GL  +  + N L+ +Y+KC  ++++   F+  
Sbjct: 26  TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKM-LEEQVP--ATEVTYSSVLRACAS----- 456
             R   TWNT+I        V     ++++M LEE+      ++T  +VL A AS     
Sbjct: 86  RSRGIATWNTLIAAQSSPAAV---FDLYTRMKLEERAENRPNKLTIIAVLGAIASGDPSS 142

Query: 457 -----LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEV 511
                  ++     VH     ++ + D+ VA AL+D Y KCG +  A  VF  +   + +
Sbjct: 143 SSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLI 202

Query: 512 SWNAMISGYSMHGLSAE-VLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKS 570
            WNA I   + +    +  L +   M   G  PN  +FV +LS+C +   L    +   +
Sbjct: 203 CWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARS-IHA 261

Query: 571 MVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
            V   G    +   T++V++ GR G +D++  + E +  +  V  W A++ A
Sbjct: 262 RVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVS-WNAMIAA 312



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 10/187 (5%)

Query: 446 TYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMM 505
           T + +LR C   A L  G Q+H   VK     + ++ N L+ MY+KC S+ DA   F  +
Sbjct: 26  TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85

Query: 506 NDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE 565
                 +WN +I+  S      ++     L ++   RPN LT + VL A ++G       
Sbjct: 86  RSRGIATWNTLIAAQSSPAAVFDLYTRMKLEERAENRPNKLTIIAVLGAIASGDPSSSSS 145

Query: 566 AYFKSM---------VANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIW 616
           +   S+         +    +E  +   T+++   G+ G ++ A ++   I   P ++ W
Sbjct: 146 SRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQV-PDLICW 204

Query: 617 RALLGAC 623
            A + AC
Sbjct: 205 NAAIMAC 211


>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
          Length = 713

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 239/664 (35%), Positives = 372/664 (56%), Gaps = 40/664 (6%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           DL  +N  L   VK   L +A ++FD+M +++ IS+ T I GY  ++   EA+ LF  + 
Sbjct: 48  DLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMR 107

Query: 150 RE-GHELNPFAFTAFLKVL---VSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVC 205
            E G  ++PF  +   K       + + EL   +     K G  ++ FVG+AL+D ++  
Sbjct: 108 VESGLRIDPFILSLAHKACGLNSDVNYGEL---LHGYAVKTGLVNSVFVGSALLDMYTKN 164

Query: 206 GCVEFARKVF---------------DGLFNDCF-EEALNFFSQMRAVGFKPNNFTFAFVL 249
           G +   R+VF                GL    + +EAL +FS+M     + +++TFA  L
Sbjct: 165 GKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIAL 224

Query: 250 KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
           KAC     +   +  H  A+K  +++  +VA  L  +Y K G++     +FE+M  +DV+
Sbjct: 225 KACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVV 284

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
            W+ +I    Q      AV+ F RMR++ V+PN++TF +V+  CA +  ++ G Q+H+L+
Sbjct: 285 SWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALI 344

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAM 429
           + +GL + + V N++M +YAKCG++ +S  +F E  +R+ V+W+T+I GY Q G V +A 
Sbjct: 345 LHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAF 404

Query: 430 IMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMY 489
            + S M  E    TE   +SVL AC ++A LE G Q+H   +    +   +V +ALI+MY
Sbjct: 405 ELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMY 464

Query: 490 AKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFV 549
            KCGSI +A  +FD   + + VSW AMI+GY+ HG S EV+ +F+ + + G RP+++TF+
Sbjct: 465 CKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFI 524

Query: 550 GVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF 609
           GVLSACS+ GL++ G  YF +M   Y I P  EHY  M+ LL RAG L  A  +IE +PF
Sbjct: 525 GVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPF 584

Query: 610 QPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS- 668
               ++W  LL AC +H +VE GR +A+ IL  EP    TH+ L+NIYA    W +AA  
Sbjct: 585 HRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADI 644

Query: 669 ----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKS------RKA 712
                     KEPG SWI+ + +V  F AGD SH     I  ML+ L  ++      ++ 
Sbjct: 645 RKLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLASRTELADCVQET 704

Query: 713 GYIP 716
           G++P
Sbjct: 705 GFLP 708



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 130/479 (27%), Positives = 223/479 (46%), Gaps = 18/479 (3%)

Query: 64  QSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTI 123
           ++C  N D+     +H   +K G    +F  + LL++Y K  ++ +  ++F EMP RN +
Sbjct: 124 KACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVV 183

Query: 124 SFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACV 183
           S+   I G   +    EA+  FS + R   E + + F   LK     G       + A  
Sbjct: 184 SWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQA 243

Query: 184 YKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-FNDCF---------------EEAL 227
            K G D ++FV   L   ++ CG +E+   +F+ +   D                 E A+
Sbjct: 244 MKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAV 303

Query: 228 NFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLY 287
             F +MR     PN +TFA V+  C  L  I   +  H   L       L V  +++ +Y
Sbjct: 304 QAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMY 363

Query: 288 TKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFV 347
            K G+++++  IF EM ++D++ WS +IA Y Q     +A EL   MR     P +F   
Sbjct: 364 AKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALA 423

Query: 348 SVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKR 407
           SVL AC  M  L+ G Q+H+ V+ +GL     V +AL+++Y KCG +E +  +F  +   
Sbjct: 424 SVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAEND 483

Query: 408 NHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ-V 466
           + V+W  MI GY + G   + + +F K+    +    VT+  VL AC+    ++ G    
Sbjct: 484 DIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYF 543

Query: 467 HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN-DWNEVSWNAMISGYSMHG 524
           + ++ K            +ID+  + G ++DA  + + M    ++V W+ ++    +HG
Sbjct: 544 NAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHG 602



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/418 (24%), Positives = 185/418 (44%), Gaps = 20/418 (4%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E++S+++A +L++C  +  L     IH Q +KKG  +  F  N L  +Y K  +L     
Sbjct: 214 EYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLT 273

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           LF++M  R+ +S+ T I       Q   AV  F  +       N + F A +    ++  
Sbjct: 274 LFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLAR 333

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------------- 219
            E    + A +  LG  ++  V  +++  ++ CG +  +  +F  +              
Sbjct: 334 IEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAG 393

Query: 220 ---NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
                   EA    S MR  G KP  F  A VL AC  +  +   K  H   L    E  
Sbjct: 394 YXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHT 453

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
             V  AL+++Y K G I  A RIF+     D++ W+ MI  YA+   S + ++LF ++ +
Sbjct: 454 AMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPR 513

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
             + P+  TF+ VL AC+    +DLG +  +++  +  +         ++D+  + GR+ 
Sbjct: 514 VGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLS 573

Query: 396 NSVELFAESP-KRNHVTWNTMIVGYVQLGEVGKAMIMFSKM--LEEQVPATEVTYSSV 450
           ++  +    P  R+ V W+T++      G+V +      ++  LE     T +T +++
Sbjct: 574 DAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANI 631



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 78/326 (23%), Positives = 137/326 (42%), Gaps = 48/326 (14%)

Query: 23  AWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQV 82
           +W   ++    +  ++C+      +  S    N +++A  +  C     ++    +H  +
Sbjct: 285 SWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALI 344

Query: 83  LKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAV 142
           L  G    L   N ++ +Y K  +L  ++ +F EM  R+ +S+ T I GY       EA 
Sbjct: 345 LHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAF 404

Query: 143 GLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAF 202
            L S +  EG +   FA  + L    +M   E    + A V  +G +  A V +ALI+ +
Sbjct: 405 ELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMY 464

Query: 203 SVCGCVEFARKVFDGLFNDCF----------------EEALNFFSQMRAVGFKPNNFTFA 246
             CG +E A ++FD   ND                   E ++ F ++  VG +P++ TF 
Sbjct: 465 CKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFI 524

Query: 247 FVLKAC-------LGLD---------TIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKS 290
            VL AC       LG            I  +K  +GC               ++DL  ++
Sbjct: 525 GVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGC---------------MIDLLCRA 569

Query: 291 GEISNARRIFEEMP-KKDVIPWSFMI 315
           G +S+A  + E MP  +D + WS ++
Sbjct: 570 GRLSDAEHMIEAMPFHRDDVVWSTLL 595



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 133/288 (46%), Gaps = 10/288 (3%)

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
           R+ F AP   +       C  ++ L+  N   S  +     +D+  SN  +    K G +
Sbjct: 11  RRLFTAPAVAS-----TECIDLQVLERSNDNLSQNIHFISQTDLPESNKQLKELVKTGHL 65

Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKM-LEEQVPATEVTYSSVLRA 453
            N+  +F +  +++ ++W T+I GYV   +  +A+++F  M +E  +       S   +A
Sbjct: 66  GNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKA 125

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
           C   + +  G  +H   VK      V V +AL+DMY K G I + R VF  M   N VSW
Sbjct: 126 CGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSW 185

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG-EAYFKSMV 572
            A+I+G    G + E L  F  M +     ++ TF   L AC++ G L  G E + ++M 
Sbjct: 186 TAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMK 245

Query: 573 ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
             + +   + +  ++ ++  + G L+    L E +  +  V+ W  ++
Sbjct: 246 KGFDVSSFVAN--TLATMYNKCGKLEYGLTLFEKMSMR-DVVSWTTII 290


>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Brachypodium distachyon]
          Length = 849

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 262/784 (33%), Positives = 407/784 (51%), Gaps = 47/784 (5%)

Query: 62  SLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERN 121
           +L+SC  +D  Q         L  G   D F  N L+++Y +  R+ DA K+F+ M  RN
Sbjct: 73  ALKSCRGDDGRQVHAVAAKLGLADG---DPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRN 129

Query: 122 TISFVTTIQGYTVSSQFVEAVGLF-STLHREGHELNPFAFT--AFLKVLVSMGWAELCPC 178
            +S+   +       + +E   LF   L   G    P   T    L +  ++ W E    
Sbjct: 130 LVSWNALMAAVADPRRGLE---LFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRA 186

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFAR-----------------KVFDGLFND 221
           V     K G D+   V   L+D ++ CG +  A                   V  G +  
Sbjct: 187 VHGLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYAR 246

Query: 222 CFEEALNFF----SQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM-- 275
             E    F      QM   G   +  T   VL  C GL  +   +  H   ++    +  
Sbjct: 247 NGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTG 306

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
           D+ V  AL+  Y + G + +A R+F+ +  K V  W+ +I  +AQ   +  A+ELF  M 
Sbjct: 307 DM-VPNALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMT 365

Query: 336 QA-FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
            A    P+ F+  S+L AC  ++ L  G   H  ++R GL  D F+  +L+ VY +CGR 
Sbjct: 366 NACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRE 425

Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVP--ATEVTYSSVLR 452
             +  LF    +++ V+WNTMI GY Q G  G+++ +F +M  ++     + +  +S L 
Sbjct: 426 SLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSALV 485

Query: 453 ACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS 512
           AC+ L A+  G ++HC  +KA+   D  +++++IDMY+KCGS+ DAR+ FD +   + VS
Sbjct: 486 ACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAKDAVS 545

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
           W  MI+GY+++G   E + ++D M + G  P+  T++G+L AC + G+LE G  +F+ M 
Sbjct: 546 WTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDGLCFFQEMR 605

Query: 573 ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIG 632
               IE  +EHY  ++ +L RAG    A  L+E +P +P   I  ++L AC +H  VE+G
Sbjct: 606 NLPKIEAKLEHYACVIGMLSRAGRFADAVALMEVMPEEPDAKILSSVLSACHMHGEVELG 665

Query: 633 RLSAQHILDFEPEDEATHVLLSNIYAMARSWEK-----------AASKEPGLSWIENQGM 681
           +  A  +L+ EP     +VL SN+YA +R W++             +KEPG SWI+  G 
Sbjct: 666 KKVADKLLELEPHKAEHYVLASNMYAGSRQWDEMRKVRKMLRDAGVAKEPGCSWIDIAGK 725

Query: 682 VHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKL 741
           V+ F AG+ S  +M+ +R M   L  K R AGY PD + +L ++ E+EK   L  HSEK 
Sbjct: 726 VYSFVAGENSLPEMHKVRKMWYSLEEKIRAAGYAPDTTVMLHELEEEEKVEALRWHSEKQ 785

Query: 742 ALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSC 801
           A+AF L +    + +R+ KN+R+C DCH A K+ISK+  REI++RD  RFHHF+DG CSC
Sbjct: 786 AIAFGLLRTAGPTKVRVFKNIRMCKDCHNAAKLISKVADREIVVRDKKRFHHFRDGLCSC 845

Query: 802 GDFW 805
           GD+W
Sbjct: 846 GDYW 849



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 187/364 (51%), Gaps = 15/364 (4%)

Query: 225 EALNFFSQMRAV--GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALK-TCYEMDLYVAV 281
           +AL    ++ A   G  P+ FT    LK+C G D  +V    H  A K    + D +V  
Sbjct: 48  DALAILPRLLAASDGVAPDRFTLPPALKSCRGDDGRQV----HAVAAKLGLADGDPFVGN 103

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           +L+ +Y + G + +A ++FE M  ++++ W+ ++A  A     ++             AP
Sbjct: 104 SLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVADPRRGLELFRDCLEDLGGTAAP 163

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           ++ T V+VL  CA +   + G  +H L V+ G  +   VSN L+D+YAKCG M ++   F
Sbjct: 164 DEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAF 223

Query: 402 AESPK---RNHVTWNTMIVGYVQLGEVGKAMIMFSKM-LEEQ-VPATEVTYSSVLRACAS 456
            E+P    RN V+WN M+ GY + GE G A  +  +M +EE+ VPA E+T  SVL  C+ 
Sbjct: 224 LEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSG 283

Query: 457 LAALEPGMQVHCLTVKANYDM-DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
           L  L    ++H   V+    +   +V NALI  Y +CG +  A  VFD +      SWNA
Sbjct: 284 LPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICSKMVSSWNA 343

Query: 516 MISGYSMHGLSAEVLKVFDLMQQR-GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
           +I  ++ +G ++  +++F  M    G +P+  +   +L AC N   L  G+A    ++ N
Sbjct: 344 LIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRN 403

Query: 575 YGIE 578
            G+E
Sbjct: 404 -GLE 406



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 167/330 (50%), Gaps = 33/330 (10%)

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAF--VAPNQFTFVSVLQACATMEGLDLGNQIHSL 368
           W+ ++A  ++     DA+ +  R+  A   VAP++FT    L++C      D G Q+H++
Sbjct: 33  WNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRG----DDGRQVHAV 88

Query: 369 VVRVGLL-SDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK 427
             ++GL   D FV N+L+ +Y +CGR++++ ++F     RN V+WN ++     + +  +
Sbjct: 89  AAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAA---VADPRR 145

Query: 428 AMIMFSKMLEE---QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA 484
            + +F   LE+        E T  +VL  CA+LA  E G  VH L VK+ +D    V+N 
Sbjct: 146 GLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNV 205

Query: 485 LIDMYAKCGSITDARLVF---DMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQ--QR 539
           L+DMYAKCG + DA   F         N VSWN M+ GY+ +G +     +   MQ  +R
Sbjct: 206 LVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEER 265

Query: 540 GWRPNNLTFVGVLSACSNGGLLEQGEAY-FKSMVANYGIEPCIEHYT------SMVSLLG 592
           G   + +T + VL  CS  GL E  +     + V   G+     H T      ++++  G
Sbjct: 266 GVPADEITMLSVLPVCS--GLPELAKLRELHAFVVRRGL-----HLTGDMVPNALIAAYG 318

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           R G L  A ++ +GI     V  W AL+GA
Sbjct: 319 RCGCLLHACRVFDGI-CSKMVSSWNALIGA 347



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 98/218 (44%), Gaps = 28/218 (12%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           S  + L +C     L      H  +L+ G   D F    LL+VY++  R   A  LFD +
Sbjct: 376 SIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAV 435

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLH--REGHELNPFAFTAFLKV-----LVSM 170
            E++ +S+ T I GY+ +    E++ LF  +   + GH  +  A T+ L        V +
Sbjct: 436 EEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSALVACSELPAVRL 495

Query: 171 GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL------------ 218
           G    C   FA    L  DS  F+ +++ID +S CG V+ AR  FD L            
Sbjct: 496 GKEMHC---FALKADLCEDS--FLSSSIIDMYSKCGSVDDARVFFDRLKAKDAVSWTVMI 550

Query: 219 ----FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKAC 252
                N   +EA+  + +M   G +P+ FT+  +L AC
Sbjct: 551 TGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMAC 588



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%)

Query: 61  TSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPER 120
           ++L +C +   ++    +HC  LK   C D F ++ ++++Y K   + DA   FD +  +
Sbjct: 482 SALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAK 541

Query: 121 NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVF 180
           + +S+   I GY V+ +  EAVGL+  + REG E + F +   L      G  E   C F
Sbjct: 542 DAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDGLCFF 601


>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
          Length = 647

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 209/534 (39%), Positives = 318/534 (59%), Gaps = 11/534 (2%)

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+  Y K+G++  AR++F+EMP ++V  W+ M+A    + L+ +++  F  MR+  + P+
Sbjct: 114 LIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPD 173

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           ++   S+ + CA +  +  G Q+H+ VVR GL  D+ V ++L  +Y +CG + +      
Sbjct: 174 EYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALR 233

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
             P  N V+ NT I G  Q G+   A+  F  M    V A  VT+ S + +C+ LAAL  
Sbjct: 234 ALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQ 293

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G Q+H L +K   D  V V  +L+ MY++CG + D+  V    +  + V  +AMIS Y  
Sbjct: 294 GQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGF 353

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
           HG   + + +F  M   G  PN +TF+ +L ACS+ GL ++G   F+ M   YG++P ++
Sbjct: 354 HGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVK 413

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDF 642
           HYT +V LLGR+G L++A  LI  +P QP  +IW+ LL AC      ++    A+ +++ 
Sbjct: 414 HYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIEL 473

Query: 643 EPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTS 691
           +P D A++VLLSNI A +  WE  +            KEPG+SW+E +G +H F  GD S
Sbjct: 474 DPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGDES 533

Query: 692 HADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMP 751
           H+    I   LE +  + R+ GY PD+S V  D+ ++EKE  L  HSEKLA+AFA   +P
Sbjct: 534 HSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFLSLP 593

Query: 752 PSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
              PIR++KNLR+C DCH AIK++SK++ REI++RDV RFHHF+DG CSCGD+W
Sbjct: 594 EGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 647



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 167/360 (46%), Gaps = 27/360 (7%)

Query: 198 LIDAFSVCGCVEFARKVFD---------------GLFNDCF-EEALNFFSQMRAVGFKPN 241
           LI  +   G +E ARK+FD               GL N    EE+L FF  MR  G +P+
Sbjct: 114 LIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPD 173

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
            +    + + C GL  +   +  H   +++  + D+ V  +L  +Y + G + +      
Sbjct: 174 EYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALR 233

Query: 302 EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL 361
            +P  +++  +  I+   Q   +  A+E FC MR A V  N  TFVS + +C+ +  L  
Sbjct: 234 ALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQ 293

Query: 362 GNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQ 421
           G QIH+L ++ G+   V V  +L+ +Y++CG + +S  +  E    + V  + MI  Y  
Sbjct: 294 GQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGF 353

Query: 422 LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVV 481
            G   KA+ +F +M+       EVT+ ++L AC+     + GM    L  K  Y +   V
Sbjct: 354 HGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTK-TYGLQPSV 412

Query: 482 AN--ALIDMYAKCGSITDAR-LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
            +   ++D+  + G + +A  L+  M    + V W  ++S       + +  K FD+ ++
Sbjct: 413 KHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLS-------ACKTQKKFDMAER 465



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 161/364 (44%), Gaps = 22/364 (6%)

Query: 71  DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQ 130
           D  TA  +  ++ K+    ++ + N+L+  YVK   L  A KLFDEMP RN  ++   + 
Sbjct: 92  DFPTARGLFERIPKR----NVMSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVA 147

Query: 131 GYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDS 190
           G T S    E++G F  + REG + + +   +  +    +        V A V + G D 
Sbjct: 148 GLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDR 207

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMR 234
           +  VG++L   +  CG +         L                 N   E AL FF  MR
Sbjct: 208 DMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMR 267

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
             G + N  TF   + +C  L  +   +  H  A+KT  +  + V  +L+ +Y++ G + 
Sbjct: 268 GAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLG 327

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
           ++ R+  E    D++  S MI+ Y        AV LF +M  A   PN+ TF+++L AC+
Sbjct: 328 DSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACS 387

Query: 355 TMEGLDLGNQIHSLVVRV-GLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTW 412
                D G     L+ +  GL   V     ++D+  + G +  + +L    P + + V W
Sbjct: 388 HSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIW 447

Query: 413 NTMI 416
            T++
Sbjct: 448 KTLL 451



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 112/227 (49%), Gaps = 1/227 (0%)

Query: 377 DVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML 436
           +V   N L+  Y K G +E + +LF E P RN  TWN M+ G    G   +++  F  M 
Sbjct: 107 NVMSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMR 166

Query: 437 EEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSIT 496
            E +   E    S+ R CA L  +  G QVH   V++  D D+ V ++L  MY +CG + 
Sbjct: 167 REGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLR 226

Query: 497 DARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS 556
           D       +   N VS N  ISG + +G +   L+ F LM+  G   N +TFV  +++CS
Sbjct: 227 DGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCS 286

Query: 557 NGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKL 603
           +   L QG+    ++    G++  +   TS+V +  R G L  + ++
Sbjct: 287 DLAALAQGQQ-IHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERV 332



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 8/160 (5%)

Query: 420 VQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDV 479
           ++L   G+      +   E + +    +S + RAC +L  L    Q+H     +    D 
Sbjct: 21  IRLCSTGRVKEALHRRFREGLWSEPGLFSHIFRACQALPLLR---QLHAFAATSGAAADR 77

Query: 480 VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
             AN L+  YA  G    AR +F+ +   N +SWN +I GY  +G      K+FD M  R
Sbjct: 78  FTANHLLLAYADLGDFPTARGLFERIPKRNVMSWNILIGGYVKNGDLETARKLFDEMPAR 137

Query: 540 GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
               N  T+  +++  +N GL E+   +F +M    G++P
Sbjct: 138 ----NVATWNAMVAGLTNSGLNEESLGFFFAM-RREGMQP 172


>gi|168066429|ref|XP_001785140.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162663262|gb|EDQ50036.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 922

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 261/779 (33%), Positives = 404/779 (51%), Gaps = 35/779 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N +S+ + L +C     L+    IH  + K G   D+  +  L+N+Y K   L  A K+F
Sbjct: 151 NQNSFISILSACQTPIVLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVF 210

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           +EM ERN +S+   I GY       EA  LF  L R G + N  +F + L    +    E
Sbjct: 211 NEMRERNVVSWTAMISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLE 270

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL--------------FN 220
               + A + + G +    VG ALI  ++ CG +  AR+VFD L              + 
Sbjct: 271 QGLKLHAYIKQAGLEQEVLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYG 330

Query: 221 DCF-EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           + F EEA   F  M+  GF+P+ FT+A +L  C     +   K  H   ++T +E D+ V
Sbjct: 331 EGFMEEAFRLFRDMQQKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTV 390

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
           A AL+ +Y K G +  AR++F +MP+K+ + W+  IA   +     +A ++F +MR+  V
Sbjct: 391 ATALISMYAKCGSLEEARKVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDV 450

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
            P+  TF+++L +C + E  + G  IH  + + G+LS+  V+NAL+ +Y +CG++ ++ E
Sbjct: 451 IPDHVTFITLLNSCTSPEDFERGRYIHGKIDQWGMLSNNLVANALISMYGRCGKLADARE 510

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +F    +R+  +WN MI  YVQ G  G A  +F K   E     + T+ +VLRA A+L  
Sbjct: 511 VFYRIRRRDLGSWNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYTFINVLRAIANLED 570

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
           L+ G ++H L  KA  + D+ +   LI MY+KCGS+ DA  VF  + + + V WNAM++ 
Sbjct: 571 LDAGRKIHGLVEKAGLEKDIRILTTLIKMYSKCGSLRDAYSVFKNVQEKDVVCWNAMLAA 630

Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
           Y+      + LK+F  M+  G  P++ T+  VL+AC+  G +E G+  F + +    +E 
Sbjct: 631 YNHSDHGQDALKLFQQMRLEGVNPDSATYTSVLNACARLGAIEHGKK-FHTQLKEAAMET 689

Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHI 639
              HY  MV+ LGRA  L +A + IE I  +   ++W +LL AC IH+NV +   + +H+
Sbjct: 690 DTRHYACMVAALGRASLLKEAEEFIEEISSESDALMWESLLVACRIHHNVGLAETAVEHL 749

Query: 640 LDFEPEDE-ATHVLLSNIYAMARSWE-----KAASKEPGL-----SWIENQGMVHYFRAG 688
           LD + +   A    L NIYA A  WE     KA  +E GL       IE     H F   
Sbjct: 750 LDVKAQSSPAVCEQLMNIYAAAGRWEDVSVIKATMREAGLLAPKSCTIEVNSEFHTFM-- 807

Query: 689 DTSHADMNI-IRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVH-SEKLALAFA 746
            T+H    I +   +E L  K    G++ D      D RE E+   L+ H  E LA+A+ 
Sbjct: 808 -TNHFSPQIGVEDKIEELVWKMMDKGFLLDPHYAPNDSREKER---LFSHCPELLAVAYG 863

Query: 747 LFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           L   PP   +R + +  +    H  +K ISK   R I +RD + FH+F+DG CSCGD+W
Sbjct: 864 LEHTPPGVLVRCVTDSPVTDPSHRMLKFISKAYNRGIFVRDPNCFHNFKDGICSCGDYW 922



 Score =  294 bits (752), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 182/621 (29%), Positives = 310/621 (49%), Gaps = 26/621 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N + YA  LQ C+Q   L     +H  +       D++  N+L+++Y K   + DA  +F
Sbjct: 50  NLNFYARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDANNVF 109

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             M +++ +S+   I GY +  +  EAV LF  + REG + N  +F + L    +    E
Sbjct: 110 QSMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTPIVLE 169

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF----------- 223
               + + + K G++S+  V TALI+ +  CG +E ARKVF+ +                
Sbjct: 170 FGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYV 229

Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                +EA   F ++   G +PN  +FA +L AC   + +      H    +   E ++ 
Sbjct: 230 QHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVL 289

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V  AL+ +Y + G ++NAR++F+ +   + + W+ MIA Y +  +  +A  LF  M+Q  
Sbjct: 290 VGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYGEGFME-EAFRLFRDMQQKG 348

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
             P++FT+ S+L  CA    L+ G ++HS +VR    +DV V+ AL+ +YAKCG +E + 
Sbjct: 349 FQPDRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKCGSLEEAR 408

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
           ++F + P++N V+WN  I    + G   +A  +F +M  + V    VT+ ++L +C S  
Sbjct: 409 KVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPE 468

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
             E G  +H    +     + +VANALI MY +CG + DAR VF  +   +  SWNAMI+
Sbjct: 469 DFERGRYIHGKIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRIRRRDLGSWNAMIA 528

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
            Y  HG +     +F   +  G + +  TF+ VL A +N   L+ G      +V   G+E
Sbjct: 529 AYVQHGANGSAFDLFIKYKSEGGKGDKYTFINVLRAIANLEDLDAGRK-IHGLVEKAGLE 587

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIG----RL 634
             I   T+++ +  + G L  A  + + +  +  V+ W A+L A   +N+ + G    +L
Sbjct: 588 KDIRILTTLIKMYSKCGSLRDAYSVFKNVQ-EKDVVCWNAMLAA---YNHSDHGQDALKL 643

Query: 635 SAQHILDFEPEDEATHVLLSN 655
             Q  L+    D AT+  + N
Sbjct: 644 FQQMRLEGVNPDSATYTSVLN 664



 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 138/392 (35%), Positives = 230/392 (58%), Gaps = 3/392 (0%)

Query: 237 GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNA 296
           G + N   +A  L+ C+   ++   K  H       +E D+Y+   L+ +Y+K G I +A
Sbjct: 46  GVQANLNFYARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDA 105

Query: 297 RRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM 356
             +F+ M  KDV+ W+ MI+ YA      +AV+LF +M++  + PNQ +F+S+L AC T 
Sbjct: 106 NNVFQSMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTP 165

Query: 357 EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMI 416
             L+ G QIHS + + G  SDV VS AL+++Y KCG +E + ++F E  +RN V+W  MI
Sbjct: 166 IVLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMI 225

Query: 417 VGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD 476
            GYVQ G+  +A ++F K++       +V+++S+L AC +   LE G+++H    +A  +
Sbjct: 226 SGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLE 285

Query: 477 MDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLM 536
            +V+V NALI MYA+CGS+ +AR VFD +   N VSWNAMI+GY   G   E  ++F  M
Sbjct: 286 QEVLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYG-EGFMEEAFRLFRDM 344

Query: 537 QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGH 596
           QQ+G++P+  T+  +L+ C++   L +G+    S +     E  +   T+++S+  + G 
Sbjct: 345 QQKGFQPDRFTYASLLAICADRADLNRGKE-LHSQIVRTAWEADVTVATALISMYAKCGS 403

Query: 597 LDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
           L++A K+   +P + + + W A +  C  H +
Sbjct: 404 LEEARKVFNQMP-EKNAVSWNAFIACCCRHGS 434


>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840 [Vitis vinifera]
          Length = 713

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 239/664 (35%), Positives = 372/664 (56%), Gaps = 40/664 (6%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           DL  +N  L   VK   L +A ++FD+M +++ IS+ T I GY  ++   EA+ LF  + 
Sbjct: 48  DLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMR 107

Query: 150 RE-GHELNPFAFTAFLKVL---VSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVC 205
            E G  ++PF  +   K       + + EL   +     K G  ++ FVG+AL+D ++  
Sbjct: 108 VESGLRIDPFILSLAHKACGLNSDVNYGEL---LHGYAVKTGLVNSVFVGSALLDMYTKN 164

Query: 206 GCVEFARKVF---------------DGLFNDCF-EEALNFFSQMRAVGFKPNNFTFAFVL 249
           G +   R+VF                GL    + +EAL +FS+M     + +++TFA  L
Sbjct: 165 GKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIAL 224

Query: 250 KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
           KAC     +   +  H  A+K  +++  +VA  L  +Y K G++     +FE+M  +DV+
Sbjct: 225 KACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVV 284

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
            W+ +I    Q      AV+ F RMR++ V+PN++TF +V+  CA +  ++ G Q+H+L+
Sbjct: 285 SWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALI 344

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAM 429
           + +GL + + V N++M +YAKCG++ +S  +F E  +R+ V+W+T+I GY Q G V +A 
Sbjct: 345 LHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAF 404

Query: 430 IMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMY 489
            + S M  E    TE   +SVL AC ++A LE G Q+H   +    +   +V +ALI+MY
Sbjct: 405 ELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMY 464

Query: 490 AKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFV 549
            KCGSI +A  +FD   + + VSW AMI+GY+ HG S EV+ +F+ + + G RP+++TF+
Sbjct: 465 CKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFI 524

Query: 550 GVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF 609
           GVLSACS+ GL++ G  YF +M   Y I P  EHY  M+ LL RAG L  A  +IE +PF
Sbjct: 525 GVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPF 584

Query: 610 QPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS- 668
               ++W  LL AC +H +VE GR +A+ IL  EP    TH+ L+NIYA    W +AA  
Sbjct: 585 HRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADI 644

Query: 669 ----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKS------RKA 712
                     KEPG SWI+ + +V  F AGD SH     I  ML+ L  ++      ++ 
Sbjct: 645 RKLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLASRTELADCVQET 704

Query: 713 GYIP 716
           G++P
Sbjct: 705 GFLP 708



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/479 (27%), Positives = 225/479 (46%), Gaps = 18/479 (3%)

Query: 64  QSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTI 123
           ++C  N D+     +H   +K G    +F  + LL++Y K  ++ +  ++F EMP RN +
Sbjct: 124 KACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVV 183

Query: 124 SFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACV 183
           S+   I G   +    EA+  FS + R   E + + F   LK     G       + A  
Sbjct: 184 SWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQA 243

Query: 184 YKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-FNDCF---------------EEAL 227
            K G D ++FV   L   ++ CG +E+   +F+ +   D                 E A+
Sbjct: 244 MKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAV 303

Query: 228 NFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLY 287
             F +MR     PN +TFA V+  C  L  I   +  H   L       L V  +++ +Y
Sbjct: 304 QAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMY 363

Query: 288 TKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFV 347
            K G+++++  IF EM ++D++ WS +IA Y+Q     +A EL   MR     P +F   
Sbjct: 364 AKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALA 423

Query: 348 SVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKR 407
           SVL AC  M  L+ G Q+H+ V+ +GL     V +AL+++Y KCG +E +  +F  +   
Sbjct: 424 SVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAEND 483

Query: 408 NHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ-V 466
           + V+W  MI GY + G   + + +F K+    +    VT+  VL AC+    ++ G +  
Sbjct: 484 DIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYF 543

Query: 467 HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN-DWNEVSWNAMISGYSMHG 524
           + ++ K            +ID+  + G ++DA  + + M    ++V W+ ++    +HG
Sbjct: 544 NAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHG 602



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/418 (24%), Positives = 184/418 (44%), Gaps = 20/418 (4%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E++S+++A +L++C  +  L     IH Q +KKG  +  F  N L  +Y K  +L     
Sbjct: 214 EYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLT 273

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           LF++M  R+ +S+ T I       Q   AV  F  +       N + F A +    ++  
Sbjct: 274 LFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLAR 333

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------------- 219
            E    + A +  LG  ++  V  +++  ++ CG +  +  +F  +              
Sbjct: 334 IEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAG 393

Query: 220 ---NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
                   EA    S MR  G KP  F  A VL AC  +  +   K  H   L    E  
Sbjct: 394 YSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHT 453

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
             V  AL+++Y K G I  A RIF+     D++ W+ MI  YA+   S + ++LF ++ +
Sbjct: 454 AMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPR 513

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
             + P+  TF+ VL AC+    +DLG    +++  +  +         ++D+  + GR+ 
Sbjct: 514 VGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLS 573

Query: 396 NSVELFAESP-KRNHVTWNTMIVGYVQLGEVGKAMIMFSKM--LEEQVPATEVTYSSV 450
           ++  +    P  R+ V W+T++      G+V +      ++  LE     T +T +++
Sbjct: 574 DAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANI 631



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/326 (23%), Positives = 138/326 (42%), Gaps = 48/326 (14%)

Query: 23  AWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQV 82
           +W   ++    +  ++C+      +  S    N +++A  +  C     ++    +H  +
Sbjct: 285 SWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALI 344

Query: 83  LKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAV 142
           L  G    L   N ++ +Y K  +L  ++ +F EM  R+ +S+ T I GY+      EA 
Sbjct: 345 LHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAF 404

Query: 143 GLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAF 202
            L S +  EG +   FA  + L    +M   E    + A V  +G +  A V +ALI+ +
Sbjct: 405 ELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMY 464

Query: 203 SVCGCVEFARKVFDGLFNDCF----------------EEALNFFSQMRAVGFKPNNFTFA 246
             CG +E A ++FD   ND                   E ++ F ++  VG +P++ TF 
Sbjct: 465 CKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFI 524

Query: 247 FVLKAC-------LGLD---------TIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKS 290
            VL AC       LG            I  +K  +GC               ++DL  ++
Sbjct: 525 GVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGC---------------MIDLLCRA 569

Query: 291 GEISNARRIFEEMP-KKDVIPWSFMI 315
           G +S+A  + E MP  +D + WS ++
Sbjct: 570 GRLSDAEHMIEAMPFHRDDVVWSTLL 595



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 133/288 (46%), Gaps = 10/288 (3%)

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
           R+ F AP   +       C  ++ L+  N   S  +     +D+  SN  +    K G +
Sbjct: 11  RRLFTAPAVAS-----TECIDLQVLERSNDNLSQNIHFISQTDLPESNKQLKELVKTGHL 65

Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKM-LEEQVPATEVTYSSVLRA 453
            N+  +F +  +++ ++W T+I GYV   +  +A+++F  M +E  +       S   +A
Sbjct: 66  GNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKA 125

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
           C   + +  G  +H   VK      V V +AL+DMY K G I + R VF  M   N VSW
Sbjct: 126 CGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSW 185

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG-EAYFKSMV 572
            A+I+G    G + E L  F  M +     ++ TF   L AC++ G L  G E + ++M 
Sbjct: 186 TAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMK 245

Query: 573 ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
             + +   + +  ++ ++  + G L+    L E +  +  V+ W  ++
Sbjct: 246 KGFDVSSFVAN--TLATMYNKCGKLEYGLTLFEKMSMR-DVVSWTTII 290


>gi|409032180|gb|AFV08644.1| EMP5 [Zea mays]
 gi|409032182|gb|AFV08645.1| EMP5 [Zea mays]
 gi|414878626|tpg|DAA55757.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
          Length = 776

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 263/790 (33%), Positives = 406/790 (51%), Gaps = 61/790 (7%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLN-RLP-DATKLFDE 116
           Y   L+SC     L     +H  + +      LF  N LL  Y +L    P  A +L DE
Sbjct: 5   YLHLLRSCAA---LPHVAAVHAHLARAHPNASLFLRNCLLASYCRLGVGAPLHAARLLDE 61

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
           MP RN +S+   I  Y+ +     ++  F+        ++ F + A L            
Sbjct: 62  MPRRNAVSYNLVIVAYSRAGLPALSLATFARARAWARVVDRFTYAAALAACSRALDVRTG 121

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG----------------LFN 220
             V A V   G  +  F+  ++   ++ CG +  AR+VFD                 +  
Sbjct: 122 KAVHAMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAAEERDDVSWNALLSGYVRA 181

Query: 221 DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL---------GLDTIRVAKSAHGCALKT 271
              EE L  FS M   G   N+F    ++K C           +   R+A++ HGC +K 
Sbjct: 182 GAREETLEVFSLMCRHGLGWNSFALGSIIKCCASSSSYAAAGDVGGGRIAEAVHGCVVKA 241

Query: 272 CYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIA---RYAQTDLSIDAV 328
             + DL++A A++D+Y K G ++NA  +F+ +P  +VI  + MIA   R    D++ +A+
Sbjct: 242 GLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLNAMIAGFCREEAADVAREAL 301

Query: 329 ELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVY 388
            L+  ++   + P++F+F S+L+AC        G QIH  V++     DV++ +AL+D+Y
Sbjct: 302 GLYSELQSRGMQPSEFSFSSILRACNLAGEFGFGKQIHGQVLKHSFQGDVYIGSALIDLY 361

Query: 389 AKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYS 448
           +  G ME+    F   PK++ V W ++I G VQ     +A+ +F + +   +       S
Sbjct: 362 SGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQNELFEEALRLFQESVRCGLRPDVFAMS 421

Query: 449 SVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDW 508
           SV+ ACASLA    G Q+ CL VK+ ++    + N+ I M A+ G +  A   F  M   
Sbjct: 422 SVMNACASLAVARTGEQIQCLAVKSGFNRFTAMGNSFIHMCARSGDVDAATRRFQEMESR 481

Query: 509 NEVSWNAMISGYSMHGLSAEVLKVF-DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAY 567
           + VSW+A+IS ++ HG + + L VF +++  +   PN +TF+ +L+ACS+GGL+++G  Y
Sbjct: 482 DVVSWSAVISSHAHHGCARDALCVFNEMLDAKVAPPNEITFLSILTACSHGGLVDEGLRY 541

Query: 568 FKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
           +  M   YG+ P I+H T +V LLGRAG L  A   I    F    ++WR+LL +C IH 
Sbjct: 542 YGIMNDEYGLSPTIKHCTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHG 601

Query: 628 NVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWI 676
           ++E G+L A  I+D EP   A++V+L N+Y  A              E+   KEPGLSWI
Sbjct: 602 DMERGQLVADKIMDLEPTSSASYVILYNMYLDAGELSSASKTRDLMKERGVKKEPGLSWI 661

Query: 677 ENQGMVHYFRAGDTSHADMNII-RGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLW 735
           E    VH F AGD SH +   I R + E   M S+ AG                ++    
Sbjct: 662 ELSSGVHSFVAGDKSHPESKAIYRKVAE---MVSKVAGI------------SSREQDLAG 706

Query: 736 VHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQ 795
            HSEKLA+AF +  +P S+PIR++KNLR+C DCH+ +++ISK  +REII+RD  RFH F+
Sbjct: 707 CHSEKLAVAFGMIHLPQSAPIRVMKNLRVCRDCHSTMELISKSERREIILRDAIRFHRFR 766

Query: 796 DGCCSCGDFW 805
           DG CSCG +W
Sbjct: 767 DGSCSCGGYW 776



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 129/499 (25%), Positives = 249/499 (49%), Gaps = 33/499 (6%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +YA +L +C +  D++T   +H  V+  G    LF +N + ++Y +   + +A ++FD  
Sbjct: 104 TYAAALAACSRALDVRTGKAVHAMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAA 163

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLV--------- 168
            ER+ +S+   + GY  +    E + +FS + R G   N FA  + +K            
Sbjct: 164 EERDDVSWNALLSGYVRAGAREETLEVFSLMCRHGLGWNSFALGSIIKCCASSSSYAAAG 223

Query: 169 SMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN-------- 220
            +G   +   V  CV K G D++ F+ +A+ID ++  G +  A  +F  + +        
Sbjct: 224 DVGGGRIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLNA 283

Query: 221 -----------DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCAL 269
                      D   EAL  +S++++ G +P+ F+F+ +L+AC         K  HG  L
Sbjct: 284 MIAGFCREEAADVAREALGLYSELQSRGMQPSEFSFSSILRACNLAGEFGFGKQIHGQVL 343

Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVE 329
           K  ++ D+Y+  AL+DLY+ SG + +  R F  +PK+DV+ W+ +I+   Q +L  +A+ 
Sbjct: 344 KHSFQGDVYIGSALIDLYSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQNELFEEALR 403

Query: 330 LFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYA 389
           LF    +  + P+ F   SV+ ACA++     G QI  L V+ G      + N+ + + A
Sbjct: 404 LFQESVRCGLRPDVFAMSSVMNACASLAVARTGEQIQCLAVKSGFNRFTAMGNSFIHMCA 463

Query: 390 KCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQV-PATEVTYS 448
           + G ++ +   F E   R+ V+W+ +I  +   G    A+ +F++ML+ +V P  E+T+ 
Sbjct: 464 RSGDVDAATRRFQEMESRDVVSWSAVISSHAHHGCARDALCVFNEMLDAKVAPPNEITFL 523

Query: 449 SVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDAR-LVFDMM 505
           S+L AC+    ++ G++ + + +   Y +   + +   ++D+  + G + DA   + D  
Sbjct: 524 SILTACSHGGLVDEGLRYYGI-MNDEYGLSPTIKHCTCVVDLLGRAGRLADAEAFIRDSA 582

Query: 506 NDWNEVSWNAMISGYSMHG 524
              + V W ++++   +HG
Sbjct: 583 FHDDAVVWRSLLASCRIHG 601


>gi|449447749|ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Cucumis sativus]
          Length = 746

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 246/730 (33%), Positives = 387/730 (53%), Gaps = 37/730 (5%)

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A KLFD+M + N +++ + I GY   S   + + LF    R G +L+ +     L     
Sbjct: 20  ADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAGALTACSQ 79

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG------------ 217
            G       +   +   G  S   +  +LID +S CG V++AR +FD             
Sbjct: 80  SGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSL 139

Query: 218 ----LFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLG-LDTIRVAKSA-HGCALKT 271
               + N  +EE L    +M   G   N +T    LKAC    +  ++  +  H  A+K 
Sbjct: 140 IAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKL 199

Query: 272 CYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSID----- 326
              +D+ V  ALLD+Y K+G + +A +IF++M  K+V+ ++ M+A   Q +   D     
Sbjct: 200 GLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYK 259

Query: 327 AVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMD 386
           A+ LF  M+   + P+ FT+ S+L+AC  +E      Q+H+L+ + GLLSD ++ + L+D
Sbjct: 260 ALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILID 319

Query: 387 VYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVT 446
           +Y+  G M +++  F        V    MI GY+Q GE   A+ +F ++L  +    E  
Sbjct: 320 LYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLTYEEKPDEFI 379

Query: 447 YSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN 506
           +S+++ +CA++  L  G Q+     K       +  N+ I MYAK G +  A L F  M 
Sbjct: 380 FSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQME 439

Query: 507 DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEA 566
           + + VSW+ MI   + HG + E L+ F+LM+  G  PN+  F+GVL ACS+ GL+E+G  
Sbjct: 440 NPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLR 499

Query: 567 YFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH 626
           YF +M  +Y ++  ++H   +V LLGRAG L  A  LI  + F+   ++WRALL AC IH
Sbjct: 500 YFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSACRIH 559

Query: 627 NNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSW 675
            +    +  AQ +++ EP   A++VLL NIY  A +            E+   KEPGLSW
Sbjct: 560 KDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAASKVRTLMEERRIKKEPGLSW 619

Query: 676 IENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLW 735
           I+    V+ F +GD SH +   I   L+ +   +++     D   +L    E E    + 
Sbjct: 620 IQIGDKVYSFVSGDRSHKNSGQIYAKLDEMLATTKRLDSAKD---ILGYKIEHEHLTNVN 676

Query: 736 VHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQ 795
            HSEKLA+AF +  +  S+P+R++KNLRIC+DCH  +K+ S + +RE+I+RD  RFHHF+
Sbjct: 677 YHSEKLAVAFGVLYLSESAPVRVMKNLRICLDCHMTMKLFSIVEKRELIVRDSVRFHHFK 736

Query: 796 DGCCSCGDFW 805
           DG CSCGD+W
Sbjct: 737 DGSCSCGDYW 746



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 134/517 (25%), Positives = 239/517 (46%), Gaps = 32/517 (6%)

Query: 38  QCSNSTTTPITFSVS-----EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLF 92
           Q SN     I F  +     + + ++ A +L +C Q+ +L     IH  +L  G    + 
Sbjct: 44  QMSNLDKVMILFDKARRLGLKLDKYNCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVV 103

Query: 93  ATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREG 152
            TN L+++Y K  ++  A  LFD   + + +S+ + I GY  + ++ E + +   +H+ G
Sbjct: 104 LTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNG 163

Query: 153 HELNPFAFTAFLKVLVS--MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEF 210
              N +   + LK   S   G       +     KLG   +  VGTAL+D ++  G ++ 
Sbjct: 164 LAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDD 223

Query: 211 ARKVFD---------------GLF------NDCFEEALNFFSQMRAVGFKPNNFTFAFVL 249
           A ++FD               GL       + C  +ALN F +M++ G KP+ FT++ +L
Sbjct: 224 AIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLL 283

Query: 250 KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
           KAC+ ++  + AK  H    K     D Y+   L+DLY+  G + +A   F  +    ++
Sbjct: 284 KACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIV 343

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
           P + MI  Y Q      A+ LF  +      P++F F +++ +CA M  L  G QI    
Sbjct: 344 PMTAMIFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTIMSSCANMGMLRSGEQIQGHA 403

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAM 429
            +VG+       N+ + +YAK G +  +   F +    + V+W+TMI    Q G   +A+
Sbjct: 404 TKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEAL 463

Query: 430 IMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALID 487
             F  M    +      +  VL AC+    +E G++ +  T++ +Y M + V +   ++D
Sbjct: 464 RFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLR-YFDTMEKDYKMKLHVKHCVCVVD 522

Query: 488 MYAKCGSITDAR-LVFDMMNDWNEVSWNAMISGYSMH 523
           +  + G + DA  L+  +  +   V W A++S   +H
Sbjct: 523 LLGRAGRLADAESLILRLGFEHEPVMWRALLSACRIH 559



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 151/274 (55%), Gaps = 7/274 (2%)

Query: 289 KSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVS 348
           K G+  +A ++F++M K +++ ++ +I+ Y Q       + LF + R+  +  +++    
Sbjct: 13  KCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAG 72

Query: 349 VLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRN 408
            L AC+    L  G  IH L++  GL S V ++N+L+D+Y+KCG+++ +  LF  S K +
Sbjct: 73  ALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLD 132

Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS--LAALEPGMQV 466
            V+WN++I GYVQ G+  + + +  KM +  +     T  S L+AC+S        G  +
Sbjct: 133 GVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTML 192

Query: 467 HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMH--- 523
           H   +K    +DVVV  AL+DMYAK GS+ DA  +FD M D N V +NAM++G       
Sbjct: 193 HDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETI 252

Query: 524 --GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSAC 555
               + + L +F  M+  G +P+  T+  +L AC
Sbjct: 253 EDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKAC 286



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 127/245 (51%), Gaps = 8/245 (3%)

Query: 390 KCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSS 449
           KCG   ++ +LF +  K N VT+N++I GYVQ+  + K MI+F K     +   +   + 
Sbjct: 13  KCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAG 72

Query: 450 VLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWN 509
            L AC+    L  G  +H L +       VV+ N+LIDMY+KCG +  AR++FD  +  +
Sbjct: 73  ALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLD 132

Query: 510 EVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFK 569
            VSWN++I+GY  +G   E+L +   M Q G   N  T    L ACS+      G   F 
Sbjct: 133 GVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNF---NGCKMFG 189

Query: 570 SMVANYGIEPCIEH----YTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACII 625
           +M+ ++ I+  +       T+++ +  + G LD A ++ + +    +V+++ A++   + 
Sbjct: 190 TMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQM-VDKNVVMYNAMMAGLLQ 248

Query: 626 HNNVE 630
              +E
Sbjct: 249 QETIE 253


>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1174

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 250/743 (33%), Positives = 394/743 (53%), Gaps = 38/743 (5%)

Query: 98  LNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNP 157
           L  ++   +L  A ++FD +P  +  ++   I+ Y+    F  A+ L+ ++ R     N 
Sbjct: 41  LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100

Query: 158 FAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF-- 215
           + F   LK   ++        + A     G  ++ FV TALID +  C     AR VF  
Sbjct: 101 YTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAK 160

Query: 216 ------------------DGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDT 257
                              G+++      L+        G +PN  T   +L        
Sbjct: 161 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHG---GLRPNASTLVSLLPLLAQHGA 217

Query: 258 IRVAKSAHGCALKTCYEMD---LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFM 314
           +    S H   L+ C E +   + +  ALLD+Y K  ++  A R+F  MP ++ + WS +
Sbjct: 218 LFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSAL 277

Query: 315 IARYAQTDLSIDAVELFCRMR-QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
           I  +   D   +A  LF  M  +     +  +  S L+ CA++  L +G Q+H+L+ + G
Sbjct: 278 IGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSG 337

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
           + +D+  SN+L+ +YAK G +  +   F E   ++ +++  ++ G VQ G+  +A ++F 
Sbjct: 338 IHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFK 397

Query: 434 KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCG 493
           KM    +     T  S++ AC+ LAAL+ G   H   +     ++  + N+LIDMYAKCG
Sbjct: 398 KMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCG 457

Query: 494 SITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLS 553
            I  +R VFD M   + VSWN MI+GY +HGL  E   +F  M+ +G+ P+++TF+ +++
Sbjct: 458 KIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIA 517

Query: 554 ACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSV 613
           ACS+ GL+ +G+ +F +M   YGI P +EHY  MV LL R G LD+A + I+ +P +  V
Sbjct: 518 ACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADV 577

Query: 614 MIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA------ 667
            +W ALLGAC IH N+++G+  ++ I    PE     VLLSNI++ A  +++AA      
Sbjct: 578 RVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQ 637

Query: 668 -----SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVL 722
                 K PG SWIE  G +H F  GD SH     I   L+ + +  +K GY  D S VL
Sbjct: 638 KVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFVL 697

Query: 723 RDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQRE 782
           +D+ E+EKE+ L  HSEKLA+AF +  +     I + KNLR+C DCHTAIK ++ +  R 
Sbjct: 698 QDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRT 757

Query: 783 IIIRDVHRFHHFQDGCCSCGDFW 805
           II+RD +RFHHF++G CSCG+FW
Sbjct: 758 IIVRDTNRFHHFKNGQCSCGNFW 780



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 127/495 (25%), Positives = 228/495 (46%), Gaps = 29/495 (5%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N +++   L++C    DL+   TIH      G   DLF +  L+++Y++  R   A  +F
Sbjct: 99  NKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVF 158

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFT--AFLKVLVS--- 169
            +MP R+ +++   + GY     +  A+     +   G  L P A T  + L +L     
Sbjct: 159 AKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHG-GLRPNASTLVSLLPLLAQHGA 217

Query: 170 --MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL--------- 218
              G +    C+ AC+ +  ++    +GTAL+D ++ C  + +A +VF G+         
Sbjct: 218 LFQGTSIHAYCLRACLEQ--NEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWS 275

Query: 219 -------FNDCFEEALNFFSQMRAVGF-KPNNFTFAFVLKACLGLDTIRVAKSAHGCALK 270
                    D   EA N F  M   G    +  + A  L+ C  L  + +    H    K
Sbjct: 276 ALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAK 335

Query: 271 TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVEL 330
           +    DL  + +LL +Y K+G I+ A   F+E+  KD I +  +++   Q   + +A  +
Sbjct: 336 SGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLV 395

Query: 331 FCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAK 390
           F +M+   + P+  T VS++ AC+ +  L  G   H  V+  GL  +  + N+L+D+YAK
Sbjct: 396 FKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAK 455

Query: 391 CGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
           CG+++ S ++F + P R+ V+WNTMI GY   G   +A  +F  M  +     +VT+  +
Sbjct: 456 CGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICL 515

Query: 451 LRACASLAALEPGMQ-VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWN 509
           + AC+    +  G      +T K      +     ++D+ A+ G + +A      M    
Sbjct: 516 IAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKA 575

Query: 510 EVS-WNAMISGYSMH 523
           +V  W A++    +H
Sbjct: 576 DVRVWGALLGACRIH 590


>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Cucumis sativus]
          Length = 663

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 217/535 (40%), Positives = 320/535 (59%), Gaps = 12/535 (2%)

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+ L   +G I+ ARR+F  +P  D   +  ++   ++   SID V  + RM  +    +
Sbjct: 129 LISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQS 188

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
            +TF SV++ACA +  L LG +IHS V+  G  SD++V  AL+ +YAK   M+ + ++F 
Sbjct: 189 NYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFD 248

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
             P+R  + WN++I GY Q G   +++ +F  M+E        T  S+L +C+ L AL+ 
Sbjct: 249 AMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDF 308

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G  +H       +D++VV+  +LI+MY +CG+++ AR VFD M + N V+W AMISGY M
Sbjct: 309 GCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGM 368

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
           HG   + +++F  M+  G RPNN+TFV VLSAC++ GL++ G   F SM   YG+ P +E
Sbjct: 369 HGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVE 428

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEG-IPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
           H   MV + GRAG L+ A + I+  IP +P   +W ++LGAC +H N ++G   A+H+L 
Sbjct: 429 HNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLS 488

Query: 642 FEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDT 690
            EPE+   +V+LSNIYA+A   ++              K+ G S IE     + F  GD 
Sbjct: 489 VEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDK 548

Query: 691 SHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKM 750
           SH   N I   L+ L  +  ++GY+P   +++ D+ E+E++  L  HSEKLALAF L K 
Sbjct: 549 SHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFGLLKT 608

Query: 751 PPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
                IRI+KNLRIC DCH+AIK IS I  REII+RD  RFHHF+DG CSC D+W
Sbjct: 609 NQGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKDGSCSCLDYW 663



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/356 (28%), Positives = 176/356 (49%), Gaps = 22/356 (6%)

Query: 188 HDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND---CFEEALN-------------FFS 231
           H S + + T LI      G + +AR++F  + N     F+  L              F+ 
Sbjct: 120 HRSRSLL-TKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYR 178

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
           +M   G   +N+TF  V+KAC  L  +R+ K  H   +   Y  D+YV  AL+ LY K+ 
Sbjct: 179 RMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKAS 238

Query: 292 EISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQ 351
           ++  A+++F+ MP++ +I W+ +I+ Y Q  L  +++ LF  M ++   P+  T VS+L 
Sbjct: 239 DMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLS 298

Query: 352 ACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
           +C+ +  LD G  +H      G   +V +  +L+++Y +CG +  + E+F    +RN VT
Sbjct: 299 SCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVT 358

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
           W  MI GY   G   +AM +F++M         +T+ +VL ACA    ++ G +V   ++
Sbjct: 359 WTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFS-SM 417

Query: 472 KANYDMDVVVAN--ALIDMYAKCGSITDARLVFD--MMNDWNEVSWNAMISGYSMH 523
           K  Y +   V +   ++DM+ + G + DA       +  +     W +M+    MH
Sbjct: 418 KEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMH 473



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 139/264 (52%), Gaps = 2/264 (0%)

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
            Q+H+ ++  GL     +   L+ +    G +  +  LF   P  +   +++++    + 
Sbjct: 108 QQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKF 167

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
           G     ++ + +ML    P +  T++SV++ACA L+AL  G ++H   +   Y  D+ V 
Sbjct: 168 GFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQ 227

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
            ALI +YAK   +  A+ VFD M     ++WN++ISGY  +GL  E + +F LM + G++
Sbjct: 228 AALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQ 287

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           P++ T V +LS+CS  G L+ G  +        G +  +   TS++++  R G++ KA +
Sbjct: 288 PDSATIVSLLSSCSQLGALDFG-CWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKARE 346

Query: 603 LIEGIPFQPSVMIWRALLGACIIH 626
           + + +  + +V+ W A++    +H
Sbjct: 347 VFDSMK-ERNVVTWTAMISGYGMH 369



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/406 (22%), Positives = 190/406 (46%), Gaps = 31/406 (7%)

Query: 34  LSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDD-LQTAMTIHCQVLKKGNCLDLF 92
           L TQQ +     P+T     F++ S++   ++ +++   L+    +H  ++  G      
Sbjct: 70  LQTQQLA--FQHPVT---RNFDTQSHSPVHEALLRSGPRLRNLQQVHAHIIVSGLHRSRS 124

Query: 93  ATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQF---VEAVGLFSTLH 149
               L+++      +  A +LF  +P  ++  F + ++   V+S+F   ++ V  +  + 
Sbjct: 125 LLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLK---VTSKFGFSIDTVLFYRRML 181

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
             G   + + FT+ +K    +    L   + + V   G+ S+ +V  ALI  ++    ++
Sbjct: 182 FSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMK 241

Query: 210 FARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL 253
            A+KVFD +                 N   +E++  F  M   GF+P++ T   +L +C 
Sbjct: 242 VAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCS 301

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSF 313
            L  +      H  A    +++++ +  +L+++YT+ G +S AR +F+ M +++V+ W+ 
Sbjct: 302 QLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTA 361

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV- 372
           MI+ Y        A+ELF  MR     PN  TFV+VL ACA    +D G ++ S +    
Sbjct: 362 MISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAY 421

Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVELFAE-SPKR-NHVTWNTMI 416
           GL+  V  +  ++D++ + G + ++ +   +  PK      W +M+
Sbjct: 422 GLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSML 467



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 108/427 (25%), Positives = 183/427 (42%), Gaps = 79/427 (18%)

Query: 49  FSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLP 108
           FS +  +++++ + +++C     L+    IH  V+  G   D++    L+ +Y K + + 
Sbjct: 182 FSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMK 241

Query: 109 DATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLV 168
            A K+FD MP+R  I++ + I GY  +    E++GLF  +   G + +     + L    
Sbjct: 242 VAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCS 301

Query: 169 SMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------- 218
            +G  +    +       G D N  +GT+LI+ ++ CG V  AR+VFD +          
Sbjct: 302 QLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTA 361

Query: 219 ------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC 272
                  +    +A+  F++MRA G +PNN TF  VL AC           AH       
Sbjct: 362 MISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSAC-----------AH------- 403

Query: 273 YEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK-DVIPW----SFMIARYAQTDLSIDA 327
                            SG I + RR+F  M +   ++P       M+  + +  L  DA
Sbjct: 404 -----------------SGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDA 446

Query: 328 VELFCRMRQAFVA--PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD---VFVSN 382
            +      + F+   P    + S+L AC      DLG ++   V+ V   +    V +SN
Sbjct: 447 YQFI----KKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSN 502

Query: 383 ALMDVYAKCGRMENSVELFAESPKRNHVTWNTMI--VGYVQLGEVGKAMIMFSKMLEEQV 440
               +YA  GRM+  VE+      RN +T   +   VGY  + E+ +   +FS M ++  
Sbjct: 503 ----IYALAGRMDR-VEMV-----RNMMTRRRLKKQVGYSTI-EINRKTYLFS-MGDKSH 550

Query: 441 PATEVTY 447
           P T   Y
Sbjct: 551 PQTNTIY 557


>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
 gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
          Length = 724

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 223/610 (36%), Positives = 347/610 (56%), Gaps = 44/610 (7%)

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
           KP    +  +LK CL    ++  K  H   +KT   + LY++  LLD+Y K G + +A +
Sbjct: 116 KPYASIYLTLLKFCLKQRALKEGKQVHA-HIKTSGSIGLYISNRLLDMYAKCGSLVDAEK 174

Query: 299 IFEEMPKKDVIPWSFMIARYA-------------------------------QTDLSIDA 327
           +F+EM  +D+  W+ MI+ Y                                Q +   +A
Sbjct: 175 VFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEA 234

Query: 328 VELFCRM-RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMD 386
           +EL+  M +  +   N+ T  S L A A +  L +G +IH  ++R+GL SD  V  +L+D
Sbjct: 235 LELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLD 294

Query: 387 VYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVT 446
           +Y KCG +E +  +F +  +R+ V+W TMI  Y++ G   +   +F  ++   +   + T
Sbjct: 295 MYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFT 354

Query: 447 YSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN 506
           ++ VL ACA LAA + G Q+H   V+  +D     A+AL+ MY+KCG I +A+ VF+++ 
Sbjct: 355 FAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILP 414

Query: 507 DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEA 566
             +  SW +++ GY+ HG   + L  F+L+ + G +P+ + F+GVLSAC++ GL+++G  
Sbjct: 415 QPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLE 474

Query: 567 YFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH 626
           YF S+   +G+   I+HY  ++ LL RAG   +A  +I  +P +P   IW ALLG C IH
Sbjct: 475 YFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIH 534

Query: 627 NNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMA--RSWE---------KAASKEPGLSW 675
            N+E+ + +A+ + + EPE+ AT+V L+NIYA A  R+ E         +   K+PG+SW
Sbjct: 535 GNLELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKPGMSW 594

Query: 676 IENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLW 735
           IE +  VH F  GD SH     I   L  L+ + ++ GY+PD + VL DV  ++KE  L 
Sbjct: 595 IEIRREVHVFSVGDNSHPKSKEILEYLSELSKRMKEVGYVPDTNFVLHDVELEQKEENLS 654

Query: 736 VHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQ 795
            HSEKLA+AF +   P  +PI++ KNLR CVDCH AIK IS I  R+II+RD +RFH F+
Sbjct: 655 YHSEKLAVAFGIISTPSGTPIKVFKNLRTCVDCHNAIKFISNITGRKIIVRDSNRFHCFE 714

Query: 796 DGCCSCGDFW 805
            G CSC D+W
Sbjct: 715 GGSCSCKDYW 724



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 133/469 (28%), Positives = 219/469 (46%), Gaps = 58/469 (12%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           Y T L+ C++   L+    +H  +   G+ + L+ +N LL++Y K   L DA K+FDEM 
Sbjct: 122 YLTLLKFCLKQRALKEGKQVHAHIKTSGS-IGLYISNRLLDMYAKCGSLVDAEKVFDEMV 180

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
            R+  S+   I GY     F +A  LF  +       + F++TA                
Sbjct: 181 HRDLCSWNIMISGYVKGGNFEKARNLFDKMPNR----DNFSWTAI--------------- 221

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGF 238
                                    + GCV+  R           EEAL  +  M+   +
Sbjct: 222 -------------------------ISGCVQHNRP----------EEALELYRLMQKHDY 246

Query: 239 -KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR 297
            K N  T +  L A   + ++ + K  HG  ++   + D  V  +LLD+Y K G I  AR
Sbjct: 247 SKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEAR 306

Query: 298 RIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATME 357
            IF++M ++DV+ W+ MI  Y +     +   LF  +  + + PN FTF  VL ACA + 
Sbjct: 307 YIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLA 366

Query: 358 GLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIV 417
             DLG QIH+ +VRVG  S    ++AL+ +Y+KCG +EN+  +F   P+ +  +W +++V
Sbjct: 367 AEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLV 426

Query: 418 GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ-VHCLTVKANYD 476
           GY Q G+  KA+  F  +L+       + +  VL ACA    ++ G++  H +  K    
Sbjct: 427 GYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLT 486

Query: 477 MDVVVANALIDMYAKCGSITDARLVFDMMN-DWNEVSWNAMISGYSMHG 524
             +     +ID+ A+ G  T+A  + + M    ++  W A++ G  +HG
Sbjct: 487 RTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHG 535



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 169/347 (48%), Gaps = 44/347 (12%)

Query: 315 IARYAQTDLSIDAVELFC---RMRQA------FVAPNQFTFVSVLQACATMEGLDLGNQI 365
           I R   + L  +A+++ C   R+R+A         P    ++++L+ C     L  G Q+
Sbjct: 82  INRLCDSKLFKEAIDILCGQSRLREAVQLLYRIEKPYASIYLTLLKFCLKQRALKEGKQV 141

Query: 366 HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEV 425
           H+ +   G +  +++SN L+D+YAKCG + ++ ++F E   R+  +WN MI GYV+ G  
Sbjct: 142 HAHIKTSGSIG-LYISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNF 200

Query: 426 GKAMIMFSKM---------------LEEQVP-----------------ATEVTYSSVLRA 453
            KA  +F KM               ++   P                 + + T SS L A
Sbjct: 201 EKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAA 260

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
            A++ +L  G ++H   ++   D D VV  +L+DMY KCGSI +AR +FD M + + VSW
Sbjct: 261 SAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSW 320

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA 573
             MI  Y  +G   E   +F  +      PN+ TF GVL+AC++    + G+     MV 
Sbjct: 321 TTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMV- 379

Query: 574 NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
             G +      +++V +  + G ++ A  + E +P QP +  W +LL
Sbjct: 380 RVGFDSFSSAASALVHMYSKCGDIENAKSVFEILP-QPDLFSWTSLL 425


>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 221/584 (37%), Positives = 343/584 (58%), Gaps = 19/584 (3%)

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           P   TF  ++ +C   +++      H   + + ++ D ++A  L+++Y + G I  AR++
Sbjct: 76  PTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKV 135

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATME-- 357
           F+E  ++ +  W+ +    A      + ++L+ +M    +  ++FT+  VL+AC   E  
Sbjct: 136 FDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELS 195

Query: 358 --GLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTM 415
              L  G +IH+ ++R G  +++ V   L+DVYAK G +  +  +F   P +N V+W+ M
Sbjct: 196 VSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAM 255

Query: 416 IVGYVQLGEVGKAMIMFSKMLEE---QVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
           I  + +     KA+ +F  M+ E    VP + VT  +VL+ACA LAALE G  +H   ++
Sbjct: 256 IACFAKNEMPMKALELFQLMMLEAHDSVPNS-VTMVNVLQACAGLAALEQGKLIHGYILR 314

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
              D  + V NALI MY +CG I   + VFD M + + VSWN++IS Y MHG   + +++
Sbjct: 315 RGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQI 374

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
           F+ M  +G  P+ ++F+ VL ACS+ GL+E+G+  F+SM++ Y I P +EHY  MV LLG
Sbjct: 375 FENMIHQGSSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLG 434

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVL 652
           RA  LD+A KLIE + F+P   +W +LLG+C IH NVE+   ++  + + EP +   +VL
Sbjct: 435 RANRLDEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTLLFELEPRNAGNYVL 494

Query: 653 LSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGM 701
           L++IYA A+ W +A S           K PG SWIE +  V+ F + D  +  +  I  +
Sbjct: 495 LADIYAEAKMWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHAL 554

Query: 702 LEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKN 761
           L  L+ + +  GY+P  + VL D+ E+EKER +  HSEKLA+AF L        IRI KN
Sbjct: 555 LVKLSNEMKAQGYVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTVKGETIRIRKN 614

Query: 762 LRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           LR+C DCH   K ISK   REI++RDV+RFHHF+DG CSCGD+W
Sbjct: 615 LRLCEDCHAVTKFISKFANREILVRDVNRFHHFKDGVCSCGDYW 658



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/362 (24%), Positives = 167/362 (46%), Gaps = 23/362 (6%)

Query: 65  SCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTIS 124
           SC Q + L   + +H +++  G   D F    L+N+Y +L  +  A K+FDE  ER    
Sbjct: 87  SCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKVFDETRERTIYV 146

Query: 125 FVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLV----SMGWAELCPCVF 180
           +    +   +     E + L+  ++  G   + F +T  LK  V    S+   +    + 
Sbjct: 147 WNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIH 206

Query: 181 ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND----------CFE------ 224
           A + + G+++N  V T L+D ++  G V +A  VF  +             CF       
Sbjct: 207 AHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPM 266

Query: 225 EALNFFSQM--RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
           +AL  F  M   A    PN+ T   VL+AC GL  +   K  HG  L+   +  L V  A
Sbjct: 267 KALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNA 326

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+ +Y + GEI   +R+F+ M  +DV+ W+ +I+ Y        A+++F  M     +P+
Sbjct: 327 LITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPS 386

Query: 343 QFTFVSVLQACATMEGLDLGNQI-HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
             +F++VL AC+    ++ G  +  S++ +  +   +     ++D+  +  R++ +++L 
Sbjct: 387 YISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLI 446

Query: 402 AE 403
            +
Sbjct: 447 ED 448



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/271 (22%), Positives = 112/271 (41%), Gaps = 27/271 (9%)

Query: 58  SYATSLQSCIQND----DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
           +Y   L++C+ ++     LQ    IH  +L+ G   ++     LL+VY K   +  A  +
Sbjct: 181 TYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSV 240

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTA--FLKVLVSMG 171
           F  MP +N +S+   I  +  +   ++A+ LF  +  E H+  P + T    L+    + 
Sbjct: 241 FCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLA 300

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF-------- 223
             E    +   + + G DS   V  ALI  +  CG +   ++VFD + N           
Sbjct: 301 ALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLIS 360

Query: 224 --------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCAL---KTC 272
                   ++A+  F  M   G  P+  +F  VL AC     +   K      L   +  
Sbjct: 361 IYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIH 420

Query: 273 YEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
             M+ Y    ++DL  ++  +  A ++ E+M
Sbjct: 421 PGMEHY--ACMVDLLGRANRLDEAIKLIEDM 449



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 28/120 (23%), Positives = 52/120 (43%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           NS +    LQ+C     L+    IH  +L++G    L   N L+ +Y +   +    ++F
Sbjct: 285 NSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVF 344

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D M  R+ +S+ + I  Y +     +A+ +F  +  +G   +  +F   L      G  E
Sbjct: 345 DNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLVE 404


>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 591

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 221/562 (39%), Positives = 329/562 (58%), Gaps = 15/562 (2%)

Query: 255 LDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFM 314
           L  I      HG +L    +M  ++   ++ L   S  +S A  +F  +   +V  W+ +
Sbjct: 34  LKQIHAFSIRHGVSLNNP-DMGKHLIFTIVSL---SAPMSYAYNVFTVIHNPNVFTWNTI 89

Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL 374
           I  YA++D    A   + +M  + V P+  T+  +L+A +    +  G  IHS+ +R G 
Sbjct: 90  IRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGF 149

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
            S VFV N+L+ +YA CG  E++ ++F    +R+ V WN+MI G+   G   +A+ +F +
Sbjct: 150 ESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFRE 209

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGS 494
           M  E V     T  S+L A A L ALE G +VH   +K     +  V N+L+D+YAKCG+
Sbjct: 210 MSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGA 269

Query: 495 ITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSA 554
           I +A+ VF  M++ N VSW ++I G +++G   E L++F  M+ +G  P+ +TFVGVL A
Sbjct: 270 IREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYA 329

Query: 555 CSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVM 614
           CS+ G+L++G  YF+ M    GI P IEHY  MV LL RAG + +A + I+ +P QP+ +
Sbjct: 330 CSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAV 389

Query: 615 IWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW----------- 663
           IWR LLGAC IH ++ +G ++  H+L+ EP+    +VLLSN+YA  R W           
Sbjct: 390 IWRTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLYASERRWSDVQVIRRSML 449

Query: 664 EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLR 723
           +    K PG S +E    V+ F  GD SH     +  +LE +    +  GY+P  + VL 
Sbjct: 450 KDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEKITELLKLEGYVPHTANVLA 509

Query: 724 DVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREI 783
           D+ E+EKE+ L  HSEK+A+AF L   PP +PIR++KNLR+C DCH AIK+I+KI  REI
Sbjct: 510 DIEEEEKEQALSYHSEKVAIAFMLLNTPPGTPIRVMKNLRVCADCHMAIKLIAKIYDREI 569

Query: 784 IIRDVHRFHHFQDGCCSCGDFW 805
           +IRD  RFHHF+ G CSC D+W
Sbjct: 570 VIRDRSRFHHFRGGSCSCKDYW 591



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 202/423 (47%), Gaps = 35/423 (8%)

Query: 111 TKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELN-PFAFTAFLKVLVS 169
           T      PE      ++ +Q    S   ++ +  FS   R G  LN P      +  +VS
Sbjct: 6   TNFVSTTPENPLTKCISLLQFCASSKHKLKQIHAFSI--RHGVSLNNPDMGKHLIFTIVS 63

Query: 170 MGWAELCPCVFAC-VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALN 228
           +      P  +A  V+ + H+ N F    +I  ++                +D    A  
Sbjct: 64  LS----APMSYAYNVFTVIHNPNVFTWNTIIRGYAE---------------SDNPSPAFL 104

Query: 229 FFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYT 288
           F+ QM     +P+  T+ F+LKA      +R  ++ H   ++  +E  ++V  +LL +Y 
Sbjct: 105 FYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYA 164

Query: 289 KSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVS 348
             G+  +A ++FE M ++D++ W+ MI  +A      +A+ LF  M    V P+ FT VS
Sbjct: 165 ACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVS 224

Query: 349 VLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRN 408
           +L A A +  L+LG ++H  +++VGL  +  V+N+L+D+YAKCG +  +  +F+E  +RN
Sbjct: 225 LLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERN 284

Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG----- 463
            V+W ++IVG    G   +A+ +F +M  + +  +E+T+  VL AC+    L+ G     
Sbjct: 285 AVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFR 344

Query: 464 -MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYS 521
            M+  C  +       +     ++D+ ++ G +  A   + +M    N V W  ++   +
Sbjct: 345 RMKEECGIIP-----RIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACT 399

Query: 522 MHG 524
           +HG
Sbjct: 400 IHG 402



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/294 (25%), Positives = 135/294 (45%), Gaps = 30/294 (10%)

Query: 47  ITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNR 106
           +  S  E ++H+Y   L++  ++ +++    IH   ++ G    +F  N LL++Y     
Sbjct: 109 MVVSCVEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGD 168

Query: 107 LPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV 166
              A K+F+ M ER+ +++ + I G+ ++ +  EA+ LF  +  EG E + F   + L  
Sbjct: 169 TESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSA 228

Query: 167 LVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------- 216
              +G  EL   V   + K+G   N+ V  +L+D ++ CG +  A++VF           
Sbjct: 229 SAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSW 288

Query: 217 -----GLFNDCF-EEALNFFSQMRAVGFKPNNFTFAFVLKACL-------GLDTIRVAKS 263
                GL  + F EEAL  F +M   G  P+  TF  VL AC        G +  R  K 
Sbjct: 289 TSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKE 348

Query: 264 AHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
             G   +    ++ Y    ++DL +++G +  A    + MP + + + W  ++ 
Sbjct: 349 ECGIIPR----IEHY--GCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLG 396


>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Cucumis sativus]
          Length = 599

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 217/535 (40%), Positives = 320/535 (59%), Gaps = 12/535 (2%)

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+ L   +G I+ ARR+F  +P  D   +  ++   ++   SID V  + RM  +    +
Sbjct: 65  LISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQS 124

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
            +TF SV++ACA +  L LG +IHS V+  G  SD++V  AL+ +YAK   M+ + ++F 
Sbjct: 125 NYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFD 184

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
             P+R  + WN++I GY Q G   +++ +F  M+E        T  S+L +C+ L AL+ 
Sbjct: 185 AMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDF 244

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G  +H       +D++VV+  +LI+MY +CG+++ AR VFD M + N V+W AMISGY M
Sbjct: 245 GCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGM 304

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
           HG   + +++F  M+  G RPNN+TFV VLSAC++ GL++ G   F SM   YG+ P +E
Sbjct: 305 HGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVE 364

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEG-IPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
           H   MV + GRAG L+ A + I+  IP +P   +W ++LGAC +H N ++G   A+H+L 
Sbjct: 365 HNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLS 424

Query: 642 FEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDT 690
            EPE+   +V+LSNIYA+A   ++              K+ G S IE     + F  GD 
Sbjct: 425 VEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDK 484

Query: 691 SHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKM 750
           SH   N I   L+ L  +  ++GY+P   +++ D+ E+E++  L  HSEKLALAF L K 
Sbjct: 485 SHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFGLLKT 544

Query: 751 PPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
                IRI+KNLRIC DCH+AIK IS I  REII+RD  RFHHF+DG CSC D+W
Sbjct: 545 NQGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKDGSCSCLDYW 599



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/356 (28%), Positives = 176/356 (49%), Gaps = 22/356 (6%)

Query: 188 HDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND---CFEEALN-------------FFS 231
           H S + + T LI      G + +AR++F  + N     F+  L              F+ 
Sbjct: 56  HRSRSLL-TKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYR 114

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
           +M   G   +N+TF  V+KAC  L  +R+ K  H   +   Y  D+YV  AL+ LY K+ 
Sbjct: 115 RMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKAS 174

Query: 292 EISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQ 351
           ++  A+++F+ MP++ +I W+ +I+ Y Q  L  +++ LF  M ++   P+  T VS+L 
Sbjct: 175 DMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLS 234

Query: 352 ACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
           +C+ +  LD G  +H      G   +V +  +L+++Y +CG +  + E+F    +RN VT
Sbjct: 235 SCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVT 294

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
           W  MI GY   G   +AM +F++M         +T+ +VL ACA    ++ G +V   ++
Sbjct: 295 WTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFS-SM 353

Query: 472 KANYDMDVVVAN--ALIDMYAKCGSITDARLVFD--MMNDWNEVSWNAMISGYSMH 523
           K  Y +   V +   ++DM+ + G + DA       +  +     W +M+    MH
Sbjct: 354 KEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMH 409



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 139/264 (52%), Gaps = 2/264 (0%)

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
            Q+H+ ++  GL     +   L+ +    G +  +  LF   P  +   +++++    + 
Sbjct: 44  QQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKF 103

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
           G     ++ + +ML    P +  T++SV++ACA L+AL  G ++H   +   Y  D+ V 
Sbjct: 104 GFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQ 163

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
            ALI +YAK   +  A+ VFD M     ++WN++ISGY  +GL  E + +F LM + G++
Sbjct: 164 AALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQ 223

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           P++ T V +LS+CS  G L+ G  +        G +  +   TS++++  R G++ KA +
Sbjct: 224 PDSATIVSLLSSCSQLGALDFG-CWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKARE 282

Query: 603 LIEGIPFQPSVMIWRALLGACIIH 626
           + + +  + +V+ W A++    +H
Sbjct: 283 VFDSMK-ERNVVTWTAMISGYGMH 305



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/406 (22%), Positives = 190/406 (46%), Gaps = 31/406 (7%)

Query: 34  LSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDD-LQTAMTIHCQVLKKGNCLDLF 92
           L TQQ +     P+T     F++ S++   ++ +++   L+    +H  ++  G      
Sbjct: 6   LQTQQLA--FQHPVT---RNFDTQSHSPVHEALLRSGPRLRNLQQVHAHIIVSGLHRSRS 60

Query: 93  ATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQF---VEAVGLFSTLH 149
               L+++      +  A +LF  +P  ++  F + ++   V+S+F   ++ V  +  + 
Sbjct: 61  LLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLK---VTSKFGFSIDTVLFYRRML 117

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
             G   + + FT+ +K    +    L   + + V   G+ S+ +V  ALI  ++    ++
Sbjct: 118 FSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMK 177

Query: 210 FARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL 253
            A+KVFD +                 N   +E++  F  M   GF+P++ T   +L +C 
Sbjct: 178 VAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCS 237

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSF 313
            L  +      H  A    +++++ +  +L+++YT+ G +S AR +F+ M +++V+ W+ 
Sbjct: 238 QLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTA 297

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV- 372
           MI+ Y        A+ELF  MR     PN  TFV+VL ACA    +D G ++ S +    
Sbjct: 298 MISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAY 357

Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVELFAE-SPKR-NHVTWNTMI 416
           GL+  V  +  ++D++ + G + ++ +   +  PK      W +M+
Sbjct: 358 GLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSML 403



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 108/427 (25%), Positives = 183/427 (42%), Gaps = 79/427 (18%)

Query: 49  FSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLP 108
           FS +  +++++ + +++C     L+    IH  V+  G   D++    L+ +Y K + + 
Sbjct: 118 FSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMK 177

Query: 109 DATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLV 168
            A K+FD MP+R  I++ + I GY  +    E++GLF  +   G + +     + L    
Sbjct: 178 VAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCS 237

Query: 169 SMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------- 218
            +G  +    +       G D N  +GT+LI+ ++ CG V  AR+VFD +          
Sbjct: 238 QLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTA 297

Query: 219 ------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC 272
                  +    +A+  F++MRA G +PNN TF  VL AC           AH       
Sbjct: 298 MISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSAC-----------AH------- 339

Query: 273 YEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK-DVIPW----SFMIARYAQTDLSIDA 327
                            SG I + RR+F  M +   ++P       M+  + +  L  DA
Sbjct: 340 -----------------SGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDA 382

Query: 328 VELFCRMRQAFVA--PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD---VFVSN 382
            +      + F+   P    + S+L AC      DLG ++   V+ V   +    V +SN
Sbjct: 383 YQFI----KKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSN 438

Query: 383 ALMDVYAKCGRMENSVELFAESPKRNHVTWNTMI--VGYVQLGEVGKAMIMFSKMLEEQV 440
               +YA  GRM+  VE+      RN +T   +   VGY  + E+ +   +FS M ++  
Sbjct: 439 ----IYALAGRMDR-VEMV-----RNMMTRRRLKKQVGYSTI-EINRKTYLFS-MGDKSH 486

Query: 441 PATEVTY 447
           P T   Y
Sbjct: 487 PQTNTIY 493


>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
 gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 229/570 (40%), Positives = 334/570 (58%), Gaps = 16/570 (2%)

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
           V+KAC  L      K  H   LK  +E D++VA +L+ +Y++ G + +AR++F++MP +D
Sbjct: 3   VVKACGDLLD---GKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARD 59

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
              W+ MI+ Y Q   + +A+++   MR   V  +  T  SVL  CA +  +  G  IH 
Sbjct: 60  RGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHL 119

Query: 368 LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK 427
            V++ GL  ++FVSNAL+++YAK G + ++ ++F    K + V+WNT+I GY Q G   +
Sbjct: 120 YVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLIK-DVVSWNTLITGYAQNGLASE 178

Query: 428 AMIMFSKMLE-EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALI 486
           A+ ++  M E E++   + T+ S+L A + + AL+ GM++H   +K     DV V   LI
Sbjct: 179 AIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLI 238

Query: 487 DMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNL 546
           DMY KCG + DA  +F  +   N V WNAMIS Y +HG   + L++F  M+    +P+++
Sbjct: 239 DMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHI 298

Query: 547 TFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEG 606
           TFV +LSACS+ GL+   +  F  M   YGI+P ++HY  MV L GRAG L+ A   I+ 
Sbjct: 299 TFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKK 358

Query: 607 IPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE-- 664
           +P QP    W ALL AC IH N+E+G+ +++ + + + E+   +VLLSNIYA    WE  
Sbjct: 359 MPIQPDASAWGALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGKWEGV 418

Query: 665 ---------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYI 715
                    +   K PG S I     V  F  G+ +H     I   L  L  K +  GY+
Sbjct: 419 DDVRSLARDRGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEEIYRELRDLTSKIKTIGYV 478

Query: 716 PDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKII 775
           PD   VL+DV EDEKE  L  HSE+LA+A+ +    P +PIRI KNLR+C DCHT  K I
Sbjct: 479 PDFCFVLQDVEEDEKEHILMGHSERLAIAYGIISTSPKTPIRIFKNLRVCGDCHTVTKFI 538

Query: 776 SKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           S I +REII+RD  RFHHF+ G CSCGD+W
Sbjct: 539 SIITEREIIVRDSSRFHHFKGGTCSCGDYW 568



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 174/378 (46%), Gaps = 25/378 (6%)

Query: 71  DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQ 130
           DL     IHC VLK G   D+F    L+++Y +   + DA KLFD+MP R+  S+   I 
Sbjct: 9   DLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNAMIS 68

Query: 131 GYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDS 190
           GY  +    EA+ +   +  EG +++     + L V   +G       +   V K G + 
Sbjct: 69  GYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEF 128

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFE---------------EALNFFSQMRA 235
             FV  ALI+ ++  G +  A+KVF  L  D                  EA+  +  M  
Sbjct: 129 ELFVSNALINMYAKFGSLGHAQKVFGLLIKDVVSWNTLITGYAQNGLASEAIEVYLLMEE 188

Query: 236 -VGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
                PN  T+  +L A   +  ++     HG  +K C   D++V   L+D+Y K G++ 
Sbjct: 189 HEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLD 248

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
           +A  +F ++P+K+ +PW+ MI+ Y        A+ELF  M+   V P+  TFVS+L AC 
Sbjct: 249 DAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSAC- 307

Query: 355 TMEGLDLGNQ--IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVT 411
           +  GL    Q   + +    G+   +     ++D++ + G +E +     + P + +   
Sbjct: 308 SHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMPIQPDASA 367

Query: 412 WNTM-----IVGYVQLGE 424
           W  +     I G ++LG+
Sbjct: 368 WGALLNACRIHGNIELGK 385



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 126/285 (44%), Gaps = 40/285 (14%)

Query: 60  ATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPE 119
           A+ L  C Q  D+ +   IH  V+K G   +LF +N L+N+Y K   L  A K+F  +  
Sbjct: 99  ASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLI- 157

Query: 120 RNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFT--AFLKVLVSMGWAELCP 177
           ++ +S+ T I GY  +    EA+ ++  L  E  E+ P   T  + L     +G  +   
Sbjct: 158 KDVVSWNTLITGYAQNGLASEAIEVY-LLMEEHEEIIPNQGTWVSILPAYSHVGALQQGM 216

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF-----------------DGLFN 220
            +   V K    S+ FVGT LID +  CG ++ A  +F                  G+  
Sbjct: 217 RIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHG 276

Query: 221 DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM----- 275
           D  E+AL  F +M+A   KP++ TF  +L AC        + S      + C+ M     
Sbjct: 277 DG-EKALELFREMKAERVKPDHITFVSLLSAC--------SHSGLVSDAQWCFNMMEEEY 327

Query: 276 ----DLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMI 315
                L     ++DL+ ++GE+  A    ++MP + D   W  ++
Sbjct: 328 GIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMPIQPDASAWGALL 372


>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1291

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 223/566 (39%), Positives = 315/566 (55%), Gaps = 14/566 (2%)

Query: 254  GLDTIRV---AKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIP 310
            G DTI      K  H        + D  +      +Y     I  A  +FE++P      
Sbjct: 726  GTDTISCFSCLKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFL 785

Query: 311  WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV 370
            W+ MI  +A     + ++EL+ +M +  + P++F F   L++CA +  L  G  IH  +V
Sbjct: 786  WNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLV 845

Query: 371  RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMI 430
              G  +D+FV  AL+D+YAKCG +E +  +F +   R+ V+W +MI GY   G   + + 
Sbjct: 846  CCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLG 905

Query: 431  MFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYA 490
             F  M    V    V+  SVL AC +L AL  G   H   ++  ++ D++VA A++DMY+
Sbjct: 906  FFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYS 965

Query: 491  KCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVG 550
            KCGS+  AR +FD     + V W+AMI+ Y +HG   + + +FD M + G RP+++TF  
Sbjct: 966  KCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTC 1025

Query: 551  VLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQ 610
            VLSACS+ GLLE+G+ YF+ M   + I   + +Y  MV LLGRAG L +A  LIE +P +
Sbjct: 1026 VLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVE 1085

Query: 611  PSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW------- 663
            P   IW +LLGAC IHNN+++    A H+   +P     HVLLSNIYA    W       
Sbjct: 1086 PDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVR 1145

Query: 664  ----EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLS 719
                 + A+K  G S +E    VH F  GD SH     +   LE L    +  GY+P   
Sbjct: 1146 KMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTD 1205

Query: 720  AVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIV 779
             VL D+ E+ KE  L  HSE+LA+AF L    P + +RI KNLRIC DCH AIK+ISKIV
Sbjct: 1206 FVLHDIEEEAKEAALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIV 1265

Query: 780  QREIIIRDVHRFHHFQDGCCSCGDFW 805
             R I++RD+HRFH F+DG CSCGD+W
Sbjct: 1266 NRVILVRDMHRFHRFEDGVCSCGDYW 1291



 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 245/695 (35%), Positives = 361/695 (51%), Gaps = 38/695 (5%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
            Q+C   ++ ++   +H QV K G   D F    L ++Y K   L  A K+FDE P  N 
Sbjct: 11  FQAC---NNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNV 67

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLH-REGHELNPFAFTAFLKVLVSMGWAELCPCVFA 181
             + +T++ Y    Q+ E + LF  +    G   + F     LK    +   EL   +  
Sbjct: 68  HLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHG 127

Query: 182 CVYKLGH-DSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFE 224
              K     S+ FVG+AL++ +S CG +  A KVF+                   N+  E
Sbjct: 128 FAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPE 187

Query: 225 EALNFFSQM---RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
           EAL  FSQM     V   P   T   V+ AC  L  ++     HG  ++  ++ DL +  
Sbjct: 188 EALALFSQMVMMDCVVLDP--VTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVN 245

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           +LL+LY K+G    A  +F +MP+KDVI WS MIA YA  + + +A+ LF  M +    P
Sbjct: 246 SLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEP 305

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           N  T VS LQACA    L+ G +IH + V  G   D  VS AL+D+Y KC   + +V+LF
Sbjct: 306 NSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLF 365

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
              PK++ V+W  ++ GY Q G   K+M +F  ML + +    V    +L A + L   +
Sbjct: 366 QRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQ 425

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
             + +H   V++ ++ +V V  +LI++Y+KCGS+ DA  +F  M   + V W++MI+ Y 
Sbjct: 426 QALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYG 485

Query: 522 MHGLSAEVLKVFDLM-QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPC 580
           +HG   E L++FD M +    RPNN+TF+ +LSACS+ GL+E+G   F  MV +Y + P 
Sbjct: 486 IHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPD 545

Query: 581 IEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHIL 640
            EH+  MV LLGR G L KA  +I  +P      +W ALLGAC IH+N+E+G  +A+++ 
Sbjct: 546 SEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLF 605

Query: 641 DFEPEDEATHVLLSNIYAMARSWEKAAS-----KEPGL------SWIENQGMVHYFRAGD 689
             +P     ++LLSNIYA+   W+  A      KE GL      S +E +G VH F A D
Sbjct: 606 WLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASD 665

Query: 690 TSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRD 724
             H D   I  +L  L  +  K  YIPDL  +L D
Sbjct: 666 RFHPDSQKIYELLRKLEAQMGKEVYIPDLDFLLHD 700



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 166/335 (49%), Gaps = 18/335 (5%)

Query: 100  VYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFA 159
            +YV  NR+  A+ +F+++P   +  +   I+G+    +F+ ++ L+S +  +G + + FA
Sbjct: 761  MYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFA 820

Query: 160  FTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL- 218
            F   LK    +   +    +   +   G  ++ FV  AL+D ++ CG +E AR VFD + 
Sbjct: 821  FPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMA 880

Query: 219  ---------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKS 263
                            N    E L FF  MR+ G  PN  +   VL AC  L  +R  + 
Sbjct: 881  VRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEW 940

Query: 264  AHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDL 323
             H   ++T +E D+ VA A++D+Y+K G +  AR +F+E   KD++ WS MIA Y     
Sbjct: 941  FHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGH 1000

Query: 324  SIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNA 383
               A++LF +M +A V P+  TF  VL AC+    L+ G     L+    +++    + A
Sbjct: 1001 GRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYA 1060

Query: 384  LM-DVYAKCGRMENSVELFAESP-KRNHVTWNTMI 416
             M D+  + G++  +V+L    P + +   W +++
Sbjct: 1061 CMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLL 1095



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 145/306 (47%), Gaps = 12/306 (3%)

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
             V + QAC     +   +Q+HS V + G+L D F +  L  +YAKC  ++ + ++F E+
Sbjct: 6   VLVDLFQACNNGRSV---SQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDET 62

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATE-VTYSSVLRACASLAALEPG 463
           P  N   WN+ +  Y +  +  + + +F  M+     A +  T    L+ACA L  LE G
Sbjct: 63  PHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELG 122

Query: 464 MQVHCLTVKAN-YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
             +H    K +    D+ V +AL+++Y+KCG + +A  VF+     + V W +M++GY  
Sbjct: 123 KVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQ 182

Query: 523 HGLSAEVLKVFDLMQQRGWRP-NNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
           +    E L +F  M        + +T V V+SAC+    ++ G      +V     +  +
Sbjct: 183 NNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSC-VHGLVIRREFDGDL 241

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHIL- 640
               S+++L  + G    AA L   +P +  V+ W  ++ AC  +N      L+  H + 
Sbjct: 242 PLVNSLLNLYAKTGCEKIAANLFSKMP-EKDVISWSTMI-ACYANNEAANEALNLFHEMI 299

Query: 641 --DFEP 644
              FEP
Sbjct: 300 EKRFEP 305



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 132/274 (48%), Gaps = 26/274 (9%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E NS +  ++LQ+C  + +L+    IH   + KG  LD   +  L+++Y+K +   +A  
Sbjct: 304 EPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVD 363

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           LF  +P+++ +S+V  + GY  +    +++G+F  +  +G + +  A    L     +G 
Sbjct: 364 LFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGI 423

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------------- 218
            +   C+   V + G +SN FVG +LI+ +S CG +  A K+F G+              
Sbjct: 424 FQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAA 483

Query: 219 --FNDCFEEALNFFSQM-RAVGFKPNNFTFAFVLKAC--LGL--DTIRV-AKSAHGCALK 270
              +    EAL  F QM +    +PNN TF  +L AC   GL  + +++  +  H   L+
Sbjct: 484 YGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLR 543

Query: 271 TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
              E   +  + ++DL  + G++  A  I   MP
Sbjct: 544 PDSE---HFGI-MVDLLGRIGQLGKAMDIINRMP 573



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 104/458 (22%), Positives = 174/458 (37%), Gaps = 90/458 (19%)

Query: 58   SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
            ++  +L+SC    DLQ    IH  ++  G   DLF    L+++Y K   +  A  +FD+M
Sbjct: 820  AFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKM 879

Query: 118  PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
              R+ +S+ + I GY  +    E +G F  +   G   N  +  + L    ++G      
Sbjct: 880  AVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGE 939

Query: 178  CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND---CF----------- 223
               + V + G + +  V TA++D +S CG ++ AR +FD        C+           
Sbjct: 940  WFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHG 999

Query: 224  --EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT-CYEMDLYVA 280
               +A++ F QM   G +P++ TF  VL AC     +   K       +       L   
Sbjct: 1000 HGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNY 1059

Query: 281  VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
              ++DL  ++G++S A  + E MP                                  V 
Sbjct: 1060 ACMVDLLGRAGQLSEAVDLIENMP----------------------------------VE 1085

Query: 341  PNQFTFVSVLQACATMEGLDLGNQI-----HSLVVRVG---LLSDVFVSNALMDVYAKCG 392
            P+   + S+L AC     LDL  +I     H   V  G   LLS+++ + +  +   K  
Sbjct: 1086 PDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVR 1145

Query: 393  RM-----------------ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKM 435
            +M                 +N V  F     R+H  W  +   Y +L E+   M     +
Sbjct: 1146 KMMARRGANKIQGFSLVEYDNQVHKFGVG-DRSHPQWEKL---YAKLEELAAPMKHLGYV 1201

Query: 436  ---------LEEQVPATEVTYSSVLRACA-SLAALEPG 463
                     +EE+     ++Y S   A A  L    PG
Sbjct: 1202 PLTDFVLHDIEEEAKEAALSYHSERLAIAFGLINTSPG 1239


>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1161

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 224/649 (34%), Positives = 360/649 (55%), Gaps = 35/649 (5%)

Query: 191  NAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMR 234
            N      LID +  C     A KVFD +                 N   + +L+ FS+M 
Sbjct: 411  NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 470

Query: 235  AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
              G  PN FTF+  LKAC  L+ +      HG  LK  +EM + V  +L+D+Y+K G I+
Sbjct: 471  RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRIN 530

Query: 295  NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA--PNQFTFVSVLQA 352
             A ++F  +  + +I W+ MIA +        A++ F  M++A +   P++FT  S+L+A
Sbjct: 531  EAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKA 590

Query: 353  CATMEGLDLGNQIHSLVVRVGL--LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHV 410
            C++   +  G QIH  +VR G    S   ++ +L+D+Y KCG + ++ + F +  ++  +
Sbjct: 591  CSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMI 650

Query: 411  TWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLT 470
            +W+++I+GY Q GE  +AM +F ++ E          SS++   A  A L  G Q+  L 
Sbjct: 651  SWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALA 710

Query: 471  VKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVL 530
            VK    ++  V N+++DMY KCG + +A   F  M   + +SW  +I+GY  HGL  + +
Sbjct: 711  VKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSV 770

Query: 531  KVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSL 590
            ++F  M +    P+ + ++ VLSACS+ G++++GE  F  ++  +GI+P +EHY  +V L
Sbjct: 771  RIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDL 830

Query: 591  LGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATH 650
            LGRAG L +A  LI+ +P +P+V IW+ LL  C +H ++E+G+   + +L  + ++ A +
Sbjct: 831  LGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANY 890

Query: 651  VLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIR 699
            V++SN+Y  A  W            K   KE G+SW+E +  VH+FR+G+ SH    +I+
Sbjct: 891  VMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQ 950

Query: 700  GMLEWLNMKSRKA-GYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFK---MPPSSP 755
              L+    + R+  GY+  L   L D+ ++ KE  L  HSEKLA+  AL           
Sbjct: 951  ETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKT 1010

Query: 756  IRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
            IR+ KNLR+CVDCH  IK +SKI +   ++RD  RFH F+DGCCSCGD+
Sbjct: 1011 IRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1059



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 138/503 (27%), Positives = 243/503 (48%), Gaps = 28/503 (5%)

Query: 89  LDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTL 148
           L+L  +N L+++Y K      A K+FD MPERN +S+   + G+ ++     ++ LFS +
Sbjct: 410 LNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEM 469

Query: 149 HREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCV 208
            R+G   N F F+  LK    +   E    +     K+G +    VG +L+D +S CG +
Sbjct: 470 GRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRI 529

Query: 209 EFARKVFDGLFNDCF----------------EEALNFFSQMRAVGFK--PNNFTFAFVLK 250
             A KVF  + +                    +AL+ F  M+    K  P+ FT   +LK
Sbjct: 530 NEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLK 589

Query: 251 ACLGLDTIRVAKSAHGCALKTCYEMDLYVAV--ALLDLYTKSGEISNARRIFEEMPKKDV 308
           AC     I   K  HG  +++ +       +  +L+DLY K G + +AR+ F+++ +K +
Sbjct: 590 ACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTM 649

Query: 309 IPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSL 368
           I WS +I  YAQ    ++A+ LF R+++     + F   S++   A    L  G Q+ +L
Sbjct: 650 ISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQAL 709

Query: 369 VVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKA 428
            V++    +  V N+++D+Y KCG ++ + + FAE   ++ ++W  +I GY + G   K+
Sbjct: 710 AVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKS 769

Query: 429 MIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA-LID 487
           + +F +ML   +   EV Y +VL AC+    ++ G ++    ++ +     V   A ++D
Sbjct: 770 VRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVD 829

Query: 488 MYAKCGSITDARLVFDMMNDWNEVS-WNAMISGYSMHG---LSAEVLKVFDLMQQRGWRP 543
           +  + G + +A+ + D M     V  W  ++S   +HG   L  EV K+  L++     P
Sbjct: 830 LLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKI--LLRIDAKNP 887

Query: 544 NNLTFVGVLSACSNGGLLEQGEA 566
            N   +  L     G   EQG A
Sbjct: 888 ANYVMMSNLYG-QAGYWNEQGNA 909



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 189/363 (52%), Gaps = 13/363 (3%)

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
            AF ++   G D     +S      +T   ++L  +  L+D+Y K  E   A ++F+ MP
Sbjct: 386 LAFYIRVSFGPDYTDDPES------ETKPWLNLITSNYLIDMYCKCREPLMAYKVFDSMP 439

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
           +++V+ WS +++ +        ++ LF  M +  + PN+FTF + L+AC  +  L+ G Q
Sbjct: 440 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 499

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
           IH   +++G    V V N+L+D+Y+KCGR+  + ++F     R+ ++WN MI G+V  G 
Sbjct: 500 IHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGY 559

Query: 425 VGKAMIMFSKMLEEQVP--ATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD--MDVV 480
             KA+  F  M E  +     E T +S+L+AC+S   +  G Q+H   V++ +       
Sbjct: 560 GSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSAT 619

Query: 481 VANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG 540
           +  +L+D+Y KCG +  AR  FD + +   +SW+++I GY+  G   E + +F  +Q+  
Sbjct: 620 ITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELN 679

Query: 541 WRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA-NYGIEPCIEHYTSMVSLLGRAGHLDK 599
            + ++     ++   ++  LL QG+      V    G+E  +    S+V +  + G +D+
Sbjct: 680 SQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSV--LNSVVDMYLKCGLVDE 737

Query: 600 AAK 602
           A K
Sbjct: 738 AEK 740



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/424 (24%), Positives = 198/424 (46%), Gaps = 32/424 (7%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +++T+L++C   + L+  + IH   LK G  + +   N L+++Y K  R+ +A K+F
Sbjct: 477 NEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVF 536

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNP--FAFTAFLKVLVSMGW 172
             + +R+ IS+   I G+  +    +A+  F  +     +  P  F  T+ LK   S G 
Sbjct: 537 RRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGM 596

Query: 173 AELCPCVFACVYKLGHD--SNAFVGTALIDAFSVCGCVEFARKVFDGLFNDC-------- 222
                 +   + + G    S+A +  +L+D +  CG +  ARK FD +            
Sbjct: 597 IYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLI 656

Query: 223 --------FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
                   F EA+  F +++ +  + ++F  + ++        +R  K     A+K    
Sbjct: 657 LGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSG 716

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
           ++  V  +++D+Y K G +  A + F EM  KDVI W+ +I  Y +  L   +V +F  M
Sbjct: 717 LETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEM 776

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV-GLLSDVFVSNALMDVYAKCGR 393
            +  + P++  +++VL AC+    +  G ++ S ++   G+   V     ++D+  + GR
Sbjct: 777 LRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGR 836

Query: 394 MENSVELFAESP-KRNHVTWNTMIV-----GYVQLG-EVGKAMIMFSKMLEEQVPATEVT 446
           ++ +  L    P K N   W T++      G ++LG EVGK ++     ++ + PA  V 
Sbjct: 837 LKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILL----RIDAKNPANYVM 892

Query: 447 YSSV 450
            S++
Sbjct: 893 MSNL 896


>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
          Length = 1309

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 213/541 (39%), Positives = 316/541 (58%), Gaps = 11/541 (2%)

Query: 276  DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
            +L VA  L+  Y+    + +A  +F+ M  +D + WS M+  +A+    ++    F  + 
Sbjct: 769  NLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELI 828

Query: 336  QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
            +    P+ +T   V++AC  ++ L +G  IH +V + GL  D FV  AL+D+Y KC  +E
Sbjct: 829  RCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIE 888

Query: 396  NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
            ++  LF +  +R+ VTW  MI GY + G   +++++F KM EE V   +V   +V+ ACA
Sbjct: 889  DARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACA 948

Query: 456  SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
             L A+     +     +  + +DV++  A+IDM+AKCG +  AR +FD M + N +SW+A
Sbjct: 949  KLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSA 1008

Query: 516  MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
            MI+ Y  HG   + L +F +M + G  PN +T V +L ACS+ GL+E+G  +F  M  +Y
Sbjct: 1009 MIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDY 1068

Query: 576  GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS 635
             +   ++HYT +V LLGRAG LD+A KLI  +  +    +W A LGAC  H +V +   +
Sbjct: 1069 SVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGACRTHKDVXLAEKA 1128

Query: 636  AQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHY 684
            A  +L+ +P++   ++LLSNIYA A  WE  A            K PG +WIE     H 
Sbjct: 1129 ATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQRRLKKIPGWTWIEVDNKSHQ 1188

Query: 685  FRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALA 744
            F  GDT+H     I  ML+ L  K    GY+PD + VL DV E+ K   L+ HSEKLA+A
Sbjct: 1189 FSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYTHSEKLAIA 1248

Query: 745  FALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
            F L   P  +PIRIIKNLR+C DCHT  K++S I  R II+RD +RFHHF++G CSCGD+
Sbjct: 1249 FGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDY 1308

Query: 805  W 805
            W
Sbjct: 1309 W 1309



 Score =  358 bits (920), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 188/499 (37%), Positives = 284/499 (56%), Gaps = 11/499 (2%)

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
           ++ VA  L+  Y+    + +A  +F+ M  +D + WS M+  +A+    I+    F  + 
Sbjct: 93  NIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELI 152

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
           +    P+ +T   V++AC  ++ L +G  IH +V + GL  D FV  AL+D+Y KC  +E
Sbjct: 153 RCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIE 212

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
           ++  LF +  +R+ VTW  MI GY + G+  +++++F KM EE V   +V   +V+ ACA
Sbjct: 213 DARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACA 272

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
            L A+     +     +  + +DV++  A+IDMYAKCG +  AR +FD M + N +SW+A
Sbjct: 273 KLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSA 332

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           MI+ Y  HG   + L +F +M   G  P+ +T   +L ACS+ GL+E+G  +F SM  +Y
Sbjct: 333 MIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDY 392

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS 635
            +   ++HYT +V LLGRAG LD+A KLI+ +  +    +W A LGAC  H +V +   +
Sbjct: 393 SVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKA 452

Query: 636 AQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHY 684
           A  +L+ + ++   +VLLSNIYA A  WE  A            K PG +WIE     H 
Sbjct: 453 ATSLLELQSQNPGHYVLLSNIYANAGRWEDVAKIRDLMSQRRLKKTPGWTWIEVDNKSHQ 512

Query: 685 FRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALA 744
           F  GDT+H     I  ML+ L+ K    GY+PD + VL DV E+ K   L+ HSEKLA+A
Sbjct: 513 FSVGDTTHPRSKEIYEMLKSLSNKLELVGYVPDTNFVLHDVDEELKIGILYTHSEKLAIA 572

Query: 745 FALFKMPPSSPIRIIKNLR 763
           F L   P  +PIRIIKNLR
Sbjct: 573 FGLIATPEHTPIRIIKNLR 591



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 186/359 (51%), Gaps = 26/359 (7%)

Query: 187 GHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNF----------------- 229
           G   N  V   LI  +S    ++ A  +FDG+   C  +++++                 
Sbjct: 89  GMLENIVVANKLIYFYSYYRALDDAYGLFDGM---CVRDSVSWSVMVGGFAKVGDYINCF 145

Query: 230 --FSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLY 287
             F ++   G +P+N+T  FV++AC  L  +++ +  H    K   ++D +V  AL+D+Y
Sbjct: 146 GTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMY 205

Query: 288 TKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFV 347
            K  EI +AR +F++M ++D++ W+ MI  YA+   + +++ LF +MR+  V P++   V
Sbjct: 206 VKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMV 265

Query: 348 SVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKR 407
           +V+ ACA +  +     I   + R     DV +  A++D+YAKCG +E++ E+F    ++
Sbjct: 266 TVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEK 325

Query: 408 NHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVH 467
           N ++W+ MI  Y   G+  KA+ +F  ML   +   ++T +S+L AC+    +E G++  
Sbjct: 326 NVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFF 385

Query: 468 CLTVKANYDM--DVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
             ++  +Y +  DV     ++D+  + G + +A +L+  M  + +E  W A +     H
Sbjct: 386 S-SMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGACRTH 443



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 184/359 (51%), Gaps = 26/359 (7%)

Query: 187  GHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNF----------------- 229
            G   N  V   L+  +S    ++ A  +FDG+   C  +++++                 
Sbjct: 765  GMLQNLIVANKLVXFYSYYRALDDAYGLFDGM---CVRDSVSWSVMVGGFAKVGDYMNCF 821

Query: 230  --FSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLY 287
              F ++   G +P+N+T  FV++AC  L  +++ +  H    K   ++D +V  AL+D+Y
Sbjct: 822  GTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMY 881

Query: 288  TKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFV 347
             K  EI +AR +F++M ++D++ W+ MI  YA+   + +++ LF +MR+  V P++   V
Sbjct: 882  GKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMV 941

Query: 348  SVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKR 407
            +V+ ACA +  +     I   + R     DV +  A++D++AKCG +E++ E+F    ++
Sbjct: 942  TVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEK 1001

Query: 408  NHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVH 467
            N ++W+ MI  Y   G+  KA+ +F  ML   +   ++T  S+L AC+    +E G++  
Sbjct: 1002 NVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFF 1061

Query: 468  CLTVKANYDM--DVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
               +  +Y +  DV     ++D+  + G + +A +L+  M  + +E  W A +     H
Sbjct: 1062 S-XMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGACRTH 1119



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 169/364 (46%), Gaps = 18/364 (4%)

Query: 71   DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQ 130
            +L     +H Q    G   +L   N L+  Y     L DA  LFD M  R+++S+   + 
Sbjct: 750  NLTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVG 809

Query: 131  GYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDS 190
            G+     ++   G F  L R G   + +     ++    +   ++   +   VYK G D 
Sbjct: 810  GFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDL 869

Query: 191  NAFVGTALIDAFSVCGCVEFARKVFD--------------GLFNDC--FEEALNFFSQMR 234
            + FV  AL+D +  C  +E AR +FD              G + +C    E+L  F +MR
Sbjct: 870  DHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMR 929

Query: 235  AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
              G  P+      V+ AC  L  +  A++      +  +++D+ +  A++D++ K G + 
Sbjct: 930  EEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVE 989

Query: 295  NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
            +AR IF+ M +K+VI WS MIA Y        A++LF  M ++ + PN+ T VS+L AC+
Sbjct: 990  SAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACS 1049

Query: 355  TMEGLDLGNQIHSLVVR-VGLLSDVFVSNALMDVYAKCGRMENSVELFAE-SPKRNHVTW 412
                ++ G +  S +     +  DV     ++D+  + GR++ +++L    + +++   W
Sbjct: 1050 HAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLW 1109

Query: 413  NTMI 416
               +
Sbjct: 1110 GAFL 1113



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 170/367 (46%), Gaps = 20/367 (5%)

Query: 51  VSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDA 110
           +   N   Y ++L +C    +L     +H Q    G   ++   N L+  Y     L DA
Sbjct: 57  LQRLNPKFYISALVNC---RNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDA 113

Query: 111 TKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSM 170
             LFD M  R+++S+   + G+     ++   G F  L R G   + +     ++    +
Sbjct: 114 YGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDL 173

Query: 171 GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-------------- 216
              ++   +   VYK G D + FV  AL+D +  C  +E AR +FD              
Sbjct: 174 KNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMI 233

Query: 217 GLFNDCFE--EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
           G + +C +  E+L  F +MR  G  P+      V+ AC  L  +  A+       +  ++
Sbjct: 234 GGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQ 293

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
           +D+ +  A++D+Y K G + +AR IF+ M +K+VI WS MIA Y        A++LF  M
Sbjct: 294 LDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMM 353

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQ-IHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
             + + P++ T  S+L AC+    ++ G +   S+     + +DV     ++D+  + GR
Sbjct: 354 LSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGR 413

Query: 394 MENSVEL 400
           ++ +++L
Sbjct: 414 LDEALKL 420



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 128/280 (45%), Gaps = 26/280 (9%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           ++++    +++C    +LQ    IH  V K G  LD F    L+++YVK   + DA  LF
Sbjct: 159 DNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLF 218

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D+M ER+ +++   I GY    +  E++ LF  +  EG   +  A    +     +G   
Sbjct: 219 DKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMH 278

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------- 218
               +   + +     +  +GTA+ID ++ CGCVE AR++FD +                
Sbjct: 279 KARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYG 338

Query: 219 FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKAC----LGLDTIRVAKSA-HGCALKTCY 273
           ++    +AL+ F  M + G  P+  T A +L AC    L  + +R   S     +++T  
Sbjct: 339 YHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRT-- 396

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWS 312
             D+     ++DL  ++G +  A ++ + M  +KD   W 
Sbjct: 397 --DVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWG 434



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 16/214 (7%)

Query: 55   NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
            ++++    +++C    +LQ    IH  V K G  LD F    L+++Y K   + DA  LF
Sbjct: 835  DNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLF 894

Query: 115  DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
            D+M ER+ +++   I GY       E++ LF  +  EG   +  A    +     +G   
Sbjct: 895  DKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMH 954

Query: 175  LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------- 218
                +   + +     +  +GTA+ID  + CGCVE AR++FD +                
Sbjct: 955  KARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYG 1014

Query: 219  FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKAC 252
            ++    +AL+ F  M   G  PN  T   +L AC
Sbjct: 1015 YHGQGRKALDLFPMMLRSGILPNKITLVSLLYAC 1048



 Score = 45.1 bits (105), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 50/114 (43%)

Query: 61   TSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPER 120
            T + +C +   +  A TI   + +K   LD+     +++++ K   +  A ++FD M E+
Sbjct: 942  TVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEK 1001

Query: 121  NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
            N IS+   I  Y    Q  +A+ LF  + R G   N     + L      G  E
Sbjct: 1002 NVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVE 1055


>gi|297792601|ref|XP_002864185.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310020|gb|EFH40444.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 588

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 211/552 (38%), Positives = 327/552 (59%), Gaps = 12/552 (2%)

Query: 265 HGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLS 324
           HG  +K+   +   VA  L++ Y+KS    ++RR FE+ P+K    WS +I+ +AQ +L 
Sbjct: 38  HGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSATTWSSIISCFAQNELP 97

Query: 325 IDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNAL 384
             ++E   +M    + P+     S  ++C  +   D+G  +H L ++ G  +DVFV ++L
Sbjct: 98  WMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVHCLSMKTGYDADVFVGSSL 157

Query: 385 MDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATE 444
           +D+YAKCG +  + ++F E P RN VTW+ M+ GY Q+GE  +A+ +F + L E +   +
Sbjct: 158 VDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVND 217

Query: 445 VTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDM 504
            ++S+V+  CA+   LE G Q+  L +K+++D    V ++L+ +Y+KCG +  A  VFD 
Sbjct: 218 YSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDLEGAYQVFDE 277

Query: 505 MNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG 564
           +   N   WNAM+   + H  + +V+++F  M+  G +PN +TF+ VL+ACS+ GL+++G
Sbjct: 278 VPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEG 337

Query: 565 EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACI 624
           + YF  M  +  IEP  +HY S+V +LGRAG L++A +++  +P  P+  +W ALL +C 
Sbjct: 338 KYYFDLMKESR-IEPTDKHYASLVDMLGRAGKLEEALEIVTNMPIDPTESVWGALLTSCT 396

Query: 625 IHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGL 673
           IH N E+   +A  + +  P     H+ LSN YA    +E AA            KE GL
Sbjct: 397 IHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGL 456

Query: 674 SWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERY 733
           SW+E +  VH F AG+  H     I   L  L  +  KAGY+ D S VLR+V  DEK + 
Sbjct: 457 SWVEERNKVHTFAAGERRHERSKEIYEKLAELGEEMEKAGYVADTSYVLREVDGDEKNQT 516

Query: 734 LWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHH 793
           +  HSE+LA+AF L   P   PIR++KNLR+C DCH AIK +S   +R II+RD +RFH 
Sbjct: 517 IRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSICTRRVIIVRDNNRFHR 576

Query: 794 FQDGCCSCGDFW 805
           F+DG CSC D+W
Sbjct: 577 FEDGKCSCNDYW 588



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 91/299 (30%), Positives = 159/299 (53%), Gaps = 1/299 (0%)

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           +L F  +M A   +P++       K+C  L    + KS H  ++KT Y+ D++V  +L+D
Sbjct: 100 SLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVHCLSMKTGYDADVFVGSSLVD 159

Query: 286 LYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFT 345
           +Y K GEI  AR++F+EMP ++V+ WS M+  YAQ   + +A+ LF       +A N ++
Sbjct: 160 MYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYS 219

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           F +V+  CA    L+LG QI  L ++    S  FV ++L+ +Y+KCG +E + ++F E P
Sbjct: 220 FSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDLEGAYQVFDEVP 279

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
            RN   WN M+    Q     K + +F +M    +    +T+ +VL AC+    ++ G  
Sbjct: 280 MRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGKY 339

Query: 466 VHCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
              L  ++  +       +L+DM  + G + +A  +V +M  D  E  W A+++  ++H
Sbjct: 340 YFDLMKESRIEPTDKHYASLVDMLGRAGKLEEALEIVTNMPIDPTESVWGALLTSCTIH 398



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 152/296 (51%), Gaps = 4/296 (1%)

Query: 337 AFVAP--NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
           AF  P  N      +L + A    +  G Q+H  +V+ GL     V+N L++ Y+K    
Sbjct: 7   AFFVPCHNYNQICDLLLSSARSRSIVKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLP 66

Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
            +S   F +SP+++  TW+++I  + Q      ++    KM+   +   +    S  ++C
Sbjct: 67  FDSRRAFEDSPQKSATTWSSIISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSC 126

Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
             L+  + G  VHCL++K  YD DV V ++L+DMYAKCG I  AR +FD M   N V+W+
Sbjct: 127 GILSRCDIGKSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWS 186

Query: 515 AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
            M+ GY+  G + E L +F          N+ +F  V+S C+N  LLE G    + +   
Sbjct: 187 GMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSTVISVCANSTLLELGRQ-IQGLCIK 245

Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
              +      +S+VSL  + G L+ A ++ + +P + ++ IW A+L AC  H++ +
Sbjct: 246 SSFDSSSFVGSSLVSLYSKCGDLEGAYQVFDEVPMR-NLGIWNAMLKACAQHSHTQ 300



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/366 (24%), Positives = 180/366 (49%), Gaps = 30/366 (8%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLP-DATKLFDEMPERN 121
           L S  ++  +   + +H  ++K G  L     N L+N Y K ++LP D+ + F++ P+++
Sbjct: 22  LLSSARSRSIVKGLQLHGYIVKSGLSLIPLVANNLINFYSK-SQLPFDSRRAFEDSPQKS 80

Query: 122 TISFVTTIQGYT------VSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAEL 175
             ++ + I  +       +S +F+  + +  +L  + H L P A     K    +   ++
Sbjct: 81  ATTWSSIISCFAQNELPWMSLEFLRKM-MAGSLRPDDHVL-PSA----TKSCGILSRCDI 134

Query: 176 CPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-----------GLFNDCF- 223
              V     K G+D++ FVG++L+D ++ CG + +ARK+FD           G+      
Sbjct: 135 GKSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQ 194

Query: 224 ----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
               EEAL  F +        N+++F+ V+  C     + + +   G  +K+ ++   +V
Sbjct: 195 MGENEEALWLFKEALFENLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFV 254

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
             +L+ LY+K G++  A ++F+E+P +++  W+ M+   AQ   +   +ELF RM+ + +
Sbjct: 255 GSSLVSLYSKCGDLEGAYQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGM 314

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
            PN  TF++VL AC+    +D G     L+    +        +L+D+  + G++E ++E
Sbjct: 315 KPNFITFLNVLNACSHAGLVDEGKYYFDLMKESRIEPTDKHYASLVDMLGRAGKLEEALE 374

Query: 400 LFAESP 405
           +    P
Sbjct: 375 IVTNMP 380



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 123/266 (46%), Gaps = 16/266 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           + H   ++ +SC          ++HC  +K G   D+F  + L+++Y K   +  A K+F
Sbjct: 115 DDHVLPSATKSCGILSRCDIGKSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMF 174

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           DEMP RN +++   + GY    +  EA+ LF     E   +N ++F+  + V  +    E
Sbjct: 175 DEMPLRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSTVISVCANSTLLE 234

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-------GLFNDCF---- 223
           L   +     K   DS++FVG++L+  +S CG +E A +VFD       G++N       
Sbjct: 235 LGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDLEGAYQVFDEVPMRNLGIWNAMLKACA 294

Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                ++ +  F +M+  G KPN  TF  VL AC     +   K       ++  E    
Sbjct: 295 QHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGKYYFDLMKESRIEPTDK 354

Query: 279 VAVALLDLYTKSGEISNARRIFEEMP 304
              +L+D+  ++G++  A  I   MP
Sbjct: 355 HYASLVDMLGRAGKLEEALEIVTNMP 380


>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
          Length = 672

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 236/615 (38%), Positives = 349/615 (56%), Gaps = 52/615 (8%)

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           AL  +  M ++G  PN FTF F+LK+C    T +  +  HG  LK  +++DLYV  +L+ 
Sbjct: 59  ALKLYVVMISLGLLPNFFTFPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLIS 118

Query: 286 LYTKSGEISNARRIFE-------------------------------EMPKKDVIPWSFM 314
           +Y ++G + +A+++F+                               E+P KDV+ W+ M
Sbjct: 119 MYAQNGRLEDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAM 178

Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL 374
           I+ YA+T     A+ELF  M +  V P++ T  +V+ ACA    ++LG Q+HS +   G 
Sbjct: 179 ISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGF 238

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
            S++ + NAL+D+Y+KCG +E + EL      ++ ++WNT+I GY  +    +A+++F +
Sbjct: 239 GSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQE 298

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA------LIDM 488
           ML       +VT  S+L ACA L A++ G  +H    K      VVV NA      LIDM
Sbjct: 299 MLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKL--KGVVVTNASSLRTSLIDM 356

Query: 489 YAKCGSITDARLVFDMMNDWNEVS-WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLT 547
           YAKCG I  A  V D       +S WNAMI G++MHG +     +F  M++ G  P+++T
Sbjct: 357 YAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDIT 416

Query: 548 FVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGI 607
           FVG+LSACS+ G+L+ G   F+SM  +Y I P +EHY  M+ LLG +G   +A ++I  +
Sbjct: 417 FVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTM 476

Query: 608 PFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKA- 666
           P +P  +IW +LL AC IH N+E+G   A+ ++  EPE+  ++VLLSNIYA A  W +  
Sbjct: 477 PMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVX 536

Query: 667 -----------ASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYI 715
                        K PG S IE   +VH F  GD  H     I GMLE + +   +AG++
Sbjct: 537 KIRTLLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGMLEEMEVLLEEAGFV 596

Query: 716 PDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKII 775
           PD S VL+++ E+ KE  L  HSEKLA+AF L    P + + I+KNLR+C +CH A K+I
Sbjct: 597 PDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLI 656

Query: 776 SKIVQREIIIRDVHR 790
           SKI +REII RD  R
Sbjct: 657 SKIYKREIIARDRTR 671



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/387 (27%), Positives = 191/387 (49%), Gaps = 36/387 (9%)

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACAT 355
           A  +FE +P+ + + W+ M   +A +   + A++L+  M    + PN FTF  +L++CA 
Sbjct: 28  AISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAK 87

Query: 356 MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES----------- 404
            +    G QIH  V+++G   D++V  +L+ +YA+ GR+E++ ++F  S           
Sbjct: 88  SKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTAL 147

Query: 405 --------------------PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATE 444
                               P ++ V+WN MI GY + G   KA+ +F +M++  V   E
Sbjct: 148 ITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDE 207

Query: 445 VTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDM 504
            T ++V+ ACA   ++E G QVH       +  ++ + NALID+Y+KCG +  A  + + 
Sbjct: 208 STMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEG 267

Query: 505 MNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG 564
           +++ + +SWN +I GY+   L  E L +F  M + G  PN++T + +L AC++ G ++ G
Sbjct: 268 LSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 327

Query: 565 E---AYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLG 621
                Y    +    +       TS++ +  + G +D A ++ +   F  S+  W A++ 
Sbjct: 328 RWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIF 387

Query: 622 ACIIHN--NVEIGRLSAQHILDFEPED 646
              +H   N      S       EP+D
Sbjct: 388 GFAMHGRANAAFDIFSRMRKNGIEPDD 414



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 113/448 (25%), Positives = 194/448 (43%), Gaps = 64/448 (14%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDA------------ 110
           L+SC ++   +    IH  VLK G  LDL+    L+++Y +  RL DA            
Sbjct: 82  LKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDV 141

Query: 111 -------------------TKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHRE 151
                               K+FDE+P ++ +S+   I GY  +  + +A+ LF  + + 
Sbjct: 142 VSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKT 201

Query: 152 GHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFA 211
             + +       +      G  EL   V + +   G  SN  +  ALID +S CG VE A
Sbjct: 202 NVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETA 261

Query: 212 RKVFDGLFN----------------DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGL 255
            ++ +GL N                + ++EAL  F +M   G  PN+ T   +L AC  L
Sbjct: 262 CELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHL 321

Query: 256 DTIRVAKSAHGCALKTCYEMDLYVA----VALLDLYTKSGEISNARRIFEEMP-KKDVIP 310
             I + +  H    K    + +  A     +L+D+Y K G+I  A ++ +     + +  
Sbjct: 322 GAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLST 381

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI-HSLV 369
           W+ MI  +A    +  A ++F RMR+  + P+  TFV +L AC+    LDLG  I  S+ 
Sbjct: 382 WNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMR 441

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTM-----IVGYVQLG 423
               +   +     ++D+    G  + + E+    P + + V W ++     I G ++LG
Sbjct: 442 QDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELG 501

Query: 424 E-VGKAMIMFSKMLEEQVPATEVTYSSV 450
           E   K +I     +E + P + V  S++
Sbjct: 502 ESFAKKLI----KIEPENPGSYVLLSNI 525


>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 1011

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 231/642 (35%), Positives = 348/642 (54%), Gaps = 62/642 (9%)

Query: 224  EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
            E   N F +M+A G  PN +T + VLK C   + +++ K  H   L+   ++D+ +  ++
Sbjct: 372  EMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSI 431

Query: 284  LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP-- 341
            LDLY K      A R+FE M + DV+ W+ MI  Y +      ++++F R+    V    
Sbjct: 432  LDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWN 491

Query: 342  -----------------------------NQFTFVSVLQACATMEGLDLGNQIHSLVVRV 372
                                         +  TF   L   +++  ++LG Q+H +V++ 
Sbjct: 492  TIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKF 551

Query: 373  GLLSDVFVSNALMDVYAKCGRMENSVELFAE----------------SPKRNHVTWNTMI 416
            G  SD F+ ++L+++Y KCGRM+ +  +  +                 PK   V+W +M+
Sbjct: 552  GFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMV 611

Query: 417  VGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD 476
             GYV  G+    +  F  M+ E V     T ++++ ACA+   LE G  VH    K  + 
Sbjct: 612  SGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHR 671

Query: 477  MDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLM 536
            +D  V ++LIDMY+K GS+ DA +VF   N+ N V W +MISGY++HG     + +F+ M
Sbjct: 672  IDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEM 731

Query: 537  QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGH 596
              +G  PN +TF+GVL+ACS+ GL+E+G  YF+ M   Y I P +EH TSMV L GRAGH
Sbjct: 732  LNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGH 791

Query: 597  LDKAAKLI--EGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLS 654
            L K    I   GI    SV  W++ L +C +H NVE+G+  ++ +L   P D   +VLLS
Sbjct: 792  LTKTKNFIFKNGISHLTSV--WKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLS 849

Query: 655  NIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLE 703
            N+ A    W++AA            K+PG SWI+ +  +H F  GD SH   + I   L+
Sbjct: 850  NMCASNHRWDEAARVRSLMHQRGVKKQPGQSWIQLKDQIHTFVMGDRSHPQDDEIYSYLD 909

Query: 704  WLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLR 763
             L  + ++ GY  D+  V++DV E++ E  +  HSEKLA+ F +      +PIRIIKNLR
Sbjct: 910  ILIGRLKEIGYSFDVKLVMQDVEEEQGEVLISHHSEKLAVVFGIINTANRTPIRIIKNLR 969

Query: 764  ICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            IC DCH  IK  S+++ REII+RD+HRFHHF+ G CSCGD+W
Sbjct: 970  ICTDCHNFIKYASQLLDREIIVRDIHRFHHFKHGSCSCGDYW 1011



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 204/413 (49%), Gaps = 53/413 (12%)

Query: 265 HGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLS 324
           H   +K      L  A  LL LY KS  +++A+++F+E+P+++   W+ +I+ +A+   S
Sbjct: 312 HALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGSS 371

Query: 325 IDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNAL 384
                LF  M+     PNQ+T  SVL+ C+    L LG  +H+ ++R G+  DV + N++
Sbjct: 372 EMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSI 431

Query: 385 MDVYAKC-------------------------------GRMENSVELFAESPKRNHVTWN 413
           +D+Y KC                               G +E S+++F   P ++ V+WN
Sbjct: 432 LDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWN 491

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
           T++ G +Q G    A+     M+E     + VT+S  L   +SL+ +E G Q+H + +K 
Sbjct: 492 TIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKF 551

Query: 474 NYDMDVVVANALIDMYAKCGSITDARLV-----FDMMNDWNE-----------VSWNAMI 517
            +D D  + ++L++MY KCG +  A ++      D++   N            VSW +M+
Sbjct: 552 GFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMV 611

Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
           SGY  +G   + LK F LM +     +  T   ++SAC+N G+LE G  +  + V   G 
Sbjct: 612 SGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGR-HVHAYVQKIGH 670

Query: 578 EPCIEHY--TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
              I+ Y  +S++ +  ++G LD A  +      +P++++W +++    +H  
Sbjct: 671 R--IDAYVGSSLIDMYSKSGSLDDAWMVFRQ-SNEPNIVMWTSMISGYALHGQ 720



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 125/515 (24%), Positives = 229/515 (44%), Gaps = 71/515 (13%)

Query: 77  TIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSS 136
           T+H   +K G+   L   N LL +Y K N +  A KLFDE+P+RNT ++   I G+  + 
Sbjct: 310 TLHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAG 369

Query: 137 QFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGT 196
                  LF  +  +G   N +  ++ LK        +L   V A + + G D +  +G 
Sbjct: 370 SSEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGN 429

Query: 197 ALIDAFSVCGCVEFARKVF----------------------------------------- 215
           +++D +  C   E+A ++F                                         
Sbjct: 430 SILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVS 489

Query: 216 -----DGLFNDCFEE-ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCAL 269
                DGL    +E  AL     M   G + +  TF+  L     L  + + +  HG  L
Sbjct: 490 WNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVL 549

Query: 270 KTCYEMDLYVAVALLDLYTKSGEI-----------------SNARRIFEEMPKKDVIPWS 312
           K  ++ D ++  +L+++Y K G +                  NAR  ++E PK  ++ W 
Sbjct: 550 KFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKE-PKAGIVSWG 608

Query: 313 FMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV 372
            M++ Y       D ++ F  M +  V  +  T  +++ ACA    L+ G  +H+ V ++
Sbjct: 609 SMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKI 668

Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMF 432
           G   D +V ++L+D+Y+K G ++++  +F +S + N V W +MI GY   G+   A+ +F
Sbjct: 669 GHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLF 728

Query: 433 SKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYA 490
            +ML + +   EVT+  VL AC+    +E G + +   +K  Y ++  V +  +++D+Y 
Sbjct: 729 EEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCR-YFRMMKDAYCINPGVEHCTSMVDLYG 787

Query: 491 KCGSITDARLVFDMMNDWNEVS--WNAMISGYSMH 523
           + G +T  +  F   N  + ++  W + +S   +H
Sbjct: 788 RAGHLTKTK-NFIFKNGISHLTSVWKSFLSSCRLH 821



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 98/475 (20%), Positives = 193/475 (40%), Gaps = 82/475 (17%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N ++ ++ L+ C  +++LQ    +H  +L+ G  +D+   N +L++Y+K      A +LF
Sbjct: 389 NQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLF 448

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHRE----------------------- 151
           + M E + +S+   I  Y  +    +++ +F  L  +                       
Sbjct: 449 ELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALE 508

Query: 152 --------GHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFS 203
                   G E +   F+  L +  S+   EL   +   V K G DS+ F+ ++L++ + 
Sbjct: 509 QLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYC 568

Query: 204 VC--------------------------------GCVEFARKVFDGLFNDCFEEALNFFS 231
            C                                G V +   V   ++N  +E+ L  F 
Sbjct: 569 KCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFR 628

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
            M       +  T   ++ AC     +   +  H    K  + +D YV  +L+D+Y+KSG
Sbjct: 629 LMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSG 688

Query: 292 EISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQ 351
            + +A  +F +  + +++ W+ MI+ YA     + A+ LF  M    + PN+ TF+ VL 
Sbjct: 689 SLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLN 748

Query: 352 ACATMEGLDLGNQIHSLVVRVGLLSDVFVSN-------ALMDVYAKCGRMENSVE-LFAE 403
           AC+    ++ G +         ++ D +  N       +++D+Y + G +  +   +F  
Sbjct: 749 ACSHAGLIEEGCRYFR------MMKDAYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKN 802

Query: 404 SPKRNHVTWNTMIVG--YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
                   W + +      +  E+GK +   S+ML +  P+    Y  +   CAS
Sbjct: 803 GISHLTSVWKSFLSSCRLHKNVEMGKWV---SEMLLQVAPSDPGAYVLLSNMCAS 854



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 32/276 (11%)

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
           +H+L V+ G L  +  +N L+ +YAK   M ++ +LF E P+RN  TW  +I G+ + G 
Sbjct: 311 LHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGS 370

Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA 484
                 +F +M  +     + T SSVL+ C+    L+ G  VH   ++   D+DVV+ N+
Sbjct: 371 SEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNS 430

Query: 485 LIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVF----------- 533
           ++D+Y KC     A  +F++MN+ + VSWN MI  Y   G   + L +F           
Sbjct: 431 ILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSW 490

Query: 534 ----DLMQQRGWRPNNL----------------TFVGVLSACSNGGLLEQGEAYFKSMVA 573
               D + Q G+  + L                TF   L   S+   +E G      MV 
Sbjct: 491 NTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQ-LHGMVL 549

Query: 574 NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF 609
            +G +      +S+V +  + G +DKA+ ++  +P 
Sbjct: 550 KFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPL 585



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/285 (22%), Positives = 118/285 (41%), Gaps = 45/285 (15%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           +EF++ +++ +L        ++    +H  VLK G   D F  + L+ +Y K  R+  A+
Sbjct: 518 TEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKAS 577

Query: 112 KLFDEMP----------------ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHEL 155
            +  ++P                +   +S+ + + GY  + ++ + +  F  + RE   +
Sbjct: 578 IILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVV 637

Query: 156 NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF 215
           +    T  +    + G  E    V A V K+GH  +A+VG++LID +S  G ++ A  VF
Sbjct: 638 DIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVF 697

Query: 216 DG----------------LFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL------ 253
                               +     A+  F +M   G  PN  TF  VL AC       
Sbjct: 698 RQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIE 757

Query: 254 -GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR 297
            G    R+ K A+      C    +    +++DLY ++G ++  +
Sbjct: 758 EGCRYFRMMKDAY------CINPGVEHCTSMVDLYGRAGHLTKTK 796



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 2/169 (1%)

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
           P   +H L VK      +  AN L+ +YAK  ++  A+ +FD +   N  +W  +ISG++
Sbjct: 307 PLGTLHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFA 366

Query: 522 MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
             G S  V  +F  MQ +G  PN  T   VL  CS    L+ G+     M+ N GI+  +
Sbjct: 367 RAGSSEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRN-GIDVDV 425

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
               S++ L  +    + A +L E +  +  V+ W  ++GA +   +VE
Sbjct: 426 VLGNSILDLYLKCKVFEYAERLFE-LMNEGDVVSWNIMIGAYLRAGDVE 473


>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
 gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
 gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
          Length = 664

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 244/660 (36%), Positives = 345/660 (52%), Gaps = 87/660 (13%)

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           LNF   +R V F P+       LK+C     +R+A++ H  A       D +VA +LL  
Sbjct: 11  LNF---LRHVSFPPDPRLLPSALKSC---SALRLARALHAAAAVAGVSRDAFVASSLLHA 64

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y + G  ++AR + + MP + V+ WS +IA +A    +  A  L  RMR   V PN  T+
Sbjct: 65  YLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSDGVEPNVITW 124

Query: 347 VSV-----------------------------------LQACATMEGLDLGNQIHSLVVR 371
             +                                   L A   +  + +G Q+H  VV+
Sbjct: 125 NGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVK 184

Query: 372 VGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-------------------------- 405
            G   D  V+ AL+D+Y KCGR +  V +F ES                           
Sbjct: 185 AGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRL 244

Query: 406 ---------KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
                    + N V+W +++   VQ G   +A+ +F +M  E +    VT   VL A A+
Sbjct: 245 FREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFAN 304

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           +AAL  G   HC +++  +  D+ V +AL+DMYAKCG + DAR++F+ M   N VSWNAM
Sbjct: 305 IAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAM 364

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           I GY+MHG +   +++F  MQ    +P+ +TF  VL ACS  G  E+G +YF  M   +G
Sbjct: 365 IGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHG 424

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
           I P +EHY  MV+LLGRAG LD A  +I  +PF+P   IW +LLG+C +H NV +  ++A
Sbjct: 425 ISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCRVHGNVVLAEVAA 484

Query: 637 QHILDFEPEDEATHVLLSNIYAMARSWEK-----------AASKEPGLSWIENQGMVHYF 685
           +++   EPE+   +VLLSNIYA  + W+               KE G SWIE +  VH  
Sbjct: 485 ENLFQLEPENAGNYVLLSNIYASKKMWDGVNRLRDMMKTVGLKKEKGCSWIEIKNKVHML 544

Query: 686 RAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAF 745
            AGD+SH  M  I   L+ L M+ R+ G+ P    VL DV E EK+  L VHSEKLA+A 
Sbjct: 545 LAGDSSHPMMAAITEKLKHLTMEMRRLGFAPSTDYVLHDVEEQEKDDILSVHSEKLAVAL 604

Query: 746 ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            L      +P+++IKNLRIC DCH A+K IS   +REI +RD +RFHHF+DG CSC D+W
Sbjct: 605 GLISTSHGTPLQVIKNLRICGDCHEAMKFISSFERREIYVRDTNRFHHFKDGKCSCADYW 664



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 164/365 (44%), Gaps = 63/365 (17%)

Query: 71  DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQ 130
           D+     +H  V+K G  LD      L+++Y K  R  +  ++FDE    +  S    + 
Sbjct: 171 DVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVA 230

Query: 131 GYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDS 190
           G + ++Q  EA+ LF      G ELN  ++T+                + AC        
Sbjct: 231 GLSRNAQVSEALRLFREFVGRGIELNVVSWTS----------------IVAC-------- 266

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLK 250
                           CV+  R +          EA++ F +M++ G +PN+ T   VL 
Sbjct: 267 ----------------CVQNGRDL----------EAVDLFREMQSEGIEPNSVTIPCVLP 300

Query: 251 ACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIP 310
           A   +  +   +SAH  +L+  +  D+YV  AL+D+Y K G + +AR IFE MP ++V+ 
Sbjct: 301 AFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVS 360

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA----TMEGLDLGNQIH 366
           W+ MI  YA    + +AV LF  M+ +   P+  TF  VL AC+    T EG    N++ 
Sbjct: 361 WNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQ 420

Query: 367 SLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTM-----IVGYV 420
               + G+   +     ++ +  + G+++++ ++  + P + +   W ++     + G V
Sbjct: 421 H---KHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCRVHGNV 477

Query: 421 QLGEV 425
            L EV
Sbjct: 478 VLAEV 482


>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
          Length = 779

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 254/745 (34%), Positives = 396/745 (53%), Gaps = 42/745 (5%)

Query: 98  LNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNP 157
           L  ++   +L  A ++FD +P  +  ++   I+ Y+    F  A+ L+ ++       N 
Sbjct: 40  LEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNK 99

Query: 158 FAFTAFLKVLVSMGWAELCP--CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF 215
           + F   LK   ++  A+LC    + A    +G  ++ FV TALID +  C     A  VF
Sbjct: 100 YTFPFVLKACSAL--ADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVF 157

Query: 216 --------------------DGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGL 255
                                G+++      L+   Q R  G +PN  T   +L      
Sbjct: 158 AKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDM--QDRG-GLRPNASTLVSLLPLLAQH 214

Query: 256 DTIRVAKSAHGCALKTCY---EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWS 312
             +    S H   L+      E  + +  ALLD+Y K   +  A R+F  M  ++ + WS
Sbjct: 215 GALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWS 274

Query: 313 FMIARYAQTDLSIDAVELFCRMR-QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR 371
            +I  +   D   +A  LF  M  +     +  +  S L+ CA++  L +G Q+H+L+ +
Sbjct: 275 ALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAK 334

Query: 372 VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIM 431
            G+ +D+   N+L+ +YAK G +  +  LF E   ++ +++  ++ GYVQ G+  +A ++
Sbjct: 335 SGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLV 394

Query: 432 FSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAK 491
           F KM    V     T  S++ AC+ LAAL+ G   H   +     ++  + N+LIDMYAK
Sbjct: 395 FKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAK 454

Query: 492 CGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGV 551
           CG I  +R VFD M   + VSWN MI+GY +HGL  E   +F  M+ +G+ P+++TF+ +
Sbjct: 455 CGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICL 514

Query: 552 LSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQP 611
           ++ACS+ GL+ +G+ +F +M   YGI P +EHY  MV LL R G LD+A + I+ +P + 
Sbjct: 515 IAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKA 574

Query: 612 SVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA---- 667
            V +W ALLGAC IH N+++G+  ++ I    PE     VLLSNI++ A  +++AA    
Sbjct: 575 DVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRI 634

Query: 668 -------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSA 720
                   K PG SWIE  G +H F  GD SH     I   L+ + +  +K GY  D S 
Sbjct: 635 IQKVKGFKKSPGCSWIEINGSLHAFVGGDQSHPCSPDIYHELDNILIDIKKLGYQADTSF 694

Query: 721 VLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQ 780
           VL+D+ E+EKE+ L  HSEKLA+AF +  +     I + KNLR+C DCHTAIK ++ +  
Sbjct: 695 VLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRN 754

Query: 781 REIIIRDVHRFHHFQDGCCSCGDFW 805
           R II+RD +RFHHF++G CSCGDFW
Sbjct: 755 RTIIVRDANRFHHFKNGQCSCGDFW 779



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 132/492 (26%), Positives = 223/492 (45%), Gaps = 23/492 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N +++   L++C    DL    TIH      G   DLF +  L+++Y++  R   A  +F
Sbjct: 98  NKYTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVF 157

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVG-LFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
            +MP R+ +++   + GY     +  A+  L     R G   N     + L +L   G  
Sbjct: 158 AKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGAL 217

Query: 174 ELCPCVFACVYKLGHDSN---AFVGTALIDAFSVCGCVEFARKVFDGL------------ 218
                V A   +   D N     +GTAL+D ++ C  + +A +VF G+            
Sbjct: 218 FQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALI 277

Query: 219 ----FNDCFEEALNFFSQMRAVGFKPNNFT-FAFVLKACLGLDTIRVAKSAHGCALKTCY 273
                 D   EA N F  M   G    + T  A  L+ C  L  +R+    H    K+  
Sbjct: 278 GGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGI 337

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
             DL    +LL +Y K+G I+ A  +F+E+  KD I +  +++ Y Q   + +A  +F +
Sbjct: 338 HADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKK 397

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           M+   V P+  T VS++ AC+ +  L  G   H  V+  GL  +  + N+L+D+YAKCGR
Sbjct: 398 MQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGR 457

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           ++ S ++F + P R+ V+WNTMI GY   G   +A  +F  M  +     +VT+  ++ A
Sbjct: 458 IDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAA 517

Query: 454 CASLAALEPGMQ-VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS 512
           C+    +  G      +T K      +     ++D+ A+ G + +A      M    +V 
Sbjct: 518 CSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVR 577

Query: 513 -WNAMISGYSMH 523
            W A++    +H
Sbjct: 578 VWGALLGACRIH 589


>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
          Length = 1133

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 226/626 (36%), Positives = 344/626 (54%), Gaps = 47/626 (7%)

Query: 227  LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
            L  F ++   G   ++  ++  LK C  +  I +    HGC +K  +++D+Y+  AL++ 
Sbjct: 508  LEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNF 567

Query: 287  YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
            Y +   +  A ++F EMP  + + W+  I    Q++     VELF +M+ +F+     T 
Sbjct: 568  YGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATI 627

Query: 347  VSVLQACATMEG-LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC-------------- 391
            V VLQA  +  G L++G + H  V+R G   DV+V  +L+D+Y K               
Sbjct: 628  VRVLQASISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMK 687

Query: 392  -----------------GRMENSVELF----AESPKRNHVTWNTMIVGYVQLGEVGKAMI 430
                             G  E+++ L      E  K + VTWN MI GY   G   +A+ 
Sbjct: 688  NRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALA 747

Query: 431  MFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYA 490
             F++M +E V     + + +LRACASL+ L+ G ++HCL+++  +  DV VA ALIDMY+
Sbjct: 748  FFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYS 807

Query: 491  KCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVG 550
            K  S+ +A  VF  + +    SWN MI G+++ GL  E + VF+ MQ+ G  P+ +TF  
Sbjct: 808  KSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTA 867

Query: 551  VLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQ 610
            +LSAC N GL+ +G  YF SM+ +Y I P +EHY  MV LLGRAG+LD+A  LI  +P +
Sbjct: 868  LLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLK 927

Query: 611  PSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEK----- 665
            P   IW ALLG+C IH N++    +A+++   EP + A ++L+ N+Y++   WE      
Sbjct: 928  PDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLR 987

Query: 666  ------AASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLS 719
                          SWI+    VH F + +  H D   I   L  L  + +K GY+PD++
Sbjct: 988  ELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVN 1047

Query: 720  AVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIV 779
             V +++ E EK++ L  H+EKLA+ + L KM    PIR+IKN RIC DCH+A K IS + 
Sbjct: 1048 CVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVK 1107

Query: 780  QREIIIRDVHRFHHFQDGCCSCGDFW 805
             RE+ +RD  RFHHF++G CSC DFW
Sbjct: 1108 ARELFLRDGVRFHHFREGKCSCNDFW 1133



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 123/535 (22%), Positives = 242/535 (45%), Gaps = 64/535 (11%)

Query: 50  SVSEFNSHSYATSLQSCIQNDDLQT--AMTIHCQVLK---KGNCLDLFATNVLLNVYVKL 104
           SV  F       S    ++  D Q      +H Q++K   K N  D  A N L++ Y+  
Sbjct: 412 SVPRFRRRGAPRSDADVVEGTDEQEHGIKMMHAQMIKLPQKWNP-DAAAKN-LISSYLGF 469

Query: 105 NRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAV-GLFSTLHREGHELNPFAFTAF 163
                A  +F     RN + + + ++ +  S+  +  V  +F  LH +G   +   ++  
Sbjct: 470 GDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVA 529

Query: 164 LKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN--- 220
           LK    +    L   +  C+ K G D + ++  AL++ +  C  +E A +VF  + N   
Sbjct: 530 LKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEA 589

Query: 221 -------------DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLG-LDTIRVAKSAHG 266
                        +  ++ +  F +M+    K    T   VL+A +  L  + + K  HG
Sbjct: 590 LLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQASISELGFLNMGKETHG 649

Query: 267 CALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP---------------------- 304
             L+  ++ D+YV  +L+D+Y K+  +++A+ +F+ M                       
Sbjct: 650 YVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFED 709

Query: 305 -------------KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQ 351
                        K D++ W+ MI+ YA      +A+  F +M+Q  V PN  +   +L+
Sbjct: 710 ALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAFFAQMQQEGVMPNSASITCLLR 769

Query: 352 ACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
           ACA++  L  G +IH L +R G + DVFV+ AL+D+Y+K   ++N+ ++F     +   +
Sbjct: 770 ACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLAS 829

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
           WN MI+G+   G   +A+ +F++M +  V    +T++++L AC +   +  G + +  ++
Sbjct: 830 WNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWK-YFDSM 888

Query: 472 KANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
             +Y +   + +   ++D+  + G + +A  L+  M    +   W A++    +H
Sbjct: 889 ITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIH 943



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 165/326 (50%), Gaps = 9/326 (2%)

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAV-ELFCRMRQAF 338
           A  L+  Y   G+  +A  +F     ++ + W+  +  +  +  S+  V E+F  +    
Sbjct: 459 AKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKG 518

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           V  +   +   L+ C  +  + LG +IH  +++ G   DV++  ALM+ Y +C  +E + 
Sbjct: 519 VVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKAN 578

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS-L 457
           ++F E P    + WN  I+  +Q  ++ K + +F KM    + A   T   VL+A  S L
Sbjct: 579 QVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQASISEL 638

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
             L  G + H   ++  +D DV V  +LIDMY K  S+T A+ VFD M + N  +WN+++
Sbjct: 639 GFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLV 698

Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
           SGYS  G+  + L++ + M++ G +P+ +T+ G++S  +  G  ++  A+F  M    G+
Sbjct: 699 SGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAFFAQM-QQEGV 757

Query: 578 EP------CIEHYTSMVSLLGRAGHL 597
            P      C+    + +SLL +   +
Sbjct: 758 MPNSASITCLLRACASLSLLQKGKEI 783


>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Glycine max]
          Length = 785

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 243/706 (34%), Positives = 377/706 (53%), Gaps = 93/706 (13%)

Query: 193 FVGTALIDAFSVCGCVEFARKVFDGL--------------FNDC--FEEALNFFSQMRAV 236
           F    ++ A +  G ++ AR+VFD +              +N    F+ A++ F +M + 
Sbjct: 80  FSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSS 139

Query: 237 GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNA 296
           G  P  FTF  VL +C     + V K  H   +K      + VA +LL++Y K G+   A
Sbjct: 140 GISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMA 199

Query: 297 RRIFEEMPKKDVIPWSFMIA---RYAQTDLS----------------------------I 325
           + +F+ M  KD   W+ MI+   ++ Q DL+                            I
Sbjct: 200 KVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDI 259

Query: 326 DAVELFCRM-RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNAL 384
            A+E F  M + + + P++FT  SVL ACA  E L LG QIH+ +VR  +     V NAL
Sbjct: 260 RALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNAL 319

Query: 385 MDVYAKCGRMENS---VEL------------------------------FAESPKRNHVT 411
           + +YAK G +E +   VE+                              F     R+ V 
Sbjct: 320 ISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVA 379

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
           W  MIVGY Q G +  A+++F  M+ E       T ++VL   +SLA+L+ G Q+H + +
Sbjct: 380 WTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAI 439

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE-VSWNAMISGYSMHGLSAEVL 530
           +      V V NALI MY++ GSI DAR +F+ +  + + ++W +MI   + HGL  E +
Sbjct: 440 RLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAI 499

Query: 531 KVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSL 590
           ++F+ M +   +P+++T+VGVLSAC++ GL+EQG++YF  M   + IEP   HY  M+ L
Sbjct: 500 ELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDL 559

Query: 591 LGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATH 650
           LGRAG L++A   I  +P +P V+ W +LL +C +H  V++ +++A+ +L  +P +   +
Sbjct: 560 LGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAY 619

Query: 651 VLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIR 699
           + L+N  +    WE           KA  KE G SW++ +  VH F   D  H   + I 
Sbjct: 620 LALANTLSACGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIFGVEDALHPQRDAIY 679

Query: 700 GMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRII 759
            M+  +  + +K G+IPD ++VL D+ ++ KE+ L  HSEKLA+AFAL   P  + +RI+
Sbjct: 680 CMISKIWKEIKKMGFIPDTNSVLHDLEQEVKEQILRHHSEKLAIAFALINTPKHTTVRIM 739

Query: 760 KNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           KNLR+C DCH+AI+ IS +V+REII+RD  RFHHF+DG CSC D+W
Sbjct: 740 KNLRVCNDCHSAIRYISLLVEREIIVRDATRFHHFKDGSCSCQDYW 785



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 172/636 (27%), Positives = 269/636 (42%), Gaps = 139/636 (21%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKG-NCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERN 121
           LQS I++ D      IH +++K G   L +F TN LLN+YVK     DA +LFDEMP + 
Sbjct: 19  LQSAIKSRDPFIGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKT 78

Query: 122 T-------------------------------ISFVTTIQGYTVSSQFVEAVGLFSTLHR 150
           T                               +S+ T I GY     F  AV  F  +  
Sbjct: 79  TFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVS 138

Query: 151 EGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEF 210
            G     F FT  L    +    ++   V + V KLG      V  +L++ ++ CG    
Sbjct: 139 SGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVM 198

Query: 211 ARKVFDGL-FNDC---------------FEEALNFFSQM--------------------- 233
           A+ VFD +   D                F+ AL  F QM                     
Sbjct: 199 AKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYD 258

Query: 234 -----------RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAH--------------GCA 268
                      ++   KP+ FT   VL AC   +++++ K  H              G A
Sbjct: 259 IRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNA 318

Query: 269 LKTCYEMDLYVAVA-------------------LLDLYTKSGEISNARRIFEEMPKKDVI 309
           L + Y     V VA                   LLD Y K G+I  AR IF+ +  +DV+
Sbjct: 319 LISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVV 378

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
            W+ MI  YAQ  L  DA+ LF  M +    PN +T  +VL   +++  LD G Q+H++ 
Sbjct: 379 AWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVA 438

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE-SPKRNHVTWNTMIVGYVQLGEVGKA 428
           +R+  +S V V NAL+ +Y++ G ++++ ++F      R+ +TW +MI+   Q G   +A
Sbjct: 439 IRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEA 498

Query: 429 MIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALI 486
           + +F KML   +    +TY  VL AC  +  +E G     L +K  ++++   ++   +I
Sbjct: 499 IELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNL-MKNVHNIEPTSSHYACMI 557

Query: 487 DMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH------GLSAEVLKVFDLMQQR 539
           D+  + G + +A   + +M  + + V+W +++S   +H       ++AE L + D     
Sbjct: 558 DLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLID----- 612

Query: 540 GWRPNN----LTFVGVLSACSNGGLLEQGEAYFKSM 571
              PNN    L     LSAC   G  E      KSM
Sbjct: 613 ---PNNSGAYLALANTLSAC---GKWEDAAKVRKSM 642



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 151/303 (49%), Gaps = 48/303 (15%)

Query: 358 GLDLGNQIHSLVVRVGLLSD------------VFVSNALMDVYAKCGRMENSVELFAESP 405
           G+ L N + +L V+ G  SD             F  N ++  +AK G ++++  +F E P
Sbjct: 47  GVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILSAHAKAGNLDSARRVFDEIP 106

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
           + + V+W TMIVGY  LG    A+  F +M+   +  T+ T+++VL +CA+  AL+ G +
Sbjct: 107 QPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKK 166

Query: 466 VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMM-----NDWNE---------- 510
           VH   VK      V VAN+L++MYAKCG    A++VFD M     + WN           
Sbjct: 167 VHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQ 226

Query: 511 ----------------VSWNAMISGYSMHGLSAEVLKVFDLM-QQRGWRPNNLTFVGVLS 553
                           VSWN++I+GY   G     L+ F  M +    +P+  T   VLS
Sbjct: 227 FDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLS 286

Query: 554 ACSNGGLLEQGEAYFKSMV-ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
           AC+N   L+ G+     +V A+  I   + +  +++S+  ++G ++ A +++E I   PS
Sbjct: 287 ACANRESLKLGKQIHAHIVRADVDIAGAVGN--ALISMYAKSGAVEVAHRIVE-ITGTPS 343

Query: 613 VMI 615
           + +
Sbjct: 344 LNV 346


>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
 gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
          Length = 552

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 222/543 (40%), Positives = 316/543 (58%), Gaps = 24/543 (4%)

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
           E DL+    +L  Y ++ ++  AR +FE MP++D++ W+ M++ YAQ     +A E+F +
Sbjct: 23  ERDLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSWNAMLSGYAQNGFVDEAREIFYK 82

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           M       N  ++  +L A      ++   ++    +   L+S     N LM  + +  R
Sbjct: 83  M----PLKNGISWNGLLAAYVQNGRIEDAKRLFESKMDWTLVS----WNCLMGGFVRKRR 134

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
                 LF   P+R+ ++W+ MI GY Q G   +A+  F +M  +       +++  L  
Sbjct: 135 -----NLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALST 189

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
           C+++AALE G Q+HC  VKA Y     V NAL+ MY KCGSI +AR  F  + + + VSW
Sbjct: 190 CSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSW 249

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA 573
           N MI GY+ HG   E L VF+LM+  G RP++ T V VL+ACS+ GL++QG  YF SM  
Sbjct: 250 NTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNR 309

Query: 574 NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGR 633
           +YGI   + HYT MV LLGRAG L++A  L++ +PF+P    W ALLGA  IH N E+G 
Sbjct: 310 DYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGE 369

Query: 634 LSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMV 682
            +AQ I + EP +   ++LLS +YA +  W            K   K PG SW+E Q  +
Sbjct: 370 KAAQIIFEMEPHNSGMYILLSKLYAASGRWSDAGKMRLEMRNKGVKKVPGYSWLEVQNKI 429

Query: 683 HYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLA 742
           H F+ GDTSH   + I   LE +++K ++ GYI   + V  DV E+EK   L  HSEKLA
Sbjct: 430 HTFKVGDTSHPHTDKIYTFLEEMDLKLKQEGYISSTNLVFHDVEEEEKVHMLKYHSEKLA 489

Query: 743 LAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCG 802
           +A+ +  +P   PIR+IKNLR+C DCH AIK ISKIV R II+RD HRFH+F+ G CSC 
Sbjct: 490 VAYGILYIPAGRPIRVIKNLRVCEDCHNAIKYISKIVGRLIILRDNHRFHYFEGGSCSCR 549

Query: 803 DFW 805
           DFW
Sbjct: 550 DFW 552



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 163/355 (45%), Gaps = 18/355 (5%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           DLF+ NV+L  YV+   L  A  LF+ MPER+ +S+   + GY  +    EA  +F  + 
Sbjct: 25  DLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSWNAMLSGYAQNGFVDEAREIFYKMP 84

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDS-NAFVG------TALIDAF 202
            +    N  ++   L   V  G  E    +F         S N  +G        L D  
Sbjct: 85  LK----NGISWNGLLAAYVQNGRIEDAKRLFESKMDWTLVSWNCLMGGFVRKRRNLFDNM 140

Query: 203 SVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAK 262
                + ++  +     N C EEAL+FF +M+    + N  +F   L  C  +  + + +
Sbjct: 141 PQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAALELGR 200

Query: 263 SAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTD 322
             H   +K  Y+   YV  ALL +Y K G I  AR  F+E+ +KDV+ W+ MI  YA+  
Sbjct: 201 QLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHGYARHG 260

Query: 323 LSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ-IHSLVVRVGLLSDVFVS 381
              +A+ +F  M+   + P+  T VSVL AC+    +D G++  +S+    G+ + +   
Sbjct: 261 FGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHY 320

Query: 382 NALMDVYAKCGRMENSVELFAESP-KRNHVTWNTM-----IVGYVQLGEVGKAMI 430
             ++D+  + G++E +  L    P + +  TW  +     I G  +LGE    +I
Sbjct: 321 TCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAQII 375



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 130/307 (42%), Gaps = 42/307 (13%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  S+   L + +QN  ++ A     ++ +      L + N L+  +V+  R      LF
Sbjct: 87  NGISWNGLLAAYVQNGRIEDAK----RLFESKMDWTLVSWNCLMGGFVRKRR-----NLF 137

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D MP+R++IS+   I GY+ +    EA+  F  + R+   LN  +FT  L    ++   E
Sbjct: 138 DNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAALE 197

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GLF 219
           L   +   + K G+ +  +VG AL+  +  CG ++ AR  F                G  
Sbjct: 198 LGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHGYA 257

Query: 220 NDCF-EEALNFFSQMRAVGFKPNNFTFAFVLKAC-------LGLDTIRVAKSAHGCALKT 271
              F EEAL  F  M+  G +P++ T   VL AC        G +        +G   K 
Sbjct: 258 RHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKL 317

Query: 272 CYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIAR---YAQTDLSIDA 327
            +         ++DL  ++G++  A+ + + MP + D   W  ++     +  T+L   A
Sbjct: 318 VH------YTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKA 371

Query: 328 VELFCRM 334
            ++   M
Sbjct: 372 AQIIFEM 378



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 118/268 (44%), Gaps = 42/268 (15%)

Query: 388 YAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTY 447
           Y +  + + + +LF + P+R+  +WN M+ GYV+  ++  A  +F +M E  +    V++
Sbjct: 5   YLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDI----VSW 60

Query: 448 SSVLRACASLAALEPGMQVHCLTVKANYDMDV---VVANALIDMYAKCGSITDARLVFDM 504
           +++L   A    ++   ++        Y M +   +  N L+  Y + G I DA+ +F+ 
Sbjct: 61  NAMLSGYAQNGFVDEAREIF-------YKMPLKNGISWNGLLAAYVQNGRIEDAKRLFES 113

Query: 505 MNDWNEVSWN--------------------------AMISGYSMHGLSAEVLKVFDLMQQ 538
             DW  VSWN                          AMI+GYS +G S E L  F  MQ+
Sbjct: 114 KMDWTLVSWNCLMGGFVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQR 173

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLD 598
              R N  +F   LS CSN   LE G      +V   G +       +++++  + G +D
Sbjct: 174 DCERLNRSSFTCALSTCSNIAALELGRQLHCRLV-KAGYQTGWYVGNALLAMYCKCGSID 232

Query: 599 KAAKLIEGIPFQPSVMIWRALLGACIIH 626
           +A    + I  +  V+ W  ++     H
Sbjct: 233 EARDAFQEI-LEKDVVSWNTMIHGYARH 259



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 105/262 (40%), Gaps = 32/262 (12%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
            N  S+  +L +C     L+    +HC+++K G     +  N LL +Y K   + +A   
Sbjct: 178 LNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDA 237

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           F E+ E++ +S+ T I GY       EA+ +F  +   G  + P   T  + VL +   A
Sbjct: 238 FQEILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTG--IRPDDAT-MVSVLAACSHA 294

Query: 174 ELCPCVFACVYKLGHDSNAFVG----TALIDAFSVCGCVEFARKVFDGLFNDCFEEALNF 229
            L        Y +  D          T ++D     G +E A+ +               
Sbjct: 295 GLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNL--------------- 339

Query: 230 FSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY---VAVALLDL 286
              M+ + F+P+  T+     A LG   I         A +  +EM+ +   + + L  L
Sbjct: 340 ---MKNMPFEPDAATWG----ALLGASRIHGNTELGEKAAQIIFEMEPHNSGMYILLSKL 392

Query: 287 YTKSGEISNARRIFEEMPKKDV 308
           Y  SG  S+A ++  EM  K V
Sbjct: 393 YAASGRWSDAGKMRLEMRNKGV 414



 Score = 40.0 bits (92), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 30/140 (21%), Positives = 63/140 (45%), Gaps = 10/140 (7%)

Query: 485 LIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPN 544
           +I  Y +      AR +FD M + +  SWN M++GY  +        +F+ M +R    +
Sbjct: 1   MISGYLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPER----D 56

Query: 545 NLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLI 604
            +++  +LS  +  G +++    F  M    GI      +  +++   + G ++ A +L 
Sbjct: 57  IVSWNAMLSGYAQNGFVDEAREIFYKMPLKNGIS-----WNGLLAAYVQNGRIEDAKRLF 111

Query: 605 EGIPFQPSVMIWRALLGACI 624
           E      +++ W  L+G  +
Sbjct: 112 ES-KMDWTLVSWNCLMGGFV 130


>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 649

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 214/584 (36%), Positives = 346/584 (59%), Gaps = 19/584 (3%)

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           P   T   ++ +    +++  A   H   +   ++ D ++A  L++++++   + NAR++
Sbjct: 67  PTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKV 126

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL 359
           F++  K+ +  W+ +    A      D +EL+ RM    V+ ++FT+  +L+AC   E L
Sbjct: 127 FDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECL 186

Query: 360 ----DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTM 415
                 G +IH+ ++R G  + V V   LMD+YA+ G +  +  +F E P +N V+W+ M
Sbjct: 187 VSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAM 246

Query: 416 IVGYVQLGEVGKAMIMFSKML---EEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
           I  Y + G+  +A+ +F +M+    + VP + VT  SVL+ACA+ AALE G  +H   ++
Sbjct: 247 IACYAKNGKPYEALELFREMMLNTHDSVPNS-VTMVSVLQACAAFAALEQGKLIHAYILR 305

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
              D  + V +ALI MYA+CG +   +L+FD M+  + V WN++IS Y +HG   + +K+
Sbjct: 306 RGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKI 365

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
           F+ M   G+ P++++F+ VL ACS+ GL+E+G+  F+SMV  +GI+P +EHY  MV LLG
Sbjct: 366 FEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLG 425

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVL 652
           RA  LD+AAK+IE +  +P   +W +LLGAC IH +VE+   +++ +   EP +   +VL
Sbjct: 426 RANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYVL 485

Query: 653 LSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGM 701
           L++IYA A  W+           +   K PG SWIE +  ++ F + D  +     +  +
Sbjct: 486 LADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHAL 545

Query: 702 LEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKN 761
           L  L+ + ++ GY P    VL D+ ++EKER +  HSEKLA+AF L        IRI KN
Sbjct: 546 LVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKN 605

Query: 762 LRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           LR+C DCH+  K ISK   REI++RD++RFHHF+DG CSCGD+W
Sbjct: 606 LRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 649



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 87/378 (23%), Positives = 175/378 (46%), Gaps = 30/378 (7%)

Query: 56  SHSYATSLQSC-------IQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLP 108
           SH    + Q+C        + + L  A+ +H  ++  G   D F    L+N++ +L+ + 
Sbjct: 62  SHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVD 121

Query: 109 DATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLV 168
           +A K+FD+  +R    +    +   ++ +  + + L+  ++  G   + F +T  LK  V
Sbjct: 122 NARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACV 181

Query: 169 S----MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL------ 218
           +    + + +    + A + + G+ ++  V T L+D ++  GCV +A  VFD +      
Sbjct: 182 ASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVV 241

Query: 219 ----FNDCFE------EALNFFSQMRAVGFK--PNNFTFAFVLKACLGLDTIRVAKSAHG 266
                  C+       EAL  F +M        PN+ T   VL+AC     +   K  H 
Sbjct: 242 SWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHA 301

Query: 267 CALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSID 326
             L+   +  L V  AL+ +Y + G++ + + IF+ M KKDV+ W+ +I+ Y        
Sbjct: 302 YILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRK 361

Query: 327 AVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI-HSLVVRVGLLSDVFVSNALM 385
           A+++F  M     +P+  +F+SVL AC+    ++ G ++  S+V   G+   V     ++
Sbjct: 362 AIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMV 421

Query: 386 DVYAKCGRMENSVELFAE 403
           D+  +  R++ + ++  +
Sbjct: 422 DLLGRANRLDEAAKIIED 439



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 86/396 (21%), Positives = 163/396 (41%), Gaps = 62/396 (15%)

Query: 58  SYATSLQSCIQND----DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
           +Y   L++C+ ++     LQ    IH  +L+ G    +     L+++Y +   +  A+ +
Sbjct: 172 TYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAV 231

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFT--AFLKVLVSMG 171
           FDEMP +N +S+   I  Y  + +  EA+ LF  +    H+  P + T  + L+   +  
Sbjct: 232 FDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFA 291

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG-------LFNDCF- 223
             E    + A + + G DS   V +ALI  ++ CG +E  + +FD        L+N    
Sbjct: 292 ALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLIS 351

Query: 224 --------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
                    +A+  F +M   GF P++ +F  VL AC     +   K      +K   E 
Sbjct: 352 SYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVK---EH 408

Query: 276 DLYVAVA----LLDLYTKSGEISNARRIFEEM---PKKDVIPWSFMIARYAQTDLSIDAV 328
            +  +V     ++DL  ++  +  A +I E++   P   V  W  ++           A 
Sbjct: 409 GIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKV--WGSLLG----------AC 456

Query: 329 ELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVY 388
            + C +  A  A  +            +E  + GN +        LL+D++    + D  
Sbjct: 457 RIHCHVELAERASKRLF---------KLEPTNAGNYV--------LLADIYAEAEMWDEV 499

Query: 389 AKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
            +  ++ +S EL  + P R+ +     I  +  + E
Sbjct: 500 KRVKKLLDSREL-QKVPGRSWIEVRRKIYSFTSVDE 534



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 104/219 (47%), Gaps = 11/219 (5%)

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
           N +I    + G + +A+ + S    E  P T+ T   ++ + A   +L   + VH L V 
Sbjct: 42  NHLIQSLCKQGNLKQALYLLS---HESNP-TQQTCELLILSAARRNSLSDALDVHQLLVD 97

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
             +D D  +A  LI+M+++  ++ +AR VFD         WNA+    ++ G   +VL++
Sbjct: 98  GGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLEL 157

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNG----GLLEQGEAYFKSMVANYGIEPCIEHYTSMV 588
           +  M   G   +  T+  +L AC         L++G+    + +  +G    +   T+++
Sbjct: 158 YPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKE-IHAHILRHGYGAHVHVMTTLM 216

Query: 589 SLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
            +  R G +  A+ + + +P + +V+ W A++ AC   N
Sbjct: 217 DMYARFGCVSYASAVFDEMPVK-NVVSWSAMI-ACYAKN 253



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 28/131 (21%), Positives = 57/131 (43%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           NS +  + LQ+C     L+    IH  +L++G    L   + L+ +Y +  +L     +F
Sbjct: 276 NSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIF 335

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D M +++ + + + I  Y +     +A+ +F  +   G   +  +F + L      G  E
Sbjct: 336 DRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVE 395

Query: 175 LCPCVFACVYK 185
               +F  + K
Sbjct: 396 EGKKLFESMVK 406


>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 617

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 215/554 (38%), Positives = 328/554 (59%), Gaps = 42/554 (7%)

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
           S A+ IF+ +   +V  W+  +  +A+ D   DA+ LF R+R+  ++P+ +T   VL+AC
Sbjct: 64  SYAKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKAC 123

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM------------------- 394
           + +  +  G  +H  V ++GL S++F+ N ++ +YA CG +                   
Sbjct: 124 SRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWN 183

Query: 395 ------------ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPA 442
                       E + +LFAE P+RN  +W +MI GY Q G+  +A+ +F +M +  +  
Sbjct: 184 IMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLP 243

Query: 443 TEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVF 502
            EVT  +VL ACA +  L  G ++H  + ++ Y+ ++ V N LIDMY KCG + DA  +F
Sbjct: 244 NEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIF 303

Query: 503 DMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLE 562
           D M +   VSW+AMI+G + HG + + L +F+ M   G +PN +TF+G+L ACS+ G++E
Sbjct: 304 DNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVE 363

Query: 563 QGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           +G  YF SM  +YGI P IEHY  MV L  RAG L +A + I  +P  P+ ++W ALLG 
Sbjct: 364 KGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGG 423

Query: 623 CIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEP 671
           C +H N+++   + +H+   +P ++  +V+LSNIYA A  WE  A            K P
Sbjct: 424 CKVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTP 483

Query: 672 GLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKE 731
           G S I  +G+V+ F AGD +H     I    E L  + +  GY+P+ S VL D+ ED+KE
Sbjct: 484 GWSSIMVEGVVYNFVAGDDTHPQTEEIFQTWEKLLQRMKLKGYVPNTSVVLLDMEEDQKE 543

Query: 732 RYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRF 791
           ++L+ HSEKLA+ F L K  P + IRI+KNLR+C DCH A+KIIS +  REI++RD +RF
Sbjct: 544 KFLYRHSEKLAVVFGLIKTTPGTVIRIMKNLRVCEDCHAALKIISVVSTREIVVRDRNRF 603

Query: 792 HHFQDGCCSCGDFW 805
           H F++G CSCGD+W
Sbjct: 604 HCFKNGSCSCGDYW 617



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 174/337 (51%), Gaps = 35/337 (10%)

Query: 221 DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
           D   +A++ F ++R     P+++T +FVLKAC  L  +R  K  HG   K   + ++++ 
Sbjct: 92  DSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQ 151

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIAR----------------------- 317
             ++ LY   GEI  AR++F++MP++DVI W+ MIAR                       
Sbjct: 152 NMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVR 211

Query: 318 --------YAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
                   YAQ   S +A++LF  M  A + PN+ T V+VL ACA M  L LG +IH   
Sbjct: 212 SWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFS 271

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAM 429
            R G   ++ V N L+D+Y KCG +E++  +F    +R  V+W+ MI G    G    A+
Sbjct: 272 NRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDAL 331

Query: 430 IMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALID 487
            +F+KM+   V    VT+  +L AC+ +  +E G + +  ++  +Y +   + +   ++D
Sbjct: 332 ALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRK-YFASMTRDYGIVPRIEHYGCMVD 390

Query: 488 MYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
           ++++ G + +A   + +M    N V W A++ G  +H
Sbjct: 391 LFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVH 427



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 129/553 (23%), Positives = 234/553 (42%), Gaps = 116/553 (20%)

Query: 14  QLTHQSKINAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFN--SHSYATS--LQSCIQN 69
           QL   S++  W   L + A    +  S +    + + + EF+     Y  S  L++C + 
Sbjct: 71  QLLDASEVTHWNTCLRSFA----EGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRL 126

Query: 70  DDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTI 129
            D++    +H  V K G   ++F  N+++++Y     +  A K+FD+MP+R+ I++    
Sbjct: 127 LDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITW---- 182

Query: 130 QGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHD 189
                                             +  LV MG AE    +FA +     +
Sbjct: 183 -------------------------------NIMIARLVKMGDAEGAYKLFAEM----PE 207

Query: 190 SNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVL 249
            N    T++I  ++ CG  +               EA++ F +M   G  PN  T   VL
Sbjct: 208 RNVRSWTSMIGGYAQCGKSK---------------EAIDLFLEMEDAGLLPNEVTVVAVL 252

Query: 250 KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
            AC  +  + + +  H  + ++ YE ++ V   L+D+Y K G + +A RIF+ M ++ V+
Sbjct: 253 VACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVV 312

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
            WS MIA  A    + DA+ LF +M    V PN  TF+ +L AC+ M  ++ G +  + +
Sbjct: 313 SWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASM 372

Query: 370 VR-VGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMIVGYVQLGEVGK 427
            R  G++  +     ++D++++ G ++ + E     P   N V W  ++ G     +V K
Sbjct: 373 TRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGC----KVHK 428

Query: 428 AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALID 487
            +    K+ EE              A   L+ L+P           N    VV++N    
Sbjct: 429 NI----KLAEE--------------ATRHLSKLDP----------LNDGYYVVLSN---- 456

Query: 488 MYAKCGSITDARLVFDMMND--------WNEVSWNAM----ISGYSMHGLSAEVLKVFDL 535
           +YA+ G   D   V  +M D        W+ +    +    ++G   H  + E+ + ++ 
Sbjct: 457 IYAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMVEGVVYNFVAGDDTHPQTEEIFQTWEK 516

Query: 536 MQQR----GWRPN 544
           + QR    G+ PN
Sbjct: 517 LLQRMKLKGYVPN 529


>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 707

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 251/722 (34%), Positives = 383/722 (53%), Gaps = 81/722 (11%)

Query: 95  NVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHE 154
           N +++ Y + ++  DA  LFD+MP+RNT+SF   I GY  +    +A  +F  +     E
Sbjct: 56  NAMVSAYFESHKPRDALLLFDQMPQRNTVSFNGMISGYVKNGMVADARKVFDVMP----E 111

Query: 155 LNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKV 214
            N  ++T+ ++  V  G  E    +F  + +     N    T +I        ++ A+K+
Sbjct: 112 RNVVSWTSMVRGYVQEGMVEEAEKLFWEMPR----RNVVSWTVMIGGLLKESRIDDAKKL 167

Query: 215 FDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
           FD +         N       VG          + +A    D ++V              
Sbjct: 168 FDMIPEKDVVVVTNMIGGYCQVGR---------LDEARELFDEMKVR------------- 205

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
            +++    ++  Y K+G +  AR++FE MP+++ + W+ M+  Y Q+    +A ELF  M
Sbjct: 206 -NVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMGYTQSGRMKEAFELFEAM 264

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
              ++            AC  M            +++ GL                 G M
Sbjct: 265 PVKWIV-----------ACNEM------------ILQFGL----------------AGEM 285

Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
             +  +F    +R+  TWN MI  + + G   +A+ +F++M  E V     +  SVL  C
Sbjct: 286 HRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVC 345

Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
           ASLA+L+ G QVH   V++ +D D+ VA+ LI MY KCG +  A+ +F+     + V WN
Sbjct: 346 ASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWN 405

Query: 515 AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
           +MI+GYS HGL  E L VF  M   G +P+ +TF+GVLSACS  G +++G   F++M   
Sbjct: 406 SMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCT 465

Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL 634
           Y +EP IEHY  MV LLGRAG +D+A +L+E +P +P  ++W ALLGAC  H  +++  +
Sbjct: 466 YQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLAEV 525

Query: 635 SAQHILDFEPEDEATHVLLSNIYAMARSWE----------KAASKEPGLSWIENQGMVHY 684
           + + +   EP++   +VLLS++YA    W           +   K PG SWIE +  VH 
Sbjct: 526 AVEKLAKLEPKNAGPYVLLSHMYATKGRWRDVEVLRKKINRRVIKFPGCSWIEVEKKVHM 585

Query: 685 FRAGDT-SHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLAL 743
           F  GD+ SH + ++I  MLE L+   R+AGY PD S VL DV E+EK   L  HSE+LA+
Sbjct: 586 FTGGDSKSHPEQHMITQMLEKLSGFLREAGYCPDGSFVLHDVDEEEKTHSLGYHSERLAV 645

Query: 744 AFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGD 803
           A+ L K+P   PIR++KNLR+C DCH+AIK+I+K+  REII+RD +RFHHF+DG CSC D
Sbjct: 646 AYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKDGSCSCKD 705

Query: 804 FW 805
           FW
Sbjct: 706 FW 707



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 160/365 (43%), Gaps = 66/365 (18%)

Query: 79  HCQVLKKGNCLDLFATNVLLNV---------YVKLNRLPDATKLFDEMPERNTISFVTTI 129
           +CQV +     +LF    + NV         Y K  R+  A KLF+ MPERN +S+   +
Sbjct: 186 YCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAML 245

Query: 130 QGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHD 189
            GYT S +  EA  LF  +                     + W      + AC       
Sbjct: 246 MGYTQSGRMKEAFELFEAM--------------------PVKW------IVAC------- 272

Query: 190 SNAFVGTALIDAFSVCGCVEFARKVFDGLFN----------DCFE------EALNFFSQM 233
                   +I  F + G +  AR +F+G+              FE      EAL  F++M
Sbjct: 273 ------NEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARM 326

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
           +  G   N  +   VL  C  L ++   +  H   +++ ++ DLYVA  L+ +Y K G++
Sbjct: 327 QREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDL 386

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
             A+ IF     KDV+ W+ MI  Y+Q  L  +A+ +F  M  + V P++ TF+ VL AC
Sbjct: 387 VRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSAC 446

Query: 354 ATMEGLDLGNQI-HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVT 411
           +    +  G +I  ++     +   +     ++D+  + GR++ ++EL  + P + + + 
Sbjct: 447 SYSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIV 506

Query: 412 WNTMI 416
           W  ++
Sbjct: 507 WGALL 511



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 148/327 (45%), Gaps = 66/327 (20%)

Query: 287 YTKSGEISNARRIFEE--MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
           Y + G+I NAR++F+   +P++ +  W+ M++ Y ++    DA+ LF +M Q     N  
Sbjct: 29  YGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQR----NTV 84

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           +F                                   N ++  Y K G + ++ ++F   
Sbjct: 85  SF-----------------------------------NGMISGYVKNGMVADARKVFDVM 109

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
           P+RN V+W +M+ GYVQ G V +A  +F +M    V +  V    +L+            
Sbjct: 110 PERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLK------------ 157

Query: 465 QVHCLTVKANYDM----DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY 520
           +      K  +DM    DVVV   +I  Y + G + +AR +FD M   N  +W  M+SGY
Sbjct: 158 ESRIDDAKKLFDMIPEKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGY 217

Query: 521 SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPC 580
           + +G      K+F++M +R    N +++  +L   +  G +++    F++M   + I  C
Sbjct: 218 AKNGRVDVARKLFEVMPER----NEVSWTAMLMGYTQSGRMKEAFELFEAMPVKW-IVAC 272

Query: 581 IEHYTSMVSLLGRAGHLDKAAKLIEGI 607
            E    M+   G AG + +A  + EG+
Sbjct: 273 NE----MILQFGLAGEMHRARMMFEGM 295



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 18/173 (10%)

Query: 486 IDMYAKCGSITDARLVFD--MMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRP 543
           I  Y + G I +AR VFD   +      SWNAM+S Y       + L +FD M QR    
Sbjct: 26  ISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQR---- 81

Query: 544 NNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKL 603
           N ++F G++S     G++      F  M      E  +  +TSMV    + G +++A KL
Sbjct: 82  NTVSFNGMISGYVKNGMVADARKVFDVMP-----ERNVVSWTSMVRGYVQEGMVEEAEKL 136

Query: 604 IEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNI 656
              +P + +V+ W  ++G  +  + ++     A+ + D  PE +   V+++N+
Sbjct: 137 FWEMP-RRNVVSWTVMIGGLLKESRID----DAKKLFDMIPEKDV--VVVTNM 182


>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 705

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 219/519 (42%), Positives = 314/519 (60%), Gaps = 17/519 (3%)

Query: 304 PKKDVIPWSFMIARYAQTDLS-IDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG 362
           P  D   ++ +I  +AQT  S   A+  +  MR+  V+PN+FTF  VL+ACA M  L+LG
Sbjct: 187 PSHDAFLFNTLIRAFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELG 246

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS-----VELFAESPKRNHVTWNTMIV 417
             +H+ +V+ G   D  V N L+ +Y  C +  +S      ++F ESP ++ VTW+ MI 
Sbjct: 247 GAVHASMVKFGFEEDPHVRNTLVHMYCCCCQDGSSGPVSAKKVFDESPVKDSVTWSAMIG 306

Query: 418 GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM 477
           GY + G   +A+ +F +M    V   E+T  SVL ACA L ALE G  +     + N   
Sbjct: 307 GYARAGNSARAVTLFREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIMR 366

Query: 478 DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQ 537
            V + NALIDM+AKCG +  A  VF  M     VSW +MI G +MHG   E + VFD M 
Sbjct: 367 SVELCNALIDMFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMM 426

Query: 538 QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHL 597
           ++G  P+++ F+GVLSACS+ GL+++G  YF +M   + I P IEHY  MV +L RAG +
Sbjct: 427 EQGVDPDDVAFIGVLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRV 486

Query: 598 DKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIY 657
           ++A + +  +P +P+ +IWR+++ AC     +++G   A+ ++  EP  E+ +VLLSNIY
Sbjct: 487 NEALEFVRAMPVEPNQVIWRSIVTACHARGELKLGESVAKELIRREPSHESNYVLLSNIY 546

Query: 658 AMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLN 706
           A    WEK              K PG + IE    ++ F AGD SH     I  M+E + 
Sbjct: 547 AKLLRWEKKTKVREMMDVKGMRKIPGSTMIEMNNEIYEFVAGDKSHDQYKEIYEMVEEMG 606

Query: 707 MKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICV 766
            + ++AGY+P  S VL D+ E++KE  L+ HSEKLA+AFAL   PP +PIRI+KNLR+C 
Sbjct: 607 REIKRAGYVPTTSQVLLDIDEEDKEDALYRHSEKLAIAFALLSTPPGTPIRIVKNLRVCE 666

Query: 767 DCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           DCH+A K ISK+  REI++RD +RFHHF++G CSCGDFW
Sbjct: 667 DCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 705



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/366 (23%), Positives = 154/366 (42%), Gaps = 32/366 (8%)

Query: 118 PERNTISFVTTIQGYTVSSQF-VEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
           P  +   F T I+ +  ++     A+  ++T+ R     N F F   LK    M   EL 
Sbjct: 187 PSHDAFLFNTLIRAFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELG 246

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVC------GCVEFARKVFD-GLFNDCFE----- 224
             V A + K G + +  V   L+  +  C      G V  A+KVFD     D        
Sbjct: 247 GAVHASMVKFGFEEDPHVRNTLVHMYCCCCQDGSSGPVS-AKKVFDESPVKDSVTWSAMI 305

Query: 225 ----------EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
                      A+  F +M+  G  P+  T   VL AC  L  + + K       +    
Sbjct: 306 GGYARAGNSARAVTLFREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIM 365

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
             + +  AL+D++ K G++  A ++F EM  + ++ W+ MI   A     ++AV +F  M
Sbjct: 366 RSVELCNALIDMFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEM 425

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGN-QIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
            +  V P+   F+ VL AC+    +D G+   +++     ++  +     ++D+ ++ GR
Sbjct: 426 MEQGVDPDDVAFIGVLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGR 485

Query: 394 MENSVELFAESP-KRNHVTWNTMIV-----GYVQLGE-VGKAMIMFSKMLEEQVPATEVT 446
           +  ++E     P + N V W +++      G ++LGE V K +I      E         
Sbjct: 486 VNEALEFVRAMPVEPNQVIWRSIVTACHARGELKLGESVAKELIRREPSHESNYVLLSNI 545

Query: 447 YSSVLR 452
           Y+ +LR
Sbjct: 546 YAKLLR 551



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 83/370 (22%), Positives = 143/370 (38%), Gaps = 61/370 (16%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYV----KLNRLP-D 109
           N  ++   L++C     L+    +H  ++K G   D    N L+++Y       +  P  
Sbjct: 226 NKFTFPFVLKACAGMMRLELGGAVHASMVKFGFEEDPHVRNTLVHMYCCCCQDGSSGPVS 285

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A K+FDE P ++++++   I GY  +     AV LF  +   G   +     + L     
Sbjct: 286 AKKVFDESPVKDSVTWSAMIGGYARAGNSARAVTLFREMQVTGVCPDEITMVSVLSACAD 345

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------- 218
           +G  EL   + + + +     +  +  ALID F+ CG V+ A KVF  +           
Sbjct: 346 LGALELGKWLESYIERKNIMRSVELCNALIDMFAKCGDVDRAVKVFREMKVRTIVSWTSM 405

Query: 219 -----FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY 273
                 +    EA+  F +M   G  P++  F  VL AC          S  G   K  Y
Sbjct: 406 IVGLAMHGRGLEAVLVFDEMMEQGVDPDDVAFIGVLSAC----------SHSGLVDKGHY 455

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
             +                      +F  +PK  +  +  M+   ++     +A+E    
Sbjct: 456 YFN------------------TMENMFSIVPK--IEHYGCMVDMLSRAGRVNEALEF--- 492

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD---VFVSNALMDVYAK 390
           +R   V PNQ  + S++ AC     L LG  +   ++R     +   V +SN    +YAK
Sbjct: 493 VRAMPVEPNQVIWRSIVTACHARGELKLGESVAKELIRREPSHESNYVLLSN----IYAK 548

Query: 391 CGRMENSVEL 400
             R E   ++
Sbjct: 549 LLRWEKKTKV 558


>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 808

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 250/730 (34%), Positives = 386/730 (52%), Gaps = 37/730 (5%)

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A  LFD++P      +   I+ Y++    +      S   R   + N + F   LK   +
Sbjct: 82  ARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVLKACSA 141

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------- 218
           +        V     + G  ++ FV TAL+D ++ C     A  VF  +           
Sbjct: 142 LLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAWNAM 201

Query: 219 -----FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY 273
                 +  + + +     M+     PN  T   +L        +   ++ H  +++ C 
Sbjct: 202 LAGYALHGKYSDTIACLLLMQD-DHAPNASTLVALLPLLAQHGALSQGRAVHAYSVRACS 260

Query: 274 EMD----LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVE 329
             D    + V  ALLD+Y K G +  A R+FE M  ++ + WS ++  +      ++A  
Sbjct: 261 LHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFS 320

Query: 330 LFCRMRQ---AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMD 386
           LF  M      F++P   +  S L+ACA +  L LG Q+H+L+ + GL +D+   N+L+ 
Sbjct: 321 LFKDMLAQGLCFLSPT--SVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLS 378

Query: 387 VYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVT 446
           +YAK G ++ +  LF +   ++ V+++ ++ GYVQ G+  +A  +F KM    V     T
Sbjct: 379 MYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVAT 438

Query: 447 YSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN 506
             S++ AC+ LAAL+ G   H   +      +  + NALIDMYAKCG I  +R +FD+M 
Sbjct: 439 MVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMP 498

Query: 507 DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEA 566
             + VSWN MI+GY +HGL  E   +F  M+ +   P+++TF+ ++SACS+ GL+ +G+ 
Sbjct: 499 ARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKR 558

Query: 567 YFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH 626
           +F  M   YGI P +EHY  MV LL R G LD+A + I+G+P +  V +W ALLGAC +H
Sbjct: 559 WFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVH 618

Query: 627 NNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSW 675
            N+++G+  +  I    PE     VLLSNI++ A  +++AA            K PG SW
Sbjct: 619 KNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKSPGCSW 678

Query: 676 IENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLW 735
           IE  G +H F  GD SHA  + I   L+ + +   K GY  D S VL+DV E+EKE+ L 
Sbjct: 679 IEINGSLHAFIGGDRSHAQSSEIYQELDNILVDINKLGYRADTSFVLQDVEEEEKEKALL 738

Query: 736 VHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQ 795
            HSEKLA+AF +  +     I + KNLR+C DCHT IK ++ + +R II+RD +RFHHF+
Sbjct: 739 YHSEKLAIAFGVLTLSEDKTIFVTKNLRVCGDCHTVIKYMTLVRKRAIIVRDANRFHHFK 798

Query: 796 DGCCSCGDFW 805
           +G CSCGDFW
Sbjct: 799 NGQCSCGDFW 808



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 143/512 (27%), Positives = 242/512 (47%), Gaps = 30/512 (5%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N++++   L++C    DL++A  +HC   + G   DLF +  L++VY K      A  +F
Sbjct: 128 NNYTFPFVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVF 187

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVL-----VS 169
             MP R+ +++   + GY +  ++ + +     L ++ H  N     A L +L     +S
Sbjct: 188 RRMPARDVVAWNAMLAGYALHGKYSDTIACL-LLMQDDHAPNASTLVALLPLLAQHGALS 246

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD------------- 216
            G A     V AC     H     VGTAL+D ++ CG + +A +VF+             
Sbjct: 247 QGRAVHAYSVRACSLH-DHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSAL 305

Query: 217 -GLFNDCFE--EALNFFSQMRAVG---FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALK 270
            G F  C    EA + F  M A G     P   + A  L+AC  L  + + K  H    K
Sbjct: 306 VGGFVLCGRMLEAFSLFKDMLAQGLCFLSPT--SVASALRACANLSDLCLGKQLHALLAK 363

Query: 271 TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVEL 330
           +    DL    +LL +Y K+G I  A  +F++M  KD + +S +++ Y Q   + +A  +
Sbjct: 364 SGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRV 423

Query: 331 FCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAK 390
           F +M+   V P+  T VS++ AC+ +  L  G   H  V+  G+ S+  + NAL+D+YAK
Sbjct: 424 FRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAK 483

Query: 391 CGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
           CGR++ S ++F   P R+ V+WNTMI GY   G   +A  +F  M  +     +VT+  +
Sbjct: 484 CGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICL 543

Query: 451 LRACASLAALEPGMQ-VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWN 509
           + AC+    +  G +  H +  K      +     ++D+ A+ G + +A      M    
Sbjct: 544 ISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKA 603

Query: 510 EVS-WNAMISGYSMHGLSAEVLKVFDLMQQRG 540
           +V  W A++    +H       +V  ++QQ G
Sbjct: 604 DVRVWGALLGACRVHKNIDLGKQVSSMIQQLG 635



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 167/328 (50%), Gaps = 7/328 (2%)

Query: 291 GEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVL 350
           G++S AR +F+++P   +  ++ +I  Y+    ++         R+    PN +TF  VL
Sbjct: 77  GDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVL 136

Query: 351 QACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHV 410
           +AC+ +  L     +H    R GL +D+FVS AL+DVYAKC    ++  +F   P R+ V
Sbjct: 137 KACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVV 196

Query: 411 TWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLT 470
            WN M+ GY   G+    +     M ++  P    T  ++L   A   AL  G  VH  +
Sbjct: 197 AWNAMLAGYALHGKYSDTIACLLLMQDDHAPNAS-TLVALLPLLAQHGALSQGRAVHAYS 255

Query: 471 VKA----NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLS 526
           V+A    ++   V+V  AL+DMYAKCG +  A  VF+ M   NEV+W+A++ G+ + G  
Sbjct: 256 VRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRM 315

Query: 527 AEVLKVF-DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYT 585
            E   +F D++ Q     +  +    L AC+N   L  G+    +++A  G+   +    
Sbjct: 316 LEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQ-LHALLAKSGLHTDLTAGN 374

Query: 586 SMVSLLGRAGHLDKAAKLIEGIPFQPSV 613
           S++S+  +AG +D+A  L + +  + +V
Sbjct: 375 SLLSMYAKAGLIDQATTLFDQMVVKDTV 402


>gi|414865824|tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
          Length = 645

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 223/579 (38%), Positives = 336/579 (58%), Gaps = 14/579 (2%)

Query: 241 NNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIF 300
           N+  +A +L++C+    +R  +  H   L +   +D  +A  L+DLY   G +S ARR+F
Sbjct: 67  NHSNYATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRVF 126

Query: 301 EEMPKK-DVIPWSFMIARYAQTDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQACATMEG 358
           +EMP + +V  W+ +I  YA+      A+EL+  M     + P+ FT+  VL+ACA +  
Sbjct: 127 DEMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLD 186

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           L  G ++H  V+R    +DVFV   L+D+YAKCG M+ +  +F ++  R+   WN+MI  
Sbjct: 187 LSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAA 246

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
             Q G   +A+ +   M  E +  T  T  S + A A  +AL  G ++H    +  +   
Sbjct: 247 CGQNGRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGRELHGYGWRRGFGSQ 306

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
             +  +L+DMYAK G +  A ++F+ +     +SWNAMI G+ MHG +    ++F  M+ 
Sbjct: 307 DKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHADHAFELFSRMRS 366

Query: 539 RGW-RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHL 597
                P+++TFVGVLSAC++GG++++ +  F  MV  Y I+P ++HYT +V +LG +G  
Sbjct: 367 EAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTCLVDVLGHSGRF 426

Query: 598 DKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIY 657
            +A+ +I+G+  +P   IW ALL  C IH NVE+  L+ Q +++ EPED   +VLLSNIY
Sbjct: 427 KEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALQKLIELEPEDAGNYVLLSNIY 486

Query: 658 AMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLN 706
           A +  WE+AA            K    SWIE +G  H F  GD SH   + I   LE L 
Sbjct: 487 AESGKWEEAARVRKLMTNRGLKKIIACSWIELKGKFHGFLVGDASHPRSDDIYEELERLE 546

Query: 707 MKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICV 766
               + GY+PD + V  +V +DEK   +W HSE+LA+AF L   PP + + + KNLR+C 
Sbjct: 547 GLISQTGYVPDTTPVFHNVEDDEKRNMVWGHSERLAIAFGLISTPPRTKLLVTKNLRVCE 606

Query: 767 DCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           DCH  IK+IS+I QREIIIRDV+R+HHF +G CSC D W
Sbjct: 607 DCHVVIKLISQIEQREIIIRDVNRYHHFVNGECSCKDHW 645



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 166/359 (46%), Gaps = 23/359 (6%)

Query: 187 GHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN--DCF---------------EEALNF 229
           G   +A + T L+D ++ CG V  AR+VFD + N  + F               E A+  
Sbjct: 98  GTGLDAVLATRLVDLYASCGHVSLARRVFDEMPNQGNVFLWNVLIRAYARDGPCEAAIEL 157

Query: 230 FSQMRAVG-FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYT 288
           +  M A G  KP+NFT+  VLKAC  L  +   +  H   ++T +  D++V   L+D+Y 
Sbjct: 158 YRAMLAYGSMKPDNFTYPPVLKACAALLDLSAGREVHDRVMRTNWATDVFVCTGLIDMYA 217

Query: 289 KSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVS 348
           K G +  A  +F +   +D   W+ MIA   Q     +A+ L   M    +AP   T VS
Sbjct: 218 KCGCMDEAWAVFNDTTIRDAAVWNSMIAACGQNGRPAEALTLCRNMAAEGIAPTIATLVS 277

Query: 349 VLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRN 408
            + A A    L  G ++H    R G  S   +  +L+D+YAK G +  +  LF +   R 
Sbjct: 278 AISAAAVASALPRGRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVMVAHVLFEQLLHRE 337

Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKMLEE-QVPATEVTYSSVLRACASLAALEPGMQVH 467
            ++WN MI G+   G    A  +FS+M  E QV    +T+  VL AC     ++   +V 
Sbjct: 338 LISWNAMICGFGMHGHADHAFELFSRMRSEAQVMPDHITFVGVLSACNHGGMVQEAKEVF 397

Query: 468 CLTVKANYDMDVVVAN--ALIDMYAKCGSITDARLVFD-MMNDWNEVSWNAMISGYSMH 523
            L V   Y +   V +   L+D+    G   +A  V   M+   +   W A+++G  +H
Sbjct: 398 DLMVTV-YSIKPTVQHYTCLVDVLGHSGRFKEASDVIKGMLVKPDSGIWGALLNGCKIH 455



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 114/462 (24%), Positives = 195/462 (42%), Gaps = 26/462 (5%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           S +N  +YAT L+SC+ +  ++    +H ++L  G  LD      L+++Y     +  A 
Sbjct: 64  SPYNHSNYATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLAR 123

Query: 112 KLFDEMPER-NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNP--FAFTAFLKVLV 168
           ++FDEMP + N   +   I+ Y        A+ L+  +   G  + P  F +   LK   
Sbjct: 124 RVFDEMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYG-SMKPDNFTYPPVLKACA 182

Query: 169 SMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF-----------DG 217
           ++        V   V +    ++ FV T LID ++ CGC++ A  VF           + 
Sbjct: 183 ALLDLSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNS 242

Query: 218 LFNDCFE-----EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC 272
           +   C +     EAL     M A G  P   T    + A      +   +  HG   +  
Sbjct: 243 MIAACGQNGRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGRELHGYGWRRG 302

Query: 273 YEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFC 332
           +     +  +LLD+Y KSG +  A  +FE++  +++I W+ MI  +     +  A ELF 
Sbjct: 303 FGSQDKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHADHAFELFS 362

Query: 333 RMR-QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV-GLLSDVFVSNALMDVYAK 390
           RMR +A V P+  TFV VL AC     +    ++  L+V V  +   V     L+DV   
Sbjct: 363 RMRSEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTCLVDVLGH 422

Query: 391 CGRMENSVELFAES-PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSS 449
            GR + + ++      K +   W  ++ G      V  A +   K++E + P     Y  
Sbjct: 423 SGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALQKLIELE-PEDAGNYVL 481

Query: 450 VLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAK 491
           +    A     E   +V  L    N  +  ++A + I++  K
Sbjct: 482 LSNIYAESGKWEEAARVRKLMT--NRGLKKIIACSWIELKGK 521



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 95/186 (51%), Gaps = 6/186 (3%)

Query: 441 PATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARL 500
           P     Y+++LR+C    A+ PG Q+H   + +   +D V+A  L+D+YA CG ++ AR 
Sbjct: 65  PYNHSNYATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARR 124

Query: 501 VFD-MMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG-WRPNNLTFVGVLSACSNG 558
           VFD M N  N   WN +I  Y+  G     ++++  M   G  +P+N T+  VL AC+  
Sbjct: 125 VFDEMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAAL 184

Query: 559 GLLEQG-EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWR 617
             L  G E + + M  N+  +  +   T ++ +  + G +D+A  +      + +  +W 
Sbjct: 185 LDLSAGREVHDRVMRTNWATDVFV--CTGLIDMYAKCGCMDEAWAVFNDTTIRDAA-VWN 241

Query: 618 ALLGAC 623
           +++ AC
Sbjct: 242 SMIAAC 247


>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
          Length = 677

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 212/578 (36%), Positives = 334/578 (57%), Gaps = 15/578 (2%)

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
           +PN+ TF   L AC  L  +  A+S    A    Y  D++V  ALL LY++ G +  A R
Sbjct: 104 RPNSTTFTLTLTACARLGDLDAAESVRVRAFAAGYGHDVFVCSALLHLYSRCGAMEEAIR 163

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           +F+ MP+KD + WS M+A +      ++A+ ++ RMR+  V+ ++   V V+QAC +   
Sbjct: 164 VFDGMPRKDRVAWSTMVAGFVTAGRPVEALAMYSRMREHGVSDDEVVMVGVIQACMSTGN 223

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
             +G  +H  ++R  +  DV  + +L+ +YAK G ++ + ++F   P RN VTW+ +I G
Sbjct: 224 ARIGASVHGRLLRHCMRMDVVTTTSLVSMYAKNGHLDVACQVFRMMPYRNDVTWSALISG 283

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           + Q G   +A+ +F ++  + +        S L ACAS+  L+ G  +H   ++   +  
Sbjct: 284 FAQNGRAVEALDLFRELQADGLQPCSWALVSALLACASVGFLKLGKSIHGFILR-RLEWQ 342

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
            ++  A++DMY+KCGS+  AR +F+ ++  + V WNA+I+    HG   + L +F  + +
Sbjct: 343 CILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAIIACCGTHGCGHDALALFQELNE 402

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLD 598
            G +P++ TF  +LSA S+ GL+E+G+ +F  M+  +GIEP  +HY  +V LL R+G ++
Sbjct: 403 TGIKPDHATFASLLSALSHSGLVEEGKFWFDRMIKEFGIEPAEKHYVCIVDLLARSGLVE 462

Query: 599 KAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYA 658
           +A  ++  +  +P++ IW  LL  C+ +  +E+G   A+ IL+  PED     L+SN+YA
Sbjct: 463 EANDMLASMQTEPTIAIWVILLSGCLNNKKLELGETIAKKILELRPEDIGVLALVSNLYA 522

Query: 659 MARSWEK-----------AASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNM 707
            A+ W+K            + K PG S IE +G  H F   D SH     I  M+  LN 
Sbjct: 523 AAKKWDKVREIRKLMKDSGSKKVPGYSLIEVKGTRHAFVMEDQSHPQHREILKMVAKLNS 582

Query: 708 KSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVD 767
           + RK GY+P    V  D+ ED+   Y   HSE+LA+AF L    P + + IIKNLR+C D
Sbjct: 583 EMRKLGYVPRTEFVYHDLDEDQLLSY---HSERLAIAFGLLNTSPGTRLVIIKNLRVCGD 639

Query: 768 CHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           CH AIK ISKIV REI++RD  RFHHF+DG CSCGD+W
Sbjct: 640 CHDAIKYISKIVDREIVVRDAKRFHHFKDGACSCGDYW 677



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/317 (30%), Positives = 168/317 (52%), Gaps = 4/317 (1%)

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV 370
           W+ +++ +++      A+ +F R   +   PN  TF   L ACA +  LD    +     
Sbjct: 76  WNGLLSAHSRAGAPGAALRVF-RALPSSARPNSTTFTLTLTACARLGDLDAAESVRVRAF 134

Query: 371 RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMI 430
             G   DVFV +AL+ +Y++CG ME ++ +F   P+++ V W+TM+ G+V  G   +A+ 
Sbjct: 135 AAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALA 194

Query: 431 MFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYA 490
           M+S+M E  V   EV    V++AC S      G  VH   ++    MDVV   +L+ MYA
Sbjct: 195 MYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYA 254

Query: 491 KCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVG 550
           K G +  A  VF MM   N+V+W+A+ISG++ +G + E L +F  +Q  G +P +   V 
Sbjct: 255 KNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSWALVS 314

Query: 551 VLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQ 610
            L AC++ G L+ G++    ++     + CI   T+++ +  + G L+ A KL   +  +
Sbjct: 315 ALLACASVGFLKLGKSIHGFILRRLEWQ-CILG-TAVLDMYSKCGSLESARKLFNKLSSR 372

Query: 611 PSVMIWRALLGACIIHN 627
             +++W A++  C  H 
Sbjct: 373 -DLVLWNAIIACCGTHG 388



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 206/423 (48%), Gaps = 30/423 (7%)

Query: 156 NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF 215
           N   FT  L     +G  +    V    +  G+  + FV +AL+  +S CG +E A +VF
Sbjct: 106 NSTTFTLTLTACARLGDLDAAESVRVRAFAAGYGHDVFVCSALLHLYSRCGAMEEAIRVF 165

Query: 216 DGL--------------FNDCFE--EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIR 259
           DG+              F       EAL  +S+MR  G   +      V++AC+     R
Sbjct: 166 DGMPRKDRVAWSTMVAGFVTAGRPVEALAMYSRMREHGVSDDEVVMVGVIQACMSTGNAR 225

Query: 260 VAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYA 319
           +  S HG  L+ C  MD+    +L+ +Y K+G +  A ++F  MP ++ + WS +I+ +A
Sbjct: 226 IGASVHGRLLRHCMRMDVVTTTSLVSMYAKNGHLDVACQVFRMMPYRNDVTWSALISGFA 285

Query: 320 QTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVF 379
           Q   +++A++LF  ++   + P  +  VS L ACA++  L LG  IH  ++R  L     
Sbjct: 286 QNGRAVEALDLFRELQADGLQPCSWALVSALLACASVGFLKLGKSIHGFILR-RLEWQCI 344

Query: 380 VSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ 439
           +  A++D+Y+KCG +E++ +LF +   R+ V WN +I      G    A+ +F ++ E  
Sbjct: 345 LGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAIIACCGTHGCGHDALALFQELNETG 404

Query: 440 VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITD 497
           +     T++S+L A +    +E G       +K  + ++    +   ++D+ A+ G + +
Sbjct: 405 IKPDHATFASLLSALSHSGLVEEGKFWFDRMIK-EFGIEPAEKHYVCIVDLLARSGLVEE 463

Query: 498 AR-LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR--GWRPNNLTFVGVLSA 554
           A  ++  M  +     W  ++SG     L+ + L++ + + ++    RP +   +GVL+ 
Sbjct: 464 ANDMLASMQTEPTIAIWVILLSGC----LNNKKLELGETIAKKILELRPED---IGVLAL 516

Query: 555 CSN 557
            SN
Sbjct: 517 VSN 519



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/348 (23%), Positives = 166/348 (47%), Gaps = 25/348 (7%)

Query: 21  INAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHC 80
           ++A  R  +  AAL   +   S+  P        NS ++  +L +C +  DL  A ++  
Sbjct: 80  LSAHSRAGAPGAALRVFRALPSSARP--------NSTTFTLTLTACARLGDLDAAESVRV 131

Query: 81  QVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVE 140
           +    G   D+F  + LL++Y +   + +A ++FD MP ++ +++ T + G+  + + VE
Sbjct: 132 RAFAAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVE 191

Query: 141 AVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALID 200
           A+ ++S +   G   +       ++  +S G A +   V   + +     +    T+L+ 
Sbjct: 192 ALAMYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVS 251

Query: 201 AFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFT 244
            ++  G ++ A +VF  +                 N    EAL+ F +++A G +P ++ 
Sbjct: 252 MYAKNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSWA 311

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
               L AC  +  +++ KS HG  L+   E    +  A+LD+Y+K G + +AR++F ++ 
Sbjct: 312 LVSALLACASVGFLKLGKSIHGFILRR-LEWQCILGTAVLDMYSKCGSLESARKLFNKLS 370

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
            +D++ W+ +IA         DA+ LF  + +  + P+  TF S+L A
Sbjct: 371 SRDLVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSA 418


>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
          Length = 956

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 262/796 (32%), Positives = 393/796 (49%), Gaps = 79/796 (9%)

Query: 68  QNDDLQTAMTIHCQVLKKGNCLD--LFATNVLLNVYVKLNRLPDATKLFDEMPERNTISF 125
           QN+D + A+ +  Q++   +C D  L   N LLN+Y K      A  LF +MPE++ IS+
Sbjct: 182 QNNDPEEALALFSQMVMM-DCFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISW 240

Query: 126 VTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV-LVSMGWAELCPCVFACVY 184
            T I  Y  +    EA+ LF  +  +  E N     + L+   VS    E        ++
Sbjct: 241 STMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEE-----GKKIH 295

Query: 185 KLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFT 244
           K+    +     AL+  ++  G    +  VF  + +D               G +P+   
Sbjct: 296 KIAVWKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSD---------------GIQPDAVA 340

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
              +L A   L   + A   HG  +++ +  +++V  +L++LY+K G + +A ++F+ M 
Sbjct: 341 VVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMI 400

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRM---RQAFVAPNQFTFVSVLQACATMEGLDL 361
            +DV+ WS MIA Y       +A+E+F +M    Q   +  Q +    +Q    +    L
Sbjct: 401 VRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQVMQGITSCYQISMQPQVQPPLAITSCTL 460

Query: 362 GNQI----------------------------------HSLVVRVGLLSDVFVSNALMDV 387
              I                                   S +   GL  D  +      +
Sbjct: 461 ATHIPWKVKAFYMRAHFRWLGHFWEIFPTYPFQAADMSKSNIFAYGLQYDSRILTKFAIM 520

Query: 388 YAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ-------V 440
           Y    R++ +  +F + P      WN MI G+   G    ++ ++SKM+E+        V
Sbjct: 521 YVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGV 580

Query: 441 PATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARL 500
               V+  SVL AC +L AL  G   H   ++  ++ D++VA A++DMY+KCGS+  AR 
Sbjct: 581 IPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARC 640

Query: 501 VFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGL 560
           +FD     + V W+AMI+ Y +HG   + + +FD M + G RP+++TF  VLSACS+ GL
Sbjct: 641 LFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGL 700

Query: 561 LEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
           LE+G+ YF+ M   + I   + +Y  MV LLGRAG L +A  LIE +P +P   IW +LL
Sbjct: 701 LEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLL 760

Query: 621 GACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASK 669
           GAC IHNN+++    A H+   +P     HVLLSNIYA    W            + A+K
Sbjct: 761 GACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANK 820

Query: 670 EPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDE 729
             G S +E    VH F  GD SH     +   LE L    +  GY+P    VL D+ E+ 
Sbjct: 821 IQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHDIEEEA 880

Query: 730 KERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVH 789
           KE  L  HSE+LA+AF L    P + +RI KNLRIC DCH AIK+ISKIV R I++RD+H
Sbjct: 881 KEAALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVILVRDMH 940

Query: 790 RFHHFQDGCCSCGDFW 805
           RFH F+DG CSCGD+W
Sbjct: 941 RFHRFEDGVCSCGDYW 956



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 140/478 (29%), Positives = 221/478 (46%), Gaps = 58/478 (12%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
            Q+C   ++ ++   +H QV K G   D F    L ++Y K   L  A K+FDE P  N 
Sbjct: 11  FQAC---NNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNV 67

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLH-REGHELNPFAFTAFLKVLVSMGWAELCPCVFA 181
             + +T++ Y    Q+ E + LF  +    G   + F     LK    +   EL   +  
Sbjct: 68  HLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHG 127

Query: 182 CVYKLGH-DSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKP 240
              K     S+ FVG+AL++ +S CG +  A KVF+      F+            G++ 
Sbjct: 128 FAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEE-----FQRPDTVLWTSMVTGYQQ 182

Query: 241 NNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIF 300
           NN       +  L L +  V        +  C++ DL +  +LL+LY K+G    A  +F
Sbjct: 183 NNDP-----EEALALFSQMV--------MMDCFDGDLPLVNSLLNLYAKTGCEKIAANLF 229

Query: 301 EEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLD 360
            +MP+KDVI WS MIA YA  + + +A+ LF  M +    PN  T VS LQACA    L+
Sbjct: 230 SKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLE 289

Query: 361 LGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYV 420
            G +IH    ++ +  DV                               V+W  ++ GY 
Sbjct: 290 EGKKIH----KIAVWKDV-------------------------------VSWVALLSGYA 314

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV 480
           Q G   K+M +F  ML + +    V    +L A + L   +  + +H   V++ ++ +V 
Sbjct: 315 QNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVF 374

Query: 481 VANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
           V  +LI++Y+KCGS+ DA  +F  M   + V W++MI+ Y +HG   E L++FD M Q
Sbjct: 375 VGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQ 432



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 193/437 (44%), Gaps = 104/437 (23%)

Query: 259 RVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARY 318
           R     H    KT    D + A  L  LY K   +  AR++F+E P  +V  W+  +  Y
Sbjct: 18  RSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSY 77

Query: 319 AQTDLSIDAVELFCRMR-QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLL-S 376
            +     + + LF  M   A  AP+ FT    L+ACA +  L+LG  IH    +   + S
Sbjct: 78  CREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGS 137

Query: 377 DVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML 436
           D+FV +AL+++Y+KCG+M  ++++F E  + + V W +M+ GY Q  +  +A+ +FS+M 
Sbjct: 138 DMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQM- 196

Query: 437 EEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSIT 496
                        V+  C                    +D D+ + N+L+++YAK G   
Sbjct: 197 -------------VMMDC--------------------FDGDLPLVNSLLNLYAKTGCEK 223

Query: 497 DARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS 556
            A  +F  M + + +SW+ MI+ Y+ +  + E L +F  M ++ + PN++T V  L AC+
Sbjct: 224 IAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACA 283

Query: 557 NGGLLEQGE--------------------------AY-----FKSMVANYGIEP------ 579
               LE+G+                          AY     F++M+++ GI+P      
Sbjct: 284 VSRNLEEGKKIHKIAVWKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSD-GIQPDAVAVV 342

Query: 580 ----------------CIEHYT-------------SMVSLLGRAGHLDKAAKLIEGIPFQ 610
                           C+  Y              S++ L  + G L  A KL +G+  +
Sbjct: 343 KILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVR 402

Query: 611 PSVMIWRALLGACIIHN 627
             V+IW +++ A  IH 
Sbjct: 403 -DVVIWSSMIAAYGIHG 418


>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
          Length = 804

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 262/832 (31%), Positives = 393/832 (47%), Gaps = 135/832 (16%)

Query: 56  SHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKL----NRLPDAT 111
           S  YA  LQ C    +      IH + +K G     +  N LL+ Y +       L DA 
Sbjct: 26  SDHYARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDAR 85

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
           +LFDE+P                             L R     N F + + L +    G
Sbjct: 86  RLFDEIP-----------------------------LARR----NVFTWNSLLSMFAKSG 112

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFS 231
                  VFA +     + +A   T ++   +  G                F EA+    
Sbjct: 113 RLADARGVFAEM----PERDAVSWTVMVVGLNRAGR---------------FGEAIKTLL 153

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
            M A GF P  FT   VL +C       V +  H   +K      + VA ++L++Y K G
Sbjct: 154 DMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCG 213

Query: 292 EISNARRIFEEMP-------------------------------KKDVIPWSFMIARYAQ 320
           +   A  +FE MP                                + ++ W+ MIA Y Q
Sbjct: 214 DAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQ 273

Query: 321 TDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVF 379
             L   A++LF RM  ++ +AP++FT  SVL ACA +  + +G Q+H+ ++R  +  +  
Sbjct: 274 NGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQ 333

Query: 380 VSNALMDVYAKCGRMENSV---------------------------------ELFAESPK 406
           V+NAL+  YAK G +EN+                                  E+F     
Sbjct: 334 VTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNN 393

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
           R+ V W  MIVGY Q G   +A+ +F  M+         T ++VL  CASLA L+ G Q+
Sbjct: 394 RDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQI 453

Query: 467 HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE--VSWNAMISGYSMHG 524
           HC  +++  +    V+NA+I MYA+ GS   AR +FD +  W +  ++W +MI   + HG
Sbjct: 454 HCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVC-WRKETITWTSMIVALAQHG 512

Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY 584
              E + +F+ M + G  P+ +T+VGVLSACS+ G + +G+ Y+  +   + I P + HY
Sbjct: 513 QGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHY 572

Query: 585 TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEP 644
             MV LL RAG   +A + I  +P +P  + W +LL AC +H N E+  L+A+ +L  +P
Sbjct: 573 ACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDP 632

Query: 645 EDEATHVLLSNIYAM-------ARSW----EKAASKEPGLSWIENQGMVHYFRAGDTSHA 693
            +   +  ++N+Y+        AR W    EKA  KE G SW   +  +H F A D  H 
Sbjct: 633 NNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHP 692

Query: 694 DMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPS 753
             + +  M   +  + + AG++PDL +VL DV ++ KE  L  HSEKLA+AF L   P  
Sbjct: 693 QRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEK 752

Query: 754 SPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           + +R++KNLR+C DCH AIK ISK+  REII+RD  RFHHF+DG CSC D+W
Sbjct: 753 TTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 70/313 (22%), Positives = 130/313 (41%), Gaps = 31/313 (9%)

Query: 28  LSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGN 87
           LSA A L   +        I  +   +NS      + +  ++  ++ A  I  Q ++   
Sbjct: 304 LSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETD- 362

Query: 88  CLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFST 147
            L++ +   LL  YVK+  +  A ++F  M  R+ +++   I GY  + +  EA+ LF +
Sbjct: 363 -LNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRS 421

Query: 148 LHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGC 207
           +   G E N +   A L V  S+   +    +     +   + ++ V  A+I  ++  G 
Sbjct: 422 MITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGS 481

Query: 208 VEFARKVFDGLFNDCF--------------------EEALNFFSQMRAVGFKPNNFTFAF 247
             +AR++FD +   C+                    EEA+  F +M   G +P+  T+  
Sbjct: 482 FPWARRMFDQV---CWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVG 538

Query: 248 VLKACLGLDTIRVAKSAHG---CALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
           VL AC     +   K  +       +   EM  Y    ++DL  ++G  S A+     MP
Sbjct: 539 VLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHY--ACMVDLLARAGLFSEAQEFIRRMP 596

Query: 305 -KKDVIPWSFMIA 316
            + D I W  +++
Sbjct: 597 VEPDAIAWGSLLS 609


>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like, partial [Vitis vinifera]
          Length = 599

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 217/543 (39%), Positives = 320/543 (58%), Gaps = 19/543 (3%)

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
           E D++    +L  Y  + ++ +AR  F++MP KD   W+ MI+ ++Q  +   A ELF  
Sbjct: 65  EPDIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELFLV 124

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           M       N  ++ +++        LDL  Q+      V  +  V    A++  + K G+
Sbjct: 125 MP----VRNSVSWNAMISGYVESGDLDLAKQL----FEVAPVRSVVAWTAMITGFMKFGK 176

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           +E + + F E P +N VTWN MI GY++  +    + +F +M+E        + SSVL  
Sbjct: 177 IELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLG 236

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
           C++L+AL+ G QVH L  K+    ++    +L+ MY KCG + DA  +F +M   + V+W
Sbjct: 237 CSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTW 296

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA 573
           NAMISGY+ HG   + L +FD M+  G +P+ +TFV VLSAC++ G ++ G  YF SMV 
Sbjct: 297 NAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVR 356

Query: 574 NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGR 633
           +YG+E   +HYT +V LLGR G L +A  LI+ +PF+P   I+  LLGAC IH N+E+  
Sbjct: 357 DYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMPFKPHSAIFGTLLGACRIHKNLELAE 416

Query: 634 LSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMV 682
            +A+++L+ +PE  A +V L+N+YA    W+  A            K PG SWIE + +V
Sbjct: 417 FAAKNLLNLDPESAAGYVQLANVYAAMNRWDHVAMVRRSMKDNKVIKTPGYSWIEVKSVV 476

Query: 683 HYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLA 742
           H FR+GD  H ++  I   L  L  K R AGY+PDL   L DV E++K++ L  HSEKLA
Sbjct: 477 HEFRSGDRIHPELAFIHEKLNELERKMRLAGYVPDLEYALHDVGEEQKKQILLRHSEKLA 536

Query: 743 LAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCG 802
           +A+ L +MP  +PIR+ KNLR+C DCH+A K IS I  R II+RD  RFHHF+ G CSCG
Sbjct: 537 IAYGLIRMPLGTPIRVFKNLRVCGDCHSATKYISAIEGRVIIVRDTTRFHHFRQGECSCG 596

Query: 803 DFW 805
           D+W
Sbjct: 597 DYW 599



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 162/337 (48%), Gaps = 25/337 (7%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D+F+ N++L  Y+    +  A   FD+MP ++T S+ T I G++ +    +A  LF  + 
Sbjct: 67  DIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELFLVMP 126

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
                 N  ++ A +   V  G  +L   +F    ++    +    TA+I  F   G +E
Sbjct: 127 VR----NSVSWNAMISGYVESGDLDLAKQLF----EVAPVRSVVAWTAMITGFMKFGKIE 178

Query: 210 FARKVFD---------------GLFNDC-FEEALNFFSQMRAVGFKPNNFTFAFVLKACL 253
            A K F+               G   +C  E  L  F +M   GF+PN  + + VL  C 
Sbjct: 179 LAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCS 238

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSF 313
            L  +++ K  H    K+    ++    +LL +Y K G++ +A ++F  MP+KDV+ W+ 
Sbjct: 239 NLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNA 298

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ-IHSLVVRV 372
           MI+ YAQ      A+ LF +MR   + P+  TFV+VL AC     +DLG +  +S+V   
Sbjct: 299 MISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDY 358

Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNH 409
           G+ +       ++D+  + G++  +V+L  + P + H
Sbjct: 359 GVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMPFKPH 395



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/262 (21%), Positives = 115/262 (43%), Gaps = 58/262 (22%)

Query: 376 SDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKM 435
           S+V  SN ++  + + G + +++ +F     +  VTWN+M+ GY       +  I  ++ 
Sbjct: 3   SNVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNR----RGKIKVARQ 58

Query: 436 LEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSI 495
           L +++P  ++   +++ AC                                  Y     +
Sbjct: 59  LFDRIPEPDIFSYNIMLAC----------------------------------YLHNADV 84

Query: 496 TDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSAC 555
             ARL FD M   +  SWN MISG+S +G+  +  ++F +M  R    N++++  ++S  
Sbjct: 85  ESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELFLVMPVR----NSVSWNAMISGY 140

Query: 556 SNGGLLEQGEAYF-----KSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQ 610
              G L+  +  F     +S+VA          +T+M++   + G ++ A K  E +P +
Sbjct: 141 VESGDLDLAKQLFEVAPVRSVVA----------WTAMITGFMKFGKIELAEKYFEEMPMK 190

Query: 611 PSVMIWRALLGACIIHNNVEIG 632
            +++ W A++   I +   E G
Sbjct: 191 -NLVTWNAMIAGYIENCQAENG 211



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 19/199 (9%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  S ++ L  C     L+    +H  + K     ++ A   LL++Y K   L DA KLF
Sbjct: 226 NPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLF 285

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             MP+++ +++   I GY       +A+ LF  +  EG + +   F A L      G+ +
Sbjct: 286 LVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVD 345

Query: 175 LCPCVF-ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQM 233
           L    F + V   G ++     T ++D     G +                EA++   +M
Sbjct: 346 LGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKL---------------VEAVDLIKKM 390

Query: 234 RAVGFKPNNFTFAFVLKAC 252
               FKP++  F  +L AC
Sbjct: 391 ---PFKPHSAIFGTLLGAC 406



 Score = 45.8 bits (107), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 34/157 (21%), Positives = 76/157 (48%), Gaps = 11/157 (7%)

Query: 478 DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK-VFDLM 536
           +V+ +N +I  + + G +  A  VF+ M     V+WN+M++GYS      +V + +FD +
Sbjct: 4   NVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRI 63

Query: 537 QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGH 596
            +    P+  ++  +L+   +   +E    +F  M            + +M+S   + G 
Sbjct: 64  PE----PDIFSYNIMLACYLHNADVESARLFFDQMPVK-----DTASWNTMISGFSQNGM 114

Query: 597 LDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGR 633
           +D+A +L   +P + SV  W A++   +   ++++ +
Sbjct: 115 MDQARELFLVMPVRNSVS-WNAMISGYVESGDLDLAK 150


>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
 gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
          Length = 916

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 262/755 (34%), Positives = 395/755 (52%), Gaps = 42/755 (5%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVE-AVGLFSTL 148
           DLF    LL+ Y K   +  A ++F  +   + I +   I     + +  + A+ L   +
Sbjct: 165 DLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRM 224

Query: 149 HREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCV 208
             EG   N  +F A L          L   + A V +LG   +  V TAL+  +  CG V
Sbjct: 225 WLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSV 284

Query: 209 EFARKVFDGL--------------FNDCFEEALNF--FSQMRAVGFKPNNFTFAFVLKAC 252
           + +  VF+ +              F  C   +  F  + +M+  GF+PN  TF   LKA 
Sbjct: 285 DESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAA 344

Query: 253 LGLDTIRVAKSA--HGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIP 310
               +  + +SA  HG       E D+ V  AL+ +Y  +G I  AR  F+ +P K+++ 
Sbjct: 345 CSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVS 404

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV 370
           W+ M+  Y     + +A+ELF  M++  +APN+ ++++VL  C   E +     IH+ VV
Sbjct: 405 WNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCC---EDVSEARSIHAEVV 461

Query: 371 RVGLLS-DVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAM 429
             GL + +  ++N ++ ++A+ G +E ++  F  +  ++ V+WNT +       ++  A+
Sbjct: 462 GNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAALSAREDLHGAI 521

Query: 430 IMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHC-LTVKANYDMDVVVANALIDM 488
             F  M  E     + T  SV+  CA L  LE G  +   L+     + DVVV +A+++M
Sbjct: 522 TAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVESAVMNM 581

Query: 489 YAKCGSITDA--RLVFDMMNDWNE-VSWNAMISGYSMHGLSAEVLKVFDLMQQRGW-RPN 544
            AKCGS  D   RL   M +D  + V+WN MI+ Y+ HG   + LK+F +MQQR   RP+
Sbjct: 582 VAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPD 641

Query: 545 NLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP-CIEHYTSMVSLLGRAGHLDKAAKL 603
           + TFV VLS CS+ GL+E G   F       GIE   +EHY  +V +LGR G+L +A   
Sbjct: 642 SSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAEDF 701

Query: 604 IEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW 663
           I  +P     ++W +LLGAC  + ++E G  +A+  ++    D   +V+LSNIYA A  W
Sbjct: 702 IRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGYVVLSNIYAAAGRW 761

Query: 664 E------------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRK 711
           E            +   + PG S I  +  VH F A D SH   + I   LE L    R+
Sbjct: 762 EDSIRVREDMAERRVKKRAPGKSSIVVKNRVHEFFARDRSHPQSDEIYAELERLKGLIRE 821

Query: 712 AGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTA 771
           AGY+PD   VL DV E++KE+ LW HSEKLA+AF L  +P    IR+IKNLR+C DCHTA
Sbjct: 822 AGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISVPHRHSIRVIKNLRVCKDCHTA 881

Query: 772 IKIISKIVQREIIIRDVHRFHHF-QDGCCSCGDFW 805
            K I+++ QREI +RD +RFHHF +DG CSCGD+W
Sbjct: 882 TKFIARVTQREIAVRDCNRFHHFGKDGECSCGDYW 916



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 153/600 (25%), Positives = 272/600 (45%), Gaps = 43/600 (7%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L+ CI + DL     +H Q++K+G   +    N L+ +Y K   L DA   F  +  R  
Sbjct: 31  LRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSALRSRGI 90

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
            ++ T I   +  +   +         R  +  N     A L  + S             
Sbjct: 91  ATWNTLIAAQSSPAAVFDLYTRMKLEERAENRPNRLTIIAVLGAIASGD--PSSSSSSRA 148

Query: 183 VYKLGHDS--------NAFVGTALIDAFSVCGCVEFARKVFDGL---------------- 218
             ++ HD         + FV TAL+DA+  CGCVE A +VF  +                
Sbjct: 149 QARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACA 208

Query: 219 -FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
             ++  + AL    +M   G  PN  +F  +L +C    ++ +A+S H    +  +  D+
Sbjct: 209 GNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDV 268

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
            VA AL+ +Y + G +  +  +FE M  ++ + W+ MIA +AQ      A  ++ RM+Q 
Sbjct: 269 VVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQE 328

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQ--IHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
              PN+ TFV+ L+A  +    DLG    +H  +   GL  DV V  AL+ +Y   G ++
Sbjct: 329 GFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAID 388

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
            +   F   P +N V+WN M+  Y   G   +AM +F+ M  + +   +V+Y +VL  C 
Sbjct: 389 RARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCE 448

Query: 456 SLAALEPGMQVHCLTVKAN-YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
            ++       +H   V    +  +  +AN ++ M+A+ GS+ +A   FD     + VSWN
Sbjct: 449 DVS---EARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWN 505

Query: 515 AMISGYS----MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKS 570
             ++  S    +HG     +  F  MQ  G+RP+  T V V+  C++ G LE G +  + 
Sbjct: 506 TKVAALSAREDLHG----AITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQ 561

Query: 571 MVANYGIEPCIEHYTSMVSLLGRAG-HLDKAAKLIEGIP-FQPSVMIWRALLGACIIHNN 628
           + A   +E  +   +++++++ + G  +D+  +L   +P  +  ++ W  ++ A   H +
Sbjct: 562 LSAAIEVERDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGH 621



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 128/502 (25%), Positives = 216/502 (43%), Gaps = 40/502 (7%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  S+   L SC  +  L  A +IH +V + G   D+     L+ +Y +   + ++  +F
Sbjct: 232 NRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVF 291

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           + M  RN +S+   I  +        A  ++  + +EG   N   F   LK   S    +
Sbjct: 292 EAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQD 351

Query: 175 LCPCV-----FACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------- 218
           L          AC    G + +  VGTAL+  +   G ++ AR  FD +           
Sbjct: 352 LGESAALHGWIACA---GLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAM 408

Query: 219 -----FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT-C 272
                 N    EA+  F+ M+     PN  ++  VL  C   + +  A+S H   +    
Sbjct: 409 LTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCC---EDVSEARSIHAEVVGNGL 465

Query: 273 YEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFC 332
           +  +  +A  ++ ++ +SG +  A   F+    KD + W+  +A  +  +    A+  F 
Sbjct: 466 FAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFY 525

Query: 333 RMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI-HSLVVRVGLLSDVFVSNALMDVYAKC 391
            M+     P++FT VSV+  CA +  L+LG  I   L   + +  DV V +A+M++ AKC
Sbjct: 526 TMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVESAVMNMVAKC 585

Query: 392 GRMENSVE-LFAESP--KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE-QVPATEVTY 447
           G   +  E LFA  P  +++ V WNTMI  Y Q G   KA+ +F  M +   V     T+
Sbjct: 586 GSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTF 645

Query: 448 SSVLRACASLAALEPGMQVHCL----TVKANYDMDVVVANALIDMYAKCGSITDAR-LVF 502
            SVL  C+    +E G  +HC      V       V     L+D+  + G + +A   + 
Sbjct: 646 VSVLSGCSHAGLVEDG--IHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAEDFIR 703

Query: 503 DMMNDWNEVSWNAMISGYSMHG 524
            M    + V W +++   S +G
Sbjct: 704 KMPLPADSVVWTSLLGACSSYG 725



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 130/288 (45%), Gaps = 15/288 (5%)

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           T   +L+ C     L  G Q+H  +V+ GL  +  + N L+ +Y+KC  ++++   F+  
Sbjct: 26  TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
             R   TWNT+I        V     ++++M  E+         +++    ++A+ +P  
Sbjct: 86  RSRGIATWNTLIAAQSSPAAV---FDLYTRMKLEERAENRPNRLTIIAVLGAIASGDPSS 142

Query: 465 Q---------VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
                     VH     ++ + D+ VA AL+D Y KCG +  A  VF  +   + + WNA
Sbjct: 143 SSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNA 202

Query: 516 MISGYSMHGLSAE-VLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
            I   + +    +  L +   M   G  PN  +FV +LS+C +   L    +   + V  
Sbjct: 203 AIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARS-IHARVEE 261

Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
            G    +   T++V++ GR G +D++  + E +  +  V  W A++ A
Sbjct: 262 LGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVS-WNAMIAA 308



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 6/183 (3%)

Query: 446 TYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMM 505
           T + +LR C   A L  G Q+H   VK     + ++ N L+ MY+KC S+ DA   F  +
Sbjct: 26  TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85

Query: 506 NDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE 565
                 +WN +I+  S      ++     L ++   RPN LT + VL A ++G       
Sbjct: 86  RSRGIATWNTLIAAQSSPAAVFDLYTRMKLEERAENRPNRLTIIAVLGAIASGDPSSSSS 145

Query: 566 AYFKSMVANYGI-----EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
           +  ++ + +  I     E  +   T+++   G+ G ++ A ++   I   P ++ W A +
Sbjct: 146 SRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQV-PDLICWNAAI 204

Query: 621 GAC 623
            AC
Sbjct: 205 MAC 207


>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 804

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 262/832 (31%), Positives = 393/832 (47%), Gaps = 135/832 (16%)

Query: 56  SHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKL----NRLPDAT 111
           S  YA  LQ C    +      IH + +K G     +  N LL+ Y +       L DA 
Sbjct: 26  SDHYARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDAR 85

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
           +LFDE+P                             L R     N F + + L +    G
Sbjct: 86  RLFDEIP-----------------------------LARR----NVFTWNSLLSMFAKSG 112

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFS 231
                  VFA +     + +A   T ++   +  G                F EA+    
Sbjct: 113 RLADARGVFAEM----PERDAVSWTVMVVGLNRAGR---------------FGEAIKTLL 153

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
            M A GF P  FT   VL +C       V +  H   +K      + VA ++L++Y K G
Sbjct: 154 DMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCG 213

Query: 292 EISNARRIFEEMP-------------------------------KKDVIPWSFMIARYAQ 320
           +   A  +FE MP                                + ++ W+ MIA Y Q
Sbjct: 214 DSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQ 273

Query: 321 TDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVF 379
             L   A++LF RM  ++ +AP++FT  SVL ACA +  + +G Q+H+ ++R  +  +  
Sbjct: 274 NGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQ 333

Query: 380 VSNALMDVYAKCGRMENSV---------------------------------ELFAESPK 406
           V+NAL+  YAK G +EN+                                  E+F     
Sbjct: 334 VTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNN 393

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
           R+ V W  MIVGY Q G   +A+ +F  M+         T ++VL  CASLA L+ G Q+
Sbjct: 394 RDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQI 453

Query: 467 HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE--VSWNAMISGYSMHG 524
           HC  +++  +    V+NA+I MYA+ GS   AR +FD +  W +  ++W +MI   + HG
Sbjct: 454 HCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVC-WRKETITWTSMIVALAQHG 512

Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY 584
              E + +F+ M + G  P+ +T+VGVLSACS+ G + +G+ Y+  +   + I P + HY
Sbjct: 513 QGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHY 572

Query: 585 TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEP 644
             MV LL RAG   +A + I  +P +P  + W +LL AC +H N E+  L+A+ +L  +P
Sbjct: 573 ACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDP 632

Query: 645 EDEATHVLLSNIYAM-------ARSW----EKAASKEPGLSWIENQGMVHYFRAGDTSHA 693
            +   +  ++N+Y+        AR W    EKA  KE G SW   +  +H F A D  H 
Sbjct: 633 NNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHP 692

Query: 694 DMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPS 753
             + +  M   +  + + AG++PDL +VL DV ++ KE  L  HSEKLA+AF L   P  
Sbjct: 693 QRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEK 752

Query: 754 SPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           + +R++KNLR+C DCH AIK ISK+  REII+RD  RFHHF+DG CSC D+W
Sbjct: 753 TTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 70/313 (22%), Positives = 130/313 (41%), Gaps = 31/313 (9%)

Query: 28  LSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGN 87
           LSA A L   +        I  +   +NS      + +  ++  ++ A  I  Q ++   
Sbjct: 304 LSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETD- 362

Query: 88  CLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFST 147
            L++ +   LL  YVK+  +  A ++F  M  R+ +++   I GY  + +  EA+ LF +
Sbjct: 363 -LNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRS 421

Query: 148 LHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGC 207
           +   G E N +   A L V  S+   +    +     +   + ++ V  A+I  ++  G 
Sbjct: 422 MITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGS 481

Query: 208 VEFARKVFDGLFNDCF--------------------EEALNFFSQMRAVGFKPNNFTFAF 247
             +AR++FD +   C+                    EEA+  F +M   G +P+  T+  
Sbjct: 482 FPWARRMFDQV---CWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVG 538

Query: 248 VLKACLGLDTIRVAKSAHG---CALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
           VL AC     +   K  +       +   EM  Y    ++DL  ++G  S A+     MP
Sbjct: 539 VLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHY--ACMVDLLARAGLFSEAQEFIRRMP 596

Query: 305 -KKDVIPWSFMIA 316
            + D I W  +++
Sbjct: 597 VEPDAIAWGSLLS 609


>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
 gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
          Length = 562

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 215/538 (39%), Positives = 309/538 (57%), Gaps = 14/538 (2%)

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ-AFVA 340
            L+ +Y K G +  AR IF  + ++ V+ WS MI  YA      +A+ LF RMR    V 
Sbjct: 25  GLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYALHGRGQEALLLFHRMRNDGRVE 84

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLL--SDVFVSNALMDVYAKCGRMENSV 398
           PN  TF  V  AC  +E L+ G +IH+L +  G L  S+  + NAL+++Y +CG +E + 
Sbjct: 85  PNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSSNAILENALLNMYVRCGSLEEAR 144

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
           ++F      +  +W +MI    +  E+ +A+ +F +M  E +P T VT +SVL ACA   
Sbjct: 145 KVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMNLEGIPPTSVTLASVLNACACSG 204

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           AL+ G Q+H     + +   V+   AL+DMYAKCGS+  +  VF  M   N VSW AMI+
Sbjct: 205 ALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMIA 264

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
             + HG   E L++F  M   G   +  TF+ VL ACS+ GL+++   +F SMV +Y I 
Sbjct: 265 ALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSHAGLIKESLEFFHSMVEDYAIA 324

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P   HY   +  +GRAG L  A +LI  +PF P  + W+ LL AC IH+  E     A+ 
Sbjct: 325 PTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETLTWKTLLNACRIHSQAERATKVAEL 384

Query: 639 ILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRA 687
           +    PED   + LL N+YA    +           ++   K PG S+IE +  VH F A
Sbjct: 385 LSKLAPEDSMAYTLLGNVYAATGRYGDQMRVRKGMTDRGLKKVPGKSFIEVKNKVHEFVA 444

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFAL 747
           GD +H   + I   LE L  + R+AGY+P+   VL  V E+EKE+ + +HSEKLA+AF L
Sbjct: 445 GDRAHPSRDEILLELEKLGGRMREAGYVPNTKDVLHAVNEEEKEQLIGLHSEKLAIAFGL 504

Query: 748 FKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
              PP +P+ I+KNLR+C DCH A K+I+KI++R I++RD HRFHHF+DG CSC D+W
Sbjct: 505 IATPPGTPLLIVKNLRVCSDCHAATKVIAKIMRRRIVVRDTHRFHHFEDGQCSCKDYW 562



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 174/369 (47%), Gaps = 33/369 (8%)

Query: 197 ALIDAFSVCGCVEFARKVFDGLFNDCF----------------EEALNFFSQMRAVG-FK 239
            L+  ++ CGC++ AR +F+G+                     +EAL  F +MR  G  +
Sbjct: 25  GLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYALHGRGQEALLLFHRMRNDGRVE 84

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV---ALLDLYTKSGEISNA 296
           PN  TF  V  AC  ++ +   +  H  A+ +  E+    A+   ALL++Y + G +  A
Sbjct: 85  PNAMTFTGVFNACGVIEDLEQGREIHALAMAS-GELKSSNAILENALLNMYVRCGSLEEA 143

Query: 297 RRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM 356
           R++F+ M   D   W+ MI    +    ++A+ELF RM    + P   T  SVL ACA  
Sbjct: 144 RKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMNLEGIPPTSVTLASVLNACACS 203

Query: 357 EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMI 416
             L +G QIHS +   G  S V    AL+D+YAKCG +E S ++F     RN V+W  MI
Sbjct: 204 GALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMI 263

Query: 417 VGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD 476
               Q G+  +A+ +F +M  E + A   T+  VLRAC+    ++  ++     V+    
Sbjct: 264 AALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSHAGLIKESLEFFHSMVE---- 319

Query: 477 MDVVVANA------LIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHGLSAEV 529
            D  +A         +D   + G + DA  L+  M      ++W  +++   +H  +   
Sbjct: 320 -DYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETLTWKTLLNACRIHSQAERA 378

Query: 530 LKVFDLMQQ 538
            KV +L+ +
Sbjct: 379 TKVAELLSK 387



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 143/273 (52%), Gaps = 5/273 (1%)

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           ++ G +IHS +   G        N L+ +YAKCG ++ +  +F    +R  V+W+ MI  
Sbjct: 1   MEEGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGA 60

Query: 419 YVQLGEVGKAMIMFSKMLEE-QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN--Y 475
           Y   G   +A+++F +M  + +V    +T++ V  AC  +  LE G ++H L + +    
Sbjct: 61  YALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELK 120

Query: 476 DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDL 535
             + ++ NAL++MY +CGS+ +AR VFD M+  +  SW +MI+  + +    E L++F  
Sbjct: 121 SSNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHR 180

Query: 536 MQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAG 595
           M   G  P ++T   VL+AC+  G L+ G+     + A+ G    +   T+++ +  + G
Sbjct: 181 MNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDAS-GFHSSVLAQTALLDMYAKCG 239

Query: 596 HLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
            L+ ++K+   +  + SV  W A++ A   H  
Sbjct: 240 SLECSSKVFTAMETRNSVS-WTAMIAALAQHGQ 271



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 154/349 (44%), Gaps = 27/349 (7%)

Query: 92  FATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHRE 151
            A N L+++Y K   L +A  +F+ + ER  +S+   I  Y +  +  EA+ LF  +  +
Sbjct: 21  IAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYALHGRGQEALLLFHRMRND 80

Query: 152 GH-ELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGH--DSNAFVGTALIDAFSVCGCV 208
           G  E N   FT        +   E    + A     G    SNA +  AL++ +  CG +
Sbjct: 81  GRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSSNAILENALLNMYVRCGSL 140

Query: 209 EFARKVFD-----------GLFNDCFE-----EALNFFSQMRAVGFKPNNFTFAFVLKAC 252
           E ARKVFD            +   C E     EAL  F +M   G  P + T A VL AC
Sbjct: 141 EEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMNLEGIPPTSVTLASVLNAC 200

Query: 253 LGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWS 312
                ++V K  H     + +   +    ALLD+Y K G +  + ++F  M  ++ + W+
Sbjct: 201 ACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETRNSVSWT 260

Query: 313 FMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA----TMEGLDLGNQIHSL 368
            MIA  AQ     +A+ELF  M    +  +  TF+ VL+AC+      E L+     HS+
Sbjct: 261 AMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSHAGLIKESLEF---FHSM 317

Query: 369 VVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMI 416
           V    +          +D   + GR++++ EL    P     +TW T++
Sbjct: 318 VEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETLTWKTLL 366



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/312 (22%), Positives = 129/312 (41%), Gaps = 37/312 (11%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKG--NCLDLFATNVLLNVYVKLNRLPDA 110
           E N+ ++     +C   +DL+    IH   +  G     +    N LLN+YV+   L +A
Sbjct: 84  EPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSSNAILENALLNMYVRCGSLEEA 143

Query: 111 TKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSM 170
            K+FD M   +  S+ + I   T + + +EA+ LF  ++ EG         + L      
Sbjct: 144 RKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMNLEGIPPTSVTLASVLNACACS 203

Query: 171 GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------- 219
           G  ++   + + +   G  S+    TAL+D ++ CG +E + KVF  +            
Sbjct: 204 GALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMI 263

Query: 220 -----NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
                +   +EAL  F +M   G   +  TF  VL+AC     I+        +L+  + 
Sbjct: 264 AALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSHAGLIKE-------SLEFFHS 316

Query: 275 MDLYVAVA--------LLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIAR---YAQTD 322
           M    A+A         LD   ++G + +A  +   MP   + + W  ++     ++Q +
Sbjct: 317 MVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETLTWKTLLNACRIHSQAE 376

Query: 323 LSIDAVELFCRM 334
            +    EL  ++
Sbjct: 377 RATKVAELLSKL 388


>gi|413954823|gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
          Length = 610

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 209/567 (36%), Positives = 337/567 (59%), Gaps = 14/567 (2%)

Query: 252 CLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPW 311
           C+G   +R  +  H   +   Y   LY+A  L+ +Y + G + +A  + + MP+++V+ W
Sbjct: 45  CVGRRALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMPERNVVSW 104

Query: 312 SFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN--QIHSLV 369
           + MI+ Y+Q +   +A +LF  M +A   PN+FT  SVL +C   +G+      Q+H+  
Sbjct: 105 TAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQIKQVHAFA 164

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAM 429
           ++      +FV ++L+D+YA+   ++ +  +F   P R+ V++ T++ GY +LG   +A+
Sbjct: 165 IKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRLGLDEEAL 224

Query: 430 IMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMY 489
            +F ++  E +   +VT+S +L A + L++++ G QVH L ++      + + N+LIDMY
Sbjct: 225 NLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMY 284

Query: 490 AKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFV 549
           +KCG +  +R VFD M + + VSWNAM+ GY  HG++ EV+++F  M  +  +P+++T +
Sbjct: 285 SKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFMCDK-VKPDSVTLL 343

Query: 550 GVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF 609
            VL   S+GGL+++G   F  +V         +HY  ++ LLGR+G L+KA  LI+ +PF
Sbjct: 344 AVLLGYSHGGLVDEGLDMFDHIVKEQSTLLNTQHYGCVIDLLGRSGQLEKALLLIQKMPF 403

Query: 610 QPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE----- 664
           QP+  IW +LLGAC +H NV +G   AQ + D EPE+   +V+LSNIYA AR W+     
Sbjct: 404 QPTRAIWGSLLGACRVHANVHVGEFVAQKLFDIEPENAGNYVILSNIYAAARMWKDVFRL 463

Query: 665 ------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDL 718
                 K   KEPG SW+    ++H F + +  H     I   +  +    + AG++PDL
Sbjct: 464 RKLMLKKTVIKEPGRSWMILDKVIHTFHSSERFHPRKEDINVKINEIYAAIKAAGFVPDL 523

Query: 719 SAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKI 778
           S VL DV +++KER L  HSEKLA+ F L   P    I+++KNLRICVDCH   K +SK+
Sbjct: 524 SCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCHNFAKFVSKV 583

Query: 779 VQREIIIRDVHRFHHFQDGCCSCGDFW 805
             REI +RD +RFH   +G C+CGD+W
Sbjct: 584 YGREISLRDKNRFHLITEGACTCGDYW 610



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 186/385 (48%), Gaps = 31/385 (8%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
           H Y  ++  C+    L+    +H +++  G    L+    L+ +Y +   L DA  + D 
Sbjct: 36  HDYDAAITECVGRRALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDG 95

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLV-SMGWAE- 174
           MPERN +S+   I GY+ + +  EA  LF  + R G E N F   + L     S G  + 
Sbjct: 96  MPERNVVSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQH 155

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-FNDCF---------- 223
               V A   K   + + FVG++L+D ++    ++ AR+VFD L   D            
Sbjct: 156 QIKQVHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYT 215

Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                EEALN F Q+   G + N  TF+ +L A  GL ++   K  HG  L+   E+  +
Sbjct: 216 RLGLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRR--ELPFF 273

Query: 279 VAV--ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           +A+  +L+D+Y+K G++  +RR+F+ MP++ V+ W+ M+  Y +  ++ + V+LF R   
Sbjct: 274 MALQNSLIDMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLF-RFMC 332

Query: 337 AFVAPNQFTFVSVL----QACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCG 392
             V P+  T ++VL          EGLD+ + I   V     L +      ++D+  + G
Sbjct: 333 DKVKPDSVTLLAVLLGYSHGGLVDEGLDMFDHI---VKEQSTLLNTQHYGCVIDLLGRSG 389

Query: 393 RMENSVELFAESP-KRNHVTWNTMI 416
           ++E ++ L  + P +     W +++
Sbjct: 390 QLEKALLLIQKMPFQPTRAIWGSLL 414



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 144/277 (51%), Gaps = 4/277 (1%)

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           + + +  C     L  G Q+H+ +V  G    ++++  L+ +YA+CG +E++  +    P
Sbjct: 38  YDAAITECVGRRALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMP 97

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM- 464
           +RN V+W  MI GY Q     +A  +F  ML       E T +SVL +C     +     
Sbjct: 98  ERNVVSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQI 157

Query: 465 -QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMH 523
            QVH   +K N+++ + V ++L+DMYA+  +I +AR VFDM+   + VS+  ++SGY+  
Sbjct: 158 KQVHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRL 217

Query: 524 GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEH 583
           GL  E L +F  +   G + N +TF  +L+A S    ++ G+     ++    +   +  
Sbjct: 218 GLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQ-VHGLILRRELPFFMAL 276

Query: 584 YTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
             S++ +  + G L  + ++ + +P + SV+ W A+L
Sbjct: 277 QNSLIDMYSKCGKLLYSRRVFDNMP-ERSVVSWNAML 312


>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
 gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
          Length = 720

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 238/653 (36%), Positives = 362/653 (55%), Gaps = 37/653 (5%)

Query: 188 HDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCFE---------EALNFFS 231
           H+ N F   ALI A++    +  A  +FD +       FN              AL+ F 
Sbjct: 70  HEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFG 129

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
           +MR +G   + FTF+ V+ AC   + + + +  H  A  + ++  + V  +LL  Y+K+G
Sbjct: 130 EMREMGLVMDGFTFSGVITACC--NHVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNG 187

Query: 292 EISNARRIFEEMPK--KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSV 349
            +  A  +F  M +  +D + W+ MI  Y Q    + A+ L+  M       + FT  SV
Sbjct: 188 ILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASV 247

Query: 350 LQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR-MENSVELFAESPKRN 408
           L   + +E L  G Q H+  ++ G   +  V + L+D+YAKCG  M  S ++F E    +
Sbjct: 248 LTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSD 307

Query: 409 HVTWNTMIVGYVQLGEVG-KAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVH 467
            V WNTMI GY Q  E+  +A+  F +M        + ++   + AC++L++   G Q H
Sbjct: 308 LVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFH 367

Query: 468 CLTVKANYDMD-VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLS 526
            L +K+    + + V NAL+ MY+KCG++ DAR +F  M   N V+ N++I+GY+ HG+ 
Sbjct: 368 ALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIG 427

Query: 527 AEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTS 586
            E L +F+ M      P ++T V +LSAC++ G +E+G+ YF  M   +GIEP  EHY+ 
Sbjct: 428 TESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSC 487

Query: 587 MVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPED 646
           M+ LLGRAG L +A +LI+ +PF P    W ALLGAC  + N+E+   +A   L  EP +
Sbjct: 488 MIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTN 547

Query: 647 EATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADM 695
              +++L+++Y+ AR WE+AA            K+PG SWIE    VH F A D SH  +
Sbjct: 548 AVPYIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHPRI 607

Query: 696 NIIRGMLEWLNMKSRKAGYIPDLS-AVLRD--VREDEKERYLWVHSEKLALAFALFKMPP 752
             I   L+ + +K ++AGY+PD+  A ++D    E EKE  L  HSEKLA+AF L     
Sbjct: 608 KEIHMYLDEMFVKMKRAGYVPDVRWAFVKDDETGEQEKEIMLAHHSEKLAVAFGLLFTKH 667

Query: 753 SSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
             P+ ++KNLRIC DCH AIK +S I +R+I +RD +RFH F+DG CSCGD+W
Sbjct: 668 GEPLLVVKNLRICGDCHNAIKFMSAIARRKITVRDAYRFHCFEDGRCSCGDYW 720



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 140/522 (26%), Positives = 251/522 (48%), Gaps = 56/522 (10%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLK------------------KGNCL--------- 89
            S+   L+SCI N DL T  ++H   LK                  K N L         
Sbjct: 9   QSFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQ 68

Query: 90  ----DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLF 145
               ++F+ N L+  Y K + +  A  LFD++P+ + +SF T I  Y      + A+ LF
Sbjct: 69  THEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLF 128

Query: 146 STLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVC 205
             +   G  ++ F F+  +    +     L   + +  +  G DS   V  +L+  +S  
Sbjct: 129 GEMREMGLVMDGFTFSGVITACCNH--VGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKN 186

Query: 206 GCVEFARKVFDGLFNDCFEE------------------ALNFFSQMRAVGFKPNNFTFAF 247
           G +E A  VF+G+  +  +E                  AL  +  M   GF+ + FT A 
Sbjct: 187 GILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLAS 246

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE-ISNARRIFEEMPKK 306
           VL     ++ +      H  A+KT +  + +V   L+D+Y K G  +S +R++FEE+   
Sbjct: 247 VLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGS 306

Query: 307 DVIPWSFMIARYAQT-DLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
           D++ W+ MI+ Y+Q  +LS++A+E F +M++A   P+  +FV  + AC+ +     G Q 
Sbjct: 307 DLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQF 366

Query: 366 HSLVVRVGLLSD-VFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
           H+L ++  + S+ + V+NAL+ +Y+KCG ++++ +LF   P+ N VT N++I GY Q G 
Sbjct: 367 HALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGI 426

Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA-NYDMDVVVAN 483
             +++ +F +ML   +  T +T  S+L ACA    +E G +   +       + +    +
Sbjct: 427 GTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYS 486

Query: 484 ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHG 524
            +ID+  + G +++A RL+  M       +W A++     +G
Sbjct: 487 CMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYG 528



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 113/358 (31%), Positives = 190/358 (53%), Gaps = 6/358 (1%)

Query: 268 ALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDA 327
           A    +E +++   AL+  Y K   I  A  +F+++P+ D++ ++ +I  YA    ++ A
Sbjct: 65  AFNQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSA 124

Query: 328 VELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDV 387
           + LF  MR+  +  + FTF  V+ AC    GL    Q+HSL    G  S V V N+L+  
Sbjct: 125 LSLFGEMREMGLVMDGFTFSGVITACCNHVGLI--RQLHSLAFSSGFDSYVSVKNSLLTY 182

Query: 388 YAKCGRMENSVELFAESPK--RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEV 445
           Y+K G +E +  +F    +  R+ V+WN+MIV Y Q     KA+ ++  M+         
Sbjct: 183 YSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMF 242

Query: 446 TYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGS-ITDARLVFDM 504
           T +SVL   + +  L  G+Q H   +K  ++ +  V + LIDMYAKCG+ ++++R VF+ 
Sbjct: 243 TLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEE 302

Query: 505 MNDWNEVSWNAMISGYSMHG-LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQ 563
           +   + V WN MISGYS +  LS E L+ F  MQ+ G+ P++ +FV  +SACSN     Q
Sbjct: 303 ICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQ 362

Query: 564 GEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLG 621
           G+ +    + +      I    ++V++  + G+L  A KL + +P   +V +   + G
Sbjct: 363 GKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAG 420



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/201 (21%), Positives = 86/201 (42%), Gaps = 36/201 (17%)

Query: 439 QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDA 498
           Q   T  ++  +L++C +   L  G  +H + +K+       ++N  I +Y+KC  +T A
Sbjct: 3   QFSWTLQSFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTA 62

Query: 499 RLVFDMMNDWNEVSWNAMISGYSMHGL-------------------------------SA 527
              F+  ++ N  S+NA+I+ Y+   L                               + 
Sbjct: 63  HHAFNQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTL 122

Query: 528 EVLKVFDLMQQRGWRPNNLTFVGVLSACSNG-GLLEQGEAYFKSMVANYGIEPCIEHYTS 586
             L +F  M++ G   +  TF GV++AC N  GL+ Q      S+  + G +  +    S
Sbjct: 123 SALSLFGEMREMGLVMDGFTFSGVITACCNHVGLIRQ----LHSLAFSSGFDSYVSVKNS 178

Query: 587 MVSLLGRAGHLDKAAKLIEGI 607
           +++   + G L++A  +  G+
Sbjct: 179 LLTYYSKNGILEEAEMVFNGM 199



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 71/336 (21%), Positives = 125/336 (37%), Gaps = 44/336 (13%)

Query: 94  TNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGH 153
            N L+ +Y K   L DA KLF  MP+ NT++  + I GY       E++ LF  +     
Sbjct: 383 NNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASI 442

Query: 154 ELNPFAFTAFLKVLVSMGWAELCPCVFACVYKL-GHDSNAFVGTALIDAFSVCGCVEFAR 212
                   + L      G  E     F  +  + G +  A   + +ID     G +  A 
Sbjct: 443 APTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAE 502

Query: 213 KVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC 272
           ++ D                   + F P +  +A +L AC     + +A+ A    L+  
Sbjct: 503 RLID------------------TMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQL- 543

Query: 273 YEMDLYVAVALLDLYTKSGEISNARRIFEEM-----PKKDVIPWSFMIAR---YAQTDLS 324
              +    + L  +Y+ + +   A RI + M      KK    W  +  R   +   D S
Sbjct: 544 EPTNAVPYIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNS 603

Query: 325 IDAV--------ELFCRMRQAFVAPN-QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLL 375
              +        E+F +M++A   P+ ++ FV   +     + + L +    L V  GLL
Sbjct: 604 HPRIKEIHMYLDEMFVKMKRAGYVPDVRWAFVKDDETGEQEKEIMLAHHSEKLAVAFGLL 663

Query: 376 SDVFVSNALMDVYAK----CGRMENSVELFAESPKR 407
              F  +    +  K    CG   N+++  +   +R
Sbjct: 664 ---FTKHGEPLLVVKNLRICGDCHNAIKFMSAIARR 696


>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Vitis vinifera]
          Length = 913

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 271/899 (30%), Positives = 429/899 (47%), Gaps = 140/899 (15%)

Query: 43  TTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLK---KGNCLDLFATNVLLN 99
           T  PI    S+    S+++   + I +  L +   +H Q++K   K N  D  A N L++
Sbjct: 19  THKPIKTPTSKLYLDSHSSDDSNVITS--LTSVKMMHAQMIKLPQKWNP-DAAAKN-LIS 74

Query: 100 VYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAV-GLFSTLHREGHELNPF 158
            Y+       A  +F     RN + + + ++ +  S+  +  V  +F  LH +G   +  
Sbjct: 75  SYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSE 134

Query: 159 AFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL 218
            ++  LK    +    L   +  C+ K G D + ++  AL++ +  C  +E A +VF  +
Sbjct: 135 VYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEM 194

Query: 219 FN----------------DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAK 262
            N                +  ++ +  F +M+    K    T   VL+AC  +  +  AK
Sbjct: 195 PNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAK 254

Query: 263 SAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYA--- 319
             HG   +   + D+ +   L+ +Y+K+G++  ARR+F+ M  ++   W+ MI+ YA   
Sbjct: 255 QIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALG 314

Query: 320 -------------QTDLSIDAVELFC-------------------RMRQAFVAPNQFTFV 347
                         +D+  D V   C                   RM+     PN  +  
Sbjct: 315 FLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMT 374

Query: 348 SVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC---------------- 391
           SVLQA + +  L++G + H  V+R G   DV+V  +L+D+Y K                 
Sbjct: 375 SVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNR 434

Query: 392 ---------------GRMENSVELF----AESPKRNHVTWNTMIVGYV------------ 420
                          G  E+++ L      E  K + VTWN MI GY             
Sbjct: 435 NIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAVL 494

Query: 421 -----------------------QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
                                  Q G    ++  F++M +E V     + + +LRACASL
Sbjct: 495 HQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASL 554

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
           + L+ G ++HCL+++  +  DV VA ALIDMY+K  S+ +A  VF  + +    SWN MI
Sbjct: 555 SLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMI 614

Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
            G+++ GL  E + VF+ MQ+ G  P+ +TF  +LSAC N GL+ +G  YF SM+ +Y I
Sbjct: 615 MGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRI 674

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQ 637
            P +EHY  MV LLGRAG+LD+A  LI  +P +P   IW ALLG+C IH N++    +A+
Sbjct: 675 VPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAK 734

Query: 638 HILDFEPEDEATHVLLSNIYAMARSWEK-----------AASKEPGLSWIENQGMVHYFR 686
           ++   EP + A ++L+ N+Y++   WE                    SWI+    VH F 
Sbjct: 735 NLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFS 794

Query: 687 AGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFA 746
           + +  H D   I   L  L  + +K GY+PD++ V +++ E EK++ L  H+EKLA+ + 
Sbjct: 795 SDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYG 854

Query: 747 LFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           L KM    PIR+IKN RIC DCH+A K IS +  RE+ +RD  RFHHF++G CSC DFW
Sbjct: 855 LIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 913


>gi|357125908|ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Brachypodium distachyon]
          Length = 647

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 209/528 (39%), Positives = 313/528 (59%), Gaps = 11/528 (2%)

Query: 289 KSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVS 348
           K+G++ +AR +F++MP ++V  W+ M+A      L  D+++ F  MR+  + P++F   S
Sbjct: 120 KNGDLGSARELFDKMPTRNVATWNAMVAGLTNVGLDEDSLQFFLAMRREGMHPDEFGLGS 179

Query: 349 VLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRN 408
           V + CA +  +  G Q+H+ VVR G+ SD+ V N+L  +Y +CG +     +    P   
Sbjct: 180 VFRCCAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEAVLRALPSLT 239

Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHC 468
            V++NT I G  Q G+   A+  FS M   +V    VT+ S +  C+ LAAL  G QVH 
Sbjct: 240 IVSFNTTIAGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVSAISCCSDLAALAQGQQVHA 299

Query: 469 LTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAE 528
             +KA  D  V V  +L+ MY++CG + D+  V+D     +    +AMIS    HG   +
Sbjct: 300 QVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGYCGLDLFLLSAMISACGFHGQGHK 359

Query: 529 VLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMV 588
            +++F  M   G  PN +TF+ +L ACS+ GL ++G  +F+ M   YG +P ++HY  +V
Sbjct: 360 AVELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEGLEFFELMTKTYGFQPSVKHYNCIV 419

Query: 589 SLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEA 648
            LLGR+G LD+A  LI  +P +   +IW+ LL AC    N ++    A+ +++ +P D A
Sbjct: 420 DLLGRSGCLDEAEALILSMPVRADGVIWKTLLSACKTQKNFDMAERIAERVIESDPRDSA 479

Query: 649 THVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNI 697
            +VLLSNI A ++ W           EK   KEPG+SW+E++G VH F  GD SH     
Sbjct: 480 PYVLLSNIRATSKRWGDVTEVRKIMREKDIRKEPGVSWVEHKGQVHQFCTGDKSHPRQGE 539

Query: 698 IRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIR 757
           I   L+ +  K R+ GY PD++ V  D+ ++EKE  L  HSEKLA+AFA   +P   PIR
Sbjct: 540 IDEYLKEMMGKIRQCGYAPDMTMVFHDMEDEEKEVSLTHHSEKLAIAFAFLNLPEGVPIR 599

Query: 758 IIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           ++KNLR+C DCH AIK+IS++  REI++RDV RFHHF+DG CSCGD+W
Sbjct: 600 VMKNLRVCDDCHVAIKLISQVTGREIVVRDVSRFHHFRDGRCSCGDYW 647



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 142/297 (47%), Gaps = 2/297 (0%)

Query: 224 EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
           E++L FF  MR  G  P+ F    V + C GL  +   +  H   +++  + D+ V  +L
Sbjct: 156 EDSLQFFLAMRREGMHPDEFGLGSVFRCCAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSL 215

Query: 284 LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
             +Y + G ++    +   +P   ++ ++  IA   Q   S  A+E F  MR   VAP+ 
Sbjct: 216 AHMYMRCGCLAEGEAVLRALPSLTIVSFNTTIAGRTQNGDSEGALEYFSMMRGVEVAPDV 275

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
            TFVS +  C+ +  L  G Q+H+ V++ G+   V V  +L+ +Y++CG + +S  ++  
Sbjct: 276 VTFVSAISCCSDLAALAQGQQVHAQVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDG 335

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
               +    + MI      G+  KA+ +F +M+       EVT+ ++L AC+     + G
Sbjct: 336 YCGLDLFLLSAMISACGFHGQGHKAVELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEG 395

Query: 464 MQVHCLTVKA-NYDMDVVVANALIDMYAKCGSITDAR-LVFDMMNDWNEVSWNAMIS 518
           ++   L  K   +   V   N ++D+  + G + +A  L+  M    + V W  ++S
Sbjct: 396 LEFFELMTKTYGFQPSVKHYNCIVDLLGRSGCLDEAEALILSMPVRADGVIWKTLLS 452



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/287 (28%), Positives = 136/287 (47%), Gaps = 6/287 (2%)

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           ++FT  ++L A A +  L     +   + +  ++S     N L+    K G + ++ ELF
Sbjct: 76  DRFTTNNLLLAYADLGDLPTARHLFEGISKRNVMS----WNILIGGCIKNGDLGSARELF 131

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
            + P RN  TWN M+ G   +G    ++  F  M  E +   E    SV R CA L  + 
Sbjct: 132 DKMPTRNVATWNAMVAGLTNVGLDEDSLQFFLAMRREGMHPDEFGLGSVFRCCAGLLDVV 191

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
            G QVH   V++  D D+ V N+L  MY +CG + +   V   +     VS+N  I+G +
Sbjct: 192 SGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEAVLRALPSLTIVSFNTTIAGRT 251

Query: 522 MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
            +G S   L+ F +M+     P+ +TFV  +S CS+   L QG+    + V   G++  +
Sbjct: 252 QNGDSEGALEYFSMMRGVEVAPDVVTFVSAISCCSDLAALAQGQQ-VHAQVIKAGVDKVV 310

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
              TS+V +  R G L  + ++ +G      + +  A++ AC  H  
Sbjct: 311 PVITSLVHMYSRCGCLGDSERVYDGY-CGLDLFLLSAMISACGFHGQ 356



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 158/364 (43%), Gaps = 22/364 (6%)

Query: 71  DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQ 130
           DL TA  +   + K+    ++ + N+L+   +K   L  A +LFD+MP RN  ++   + 
Sbjct: 92  DLPTARHLFEGISKR----NVMSWNILIGGCIKNGDLGSARELFDKMPTRNVATWNAMVA 147

Query: 131 GYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDS 190
           G T      +++  F  + REG   + F   +  +    +        V A V + G DS
Sbjct: 148 GLTNVGLDEDSLQFFLAMRREGMHPDEFGLGSVFRCCAGLLDVVSGRQVHAYVVRSGMDS 207

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF---------EEALNFFSQMR 234
           +  VG +L   +  CGC+     V   L       FN            E AL +FS MR
Sbjct: 208 DMCVGNSLAHMYMRCGCLAEGEAVLRALPSLTIVSFNTTIAGRTQNGDSEGALEYFSMMR 267

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
            V   P+  TF   +  C  L  +   +  H   +K   +  + V  +L+ +Y++ G + 
Sbjct: 268 GVEVAPDVVTFVSAISCCSDLAALAQGQQVHAQVIKAGVDKVVPVITSLVHMYSRCGCLG 327

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
           ++ R+++     D+   S MI+          AVELF +M      PN+ TF+++L AC+
Sbjct: 328 DSERVYDGYCGLDLFLLSAMISACGFHGQGHKAVELFKQMMNGGAEPNEVTFLALLYACS 387

Query: 355 TMEGLDLGNQIHSLVVRV-GLLSDVFVSNALMDVYAKCGRMENSVELFAESPKR-NHVTW 412
                D G +   L+ +  G    V   N ++D+  + G ++ +  L    P R + V W
Sbjct: 388 HSGLKDEGLEFFELMTKTYGFQPSVKHYNCIVDLLGRSGCLDEAEALILSMPVRADGVIW 447

Query: 413 NTMI 416
            T++
Sbjct: 448 KTLL 451



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 8/133 (6%)

Query: 447 YSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN 506
           +S + RAC ++  L    Q+H     +    D    N L+  YA  G +  AR +F+ ++
Sbjct: 48  FSHIFRACRAIPLLR---QLHAFAATSGAAADRFTTNNLLLAYADLGDLPTARHLFEGIS 104

Query: 507 DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEA 566
             N +SWN +I G   +G      ++FD M  R    N  T+  +++  +N GL E    
Sbjct: 105 KRNVMSWNILIGGCIKNGDLGSARELFDKMPTR----NVATWNAMVAGLTNVGLDEDSLQ 160

Query: 567 YFKSMVANYGIEP 579
           +F +M    G+ P
Sbjct: 161 FFLAM-RREGMHP 172


>gi|125575213|gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
          Length = 617

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 223/587 (37%), Positives = 340/587 (57%), Gaps = 15/587 (2%)

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           MR  G  P  F  +   +A   L         H   ++  ++ +L+VA  L D+Y+K G 
Sbjct: 32  MRRAGVAPTRFALSSAARAAAALGAPLPGAQLHCVGVRLGFDTELFVASNLADMYSKCGL 91

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR--MRQAFVAPNQFTFVSVL 350
           +S A R+F++MP+KD + W+ MI  YA+   S++A  L  R   R+  V  +Q  F SVL
Sbjct: 92  LSEACRVFDQMPQKDAVAWTAMIDGYAKNG-SLEAAVLSFRDMKREGLVGADQHVFCSVL 150

Query: 351 QACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKR-NH 409
            A   ++   L   IH  V + G   +V V NAL+D+YAK   +E++  +    P   N 
Sbjct: 151 SASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNV 210

Query: 410 VTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCL 469
           V+  +MI GY++   V +A++++ ++  + V   E T+SS+++ CA  A LE G Q+H  
Sbjct: 211 VSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQ 270

Query: 470 TVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEV 529
            +K +   D  V + L+DMY KCG I+ +  +F+ +    +++WNA+I+ ++ HG   E 
Sbjct: 271 VIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREA 330

Query: 530 LKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVS 589
           ++ FD M   G RPN++ FV +L+ACS+ GL+++G  YF SM   +GIEP  EHY+ ++ 
Sbjct: 331 IQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIID 390

Query: 590 LLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEAT 649
             GRAG LD+A K I  +P +P+   W +LLGAC +  + E+G ++AQ+++  EP +   
Sbjct: 391 TYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGI 450

Query: 650 HVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNII 698
           HV LS IYA    WE   +           K PG SW+++    H F + D SH     I
Sbjct: 451 HVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDI 510

Query: 699 RGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRI 758
              LE L  + ++ GYIPD S +  ++ +  KER L  HSE++A+AFAL  MP + PI +
Sbjct: 511 YEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRYHSERIAVAFALISMPATKPIIV 570

Query: 759 IKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            KNLRIC+DCHTA K I K+ +R+II+RD  RFHHF +G CSCGD+W
Sbjct: 571 KKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVNGRCSCGDYW 617



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 211/434 (48%), Gaps = 32/434 (7%)

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
           MP RN +S+ T + G + +    +A+  F+ + R G     FA ++  +   ++G     
Sbjct: 1   MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 60

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FN 220
             +     +LG D+  FV + L D +S CG +  A +VFD +                 N
Sbjct: 61  AQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKN 120

Query: 221 DCFEEALNFFSQMRAVGF-KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
              E A+  F  M+  G    +   F  VL A  GL    ++KS H C  K  +E+++ V
Sbjct: 121 GSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAV 180

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKK-DVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
             AL+D+Y KS ++ +A R+ +  P   +V+  + MI  Y +TD   +A+ ++  +R+  
Sbjct: 181 RNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQG 240

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           V PN+FTF S+++ CA    L+ G Q+H+ V++  L+ D FV + L+D+Y KCG +  S+
Sbjct: 241 VEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSM 300

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
           +LF E   R  + WN +I  + Q G   +A+  F +M+   +    + + S+L AC+   
Sbjct: 301 QLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAG 360

Query: 459 ALEPGM-------QVHCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNE 510
            ++ G+       + H +  K  +       + +ID Y + G + +A + + +M    N 
Sbjct: 361 LVDEGLKYFYSMKEAHGIEPKEEH------YSCIIDTYGRAGRLDEAYKFISEMPIKPNA 414

Query: 511 VSWNAMISGYSMHG 524
             W +++    M G
Sbjct: 415 YGWCSLLGACRMRG 428



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 172/337 (51%), Gaps = 7/337 (2%)

Query: 303 MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG 362
           MP+++ + W+ +++  +Q  +  DA+  F  MR+A VAP +F   S  +A A +     G
Sbjct: 1   MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 60

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
            Q+H + VR+G  +++FV++ L D+Y+KCG +  +  +F + P+++ V W  MI GY + 
Sbjct: 61  AQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKN 120

Query: 423 GEVGKAMIMFSKMLEEQ-VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVV 481
           G +  A++ F  M  E  V A +  + SVL A   L        +HC   KA ++++V V
Sbjct: 121 GSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAV 180

Query: 482 ANALIDMYAKCGSITDARLVFDM-MNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG 540
            NALIDMYAK   +  A  V  +    WN VS  +MI GY       E L ++  ++++G
Sbjct: 181 RNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQG 240

Query: 541 WRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKA 600
             PN  TF  ++  C+   LLEQG      ++    I       T +V + G+ G +  +
Sbjct: 241 VEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGST-LVDMYGKCGLISLS 299

Query: 601 AKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQ 637
            +L   I ++  +  W A++     H +   GR + Q
Sbjct: 300 MQLFNEIEYRTDIA-WNAVINVFAQHGH---GREAIQ 332



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 178/379 (46%), Gaps = 25/379 (6%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           +HC  ++ G   +LF  + L ++Y K   L +A ++FD+MP+++ +++   I GY  +  
Sbjct: 63  LHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGS 122

Query: 138 FVEAVGLFSTLHREGH-ELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGT 196
              AV  F  + REG    +   F + L     +    L   +  CV K G +    V  
Sbjct: 123 LEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRN 182

Query: 197 ALIDAFSVCGCVEFARKVF----------------DGLF-NDCFEEALNFFSQMRAVGFK 239
           ALID ++    VE A +V                 DG    DC EEAL  + ++R  G +
Sbjct: 183 ALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVE 242

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           PN FTF+ ++K C     +      H   +KT    D +V   L+D+Y K G IS + ++
Sbjct: 243 PNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQL 302

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL 359
           F E+  +  I W+ +I  +AQ     +A++ F RM  + + PN   FVS+L AC+    +
Sbjct: 303 FNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLV 362

Query: 360 DLG-NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMI- 416
           D G    +S+    G+       + ++D Y + GR++ + +  +E P K N   W +++ 
Sbjct: 363 DEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLG 422

Query: 417 ----VGYVQLGEVGKAMIM 431
                G  +LGEV    +M
Sbjct: 423 ACRMRGSKELGEVAAQNLM 441



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 120/276 (43%), Gaps = 30/276 (10%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           + H + + L +     D   + +IHC V K G  L++   N L+++Y K   +  A+++ 
Sbjct: 142 DQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVL 201

Query: 115 DEMPER-NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
              P   N +S  + I GY  +    EA+ ++  L R+G E N F F++ +K        
Sbjct: 202 KIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALL 261

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF--- 223
           E    + A V K     ++FVG+ L+D +  CG +  + ++F+ +       +N      
Sbjct: 262 EQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVF 321

Query: 224 ------EEALNFFSQMRAVGFKPNNFTFAFVLKACL-------GLDTIRVAKSAHGCALK 270
                  EA+  F +M   G +PN+  F  +L AC        GL      K AHG   K
Sbjct: 322 AQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPK 381

Query: 271 TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK 306
             +         ++D Y ++G +  A +   EMP K
Sbjct: 382 EEH------YSCIIDTYGRAGRLDEAYKFISEMPIK 411



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 44/201 (21%), Positives = 81/201 (40%), Gaps = 19/201 (9%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N  ++++ ++ C     L+    +H QV+K     D F  + L+++Y K   +  + +
Sbjct: 242 EPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQ 301

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           LF+E+  R  I++   I  +       EA+  F  +   G   N  AF + L      G 
Sbjct: 302 LFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGL 361

Query: 173 AELCPCVFACVYKL-GHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFS 231
            +     F  + +  G +      + +ID +   G +               +EA  F S
Sbjct: 362 VDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRL---------------DEAYKFIS 406

Query: 232 QMRAVGFKPNNFTFAFVLKAC 252
           +M     KPN + +  +L AC
Sbjct: 407 EM---PIKPNAYGWCSLLGAC 424


>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
          Length = 734

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 244/700 (34%), Positives = 350/700 (50%), Gaps = 73/700 (10%)

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCV----------EFARKVFDG----------- 217
           +F    +L  ++ A      I   SV GCV            A +VFDG           
Sbjct: 35  IFHSSARLLPEAGACAAKKAIHRQSVRGCVPSSSVIARGLHNAHRVFDGTPTRSLPAWTS 94

Query: 218 LFNDCFEEA-----LNFFSQM--RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALK 270
           + + C  E      +  F++M        PN F  A VL+ C GL  +   +  HG  L+
Sbjct: 95  IISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRCCAGLGDVESGRRIHGWILR 154

Query: 271 TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVEL 330
           +    D+ +  A+LD+Y K G+   ARR F  M +KD   W+ +I    Q    + A +L
Sbjct: 155 SGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWNIVIRACLQDGDLVGATQL 214

Query: 331 F-------------------------------CRMRQAFVAPNQFTFVSVLQACATMEGL 359
           F                                +M +A V  + +T+  V      +   
Sbjct: 215 FDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSNYTYSMVFALAGLLSSR 274

Query: 360 DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF---AESPKRNHVTWNTMI 416
           DLG Q+H  VV   L  D FV  +LMD+Y KCG ME+++ +F   ++  +     W+TM+
Sbjct: 275 DLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTEDRQFAWSTMV 334

Query: 417 VGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD 476
            GYVQ G   +A+  F +ML E VPA +   +SV  ACA+   +E G QVH    K  + 
Sbjct: 335 AGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQGRQVHGFVEKLGHR 394

Query: 477 MDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLM 536
            D  +A+A++DMY+K GS+ DA  +F      N   W  M+  Y+ HG     L++F  M
Sbjct: 395 FDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMALEIFSRM 454

Query: 537 QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGH 596
           +     PN +T V VLSACS+ GL+  G  YF  M   YGI P  EHY  MV L GRAG 
Sbjct: 455 KAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNCMVDLYGRAGL 514

Query: 597 LDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNI 656
           LDKA   IE        ++W+ LL AC +H ++E  +L+++ ++  E  D  ++VL+SN+
Sbjct: 515 LDKAKNFIEENKISHEAVVWKTLLSACRLHKHIEYAQLASEKLVQLEQYDAGSYVLMSNM 574

Query: 657 YAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWL 705
           YA    W           E+   K+PG SWI  + +VH F A DTSH     I   LE L
Sbjct: 575 YATNNKWLDTFKLRSSMKERRVRKQPGQSWIHLKNVVHRFVALDTSHPRSAEIYAYLEKL 634

Query: 706 NMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRIC 765
             + ++ GY      V+ D+ E+++E  L  HSEKLA+AF +   P  + +RI KNLR+C
Sbjct: 635 MERLKEMGYTSRTDLVVHDIEEEQRETSLKFHSEKLAIAFGIISTPVGTALRIFKNLRVC 694

Query: 766 VDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            DCH AIK I++   REI++RD++RFHHF+DG CSC DFW
Sbjct: 695 EDCHEAIKFITRATDREIVVRDLYRFHHFKDGQCSCEDFW 734



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/415 (25%), Positives = 176/415 (42%), Gaps = 54/415 (13%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNR-------- 106
           N+   A  L+ C    D+++   IH  +L+ G C D+   N +L++Y K           
Sbjct: 125 NAFVLAGVLRCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAF 184

Query: 107 -----------------------LPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVG 143
                                  L  AT+LFDE   R+  S+ T + G        EA+G
Sbjct: 185 GAMAQKDATSWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALG 244

Query: 144 LFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFS 203
               + R G   + + ++    +   +   +L   +   V     + +AFVG +L+D + 
Sbjct: 245 RLQQMVRAGVTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYC 304

Query: 204 VCGCVEFARKVFDG-------------------LFNDCFEEALNFFSQMRAVGFKPNNFT 244
            CG +E A  +FD                    + N   EEAL FF +M   G     F 
Sbjct: 305 KCGEMESALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFI 364

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
              V  AC     +   +  HG   K  +  D  +A A++D+Y+KSG + +A RIF    
Sbjct: 365 LTSVASACANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQ 424

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
            K+V  W+ M+  YA       A+E+F RM+   + PN+ T V+VL AC+    +  G  
Sbjct: 425 TKNVALWTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYH 484

Query: 365 IHSLVV-RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNH--VTWNTMI 416
             +L+    G++ +    N ++D+Y + G ++ +   F E  K +H  V W T++
Sbjct: 485 YFNLMQEEYGIVPNTEHYNCMVDLYGRAGLLDKAKN-FIEENKISHEAVVWKTLL 538


>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
 gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 698

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 223/587 (37%), Positives = 340/587 (57%), Gaps = 15/587 (2%)

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           MR  G  P  F  +   +A   L         H   ++  ++ +L+VA  L D+Y+K G 
Sbjct: 113 MRRAGVAPTRFALSSAARAAAALGAPLPGAQLHCVGVRLGFDTELFVASNLADMYSKCGL 172

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR--MRQAFVAPNQFTFVSVL 350
           +S A R+F++MP+KD + W+ MI  YA+   S++A  L  R   R+  V  +Q  F SVL
Sbjct: 173 LSEACRVFDQMPQKDAVAWTAMIDGYAKNG-SLEAAVLSFRDMKREGLVGADQHVFCSVL 231

Query: 351 QACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKR-NH 409
            A   ++   L   IH  V + G   +V V NAL+D+YAK   +E++  +    P   N 
Sbjct: 232 SASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNV 291

Query: 410 VTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCL 469
           V+  +MI GY++   V +A++++ ++  + V   E T+SS+++ CA  A LE G Q+H  
Sbjct: 292 VSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQ 351

Query: 470 TVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEV 529
            +K +   D  V + L+DMY KCG I+ +  +F+ +    +++WNA+I+ ++ HG   E 
Sbjct: 352 VIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREA 411

Query: 530 LKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVS 589
           ++ FD M   G RPN++ FV +L+ACS+ GL+++G  YF SM   +GIEP  EHY+ ++ 
Sbjct: 412 IQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIID 471

Query: 590 LLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEAT 649
             GRAG LD+A K I  +P +P+   W +LLGAC +  + E+G ++AQ+++  EP +   
Sbjct: 472 TYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGI 531

Query: 650 HVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNII 698
           HV LS IYA    WE   +           K PG SW+++    H F + D SH     I
Sbjct: 532 HVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDI 591

Query: 699 RGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRI 758
              LE L  + ++ GYIPD S +  ++ +  KER L  HSE++A+AFAL  MP + PI +
Sbjct: 592 YEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRYHSERIAVAFALISMPATKPIIV 651

Query: 759 IKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            KNLRIC+DCHTA K I K+ +R+II+RD  RFHHF +G CSCGD+W
Sbjct: 652 KKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVNGRCSCGDYW 698



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 135/487 (27%), Positives = 240/487 (49%), Gaps = 23/487 (4%)

Query: 60  ATSLQSCIQNDDLQTAMTIHCQ-VLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           A+ LQSC +  DL+    +H + VL        F  N L+ +Y     L  A +LF  MP
Sbjct: 24  ASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMP 83

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
            RN +S+ T + G + +    +A+  F+ + R G     FA ++  +   ++G       
Sbjct: 84  RRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGAQ 143

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDC 222
           +     +LG D+  FV + L D +S CG +  A +VFD +                 N  
Sbjct: 144 LHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGS 203

Query: 223 FEEALNFFSQMRAVGF-KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
            E A+  F  M+  G    +   F  VL A  GL    ++KS H C  K  +E+++ V  
Sbjct: 204 LEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRN 263

Query: 282 ALLDLYTKSGEISNARRIFEEMPKK-DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
           AL+D+Y KS ++ +A R+ +  P   +V+  + MI  Y +TD   +A+ ++  +R+  V 
Sbjct: 264 ALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVE 323

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           PN+FTF S+++ CA    L+ G Q+H+ V++  L+ D FV + L+D+Y KCG +  S++L
Sbjct: 324 PNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQL 383

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F E   R  + WN +I  + Q G   +A+  F +M+   +    + + S+L AC+    +
Sbjct: 384 FNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLV 443

Query: 461 EPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMI 517
           + G++ +  ++K  + ++    +   +ID Y + G + +A + + +M    N   W +++
Sbjct: 444 DEGLK-YFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLL 502

Query: 518 SGYSMHG 524
               M G
Sbjct: 503 GACRMRG 509



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 178/379 (46%), Gaps = 25/379 (6%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           +HC  ++ G   +LF  + L ++Y K   L +A ++FD+MP+++ +++   I GY  +  
Sbjct: 144 LHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGS 203

Query: 138 FVEAVGLFSTLHREGH-ELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGT 196
              AV  F  + REG    +   F + L     +    L   +  CV K G +    V  
Sbjct: 204 LEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRN 263

Query: 197 ALIDAFSVCGCVEFARKVF----------------DGLF-NDCFEEALNFFSQMRAVGFK 239
           ALID ++    VE A +V                 DG    DC EEAL  + ++R  G +
Sbjct: 264 ALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVE 323

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           PN FTF+ ++K C     +      H   +KT    D +V   L+D+Y K G IS + ++
Sbjct: 324 PNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQL 383

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL 359
           F E+  +  I W+ +I  +AQ     +A++ F RM  + + PN   FVS+L AC+    +
Sbjct: 384 FNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLV 443

Query: 360 DLG-NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMI- 416
           D G    +S+    G+       + ++D Y + GR++ + +  +E P K N   W +++ 
Sbjct: 444 DEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLG 503

Query: 417 ----VGYVQLGEVGKAMIM 431
                G  +LGEV    +M
Sbjct: 504 ACRMRGSKELGEVAAQNLM 522



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 153/297 (51%), Gaps = 13/297 (4%)

Query: 340 APNQFTFV---SVLQACATMEGLDLGNQIHS-LVVRVGLLSDVFVSNALMDVYAKCGRME 395
           AP+  T V   S+LQ+C     L  G  +H+ LV+     +  F++N L+ +Y+ C  + 
Sbjct: 14  APDAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLA 73

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
           +++ LFA  P+RN V+W T++ G  Q      A+  F+ M    V  T    SS  RA A
Sbjct: 74  SALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAA 133

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
           +L A  PG Q+HC+ V+  +D ++ VA+ L DMY+KCG +++A  VFD M   + V+W A
Sbjct: 134 ALGAPLPGAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTA 193

Query: 516 MISGYSMHG-LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG-EAYFKSMVA 573
           MI GY+ +G L A VL   D+ ++     +   F  VLSA  +GGL +          V 
Sbjct: 194 MIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSA--SGGLKDGWLSKSIHCCVT 251

Query: 574 NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
             G E  +    +++ +  ++  ++ A+++++  P       W  + G  +I   +E
Sbjct: 252 KAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGG-----WNVVSGTSMIDGYIE 303



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 120/276 (43%), Gaps = 30/276 (10%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           + H + + L +     D   + +IHC V K G  L++   N L+++Y K   +  A+++ 
Sbjct: 223 DQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVL 282

Query: 115 DEMPER-NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
              P   N +S  + I GY  +    EA+ ++  L R+G E N F F++ +K        
Sbjct: 283 KIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALL 342

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF-------DGLFNDCF--- 223
           E    + A V K     ++FVG+ L+D +  CG +  + ++F       D  +N      
Sbjct: 343 EQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVF 402

Query: 224 ------EEALNFFSQMRAVGFKPNNFTFAFVLKACL-------GLDTIRVAKSAHGCALK 270
                  EA+  F +M   G +PN+  F  +L AC        GL      K AHG   K
Sbjct: 403 AQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPK 462

Query: 271 TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK 306
                + Y  +  +D Y ++G +  A +   EMP K
Sbjct: 463 E----EHYSCI--IDTYGRAGRLDEAYKFISEMPIK 492



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 44/201 (21%), Positives = 81/201 (40%), Gaps = 19/201 (9%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N  ++++ ++ C     L+    +H QV+K     D F  + L+++Y K   +  + +
Sbjct: 323 EPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQ 382

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           LF+E+  R  I++   I  +       EA+  F  +   G   N  AF + L      G 
Sbjct: 383 LFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGL 442

Query: 173 AELCPCVFACVYKL-GHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFS 231
            +     F  + +  G +      + +ID +   G +               +EA  F S
Sbjct: 443 VDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRL---------------DEAYKFIS 487

Query: 232 QMRAVGFKPNNFTFAFVLKAC 252
           +M     KPN + +  +L AC
Sbjct: 488 EM---PIKPNAYGWCSLLGAC 505


>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Glycine max]
          Length = 712

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 228/658 (34%), Positives = 359/658 (54%), Gaps = 58/658 (8%)

Query: 206 GCVEFARKVFDGLFNDCF----------------EEALNFFSQMRAVGFKPNNFTFAFVL 249
           G + +AR+VFD +                     +  ++ +  M A   KP+ FTF F+L
Sbjct: 55  GKMIYARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLL 114

Query: 250 KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
           K       ++  K     A+K  ++ +L+V  A + +++    +  AR++F+     +V+
Sbjct: 115 KGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVV 174

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
            W+ M++ Y +      +  LF  M +  V+PN  T V +L AC+ ++ L+ G  I+  +
Sbjct: 175 TWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYI 234

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFA--------------------------- 402
               +  ++ + N L+D++A CG M+ +  +F                            
Sbjct: 235 NGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLAR 294

Query: 403 ----ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
               + P+R++V+W  MI GY+++    +A+ +F +M    V   E T  S+L ACA L 
Sbjct: 295 KYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLG 354

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           ALE G  V     K +   D  V NALIDMY KCG++  A+ VF  M+  ++ +W AMI 
Sbjct: 355 ALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIV 414

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           G +++G   E L +F  M +    P+ +T++GVL AC++ G++E+G+++F SM   +GI+
Sbjct: 415 GLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIK 474

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P + HY  MV LLGRAG L++A ++I  +P +P+ ++W +LLGAC +H NV++  ++A+ 
Sbjct: 475 PNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQ 534

Query: 639 ILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRA 687
           IL+ EPE+ A +VLL NIYA  + W           E+   K PG S +E  G V+ F A
Sbjct: 535 ILELEPENGAVYVLLCNIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYEFVA 594

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFAL 747
           GD SH     I   LE +     KAGY PD S V  D+ E++KE  L+ HSEKLA+A+AL
Sbjct: 595 GDQSHPQSKEIYAKLENMMQDLIKAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIAYAL 654

Query: 748 FKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
               P   IRI+KNLR+CVDCH   K++S+   RE+I+RD  RFHHF+ G CSC +FW
Sbjct: 655 ISSGPGITIRIVKNLRMCVDCHHMAKLVSEAYNRELIVRDKTRFHHFRHGSCSCNNFW 712



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 134/520 (25%), Positives = 232/520 (44%), Gaps = 52/520 (10%)

Query: 56  SHSYATSLQSCIQN-DDLQTAMTIHCQVLKKGNCLD-LFATNVL-LNVYVKLNRLPDATK 112
           SH +  S  S ++    +     IH   +K G   D LF   V+      +  ++  A +
Sbjct: 3   SHCFGESPISLLEKCKSMYQLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQ 62

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +FD +P+     + T I+GY+  +     V ++  +     + + F F   LK       
Sbjct: 63  VFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMA 122

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--------------GL 218
            +    +     K G DSN FV  A I  FS+C  V+ ARKVFD                
Sbjct: 123 LQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSG 182

Query: 219 FNDC--FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
           +N    F+++   F +M   G  PN+ T   +L AC  L  +   K  +        E +
Sbjct: 183 YNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERN 242

Query: 277 LYVAVALLDLYTKSGEISN-------------------------------ARRIFEEMPK 305
           L +   L+D++   GE+                                 AR+ F+++P+
Sbjct: 243 LILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPE 302

Query: 306 KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
           +D + W+ MI  Y + +  I+A+ LF  M+ + V P++FT VS+L ACA +  L+LG  +
Sbjct: 303 RDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWV 362

Query: 366 HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEV 425
            + + +  + +D FV NAL+D+Y KCG +  + ++F E   ++  TW  MIVG    G  
Sbjct: 363 KTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHG 422

Query: 426 GKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVH-CLTVKANYDMDVVVANA 484
            +A+ MFS M+E  +   E+TY  VL AC     +E G      +T++     +V     
Sbjct: 423 EEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGC 482

Query: 485 LIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
           ++D+  + G + +A  ++ +M    N + W +++    +H
Sbjct: 483 MVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVH 522



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 180/373 (48%), Gaps = 33/373 (8%)

Query: 289 KSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVS 348
           +SG++  AR++F+ +P+  +  W+ MI  Y++ +   + V ++  M  + + P++FTF  
Sbjct: 53  ESGKMIYARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPF 112

Query: 349 VLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRN 408
           +L+       L  G  + +  V+ G  S++FV  A + +++ C  ++ + ++F       
Sbjct: 113 LLKGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWE 172

Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHC 468
            VTWN M+ GY ++ +  K+ ++F +M +  V    VT   +L AC+ L  LE G  ++ 
Sbjct: 173 VVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYK 232

Query: 469 LTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND-----WNE------------- 510
                  + ++++ N LIDM+A CG + +A+ VFD M +     W               
Sbjct: 233 YINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDL 292

Query: 511 -------------VSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSN 557
                        VSW AMI GY       E L +F  MQ    +P+  T V +L+AC++
Sbjct: 293 ARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAH 352

Query: 558 GGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWR 617
            G LE GE + K+ +    I+       +++ +  + G++ KA K+ + +  +     W 
Sbjct: 353 LGALELGE-WVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDK-FTWT 410

Query: 618 ALLGACIIHNNVE 630
           A++    I+ + E
Sbjct: 411 AMIVGLAINGHGE 423



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 105/447 (23%), Positives = 184/447 (41%), Gaps = 59/447 (13%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD-ATKLFDEMPERN 121
           L+   +N  LQ    +    +K G   +LF     ++++  L RL D A K+FD      
Sbjct: 114 LKGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMF-SLCRLVDLARKVFDMGDAWE 172

Query: 122 TISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFA 181
            +++   + GY    QF ++  LF  + + G   N       L     +   E    ++ 
Sbjct: 173 VVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYK 232

Query: 182 CVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN--------------------- 220
            +     + N  +   LID F+ CG ++ A+ VFD + N                     
Sbjct: 233 YINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDL 292

Query: 221 --------------------------DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLG 254
                                     + F EAL  F +M+    KP+ FT   +L AC  
Sbjct: 293 ARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAH 352

Query: 255 LDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFM 314
           L  + + +       K   + D +V  AL+D+Y K G +  A+++F+EM  KD   W+ M
Sbjct: 353 LGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAM 412

Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIH-SLVVRVG 373
           I   A      +A+ +F  M +A + P++ T++ VL AC     ++ G     S+ ++ G
Sbjct: 413 IVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHG 472

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMIVG-----YVQLGEVGK 427
           +  +V     ++D+  + GR+E + E+    P K N + W +++        VQL E+  
Sbjct: 473 IKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAA 532

Query: 428 AMIMFSKMLEEQVPATEVTYSSVLRAC 454
             I+    LE +  A  V   ++  AC
Sbjct: 533 KQIL---ELEPENGAVYVLLCNIYAAC 556


>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
 gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 624

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 211/541 (39%), Positives = 319/541 (58%), Gaps = 11/541 (2%)

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
           +L VA  LL +Y + G + +A+ +F+ M K+    WS ++  YA+         +F  + 
Sbjct: 84  NLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKVGNFFSCFWMFRELL 143

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
           ++    + ++   V++AC  ++ L  G  IH + ++ GL    FV   L+D+YA+C  +E
Sbjct: 144 RSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVE 203

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
           ++ ++F +  KR+  TW  MI    + G   ++++ F +M  + +   +V   +V+ ACA
Sbjct: 204 DAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACA 263

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
            L A+     +H       Y +DV++  A+IDMYAKCGS+  AR +FD M   N ++W+A
Sbjct: 264 KLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSA 323

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           MI+ Y  HG   + L++F +M + G  PN +TFV +L ACS+ GL+E+G+ +F SM   Y
Sbjct: 324 MIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEY 383

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS 635
           G+ P ++HYT MV LLGRAG LD+A ++IEG+P +   ++W ALLGAC IH ++++    
Sbjct: 384 GVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLGACRIHRHLDLAERV 443

Query: 636 AQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHY 684
           A+ +L  + +    +VLLSNIYA A  WE  A            K PG +WIE    ++ 
Sbjct: 444 ARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAKTRDLMTKGGLRKIPGRTWIEVGEKLYQ 503

Query: 685 FRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALA 744
           F  GD +H   N I  ML+ L  K   AGY PD + VL DV E+ K+  L+ HSEKLA+A
Sbjct: 504 FGVGDKTHPRSNEIYKMLKRLGEKLEVAGYHPDTNDVLYDVDEEVKQGLLYSHSEKLAIA 563

Query: 745 FALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
           F L  +P   PIRI KNLR+C DCHT  K +S I Q+ II+RD  RFHHF++G CSC D+
Sbjct: 564 FGLLVLPQGHPIRITKNLRVCGDCHTFCKFVSLIEQKTIIVRDAKRFHHFKEGVCSCRDY 623

Query: 805 W 805
           W
Sbjct: 624 W 624



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 196/416 (47%), Gaps = 35/416 (8%)

Query: 30  AQAALSTQ---QCSNSTTTPITFS-----VSEFNSHSYATSLQSCIQNDDLQTAMTIHCQ 81
           + A+LS Q    C+++  TP +       V  +++  + +SL SC    +L     +H Q
Sbjct: 19  SSASLSWQFDVNCNSNEPTPCSQESECSHVLHYDTKRFRSSLLSC---RNLFQVRQVHAQ 75

Query: 82  VLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEA 141
           +   G   +L   N LL +YV+   L DA +LFD M +R+  S+   + GY     F   
Sbjct: 76  IATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKVGNFFSC 135

Query: 142 VGLFSTLHREGHELNPFAFTAFLKV---LVSMGWAELCPCVFACVYKLGHDSNAFVGTAL 198
             +F  L R G  L+ ++    ++    L  +    L  C+     K G D   FV   L
Sbjct: 136 FWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCI---TLKCGLDYGHFVCATL 192

Query: 199 IDAFSVCGCVEFARKVFDGLFNDCFE----------------EALNFFSQMRAVGFKPNN 242
           +D ++ C  VE A ++F  ++                     E+L FF +MR  G  P+ 
Sbjct: 193 VDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDK 252

Query: 243 FTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEE 302
                V+ AC  L  +  AK+ H     T Y +D+ +  A++D+Y K G + +AR IF+ 
Sbjct: 253 VALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDR 312

Query: 303 MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG 362
           M  ++VI WS MIA Y        A+ELF  M ++ + PN+ TFVS+L AC+    ++ G
Sbjct: 313 MQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEG 372

Query: 363 NQ-IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMI 416
            +   S+    G+  DV     ++D+  + GR++ ++E+    P +++ V W  ++
Sbjct: 373 QRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALL 428



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 174/351 (49%), Gaps = 18/351 (5%)

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFDGLFN----------DCFEEALNFFS------QMR 234
           N  V   L+  +   G +E A+++FDG+              + +  NFFS      ++ 
Sbjct: 84  NLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKVGNFFSCFWMFRELL 143

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
             G   ++++   V++AC  L  ++  +  H   LK   +   +V   L+D+Y +   + 
Sbjct: 144 RSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVE 203

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
           +A +IF +M K+D+  W+ MI   A++ + ++++  F RMR   + P++   V+V+ ACA
Sbjct: 204 DAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACA 263

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
            +  ++    IH+ +   G   DV +  A++D+YAKCG +E++  +F     RN +TW+ 
Sbjct: 264 KLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSA 323

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ-VHCLTVKA 473
           MI  Y   G+  KA+ +F  ML   +    +T+ S+L AC+    +E G +    +  + 
Sbjct: 324 MIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEY 383

Query: 474 NYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
               DV     ++D+  + G + +A  ++  M  + +EV W A++    +H
Sbjct: 384 GVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLGACRIH 434



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 135/268 (50%), Gaps = 2/268 (0%)

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
            Q+H+ +   G   ++ V+N L+ +Y + G +E++ ELF    KR+  +W+ ++ GY ++
Sbjct: 70  RQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKV 129

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
           G       MF ++L    P  + +   V+RAC  L  L+ G  +HC+T+K   D    V 
Sbjct: 130 GNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVC 189

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
             L+DMYA+C  + DA  +F  M   +  +W  MI   +  G+  E L  FD M+ +G  
Sbjct: 190 ATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIV 249

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           P+ +  V V+ AC+  G + + +A   + +   G    +   T+M+ +  + G ++ A  
Sbjct: 250 PDKVALVTVVYACAKLGAMNKAKA-IHAYINGTGYSLDVILGTAMIDMYAKCGSVESARW 308

Query: 603 LIEGIPFQPSVMIWRALLGACIIHNNVE 630
           + + +  + +V+ W A++ A   H   E
Sbjct: 309 IFDRMQVR-NVITWSAMIAAYGYHGQGE 335


>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Brachypodium distachyon]
          Length = 669

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 218/549 (39%), Positives = 325/549 (59%), Gaps = 16/549 (2%)

Query: 273 YEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFC 332
           +  D + A ALL +Y       +AR+ F+E+P  + +  + M + Y + +L   ++ LF 
Sbjct: 121 FPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYVRNNLVYPSLALFR 180

Query: 333 RM--RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAK 390
           ++    +  A ++   +    A A +    + + +H+LVV+ GL  D  V N ++D YAK
Sbjct: 181 KLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGDAGVVNTMLDAYAK 240

Query: 391 CGRME-NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML--EEQVPATEVTY 447
            GR +  +     ++ +++ V+WN+MI  Y Q G    A+ ++ KML     +    VT 
Sbjct: 241 GGRRDLGAARKVFDTMEKDVVSWNSMIALYAQNGMSADALGLYRKMLNVSGSIKCNAVTL 300

Query: 448 SSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND 507
           S++L ACA    ++ G  +H   V+   + +V V  +++DMY+KCG +  AR  F  + +
Sbjct: 301 SAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCGRVEMARKAFQKIKE 360

Query: 508 WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAY 567
            N +SW+AMI+GY MHG   E L +F+ M + G  PN +TF+ VL+ACS+ GLL++G  +
Sbjct: 361 KNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVLAACSHAGLLDKGRYW 420

Query: 568 FKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
           + +M   +GIEP +EHY  MV LLGRAG LD+A  LI+ +  +P   IW ALL AC IH 
Sbjct: 421 YNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAAIWGALLSACRIHK 480

Query: 628 NVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWI 676
           NVE+  +SA+ + + +  +   +VLLSNIYA A  W+           +   K PG S +
Sbjct: 481 NVELAEISAKRLFELDATNCGYYVLLSNIYAEAGMWKDVERMRVLVKTRGIEKPPGYSSV 540

Query: 677 ENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWV 736
           E +G  H F  GD SH     I   L  L  K ++AGY+P+  +VL D+ E+EK   L +
Sbjct: 541 ELKGRTHLFYVGDKSHPQHKEIYSYLGKLLEKMQEAGYVPNTGSVLHDLDEEEKASALHI 600

Query: 737 HSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQD 796
           HSEKLA+AFAL    P S I +IKNLR+C DCHTAIK+I+KI QREII+RD+ RFHHF+D
Sbjct: 601 HSEKLAIAFALMNSVPGSVIHVIKNLRVCTDCHTAIKLITKIAQREIIVRDLQRFHHFKD 660

Query: 797 GCCSCGDFW 805
           G CSCGD+W
Sbjct: 661 GSCSCGDYW 669



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 173/358 (48%), Gaps = 25/358 (6%)

Query: 190 SNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQM 233
           S+ F  +AL+  ++ C     ARK FD +                 N+    +L  F ++
Sbjct: 123 SDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYVRNNLVYPSLALFRKL 182

Query: 234 RAVGFKP--NNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
            A G     +         A   +    +  S H   +KT  + D  V   +LD Y K G
Sbjct: 183 IASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGDAGVVNTMLDAYAKGG 242

Query: 292 --EISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ--AFVAPNQFTFV 347
             ++  AR++F+ M +KDV+ W+ MIA YAQ  +S DA+ L+ +M      +  N  T  
Sbjct: 243 RRDLGAARKVFDTM-EKDVVSWNSMIALYAQNGMSADALGLYRKMLNVSGSIKCNAVTLS 301

Query: 348 SVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKR 407
           ++L ACA    +  G  IH+ VVR+GL  +V+V  +++D+Y+KCGR+E + + F +  ++
Sbjct: 302 AILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCGRVEMARKAFQKIKEK 361

Query: 408 NHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ-V 466
           N ++W+ MI GY   G   +A+ +F++M         +T+ SVL AC+    L+ G    
Sbjct: 362 NILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVLAACSHAGLLDKGRYWY 421

Query: 467 HCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
           + +  +   +  V     ++D+  + G + +A  L+ +M    +   W A++S   +H
Sbjct: 422 NAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAAIWGALLSACRIH 479



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 161/350 (46%), Gaps = 23/350 (6%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D F+ + LL++Y   +R  DA K FDE+P  N +       GY  ++    ++ LF  L 
Sbjct: 124 DPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYVRNNLVYPSLALFRKLI 183

Query: 150 REGHELNPFAFTAFLKVLVSMGWAE--LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGC 207
             G         A +    S    +  +   + A V K G D +A V   ++DA++  G 
Sbjct: 184 ASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGDAGVVNTMLDAYAKGGR 243

Query: 208 VEF--ARKVFDGLFNDCFE---------------EALNFFSQMRAVG--FKPNNFTFAFV 248
            +   ARKVFD +  D                  +AL  + +M  V    K N  T + +
Sbjct: 244 RDLGAARKVFDTMEKDVVSWNSMIALYAQNGMSADALGLYRKMLNVSGSIKCNAVTLSAI 303

Query: 249 LKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDV 308
           L AC    TI+  K  H   ++   E ++YV  +++D+Y+K G +  AR+ F+++ +K++
Sbjct: 304 LLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCGRVEMARKAFQKIKEKNI 363

Query: 309 IPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ-IHS 367
           + WS MI  Y       +A+++F  M ++   PN  TF+SVL AC+    LD G    ++
Sbjct: 364 LSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVLAACSHAGLLDKGRYWYNA 423

Query: 368 LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE-SPKRNHVTWNTMI 416
           +  R G+   V     ++D+  + G ++ +  L  E   K +   W  ++
Sbjct: 424 MKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAAIWGALL 473



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 124/269 (46%), Gaps = 25/269 (9%)

Query: 71  DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNR--LPDATKLFDEMPERNTISFVTT 128
           D     ++H  V+K G   D    N +L+ Y K  R  L  A K+FD M E++ +S+ + 
Sbjct: 208 DCGITSSLHALVVKTGLDGDAGVVNTMLDAYAKGGRRDLGAARKVFDTM-EKDVVSWNSM 266

Query: 129 IQGYTVSSQFVEAVGLF-STLHREGH-ELNPFAFTAFLKVLVSMGWAELCPCVFACVYKL 186
           I  Y  +    +A+GL+   L+  G  + N    +A L      G  +   C+   V ++
Sbjct: 267 IALYAQNGMSADALGLYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRM 326

Query: 187 GHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFF 230
           G + N +VGT+++D +S CG VE ARK F  +                 +   +EAL+ F
Sbjct: 327 GLEENVYVGTSVVDMYSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIF 386

Query: 231 SQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA--VALLDLYT 288
           ++M   G  PN  TF  VL AC     +   +  +  A+K  + ++  V     ++DL  
Sbjct: 387 NEMCRSGQNPNYITFISVLAACSHAGLLDKGRYWYN-AMKKRFGIEPGVEHYGCMVDLLG 445

Query: 289 KSGEISNARRIFEEMP-KKDVIPWSFMIA 316
           ++G +  A  + +EM  K D   W  +++
Sbjct: 446 RAGCLDEAYGLIKEMKVKPDAAIWGALLS 474



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 108/249 (43%), Gaps = 26/249 (10%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N+ + +  L +C     +QT   IH QV++ G   +++    ++++Y K  R+  A K F
Sbjct: 296 NAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCGRVEMARKAF 355

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
            ++ E+N +S+   I GY +     EA+ +F+ + R G   N   +  F+ VL +   A 
Sbjct: 356 QKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPN---YITFISVLAACSHAG 412

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN-DCFEEALNFFSQM 233
           L             D   +   A+   F +   VE    + D L    C +EA     +M
Sbjct: 413 LL------------DKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEM 460

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY---VAVALLDLYTKS 290
           +    KP+   +  +L AC     + +A+     + K  +E+D       V L ++Y ++
Sbjct: 461 K---VKPDAAIWGALLSACRIHKNVELAE----ISAKRLFELDATNCGYYVLLSNIYAEA 513

Query: 291 GEISNARRI 299
           G   +  R+
Sbjct: 514 GMWKDVERM 522


>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
 gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
          Length = 640

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 225/579 (38%), Positives = 337/579 (58%), Gaps = 14/579 (2%)

Query: 241 NNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIF 300
           N+  +A +L++C+    +R  +  H   L +   +D  +A  L+DLY   G +S ARR+F
Sbjct: 62  NHNNYATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLF 121

Query: 301 EEMPKK-DVIPWSFMIARYAQTDLSIDAVELFCRMRQ-AFVAPNQFTFVSVLQACATMEG 358
           +EMP + +V  W+ +I  YA+      A+EL+  M     + P+ FT+  VL+ACA +  
Sbjct: 122 DEMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLD 181

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           L  G ++H  V+R    +DVFV   L+D+YAKCG ++ +  +F  +  R+ V WN+MI  
Sbjct: 182 LGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAA 241

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
             Q G   +A+ +   M  E +  T VT  S + A A   AL  G ++H    +  +   
Sbjct: 242 CGQNGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQ 301

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
             +  +L+DMYAK G +T AR++FD +     +SWNAMI G+ MHG +    ++F  M+ 
Sbjct: 302 DKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRMRN 361

Query: 539 RGW-RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHL 597
                P+++TFVGVLSAC++GG++++ +  F  MV  Y I+P ++HYT +V +LG +G  
Sbjct: 362 EAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPMVQHYTCLVDVLGHSGRF 421

Query: 598 DKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIY 657
            +A+ +I+G+  +P   IW ALL  C IH NVE+  L+   +++ EPED   +VLLSNIY
Sbjct: 422 KEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALHKLIELEPEDAGNYVLLSNIY 481

Query: 658 AMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLN 706
           A +  WE+AA            K    SWIE +G  H F  GD SH   + I   LE L 
Sbjct: 482 AQSGKWEEAARVRKLMTNRGLKKIIACSWIELKGKSHGFLVGDASHPRSDEIYEELERLE 541

Query: 707 MKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICV 766
               + GY+PD ++V  +V +DEK   +  HSE+LA+AF L   PP + + + KNLR+C 
Sbjct: 542 GLISQTGYVPDTTSVFHNVEDDEKRNMVRGHSERLAIAFGLISTPPGTKLLVTKNLRVCE 601

Query: 767 DCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           DCH  IK+IS+I QREIIIRDV+R+HHF +G CSC D W
Sbjct: 602 DCHVVIKLISQIEQREIIIRDVNRYHHFVNGECSCKDHW 640



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 167/355 (47%), Gaps = 23/355 (6%)

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFDGLFN--DCF---------------EEALNFFSQM 233
           +A + T L+D ++ CG V  AR++FD + N  + F               E A+  + +M
Sbjct: 97  DAVLATRLVDLYASCGLVSVARRLFDEMPNQGNVFLWNVLIRAYARDGPREAAIELYREM 156

Query: 234 RAVG-FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
            A G  +P+NFT+  VLKAC  L  +   +  H   ++T +  D++V   L+D+Y K G 
Sbjct: 157 LACGSMEPDNFTYPPVLKACAALLDLGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGC 216

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           +  A  +F+    +D + W+ MIA   Q     +A+ L   M    +AP   T VS + A
Sbjct: 217 VDEAWAVFDSTTVRDAVVWNSMIAACGQNGRPAEALALCRNMAAEGIAPTIVTLVSAISA 276

Query: 353 CATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTW 412
            A    L  G ++H    R G  S   +  +L+D+YAK G +  +  LF +   R  ++W
Sbjct: 277 AADAGALPRGRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISW 336

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEE-QVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
           N MI G+   G    A  +F +M  E QV    +T+  VL AC     ++   +V  L V
Sbjct: 337 NAMICGFGMHGHADHACELFRRMRNEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMV 396

Query: 472 KANYDMDVVVAN--ALIDMYAKCGSITDARLVFD-MMNDWNEVSWNAMISGYSMH 523
              Y +  +V +   L+D+    G   +A  V   M+   +   W A+++G  +H
Sbjct: 397 TV-YSIKPMVQHYTCLVDVLGHSGRFKEASDVIKGMLVKPDSGIWGALLNGCKIH 450



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 116/462 (25%), Positives = 198/462 (42%), Gaps = 30/462 (6%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
           +N ++YAT L+SC+ +  ++    +H ++L  G  LD      L+++Y     +  A +L
Sbjct: 61  YNHNNYATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRL 120

Query: 114 FDEMPER-NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGH-ELNPFAFTAFLK---VLV 168
           FDEMP + N   +   I+ Y        A+ L+  +   G  E + F +   LK    L+
Sbjct: 121 FDEMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALL 180

Query: 169 SMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-----------G 217
            +G       V   V +    ++ FV   LID ++ CGCV+ A  VFD            
Sbjct: 181 DLGAGRE---VHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNS 237

Query: 218 LFNDCFE-----EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC 272
           +   C +     EAL     M A G  P   T    + A      +   +  HG   +  
Sbjct: 238 MIAACGQNGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRG 297

Query: 273 YEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFC 332
           +     +  +LLD+Y KSG ++ AR +F+++  +++I W+ MI  +     +  A ELF 
Sbjct: 298 FGSQDKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELFR 357

Query: 333 RMR-QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVS-NALMDVYAK 390
           RMR +A V P+  TFV VL AC     +    ++  L+V V  +  +      L+DV   
Sbjct: 358 RMRNEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPMVQHYTCLVDVLGH 417

Query: 391 CGRMENSVELFAES-PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSS 449
            GR + + ++      K +   W  ++ G      V  A +   K++E + P     Y  
Sbjct: 418 SGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALHKLIELE-PEDAGNYVL 476

Query: 450 VLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAK 491
           +    A     E   +V  L    N  +  ++A + I++  K
Sbjct: 477 LSNIYAQSGKWEEAARVRKLMT--NRGLKKIIACSWIELKGK 516



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 97/188 (51%), Gaps = 10/188 (5%)

Query: 441 PATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARL 500
           P     Y+++LR+C    A+ PG Q+H   + +   +D V+A  L+D+YA CG ++ AR 
Sbjct: 60  PYNHNNYATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARR 119

Query: 501 VFD-MMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG-WRPNNLTFVGVLSACSNG 558
           +FD M N  N   WN +I  Y+  G     ++++  M   G   P+N T+  VL AC+  
Sbjct: 120 LFDEMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACA-- 177

Query: 559 GLLEQG---EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMI 615
            LL+ G   E + + M  ++  +  +     ++ +  + G +D+A  + +    + +V +
Sbjct: 178 ALLDLGAGREVHDRVMRTSWAADVFV--CAGLIDMYAKCGCVDEAWAVFDSTTVRDAV-V 234

Query: 616 WRALLGAC 623
           W +++ AC
Sbjct: 235 WNSMIAAC 242



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/283 (21%), Positives = 112/283 (39%), Gaps = 21/283 (7%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E ++ +Y   L++C    DL     +H +V++     D+F    L+++Y K   + +A  
Sbjct: 163 EPDNFTYPPVLKACAALLDLGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWA 222

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +FD    R+ + + + I     + +  EA+ L   +  EG         + +      G 
Sbjct: 223 VFDSTTVRDAVVWNSMIAACGQNGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGA 282

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF--------- 223
                 +    ++ G  S   + T+L+D ++  G V  AR +FD LF+            
Sbjct: 283 LPRGRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICG 342

Query: 224 -------EEALNFFSQMR-AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
                  + A   F +MR      P++ TF  VL AC     ++ AK      + T Y +
Sbjct: 343 FGMHGHADHACELFRRMRNEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDL-MVTVYSI 401

Query: 276 DLYVA--VALLDLYTKSGEISNARRIFEEM-PKKDVIPWSFMI 315
              V     L+D+   SG    A  + + M  K D   W  ++
Sbjct: 402 KPMVQHYTCLVDVLGHSGRFKEASDVIKGMLVKPDSGIWGALL 444


>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Cucumis sativus]
          Length = 759

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 251/737 (34%), Positives = 391/737 (53%), Gaps = 77/737 (10%)

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +F   P  +   +   ++ Y+      + V LF   H       PF +   +K+    G 
Sbjct: 56  IFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSG- 114

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQ 232
                   A V KLGH  + F+  A++D ++  G V+ AR +F+ +     E  L  ++ 
Sbjct: 115 ----NLFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMA----ERTLADWNS 166

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           M +  +K  N T A VL                          ++    +++  Y K G+
Sbjct: 167 MISGCWKSGNETEAVVL-------------------FNMMPARNIITWTSMVTGYAKMGD 207

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           + +ARR F+EMP++ V+ W+ M + YAQ +   +A+ LF +M +  + P+  T+V  + +
Sbjct: 208 LESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISS 267

Query: 353 CATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME-------------NSV- 398
           C+++    L + I  ++ +  ++ + FV  AL+D++AK G +E             N+V 
Sbjct: 268 CSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVT 327

Query: 399 ------------------ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE-EQ 439
                             ELF   PKR+ V+WN+MI GY Q GE   ++ +F +M+    
Sbjct: 328 WNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMD 387

Query: 440 VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR 499
           +   EVT +SVL AC  + AL+    V  +  + N  + +   N+LI MY+KCGS+ DA 
Sbjct: 388 IQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAH 447

Query: 500 LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGG 559
            +F  M   + VS+N +ISG++ +G   E +K+   M++ G  P+++T++GVL+ACS+ G
Sbjct: 448 RIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAG 507

Query: 560 LLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRAL 619
           LL +G+  FKS+ A     P ++HY  MV LLGRAG LD+A  LI+ +P +P   ++ +L
Sbjct: 508 LLNEGKNVFKSIQA-----PTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSL 562

Query: 620 LGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------S 668
           L A  IH  V +G L+A  + + EP++   +VLLSNIYA    WE               
Sbjct: 563 LNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLK 622

Query: 669 KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVRED 728
           K  G+SW+E +G VH F  GD SH     I  +L  L  K ++ G++ D S  LRDV E+
Sbjct: 623 KSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMKRVGFVADKSCALRDVEEE 682

Query: 729 EKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDV 788
           EKE  L  HSEKLA+ FAL      + IR++KNLRIC+DCHTAIK+ISK+  REI++RD 
Sbjct: 683 EKEEMLGTHSEKLAICFALLISEVGTTIRVVKNLRICLDCHTAIKMISKLEGREIVVRDN 742

Query: 789 HRFHHFQDGCCSCGDFW 805
           +RFH F +G CSC D+W
Sbjct: 743 NRFHCFSEGMCSCHDYW 759



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 121/476 (25%), Positives = 201/476 (42%), Gaps = 92/476 (19%)

Query: 79  HCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQF 138
           H  VLK G+  D F  N +L++Y K  ++  A  LF++M ER    + + I G   S   
Sbjct: 118 HAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNE 177

Query: 139 VEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTAL 198
            EAV LF+ +                            P             N    T++
Sbjct: 178 TEAVVLFNMM----------------------------PA-----------RNIITWTSM 198

Query: 199 IDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNN 242
           +  ++  G +E AR+ FD +                  +C +EALN F QM   G  P++
Sbjct: 199 VTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDD 258

Query: 243 FTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL---------------- 286
            T+   + +C  +    +A S      +    ++ +V  ALLD+                
Sbjct: 259 TTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDE 318

Query: 287 ----------------YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVEL 330
                           YT+ G++S AR +F+ MPK+DV+ W+ MIA YAQ   S  ++EL
Sbjct: 319 LGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIEL 378

Query: 331 FCRMRQAF-VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYA 389
           F  M     + P++ T  SVL AC  +  L L   +  +V    +   +   N+L+ +Y+
Sbjct: 379 FKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYS 438

Query: 390 KCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSS 449
           KCG + ++  +F     R+ V++NT+I G+   G   +A+ +   M EE +    VTY  
Sbjct: 439 KCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIG 498

Query: 450 VLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMM 505
           VL AC+    L  G  V     K+     V     ++D+  + G + +A+++   M
Sbjct: 499 VLTACSHAGLLNEGKNV----FKSIQAPTVDHYACMVDLLGRAGELDEAKMLIQSM 550


>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
          Length = 830

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 216/561 (38%), Positives = 323/561 (57%), Gaps = 46/561 (8%)

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y + G+++ AR +FEE+  K  + W+ MI+ Y Q+ +  DA ELF RM    V  ++FTF
Sbjct: 242 YVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTF 301

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGL----LSDVFVSNALMDVYAKCGRMENSVELFA 402
            SVL ACA       G  +H  ++R+       + + V+NAL+ +Y+K G++  +  +F 
Sbjct: 302 TSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFD 361

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKA---------------MIM---------------- 431
               ++ V+WNT++ GY+  G + KA               M+M                
Sbjct: 362 TMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKL 421

Query: 432 FSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAK 491
           F++M  E V   + TY+  + AC  L AL+ G Q+H   V+  ++      NAL+ MYAK
Sbjct: 422 FNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAK 481

Query: 492 CGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGV 551
           CG++ DARLVF +M + + VSWNAMIS    HG   E L++FD M   G  P+ ++F+ +
Sbjct: 482 CGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTI 541

Query: 552 LSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQP 611
           L+AC++ GL+++G  YF+SM  ++GI P  +HY  ++ LLGR+G + +A  LI+ +PF+P
Sbjct: 542 LTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEP 601

Query: 612 SVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA---- 667
           +  IW A+L  C  + ++E G  +A  +    P+ + T++LLSN Y+ A  W  AA    
Sbjct: 602 TPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRK 661

Query: 668 -------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSA 720
                   KEPG SWIE    +H F  GDT H +   +   LE +  + RK GY+PD   
Sbjct: 662 LMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKF 721

Query: 721 VLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQ 780
           VL D+   EKE  L+ HSEKLA+ F L K+PP + + ++KNLRIC DCHTA+  +SK V 
Sbjct: 722 VLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPGATVTVLKNLRICGDCHTAMMFMSKAVG 781

Query: 781 REIIIRDVHRFHHFQDGCCSC 801
           REI++RDV RFHHF+DG CSC
Sbjct: 782 REIVVRDVRRFHHFKDGECSC 802



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 187/367 (50%), Gaps = 48/367 (13%)

Query: 280 AVALLDLYTKSGEISNARRIFEEMP--KKDVIPWSFMIARYAQTDLSIDAVELF-CRMRQ 336
           A +L+     +G + +A   F+ +P  ++D +  + M++ +A+  L+  AV +F   +  
Sbjct: 95  ATSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGS 154

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGN--QIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
             + P+ ++F +++ A   M  L   +  Q+H  V++ G  + + VSNAL+ +Y KC   
Sbjct: 155 GSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTP 214

Query: 395 E---NSVELFAESPKRNHVTWNTMIVGYVQLGEV-----------GK------AMI---- 430
           E   ++ ++  E P ++ +TW TM+VGYV+ G+V           GK      AMI    
Sbjct: 215 EASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYV 274

Query: 431 ----------MFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVH--CLTVKANY--D 476
                     +F +M+ E+VP  E T++SVL ACA+      G  VH   + ++ N+  +
Sbjct: 275 QSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPE 334

Query: 477 MDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLM 536
             + V NAL+ +Y+K G I  A+ +FD MN  + VSWN ++SGY   G   + ++VF +M
Sbjct: 335 AALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVM 394

Query: 537 QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGH 596
             +    N+L+++ ++S   +GGL E     F  M A   ++PC   Y   ++  G  G 
Sbjct: 395 PYK----NDLSWMVMVSGYVHGGLSEDALKLFNQMRAE-DVKPCDYTYAGAIAACGELGA 449

Query: 597 LDKAAKL 603
           L    +L
Sbjct: 450 LKHGRQL 456



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 134/514 (26%), Positives = 213/514 (41%), Gaps = 96/514 (18%)

Query: 105 NRLPDATKLFDEMP--ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNP--FAF 160
            RL DA   FD +P   R+T+     +  +  +S    AV +F  L   G  L P  ++F
Sbjct: 106 GRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSG-SLRPDDYSF 164

Query: 161 TAFLKVLVSMG--WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVC------------- 205
           TA +  +  M    A  C  +   V K G  +   V  ALI  +  C             
Sbjct: 165 TALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVL 224

Query: 206 ---------------------GCVEFARKVF---DGLFNDCFE-------------EALN 228
                                G V  AR VF   DG F+  +              +A  
Sbjct: 225 DEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFE 284

Query: 229 FFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT----CYEMDLYVAVALL 284
            F +M +     + FTF  VL AC         KS HG  ++       E  L V  AL+
Sbjct: 285 LFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALV 344

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWS-------------------------------F 313
            LY+K G+I  A+RIF+ M  KDV+ W+                                
Sbjct: 345 TLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMV 404

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
           M++ Y    LS DA++LF +MR   V P  +T+   + AC  +  L  G Q+H+ +V+ G
Sbjct: 405 MVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCG 464

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
             +     NAL+ +YAKCG + ++  +F   P  + V+WN MI    Q G   +A+ +F 
Sbjct: 465 FEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFD 524

Query: 434 KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAK 491
           +M+ E +    +++ ++L AC     ++ G   +  ++K ++ +     +   LID+  +
Sbjct: 525 QMVAEGIDPDRISFLTILTACNHAGLVDEGFH-YFESMKRDFGISPGEDHYARLIDLLGR 583

Query: 492 CGSITDAR-LVFDMMNDWNEVSWNAMISGYSMHG 524
            G I +AR L+  M  +     W A++SG   +G
Sbjct: 584 SGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNG 617



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 125/571 (21%), Positives = 220/571 (38%), Gaps = 139/571 (24%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLP---DATKLFDEMPERNTISFVTT------ 128
           +HC VLK G    L  +N L+ +Y+K +      DA K+ DEMP+++ +++ T       
Sbjct: 185 LHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVR 244

Query: 129 -------------------------IQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAF 163
                                    I GY  S    +A  LF  +  E   L+ F FT+ 
Sbjct: 245 RGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSV 304

Query: 164 LKVLVSMGWAELCPCVFACVYKLGH----DSNAFVGTALIDAFSVCGCVEFARKVFDGLF 219
           L    + G+      V   + +L      ++   V  AL+  +S  G +  A+++FD + 
Sbjct: 305 LSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMN 364

Query: 220 ----------------NDCF-------------------------------EEALNFFSQ 232
                           + C                                E+AL  F+Q
Sbjct: 365 LKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQ 424

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           MRA   KP ++T+A  + AC  L  ++  +  H   ++  +E       ALL +Y K G 
Sbjct: 425 MRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGA 484

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           +++AR +F  MP  D + W+ MI+   Q     +A+ELF +M    + P++ +F+++L A
Sbjct: 485 VNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTA 544

Query: 353 CATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTW 412
           C                   GL+ + F               E+    F  SP  +H   
Sbjct: 545 CN----------------HAGLVDEGF------------HYFESMKRDFGISPGEDHYAR 576

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV--HCLT 470
              ++G  + G +G+A  +   M  E  P+    + ++L  C +   +E G         
Sbjct: 577 LIDLLG--RSGRIGEARDLIKTMPFEPTPS---IWEAILSGCRTNGDMEFGAYAADQLFR 631

Query: 471 VKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND----------WNEVS--WNAMIS 518
           +   +D   ++   L + Y+  G   DA  V  +M D          W EV    +  + 
Sbjct: 632 MIPQHDGTYIL---LSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLV 688

Query: 519 GYSMHGLSAEVLKVFDL----MQQRGWRPNN 545
           G + H  + EV +  ++    M++ G+ P+ 
Sbjct: 689 GDTKHPEAQEVYQFLEVIGARMRKLGYVPDT 719



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/286 (22%), Positives = 123/286 (43%), Gaps = 43/286 (15%)

Query: 381 SNALMDVYAKCGRMENSVELFAESP--KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE 438
           + +L+   A  GR+ ++   F   P  +R+ V  N M+  + +      A+ +F  +L  
Sbjct: 95  ATSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGS 154

Query: 439 -QVPATEVTYSSVLRACASLAALEPG--MQVHCLTVKANYDMDVVVANALIDMYAKC--- 492
             +   + ++++++ A   +  L      Q+HC  +K+     + V+NALI +Y KC   
Sbjct: 155 GSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTP 214

Query: 493 -------------------------------GSITDARLVFDMMNDWNEVSWNAMISGYS 521
                                          G +  AR VF+ ++   +V WNAMISGY 
Sbjct: 215 EASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYV 274

Query: 522 MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV---ANYGIE 578
             G+ A+  ++F  M       +  TF  VLSAC+N G    G++    ++    N+  E
Sbjct: 275 QSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPE 334

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACI 624
             +    ++V+L  + G +  A ++ + +  +  V+ W  +L   I
Sbjct: 335 AALPVNNALVTLYSKGGKIVIAKRIFDTMNLK-DVVSWNTILSGYI 379



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 27/108 (25%), Positives = 50/108 (46%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
           ++YA ++ +C +   L+    +H  +++ G      A N LL +Y K   + DA  +F  
Sbjct: 435 YTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLV 494

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFL 164
           MP  +++S+   I          EA+ LF  +  EG + +  +F   L
Sbjct: 495 MPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTIL 542


>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 953

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 242/657 (36%), Positives = 363/657 (55%), Gaps = 65/657 (9%)

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNN 242
           V KLG DS+ +V   LI+ FSVC  +  A +VF            N  S + +V +    
Sbjct: 239 VLKLGFDSDVYVRNTLINCFSVCSNMTDACRVF------------NESSVLDSVSWNS-- 284

Query: 243 FTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEE 302
                +L   + +  +  AK  +        E  +  + +++ L+   G +  A ++F+E
Sbjct: 285 -----ILAGYIEIGNVEEAKHIY----HQMPERSIIASNSMIVLFGMRGLVVEACKLFDE 335

Query: 303 MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG 362
           M +KD++ WS +IA + Q ++  +A+  F  M +  V  ++   VS L ACA +  +++G
Sbjct: 336 MLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMG 395

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
             IHSL +++G  S + + NAL+ +Y+KCG +  + +LF E+   + ++WN+MI GY++ 
Sbjct: 396 KLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKC 455

Query: 423 GEVGKAMIMFSKMLEEQV-------------------------------PATEVTYSSVL 451
             V  A  +F  M E+ V                                  E T  SV+
Sbjct: 456 NLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVI 515

Query: 452 RACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEV 511
            ACA LAALE G  VH    +    ++V++   LIDMY KCG +  A  VF  M +    
Sbjct: 516 SACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGIS 575

Query: 512 SWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSM 571
           +WNA+I G +M+GL    L +F  M++    PN +TF+GVL AC + GL+++G+ +F SM
Sbjct: 576 TWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSM 635

Query: 572 VANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEI 631
           + ++ I+P ++HY  MV LLGRAG L +A +L+  +P  P V  W ALLGAC  H + E+
Sbjct: 636 IHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEM 695

Query: 632 GRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQG 680
           GR   + +++ +P+ +  HVLLSNIYA    W+               K PG S IE  G
Sbjct: 696 GRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANG 755

Query: 681 MVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEK 740
           ++H F AGD +H DM+ I  ML  + MK +  GY PD++ VL DV E+EKE  L+ HSEK
Sbjct: 756 VIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDVDEEEKESTLFRHSEK 815

Query: 741 LALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDG 797
           LA+AF L  + P +PIRI+KNLRIC DCHTA K+ISK   R+I++RD HRFHHF+ G
Sbjct: 816 LAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVVRDRHRFHHFEQG 872



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 133/507 (26%), Positives = 236/507 (46%), Gaps = 60/507 (11%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           ++++Y   +Q+C        A  +H  VLK G   D++  N L+N +   + + DA ++F
Sbjct: 212 DNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVF 271

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           +E    +++S+ + + GY       EA  ++       H++   +  A   ++V  G   
Sbjct: 272 NESSVLDSVSWNSILAGYIEIGNVEEAKHIY-------HQMPERSIIASNSMIVLFGMRG 324

Query: 175 LCPCVFAC-VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQM 233
           L   V AC ++    + +    +ALI  F                 N+ +EEA+  F  M
Sbjct: 325 L--VVEACKLFDEMLEKDMVTWSALIACFQQ---------------NEMYEEAIRTFVGM 367

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
             +G   +       L AC  L  + + K  H  +LK   E  + +  AL+ +Y+K G+I
Sbjct: 368 HKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDI 427

Query: 294 -------------------------------SNARRIFEEMPKKDVIPWSFMIARYAQTD 322
                                           NA+ IF+ MP+KDV+ WS MI+ YAQ D
Sbjct: 428 MVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQND 487

Query: 323 LSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSN 382
           L  + + LF  M+ +   P++ T VSV+ ACA +  L+ G  +H+ + R GL  +V +  
Sbjct: 488 LFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGT 547

Query: 383 ALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPA 442
            L+D+Y KCG +E ++E+F    ++   TWN +I+G    G V  ++ MFS M +  V  
Sbjct: 548 TLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTP 607

Query: 443 TEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDARL 500
            E+T+  VL AC  +  ++ G Q H  ++  ++ +   V +   ++D+  + G + +A  
Sbjct: 608 NEITFMGVLGACRHMGLVDEG-QHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEE 666

Query: 501 VFDMMNDWNEV-SWNAMISGYSMHGLS 526
           + + M    +V +W A++     HG S
Sbjct: 667 LLNRMPMTPDVATWGALLGACKKHGDS 693



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/451 (22%), Positives = 198/451 (43%), Gaps = 54/451 (11%)

Query: 39  CSNSTTTPITFSVSE-FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVL 97
           CSN T     F+ S   +S S+ + L   I+  +++ A  I+ Q+ ++     + A+N +
Sbjct: 261 CSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERS----IIASNSM 316

Query: 98  LNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNP 157
           + ++     + +A KLFDEM E++ +++   I  +  +  + EA+  F  +H+ G  ++ 
Sbjct: 317 IVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDE 376

Query: 158 FAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG 217
               + L    ++    +   + +   K+G +S   +  ALI  +S CG +  ARK+FD 
Sbjct: 377 VVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDE 436

Query: 218 LF-----------------------------------------------NDCFEEALNFF 230
            +                                               ND F+E L  F
Sbjct: 437 AYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALF 496

Query: 231 SQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKS 290
            +M+  GFKP+  T   V+ AC  L  +   K  H    +    +++ +   L+D+Y K 
Sbjct: 497 QEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKC 556

Query: 291 GEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVL 350
           G +  A  +F  M +K +  W+ +I   A   L   ++++F  M++  V PN+ TF+ VL
Sbjct: 557 GCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVL 616

Query: 351 QACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNH 409
            AC  M  +D G +  +S++    +  +V     ++D+  + G+++ + EL    P    
Sbjct: 617 GACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPD 676

Query: 410 V-TWNTMIVGYVQLGEVGKAMIMFSKMLEEQ 439
           V TW  ++    + G+      +  K++E Q
Sbjct: 677 VATWGALLGACKKHGDSEMGRRVGRKLIELQ 707



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 73/330 (22%), Positives = 155/330 (46%), Gaps = 45/330 (13%)

Query: 318 YAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD 377
           Y QT+    A  L+  M   ++  + +T+  ++QAC+         Q+H+ V+++G  SD
Sbjct: 188 YIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSD 247

Query: 378 VFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
           V+V N L++ ++ C  M ++  +F ES   + V+WN+++ GY+++G V +A  ++ +M E
Sbjct: 248 VYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPE 307

Query: 438 EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITD 497
                                                    ++ +N++I ++   G + +
Sbjct: 308 RS---------------------------------------IIASNSMIVLFGMRGLVVE 328

Query: 498 ARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSN 557
           A  +FD M + + V+W+A+I+ +  + +  E ++ F  M + G   + +  V  LSAC+N
Sbjct: 329 ACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACAN 388

Query: 558 GGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWR 617
             ++  G+    S+    G E  I    +++ +  + G +  A KL +   +   ++ W 
Sbjct: 389 LLVVNMGK-LIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDE-AYLLDLISWN 446

Query: 618 ALLGACIIHNNVEIGRLSAQHILDFEPEDE 647
           +++   +  N V+    +A+ I D  PE +
Sbjct: 447 SMISGYLKCNLVD----NAKAIFDSMPEKD 472


>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Cucumis sativus]
          Length = 759

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 251/737 (34%), Positives = 391/737 (53%), Gaps = 77/737 (10%)

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +F   P  +   +   ++ Y+      + V LF   H       PF +   +K+    G 
Sbjct: 56  IFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSG- 114

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQ 232
                   A V KLGH  + F+  A++D ++  G V+ AR +F+ +     E  L  ++ 
Sbjct: 115 ----NMFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMA----ERTLADWNS 166

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           M +  +K  N T A VL                          ++    +++  Y K G+
Sbjct: 167 MISGCWKSGNETEAVVL-------------------FNMMPARNIITWTSMVTGYAKMGD 207

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           + +ARR F+EMP++ V+ W+ M + YAQ +   +A+ LF +M +  + P+  T+V  + +
Sbjct: 208 LESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISS 267

Query: 353 CATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME-------------NSV- 398
           C+++    L + I  ++ +  ++ + FV  AL+D++AK G +E             N+V 
Sbjct: 268 CSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVT 327

Query: 399 ------------------ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE-EQ 439
                             ELF   PKR+ V+WN+MI GY Q GE   ++ +F +M+    
Sbjct: 328 WNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMD 387

Query: 440 VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR 499
           +   EVT +SVL AC  + AL+    V  +  + N  + +   N+LI MY+KCGS+ DA 
Sbjct: 388 IQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAH 447

Query: 500 LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGG 559
            +F  M   + VS+N +ISG++ +G   E +K+   M++ G  P+++T++GVL+ACS+ G
Sbjct: 448 RIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAG 507

Query: 560 LLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRAL 619
           LL +G+  FKS+ A     P ++HY  MV LLGRAG LD+A  LI+ +P +P   ++ +L
Sbjct: 508 LLNEGKNVFKSIQA-----PTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSL 562

Query: 620 LGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------S 668
           L A  IH  V +G L+A  + + EP++   +VLLSNIYA    WE               
Sbjct: 563 LNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLK 622

Query: 669 KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVRED 728
           K  G+SW+E +G VH F  GD SH     I  +L  L  K ++ G++ D S  LRDV E+
Sbjct: 623 KSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMKRVGFVADKSCALRDVEEE 682

Query: 729 EKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDV 788
           EKE  L  HSEKLA+ FAL      + IR++KNLRIC+DCHTAIK+ISK+  REI++RD 
Sbjct: 683 EKEEMLGTHSEKLAICFALLISEVGTTIRVVKNLRICLDCHTAIKMISKLEGREIVVRDN 742

Query: 789 HRFHHFQDGCCSCGDFW 805
           +RFH F +G CSC D+W
Sbjct: 743 NRFHCFSEGMCSCHDYW 759



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 121/476 (25%), Positives = 201/476 (42%), Gaps = 92/476 (19%)

Query: 79  HCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQF 138
           H  VLK G+  D F  N +L++Y K  ++  A  LF++M ER    + + I G   S   
Sbjct: 118 HAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNE 177

Query: 139 VEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTAL 198
            EAV LF+ +                            P             N    T++
Sbjct: 178 TEAVVLFNMM----------------------------PA-----------RNIITWTSM 198

Query: 199 IDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNN 242
           +  ++  G +E AR+ FD +                  +C +EALN F QM   G  P++
Sbjct: 199 VTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDD 258

Query: 243 FTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL---------------- 286
            T+   + +C  +    +A S      +    ++ +V  ALLD+                
Sbjct: 259 TTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDE 318

Query: 287 ----------------YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVEL 330
                           YT+ G++S AR +F+ MPK+DV+ W+ MIA YAQ   S  ++EL
Sbjct: 319 LGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIEL 378

Query: 331 FCRMRQAF-VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYA 389
           F  M     + P++ T  SVL AC  +  L L   +  +V    +   +   N+L+ +Y+
Sbjct: 379 FKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYS 438

Query: 390 KCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSS 449
           KCG + ++  +F     R+ V++NT+I G+   G   +A+ +   M EE +    VTY  
Sbjct: 439 KCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIG 498

Query: 450 VLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMM 505
           VL AC+    L  G  V     K+     V     ++D+  + G + +A+++   M
Sbjct: 499 VLTACSHAGLLNEGKNV----FKSIQAPTVDHYACMVDLLGRAGELDEAKMLIQSM 550


>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 828

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 265/812 (32%), Positives = 412/812 (50%), Gaps = 77/812 (9%)

Query: 61  TSLQSCIQNDDLQTAMTIHCQVLKKG--NCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           +SLQ+C    +L+    +HC +LKKG  N   L A  V +  +  LN   +A K  DE  
Sbjct: 27  SSLQTCKTLIELKQ---LHCNMLKKGVFNINKLIAACVQMGTHESLNYALNAFKE-DEGT 82

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHR-------EGHELNPFAFTAFLKVLVSMG 171
           + +  +  T I+GY  S    EA+  F  LH          +   PF  +A  K+   M 
Sbjct: 83  KCSLYTCNTLIRGYAASGLCKEAI--FIYLHMIIVMGIVPDNFTFPFLLSACSKI---MA 137

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN----------- 220
           ++E    V   V K+G   + FV  +LI  ++ CG V+  RKVFD +             
Sbjct: 138 FSEGVQ-VHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLIN 196

Query: 221 -----DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
                +  +EA+  F +M  VG +PN  T    + AC  L  + + K       +   + 
Sbjct: 197 GYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKS 256

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
           +  V  ALLD+Y K G++   R IF+E   K+++ ++ +++ Y Q  L+ + + +   M 
Sbjct: 257 NTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEML 316

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR-- 393
           Q    P++ T +S + ACA +  L +G   H+ V R GL     +SNA++D+Y KCG+  
Sbjct: 317 QKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKRE 376

Query: 394 -----------------------------MENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
                                        +E ++ +F E P+ N V+WNTMI   VQ   
Sbjct: 377 AACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASM 436

Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA 484
             +A+ +  +M  + +    VT   +  AC  L AL+    ++    K +  +D+ +  A
Sbjct: 437 FEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTA 496

Query: 485 LIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPN 544
           L+DM+++CG   +A  VF+ M   +  +W A I   ++ G +   +++FD M ++  + +
Sbjct: 497 LVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKAD 556

Query: 545 NLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLI 604
           +  FV +L+A S+GG ++QG   F +M   +G+ P I HY  MV LLGRAG L++A  L+
Sbjct: 557 DFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLM 616

Query: 605 EGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW- 663
           + +P +P+ +IW + L AC  H NVE    + + I    PE    HVLLSNIYA A  W 
Sbjct: 617 KSMPIKPNDVIWGSFLAACRKHKNVEFANYADEKITQLAPEKVGIHVLLSNIYASAGKWN 676

Query: 664 ----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAG 713
                     EK   K  G S IE  G++  F +GD SH +   I  ML+ +N +  + G
Sbjct: 677 DVARVRLQMKEKGFQKVAGSSSIEVHGLIREFTSGDESHTENAQIGLMLQEINCRISQVG 736

Query: 714 YIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIK 773
           Y+PD + VL DV E EKE  L  HSEKLA+A+ L       PIR++KNLR+C DCH+  K
Sbjct: 737 YVPDTTNVLVDVDEQEKEHLLSRHSEKLAMAYGLINTGKGIPIRVVKNLRMCSDCHSFAK 796

Query: 774 IISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           ++SK+  REI +RD +R+H F++G CSC DFW
Sbjct: 797 LVSKLYGREITVRDNNRYHFFKEGFCSCRDFW 828



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/413 (21%), Positives = 172/413 (41%), Gaps = 49/413 (11%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N  +   ++ +C +  DL+    +   + + G   +    N LL++Y+K   +    +
Sbjct: 220 EPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVRE 279

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +FDE  ++N + + T +  Y       E + +   + ++G   +     + +     +G 
Sbjct: 280 IFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGD 339

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDC---------- 222
             +     A V++ G +    +  A+ID +  CG  E A KVFD + N            
Sbjct: 340 LSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAG 399

Query: 223 -------------------------------------FEEALNFFSQMRAVGFKPNNFTF 245
                                                FEEA++   +M+  G K +  T 
Sbjct: 400 LVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTM 459

Query: 246 AFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPK 305
             +  AC  L  + +AK  +    K    +D+ +  AL+D++++ G+  NA R+FE M K
Sbjct: 460 VGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEK 519

Query: 306 KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
           +DV  W+  I   A    +  A+ELF  M +  V  + F FV++L A +    +D G Q+
Sbjct: 520 RDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQL 579

Query: 366 HSLVVRV-GLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMI 416
              + ++ G+   +     ++D+  + G +E + +L    P K N V W + +
Sbjct: 580 FWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMPIKPNDVIWGSFL 632


>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
 gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
 gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
 gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 722

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 226/625 (36%), Positives = 342/625 (54%), Gaps = 48/625 (7%)

Query: 229 FFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYT 288
           F+ ++R VG + + F+F  +LKA   +  +      HG A K     D +V    +D+Y 
Sbjct: 98  FYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYA 157

Query: 289 KSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVS 348
             G I+ AR +F+EM  +DV+ W+ MI RY +  L  +A +LF  M+ + V P++    +
Sbjct: 158 SCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCN 217

Query: 349 VLQACATMEGLDLGNQIHSLVV-------------------------------RVGLLSD 377
           ++ AC     +     I+  ++                               R   + +
Sbjct: 218 IVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRN 277

Query: 378 VFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
           +FVS A++  Y+KCGR++++  +F ++ K++ V W TMI  YV+     +A+ +F +M  
Sbjct: 278 LFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCC 337

Query: 438 EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITD 497
             +    V+  SV+ ACA+L  L+    VH        + ++ + NALI+MYAKCG +  
Sbjct: 338 SGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDA 397

Query: 498 ARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSN 557
            R VF+ M   N VSW++MI+  SMHG +++ L +F  M+Q    PN +TFVGVL  CS+
Sbjct: 398 TRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSH 457

Query: 558 GGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWR 617
            GL+E+G+  F SM   Y I P +EHY  MV L GRA  L +A ++IE +P   +V+IW 
Sbjct: 458 SGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWG 517

Query: 618 ALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKA 666
           +L+ AC IH  +E+G+ +A+ IL+ EP+ +   VL+SNIYA  + W           EK 
Sbjct: 518 SLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKN 577

Query: 667 ASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVR 726
             KE GLS I+  G  H F  GD  H   N I   L+ +  K + AGY+PD  +VL DV 
Sbjct: 578 VFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVE 637

Query: 727 EDEKERYLWVHSEKLALAFALFKMPPSSP------IRIIKNLRICVDCHTAIKIISKIVQ 780
           E+EK+  +  HSEKLAL F L              IRI+KNLR+C DCH   K++SK+ +
Sbjct: 638 EEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYE 697

Query: 781 REIIIRDVHRFHHFQDGCCSCGDFW 805
           REII+RD  RFH +++G CSC D+W
Sbjct: 698 REIIVRDRTRFHCYKNGLCSCRDYW 722



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 113/465 (24%), Positives = 218/465 (46%), Gaps = 50/465 (10%)

Query: 110 ATKLFDEMPER-NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLV 168
           A  +F  +P    +I F   ++  + SS+    +  +  +   G  L+ F+F   LK + 
Sbjct: 63  ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122

Query: 169 SMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FND 221
            +        +    +K+    + FV T  +D ++ CG + +AR VFD +       +N 
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182

Query: 222 CFE---------EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC 272
             E         EA   F +M+     P+      ++ AC     +R  ++ +   ++  
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND 242

Query: 273 YEMD-------------------------------LYVAVALLDLYTKSGEISNARRIFE 301
             MD                               L+V+ A++  Y+K G + +A+ IF+
Sbjct: 243 VRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFD 302

Query: 302 EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL 361
           +  KKD++ W+ MI+ Y ++D   +A+ +F  M  + + P+  +  SV+ ACA +  LD 
Sbjct: 303 QTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDK 362

Query: 362 GNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQ 421
              +HS +   GL S++ ++NAL+++YAKCG ++ + ++F + P+RN V+W++MI     
Sbjct: 363 AKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSM 422

Query: 422 LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHC-LTVKANYDMDVV 480
            GE   A+ +F++M +E V   EVT+  VL  C+    +E G ++   +T + N    + 
Sbjct: 423 HGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLE 482

Query: 481 VANALIDMYAKCGSITDARLVFDMMN-DWNEVSWNAMISGYSMHG 524
               ++D++ +   + +A  V + M    N V W +++S   +HG
Sbjct: 483 HYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHG 527



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 53/119 (44%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           + +C     L  A  +H  +   G   +L   N L+N+Y K   L     +F++MP RN 
Sbjct: 351 ISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNV 410

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFA 181
           +S+ + I   ++  +  +A+ LF+ + +E  E N   F   L      G  E    +FA
Sbjct: 411 VSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFA 469


>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 624

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 236/611 (38%), Positives = 345/611 (56%), Gaps = 58/611 (9%)

Query: 247 FVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKS--GEISNARRIFEEMP 304
           F L++C  ++ I   K  H   + T   +    A  LL +   S  G +S A ++F+++P
Sbjct: 20  FSLESCKSMNQI---KQTHAHLITTGLILHPITANKLLKVLIASSFGSLSYAHQLFDQIP 76

Query: 305 KKDVIPWSFMIARYAQTDLSI-DAVELFCRM-RQAFVAPNQFTFVSVLQACATMEGLDLG 362
           K DV  ++ MI  +A    S  +++ +F  M R +   PN++TFV V +AC    G+  G
Sbjct: 77  KPDVFIYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEG 136

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAK-------------------------------C 391
            QI    +++GL S++FV+NA++ +YA                                 
Sbjct: 137 EQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGS 196

Query: 392 GRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVL 451
           G +  + E+F E  +R+ V+W T+I GYVQ+G   +A+ +F +ML+   P  E T +S L
Sbjct: 197 GEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASAL 256

Query: 452 RACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFD-----MMN 506
            ACA+L AL+ G  +H    K+   M+  +  +L+DMYAKCG I  A  VF       + 
Sbjct: 257 AACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLK 316

Query: 507 DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEA 566
            W    WNAMI GY+MHG S E + +F+ M+     PN +TFV +L+ACS+G L+E+G  
Sbjct: 317 VW---PWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRG 373

Query: 567 YFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH 626
           YFKSM ++YGIEP IEHY  MV LLGR+G L +A + +  +P  P   IW ALLGAC IH
Sbjct: 374 YFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIH 433

Query: 627 NNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSW 675
            ++E G+   + I + + +    HVLL+N+Y+ +  W++A +           K PG S 
Sbjct: 434 KDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSS 493

Query: 676 IENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDV-REDEKERYL 734
           IE  G+ H F  GD SH     +   L+ +  K + AGY+P+   VL D+  E++KE  L
Sbjct: 494 IELNGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLKNAGYVPEFGEVLLDIDDEEDKETAL 553

Query: 735 WVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHF 794
             HSEKLA+AF L   PP + IRI+KNLR+C DCH A K ISK+ +REII+RD  R+HHF
Sbjct: 554 SKHSEKLAIAFGLINTPPGTAIRIVKNLRVCADCHEATKFISKVYKREIIVRDRIRYHHF 613

Query: 795 QDGCCSCGDFW 805
           +DG CSC D+W
Sbjct: 614 KDGFCSCKDYW 624



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 104/410 (25%), Positives = 174/410 (42%), Gaps = 58/410 (14%)

Query: 62  SLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYV--KLNRLPDATKLFDEMPE 119
           SL+SC   + ++     H  ++  G  L     N LL V +      L  A +LFD++P+
Sbjct: 21  SLESCKSMNQIKQT---HAHLITTGLILHPITANKLLKVLIASSFGSLSYAHQLFDQIPK 77

Query: 120 RNTISFVTTIQGYTV--SSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
            +   + T I+ + V  +S         S +   G   N + F    K   +        
Sbjct: 78  PDVFIYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGE 137

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--------------------- 216
            +     K+G +SN FV  A+I  ++  G V+ AR+VFD                     
Sbjct: 138 QIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSG 197

Query: 217 ------GLFND--------------------CFEEALNFFSQMRAVGFKPNNFTFAFVLK 250
                  +F++                    CF+EAL+ F +M   G  PN FT A  L 
Sbjct: 198 EIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALA 257

Query: 251 ACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIF--EEMPKKDV 308
           AC  L  +   +  H    K+  +M+  +  +LLD+Y K GEI  A ++F  E   K  V
Sbjct: 258 ACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKV 317

Query: 309 IPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQIHS 367
            PW+ MI  YA    S +A++LF +M+   V+PN+ TFV++L AC+  + ++ G     S
Sbjct: 318 WPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKS 377

Query: 368 LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT-WNTMI 416
           +    G+  ++     ++D+  + G ++ + E     P     T W  ++
Sbjct: 378 MASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALL 427


>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Cucumis sativus]
          Length = 679

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 229/624 (36%), Positives = 336/624 (53%), Gaps = 47/624 (7%)

Query: 228 NFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLY 287
           N    + A G  P   ++A V +   GL+ +++    H   L    +    V   ++  Y
Sbjct: 57  NLLQPLSAPG-PPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFY 115

Query: 288 TKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFV 347
             SG+I ++  +F  + +   + ++ MI  YA+   +   V  +  M       + FTF 
Sbjct: 116 ASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFP 175

Query: 348 SVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS---------- 397
            VL++   +  + +G  +H L++R+GL  D++V+ +L+ +Y KCG + ++          
Sbjct: 176 FVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIR 235

Query: 398 ---------------------VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML 436
                                + +F   P RN V+W TMI GY Q G   +A+ +F +M+
Sbjct: 236 DVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMV 295

Query: 437 EEQ--VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGS 494
           +E   V    VT  SVL ACA L+ LE G Q+H L  +   + +  V  AL  MYAKCGS
Sbjct: 296 KEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGS 355

Query: 495 ITDARLVFDMMN--DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL 552
           + DAR  FD +N  + N ++WN MI+ Y+ +G   + +  F  M Q G +P+++TF G+L
Sbjct: 356 LVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLL 415

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
           S CS+ GL++ G  YF  M   Y I P +EHY  +  LLGRAG L +A+KL+  +P    
Sbjct: 416 SGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAG 475

Query: 613 VMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE-------- 664
             IW +LL AC  H N+E+   +A+ +   EPE+   +VLLSN+YA A  W+        
Sbjct: 476 PSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAI 535

Query: 665 ---KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAV 721
              +   K PG SWIE  G  H F  GDTSH     I   LE L  K + AGY PD S V
Sbjct: 536 VKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYV 595

Query: 722 LRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQR 781
           L D+ E+EKE  L  HSEKLA+AF +   P  + +R+ KNLRIC DCHTA+  IS+I  R
Sbjct: 596 LHDISEEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGR 655

Query: 782 EIIIRDVHRFHHFQDGCCSCGDFW 805
           E+I+RD++RFHHF+ GCCSCGD+W
Sbjct: 656 EVIVRDINRFHHFKGGCCSCGDYW 679



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 215/463 (46%), Gaps = 59/463 (12%)

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D +P  ++  F  +I   T+S+       L   L   G      ++    + L  +   +
Sbjct: 32  DTVPPPSSPPFKCSISPLTISATLQN---LLQPLSAPGPP-PILSYAPVFQFLTGLNMLK 87

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG-------LFNDCF---- 223
           L   V A +   G    A VG+ ++  ++  G ++ +  VF+G       LFN       
Sbjct: 88  LGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYA 147

Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                E  +  +  M + GF  + FTF FVLK+ + L ++ + K  HG  L+   + DLY
Sbjct: 148 RYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLY 207

Query: 279 VAVALLDLYTKSGEISNARR-------------------------------IFEEMPKKD 307
           VA +L+ LY K GEI++A +                               IFE MP ++
Sbjct: 208 VATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRN 267

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRM--RQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
           ++ W+ MI+ Y+Q+ L+  A+ LF  M    + V PN  T +SVL ACA +  L+ G QI
Sbjct: 268 IVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQI 327

Query: 366 HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE--SPKRNHVTWNTMIVGYVQLG 423
           H L  R+GL S+  V  AL  +YAKCG + ++   F +    ++N + WNTMI  Y   G
Sbjct: 328 HELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYG 387

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN 483
              +A+  F +M++  +   ++T++ +L  C+    ++ G++ +   +   Y ++  V +
Sbjct: 388 HGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLK-YFNHMSTTYSINPRVEH 446

Query: 484 --ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
              + D+  + G + +A +LV +M        W ++++    H
Sbjct: 447 YACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKH 489



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 95/411 (23%), Positives = 161/411 (39%), Gaps = 74/411 (18%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           SYA   Q     + L+    +H  +L +G        + ++  Y     +  +  +F+ +
Sbjct: 72  SYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGI 131

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
            E +++ F + I+ Y         V  + ++H  G   + F F   LK  V +    +  
Sbjct: 132 GEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGK 191

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------ND 221
           CV   + ++G   + +V T+LI  +  CG +  A KVFD +                 + 
Sbjct: 192 CVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSG 251

Query: 222 CFEEALNFFSQM---------------------------------RAVGFKPNNFTFAFV 248
           C + AL  F +M                                    G +PN  T   V
Sbjct: 252 CIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSV 311

Query: 249 LKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPK--K 306
           L AC  L T+   +  H  A +     +  V +AL  +Y K G + +AR  F+++ +  K
Sbjct: 312 LPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEK 371

Query: 307 DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIH 366
           ++I W+ MI  YA     + AV  F  M QA + P+  TF  +L  C+           H
Sbjct: 372 NLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCS-----------H 420

Query: 367 SLVVRVGL-----LSDVFVSNALMDVYA-------KCGRMENSVELFAESP 405
           S +V VGL     +S  +  N  ++ YA       + GR+  + +L  E P
Sbjct: 421 SGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMP 471


>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
 gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
          Length = 1084

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 250/787 (31%), Positives = 394/787 (50%), Gaps = 38/787 (4%)

Query: 52   SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFAT---------NVLLNVYV 102
            +E +S +  + L +C +         +H   +K G   DL +          + L+ +YV
Sbjct: 295  TEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYV 354

Query: 103  KLNRLPDATKLFDEMPERNTISFVTTIQG-YTVSSQFVEAVGLFSTLHREGHELNPFAFT 161
            K   +  A ++FD MP +  +     I G Y  +++F E++ LF  +H  G   +  A +
Sbjct: 355  KCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALS 414

Query: 162  AFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL--- 218
              LK +  +  A         + KLG  +   V  ALI  ++    ++ A  VFD +   
Sbjct: 415  CLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQ 474

Query: 219  -------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAH 265
                          N    EA+  F +M   G + ++ T   VL AC       V +  H
Sbjct: 475  DTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVH 534

Query: 266  GCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSI 325
            G ++KT    +  +A ALLD+Y+   +  +  +IF  M +K+V+ W+ MI  Y +  L  
Sbjct: 535  GYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFD 594

Query: 326  DAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALM 385
                L   M    + P+ F   SVL   A  E L  G  +H   +R G+   + V+NALM
Sbjct: 595  KVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALM 654

Query: 386  DVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEV 445
            ++Y  C  ME +  +F     ++ ++WNT+I GY +     ++  +FS ML +  P T V
Sbjct: 655  EMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDMLLQFKPNT-V 713

Query: 446  TYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMM 505
            T + +L A AS+++LE G ++H   ++  +  D   +NAL+DMY KCG++  AR++FD +
Sbjct: 714  TMTCILPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRL 773

Query: 506  NDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE 565
               N +SW  MI+GY MHG   + + +F+ M+  G  P+  +F  +L AC + GL  +G 
Sbjct: 774  TKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGW 833

Query: 566  AYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACII 625
             +F +M   Y IEP ++HYT +V LL   G+L +A + IE +P +P   IW +LL  C I
Sbjct: 834  KFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLLHGCRI 893

Query: 626  HNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLS 674
            H +V++    A  +   EPE+   +VLL+NIYA A  WE           +   +  G S
Sbjct: 894  HRDVKLAEKVADRVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGCS 953

Query: 675  WIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYL 734
            WIE +G VH F A + +H + N I   L+ +  + R+ G+ P     L    +   +  L
Sbjct: 954  WIEVRGKVHVFIADNRNHPEWNRIAEFLDHVARRMREEGHDPKKKYSLMGANDAVHDEAL 1013

Query: 735  WVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHF 794
              HS KLA+ F +  +P   PIR+ KN ++C  CH A K ISK+  REII+RD  RFHHF
Sbjct: 1014 CGHSSKLAVTFGVLHLPEGRPIRVTKNSKVCSHCHEAAKFISKMCNREIILRDSSRFHHF 1073

Query: 795  QDGCCSC 801
            + G CSC
Sbjct: 1074 EGGRCSC 1080



 Score =  228 bits (582), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 152/538 (28%), Positives = 256/538 (47%), Gaps = 29/538 (5%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           ++H+ +  L+       +     IH  + K G        N L+ +Y +   + DA ++F
Sbjct: 197 DAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVF 256

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D M  R+ IS+ +TI GY  +     AV LFS +  EG E++     + L     +G+  
Sbjct: 257 DSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFEL 316

Query: 175 LCPCVFACVYKLG---------HDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDC--- 222
           +   V     K G            +  +G+ L+  +  CG +  AR+VFD + +     
Sbjct: 317 VGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVH 376

Query: 223 --------------FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCA 268
                         FEE+L  F QM  +G  P+    + +LK    L   R    AHG  
Sbjct: 377 VWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYL 436

Query: 269 LKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAV 328
           +K  +     V  AL+  Y KS  I NA  +F+ MP +D I W+ +I+      L+ +A+
Sbjct: 437 VKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAI 496

Query: 329 ELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVY 388
           ELF RM       +  T +SVL ACA      +G  +H   V+ GL+ +  ++NAL+D+Y
Sbjct: 497 ELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMY 556

Query: 389 AKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYS 448
           + C    ++ ++F    ++N V+W  MI  Y + G   K   +  +M+ + +       +
Sbjct: 557 SNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVT 616

Query: 449 SVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDW 508
           SVL   A   +L+ G  VH   ++   +  + VANAL++MY  C ++ +ARLVFD + + 
Sbjct: 617 SVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNK 676

Query: 509 NEVSWNAMISGYSMHGLSAEVLKVF-DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE 565
           + +SWN +I GYS +  + E   +F D++ Q  ++PN +T   +L A ++   LE+G 
Sbjct: 677 DIISWNTLIGGYSRNNFANESFSLFSDMLLQ--FKPNTVTMTCILPAVASISSLERGR 732



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 166/617 (26%), Positives = 280/617 (45%), Gaps = 32/617 (5%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQV-LKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
           SY   +Q C +   L+ A   H  V    G  +       L+  Y+K   L  A  +FDE
Sbjct: 96  SYCAVVQLCGEERSLEAARRAHALVRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFDE 155

Query: 117 MPER--NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           MP R  +   + + +  Y  +  F E V LF  +   G   +  A +  LK + S+G   
Sbjct: 156 MPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSIT 215

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GLF 219
               +   + KLG      V  ALI  +S CGC+E A +VFD               G F
Sbjct: 216 EGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYF 275

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            N   + A++ FS+M + G + ++ T   VL AC  L    V K  HG ++K+    DL 
Sbjct: 276 SNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLE 335

Query: 279 VAVALLD---------LYTKSGEISNARRIFEEMPKK-DVIPWSFMIARYAQTDLSIDAV 328
              + +D         +Y K G++ +ARR+F+ MP K +V  W+ ++  YA+     +++
Sbjct: 336 SVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESL 395

Query: 329 ELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVY 388
            LF +M +  + P++     +L+    +     G   H  +V++G  +   V NAL+  Y
Sbjct: 396 LLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFY 455

Query: 389 AKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYS 448
           AK   ++N+V +F   P ++ ++WN++I G    G   +A+ +F +M  +       T  
Sbjct: 456 AKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLL 515

Query: 449 SVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDW 508
           SVL ACA       G  VH  +VK     +  +ANAL+DMY+ C        +F  M   
Sbjct: 516 SVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQK 575

Query: 509 NEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYF 568
           N VSW AMI+ Y+  GL  +V  +   M   G +P+      VL   +    L+QG++  
Sbjct: 576 NVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVH 635

Query: 569 KSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
              + N G+E  +    +++ +     ++++A  + + +     ++ W  L+G    +N 
Sbjct: 636 GYAIRN-GMEKLLPVANALMEMYVNCRNMEEARLVFDHVT-NKDIISWNTLIGGYSRNNF 693

Query: 629 V-EIGRLSAQHILDFEP 644
             E   L +  +L F+P
Sbjct: 694 ANESFSLFSDMLLQFKP 710



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 127/456 (27%), Positives = 221/456 (48%), Gaps = 32/456 (7%)

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCA-LKTCYEMDLYVAVALL 284
           AL        VG +    ++  V++ C    ++  A+ AH      T   +   +   L+
Sbjct: 82  ALRLLGSDGGVGVR----SYCAVVQLCGEERSLEAARRAHALVRAGTGGIIGSVLGKRLV 137

Query: 285 DLYTKSGEISNARRIFEEMPKK--DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
             Y K G++  AR +F+EMP +  DV  W+ +++ YA+     + V LF +M+   V+P+
Sbjct: 138 LAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPD 197

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
                 VL+  A++  +  G  IH L+ ++GL     V+NAL+ +Y++CG ME+++++F 
Sbjct: 198 AHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFD 257

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
               R+ ++WN+ I GY   G   +A+ +FSKM  E    + VT  SVL ACA L     
Sbjct: 258 SMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELV 317

Query: 463 GMQVHCLTVKAN--YDMDVV-------VANALIDMYAKCGSITDARLVFDMMNDWNEVS- 512
           G  VH  ++K+   +D++ V       + + L+ MY KCG +  AR VFD M     V  
Sbjct: 318 GKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHV 377

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLS-----ACSNGGLLEQGEAY 567
           WN ++ GY+      E L +F+ M + G  P+      +L      +C+  GL+  G  Y
Sbjct: 378 WNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHG--Y 435

Query: 568 FKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
              +   +G +  +    +++S   ++  +D A  + + +P Q ++  W +++  C  + 
Sbjct: 436 LVKL--GFGTQCAV--CNALISFYAKSNMIDNAVLVFDRMPHQDTIS-WNSVISGCTSNG 490

Query: 628 -NVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARS 662
            N E   L  +  +     D  T  LLS + A ARS
Sbjct: 491 LNSEAIELFVRMWMQGHELDSTT--LLSVLPACARS 524


>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 646

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 209/530 (39%), Positives = 314/530 (59%), Gaps = 11/530 (2%)

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y K+G++  AR++F+EMP+++V  W+ M+A         +++  F  MR+  + P++F  
Sbjct: 117 YIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGL 176

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
            SV + CA +  +  G Q+H+ VVR GL  D+ V ++L  +Y +CG ++    +    P 
Sbjct: 177 GSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPS 236

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
            + V+ NT+I G  Q G+   A+  F  M    V A  VT+ S + +C+ LAAL  G Q+
Sbjct: 237 LSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQI 296

Query: 467 HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLS 526
           H   +KA  D  V V   L+ MY++CG + D+  VF      +    +AMIS Y  HG  
Sbjct: 297 HGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHG 356

Query: 527 AEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTS 586
            + +++F  M   G  P+++TF+ +L ACS+ GL E+G   F+ M   YG++P ++HYT 
Sbjct: 357 QKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTC 416

Query: 587 MVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPED 646
           +V LLGR+G LD+A  LI  +P  P  +IW+ LL AC    N ++    A+ +++ +P D
Sbjct: 417 VVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHD 476

Query: 647 EATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADM 695
            A++VLLSNI A +R W           +    KEPG+SW+E +G +H F  GD SH   
Sbjct: 477 SASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQ 536

Query: 696 NIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSP 755
             I   LE +  K R+ GY PD+S VL D+ ++EKE  L  HSEKLA+AFA   +P   P
Sbjct: 537 KEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVP 596

Query: 756 IRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           IR++KNLR+C DCH AIK++S++  REI++RDV RFHHF+DG CSC D+W
Sbjct: 597 IRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 646



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 103/432 (23%), Positives = 178/432 (41%), Gaps = 44/432 (10%)

Query: 3   RLFNYKTFSCKQLTHQSKINAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATS 62
           RLF++   +C+ L         LR L A AA S       T   +  + ++         
Sbjct: 45  RLFSHLFRACRALRP-------LRQLHAFAATSGAATDRFTANHLMLAYADLG------- 90

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
                   DL  A  +  ++ ++    ++ + N+L   Y+K   L  A KLFDEMPERN 
Sbjct: 91  --------DLTAARELFERIPRR----NVMSWNILFGGYIKNGDLGGARKLFDEMPERNV 138

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
            ++   + G T      E++G F  + REG   + F   +  +    +        V A 
Sbjct: 139 ATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAY 198

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEA 226
           V + G D +  VG++L   +  CGC++    V   L                 N   E A
Sbjct: 199 VVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGA 258

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           L +F  MR+VG   +  TF   + +C  L  +   +  HG  +K   +  + V   L+ +
Sbjct: 259 LEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHM 318

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y++ G + ++ R+F      D    S MI+ Y        A+ELF +M      P+  TF
Sbjct: 319 YSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTF 378

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRV-GLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           +++L AC+     + G     L+ +  G+   V     ++D+  + G ++ +  L    P
Sbjct: 379 LALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMP 438

Query: 406 -KRNHVTWNTMI 416
              + V W T++
Sbjct: 439 LTPDGVIWKTLL 450


>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 218/584 (37%), Positives = 340/584 (58%), Gaps = 19/584 (3%)

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           P   TF  ++ +C   +++      H C + + ++ D ++A  L+++Y + G I  A ++
Sbjct: 76  PTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALKV 135

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATME-- 357
           F+E  ++ +  W+ +    A      + ++L+ +M       ++FT+  VL+AC   E  
Sbjct: 136 FDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELS 195

Query: 358 --GLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTM 415
              L  G +IH+ ++R G  +++ V   L+DVYAK G +  +  +F   P +N V+W+ M
Sbjct: 196 VCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAM 255

Query: 416 IVGYVQLGEVGKAMIMFSKMLEE---QVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
           I  + +     KA+ +F  M+ E    VP + VT  ++L+ACA LAALE G  +H   ++
Sbjct: 256 IACFAKNEMPMKALELFQLMMFEACNSVPNS-VTMVNMLQACAGLAALEQGKLIHGYILR 314

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
              D  + V NALI MY +CG +   + VFD M   + VSWN++IS Y MHG   + +++
Sbjct: 315 RQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQI 374

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
           F+ M  +G  P+ ++F+ VL ACS+ GL+E+G+  F+SM++ Y I P +EHY  MV LLG
Sbjct: 375 FENMIHQGVSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLG 434

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVL 652
           RA  L +A KLIE + F+P   +W +LLG+C IH NVE+   ++  + + EP +   +VL
Sbjct: 435 RANRLGEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTVLFELEPRNAGNYVL 494

Query: 653 LSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGM 701
           L++IYA A+ W +A S           K PG SWIE +  V+ F + D  +  +  I  +
Sbjct: 495 LADIYAEAKLWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHAL 554

Query: 702 LEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKN 761
           L  L+ + +  GY+P  + VL D+ E+EKER +  HSEKLA+AF L        IRI KN
Sbjct: 555 LVKLSNEMKAQGYVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTAKGETIRIRKN 614

Query: 762 LRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           LR+C DCH   K ISK   REI++RDV+RFHHF+DG CSCGD+W
Sbjct: 615 LRLCEDCHAVTKFISKFANREILVRDVNRFHHFRDGVCSCGDYW 658



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 169/365 (46%), Gaps = 25/365 (6%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           + SC Q + L   + +H  ++  G   D F    L+N+Y +L  +  A K+FDE  ER  
Sbjct: 85  IYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALKVFDETRERTI 144

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC---- 178
             +    +   +     E + L+  ++  G   + F +T  LK  V +    +CP     
Sbjct: 145 YVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACV-VSELSVCPLRKGK 203

Query: 179 -VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND----------CFE--- 224
            + A + + G+++N  V T L+D ++  G V +A  VF  +             CF    
Sbjct: 204 EIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNE 263

Query: 225 ---EALNFFSQM--RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
              +AL  F  M   A    PN+ T   +L+AC GL  +   K  HG  L+   +  L V
Sbjct: 264 MPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPV 323

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
             AL+ +Y + GE+   +R+F+ M K+DV+ W+ +I+ Y        A+++F  M    V
Sbjct: 324 LNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGV 383

Query: 340 APNQFTFVSVLQACATMEGLDLGNQI-HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           +P+  +F++VL AC+    ++ G  +  S++ +  +   +     ++D+  +  R+  ++
Sbjct: 384 SPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLGEAI 443

Query: 399 ELFAE 403
           +L  +
Sbjct: 444 KLIED 448


>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
 gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
          Length = 708

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 225/610 (36%), Positives = 341/610 (55%), Gaps = 21/610 (3%)

Query: 211 ARKVFDGLFNDCFEEALNFFSQMRAV----GFKPNNFTFAFVLKACLGLDTIRVAKSAHG 266
           A ++F  LF  C   AL    Q+ A     G   + FT   ++ A   L  +  A+    
Sbjct: 105 AARLFSHLFRAC--RALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAAREL-- 160

Query: 267 CALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSID 326
              +     ++     L   Y K+G++  AR++F+EMP+++V  W+ M+A         +
Sbjct: 161 --FERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEE 218

Query: 327 AVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMD 386
           ++  F  MR+  + P++F   SV + CA +  +  G Q+H+ VVR GL  D+ V ++L  
Sbjct: 219 SLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAH 278

Query: 387 VYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVT 446
           +Y +CG ++    +    P  + V+ NT+I G  Q G+   A+  F  M    V A  VT
Sbjct: 279 MYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVT 338

Query: 447 YSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN 506
           + S + +C+ LAAL  G Q+H   +KA  D  V V   L+ MY++CG + D+  VF    
Sbjct: 339 FVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYC 398

Query: 507 DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEA 566
             +    +AMIS Y  HG   + +++F  M   G  P+++TF+ +L ACS+ GL E+G  
Sbjct: 399 GSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMD 458

Query: 567 YFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH 626
            F+ M   YG++P ++HYT +V LLGR+G LD+A  LI  +P  P  +IW+ LL AC   
Sbjct: 459 CFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQ 518

Query: 627 NNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSW 675
            N ++    A+ +++ +P D A++VLLSNI A +R W           +    KEPG+SW
Sbjct: 519 KNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSW 578

Query: 676 IENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLW 735
           +E +G +H F  GD SH     I   LE +  K R+ GY PD+S VL D+ ++EKE  L 
Sbjct: 579 VELKGHIHQFCTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLS 638

Query: 736 VHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQ 795
            HSEKLA+AFA   +P   PIR++KNLR+C DCH AIK++S++  REI++RDV RFHHF+
Sbjct: 639 HHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFK 698

Query: 796 DGCCSCGDFW 805
           DG CSC D+W
Sbjct: 699 DGRCSCRDYW 708



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 103/432 (23%), Positives = 178/432 (41%), Gaps = 44/432 (10%)

Query: 3   RLFNYKTFSCKQLTHQSKINAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATS 62
           RLF++   +C+ L         LR L A AA S       T   +  + ++         
Sbjct: 107 RLFSHLFRACRALRP-------LRQLHAFAATSGAATDRFTANHLMLAYADLG------- 152

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
                   DL  A  +  ++ ++    ++ + N+L   Y+K   L  A KLFDEMPERN 
Sbjct: 153 --------DLTAARELFERIPRR----NVMSWNILFGGYIKNGDLGGARKLFDEMPERNV 200

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
            ++   + G T      E++G F  + REG   + F   +  +    +        V A 
Sbjct: 201 ATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAY 260

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEA 226
           V + G D +  VG++L   +  CGC++    V   L                 N   E A
Sbjct: 261 VVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGA 320

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           L +F  MR+VG   +  TF   + +C  L  +   +  HG  +K   +  + V   L+ +
Sbjct: 321 LEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHM 380

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y++ G + ++ R+F      D    S MI+ Y        A+ELF +M      P+  TF
Sbjct: 381 YSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTF 440

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRV-GLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           +++L AC+     + G     L+ +  G+   V     ++D+  + G ++ +  L    P
Sbjct: 441 LALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMP 500

Query: 406 -KRNHVTWNTMI 416
              + V W T++
Sbjct: 501 LTPDGVIWKTLL 512


>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
 gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 595

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 205/527 (38%), Positives = 318/527 (60%), Gaps = 14/527 (2%)

Query: 293 ISNARRIFEEMPKK-DVIPWSFMIARYAQTDLSIDAVELFCRMR-QAFVAPNQFTFVSVL 350
           +S A ++F ++ K  +V  W+ +I  YA+   SI A  L+  MR    V P+  T+  ++
Sbjct: 69  MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128

Query: 351 QACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHV 410
           +A  TM  + LG  IHS+V+R G  S ++V N+L+ +YA CG + ++ ++F + P+++ V
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188

Query: 411 TWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLT 470
            WN++I G+ + G+  +A+ ++++M  + +     T  S+L ACA + AL  G +VH   
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM 248

Query: 471 VKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVL 530
           +K     ++  +N L+D+YA+CG + +A+ +FD M D N VSW ++I G +++G   E +
Sbjct: 249 IKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAI 308

Query: 531 KVFDLMQQ-RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVS 589
           ++F  M+   G  P  +TFVG+L ACS+ G++++G  YF+ M   Y IEP IEH+  MV 
Sbjct: 309 ELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVD 368

Query: 590 LLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEAT 649
           LL RAG + KA + I+ +P QP+V+IWR LLGAC +H + ++   +   IL  EP     
Sbjct: 369 LLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGD 428

Query: 650 HVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNII 698
           +VLLSN+YA  + W                K PG S +E    VH F  GD SH   + I
Sbjct: 429 YVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAI 488

Query: 699 RGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRI 758
              L+ +  + R  GY+P +S V  DV E+EKE  +  HSEK+A+AF L   P  SPI +
Sbjct: 489 YAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITV 548

Query: 759 IKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +KNLR+C DCH AIK++SK+  REI++RD  RFHHF++G CSC D+W
Sbjct: 549 VKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 180/326 (55%), Gaps = 10/326 (3%)

Query: 226 ALNFFSQMRAVGF-KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           A + + +MR  G  +P+  T+ F++KA   +  +R+ ++ H   +++ +   +YV  +LL
Sbjct: 104 AFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLL 163

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
            LY   G++++A ++F++MP+KD++ W+ +I  +A+     +A+ L+  M    + P+ F
Sbjct: 164 HLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGF 223

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           T VS+L ACA +  L LG ++H  +++VGL  ++  SN L+D+YA+CGR+E +  LF E 
Sbjct: 224 TIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM 283

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE--EQVPATEVTYSSVLRACASLAALEP 462
             +N V+W ++IVG    G  GK  I   K +E  E +   E+T+  +L AC+    ++ 
Sbjct: 284 VDKNSVSWTSLIVGLAVNG-FGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKE 342

Query: 463 GMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISG 519
           G + +   ++  Y ++  + +   ++D+ A+ G +  A   +  M    N V W  ++  
Sbjct: 343 GFE-YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGA 401

Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNN 545
            ++HG S   L  F  +Q     PN+
Sbjct: 402 CTVHGDSD--LAEFARIQILQLEPNH 425



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 150/331 (45%), Gaps = 27/331 (8%)

Query: 110 ATKLFDEMPER-NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGH-ELNPFAFTAFLKVL 167
           A K+F ++ +  N   + T I+GY      + A  L+  +   G  E +   +   +K +
Sbjct: 72  AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131

Query: 168 VSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF-------- 219
            +M    L   + + V + G  S  +V  +L+  ++ CG V  A KVFD +         
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191

Query: 220 --------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT 271
                   N   EEAL  +++M + G KP+ FT   +L AC  +  + + K  H   +K 
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251

Query: 272 CYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELF 331
               +L+ +  LLDLY + G +  A+ +F+EM  K+ + W+ +I   A      +A+ELF
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 311

Query: 332 CRMRQA-FVAPNQFTFVSVLQACA----TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMD 386
             M     + P + TFV +L AC+      EG +   ++        +   +     ++D
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMRE---EYKIEPRIEHFGCMVD 368

Query: 387 VYAKCGRMENSVELFAESP-KRNHVTWNTMI 416
           + A+ G+++ + E     P + N V W T++
Sbjct: 369 LLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 399



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/314 (22%), Positives = 147/314 (46%), Gaps = 29/314 (9%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E ++H+Y   +++     D++   TIH  V++ G    ++  N LL++Y     +  A K
Sbjct: 118 EPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYK 177

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +FD+MPE++ +++ + I G+  + +  EA+ L++ ++ +G + + F   + L     +G 
Sbjct: 178 VFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGA 237

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------G 217
             L   V   + K+G   N      L+D ++ CG VE A+ +FD               G
Sbjct: 238 LTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVG 297

Query: 218 LFNDCF-EEALNFFSQMRAV-GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
           L  + F +EA+  F  M +  G  P   TF  +L AC     ++     +   ++  Y++
Sbjct: 298 LAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEG-FEYFRRMREEYKI 356

Query: 276 DLYVA--VALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIAR---YAQTDLSIDAVE 329
           +  +     ++DL  ++G++  A    + MP + +V+ W  ++     +  +DL+     
Sbjct: 357 EPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA----- 411

Query: 330 LFCRMRQAFVAPNQ 343
            F R++   + PN 
Sbjct: 412 EFARIQILQLEPNH 425


>gi|356525712|ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Glycine max]
          Length = 691

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 223/594 (37%), Positives = 347/594 (58%), Gaps = 14/594 (2%)

Query: 225 EALNFFS--QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
           EA+  F   ++   G+     T+  ++ AC+GL +IR  K      + + +E DLYV   
Sbjct: 99  EAMELFEILELEHDGYGVGASTYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLYVMNR 158

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           +L ++ K G + +AR++F+EMP+KDV  W  M+     T    +A  LF  M + F    
Sbjct: 159 VLFMHVKCGLMLDARKLFDEMPEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGR 218

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
             TF ++++A A +  + +G QIHS  ++ G+  D FVS AL+D+Y+KCG +E++  +F 
Sbjct: 219 SRTFATMIRASAGLGLVQVGKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFD 278

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
           + P++  V WN++I  Y   G   +A+ ++ +M +        T S V+R CA LA+LE 
Sbjct: 279 QMPEKTTVGWNSIIASYALHGYSEEALSLYFEMRDSGTTVDHFTISIVIRICARLASLEH 338

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
             Q H   V+  +  D+V   AL+D Y+K G + DAR VF+ M   N +SWNA+I+GY  
Sbjct: 339 AKQAHAALVRHGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYGN 398

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
           HG   E +++F+ M Q G  P ++TF+ VLSACS  GL ++G   F SM  ++ ++P   
Sbjct: 399 HGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSACSYSGLSQRGWEIFYSMKRDHKVKPRAM 458

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDF 642
           HY  M+ LLGR   LD+A  LI   PF+P+  +W ALL AC +H N+E+G+L+A+ +   
Sbjct: 459 HYACMIELLGRESLLDEAYALIRTAPFKPTANMWAALLTACRMHKNLELGKLAAEKLYGM 518

Query: 643 EPEDEATHVLLSNIYAMARSWEKAAS-----KEPGL------SWIENQGMVHYFRAGDTS 691
           EPE    +++L N+Y  +   ++AA      K+ GL      SW+E +   + F  GD S
Sbjct: 519 EPEKLCNYIVLLNLYNSSGKLKEAAGILQTLKKKGLRMLPACSWVEVKKQPYAFLCGDKS 578

Query: 692 HADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMP 751
           H+    I   ++ L ++  K GY  +   +L DV E+E +R L  HSEKLA+AF L   P
Sbjct: 579 HSQTKEIYQKVDNLMVEICKHGYAEENETLLPDVDEEE-QRILKYHSEKLAIAFGLINTP 637

Query: 752 PSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
             +P++I +  R+C DCH+AIK+I+ +  REI++RD  RFHHF++G CSCGD+W
Sbjct: 638 HWTPLQITQGHRVCGDCHSAIKLIAMVTGREIVVRDASRFHHFRNGSCSCGDYW 691



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 95/313 (30%), Positives = 159/313 (50%), Gaps = 16/313 (5%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +Y   + +C+    ++    +   ++  G   DL+  N +L ++VK   + DA KLFDEM
Sbjct: 120 TYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLYVMNRVLFMHVKCGLMLDARKLFDEM 179

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
           PE++  S++T + G   +  F EA  LF  + +E ++     F   ++    +G  ++  
Sbjct: 180 PEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSRTFATMIRASAGLGLVQVGK 239

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FND 221
            + +C  K G   + FV  ALID +S CG +E A  VFD +                 + 
Sbjct: 240 QIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHG 299

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
             EEAL+ + +MR  G   ++FT + V++ C  L ++  AK AH   ++  +  D+    
Sbjct: 300 YSEEALSLYFEMRDSGTTVDHFTISIVIRICARLASLEHAKQAHAALVRHGFATDIVANT 359

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           AL+D Y+K G + +AR +F  M  K+VI W+ +IA Y       +AVE+F +M Q  V P
Sbjct: 360 ALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYGNHGQGQEAVEMFEQMLQEGVTP 419

Query: 342 NQFTFVSVLQACA 354
              TF++VL AC+
Sbjct: 420 THVTFLAVLSACS 432



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 19/219 (8%)

Query: 53  EFN---SHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD 109
           EFN   S ++AT +++      +Q    IH   LK+G   D F +  L+++Y K   + D
Sbjct: 213 EFNDGRSRTFATMIRASAGLGLVQVGKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIED 272

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A  +FD+MPE+ T+ + + I  Y +     EA+ L+  +   G  ++ F  +  +++   
Sbjct: 273 AHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYFEMRDSGTTVDHFTISIVIRICAR 332

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF------ 223
           +   E      A + + G  ++    TAL+D +S  G +E AR VF+ + +         
Sbjct: 333 LASLEHAKQAHAALVRHGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNVISWNAL 392

Query: 224 ----------EEALNFFSQMRAVGFKPNNFTFAFVLKAC 252
                     +EA+  F QM   G  P + TF  VL AC
Sbjct: 393 IAGYGNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSAC 431



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 121/287 (42%), Gaps = 32/287 (11%)

Query: 25  LRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLK 84
           L G S +A     +  +S TT   F++S          ++ C +   L+ A   H  +++
Sbjct: 297 LHGYSEEALSLYFEMRDSGTTVDHFTIS--------IVIRICARLASLEHAKQAHAALVR 348

Query: 85  KGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGL 144
            G   D+ A   L++ Y K  R+ DA  +F+ M  +N IS+   I GY    Q  EAV +
Sbjct: 349 HGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYGNHGQGQEAVEM 408

Query: 145 FSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSV 204
           F  + +EG  + P   T FL VL +  ++ L    +   Y +  D           A   
Sbjct: 409 FEQMLQEG--VTPTHVT-FLAVLSACSYSGLSQRGWEIFYSMKRDHK-----VKPRAMHY 460

Query: 205 CGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSA 264
              +E   +          +EA   ++ +R   FKP    +A +L AC     + + K  
Sbjct: 461 ACMIELLGR------ESLLDEA---YALIRTAPFKPTANMWAALLTACRMHKNLELGK-- 509

Query: 265 HGCALKTCYEMD---LYVAVALLDLYTKSGEISNARRIFEEMPKKDV 308
              A +  Y M+   L   + LL+LY  SG++  A  I + + KK +
Sbjct: 510 --LAAEKLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGILQTLKKKGL 554


>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 225/703 (32%), Positives = 386/703 (54%), Gaps = 30/703 (4%)

Query: 57  HSYAT---SLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
           H YAT    L++C   +D    + +HC  ++ G   D+   + L+++Y K  +L DA ++
Sbjct: 136 HDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFRV 195

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           F EMPERN + +   I GY  + +F+E + LF  + + G  ++   + +  +    +   
Sbjct: 196 FREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAF 255

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN------------- 220
           +L   +     K     ++ +GTA +D ++ C  +  A KVF+ L N             
Sbjct: 256 KLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGY 315

Query: 221 ---DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
              D   +AL+ F  ++      +  + +  L AC  +         HG A+K     ++
Sbjct: 316 ARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNI 375

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
            VA  +LD+Y K G +  A  IFEEM ++D + W+ +IA + Q +  +  + LF  M ++
Sbjct: 376 CVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRS 435

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            + P+ FT+ SV++ACA  + L+ G +IH  +++ G+  D FV +AL+D+Y KCG +  +
Sbjct: 436 TMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEA 495

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
            ++ A   ++  V+WN++I G+    +   A   FS+MLE  +     TY++VL  CA++
Sbjct: 496 EKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANM 555

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
           A +E G Q+H   +K     DV +A+ L+DMY+KCG++ D+RL+F+     + V+W+AMI
Sbjct: 556 ATIELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMI 615

Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
             Y+ HGL  + + +F+ MQ    +PN+  F+ VL AC++ G +++G  YF+ M+++YG+
Sbjct: 616 CAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGL 675

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQ 637
           +P +EHY+ MV LLGR+G +++A KLIE +PF+   +IWR LL  C +  NVE+   +  
Sbjct: 676 DPQMEHYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSNCKMQGNVEVAEKAFN 735

Query: 638 HILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFR 686
            +L  +P+D + +VLL+N+YA+   W + A            KEPG SWIE +  VH F 
Sbjct: 736 SLLQLDPQDSSAYVLLANVYAIVGMWGEVAKMRSIMKNCKLKKEPGCSWIEVRDEVHTFL 795

Query: 687 AGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDE 729
            GD +H     I      L  + + AGY+PD+  +L +  E++
Sbjct: 796 VGDKAHPRSEEIYEQTHLLVDEMKWAGYVPDIDFMLDEEMEEQ 838



 Score =  249 bits (635), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 162/636 (25%), Positives = 294/636 (46%), Gaps = 51/636 (8%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVK----------LNRL 107
           +++  LQ C     L     +H Q++  G    ++  N LL  Y K           +R+
Sbjct: 8   TFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRM 67

Query: 108 PD---------------------ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFS 146
           P                      A  LFD MPER+ +S+ + +  Y  +    +++ +F 
Sbjct: 68  PQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127

Query: 147 TLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCG 206
            +       +   F   LK    +    L   V     ++G +++   G+AL+D +S C 
Sbjct: 128 RMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCK 187

Query: 207 CVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLK 250
            ++ A +VF  +                 ND F E L  F  M  VG   +  T+A V +
Sbjct: 188 KLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFR 247

Query: 251 ACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIP 310
           +C GL   ++    HG ALK+ +  D  +  A LD+Y K   + +A ++F  +P      
Sbjct: 248 SCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQS 307

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV 370
           ++ +I  YA+ D  + A+++F  +++  +  ++ +    L AC+ ++    G Q+H L V
Sbjct: 308 YNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAV 367

Query: 371 RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMI 430
           + GL  ++ V+N ++D+Y KCG +  +  +F E  +R+ V+WN +I  + Q  E+ K + 
Sbjct: 368 KCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLS 427

Query: 431 MFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYA 490
           +F  ML   +   + TY SV++ACA   AL  G ++H   +K+   +D  V +AL+DMY 
Sbjct: 428 LFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYG 487

Query: 491 KCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVG 550
           KCG + +A  +   + +   VSWN++ISG+S    S    + F  M + G  P+N T+  
Sbjct: 488 KCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYAT 547

Query: 551 VLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQ 610
           VL  C+N   +E G+    + +    +   +   +++V +  + G++  +  + E  P +
Sbjct: 548 VLDVCANMATIELGKQ-IHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKR 606

Query: 611 PSVMIWRALLGACIIHNNVE--IGRLSAQHILDFEP 644
             V  W A++ A   H   E  I       +L+ +P
Sbjct: 607 DYV-TWSAMICAYAYHGLGEKAINLFEEMQLLNVKP 641



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 151/302 (50%), Gaps = 34/302 (11%)

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
            + TF  +LQ C+ ++ L+ G Q+H+ ++  G +  ++V+N L+  Y K  +M  + ++F
Sbjct: 5   KKLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVF 64

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE----------------------- 438
              P+R+ ++WNT+I GY  +G +G A  +F  M E                        
Sbjct: 65  DRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIE 124

Query: 439 --------QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYA 490
                   ++P    T++ +L+AC+ +     G+QVHCL ++  ++ DVV  +AL+DMY+
Sbjct: 125 IFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYS 184

Query: 491 KCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVG 550
           KC  + DA  VF  M + N V W+A+I+GY  +    E LK+F  M + G   +  T+  
Sbjct: 185 KCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYAS 244

Query: 551 VLSACSNGGLLEQG-EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF 609
           V  +C+     + G + +  ++ +++  +  I   T+ + +  +   +  A K+   +P 
Sbjct: 245 VFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIG--TATLDMYAKCERMFDAWKVFNTLPN 302

Query: 610 QP 611
            P
Sbjct: 303 PP 304



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 139/291 (47%), Gaps = 30/291 (10%)

Query: 50  SVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD 109
           S  E +  +Y + +++C     L     IH +++K G  LD F  + L+++Y K   L +
Sbjct: 435 STMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLME 494

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A K+   + E+ T+S+ + I G++   Q   A   FS +   G   + + +   L V  +
Sbjct: 495 AEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCAN 554

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG------------ 217
           M   EL   + A + KL   S+ ++ + L+D +S CG ++ +R +F+             
Sbjct: 555 MATIELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAM 614

Query: 218 ----LFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL-------GLDTIRVAKSAHG 266
                ++   E+A+N F +M+ +  KPN+  F  VL+AC        GL   +   S +G
Sbjct: 615 ICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYG 674

Query: 267 CALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
                  +M+ Y    ++DL  +SG+++ A ++ E MP + D + W  +++
Sbjct: 675 LDP----QMEHY--SCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLS 719



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 35/216 (16%)

Query: 441 PATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARL 500
           P  ++T+S +L+ C++L AL PG QVH   +   +   + VAN L+  Y K   +  A  
Sbjct: 3   PTKKLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFK 62

Query: 501 VFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR---GWR--------------- 542
           VFD M   + +SWN +I GY+  G       +FD M +R    W                
Sbjct: 63  VFDRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKS 122

Query: 543 ------------PNNL-TFVGVLSACSNGGLLEQGEAY-FKSMVANYGIEPCIEHYTSMV 588
                       P++  TF  +L ACS  G+ + G       +    G E  +   +++V
Sbjct: 123 IEIFVRMRSLKIPHDYATFAVILKACS--GIEDYGLGLQVHCLAIQMGFENDVVTGSALV 180

Query: 589 SLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACI 624
            +  +   LD A ++   +P + +++ W A++   +
Sbjct: 181 DMYSKCKKLDDAFRVFREMP-ERNLVCWSAVIAGYV 215


>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 595

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 207/527 (39%), Positives = 321/527 (60%), Gaps = 14/527 (2%)

Query: 293 ISNARRIFEEMPKK-DVIPWSFMIARYAQTDLSIDAVELFCRMR-QAFVAPNQFTFVSVL 350
           +S A ++F ++ K  +V  W+ +I  YA+   S+ AV L+  MR   FV P+  T+  +L
Sbjct: 69  MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLL 128

Query: 351 QACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHV 410
           +A   M  + LG  IHS+V+R G  S ++V N+L+ +YA CG + ++ ++F + P+++ V
Sbjct: 129 KAVGKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188

Query: 411 TWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLT 470
            WN++I G+ + G+  +A+ ++++M  + +     T  S+L ACA + AL  G + H   
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYM 248

Query: 471 VKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVL 530
           +K     ++  +N L+D+YA+CG + +A+ +FD M D N VSW ++I G +++GL  E +
Sbjct: 249 IKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAI 308

Query: 531 KVFDLMQQR-GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVS 589
           ++F  M+ + G  P  +TFVG+L ACS+ G++++G  YF+ M   Y IEP IEH+  MV 
Sbjct: 309 ELFKNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVD 368

Query: 590 LLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEAT 649
           LL RAG + KA + I  +P QP+V+IWR LLGAC +H + ++  L+   IL  EP     
Sbjct: 369 LLARAGQVKKAYEYILKMPMQPNVVIWRTLLGACTVHGDSDLAELARMKILQLEPNHSGD 428

Query: 650 HVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNII 698
           +VLLSN+YA  + W                K PG S +E    VH F  GD SH   ++I
Sbjct: 429 YVLLSNMYASEQRWSDVQKIRKQMLRDGVRKVPGHSLVEVGNRVHEFLMGDKSHPQNDMI 488

Query: 699 RGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRI 758
              L+ +  + R  GY+P +S V  DV E+EKE  L  HSEK+A+AF L   P   PIR+
Sbjct: 489 YAKLKEMTDRLRLEGYVPQISNVYVDVEEEEKENALVYHSEKIAIAFMLISTPERWPIRV 548

Query: 759 IKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +KNL++C DCH AIK++SK+  REI++RD  RFHHF++G CSC D+W
Sbjct: 549 VKNLKVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 175/306 (57%), Gaps = 6/306 (1%)

Query: 226 ALNFFSQMRAVGF-KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           A++ + +MRA GF +P+  T+ F+LKA   +  +R+ ++ H   +++ +   +YV  +LL
Sbjct: 104 AVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETIHSVVIRSGFGSLIYVQNSLL 163

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
            LY   G++++A ++F++MP+KD++ W+ +I  +A+     +A+ L+  M    + P+ F
Sbjct: 164 HLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMDLKGIKPDGF 223

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           T VS+L ACA +  L LG + H  +++VGL  ++  SN L+D+YA+CGR+E +  LF E 
Sbjct: 224 TIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM 283

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKM-LEEQVPATEVTYSSVLRACASLAALEPG 463
             +N V+W ++IVG    G   +A+ +F  M  +E +   E+T+  +L AC+    ++ G
Sbjct: 284 VDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFVGILYACSHCGMVKEG 343

Query: 464 MQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGY 520
            + +   +   Y ++  + +   ++D+ A+ G +  A   +  M    N V W  ++   
Sbjct: 344 FE-YFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQPNVVIWRTLLGAC 402

Query: 521 SMHGLS 526
           ++HG S
Sbjct: 403 TVHGDS 408



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 155/331 (46%), Gaps = 27/331 (8%)

Query: 110 ATKLFDEMPER-NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGH-ELNPFAFTAFLKVL 167
           A K+F ++ +  N   + T I+GY      V AV L+  +   G  E +   +   LK +
Sbjct: 72  AHKVFSKIEKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAV 131

Query: 168 VSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF-------- 219
             M    L   + + V + G  S  +V  +L+  ++ CG V  A KVFD +         
Sbjct: 132 GKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191

Query: 220 --------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT 271
                   N   EEAL  +++M   G KP+ FT   +L AC  +  + + K  H   +K 
Sbjct: 192 SVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKV 251

Query: 272 CYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELF 331
               +L+ +  LLDLY + G +  A+ +F+EM  K+ + W+ +I   A   L  +A+ELF
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELF 311

Query: 332 CRMR-QAFVAPNQFTFVSVLQACA----TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMD 386
             M  +  + P + TFV +L AC+      EG +   ++ S   ++    + F    ++D
Sbjct: 312 KNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRM-SEEYKIEPRIEHF--GCMVD 368

Query: 387 VYAKCGRMENSVELFAESP-KRNHVTWNTMI 416
           + A+ G+++ + E   + P + N V W T++
Sbjct: 369 LLARAGQVKKAYEYILKMPMQPNVVIWRTLL 399



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 72/314 (22%), Positives = 144/314 (45%), Gaps = 29/314 (9%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E ++H+Y   L++  +  D++   TIH  V++ G    ++  N LL++Y     +  A K
Sbjct: 118 EPDTHTYPFLLKAVGKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYK 177

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +FD+MPE++ +++ + I G+  + +  EA+ L++ +  +G + + F   + L     +G 
Sbjct: 178 VFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGA 237

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------------- 218
             L       + K+G   N      L+D ++ CG VE A+ +FD +              
Sbjct: 238 LTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVG 297

Query: 219 --FNDCFEEALNFFSQMRAV-GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
              N   +EA+  F  M +  G  P   TF  +L AC     ++     +   +   Y++
Sbjct: 298 LAVNGLGKEAIELFKNMESKEGLLPCEITFVGILYACSHCGMVKEG-FEYFRRMSEEYKI 356

Query: 276 DLYVA--VALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIAR---YAQTDLSIDAVE 329
           +  +     ++DL  ++G++  A     +MP + +V+ W  ++     +  +DL+    E
Sbjct: 357 EPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQPNVVIWRTLLGACTVHGDSDLA----E 412

Query: 330 LFCRMRQAFVAPNQ 343
           L  RM+   + PN 
Sbjct: 413 L-ARMKILQLEPNH 425


>gi|357509743|ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124360204|gb|ABN08217.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355500175|gb|AES81378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 596

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 214/537 (39%), Positives = 320/537 (59%), Gaps = 15/537 (2%)

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L++ Y+K+    ++ +IF + P K    WS +I+ +AQ DL + ++  F  M +  V P+
Sbjct: 61  LINFYSKTHLPYSSLQIFHDSPHKSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPD 120

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
              F S  ++C  +  L +   +H   ++     D+FV ++++D+YAKCG +  +  +F 
Sbjct: 121 DHIFPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFD 180

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML--EEQVPATEVTYSSVLRACASLAAL 460
           E P RN V+W+ +I GYVQLGE  +++ +F + L  EE     + T SSVLR C     L
Sbjct: 181 EMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLL 240

Query: 461 EPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY 520
           + G  +H L+ K ++D    VA++LI +Y+KCG + +A  VF+ +   N   WNAM+   
Sbjct: 241 QMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIAC 300

Query: 521 SMHGLSAEVLKVFDLMQQ-RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
           + H  + +  ++FD M+   G + N +TF+ VL ACS+ GL+E+G+ YF+ ++ +YGIEP
Sbjct: 301 AQHAHTDKTFELFDKMKSVGGMKANFITFLCVLYACSHAGLVEKGKYYFE-LMKDYGIEP 359

Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHI 639
             +HY++MV LLGRAG L+ A KLIE +P +P+  +W ALL  C +H N ++    A  +
Sbjct: 360 GTQHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTESVWGALLTGCRLHGNTKLASYVADRV 419

Query: 640 LDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAG 688
            +        HV+LSN YA A  WE+AA            KE GLSW+E    +H F AG
Sbjct: 420 SELGSVSSGLHVMLSNAYAAAGRWEEAAKARKMMRDRGIKKETGLSWVEEGNRIHTFAAG 479

Query: 689 DTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALF 748
           D SHA    I   L+ L  +  KAGY+ D S VL++V  +EK R +  HSE+LA+AF   
Sbjct: 480 DRSHAKSVEIYDKLDELGEEMDKAGYVADTSFVLKEVDGEEKSRSIRYHSERLAIAFGFI 539

Query: 749 KMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
             P   PIR++KNLR+C DCHTAIK ISK   R II+RD +RFH F+DG C+CGD+W
Sbjct: 540 TFPHGQPIRVMKNLRVCGDCHTAIKFISKCTGRVIIVRDNNRFHRFEDGKCTCGDYW 596



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 182/363 (50%), Gaps = 6/363 (1%)

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           ND    +LN+F  M   G  P++  F    K+C  L ++ VAK  H  ALKT Y +D++V
Sbjct: 99  NDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFV 158

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR--MRQA 337
             +++D+Y K G+I  A  +F+EMP ++V+ WS +I  Y Q     +++ LF R  + + 
Sbjct: 159 GSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEE 218

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
               N FT  SVL+ C     L +G  IH L  +    S  FV+++L+ +Y+KCG +E +
Sbjct: 219 NEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEA 278

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE-EQVPATEVTYSSVLRACAS 456
            ++F E   RN   WN M++   Q     K   +F KM     + A  +T+  VL AC+ 
Sbjct: 279 YDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLCVLYACSH 338

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNA 515
              +E G     L      +      + ++D+  + G + DA +L+ +M  +  E  W A
Sbjct: 339 AGLVEKGKYYFELMKDYGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTESVWGA 398

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           +++G  +HG +     V D + + G   + L  V + +A +  G  E+  A  + M+ + 
Sbjct: 399 LLTGCRLHGNTKLASYVADRVSELGSVSSGL-HVMLSNAYAAAGRWEEA-AKARKMMRDR 456

Query: 576 GIE 578
           GI+
Sbjct: 457 GIK 459



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 144/274 (52%), Gaps = 4/274 (1%)

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           L  G Q+H+ ++++GL +   +S+ L++ Y+K     +S+++F +SP ++  TW+++I  
Sbjct: 36  LPKGLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKSATTWSSVISS 95

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           + Q      ++  F  ML + VP  +  + S  ++C  L++L     +HC  +K  Y +D
Sbjct: 96  FAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTAYHLD 155

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD--LM 536
           + V +++IDMYAKCG I  A  VFD M   N VSW+ +I GY   G   E L++F   L+
Sbjct: 156 IFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLV 215

Query: 537 QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGH 596
           ++     N+ T   VL  C    LL+ G               C    +S++SL  + G 
Sbjct: 216 EEENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFV-ASSLISLYSKCGV 274

Query: 597 LDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
           +++A  + E +  + ++ +W A+L AC  H + +
Sbjct: 275 VEEAYDVFEEVTVR-NLGMWNAMLIACAQHAHTD 307



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 124/269 (46%), Gaps = 19/269 (7%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           + H + ++ +SC     L  A  +HC  LK    LD+F  + ++++Y K   +  A  +F
Sbjct: 120 DDHIFPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVF 179

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFST--LHREGHELNPFAFTAFLKVLVSMGW 172
           DEMP RN +S+   I GY    +  E++ LF    +  E   +N F  ++ L+V      
Sbjct: 180 DEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTL 239

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-------GLFNDCF-- 223
            ++   +    +K   DS+ FV ++LI  +S CG VE A  VF+       G++N     
Sbjct: 240 LQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIA 299

Query: 224 -------EEALNFFSQMRAV-GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
                  ++    F +M++V G K N  TF  VL AC     +   K           E 
Sbjct: 300 CAQHAHTDKTFELFDKMKSVGGMKANFITFLCVLYACSHAGLVEKGKYYFELMKDYGIEP 359

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMP 304
                  ++DL  ++G++++A ++ EEMP
Sbjct: 360 GTQHYSTMVDLLGRAGKLNDAVKLIEEMP 388



 Score = 39.7 bits (91), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 22/97 (22%), Positives = 47/97 (48%)

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           +L  G+Q+H   +K       ++++ LI+ Y+K      +  +F      +  +W+++IS
Sbjct: 35  SLPKGLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKSATTWSSVIS 94

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSAC 555
            ++ + L    L  F LM ++G  P++  F     +C
Sbjct: 95  SFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSC 131


>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 681

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 226/580 (38%), Positives = 327/580 (56%), Gaps = 20/580 (3%)

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR 297
           F P++FT   VLK C  L  ++  K  HG  LK  + +D +V  +L+ +Y+K GEI   R
Sbjct: 110 FVPDSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCR 169

Query: 298 RIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATME 357
           ++F+ M  KDV+ W+ +I  YA+       +EL   M +     + F++  ++   +   
Sbjct: 170 KVFDRMEDKDVVSWNSLIDGYARCG----EIELALEMFEEMPEKDSFSWTILIDGLSKSG 225

Query: 358 GLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIV 417
            L+    +     R+ + + V   NA+++ Y K G    + ELF + P+R+ VTWN+MI 
Sbjct: 226 KLEAARDVFD---RMPIRNSV-SWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMIT 281

Query: 418 GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM 477
           GY +  +  KA+ +F  ML E +     T    + A + + +L  G  VH   VK+ +  
Sbjct: 282 GYERNKQFTKALKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKT 341

Query: 478 DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQ 537
           D V+   LI+MY+KCGS+  A  VF  +       W ++I G  MHGL  + L++FD M 
Sbjct: 342 DGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMC 401

Query: 538 QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHL 597
           + G +P+ +TF+GVL+ACS+ G  E    YFK M  +YGI+P IEHY  ++ +L RAGHL
Sbjct: 402 RTGLKPHAITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHL 461

Query: 598 DKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIY 657
           ++A   IE +P + + +IW +LL     H N+ +G  +AQH++D  P+    +V+LSN+Y
Sbjct: 462 EEAKDTIERMPIKANKVIWTSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMY 521

Query: 658 AMARSWEKA-----------ASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLN 706
           A A  WEK              K+PG S IE+QG +H F  GD SH     I   L  + 
Sbjct: 522 AAAGLWEKVRQVREMMKKKGMKKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMK 581

Query: 707 MKSRKAGYIPDLSAVLRDVRED-EKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRIC 765
            K   AG+IPD + VL  + ED EKE  L  HSE+LA+AF L  +   SPIRIIKNLRIC
Sbjct: 582 KKLNVAGHIPDTTQVLLCLEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRIC 641

Query: 766 VDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            DCH   K++S I  REIIIRD  RFHHF+ G CSC DFW
Sbjct: 642 NDCHAVTKLLSHIYNREIIIRDGSRFHHFKSGSCSCKDFW 681



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 197/396 (49%), Gaps = 20/396 (5%)

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYT--KSGEISN 295
           F P N  F   L+ C    T R A   H  ++KT       V+  LL LY   +   +  
Sbjct: 13  FLPPNLHFP--LQNC---GTEREANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQY 67

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACAT 355
           A  +F+ + +  ++ W+ +I  Y +   S DA+ LFC++   FV P+ FT   VL+ CA 
Sbjct: 68  AHSLFDWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKLLCDFV-PDSFTLPCVLKGCAR 126

Query: 356 MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTM 415
           +  L  G QIH LV+++G   D FV ++L+ +Y+KCG +E   ++F     ++ V+WN++
Sbjct: 127 LGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSL 186

Query: 416 IVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY 475
           I GY + GE+  A+ MF +M E+       +++ ++   +    LE    V       N 
Sbjct: 187 IDGYARCGEIELALEMFEEMPEKD----SFSWTILIDGLSKSGKLEAARDVFDRMPIRN- 241

Query: 476 DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDL 535
               V  NA+I+ Y K G    A+ +FD M + + V+WN+MI+GY  +    + LK+F++
Sbjct: 242 ---SVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEV 298

Query: 536 MQQRGWRPNNLTFVGVLSACSNGGLLEQGEA-YFKSMVANYGIEPCIEHYTSMVSLLGRA 594
           M +    PN  T +G +SA S  G++  G   +  S +   G +      T ++ +  + 
Sbjct: 299 MLREDISPNYTTILGAVSAAS--GMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKC 356

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
           G +  A ++   IP +  +  W +++    +H  VE
Sbjct: 357 GSVKSALRVFRSIP-KKKLGHWTSVIVGLGMHGLVE 391



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 122/505 (24%), Positives = 235/505 (46%), Gaps = 46/505 (9%)

Query: 47  ITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYV--KL 104
           ++ S+  F   +    LQ+C      + A  +H   +K  +      ++ LL +Y   ++
Sbjct: 6   LSHSLQPFLPPNLHFPLQNCGTE---REANQLHALSIKTASLNHPSVSSRLLALYADPRI 62

Query: 105 NRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFL 164
           N L  A  LFD + E   +S+   I+ Y  + +  +A+ LF  L  +    + F     L
Sbjct: 63  NNLQYAHSLFDWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKLLCD-FVPDSFTLPCVL 121

Query: 165 KVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL------ 218
           K    +G  +    +   V K+G   + FV ++L+  +S CG +E  RKVFD +      
Sbjct: 122 KGCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVV 181

Query: 219 --------FNDC--FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCA 268
                   +  C   E AL  F +M     + ++F++  ++          ++KS    A
Sbjct: 182 SWNSLIDGYARCGEIELALEMFEEMP----EKDSFSWTILIDG--------LSKSGKLEA 229

Query: 269 LKTCYE-MDLYVAV---ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLS 324
            +  ++ M +  +V   A+++ Y K+G+ + A+ +F++MP++ ++ W+ MI  Y +    
Sbjct: 230 ARDVFDRMPIRNSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQF 289

Query: 325 IDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNAL 384
             A++LF  M +  ++PN  T +  + A + M  L  G  +HS +V+ G  +D  +   L
Sbjct: 290 TKALKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLL 349

Query: 385 MDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATE 444
           +++Y+KCG +++++ +F   PK+    W ++IVG    G V + + +F +M    +    
Sbjct: 350 IEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHA 409

Query: 445 VTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA----NALIDMYAKCGSITDARL 500
           +T+  VL AC+     E     H       YD  +  +      LID+  + G + +A+ 
Sbjct: 410 ITFIGVLNACSHAGFAE---DAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKD 466

Query: 501 VFDMMN-DWNEVSWNAMISGYSMHG 524
             + M    N+V W +++SG   HG
Sbjct: 467 TIERMPIKANKVIWTSLLSGSRKHG 491



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/389 (24%), Positives = 168/389 (43%), Gaps = 26/389 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +S +    L+ C +   LQ    IH  VLK G  +D F  + L+++Y K   +    K+F
Sbjct: 113 DSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVF 172

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D M +++ +S+ + I GY    +   A+ +F     E  E + F++T  +  L   G  E
Sbjct: 173 DRMEDKDVVSWNSLIDGYARCGEIELALEMF----EEMPEKDSFSWTILIDGLSKSGKLE 228

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------- 218
               VF  +       N+    A+I+ +   G    A+++FD +                
Sbjct: 229 AARDVFDRMPI----RNSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYE 284

Query: 219 FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            N  F +AL  F  M      PN  T    + A  G+ ++   +  H   +K+ ++ D  
Sbjct: 285 RNKQFTKALKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGV 344

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           +   L+++Y+K G + +A R+F  +PKK +  W+ +I       L    +ELF  M +  
Sbjct: 345 LGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTG 404

Query: 339 VAPNQFTFVSVLQACATME-GLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
           + P+  TF+ VL AC+      D       +    G+   +     L+DV  + G +E +
Sbjct: 405 LKPHAITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEA 464

Query: 398 VELFAESP-KRNHVTWNTMIVGYVQLGEV 425
            +     P K N V W +++ G  + G +
Sbjct: 465 KDTIERMPIKANKVIWTSLLSGSRKHGNI 493


>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 600

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 219/516 (42%), Positives = 312/516 (60%), Gaps = 14/516 (2%)

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCR-MRQAFVAPNQFTFVSVLQACATMEGLDLG 362
           P  D   ++ +I  Y+QT  S     LF R M +  V PN+FTF  VL+ CA +  L LG
Sbjct: 85  PSYDAFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLG 144

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGR--MENSVELFAESPKRNHVTWNTMIVGYV 420
             +H  VV+ G   DV V N L+ +Y   G    E + ++F +SPK + VTW+ MI G+V
Sbjct: 145 KCVHGCVVKFGFEEDVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFV 204

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV 480
           +LG   +A+ +F +M    V   E+T  SVL ACA L ALE G  V     K N    V 
Sbjct: 205 RLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKSVE 264

Query: 481 VANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG 540
           + NALIDM+AKCG++  A  +F  M+    VSW ++I+G +MHG   + + +FD M + G
Sbjct: 265 LCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENG 324

Query: 541 WRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKA 600
             P+++ F+GVLSACS+ GL+++G  YF SM  N+ I P +EHY  MV LL R G + +A
Sbjct: 325 ITPDDVAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEA 384

Query: 601 AKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMA 660
            + ++ +PF+P+ +IWR ++ AC     +++G   ++ ++  EP  E+ +VLLSNIYA  
Sbjct: 385 FEFVQKMPFEPNQIIWRTIITACHATGELKLGESISKELIKSEPMHESNYVLLSNIYAKL 444

Query: 661 RSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKS 709
           R WEK              K PG + IE    ++ F AGD SH     I  M++ +  + 
Sbjct: 445 RQWEKKTKVREMMDMRGMKKVPGSTMIEVNNEMYEFVAGDKSHDQYKEIYEMVDEMGREI 504

Query: 710 RKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCH 769
           +KAGY+P  S VL D+ E++KE  L+ HSEKLA+AFAL   PP + IRI+KNLR+C DCH
Sbjct: 505 KKAGYVPTTSQVLLDIDEEDKEDALYRHSEKLAIAFALLNTPPGTSIRIVKNLRVCEDCH 564

Query: 770 TAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +A K ISK+  REI++RD +RFHHF++G CSC DFW
Sbjct: 565 SATKFISKVYNREIVVRDRNRFHHFKNGLCSCRDFW 600



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 114/462 (24%), Positives = 187/462 (40%), Gaps = 33/462 (7%)

Query: 28  LSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGN 87
           ++ +  ++T +   +  T +T   S  N+ S  T + + I    LQ    I  +     +
Sbjct: 2   INLKLPINTPKTRLTEQTILTLLNSHCNTLSKLTQIHAFILKTGLQNNPLILTKFTSTSS 61

Query: 88  CLDL--FATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLF 145
            L+   +AT+ L          P +       P  +   F T I+ Y+ +        LF
Sbjct: 62  NLNSIHYATSFLF---------PPSHTTSTPTPSYDAFLFNTLIRAYSQTRDSKSNSFLF 112

Query: 146 -STLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSV 204
             T+ R G   N F F   LK    +G   L  CV  CV K G + +  V   LI  +  
Sbjct: 113 YRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLGKCVHGCVVKFGFEEDVHVLNTLIHMYCC 172

Query: 205 CG--CVEFARKVFD---------------GLFN-DCFEEALNFFSQMRAVGFKPNNFTFA 246
            G    EFA KVFD               G     C   A++ F +M+ +G  P+  T  
Sbjct: 173 LGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITMV 232

Query: 247 FVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK 306
            VL AC  L  + + K       K      + +  AL+D++ K G +  A ++F +M  +
Sbjct: 233 SVLSACADLGALELGKWVESYVEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQMDSR 292

Query: 307 DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIH 366
            ++ W+ +IA  A     +DAV LF  M +  + P+   F+ VL AC+    +D G    
Sbjct: 293 TIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIGVLSACSHSGLVDKGRYYF 352

Query: 367 SLVVR-VGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMIVGYVQLGE 424
             + R   ++  V     ++D+  + G ++ + E   + P + N + W T+I      GE
Sbjct: 353 GSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEFVQKMPFEPNQIIWRTIITACHATGE 412

Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
           + K     SK L +  P  E  Y  +    A L   E   +V
Sbjct: 413 L-KLGESISKELIKSEPMHESNYVLLSNIYAKLRQWEKKTKV 453


>gi|218546768|sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41080
          Length = 650

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 209/535 (39%), Positives = 317/535 (59%), Gaps = 12/535 (2%)

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L++ Y ++G++ NAR++F+EMP + +  W+ MIA   Q + + + + LF  M     +P+
Sbjct: 116 LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPD 175

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           ++T  SV    A +  + +G QIH   ++ GL  D+ V+++L  +Y + G++++   +  
Sbjct: 176 EYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIR 235

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
             P RN V WNT+I+G  Q G     + ++  M        ++T+ +VL +C+ LA    
Sbjct: 236 SMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQ 295

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G Q+H   +K      V V ++LI MY+KCG + DA   F    D +EV W++MIS Y  
Sbjct: 296 GQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGF 355

Query: 523 HGLSAEVLKVFDLM-QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
           HG   E +++F+ M +Q     N + F+ +L ACS+ GL ++G   F  MV  YG +P +
Sbjct: 356 HGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGL 415

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
           +HYT +V LLGRAG LD+A  +I  +P +  ++IW+ LL AC IH N E+ +   + IL 
Sbjct: 416 KHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ 475

Query: 642 FEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDT 690
            +P D A +VLL+N++A A+ W           +K   KE G+SW E++G VH F+ GD 
Sbjct: 476 IDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDR 535

Query: 691 SHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKM 750
           S +    I   L+ L ++ +  GY PD ++VL D+ E+EKE  L  HSEKLA+AFAL  +
Sbjct: 536 SQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMIL 595

Query: 751 PPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           P  +PIRIIKNLR+C DCH A K IS I  REI +RD  RFHHF +G CSCGD+W
Sbjct: 596 PEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 650



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 116/487 (23%), Positives = 221/487 (45%), Gaps = 57/487 (11%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N+  +   +QSC     L +   +HC ++  G   D F  N L+++Y KL   P A  ++
Sbjct: 43  NTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVY 102

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             M ++N +S    I GY  +   V A  +F        E+     T +           
Sbjct: 103 GRMRKKNYMSSNILINGYVRAGDLVNARKVFD-------EMPDRKLTTW----------- 144

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMR 234
                           NA +           G ++F        FN   EE L+ F +M 
Sbjct: 145 ----------------NAMIA----------GLIQFE-------FN---EEGLSLFREMH 168

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
            +GF P+ +T   V     GL ++ + +  HG  +K   E+DL V  +L  +Y ++G++ 
Sbjct: 169 GLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQ 228

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
           +   +   MP ++++ W+ +I   AQ       + L+  M+ +   PN+ TFV+VL +C+
Sbjct: 229 DGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCS 288

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
            +     G QIH+  +++G  S V V ++L+ +Y+KCG + ++ + F+E    + V W++
Sbjct: 289 DLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSS 348

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEE-QVPATEVTYSSVLRACASLAALEPGMQVHCLTV-K 472
           MI  Y   G+  +A+ +F+ M E+  +   EV + ++L AC+     + G+++  + V K
Sbjct: 349 MISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEK 408

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE-VSWNAMISGYSMHGLSAEVLK 531
             +   +     ++D+  + G +  A  +   M    + V W  ++S  ++H  +    +
Sbjct: 409 YGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQR 468

Query: 532 VFDLMQQ 538
           VF  + Q
Sbjct: 469 VFKEILQ 475



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 160/347 (46%), Gaps = 45/347 (12%)

Query: 323 LSID---AVELFC---RMRQAF------VAPNQFTFVSVLQACATMEGLDLGNQIHSLVV 370
           LS+D   A+   C    +R+AF      +  N   F   +Q+C T + L  G Q+H L+V
Sbjct: 12  LSVDPATAIATLCSKGNLREAFQRFRLNIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLV 71

Query: 371 RVGLLSDVFVSNALMDVYAKCG----------RME---------------------NSVE 399
             G  SD F+ N LM +Y+K G          RM                      N+ +
Sbjct: 72  VSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARK 131

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +F E P R   TWN MI G +Q     + + +F +M        E T  SV    A L +
Sbjct: 132 VFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRS 191

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
           +  G Q+H  T+K   ++D+VV ++L  MY + G + D  +V   M   N V+WN +I G
Sbjct: 192 VSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMG 251

Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
            + +G    VL ++ +M+  G RPN +TFV VLS+CS+  +  QG+      +   G   
Sbjct: 252 NAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAI-KIGASS 310

Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH 626
            +   +S++S+  + G L  AAK       +  VM W +++ A   H
Sbjct: 311 VVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVM-WSSMISAYGFH 356


>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 640

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 230/603 (38%), Positives = 340/603 (56%), Gaps = 45/603 (7%)

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKS--GEISNARRIFEEMPK 305
           +L+      T++     H   + T    D +VA  +L     S  G I  AR +F  + K
Sbjct: 38  ILRHLSSCKTLKDLTQIHAQTITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYRIRK 97

Query: 306 KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA-PNQFTFVSVLQACATMEGLDLGNQ 364
            D+   + +I  YA +   IDAV  +  M ++ V  P+  TF  +L+AC+ +  L LG  
Sbjct: 98  PDIFIANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEA 157

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK------------------ 406
           IHS V ++G  S+V VSN L+ +YA CG +E++  +F  +P+                  
Sbjct: 158 IHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGV 217

Query: 407 -------------RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
                        R+ V+W+ MI GYVQ     + + +F  M+ E++   E    + L A
Sbjct: 218 FKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSA 277

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
           CA L A+E G  +     + N  + V +  ALIDMY+KCGS+  A  VF  M + N ++W
Sbjct: 278 CAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAW 337

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA 573
           +AMI+G +++G   + L +F  M+ +G +PN +TF+G+L+ACS+  L+++G ++F SM +
Sbjct: 338 SAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTS 397

Query: 574 NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGR 633
            YG++P   H+  MV L GRAG LD+A  +I+ +PF+P+  IW ALL AC IH + E+G 
Sbjct: 398 IYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTELGE 457

Query: 634 LSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMV 682
              + +L+ +P     +VLLSNIYA    W++ A           SK PG S+I+    +
Sbjct: 458 QVGKRLLELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCSFIDLGDTI 517

Query: 683 HYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLA 742
           H F AGD+SH  + +I   L  ++ + + AGY PD   VL D+ E+EKE  L  HSEKLA
Sbjct: 518 HEFVAGDSSHPQLEMIYAKLGEMSQELKAAGYKPDTGQVLLDMDEEEKETALCHHSEKLA 577

Query: 743 LAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCG 802
           +AF L K  P + IRI KNLR+C DCH+A K+ISKI  REII+RD  RFHHF+DG CSC 
Sbjct: 578 IAFGLIKTDPGTTIRITKNLRVCADCHSATKLISKIYNREIIVRDRCRFHHFRDGSCSCM 637

Query: 803 DFW 805
           DFW
Sbjct: 638 DFW 640



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/335 (27%), Positives = 159/335 (47%), Gaps = 36/335 (10%)

Query: 225 EALNFFSQM--RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
           +A+ F+S+M   +V F P+  TF  +LKAC  + ++R+ ++ H    K  +  ++ V+  
Sbjct: 118 DAVVFYSEMTESSVVF-PDVHTFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSEVSVSNF 176

Query: 283 LLDLYT-------------------------------KSGEISNARRIFEEMPKKDVIPW 311
           L+ +Y                                K G   +ARR+FE MP +DV+ W
Sbjct: 177 LVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDVVSW 236

Query: 312 SFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR 371
           S MI  Y Q     + + LF  M    + PN+   V+ L ACA +  ++ G  I   + R
Sbjct: 237 SVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQWIERYMER 296

Query: 372 VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIM 431
             +   V +  AL+D+Y+KCG +E ++E+F +  ++N + W+ MI G    G+   A+ +
Sbjct: 297 KNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNL 356

Query: 432 FSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ-VHCLTVKANYDMDVVVANALIDMYA 490
           FS+M  + V   EVT+  +L AC+    ++ G    H +T       +      ++D+Y 
Sbjct: 357 FSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYG 416

Query: 491 KCGSITDARLVFDMMN-DWNEVSWNAMISGYSMHG 524
           + G +  A+ V   M    N   W A+++   +HG
Sbjct: 417 RAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHG 451



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 106/427 (24%), Positives = 169/427 (39%), Gaps = 63/427 (14%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLN--VYVKLNRLPDATKLFDEMPER 120
           L SC    DL     IH Q +  G   D F  + +L+         +P A  LF  + + 
Sbjct: 42  LSSCKTLKDLTQ---IHAQTITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYRIRKP 98

Query: 121 NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNP--FAFTAFLKVLVSMGWAELCPC 178
           +     T I+ Y  S   ++AV  +S +  E   + P    F   LK    +    L   
Sbjct: 99  DIFIANTLIRAYAFSPNPIDAVVFYSEM-TESSVVFPDVHTFPLLLKACSEIPSLRLGEA 157

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--------------------GL 218
           + + V+KLG  S   V   L+  ++ CG +E A  VFD                    G+
Sbjct: 158 IHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGV 217

Query: 219 FNDC---------------------------FEEALNFFSQMRAVGFKPNNFTFAFVLKA 251
           F                              F+E L  F  M     +PN       L A
Sbjct: 218 FKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSA 277

Query: 252 CLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPW 311
           C  L  +   +       +    + + +  AL+D+Y+K G +  A  +F +M +K+V+ W
Sbjct: 278 CAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAW 337

Query: 312 SFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVV 370
           S MI   A      DA+ LF +M    V PN+ TF+ +L AC+  + +D G +  HS+  
Sbjct: 338 SAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTS 397

Query: 371 RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTM-----IVGYVQLGE 424
             GL  +      ++D+Y + G ++ +  +    P K N   W  +     I G  +LGE
Sbjct: 398 IYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTELGE 457

Query: 425 -VGKAMI 430
            VGK ++
Sbjct: 458 QVGKRLL 464



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 97/400 (24%), Positives = 157/400 (39%), Gaps = 99/400 (24%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVK----------LNR 106
           H++   L++C +   L+    IH  V K G   ++  +N L+ +Y             +R
Sbjct: 137 HTFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDR 196

Query: 107 LPD---------------------ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLF 145
            P+                     A ++F+ MP+R+ +S+   I GY   S+F E +GLF
Sbjct: 197 TPECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLF 256

Query: 146 STLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVC 205
             +  E  E N       L     +G  E    +   + +        +GTALID +S C
Sbjct: 257 QDMMGEKIEPNESVLVNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKC 316

Query: 206 GCVEFARKVF---------------DGL-FNDCFEEALNFFSQMRAVGFKPNNFTFAFVL 249
           G VE A +VF               +GL  N   ++ALN FSQM   G KPN  TF  +L
Sbjct: 317 GSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGIL 376

Query: 250 KACLGLDTIRVAKSAHGC----ALKTCYEM--DLYVAVALLDLYTKSGEISNARRIFEEM 303
            AC     +       GC    ++ + Y +  + +    ++DLY ++G +  A+ + + M
Sbjct: 377 NACSHSKLVD-----EGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSM 431

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
           P K                                  PN   + ++L AC      +LG 
Sbjct: 432 PFK----------------------------------PNSAIWGALLNACRIHGDTELGE 457

Query: 364 QIHSLVVRVGLLSD---VFVSNALMDVYAKCGRMENSVEL 400
           Q+   ++ +        V +SN    +YA CGR +   EL
Sbjct: 458 QVGKRLLELDPNHGGRYVLLSN----IYAACGRWDRVAEL 493



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/205 (21%), Positives = 83/205 (40%), Gaps = 27/205 (13%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N      +L +C     ++    I   + +K   L +     L+++Y K   +  A +
Sbjct: 265 EPNESVLVNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALE 324

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV-----L 167
           +F +M E+N +++   I G  ++ Q  +A+ LFS +  +G + N   F   L       L
Sbjct: 325 VFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKL 384

Query: 168 VSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEAL 227
           V  G    C    +     G   NA     ++D +   G ++ A+ V             
Sbjct: 385 VDEG----CSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTV------------- 427

Query: 228 NFFSQMRAVGFKPNNFTFAFVLKAC 252
                ++++ FKPN+  +  +L AC
Sbjct: 428 -----IKSMPFKPNSAIWGALLNAC 447


>gi|15242443|ref|NP_198784.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171206|sp|Q9FK93.1|PP406_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39680; AltName: Full=Protein EMBRYO DEFECTIVE 2744
 gi|9758344|dbj|BAB08900.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332007080|gb|AED94463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 710

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 232/643 (36%), Positives = 352/643 (54%), Gaps = 28/643 (4%)

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFD---------------GLFNDCFE-EALNFFSQMR 234
           +A+   +LI+ +  C     ARK+FD               G  N  F+ E L  F  M 
Sbjct: 68  DAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMF 127

Query: 235 AVG-FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
             G  +PN F    V K+C     I   K  HGC LK       +V   L+ +Y+     
Sbjct: 128 FSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGN 187

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
             A R+ +++P  D+  +S  ++ Y +     + +++  +        N  T++S L+  
Sbjct: 188 GEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLF 247

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
           + +  L+L  Q+HS +VR G  ++V    AL+++Y KCG++  +  +F ++  +N     
Sbjct: 248 SNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNT 307

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
           T++  Y Q     +A+ +FSKM  ++VP  E T++ +L + A L+ L+ G  +H L +K+
Sbjct: 308 TIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKS 367

Query: 474 NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVF 533
            Y   V+V NAL++MYAK GSI DAR  F  M   + V+WN MISG S HGL  E L+ F
Sbjct: 368 GYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAF 427

Query: 534 DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGR 593
           D M   G  PN +TF+GVL ACS+ G +EQG  YF  ++  + ++P I+HYT +V LL +
Sbjct: 428 DRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSK 487

Query: 594 AGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLL 653
           AG    A   +   P +  V+ WR LL AC +  N  +G+  A++ ++  P D   +VLL
Sbjct: 488 AGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLL 547

Query: 654 SNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGML 702
           SNI+A +R WE           +   KEPG+SWI  +   H F A D  H ++ +I   +
Sbjct: 548 SNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKV 607

Query: 703 EWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNL 762
           + +  K +  GY PD++    DV E+++E  L  HSEKLA+A+ L K P  SP+ + KN+
Sbjct: 608 KEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNV 667

Query: 763 RICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           RIC DCH+AIK+ISKI +R I+IRD +RFHHF DG CSC D+W
Sbjct: 668 RICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 144/546 (26%), Positives = 254/546 (46%), Gaps = 32/546 (5%)

Query: 63  LQSCIQNDDLQTAMTIHCQVL---KKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPE 119
           L+ C  +  L+   +IH  ++   +     D +  N L+N+YVK      A KLFD MPE
Sbjct: 38  LKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPE 97

Query: 120 RNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHEL-NPFAFTAFLKVLVSMGWAELCPC 178
           RN +S+   ++GY  S    E + LF ++   G    N F  T   K   + G  E    
Sbjct: 98  RNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQ 157

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL--------------FNDC-- 222
              C  K G  S+ FV   L+  +S+C     A +V D L              + +C  
Sbjct: 158 FHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGA 217

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
           F+E L+   +     F  NN T+   L+    L  + +A   H   ++  +  ++    A
Sbjct: 218 FKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGA 277

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+++Y K G++  A+R+F++   +++   + ++  Y Q     +A+ LF +M    V PN
Sbjct: 278 LINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPN 337

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           ++TF  +L + A +  L  G+ +H LV++ G  + V V NAL+++YAK G +E++ + F+
Sbjct: 338 EYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFS 397

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
               R+ VTWNTMI G    G   +A+  F +M+        +T+  VL+AC+ +  +E 
Sbjct: 398 GMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQ 457

Query: 463 GMQ-VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN----DWNEVSWNAMI 517
           G+   + L  K +   D+     ++ + +K G   DA    D M     +W+ V+W  ++
Sbjct: 458 GLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAE---DFMRTAPIEWDVVAWRTLL 514

Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
           +   +        KV +   ++   PN+     +LS         +G A  +S++ N G+
Sbjct: 515 NACYVRRNYRLGKKVAEYAIEK--YPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGV 572

Query: 578 --EPCI 581
             EP +
Sbjct: 573 KKEPGV 578



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 124/280 (44%), Gaps = 18/280 (6%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
           +N+ +Y +SL+      DL  A+ +H ++++ G   ++ A   L+N+Y K  ++  A ++
Sbjct: 235 WNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRV 294

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           FD+   +N     T +  Y     F EA+ LFS +  +    N + F   L  +  +   
Sbjct: 295 FDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLL 354

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-FNDCF--------- 223
           +    +   V K G+ ++  VG AL++ ++  G +E ARK F G+ F D           
Sbjct: 355 KQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGC 414

Query: 224 ------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC-YEMD 276
                  EAL  F +M   G  PN  TF  VL+AC  +  +          +K    + D
Sbjct: 415 SHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPD 474

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKK-DVIPWSFMI 315
           +     ++ L +K+G   +A       P + DV+ W  ++
Sbjct: 475 IQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLL 514


>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Brachypodium distachyon]
          Length = 742

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 232/674 (34%), Positives = 359/674 (53%), Gaps = 82/674 (12%)

Query: 214 VFDGLFNDCF------EEALNFFSQMRAVGFKPNNFTFAFVLKACL-GLDTIRVAKSAHG 266
           +FD     CF      E  L  + +MR  G   + FTF F+ K C  G   + + +  H 
Sbjct: 69  LFDTALRACFRASSGPESPLILYRRMRRTGVCTDAFTFHFLFKCCARGRAHVLLCQMLHA 128

Query: 267 CALKTCYEMDL-YVAVALLDLYTKSGEISNARRIFEEMPKKD------------------ 307
              +T     +  V+  ++ +Y + G   +ARR F+++P KD                  
Sbjct: 129 ACFRTMLPSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLD 188

Query: 308 -------------VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
                        VI W+ +I+ Y++   + +AV+ F  M    + P++ T + +L ACA
Sbjct: 189 DAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACA 248

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE--------------- 399
            ++ L  G  +H LV   G+L    +  AL+D+YAKCG +  + E               
Sbjct: 249 QLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWN 308

Query: 400 -----------------LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPA 442
                            LF +   R+ VT+N++I GY+  G + +A+++F +M    + A
Sbjct: 309 AMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRA 368

Query: 443 TEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVF 502
              T  S+L ACASL AL  G  +H    +   ++D+ +  AL+DMY KCG + +A LVF
Sbjct: 369 DNFTMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVF 428

Query: 503 DMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLE 562
             M+  +  +W+AMI+G + +G+    L+ F  M+  G++PN++T++ +L+ACS+  LL+
Sbjct: 429 QAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCLLD 488

Query: 563 QGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           +G  YF+ M   + I P IEHY  M+ LLGR+G LD+A  L+  +P QP+ +IW ++L A
Sbjct: 489 EGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIWASILSA 548

Query: 623 CIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEP 671
           C +H +  + R +A+H+L  EP+++A +V L NIY  +R WE A+            K  
Sbjct: 549 CRVHKDANLARNAAEHLLKLEPDEDAVYVQLYNIYIDSRQWEDASQIRRLMEERGVKKAA 608

Query: 672 GLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKE 731
           G S I   G VH F   D +H  +  I  M+E +  + +  GY P  S +  DV E+EKE
Sbjct: 609 GYSSITVAGQVHKFIVCDRTHPQIMEITAMMEEITRRLKSVGYSPITSQITVDVDEEEKE 668

Query: 732 RYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRF 791
             L  HSEK+A+AF L  + P+ P+ IIKNLR+C DCH+AIK+IS+I  REII+RD  RF
Sbjct: 669 HALLAHSEKIAIAFGLISLAPNLPLHIIKNLRVCEDCHSAIKLISRIWNREIIVRDRSRF 728

Query: 792 HHFQDGCCSCGDFW 805
           HHF+DG CSC DFW
Sbjct: 729 HHFRDGTCSCNDFW 742



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 102/391 (26%), Positives = 161/391 (41%), Gaps = 78/391 (19%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D  A   +++   KL  L DA  L    P RN IS+   I GY+ + +  EAV  F+++ 
Sbjct: 170 DAVAWTTVISGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSML 229

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFA-CVYKLGHDSNAFVG----TALIDAFSV 204
            +G E +       L        A+L   VF   ++KL  +    +      ALID ++ 
Sbjct: 230 SDGIEPDEVTVIGLLSAC-----AQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAK 284

Query: 205 CGCVEFARKVFDGL---------------------------------------FNDC--- 222
           CG +  A +VFD L                                       FN     
Sbjct: 285 CGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITG 344

Query: 223 ------FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
                   EAL  F QMR    + +NFT   +L AC  L  +   ++ H C  +   E+D
Sbjct: 345 YIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHACIEQRLVEVD 404

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           +Y+  ALLD+Y K G +  A  +F+ M  +DV  WS MIA  A   +   A+E F  M+ 
Sbjct: 405 IYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKV 464

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLG----------NQIHSLVVRVGLLSDVFVSNALMD 386
               PN  T++++L AC+    LD G          + I  L+   G          ++D
Sbjct: 465 DGFQPNSVTYIAILTACSHSCLLDEGRLYFEEMRLLHNIRPLIEHYG---------CMID 515

Query: 387 VYAKCGRMENSVELFAESP-KRNHVTWNTMI 416
           +  + G ++ +++L    P + N V W +++
Sbjct: 516 LLGRSGLLDEAMDLVRTMPMQPNAVIWASIL 546



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 123/286 (43%), Gaps = 49/286 (17%)

Query: 95  NVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHE 154
           N +++ Y KL  +  A  LFD+M +R+ ++F + I GY    +  EA+ LF  + R    
Sbjct: 308 NAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLR 367

Query: 155 LNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKV 214
            + F   + L    S+G       + AC+ +   + + ++GTAL+D +  CG VE A  V
Sbjct: 368 ADNFTMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLV 427

Query: 215 FDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTI 258
           F  +                FN   + AL +F  M+  GF+PN+ T+  +L AC      
Sbjct: 428 FQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTAC------ 481

Query: 259 RVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARY 318
                +H C L    E  LY        + +   + N R + E         +  MI   
Sbjct: 482 -----SHSCLLD---EGRLY--------FEEMRLLHNIRPLIEH--------YGCMIDLL 517

Query: 319 AQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
            ++ L  +A++L   +R   + PN   + S+L AC   +  +L   
Sbjct: 518 GRSGLLDEAMDL---VRTMPMQPNAVIWASILSACRVHKDANLARN 560



 Score = 42.7 bits (99), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 54/254 (21%), Positives = 104/254 (40%), Gaps = 23/254 (9%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L +C     L     +H  + ++   +D++    LL++Y+K  R+ +A+ +F  M  R+ 
Sbjct: 377 LTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDV 436

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
            ++   I G   +     A+  F  +  +G + N   + A L             C  +C
Sbjct: 437 HTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTA-----------CSHSC 485

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-FNDCFEEALNFFSQMRAVGFKPN 241
           +     D        +    ++   +E    + D L  +   +EA++    +R +  +PN
Sbjct: 486 LL----DEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDL---VRTMPMQPN 538

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNA---RR 298
              +A +L AC       +A++A    LK   + D  V V L ++Y  S +  +A   RR
Sbjct: 539 AVIWASILSACRVHKDANLARNAAEHLLKLEPDED-AVYVQLYNIYIDSRQWEDASQIRR 597

Query: 299 IFEEMPKKDVIPWS 312
           + EE   K    +S
Sbjct: 598 LMEERGVKKAAGYS 611


>gi|297824049|ref|XP_002879907.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325746|gb|EFH56166.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 565

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 210/535 (39%), Positives = 320/535 (59%), Gaps = 12/535 (2%)

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L++ Y ++G++ +AR++F+EMP + +  W+ MIA   Q + + + + LF  M     +P+
Sbjct: 31  LINGYVRAGDLVSARKVFDEMPDRKLTTWNAMIAGLIQFEYNEEGLSLFREMHGLGFSPD 90

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           ++T  SV    A +  + +G QIH   ++ GL  D+ V+++L  +Y + G++++   +  
Sbjct: 91  EYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIR 150

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
             P RN V WNT+I+G  Q G     + ++  M        ++T+ +VL +C+ LA    
Sbjct: 151 SMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQ 210

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G Q+H   +K      V V ++LI MY+KCG + DA   F    D +EV W++MIS Y  
Sbjct: 211 GQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGF 270

Query: 523 HGLSAEVLKVFDLM-QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
           HG   E +K+F+ M +Q     N + F+ +L ACS+ GL ++G   F  MV  YG +P +
Sbjct: 271 HGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGL 330

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
           +HYT +V LLGRAG LD+A  +I+ +P +P  +IW+ LL AC IH N E+ +   + IL+
Sbjct: 331 KHYTCVVDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSACNIHKNAEMAQKVFKEILE 390

Query: 642 FEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDT 690
            +P D A +VLL+N++A A+ W           +K   KE G+SW E++G VH F+ GD 
Sbjct: 391 IDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDR 450

Query: 691 SHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKM 750
           S +    I   L+ L ++ +  GY PD ++VL D+ E+EKE  L  HSEKLA+AFAL  +
Sbjct: 451 SQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMIL 510

Query: 751 PPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           P  +PIRIIKNLR+C DCH A K IS I+ REI +RD  RFHHF +G CSCGD+W
Sbjct: 511 PEGAPIRIIKNLRVCSDCHVAFKYISVIMNREITLRDGSRFHHFINGKCSCGDYW 565



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 184/370 (49%), Gaps = 19/370 (5%)

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GLFN-DCFEEA 226
           +Y+     N      LI+ +   G +  ARKVFD               GL   +  EE 
Sbjct: 16  LYERMRKKNFMSSNILINGYVRAGDLVSARKVFDEMPDRKLTTWNAMIAGLIQFEYNEEG 75

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           L+ F +M  +GF P+ +T   V     GL ++ + +  HG A+K   E+DL V  +L  +
Sbjct: 76  LSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLELDLVVNSSLAHM 135

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y ++G++ +   +   MP ++++ W+ +I   AQ       + L+  M+ +   PN+ TF
Sbjct: 136 YMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITF 195

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
           V+VL +C+ +     G QIH+  +++G  S V V ++L+ +Y+KCG + ++ + F+E   
Sbjct: 196 VTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERED 255

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE-QVPATEVTYSSVLRACASLAALEPGMQ 465
            + V W++MI  Y   G+  +A+ +F+ M E+ ++   EV + ++L AC+     + G++
Sbjct: 256 EDEVMWSSMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKGLE 315

Query: 466 VHCLTV-KANYDMDVVVANALIDMYAKCGSITDARLVFDMMN-DWNEVSWNAMISGYSMH 523
           +  + V K  +   +     ++D+  + G +  A  +   M    + V W  ++S  ++H
Sbjct: 316 LFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSACNIH 375

Query: 524 GLSAEVLKVF 533
             +    KVF
Sbjct: 376 KNAEMAQKVF 385



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 124/248 (50%), Gaps = 2/248 (0%)

Query: 381 SNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQV 440
           SN L++ Y + G + ++ ++F E P R   TWN MI G +Q     + + +F +M     
Sbjct: 28  SNILINGYVRAGDLVSARKVFDEMPDRKLTTWNAMIAGLIQFEYNEEGLSLFREMHGLGF 87

Query: 441 PATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARL 500
              E T  SV    A L ++  G Q+H   +K   ++D+VV ++L  MY + G + D  +
Sbjct: 88  SPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLELDLVVNSSLAHMYMRNGKLQDGEI 147

Query: 501 VFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGL 560
           V   M   N V+WN +I G + +G    VL ++ +M+  G RPN +TFV VLS+CS+  +
Sbjct: 148 VIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAI 207

Query: 561 LEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
             QG+      +   G    +   +S++S+  + G L  AAK       +  VM W +++
Sbjct: 208 RGQGQQIHAEAI-KIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVM-WSSMI 265

Query: 621 GACIIHNN 628
            A   H  
Sbjct: 266 SAYGFHGQ 273



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/365 (23%), Positives = 159/365 (43%), Gaps = 23/365 (6%)

Query: 71  DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQ 130
           DL +A+ ++ ++ KK    +  ++N+L+N YV+   L  A K+FDEMP+R   ++   I 
Sbjct: 9   DLPSAVALYERMRKK----NFMSSNILINGYVRAGDLVSARKVFDEMPDRKLTTWNAMIA 64

Query: 131 GYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDS 190
           G        E + LF  +H  G   + +   +       +    +   +     K G + 
Sbjct: 65  GLIQFEYNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLEL 124

Query: 191 NAFVGTAL----------------IDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMR 234
           +  V ++L                I +  V   V +   +     N C E  L  +  M+
Sbjct: 125 DLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMK 184

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
             G +PN  TF  VL +C  L      +  H  A+K      + V  +L+ +Y+K G + 
Sbjct: 185 ISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLG 244

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQAC 353
           +A + F E   +D + WS MI+ Y       +A++LF  M  Q  +  N+  F+++L AC
Sbjct: 245 DAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYAC 304

Query: 354 ATMEGLDLGNQIHSLVV-RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVT 411
           +     D G ++  ++V + G    +     ++D+  + G ++ +  +    P K + V 
Sbjct: 305 SHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIKSMPIKPDPVI 364

Query: 412 WNTMI 416
           W T++
Sbjct: 365 WKTLL 369



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 38/166 (22%), Positives = 62/166 (37%), Gaps = 33/166 (19%)

Query: 486 IDMYAKCG-------------------------------SITDARLVFDMMNDWNEVSWN 514
           + MY+K G                                +  AR VFD M D    +WN
Sbjct: 1   MSMYSKLGDLPSAVALYERMRKKNFMSSNILINGYVRAGDLVSARKVFDEMPDRKLTTWN 60

Query: 515 AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
           AMI+G      + E L +F  M   G+ P+  T   V S  +    +  G+         
Sbjct: 61  AMIAGLIQFEYNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQ-IHGYAIK 119

Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
           YG+E  +   +S+  +  R G L     +I  +P + +++ W  L+
Sbjct: 120 YGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVR-NLVAWNTLI 164


>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
 gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
          Length = 667

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 216/603 (35%), Positives = 338/603 (56%), Gaps = 42/603 (6%)

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE------------ 292
           F+ +L++C+ L ++   K  H   + +    D +++  LL+ Y+K G+            
Sbjct: 65  FSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNMP 124

Query: 293 -------------------ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
                              + +A+++F+EM ++++  W+ MIA   Q + +  A+ LF  
Sbjct: 125 RRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKE 184

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           M      P++FT  SVL+ CA +  L  G ++H+ +++ G      V ++L  +Y K G 
Sbjct: 185 MYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGS 244

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           + +  +L    P R  V WNT+I G  Q G   + +  ++ M        ++T+ SVL A
Sbjct: 245 LSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSA 304

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
           C+ LA L  G Q+H   +KA     + V ++LI MY++ G + D+   F    +++ V W
Sbjct: 305 CSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLW 364

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA 573
           ++MI+ Y  HG   E L++F  M+      N +TF+ +L ACS+ GL E+G  YF  MV 
Sbjct: 365 SSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVK 424

Query: 574 NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGR 633
            Y ++P IEHYT +V LLGRAG L++A  +I  +P QP  +IW+ LL AC +H   E+  
Sbjct: 425 KYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAE 484

Query: 634 LSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMV 682
             ++ I+  +P D A++VLLSNI+A AR+W           +++  KEPG+SW+E + +V
Sbjct: 485 RISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISWLELKNLV 544

Query: 683 HYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLA 742
           H F  GD SH     I   L+ L  + ++ GY+P+L +VL D+  +EKE  L  HSEK A
Sbjct: 545 HQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLAHHSEKFA 604

Query: 743 LAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCG 802
           +AFAL     + PIR++KNLR+C DCH AIK IS+I  REII+RD  RFHHF+DG CSCG
Sbjct: 605 IAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHFKDGECSCG 664

Query: 803 DFW 805
           ++W
Sbjct: 665 NYW 667



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 127/480 (26%), Positives = 225/480 (46%), Gaps = 65/480 (13%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           LQSCI+   L     +H  ++  G   D F +N LLN Y KL                  
Sbjct: 69  LQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLG----------------- 111

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
                         QF  ++ LFS + R     N  +F   +   + +G  E    +F  
Sbjct: 112 --------------QFKSSLVLFSNMPRR----NVMSFNILINGYLQLGDLESAQKLF-- 151

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNN 242
                 D  +    A  +A  + G  +F        FN   ++AL+ F +M  +GF P+ 
Sbjct: 152 ------DEMSERNIATWNAM-IAGLTQFE-------FN---KQALSLFKEMYGLGFLPDE 194

Query: 243 FTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEE 302
           FT   VL+ C GL ++   +  H C LK  +E+   V  +L  +Y KSG +S+  ++ + 
Sbjct: 195 FTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKS 254

Query: 303 MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG 362
           MP + V+ W+ +IA  AQ     + +  +  M+ A   P++ TFVSVL AC+ +  L  G
Sbjct: 255 MPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQG 314

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
            QIH+ V++ G  S + V ++L+ +Y++ G +E+S++ F +    + V W++MI  Y   
Sbjct: 315 QQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFH 374

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
           G   +A+ +F +M + ++ A EVT+ S+L AC+     E G +   L VK  Y +   + 
Sbjct: 375 GRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVK-KYKLKPRIE 433

Query: 483 N--ALIDMYAKCGSITDAR-LVFDMMNDWNEVSWNAMISGYSMHG-------LSAEVLKV 532
           +   ++D+  + G + +A  ++  M    + + W  +++   +H        +S E++K+
Sbjct: 434 HYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAERISEEIIKL 493


>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Vitis vinifera]
          Length = 677

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 218/601 (36%), Positives = 338/601 (56%), Gaps = 54/601 (8%)

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           N  FE +++ F  M  +  +P+  T  FVLK+   L  + + +  HG  +K   E D +V
Sbjct: 116 NSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFV 175

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKD----VIPWSFMIARYAQTDLSIDAVELFCRMR 335
            V+L+D+Y K GE+    ++F+E P+++    ++ W+ +I    +      A  LF    
Sbjct: 176 RVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLF---- 231

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
           +A    N  ++                                   N+L++ + + G ++
Sbjct: 232 EAMPERNAGSW-----------------------------------NSLINGFVRNGDLD 256

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
            + ELF + P++N V+W TMI G+ Q G+  KA+ MF +MLEE V   ++T  S L AC 
Sbjct: 257 RARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACT 316

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
            + AL+ G ++H       + ++  +  AL+DMYAKCG+I  A  VF      + ++W+ 
Sbjct: 317 KIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSV 376

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           MI G+++HG   + L+ F  M+  G  P+ + F+ +L+ACS+ G ++QG  +F+SM  +Y
Sbjct: 377 MIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDY 436

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS 635
            IEP ++HYT +V LLGRAG LD+A   I+ +P  P  +IW AL  AC  H N+E+  L+
Sbjct: 437 SIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELT 496

Query: 636 AQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHY 684
           A+ +L  EP+   ++V LSN+YA    WE           +   K+PG S+IE +G VH 
Sbjct: 497 AEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDPGWSYIEVEGQVHS 556

Query: 685 FRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALA 744
           F AGD +H     I   LE +   +++ GY+P+ + VL ++ E+EKE  L  HSEKLALA
Sbjct: 557 FVAGDHAHVRAEEISLKLEEITASAKQEGYMPETAWVLHNIEEEEKEDALGSHSEKLALA 616

Query: 745 FALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
           F L    P S IRI+KNLR+C DCH+ +K  SK+ +REII+RD+ RFHHF+DG CSCGD+
Sbjct: 617 FGLISTAPGSTIRIVKNLRVCGDCHSMMKYASKLSRREIILRDIKRFHHFKDGTCSCGDY 676

Query: 805 W 805
           W
Sbjct: 677 W 677



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 116/505 (22%), Positives = 226/505 (44%), Gaps = 27/505 (5%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           IH Q+       +      L++    L  L  A  +F      N   F   I+G   +S+
Sbjct: 59  IHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLAENSR 118

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
           F  +V  F  + R     +       LK + ++    L  C+   V KLG + ++FV  +
Sbjct: 119 FEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRVS 178

Query: 198 LIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDT 257
           L+D +   G + F  ++FD        E++                 +  ++  C  +  
Sbjct: 179 LVDMYVKIGELGFGLQLFDESPQRNKAESI---------------LLWNVLINGCCKVGD 223

Query: 258 IRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIAR 317
           +  A S      +   E +     +L++ + ++G++  AR +F +MP+K+V+ W+ MI  
Sbjct: 224 LSKAAS----LFEAMPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMING 279

Query: 318 YAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD 377
           ++Q      A+ +F RM +  V PN  T VS L AC  +  L +G +IH+ +   G   +
Sbjct: 280 FSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLN 339

Query: 378 VFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
             +  AL+D+YAKCG ++++  +F E+  ++ +TW+ MI G+   G   +A+  F KM  
Sbjct: 340 RGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKS 399

Query: 438 EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSI 495
             +   EV + ++L AC+    ++ G+     +++ +Y ++  + +   ++D+  + G +
Sbjct: 400 AGINPDEVIFLAILTACSHSGNVDQGLNFF-ESMRLDYSIEPTMKHYTLIVDLLGRAGRL 458

Query: 496 TDA-RLVFDMMNDWNEVSWNAMISGYSMH-GLSAEVLKVFDLMQQRGWRPNNLTFVGVLS 553
            +A   +  M  + + V W A+      H  +    L    L+Q     P +  F+  + 
Sbjct: 459 DEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVY 518

Query: 554 ACSNGGLLEQGEAYFKSMVANYGIE 578
           A    G  E  E   ++++ N G+E
Sbjct: 519 AAV--GRWEDVE-RVRTLMKNRGVE 540



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/399 (24%), Positives = 172/399 (43%), Gaps = 31/399 (7%)

Query: 71  DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFV---- 126
           D+     +H  V+K G   D F    L+++YVK+  L    +LFDE P+RN    +    
Sbjct: 153 DVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWN 212

Query: 127 TTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKL 186
             I G        +A  LF  +     E N  ++ + +   V  G  +    +F  +   
Sbjct: 213 VLINGCCKVGDLSKAASLFEAMP----ERNAGSWNSLINGFVRNGDLDRARELFVQM--- 265

Query: 187 GHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFA 246
             + N    T +I+ FS                N   E+AL+ F +M   G +PN+ T  
Sbjct: 266 -PEKNVVSWTTMINGFSQ---------------NGDHEKALSMFWRMLEEGVRPNDLTVV 309

Query: 247 FVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK 306
             L AC  +  ++V +  H       ++++  +  AL+D+Y K G I +A R+F E   K
Sbjct: 310 SALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGK 369

Query: 307 DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQI 365
           D++ WS MI  +A       A++ F +M+ A + P++  F+++L AC+    +D G N  
Sbjct: 370 DLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFF 429

Query: 366 HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMIVGYVQLGE 424
            S+ +   +   +     ++D+  + GR++ ++      P   + V W  +         
Sbjct: 430 ESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKN 489

Query: 425 VGKAMIMFSKM--LEEQVPATEVTYSSVLRACASLAALE 461
           +  A +   K+  LE + P + V  S+V  A      +E
Sbjct: 490 IEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVE 528



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/314 (21%), Positives = 122/314 (38%), Gaps = 61/314 (19%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           EF+S    + +   ++  +L   + +  +  ++     +   NVL+N   K+  L  A  
Sbjct: 170 EFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAAS 229

Query: 113 LFDEMPER-------------------------------NTISFVTTIQGYTVSSQFVEA 141
           LF+ MPER                               N +S+ T I G++ +    +A
Sbjct: 230 LFEAMPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKA 289

Query: 142 VGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDA 201
           + +F  +  EG   N     + L     +G  ++   +   +   G   N  +GTAL+D 
Sbjct: 290 LSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDM 349

Query: 202 FSVCGCVEFARKVF------DGL----------FNDCFEEALNFFSQMRAVGFKPNNFTF 245
           ++ CG ++ A +VF      D L           + CF++AL  F +M++ G  P+   F
Sbjct: 350 YAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIF 409

Query: 246 AFVLKAC-------LGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
             +L AC        GL+     +      L    E  +     ++DL  ++G +  A  
Sbjct: 410 LAILTACSHSGNVDQGLNFFESMR------LDYSIEPTMKHYTLIVDLLGRAGRLDEALS 463

Query: 299 IFEEMP-KKDVIPW 311
             + MP   D + W
Sbjct: 464 FIQSMPINPDFVIW 477



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 76/348 (21%), Positives = 135/348 (38%), Gaps = 74/348 (21%)

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           F+ ++ A  T+  L   +QIH+ +    L S+  V   L+        ++ ++ +F    
Sbjct: 43  FIPLIHASNTLPQL---HQIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFD 99

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
             N   +N +I G  +      ++  F  ML   +    +T   VL++ A+L  +  G  
Sbjct: 100 HPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRC 159

Query: 466 VHCLTVKANYDMDVVVANALIDMYA----------------------------------- 490
           +H   +K   + D  V  +L+DMY                                    
Sbjct: 160 LHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCC 219

Query: 491 KCGSITDARLVFDMMNDWNEVSWNA-------------------------------MISG 519
           K G ++ A  +F+ M + N  SWN+                               MI+G
Sbjct: 220 KVGDLSKAASLFEAMPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMING 279

Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
           +S +G   + L +F  M + G RPN+LT V  L AC+  G L+ GE     + +N G + 
Sbjct: 280 FSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSN-GFQL 338

Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQP----SVMIWRALLGAC 623
                T++V +  + G++  A+++      +     SVMIW   +  C
Sbjct: 339 NRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGC 386


>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
 gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
          Length = 695

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 231/641 (36%), Positives = 347/641 (54%), Gaps = 63/641 (9%)

Query: 193 FVGTALIDAFSVCGCVEFARKVFDGL-------FNDCFE---------EALNFFSQMRAV 236
           F   A++  ++  G VE  R +FD +       +N              AL  F +M+  
Sbjct: 90  FSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKE 149

Query: 237 GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNA 296
           G KP  +T   VL AC  L  +R  K  HG  +      +++V  AL DLY + GEI  A
Sbjct: 150 GLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQA 209

Query: 297 RRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM 356
           RR+F+ M  ++V+ W+ MI+ Y +       ++LF  M+ + + P+Q T  SVL A    
Sbjct: 210 RRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGA---- 265

Query: 357 EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMI 416
                                          Y + G ++ + ++F E  +++ V W  MI
Sbjct: 266 -------------------------------YIQAGYIDEARKVFGEIREKDEVCWTIMI 294

Query: 417 VGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD 476
           VG  Q G+   A+++FS+ML E       T SSV+ +CA LA+L  G  VH        +
Sbjct: 295 VGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVN 354

Query: 477 MDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLM 536
            D++V++AL+DMY KCG   DA  +F  M   N VSWN+MI GY+++G   E L +++ M
Sbjct: 355 DDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENM 414

Query: 537 QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGH 596
            +   +P+++TFVGVLSAC + GL+E+G+ YF SM   +G+EP  +HY  MV+L GR+GH
Sbjct: 415 LEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGH 474

Query: 597 LDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNI 656
           +DKA  LI  +  +P+ +IW  +L  C++  +++ G ++A+ +++  P +   +++LSN+
Sbjct: 475 MDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYIMLSNM 534

Query: 657 YAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWL 705
           YA    W+  AS           K    SWIE    VH F A D +H D  II   L  L
Sbjct: 535 YAARGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAKIIHVQLNRL 594

Query: 706 NMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPS-SPIRIIKNLRI 764
             K ++AG+ P+ + VL D  EDEK   +  HSEKLALA+ L K P   +PIRIIKN+R 
Sbjct: 595 IRKLQEAGFSPNTNLVLHDFGEDEKLESINYHSEKLALAYGLIKKPHGVTPIRIIKNIRT 654

Query: 765 CVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           C DCH  +K +S I +R +I+RD +RFHHF +G CSC D+W
Sbjct: 655 CADCHIFMKFVSNITRRPVILRDSNRFHHFVEGKCSCKDYW 695



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 132/495 (26%), Positives = 210/495 (42%), Gaps = 114/495 (23%)

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSID--------- 326
           D ++   LL+LY KSGEIS+AR++F+EM ++D   W+ M++ YA++ L  D         
Sbjct: 57  DTFIHNRLLNLYAKSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMP 116

Query: 327 ----------------------AVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
                                 A+ +F RM++  + P ++T VSVL AC  +  L  G Q
Sbjct: 117 SRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQ 176

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
           IH  ++   L  +VFV NAL D+YA+CG ++ +  LF     RN VTWN MI GY++  +
Sbjct: 177 IHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNRQ 236

Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA 484
             K + +F +M    +   +VT SSVL A                               
Sbjct: 237 PEKCIDLFHEMQVSNLKPDQVTASSVLGA------------------------------- 265

Query: 485 LIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPN 544
               Y + G I +AR VF  + + +EV W  MI G + +G   + L +F  M     RP+
Sbjct: 266 ----YIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPD 321

Query: 545 NLTFVGVLSACSN-----GGLLEQGEAYFKSMVANYGIEPC------------------- 580
             T   V+S+C+       G +  G+A+   +  +  +                      
Sbjct: 322 GYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFS 381

Query: 581 ------IEHYTSMVSLLGRAGHLDKAAKLIEGI---PFQPSVMIWRALLGACIIHNNVEI 631
                 +  + SM+      G   +A  L E +     +P  + +  +L AC+    VE 
Sbjct: 382 TMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEE 441

Query: 632 GR-----LSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA------SKEPGLSWIENQG 680
           G+     +S QH L+  P+  A  V   N++  +   +KA       S+EP  S I    
Sbjct: 442 GKEYFCSMSDQHGLEPTPDHYACMV---NLFGRSGHMDKAVDLISSMSQEPN-SLIWTTV 497

Query: 681 MVHYFRAGDTSHADM 695
           +      GD  H +M
Sbjct: 498 LSVCVMKGDIKHGEM 512



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 108/261 (41%), Gaps = 24/261 (9%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           + ++ ++ + SC +   L     +H +    G   DL  ++ L+++Y K     DA  +F
Sbjct: 321 DGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIF 380

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             M  RN +S+ + I GY ++ Q +EA+ L+  +  E  + +   F   L   V  G  E
Sbjct: 381 STMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSACVHAGLVE 440

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMR 234
                F  +     D +    T   D ++ C    F R       +   ++A++  S M 
Sbjct: 441 EGKEYFCSM----SDQHGLEPTP--DHYA-CMVNLFGR-------SGHMDKAVDLISSMS 486

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA---LLDLYTKSG 291
               +PN+  +  VL  C+    I+  + A  C +    E++ + AV    L ++Y   G
Sbjct: 487 Q---EPNSLIWTTVLSVCVMKGDIKHGEMAARCLI----ELNPFNAVPYIMLSNMYAARG 539

Query: 292 EISNARRIFEEMPKKDVIPWS 312
              +   I   M  K V  +S
Sbjct: 540 RWKDVASIRSLMKSKHVKKFS 560


>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
          Length = 637

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 209/574 (36%), Positives = 335/574 (58%), Gaps = 15/574 (2%)

Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
           +  F + +C    ++    + H   +K+    D ++   L+ +Y K G   +A+R+F+EM
Sbjct: 67  SLVFAISSC---TSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEM 123

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMR-QAFVAPNQFTFVSVLQACATMEGLDLG 362
           P KD++ W+ +++  +        +  FCRMR ++   PN+ T +SV+ ACA M  LD G
Sbjct: 124 PNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEG 183

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
             +H +VV++G+     V N+L+++Y K G ++ + +LF E P R+ V+WN+M+V +   
Sbjct: 184 KSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHN 243

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
           G   K M +F+ M    +   + T  ++LRAC           +H    +  ++ D+++A
Sbjct: 244 GYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIA 303

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
            AL+++YAK G +  +  +F+ + D + ++W AM++GY++H    E +K+FDLM + G  
Sbjct: 304 TALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVE 363

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
            +++TF  +LSACS+ GL+E+G+ YF+ M   Y +EP ++HY+ MV LLGR+G L+ A +
Sbjct: 364 VDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYE 423

Query: 603 LIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARS 662
           LI+ +P +PS  +W ALLGAC ++ NVE+G+  A+ +L  +P D   +++LSNIY+ A  
Sbjct: 424 LIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGL 483

Query: 663 W-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRK 711
           W           E+  ++ PG S+IE+   +H F  GD  H   + I   LE L  K R+
Sbjct: 484 WRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIRE 543

Query: 712 AGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTA 771
           AG  P    VL D+ E+ K   +  HSEKLA+AF L       P+ I KNLRIC DCH+ 
Sbjct: 544 AGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHST 603

Query: 772 IKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            K  S + +R IIIRD  RFHHF DG CSC D+W
Sbjct: 604 AKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 637



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 188/409 (45%), Gaps = 43/409 (10%)

Query: 42  STTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVY 101
           S    + F++S   S SY ++               IH +V+K  N  D F  + L+++Y
Sbjct: 63  SIVQSLVFAISSCTSVSYCSA---------------IHARVIKSLNYSDGFIGDRLVSMY 107

Query: 102 VKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHRE-GHELNPFAF 160
            KL    DA +LFDEMP ++ +S+ + + G +        +  F  +  E G + N    
Sbjct: 108 FKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTL 167

Query: 161 TAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-- 218
            + +     MG  +    +   V KLG    A V  +LI+ +   G ++ A ++F+ +  
Sbjct: 168 LSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPV 227

Query: 219 --------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSA 264
                          N   E+ ++ F+ M+  G  P+  T   +L+AC      R A+S 
Sbjct: 228 RSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESI 287

Query: 265 HGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLS 324
           H    +  +  D+ +A ALL+LY K G ++ +  IFEE+  +D I W+ M+A YA     
Sbjct: 288 HAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACG 347

Query: 325 IDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN---QIHSLVVRVGLLSDVFVS 381
            +A++LF  M +  V  +  TF  +L AC+    ++ G    +I S V RV    D +  
Sbjct: 348 REAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHY-- 405

Query: 382 NALMDVYAKCGRMENSVELFAESP-KRNHVTWNTM-----IVGYVQLGE 424
           + ++D+  + GR+E++ EL    P + +   W  +     + G V+LG+
Sbjct: 406 SCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGK 454



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/301 (21%), Positives = 131/301 (43%), Gaps = 21/301 (6%)

Query: 22  NAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQ 81
           N+ + GLS +  L    C N+     T S  + N  +  + + +C     L    ++H  
Sbjct: 132 NSLMSGLSGRGYLGA--CLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGV 189

Query: 82  VLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEA 141
           V+K G        N L+N+Y KL  L  A++LF+EMP R+ +S+ + +  +  +    + 
Sbjct: 190 VVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKG 249

Query: 142 VGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDA 201
           + LF+ + R G   +     A L+     G       + A +++ G +++  + TAL++ 
Sbjct: 250 MDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNL 309

Query: 202 FSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTF 245
           ++  G +  +  +F+ +                 + C  EA+  F  M   G + ++ TF
Sbjct: 310 YAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTF 369

Query: 246 AFVLKACLGLDTIRVAKSAHGCALKTCYEMD--LYVAVALLDLYTKSGEISNARRIFEEM 303
             +L AC     +   K  +   +   Y ++  L     ++DL  +SG + +A  + + M
Sbjct: 370 THLLSACSHSGLVEEGKK-YFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSM 428

Query: 304 P 304
           P
Sbjct: 429 P 429


>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
 gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
          Length = 803

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 243/711 (34%), Positives = 368/711 (51%), Gaps = 99/711 (13%)

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFDGL--------------FNDC--FEEALNFFSQMR 234
           NAF   +L+  ++  G +  AR VF  +               N    F +A+  F  M 
Sbjct: 96  NAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMV 155

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALK------------------TCYEMD 276
             G  P+ F    VL +C   +   + +  H   +K                   C + +
Sbjct: 156 GEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAE 215

Query: 277 LYVAV-------------ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDL 323
              AV             A++ LYT  G +  A  +FE M ++ ++ W+ +IA Y Q  L
Sbjct: 216 TARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGL 275

Query: 324 SIDAVELFCRMRQAF-VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSN 382
              A++ F RM  A  + P++FT  SVL ACA +  L +G Q+HS ++R G+     + N
Sbjct: 276 DDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMN 335

Query: 383 ALMDVYAKCGRME---------------------------------NSVELFAESPKRNH 409
           AL+  YAK G +E                                  + E+F     R+ 
Sbjct: 336 ALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDV 395

Query: 410 VTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCL 469
           + W  MIVGY Q G+  +AM +F  M+         T ++VL ACASLA L  G Q+HC 
Sbjct: 396 IAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCR 455

Query: 470 TVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE--VSWNAMISGYSMHGLSA 527
            +++  +  V V+NA+I +YA+ GS+  AR VFD +  W +  V+W +MI   + HGL  
Sbjct: 456 AIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQIC-WRKETVTWTSMIVALAQHGLGE 514

Query: 528 EVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSM 587
           + + +F+ M + G +P+ +T++GV SAC++ G +++G+ Y++ M+  +GI P + HY  M
Sbjct: 515 QAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACM 574

Query: 588 VSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDE 647
           V LL RAG L +A + I+ +P  P  ++W +LL AC +  N ++  L+A+ +L  +P++ 
Sbjct: 575 VDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNS 634

Query: 648 ATHVLLSNIYAM-------ARSW----EKAASKEPGLSWIENQGMVHYFRAGDTSHADMN 696
             +  L+N+Y+        AR W    +KA  KE G SW   Q  VH F A D  H   +
Sbjct: 635 GAYSALANVYSACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKVHVFGADDVLHPQRD 694

Query: 697 II--RGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSS 754
            I  +    W  +K  KAG++PDL++VL DV ++ KE  L  HSEKLA+AF L   P  +
Sbjct: 695 AICKKAAEMWEEIK--KAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKT 752

Query: 755 PIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            +RI+KNLR+C DCHTAIK ISK+V REII+RD  RFHHF+DG CSC D+W
Sbjct: 753 TLRIMKNLRVCNDCHTAIKFISKVVDREIIVRDATRFHHFRDGYCSCKDYW 803



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 136/490 (27%), Positives = 210/490 (42%), Gaps = 83/490 (16%)

Query: 92  FATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHRE 151
           F  N LL++Y K  RL DA  +F +MPER+ +S+   + G   + +F +AV  F  +  E
Sbjct: 98  FTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGE 157

Query: 152 GHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFA 211
           G   + F  T  L    +     +   V + V KLG  S   V  +++  +  CG  E A
Sbjct: 158 GLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETA 217

Query: 212 RKVFD---------------------------GLFNDCFEE------------------- 225
           R VF+                            +F +  E                    
Sbjct: 218 RAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDD 277

Query: 226 -ALNFFSQM-RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
            AL FFS+M  A   +P+ FT   VL AC  L  +++ K  H   L+T       +  AL
Sbjct: 278 MALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNAL 337

Query: 284 LDLYTKSGEISNARRI---------------------------------FEEMPKKDVIP 310
           +  Y KSG +  ARRI                                 F+ M  +DVI 
Sbjct: 338 ISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIA 397

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV 370
           W+ MI  Y Q   + +A+ELF  M ++   PN  T  +VL ACA++  L  G QIH   +
Sbjct: 398 WTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAI 457

Query: 371 RVGLLSDVFVSNALMDVYAKCGRMENSVELFAE-SPKRNHVTWNTMIVGYVQLGEVGKAM 429
           R      V VSNA++ VYA+ G +  +  +F +   ++  VTW +MIV   Q G   +A+
Sbjct: 458 RSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAI 517

Query: 430 IMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA-LIDM 488
           ++F +ML   V    VTY  V  AC     ++ G + +   +  +  +  +   A ++D+
Sbjct: 518 VLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDL 577

Query: 489 YAKCGSITDA 498
            A+ G +T+A
Sbjct: 578 LARAGLLTEA 587



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 86/329 (26%), Positives = 144/329 (43%), Gaps = 70/329 (21%)

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLL------------------------------ 375
           F  +LQ   T      G  IH+  V+ GLL                              
Sbjct: 28  FARLLQLSQTAVNPSAGRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLF 87

Query: 376 -------SDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKA 428
                   + F  N+L+ +YAK GR+ ++  +FA+ P+R+ V+W  M+VG  + G    A
Sbjct: 88  DDIPYARRNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDA 147

Query: 429 MIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDM 488
           +  F  M+ E +  ++   ++VL +CA+  A   G +VH   +K      V VAN+++ M
Sbjct: 148 VKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYM 207

Query: 489 YAKCGSITDARLVFDMM-----NDWNE--------------------------VSWNAMI 517
           Y KCG    AR VF+ M     + WN                           VSWNA+I
Sbjct: 208 YGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAII 267

Query: 518 SGYSMHGLSAEVLKVFD-LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           +GY+ +GL    LK F  ++      P+  T   VLSAC+N  +L+ G+    S +   G
Sbjct: 268 AGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQ-MHSYILRTG 326

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
           +    +   +++S   ++G ++ A ++++
Sbjct: 327 MPYSSQIMNALISTYAKSGSVETARRIMD 355



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 85/375 (22%), Positives = 162/375 (43%), Gaps = 53/375 (14%)

Query: 95  NVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFST-LHREGH 153
           N ++++Y    R+  A  +F+ M ER+ +S+   I GY  +     A+  FS  L     
Sbjct: 233 NAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSM 292

Query: 154 ELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARK 213
           E + F  T+ L    ++   ++   + + + + G   ++ +  ALI  ++  G VE AR+
Sbjct: 293 EPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARR 352

Query: 214 VFDGLF-------------------------------------------------NDCFE 224
           + D                                                    N   +
Sbjct: 353 IMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQND 412

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           EA+  F  M   G +PN+ T A VL AC  L  +   K  H  A+++  E  + V+ A++
Sbjct: 413 EAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAII 472

Query: 285 DLYTKSGEISNARRIFEEMP-KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
            +Y +SG +  ARR+F+++  +K+ + W+ MI   AQ  L   A+ LF  M +  V P++
Sbjct: 473 TVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDR 532

Query: 344 FTFVSVLQACATMEGLDLGNQIH-SLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
            T++ V  AC     +D G + +  ++   G++ ++     ++D+ A+ G +  + E   
Sbjct: 533 VTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQ 592

Query: 403 ESP-KRNHVTWNTMI 416
             P   + V W +++
Sbjct: 593 RMPVAPDTVVWGSLL 607



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 80/335 (23%), Positives = 136/335 (40%), Gaps = 61/335 (18%)

Query: 89  LDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTL 148
           L++ +   LL  YVKL     A ++FD M  R+ I++   I GY  + Q  EA+ LF ++
Sbjct: 362 LNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSM 421

Query: 149 HREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCV 208
            R G E N     A L    S+ +      +     +   + +  V  A+I  ++  G V
Sbjct: 422 IRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSV 481

Query: 209 EFARKVFDGLF-----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKA 251
             AR+VFD +                  +   E+A+  F +M  VG KP+  T+  V  A
Sbjct: 482 PLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSA 541

Query: 252 CLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM-PKKDVIP 310
           C                                   T +G I   +R +E+M  +  ++P
Sbjct: 542 C-----------------------------------THAGFIDKGKRYYEQMLNEHGIVP 566

Query: 311 ----WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIH 366
               ++ M+   A+  L  +A E   RM    VAP+   + S+L AC   +  DL     
Sbjct: 567 EMSHYACMVDLLARAGLLTEAHEFIQRMP---VAPDTVVWGSLLAACRVRKNADLAELAA 623

Query: 367 SLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
             ++ +    +    +AL +VY+ CGR  ++  ++
Sbjct: 624 EKLLSID-PDNSGAYSALANVYSACGRWNDAARIW 657



 Score = 42.7 bits (99), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 1/104 (0%)

Query: 50  SVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD 109
           S  E NSH+ A  L +C     L     IHC+ ++      +  +N ++ VY +   +P 
Sbjct: 424 SGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPL 483

Query: 110 ATKLFDEMPERN-TISFVTTIQGYTVSSQFVEAVGLFSTLHREG 152
           A ++FD++  R  T+++ + I          +A+ LF  + R G
Sbjct: 484 ARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVG 527


>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
          Length = 847

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 225/587 (38%), Positives = 341/587 (58%), Gaps = 16/587 (2%)

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           MR  G  P  F  +   +A   L     A+S    A    ++ +L+VA  L D+Y+K G 
Sbjct: 263 MRRAGVAPTRFALSSAARAAAALGAPLRARSCTASA-SVGFDTELFVASNLADMYSKCGL 321

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR--MRQAFVAPNQFTFVSVL 350
           +S A R+F++MP+KD + W+ MI  YA+   S++A  L  R   R+  V  +Q  F SVL
Sbjct: 322 LSEACRVFDQMPQKDAVAWTAMIDGYAKNG-SLEAAVLSFRDMKREGLVGADQHVFCSVL 380

Query: 351 QACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKR-NH 409
            A   ++   L   IH  V + G   +V V NAL+D+YAK   +E++  +    P   N 
Sbjct: 381 SASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNV 440

Query: 410 VTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCL 469
           V+  +MI GY++   V +A++++ ++  + V   E T+SS+++ CA  A LE G Q+H  
Sbjct: 441 VSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQ 500

Query: 470 TVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEV 529
            +K +   D  V + L+DMY KCG I+ +  +F+ +    +++WNA+I+ ++ HG   E 
Sbjct: 501 VIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREA 560

Query: 530 LKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVS 589
           ++ FD M   G RPN++ FV +L+ACS+ GL+++G  YF SM   +GIEP  EHY+ ++ 
Sbjct: 561 IQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIID 620

Query: 590 LLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEAT 649
             GRAG LD+A K I  +P +P+   W +LLGAC +  + E+G ++AQ+++  EP +   
Sbjct: 621 TYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGI 680

Query: 650 HVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNII 698
           HV LS IYA    WE   +           K PG SW+++    H F + D SH     I
Sbjct: 681 HVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDI 740

Query: 699 RGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRI 758
              LE L  + ++ GYIPD S +  ++ +  KER L  HSE++A+AFAL  MP + PI +
Sbjct: 741 YEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRYHSERIAVAFALISMPATKPIIV 800

Query: 759 IKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            KNLRIC+DCHTA K I K+ +R+II+RD  RFHHF +G CSCGD+W
Sbjct: 801 KKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVNGRCSCGDYW 847



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 135/487 (27%), Positives = 239/487 (49%), Gaps = 24/487 (4%)

Query: 60  ATSLQSCIQNDDLQTAMTIHCQ-VLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           A+ LQSC +  DL+    +H + VL        F  N L+ +Y     L  A +LF  MP
Sbjct: 174 ASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMP 233

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
            RN +S+ T + G + +    +A+  F+ + R G     FA ++  +   ++G       
Sbjct: 234 RRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRARS 293

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDC 222
             A    +G D+  FV + L D +S CG +  A +VFD +                 N  
Sbjct: 294 CTASA-SVGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGS 352

Query: 223 FEEALNFFSQMRAVGF-KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
            E A+  F  M+  G    +   F  VL A  GL    ++KS H C  K  +E+++ V  
Sbjct: 353 LEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRN 412

Query: 282 ALLDLYTKSGEISNARRIFEEMPKK-DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
           AL+D+Y KS ++ +A R+ +  P   +V+  + MI  Y +TD   +A+ ++  +R+  V 
Sbjct: 413 ALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVE 472

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           PN+FTF S+++ CA    L+ G Q+H+ V++  L+ D FV + L+D+Y KCG +  S++L
Sbjct: 473 PNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQL 532

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F E   R  + WN +I  + Q G   +A+  F +M+   +    + + S+L AC+    +
Sbjct: 533 FNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLV 592

Query: 461 EPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMI 517
           + G++ +  ++K  + ++    +   +ID Y + G + +A + + +M    N   W +++
Sbjct: 593 DEGLK-YFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLL 651

Query: 518 SGYSMHG 524
               M G
Sbjct: 652 GACRMRG 658



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 102/451 (22%), Positives = 193/451 (42%), Gaps = 86/451 (19%)

Query: 245 FAFVLKACLGLDTIRVAKSAHG-CALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
            A +L++C     +R  +  H    L        ++A  L+ +Y+   ++++A R+F  M
Sbjct: 23  LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAM 82

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF----------------- 346
           P+++ + W+ +++  +Q  +  DA+  F  MR+A VAP +  +                 
Sbjct: 83  PRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAAS 142

Query: 347 -------------------------------VSVLQACATMEGLDLGNQIHS-LVVRVGL 374
                                           S+LQ+C     L  G  +H+ LV+    
Sbjct: 143 HCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAA 202

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQ------------- 421
            +  F++N L+ +Y+ C  + +++ LFA  P+RN V+W T++ G  Q             
Sbjct: 203 AASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAA 262

Query: 422 LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVV 481
           +   G A   F+     +  A  +      R+C + A++              +D ++ V
Sbjct: 263 MRRAGVAPTRFALSSAARA-AAALGAPLRARSCTASASV-------------GFDTELFV 308

Query: 482 ANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG-LSAEVLKVFDLMQQRG 540
           A+ L DMY+KCG +++A  VFD M   + V+W AMI GY+ +G L A VL   D+ ++  
Sbjct: 309 ASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGL 368

Query: 541 WRPNNLTFVGVLSACSNGGLLEQG-EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDK 599
              +   F  VLSA  +GGL +          V   G E  +    +++ +  ++  ++ 
Sbjct: 369 VGADQHVFCSVLSA--SGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVES 426

Query: 600 AAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
           A+++++  P       W  + G  +I   +E
Sbjct: 427 ASRVLKIDPGG-----WNVVSGTSMIDGYIE 452



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 124/287 (43%), Gaps = 31/287 (10%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           + H + + L +     D   + +IHC V K G  L++   N L+++Y K   +  A+++ 
Sbjct: 372 DQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVL 431

Query: 115 DEMPER-NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
              P   N +S  + I GY  +    EA+ ++  L R+G E N F F++ +K        
Sbjct: 432 KIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALL 491

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF-------DGLFNDCF--- 223
           E    + A V K     ++FVG+ L+D +  CG +  + ++F       D  +N      
Sbjct: 492 EQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVF 551

Query: 224 ------EEALNFFSQMRAVGFKPNNFTFAFVLKACL-------GLDTIRVAKSAHGCALK 270
                  EA+  F +M   G +PN+  F  +L AC        GL      K AHG   K
Sbjct: 552 AQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPK 611

Query: 271 TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
                + Y  +  +D Y ++G +  A +   EMP K +   W  ++ 
Sbjct: 612 E----EHYSCI--IDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLG 652



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 1/108 (0%)

Query: 442 ATEVTYSSVLRACASLAALEPGMQVHC-LTVKANYDMDVVVANALIDMYAKCGSITDARL 500
           AT V  +S+L++C     L  G  +H  L +         +AN LI MY+ C  +  A  
Sbjct: 18  ATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALR 77

Query: 501 VFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTF 548
           +F  M   N VSW  ++SG S + + A+ L  F  M++ G  P  L +
Sbjct: 78  LFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIY 125



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 44/201 (21%), Positives = 81/201 (40%), Gaps = 19/201 (9%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N  ++++ ++ C     L+    +H QV+K     D F  + L+++Y K   +  + +
Sbjct: 472 EPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQ 531

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           LF+E+  R  I++   I  +       EA+  F  +   G   N  AF + L      G 
Sbjct: 532 LFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGL 591

Query: 173 AELCPCVFACVYKL-GHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFS 231
            +     F  + +  G +      + +ID +   G +               +EA  F S
Sbjct: 592 VDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRL---------------DEAYKFIS 636

Query: 232 QMRAVGFKPNNFTFAFVLKAC 252
           +M     KPN + +  +L AC
Sbjct: 637 EM---PIKPNAYGWCSLLGAC 654



 Score = 45.8 bits (107), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 1/75 (1%)

Query: 60  ATSLQSCIQNDDLQTAMTIHCQ-VLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           A+ LQSC +  DL+    +H + VL        F  N L+ +Y     L  A +LF  MP
Sbjct: 24  ASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMP 83

Query: 119 ERNTISFVTTIQGYT 133
            RN +S+ T + G +
Sbjct: 84  RRNAVSWTTLVSGLS 98


>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Vitis vinifera]
          Length = 694

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 209/574 (36%), Positives = 335/574 (58%), Gaps = 15/574 (2%)

Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
           +  F + +C    ++    + H   +K+    D ++   L+ +Y K G   +A+R+F+EM
Sbjct: 124 SLVFAISSCT---SVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEM 180

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMR-QAFVAPNQFTFVSVLQACATMEGLDLG 362
           P KD++ W+ +++  +        +  FCRMR ++   PN+ T +SV+ ACA M  LD G
Sbjct: 181 PNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEG 240

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
             +H +VV++G+     V N+L+++Y K G ++ + +LF E P R+ V+WN+M+V +   
Sbjct: 241 KSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHN 300

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
           G   K M +F+ M    +   + T  ++LRAC           +H    +  ++ D+++A
Sbjct: 301 GYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIA 360

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
            AL+++YAK G +  +  +F+ + D + ++W AM++GY++H    E +K+FDLM + G  
Sbjct: 361 TALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVE 420

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
            +++TF  +LSACS+ GL+E+G+ YF+ M   Y +EP ++HY+ MV LLGR+G L+ A +
Sbjct: 421 VDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYE 480

Query: 603 LIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARS 662
           LI+ +P +PS  +W ALLGAC ++ NVE+G+  A+ +L  +P D   +++LSNIY+ A  
Sbjct: 481 LIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGL 540

Query: 663 W-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRK 711
           W           E+  ++ PG S+IE+   +H F  GD  H   + I   LE L  K R+
Sbjct: 541 WRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIRE 600

Query: 712 AGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTA 771
           AG  P    VL D+ E+ K   +  HSEKLA+AF L       P+ I KNLRIC DCH+ 
Sbjct: 601 AGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHST 660

Query: 772 IKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            K  S + +R IIIRD  RFHHF DG CSC D+W
Sbjct: 661 AKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 694



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 188/409 (45%), Gaps = 43/409 (10%)

Query: 42  STTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVY 101
           S    + F++S   S SY ++               IH +V+K  N  D F  + L+++Y
Sbjct: 120 SIVQSLVFAISSCTSVSYCSA---------------IHARVIKSLNYSDGFIGDRLVSMY 164

Query: 102 VKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHRE-GHELNPFAF 160
            KL    DA +LFDEMP ++ +S+ + + G +        +  F  +  E G + N    
Sbjct: 165 FKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTL 224

Query: 161 TAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-- 218
            + +     MG  +    +   V KLG    A V  +LI+ +   G ++ A ++F+ +  
Sbjct: 225 LSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPV 284

Query: 219 --------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSA 264
                          N   E+ ++ F+ M+  G  P+  T   +L+AC      R A+S 
Sbjct: 285 RSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESI 344

Query: 265 HGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLS 324
           H    +  +  D+ +A ALL+LY K G ++ +  IFEE+  +D I W+ M+A YA     
Sbjct: 345 HAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACG 404

Query: 325 IDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN---QIHSLVVRVGLLSDVFVS 381
            +A++LF  M +  V  +  TF  +L AC+    ++ G    +I S V RV    D +  
Sbjct: 405 REAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHY-- 462

Query: 382 NALMDVYAKCGRMENSVELFAESP-KRNHVTWNTM-----IVGYVQLGE 424
           + ++D+  + GR+E++ EL    P + +   W  +     + G V+LG+
Sbjct: 463 SCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGK 511



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/301 (21%), Positives = 130/301 (43%), Gaps = 21/301 (6%)

Query: 22  NAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQ 81
           N+ + GLS +  L    C N+     T S  + N  +  + + +C     L    ++H  
Sbjct: 189 NSLMSGLSGRGYLGA--CLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGV 246

Query: 82  VLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEA 141
           V+K G        N L+N+Y KL  L  A++LF+EMP R+ +S+ + +  +  +    + 
Sbjct: 247 VVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKG 306

Query: 142 VGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDA 201
           + LF+ + R G   +     A L+     G       + A +++ G +++  + TAL++ 
Sbjct: 307 MDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNL 366

Query: 202 FSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTF 245
           ++  G +  +  +F+ +                 + C  EA+  F  M   G + ++ TF
Sbjct: 367 YAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTF 426

Query: 246 AFVLKACLGLDTIRVAKSAHGCALKTCYEMD--LYVAVALLDLYTKSGEISNARRIFEEM 303
             +L AC     +   K      +   Y ++  L     ++DL  +SG + +A  + + M
Sbjct: 427 THLLSACSHSGLVEEGKKYFEI-MSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSM 485

Query: 304 P 304
           P
Sbjct: 486 P 486


>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g14050, mitochondrial-like [Cucumis sativus]
          Length = 611

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 220/606 (36%), Positives = 344/606 (56%), Gaps = 45/606 (7%)

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
           F   L+ C    +   A   H   +K  ++    ++  LLD+Y K G I  A ++F+EMP
Sbjct: 6   FLHQLQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMP 65

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQACATMEGLDLGN 363
            +D + W+ ++  + +  +    + +   M     + P+ F F  +++AC+++  L LG 
Sbjct: 66  NRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGK 125

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGR------------MENSV------------- 398
           Q+H+  +      D  V ++L+D+Y KCG+             +NSV             
Sbjct: 126 QVHARFMLSXFCDDEVVKSSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISGYARSG 185

Query: 399 ------ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATE-VTYSSVL 451
                 +LF ++P RN  +W  +I G +Q G    +  +F++M  E +   + +  SSV+
Sbjct: 186 RKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVV 245

Query: 452 RACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEV 511
             CA+LA LE G Q+H L +   ++  + ++NAL+DMYAKC  I  A+ +F  M   + +
Sbjct: 246 GGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVI 305

Query: 512 SWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSM 571
           SW ++I G + HG + E L ++D M     +PN +TFVG+L ACS+ GL+ +G   F+SM
Sbjct: 306 SWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSM 365

Query: 572 VANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEI 631
             +Y I P ++HYT ++ LL R+GHLD+A  L++ IPF+P    W +LL AC+ HNN+E+
Sbjct: 366 TTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEM 425

Query: 632 GRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQG 680
           G   A  +LD +PED +T++LLSN+YA A  W   +            KEPG S I+   
Sbjct: 426 GVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFGK 485

Query: 681 MVHYFRAGDT-SHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSE 739
               F AG++  H   N I  +L+ L+ + RK GY+P+ S VL D+ + EKE+ L+ HSE
Sbjct: 486 DSQVFHAGESCDHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLFWHSE 545

Query: 740 KLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCC 799
           +LA+A+ L K  P + IRI+KNLRIC DCH  +K IS IV+REI++RD  R+HHF++G C
Sbjct: 546 RLAVAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIMVRDATRYHHFKEGKC 605

Query: 800 SCGDFW 805
           SC DFW
Sbjct: 606 SCNDFW 611



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/392 (24%), Positives = 192/392 (48%), Gaps = 51/392 (13%)

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN-DCFEEALNFFSQMRAV----- 236
           + K G D ++ +   L+D +  CG +  A ++FD + N D    A    +  +A+     
Sbjct: 29  IIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKALIPRRT 88

Query: 237 -----------GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
                      G +P++F FA +++AC  L  +R+ K  H   + + +  D  V  +L+D
Sbjct: 89  LSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSXFCDDEVVKSSLID 148

Query: 286 LYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM----------- 334
           +YTK G+   AR +F+ +  K+ + W+ MI+ YA++    +A++LF +            
Sbjct: 149 MYTKCGQPDEARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTAL 208

Query: 335 ---------------------RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
                                R+     +     SV+  CA +  L+LG QIH LV+ +G
Sbjct: 209 ISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALG 268

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
             S +F+SNAL+D+YAKC  +  + ++F   P+++ ++W ++IVG  Q G+  +A+ ++ 
Sbjct: 269 FESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYD 328

Query: 434 KMLEEQVPATEVTYSSVLRACASLAALEPGMQV-HCLTVKANYDMDVVVANALIDMYAKC 492
           +M+  ++   EVT+  +L AC+    +  G ++   +T   + +  +     L+D+ ++ 
Sbjct: 329 EMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRS 388

Query: 493 GSITDARLVFDMMN-DWNEVSWNAMISGYSMH 523
           G + +A  + D +    +E +W +++S    H
Sbjct: 389 GHLDEAENLLDKIPFKPDEPTWASLLSACMRH 420



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 105/449 (23%), Positives = 199/449 (44%), Gaps = 53/449 (11%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N   +   LQ C +      A  +H Q++K G       +N LL+VY K   +P A +LF
Sbjct: 2   NISHFLHQLQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLF 61

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH-REGHELNPFAFTAFLKVLVSMGWA 173
           DEMP R+ +S+ + +  +  +      + + +T+   +G + + F F   ++   S+G+ 
Sbjct: 62  DEMPNRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYL 121

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF-------------- 219
            L   V A         +  V ++LID ++ CG  + AR VFD +               
Sbjct: 122 RLGKQVHARFMLSXFCDDEVVKSSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISGY 181

Query: 220 ---------NDCFEEA------------------------LNFFSQMRAVGFK-PNNFTF 245
                     D F +A                         + F++MR  G    +    
Sbjct: 182 ARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVL 241

Query: 246 AFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPK 305
           + V+  C  L  + + K  HG  +   +E  L+++ AL+D+Y K  +I  A+ IF  MP+
Sbjct: 242 SSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPR 301

Query: 306 KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
           KDVI W+ +I   AQ   + +A+ L+  M  + + PN+ TFV +L AC+    +  G ++
Sbjct: 302 KDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGREL 361

Query: 366 -HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMIVGYVQLG 423
             S+     +   +     L+D+ ++ G ++ +  L  + P K +  TW +++   ++  
Sbjct: 362 FRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHN 421

Query: 424 EVGKAMIMFSKMLE--EQVPATEVTYSSV 450
            +   + +  ++L+   + P+T +  S+V
Sbjct: 422 NLEMGVRIADRVLDLKPEDPSTYILLSNV 450



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 91/399 (22%), Positives = 166/399 (41%), Gaps = 43/399 (10%)

Query: 97  LLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHEL- 155
           +++ Y +  R  +A  LF + P RN  S+   I G   S   + +  LF+ + REG ++ 
Sbjct: 177 MISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIV 236

Query: 156 NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF 215
           +P   ++ +    ++   EL   +   V  LG +S  F+  AL+D ++ C  +  A+ +F
Sbjct: 237 DPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIF 296

Query: 216 DGL-FNDCF---------------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIR 259
             +   D                 EEAL  + +M     KPN  TF  +L AC     + 
Sbjct: 297 YRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVS 356

Query: 260 VAKSAHGCALKTCYEMD--LYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
             +     ++ T Y ++  L     LLDL ++SG +  A  + +++P K D   W+ +++
Sbjct: 357 RGRELFR-SMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLS 415

Query: 317 ---RYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG--LDLGNQIHSLVVR 371
              R+   ++ +   +    ++     P+ +  +S + A A M G    +   + S+ VR
Sbjct: 416 ACMRHNNLEMGVRIADRVLDLKPE--DPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVR 473

Query: 372 ---------VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
                     G  S VF +    D   K        +L AE  KR +V   + ++  ++ 
Sbjct: 474 KEPGYSSIDFGKDSQVFHAGESCDHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQ 533

Query: 423 GEVGKAMIMFSKMLE------EQVPATEVTYSSVLRACA 455
            E  K +   S+ L       + VP T +     LR C 
Sbjct: 534 QEKEKQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRICG 572



 Score = 45.8 bits (107), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 52/238 (21%), Positives = 93/238 (39%), Gaps = 27/238 (11%)

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
           L+    IH  V+  G    LF +N L+++Y K + +  A  +F  MP ++ IS+ + I G
Sbjct: 254 LELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVG 313

Query: 132 YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACV---YKLGH 188
                +  EA+ L+  +     + N   F   L      G       +F  +   Y +  
Sbjct: 314 TAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINP 373

Query: 189 DSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFV 248
               +  T L+D  S  G ++ A  + D                   + FKP+  T+A +
Sbjct: 374 SLQHY--TCLLDLLSRSGHLDEAENLLD------------------KIPFKPDEPTWASL 413

Query: 249 LKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKS---GEISNARRIFEEM 303
           L AC+  + + +        L    E D    + L ++Y  +   G +S  R++   M
Sbjct: 414 LSACMRHNNLEMGVRIADRVLDLKPE-DPSTYILLSNVYAGAEMWGSVSKVRKLMSSM 470


>gi|3402709|gb|AAD12003.1| hypothetical protein [Arabidopsis thaliana]
          Length = 563

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 209/535 (39%), Positives = 317/535 (59%), Gaps = 12/535 (2%)

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L++ Y ++G++ NAR++F+EMP + +  W+ MIA   Q + + + + LF  M     +P+
Sbjct: 29  LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPD 88

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           ++T  SV    A +  + +G QIH   ++ GL  D+ V+++L  +Y + G++++   +  
Sbjct: 89  EYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIR 148

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
             P RN V WNT+I+G  Q G     + ++  M        ++T+ +VL +C+ LA    
Sbjct: 149 SMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQ 208

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G Q+H   +K      V V ++LI MY+KCG + DA   F    D +EV W++MIS Y  
Sbjct: 209 GQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGF 268

Query: 523 HGLSAEVLKVFDLM-QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
           HG   E +++F+ M +Q     N + F+ +L ACS+ GL ++G   F  MV  YG +P +
Sbjct: 269 HGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGL 328

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
           +HYT +V LLGRAG LD+A  +I  +P +  ++IW+ LL AC IH N E+ +   + IL 
Sbjct: 329 KHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ 388

Query: 642 FEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDT 690
            +P D A +VLL+N++A A+ W           +K   KE G+SW E++G VH F+ GD 
Sbjct: 389 IDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDR 448

Query: 691 SHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKM 750
           S +    I   L+ L ++ +  GY PD ++VL D+ E+EKE  L  HSEKLA+AFAL  +
Sbjct: 449 SQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMIL 508

Query: 751 PPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           P  +PIRIIKNLR+C DCH A K IS I  REI +RD  RFHHF +G CSCGD+W
Sbjct: 509 PEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 563



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 183/375 (48%), Gaps = 19/375 (5%)

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GLFNDCF-EEA 226
           VY      N      LI+ +   G +  ARKVFD               GL    F EE 
Sbjct: 14  VYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEG 73

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           L+ F +M  +GF P+ +T   V     GL ++ + +  HG  +K   E+DL V  +L  +
Sbjct: 74  LSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHM 133

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y ++G++ +   +   MP ++++ W+ +I   AQ       + L+  M+ +   PN+ TF
Sbjct: 134 YMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITF 193

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
           V+VL +C+ +     G QIH+  +++G  S V V ++L+ +Y+KCG + ++ + F+E   
Sbjct: 194 VTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERED 253

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE-QVPATEVTYSSVLRACASLAALEPGMQ 465
            + V W++MI  Y   G+  +A+ +F+ M E+  +   EV + ++L AC+     + G++
Sbjct: 254 EDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLE 313

Query: 466 VHCLTV-KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE-VSWNAMISGYSMH 523
           +  + V K  +   +     ++D+  + G +  A  +   M    + V W  ++S  ++H
Sbjct: 314 LFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIH 373

Query: 524 GLSAEVLKVFDLMQQ 538
             +    +VF  + Q
Sbjct: 374 KNAEMAQRVFKEILQ 388



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 125/246 (50%), Gaps = 2/246 (0%)

Query: 381 SNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQV 440
           SN L++ Y + G + N+ ++F E P R   TWN MI G +Q     + + +F +M     
Sbjct: 26  SNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGF 85

Query: 441 PATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARL 500
              E T  SV    A L ++  G Q+H  T+K   ++D+VV ++L  MY + G + D  +
Sbjct: 86  SPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEI 145

Query: 501 VFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGL 560
           V   M   N V+WN +I G + +G    VL ++ +M+  G RPN +TFV VLS+CS+  +
Sbjct: 146 VIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAI 205

Query: 561 LEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
             QG+      +   G    +   +S++S+  + G L  AAK       +  VM W +++
Sbjct: 206 RGQGQQIHAEAI-KIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVM-WSSMI 263

Query: 621 GACIIH 626
            A   H
Sbjct: 264 SAYGFH 269



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 85/365 (23%), Positives = 159/365 (43%), Gaps = 23/365 (6%)

Query: 71  DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQ 130
           D  +A+ ++ ++ KK    +  ++N+L+N YV+   L +A K+FDEMP+R   ++   I 
Sbjct: 7   DFPSAVAVYGRMRKK----NYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIA 62

Query: 131 GYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDS 190
           G        E + LF  +H  G   + +   +       +    +   +     K G + 
Sbjct: 63  GLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLEL 122

Query: 191 NAFVGTAL----------------IDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMR 234
           +  V ++L                I +  V   V +   +     N C E  L  +  M+
Sbjct: 123 DLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMK 182

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
             G +PN  TF  VL +C  L      +  H  A+K      + V  +L+ +Y+K G + 
Sbjct: 183 ISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLG 242

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQAC 353
           +A + F E   +D + WS MI+ Y       +A+ELF  M  Q  +  N+  F+++L AC
Sbjct: 243 DAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYAC 302

Query: 354 ATMEGLDLGNQIHSLVV-RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVT 411
           +     D G ++  ++V + G    +     ++D+  + G ++ +  +    P K + V 
Sbjct: 303 SHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVI 362

Query: 412 WNTMI 416
           W T++
Sbjct: 363 WKTLL 367



 Score = 42.4 bits (98), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 62/164 (37%), Gaps = 33/164 (20%)

Query: 488 MYAKCG-------------------------------SITDARLVFDMMNDWNEVSWNAM 516
           MY+K G                                + +AR VFD M D    +WNAM
Sbjct: 1   MYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAM 60

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           I+G      + E L +F  M   G+ P+  T   V S  +    +  G+         YG
Sbjct: 61  IAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQ-IHGYTIKYG 119

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
           +E  +   +S+  +  R G L     +I  +P + +++ W  L+
Sbjct: 120 LELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVR-NLVAWNTLI 162


>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 246/660 (37%), Positives = 371/660 (56%), Gaps = 41/660 (6%)

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF---------EEA 226
           V+   HD N F    LI A++    VE A ++FD +       +N            + A
Sbjct: 65  VFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPA 124

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV--ALL 284
              F +MR      + FT + ++ AC G++ + + +  H  AL     +D YV+V  AL+
Sbjct: 125 FQLFLEMREAFLDMDGFTLSGIITAC-GIN-VGLIRQLH--ALSVVTGLDSYVSVGNALI 180

Query: 285 DLYTKSGEISNARRIFEEMPK-KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
             Y+K+G +  ARRIF  + + +D + W+ M+  Y Q      A+EL+  M    +  + 
Sbjct: 181 TSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDI 240

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR-MENSVELFA 402
           FT  SVL A   ++ L  G Q H+ +++ G   +  V + L+D+Y+KCG  M +  ++F 
Sbjct: 241 FTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFD 300

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVG-KAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
           E    + V WNTMI GY    ++  +A+  F ++        + +   V+ AC+++++  
Sbjct: 301 EISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPS 360

Query: 462 PGMQVHCLTVKANYDMD-VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY 520
            G QVH L +K +   + + V NALI MY+KCG++ DA+ +FD M + N VS+N+MI+GY
Sbjct: 361 QGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGY 420

Query: 521 SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPC 580
           + HG+  + L +F  M + G+ P N+TF+ VL+AC++ G +E G+ YF  M   +GIEP 
Sbjct: 421 AQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPE 480

Query: 581 IEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHIL 640
             H++ M+ LLGRAG L +A +LIE IPF P    W ALLGAC IH NVE+   +A  +L
Sbjct: 481 AGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLL 540

Query: 641 DFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGD 689
             +P + A +V+L+NIY+     + AAS           K+PG SWIE    +H F A D
Sbjct: 541 QLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAED 600

Query: 690 TSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVL----RDVREDEKERYLWVHSEKLALAF 745
           T H  +  I+  LE +  K +K GY P++ + L      V + E+E  L  HSEKLA++F
Sbjct: 601 TFHPMIKKIQEYLEEMMRKIKKVGYTPEVRSALVGGDDRVWQREEELRLGHHSEKLAVSF 660

Query: 746 ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            L       PI + KNLRICVDCH AIK IS++V+REI +RD HRFH F+DG CSCG +W
Sbjct: 661 GLMSTREGEPILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSCGGYW 720



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 152/578 (26%), Positives = 279/578 (48%), Gaps = 63/578 (10%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKK----------------GNCLDL--------- 91
           H++   L++CI + DL+T  ++H   +K                   C  L         
Sbjct: 9   HNFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDH 68

Query: 92  ------FATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLF 145
                 F+ N L++ Y K + +  A +LFDEMP+ +++S+ T I  Y        A  LF
Sbjct: 69  THDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLF 128

Query: 146 STLHREGHELNPFAFTAFLKVL-VSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSV 204
             +     +++ F  +  +    +++G   L   + A     G DS   VG ALI ++S 
Sbjct: 129 LEMREAFLDMDGFTLSGIITACGINVG---LIRQLHALSVVTGLDSYVSVGNALITSYSK 185

Query: 205 CGCVEFARKVFDGLFNDCFE-----------------EALNFFSQMRAVGFKPNNFTFAF 247
            G ++ AR++F  L  D  E                 +AL  + +M   G   + FT A 
Sbjct: 186 NGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLAS 245

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE-ISNARRIFEEMPKK 306
           VL A   +  +      H   +K+ Y  + +V   L+DLY+K G  + + R++F+E+   
Sbjct: 246 VLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNP 305

Query: 307 DVIPWSFMIARYA-QTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
           D++ W+ MI+ Y+   DLS +A+E F +++     P+  + V V+ AC+ M     G Q+
Sbjct: 306 DLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQV 365

Query: 366 HSLVVRVGLLSD-VFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
           H L +++ + S+ + V+NAL+ +Y+KCG + ++  LF   P+ N V++N+MI GY Q G 
Sbjct: 366 HGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGM 425

Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN- 483
             +++ +F +MLE     T +T+ SVL ACA    +E G +++   +K  + ++    + 
Sbjct: 426 GFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDG-KIYFNMMKQKFGIEPEAGHF 484

Query: 484 -ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW 541
             +ID+  + G +++A RL+  +  D     W+A++    +HG     +K  + + Q   
Sbjct: 485 SCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQ--L 542

Query: 542 RP-NNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
            P N   +V + +  S+ G L Q  A  + ++ + G++
Sbjct: 543 DPLNAAPYVMLANIYSDNGRL-QDAASVRKLMRDRGVK 579


>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
 gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
          Length = 784

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 244/732 (33%), Positives = 380/732 (51%), Gaps = 42/732 (5%)

Query: 101 YVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAF 160
           +V+   + +A  +F++M   +T  +   I+GYT +  F EA+  +  +  EG   + F F
Sbjct: 68  FVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTF 127

Query: 161 TAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-- 218
              +K    +    +   V   + K+G D + +V   LID +   G +E A KVFD +  
Sbjct: 128 PFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPV 187

Query: 219 -----FNDCFE---------EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSA 264
                +N              +L  F +M  +G K + F     L AC     +R     
Sbjct: 188 RDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEI 247

Query: 265 HGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLS 324
           H   +++  E+D+ V  +L+D+Y K G++  A R+F  +  K+++ W+ MI    + D  
Sbjct: 248 HCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQEDDK- 306

Query: 325 IDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNAL 384
                         V P+  T +++L +C+    L  G  IH   +R   L  + +  AL
Sbjct: 307 --------------VIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETAL 352

Query: 385 MDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATE 444
           +D+Y KCG ++ +  +F +  ++N V+WNTM+  YVQ  +  +A+ MF  +L E +    
Sbjct: 353 VDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDA 412

Query: 445 VTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDM 504
           +T +SVL A A LA+   G Q+H   +K     +  ++NA++ MYAKCG +  AR  FD 
Sbjct: 413 ITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDG 472

Query: 505 MNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG 564
           M   + VSWN MI  Y++HG     ++ F  M+ +G++PN  TFV +L+ACS  GL+++G
Sbjct: 473 MVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEG 532

Query: 565 EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACI 624
             +F SM   YGI+P IEHY  M+ LLGR G+LD+A   IE +P  P+  IW +LL A  
Sbjct: 533 WGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLAASR 592

Query: 625 IHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE-----KAASKEPGL------ 673
            HN+V +  L+A+HIL  + ++   +VLLSN+YA A  WE     K   KE GL      
Sbjct: 593 NHNDVVLAELAARHILSLKHDNTGCYVLLSNMYAEAGRWEDVDRIKYLMKEQGLVKTVGC 652

Query: 674 SWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERY 733
           S ++  G    F   D SHA  N+I  +L+ L  K  +  Y+  L+         ++   
Sbjct: 653 SMVDINGRSESFINQDRSHAHTNLIYDVLDILLKKIGEDIYLHSLTKFRPLDVAKKRGNS 712

Query: 734 LWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHH 793
              HS KLA+ F L      +P+ + KN RIC DCH A K IS++ +REI++ D   FHH
Sbjct: 713 PEYHSVKLAICFGLISTAIGNPVIVRKNTRICDDCHRAAKKISQVTKREIVVGDAKVFHH 772

Query: 794 FQDGCCSCGDFW 805
           F+DGCCSC D+W
Sbjct: 773 FRDGCCSCRDYW 784



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 118/459 (25%), Positives = 237/459 (51%), Gaps = 14/459 (3%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           ++ ++   +++C +   L     +H +++K G  LD++  N L+++Y+K+  +  A K+F
Sbjct: 123 DNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVF 182

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           DEMP R+ +S+ + + GY +    + ++  F  + R G++ + F       ++ ++G   
Sbjct: 183 DEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFG------MISALGACS 236

Query: 175 LCPC------VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALN 228
           +  C      +   V +   + +  V T+LID +  CG V++A +VF+ +++        
Sbjct: 237 IEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNA 296

Query: 229 FFSQMRAVG-FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLY 287
               M+      P+  T   +L +C     +   KS HG A++  +   L +  AL+D+Y
Sbjct: 297 MIGGMQEDDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMY 356

Query: 288 TKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFV 347
            K GE+  A  +F +M +K+++ W+ M+A Y Q +   +A+++F  +    + P+  T  
Sbjct: 357 GKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIA 416

Query: 348 SVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKR 407
           SVL A A +     G QIHS ++++GL S+ F+SNA++ +YAKCG ++ + E F     +
Sbjct: 417 SVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCK 476

Query: 408 NHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ-V 466
           + V+WNTMI+ Y   G    ++  FS+M  +       T+ S+L AC+    ++ G    
Sbjct: 477 DVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFF 536

Query: 467 HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMM 505
           + + V+   D  +     ++D+  + G++ +A+   + M
Sbjct: 537 NSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEM 575



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/372 (24%), Positives = 161/372 (43%), Gaps = 52/372 (13%)

Query: 61  TSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPER 120
           ++L +C     L++ M IHCQV++    LD+     L+++Y K  ++  A ++F+ +  +
Sbjct: 230 SALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSK 289

Query: 121 NTISFVTTIQGY----TVSSQFVEAVGLFSTLHR-----EGHELNPFAFTA-FLKVLVSM 170
           N +++   I G      V    +  + L  +  +     EG  ++ FA    FL  LV  
Sbjct: 290 NIVAWNAMIGGMQEDDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLV-- 347

Query: 171 GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------- 219
                                  + TAL+D +  CG ++ A  VF+ +            
Sbjct: 348 -----------------------LETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMV 384

Query: 220 -----NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
                N+ ++EAL  F  +     KP+  T A VL A   L +    K  H   +K    
Sbjct: 385 AAYVQNEQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLG 444

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
            + +++ A++ +Y K G++  AR  F+ M  KDV+ W+ MI  YA       +++ F  M
Sbjct: 445 SNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEM 504

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           R     PN  TFVS+L AC+    +D G    +S+ V  G+   +     ++D+  + G 
Sbjct: 505 RGKGFKPNGSTFVSLLTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGN 564

Query: 394 MENSVELFAESP 405
           ++ +     E P
Sbjct: 565 LDEAKCFIEEMP 576


>gi|30688521|ref|NP_850342.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|18491267|gb|AAL69458.1| At2g41080/T3K9.15 [Arabidopsis thaliana]
 gi|330254831|gb|AEC09925.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 565

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 209/535 (39%), Positives = 317/535 (59%), Gaps = 12/535 (2%)

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L++ Y ++G++ NAR++F+EMP + +  W+ MIA   Q + + + + LF  M     +P+
Sbjct: 31  LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPD 90

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           ++T  SV    A +  + +G QIH   ++ GL  D+ V+++L  +Y + G++++   +  
Sbjct: 91  EYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIR 150

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
             P RN V WNT+I+G  Q G     + ++  M        ++T+ +VL +C+ LA    
Sbjct: 151 SMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQ 210

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G Q+H   +K      V V ++LI MY+KCG + DA   F    D +EV W++MIS Y  
Sbjct: 211 GQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGF 270

Query: 523 HGLSAEVLKVFDLM-QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
           HG   E +++F+ M +Q     N + F+ +L ACS+ GL ++G   F  MV  YG +P +
Sbjct: 271 HGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGL 330

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
           +HYT +V LLGRAG LD+A  +I  +P +  ++IW+ LL AC IH N E+ +   + IL 
Sbjct: 331 KHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ 390

Query: 642 FEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDT 690
            +P D A +VLL+N++A A+ W           +K   KE G+SW E++G VH F+ GD 
Sbjct: 391 IDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDR 450

Query: 691 SHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKM 750
           S +    I   L+ L ++ +  GY PD ++VL D+ E+EKE  L  HSEKLA+AFAL  +
Sbjct: 451 SQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMIL 510

Query: 751 PPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           P  +PIRIIKNLR+C DCH A K IS I  REI +RD  RFHHF +G CSCGD+W
Sbjct: 511 PEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 565



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 183/375 (48%), Gaps = 19/375 (5%)

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GLFNDCF-EEA 226
           VY      N      LI+ +   G +  ARKVFD               GL    F EE 
Sbjct: 16  VYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEG 75

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           L+ F +M  +GF P+ +T   V     GL ++ + +  HG  +K   E+DL V  +L  +
Sbjct: 76  LSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHM 135

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y ++G++ +   +   MP ++++ W+ +I   AQ       + L+  M+ +   PN+ TF
Sbjct: 136 YMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITF 195

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
           V+VL +C+ +     G QIH+  +++G  S V V ++L+ +Y+KCG + ++ + F+E   
Sbjct: 196 VTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERED 255

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE-QVPATEVTYSSVLRACASLAALEPGMQ 465
            + V W++MI  Y   G+  +A+ +F+ M E+  +   EV + ++L AC+     + G++
Sbjct: 256 EDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLE 315

Query: 466 VHCLTV-KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE-VSWNAMISGYSMH 523
           +  + V K  +   +     ++D+  + G +  A  +   M    + V W  ++S  ++H
Sbjct: 316 LFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIH 375

Query: 524 GLSAEVLKVFDLMQQ 538
             +    +VF  + Q
Sbjct: 376 KNAEMAQRVFKEILQ 390



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 125/246 (50%), Gaps = 2/246 (0%)

Query: 381 SNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQV 440
           SN L++ Y + G + N+ ++F E P R   TWN MI G +Q     + + +F +M     
Sbjct: 28  SNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGF 87

Query: 441 PATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARL 500
              E T  SV    A L ++  G Q+H  T+K   ++D+VV ++L  MY + G + D  +
Sbjct: 88  SPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEI 147

Query: 501 VFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGL 560
           V   M   N V+WN +I G + +G    VL ++ +M+  G RPN +TFV VLS+CS+  +
Sbjct: 148 VIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAI 207

Query: 561 LEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
             QG+      +   G    +   +S++S+  + G L  AAK       +  VM W +++
Sbjct: 208 RGQGQQIHAEAI-KIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVM-WSSMI 265

Query: 621 GACIIH 626
            A   H
Sbjct: 266 SAYGFH 271



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 85/365 (23%), Positives = 159/365 (43%), Gaps = 23/365 (6%)

Query: 71  DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQ 130
           D  +A+ ++ ++ KK    +  ++N+L+N YV+   L +A K+FDEMP+R   ++   I 
Sbjct: 9   DFPSAVAVYGRMRKK----NYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIA 64

Query: 131 GYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDS 190
           G        E + LF  +H  G   + +   +       +    +   +     K G + 
Sbjct: 65  GLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLEL 124

Query: 191 NAFVGTAL----------------IDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMR 234
           +  V ++L                I +  V   V +   +     N C E  L  +  M+
Sbjct: 125 DLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMK 184

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
             G +PN  TF  VL +C  L      +  H  A+K      + V  +L+ +Y+K G + 
Sbjct: 185 ISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLG 244

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQAC 353
           +A + F E   +D + WS MI+ Y       +A+ELF  M  Q  +  N+  F+++L AC
Sbjct: 245 DAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYAC 304

Query: 354 ATMEGLDLGNQIHSLVV-RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVT 411
           +     D G ++  ++V + G    +     ++D+  + G ++ +  +    P K + V 
Sbjct: 305 SHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVI 364

Query: 412 WNTMI 416
           W T++
Sbjct: 365 WKTLL 369



 Score = 42.7 bits (99), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 38/166 (22%), Positives = 63/166 (37%), Gaps = 33/166 (19%)

Query: 486 IDMYAKCG-------------------------------SITDARLVFDMMNDWNEVSWN 514
           + MY+K G                                + +AR VFD M D    +WN
Sbjct: 1   MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60

Query: 515 AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
           AMI+G      + E L +F  M   G+ P+  T   V S  +    +  G+         
Sbjct: 61  AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQ-IHGYTIK 119

Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
           YG+E  +   +S+  +  R G L     +I  +P + +++ W  L+
Sbjct: 120 YGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVR-NLVAWNTLI 164


>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
 gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 646

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 237/614 (38%), Positives = 346/614 (56%), Gaps = 67/614 (10%)

Query: 257 TIRVAKSAHGCALKTCYEMDLYVAVALL------DLYTKSGEISNARRIFEEMPKKDVIP 310
           TIR     H   +K+    D   A  +L      DL+ +  ++  A +IF +MP+++   
Sbjct: 35  TIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHR--DLDYAHKIFNQMPQRNCFS 92

Query: 311 WSFMIARYAQTD--LSIDAVELFCRM-RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
           W+ +I  ++++D   ++ A+ LF  M    FV PN+FTF SVL+ACA    +  G QIH 
Sbjct: 93  WNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHG 152

Query: 368 LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF------------AESPKRNH--VTWN 413
           L ++ G   D FV + L+ +Y  CG M+++  LF             +  KR+   V WN
Sbjct: 153 LALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWN 212

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQV-----------------PATEV----------- 445
            MI GY++LG+   A ++F KM +  V                  A EV           
Sbjct: 213 VMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRP 272

Query: 446 ---TYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVF 502
              T  SVL A + L +LE G  +H     +   +D V+ +ALIDMY+KCG I  A  VF
Sbjct: 273 NYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVF 332

Query: 503 DMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLE 562
           + +   N ++W+AMI+G+++HG + + +  F  M+Q G RP+++ ++ +L+ACS+GGL+E
Sbjct: 333 ERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVE 392

Query: 563 QGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           +G  YF  MV+  G+EP IEHY  MV LLGR+G LD+A + I  +P +P  +IW+ALLGA
Sbjct: 393 EGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGA 452

Query: 623 CIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEP 671
           C +  NVE+G+  A  ++D  P D   +V LSN+YA   +W           EK   K+P
Sbjct: 453 CRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDP 512

Query: 672 GLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKE 731
           G S I+  G++H F   D SH     I  ML  ++ K R AGY P  + VL ++ E++KE
Sbjct: 513 GCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKE 572

Query: 732 RYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRF 791
             L  HSEK+A AF L    P  PIRI+KNLRIC DCH++IK+ISK+ +R+I +RD  RF
Sbjct: 573 NVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRF 632

Query: 792 HHFQDGCCSCGDFW 805
           HHFQDG CSC D+W
Sbjct: 633 HHFQDGSCSCMDYW 646



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 162/347 (46%), Gaps = 48/347 (13%)

Query: 226 ALNFFSQMRAVGF-KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL- 283
           A+  F +M +  F +PN FTF  VLKAC     I+  K  HG ALK  +  D +V   L 
Sbjct: 111 AITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLV 170

Query: 284 --------------------------------------------LDLYTKSGEISNARRI 299
                                                       +D Y + G+   AR +
Sbjct: 171 RMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARML 230

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL 359
           F++M ++ V+ W+ MI+ Y+      DAVE+F  M++  + PN  T VSVL A + +  L
Sbjct: 231 FDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSL 290

Query: 360 DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGY 419
           +LG  +H      G+  D  + +AL+D+Y+KCG +E ++ +F   P+ N +TW+ MI G+
Sbjct: 291 ELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGF 350

Query: 420 VQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN-YDMD 478
              G+ G A+  F KM +  V  ++V Y ++L AC+    +E G +     V  +  +  
Sbjct: 351 AIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPR 410

Query: 479 VVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHG 524
           +     ++D+  + G + +A   + +M    ++V W A++    M G
Sbjct: 411 IEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQG 457



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 108/451 (23%), Positives = 189/451 (41%), Gaps = 75/451 (16%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLN----RLPDATKLFDEMPERNTISFVTTIQGYT 133
           IH   +K G   D  A   +L      +     L  A K+F++MP+RN  S+ T I+G++
Sbjct: 42  IHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFS 101

Query: 134 VSSQ---FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDS 190
            S +    +     +  +  E  E N F F + LK     G  +    +     K G   
Sbjct: 102 ESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGG 161

Query: 191 NAFVGTALIDAFSVCGCVE----------------------------------------- 209
           + FV + L+  + +CG ++                                         
Sbjct: 162 DEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRL 221

Query: 210 ----FARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVL 249
                AR +FD +                 N  F++A+  F +M+    +PN  T   VL
Sbjct: 222 GDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVL 281

Query: 250 KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
            A   L ++ + +  H  A  +   +D  +  AL+D+Y+K G I  A  +FE +P+++VI
Sbjct: 282 PAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVI 341

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
            WS MI  +A    + DA++ FC+MRQA V P+   ++++L AC+    ++ G +  S +
Sbjct: 342 TWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQM 401

Query: 370 VRV-GLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMIVGYVQLG--EV 425
           V V GL   +     ++D+  + G ++ + E     P K + V W  ++      G  E+
Sbjct: 402 VSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEM 461

Query: 426 GKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           GK +   + +L + VP     Y ++    AS
Sbjct: 462 GKRV---ANILMDMVPHDSGAYVALSNMYAS 489


>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
 gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
          Length = 562

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 209/534 (39%), Positives = 317/534 (59%), Gaps = 11/534 (2%)

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L++ + + G++ +A ++F+EM +++V  W+ M++   Q + + + + LF  M +    P+
Sbjct: 29  LINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMHELGFLPD 88

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           +FT  SVL+ CA +     G Q+H+ V++ G   ++ V ++L  +Y K G +    ++  
Sbjct: 89  EFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIK 148

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
               RN V WNT+I G  Q G     + +++ M    +   ++T  SV+ + A LA L  
Sbjct: 149 AMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQ 208

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G Q+H   +KA  +  V V ++LI MY+KCG + D+          + V W++MI+ Y  
Sbjct: 209 GQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYGF 268

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
           HG   E + +F+ M+Q G   N++TF+ +L ACS+ GL E+G  +FK MV  YG++P +E
Sbjct: 269 HGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLE 328

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDF 642
           HYT +V LLGR+G LD+A  +I  +P +  V+IW+ LL AC IH N ++   +A+ IL  
Sbjct: 329 HYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMATRTAEEILRL 388

Query: 643 EPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTS 691
            P+D AT+VLLSNI+A A+ W           ++   KEPG+SW+E +  V  F  GD S
Sbjct: 389 NPQDSATYVLLSNIHASAKRWKDVSKVRTTMRDRNVKKEPGVSWLEVKNRVFQFSMGDKS 448

Query: 692 HADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMP 751
           H     I   L+ L  + +  GY+PD + V  D   +EKE  L  HSEKLA+AF L  +P
Sbjct: 449 HPMSEEIDLYLKELMEEMKLRGYVPDTATVFHDTDSEEKENSLVNHSEKLAIAFGLMNIP 508

Query: 752 PSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           P SPIR++KNLRIC DCH AIK+IS I  REII+RD  RFHHF+ G CSCGD+W
Sbjct: 509 PGSPIRVMKNLRICSDCHVAIKLISDINNREIIVRDTSRFHHFKHGKCSCGDYW 562



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 192/427 (44%), Gaps = 58/427 (13%)

Query: 100 VYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFA 159
           +Y K+  + +A   F+ MP RN +S    I G+        A+ +F     E  E N   
Sbjct: 1   MYFKMGEIQEAIAFFNAMPMRNIMSHNILINGHVQHGDLDSAIKVFD----EMLERNVAT 56

Query: 160 FTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF 219
           + A                                         V G ++F        F
Sbjct: 57  WNAM----------------------------------------VSGLIQFE-------F 69

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           N   E  L  F +M  +GF P+ FT   VL+ C GL      K  H   LK  YE +L V
Sbjct: 70  N---ENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVV 126

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
             +L  +Y KSG +    ++ + M  ++V+ W+ +IA  AQ       ++L+  M+ + +
Sbjct: 127 GSSLAHMYMKSGSLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGL 186

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
            P++ T VSV+ + A +  L  G QIH+  ++ G  S V V ++L+ +Y+KCG +E+S++
Sbjct: 187 RPDKITLVSVISSSAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMK 246

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
              +    + V W++MI  Y   G   +A+ +F +M +E +   +VT+ S+L AC+    
Sbjct: 247 ALLDCEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGL 306

Query: 460 LEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDAR-LVFDMMNDWNEVSWNAM 516
            E GM    L V+  Y +   + +   ++D+  + G + +A  ++  M  + + V W  +
Sbjct: 307 KEKGMGFFKLMVE-KYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTL 365

Query: 517 ISGYSMH 523
           +S   +H
Sbjct: 366 LSACRIH 372



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 132/256 (51%), Gaps = 2/256 (0%)

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
           + ++   N L++ + + G +++++++F E  +RN  TWN M+ G +Q       + +F +
Sbjct: 20  MRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFRE 79

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGS 494
           M E      E T  SVLR CA L A   G QVH   +K  Y+ ++VV ++L  MY K GS
Sbjct: 80  MHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGS 139

Query: 495 ITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSA 554
           + +   V   M   N V+WN +I+G + +G    VL ++++M+  G RP+ +T V V+S+
Sbjct: 140 LGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISS 199

Query: 555 CSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVM 614
            +    L QG+      +   G    +   +S++S+  + G L+ + K +      P  +
Sbjct: 200 SAELATLFQGQQIHAEAI-KAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCE-HPDSV 257

Query: 615 IWRALLGACIIHNNVE 630
           +W +++ A   H   E
Sbjct: 258 LWSSMIAAYGFHGRGE 273



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 159/349 (45%), Gaps = 26/349 (7%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           ++ + N+L+N +V+   L  A K+FDEM ERN  ++   + G  +  +F E  GLF  L 
Sbjct: 22  NIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGL-IQFEFNEN-GLF--LF 77

Query: 150 REGHEL----NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVC 205
           RE HEL    + F   + L+    +  +     V A V K G++ N  VG++L   +   
Sbjct: 78  REMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKS 137

Query: 206 GCVEFARKVFDGLF----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVL 249
           G +    KV   +                 N  FE  L+ ++ M+  G +P+  T   V+
Sbjct: 138 GSLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVI 197

Query: 250 KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
            +   L T+   +  H  A+K      + V  +L+ +Y+K G + ++ +   +    D +
Sbjct: 198 SSSAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSV 257

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
            WS MIA Y       +AV LF +M Q  +  N  TF+S+L AC+     + G     L+
Sbjct: 258 LWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLM 317

Query: 370 V-RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMI 416
           V + GL   +     ++D+  + G ++ +  +    P + + V W T++
Sbjct: 318 VEKYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLL 366



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 71/286 (24%), Positives = 121/286 (42%), Gaps = 37/286 (12%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           +H  VLK G   +L   + L ++Y+K   L +  K+   M  RN +++ T I G   +  
Sbjct: 111 VHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGH 170

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC--VFACVYKLGHDSNAFVG 195
           F   + L++ +   G  L P   T    +  S   A L     + A   K G +S   V 
Sbjct: 171 FEGVLDLYNMMKMSG--LRPDKITLVSVISSSAELATLFQGQQIHAEAIKAGANSAVAVL 228

Query: 196 TALIDAFSVCGCVEFARKVF------DGL----------FNDCFEEALNFFSQMRAVGFK 239
           ++LI  +S CGC+E + K        D +          F+   EEA++ F QM   G  
Sbjct: 229 SSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLG 288

Query: 240 PNNFTFAFVLKAC-------LGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
            N+ TF  +L AC        G+   ++    +G   +    ++ Y  V  +DL  +SG 
Sbjct: 289 GNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPR----LEHYTCV--VDLLGRSGC 342

Query: 293 ISNARRIFEEMP-KKDVIPWSFMIAR---YAQTDLSIDAVELFCRM 334
           +  A  +   MP + DV+ W  +++    +   D++    E   R+
Sbjct: 343 LDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMATRTAEEILRL 388



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 33/166 (19%)

Query: 488 MYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR-------- 539
           MY K G I +A   F+ M   N +S N +I+G+  HG     +KVFD M +R        
Sbjct: 1   MYFKMGEIQEAIAFFNAMPMRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAM 60

Query: 540 -----------------------GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
                                  G+ P+  T   VL  C+ G           + V  YG
Sbjct: 61  VSGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCA-GLRASYAGKQVHAYVLKYG 119

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
            E  +   +S+  +  ++G L +  K+I+ +  + +V+ W  L+  
Sbjct: 120 YEFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIR-NVVAWNTLIAG 164


>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
 gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
          Length = 744

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 226/655 (34%), Positives = 357/655 (54%), Gaps = 78/655 (11%)

Query: 229 FFSQMRAVGFKPNNFTFAFVLKACLGL---DTIRVAKSAHGCALKTCY-EMDLYVAVALL 284
            F +MR  G +P+ FTF F+ K         ++ +    H   L+T       +V+ +L+
Sbjct: 90  LFRRMRRAGVRPDGFTFHFLFKCSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLI 149

Query: 285 DLYTKSGEISNARRIFEEM-------------------------------PKKDVIPWSF 313
            +Y + G  ++ARR F+E+                               P +DVI W+ 
Sbjct: 150 HMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTS 209

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
           +IA Y++ + + +AV  F  M    +AP++ T ++VL ACA ++ L+LG  +H LV   G
Sbjct: 210 LIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKG 269

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVE--------------------------------LF 401
           + +   +  AL+D+YAKCG   ++ +                                LF
Sbjct: 270 MPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLF 329

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
            E   R+ +T+N+M+ GY+  G++ +A+++F  M    +     T  ++L ACASL AL+
Sbjct: 330 DEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQ 389

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
            G  +H    +   + D+ +  AL+DMY KCG + +A +VF  M   +  +W AMI+G +
Sbjct: 390 QGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLA 449

Query: 522 MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
            +G+    L+ F  M+  G++PN+++++ VL+ACS+  LL +G  YF  M   Y I P I
Sbjct: 450 FNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQI 509

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
           EHY  M+ LLGR+G LD+A  L++ +P QP+ +IW ++L AC +H ++++ + +A+H+L 
Sbjct: 510 EHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVHKHIDLAQCAAEHLLK 569

Query: 642 FEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDT 690
            EP+++  +V L NIY  +R WE A+            K  G S I   G VH F   D 
Sbjct: 570 LEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKTAGYSSITVAGQVHKFVVSDK 629

Query: 691 SHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKM 750
           SH  +  I  MLE ++ + +  GY P  S +  DV E+EKE+ L  HSEKLA+AF L  +
Sbjct: 630 SHPRILEIIAMLEEISHRLKSLGYSPLTSQITVDVDEEEKEQALLAHSEKLAIAFGLINL 689

Query: 751 PPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            P+ P+ I KNLR+C DCH+AIK+IS++  REII+RD  RFHHF++G CSC DFW
Sbjct: 690 APNLPVHIRKNLRVCEDCHSAIKLISRLWNREIIVRDRSRFHHFREGTCSCNDFW 744



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 161/377 (42%), Gaps = 50/377 (13%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D  A  +L++   K+  L D   L  + P R+ IS+ + I  Y+ +++  EAVG F T+ 
Sbjct: 172 DAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTML 231

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
             G   +     A L     +   EL   +   V + G  ++  +  ALID ++ CG   
Sbjct: 232 SHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFG 291

Query: 210 FARKVFDGL---------------------------------------FNDC-------- 222
            A++VFD L                                       FN          
Sbjct: 292 HAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSG 351

Query: 223 -FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
              EAL  F  MR    + +NFT   +L AC  L  ++  ++ H C  +   E D+Y+  
Sbjct: 352 QLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGT 411

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           ALLD+Y K G +  A  +F+ M K+DV  W+ MIA  A   +   A+E F +MR     P
Sbjct: 412 ALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQP 471

Query: 342 NQFTFVSVLQACATMEGLDLGN-QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           N  ++++VL AC+    L+ G      + +   +   +     ++D+  + G ++ +++L
Sbjct: 472 NSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDL 531

Query: 401 FAESP-KRNHVTWNTMI 416
               P + N V W +++
Sbjct: 532 VKTMPIQPNAVIWASIL 548



 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 55/247 (22%), Positives = 103/247 (41%), Gaps = 20/247 (8%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L +C     LQ    +H  + ++    D++    LL++Y+K  R+ +AT +F  M +R+ 
Sbjct: 379 LTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDV 438

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
            ++   I G   +     A+  F  +  +G + N  ++ A L             C  +C
Sbjct: 439 HTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTA-----------CSHSC 487

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-FNDCFEEALNFFSQMRAVGFKPN 241
           +   G          +   +++   +E    + D L  +   +EA++    M     +PN
Sbjct: 488 LLNEGR----LYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTM---PIQPN 540

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
              +A +L AC     I +A+ A    LK   + D  V V L ++Y  S +  NA +I  
Sbjct: 541 AVIWASILSACRVHKHIDLAQCAAEHLLKLEPDED-GVYVQLYNIYIDSRQWENASKIRM 599

Query: 302 EMPKKDV 308
            M ++ V
Sbjct: 600 LMEERQV 606


>gi|326522845|dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 776

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 238/713 (33%), Positives = 374/713 (52%), Gaps = 52/713 (7%)

Query: 140 EAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALI 199
           EA+G+     R+G  +    +   L   V  G       +   + K G  ++ FV T+L+
Sbjct: 63  EAMGML----RDGQTVQSAMYVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLV 118

Query: 200 DAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNF 243
           + +  C     AR++FDG+                 N     AL  F +M  +G  P+++
Sbjct: 119 NVYMRCASSRDARRLFDGMPDKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHY 178

Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
           T   +L AC     I + +  HG ++K   +    +  +L  LY KSG++ +  R F+  
Sbjct: 179 TLGGMLSACSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGT 238

Query: 304 PKKDVIPWSFMIARYAQTDLSID-AVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG 362
           P K+VI W+ MI+  A+ +  +D  + LF  M +  V PN+FT  SV+  C     + LG
Sbjct: 239 PDKNVITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLG 298

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
            Q+ +   +VG  +++ V N+ M +Y + G  + ++ LF E    + +TWN MI GY Q+
Sbjct: 299 KQVQAFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQI 358

Query: 423 GEVGK-----------AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
            +  K           A+ +F  ++  ++     T+SS+L  C+++ ALE G Q+H  T+
Sbjct: 359 MDSAKDDLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTI 418

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
           K     DVVV +AL++MY KCGSI  A   F  M     V+W +MISGYS HG S + ++
Sbjct: 419 KTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQ 478

Query: 532 VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLL 591
           +F+ M   G RPN +TFV +LSACS  GL+E+ E YF  M   Y IEP ++HY  MV + 
Sbjct: 479 LFEDMVLSGARPNEITFVSLLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMF 538

Query: 592 GRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHV 651
            R G LD A   I+   F+P+  IW +L+  C  H N+E+   +A  +L+ +P+   T+V
Sbjct: 539 VRLGRLDDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVIETYV 598

Query: 652 LLSNIYAMARSWEKAAS-------KEPGL----SWIENQGMVHYFRAGDTSHADMNIIRG 700
           LL N+Y     W   A        ++ G+    SWI  +  V++FRA D +H     +  
Sbjct: 599 LLLNMYISTGRWRDVARVRKLAKHEDVGVLRDRSWIAIRDKVYFFRADDMTHPQATELYQ 658

Query: 701 MLEWLNMKSRKAGYIPDLSA--VLRDVREDEKER-------YLWVHSEKLALAFALFKMP 751
           +LE L  K++  GY P  +A  +L D +E + ++        +  HSE+LA+A  L + P
Sbjct: 659 LLENLLEKAKAVGYEPYQNAPELLFDSKEGDDDKPAAAAGSLIKHHSERLAVALGLLETP 718

Query: 752 PSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
           P + +R+ KN+ +C DCH++IK  S +  REI++RD  R H F+DG CSCGDF
Sbjct: 719 PGATVRVTKNITMCRDCHSSIKYFSLLANREIVVRDSKRLHKFKDGRCSCGDF 771



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 145/501 (28%), Positives = 240/501 (47%), Gaps = 32/501 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
            S  Y   L  C++   L  A  +H  ++K G   D+F    L+NVY++     DA +LF
Sbjct: 75  QSAMYVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCASSRDARRLF 134

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D MP++N +++   I G+T++S+   A+ +F  +   G   + +     L    +    +
Sbjct: 135 DGMPDKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSACSAARRID 194

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG-----------LFNDCF 223
           L   V     K G D+   +G +L   +   G +E   + F G           + + C 
Sbjct: 195 LGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVITWTTMISSCA 254

Query: 224 EE------ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
           E+       L+ F  M   G  PN FT   V+  C     + + K       K   E +L
Sbjct: 255 EDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANL 314

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQ------TDL-----SID 326
            V  + + LY + GE   A R+FEEM    +I W+ MI+ YAQ       DL        
Sbjct: 315 PVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQ 374

Query: 327 AVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMD 386
           A++LF  + ++ + P+ FTF S+L  C+ M  L+ G QIH+  ++ G LSDV V++AL++
Sbjct: 375 ALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVN 434

Query: 387 VYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVT 446
           +Y KCG +E + + F E P R  VTW +MI GY Q G    A+ +F  M+       E+T
Sbjct: 435 MYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEIT 494

Query: 447 YSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFD 503
           + S+L AC S A L    + +   ++  Y ++ +V +   ++DM+ + G + DA   +  
Sbjct: 495 FVSLLSAC-SYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSFIKR 553

Query: 504 MMNDWNEVSWNAMISGYSMHG 524
              + NE  W+++++G   HG
Sbjct: 554 TGFEPNEAIWSSLVAGCRSHG 574


>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
 gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
          Length = 673

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 224/563 (39%), Positives = 335/563 (59%), Gaps = 27/563 (4%)

Query: 265 HGCALKT-CYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDL 323
           H  AL++  +  D Y A ALL +Y       +ARR F+E+P  + +  + M + Y + +L
Sbjct: 116 HLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRNNL 175

Query: 324 SIDAVELFCRMRQAFVAPNQFTFVS------VLQACATMEGLDLGNQIHSLVVRVGLLSD 377
              ++ELF    +A +A +  + V          A A +    +   +H+L+ ++G   +
Sbjct: 176 VYHSLELF----RAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERN 231

Query: 378 VFVSNALMDVYAKCGR--MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKM 435
             V N ++D YAK G   +E + ++F ++ +R+ V+WN+MI  Y Q G   +A+ ++SKM
Sbjct: 232 AGVVNTMLDSYAKGGSRDLEVARKVF-DTMERDVVSWNSMIALYAQNGMSAEAIGLYSKM 290

Query: 436 LE--EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCG 493
           L     +    V  S+VL ACA   A++ G ++H   V+   + +V V  +++DMY+KCG
Sbjct: 291 LNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCG 350

Query: 494 SITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLS 553
            +  A   F  + + N +SW+AMI+GY MHG   E L++F  M++ G RPN +TF+ VL+
Sbjct: 351 RVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLA 410

Query: 554 ACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSV 613
           ACS+ GLL++G  ++ +M   +GIE  +EHY  MV LLGRAG LD+A  LI+ +  +P  
Sbjct: 411 ACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDA 470

Query: 614 MIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE--------- 664
            IW ALL AC IH NVE+  +S + + + +  +   +VLLSNIYA AR W+         
Sbjct: 471 AIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIRLLV 530

Query: 665 --KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVL 722
             +   K PG S  E +G ++ F  GD SH     I   LE L  + ++AGY+P+  +VL
Sbjct: 531 KTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGSVL 590

Query: 723 RDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQRE 782
            D+ E+EKE  L +HSEKLA+AFAL    P S I IIKNLR+C DCHTA+K I+KI +RE
Sbjct: 591 HDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKITERE 650

Query: 783 IIIRDVHRFHHFQDGCCSCGDFW 805
           IIIRD+ RFHHF+DG CSC D+W
Sbjct: 651 IIIRDLQRFHHFKDGLCSCRDYW 673



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 169/356 (47%), Gaps = 35/356 (9%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLF---- 145
           D ++ + LL++Y   +R  DA + FDE+P+ N +       GY  ++    ++ LF    
Sbjct: 128 DPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMI 187

Query: 146 ----STLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDA 201
               +++  E   L   AF+A  +V      A L     A + K+G + NA V   ++D+
Sbjct: 188 ASDSASVVDEAAAL--VAFSASARVPDRGVTASL----HALIAKIGFERNAGVVNTMLDS 241

Query: 202 FSVCGC--VEFARKVFDGLFNDCFE---------------EALNFFSQMRAVG--FKPNN 242
           ++  G   +E ARKVFD +  D                  EA+  +S+M  VG   K N 
Sbjct: 242 YAKGGSRDLEVARKVFDTMERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNA 301

Query: 243 FTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEE 302
              + VL AC     I+  K  H   ++   E ++YV  +++D+Y+K G +  A R F +
Sbjct: 302 VALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRK 361

Query: 303 MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG 362
           + +K+++ WS MI  Y       +A+E+F  M+++ + PN  TF+SVL AC+    LD G
Sbjct: 362 IKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEG 421

Query: 363 NQ-IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE-SPKRNHVTWNTMI 416
               +++    G+ + V     ++D+  + G ++ +  L  E   K +   W  ++
Sbjct: 422 RYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALL 477



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 101/223 (45%), Gaps = 23/223 (10%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N+ + +  L +C     +QT   IH QV++ G   +++    ++++Y K  R+  A++ F
Sbjct: 300 NAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAF 359

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
            ++ E+N +S+   I GY +  +  EA+ +F+ + R G   N   +  F+ VL       
Sbjct: 360 RKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPN---YITFISVLA------ 410

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN-DCFEEALNFFSQM 233
                 AC +    D   +   A+   F +   VE    + D L    C +EA +   +M
Sbjct: 411 ------ACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEM 464

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
           +    KP+   +  +L AC     + +A+     ++K  +E+D
Sbjct: 465 K---VKPDAAIWGALLSACRIHKNVELAE----MSVKRLFELD 500



 Score = 45.8 bits (107), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 1/73 (1%)

Query: 465 QVHCLTVKAN-YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMH 523
           Q+H L +++  +  D   A+AL+ MY  C    DAR  FD + D N V   AM SGY  +
Sbjct: 114 QLHLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRN 173

Query: 524 GLSAEVLKVFDLM 536
            L    L++F  M
Sbjct: 174 NLVYHSLELFRAM 186


>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
          Length = 761

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 265/773 (34%), Positives = 401/773 (51%), Gaps = 76/773 (9%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL-FDEMPERNTISFVTTIQGYTVSS 136
           +H Q++        +   +L+N   +L   P  T L F+     N   F + ++ Y+   
Sbjct: 20  LHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPNVFVFTSMLRFYSHLQ 79

Query: 137 QFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGT 196
              + V +F  +   G   + F +   +K   + G         A V KLGH S+AFV  
Sbjct: 80  DHAKVVLMFEHMQGCGVRPDAFVYPILIKSAGNGGIG-----FHAHVLKLGHGSDAFVRN 134

Query: 197 ALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLD 256
           A+ID ++  G +  ARKVFD + +  +E  +  ++ M +  +K  +   A  L       
Sbjct: 135 AVIDMYARLGPIGHARKVFDEIPD--YERKVADWNAMVSGYWKWESEGQAQWL------- 185

Query: 257 TIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIA 316
                            E ++    A++  Y K  ++  ARR F+ MP++ V+ W+ M++
Sbjct: 186 ------------FDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLS 233

Query: 317 RYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLS 376
            YAQ  L+ + + LF  M  A + P++ T+V+V+ AC++     L   +   + +  +  
Sbjct: 234 GYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQL 293

Query: 377 DVFVSNALMDVYAKCGRM-------------ENSV-------------------ELFAES 404
           + FV  AL+D+YAKCG +              NSV                   ELF   
Sbjct: 294 NCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTM 353

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE-EQVPATEVTYSSVLRACASLAALEPG 463
           P RN VTWN+MI GY Q G+   A+ +F +M+  +++   EVT  SV+ AC  L ALE G
Sbjct: 354 PGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELG 413

Query: 464 MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMH 523
             V     +    + +   NA+I MY++CGS+ DA+ VF  M   + VS+N +ISG++ H
Sbjct: 414 NWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAH 473

Query: 524 GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEH 583
           G   E + +   M++ G  P+ +TF+GVL+ACS+ GLLE+G   F+S+      +P I+H
Sbjct: 474 GHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIK-----DPAIDH 528

Query: 584 YTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFE 643
           Y  MV LLGR G L+ A + +E +P +P   ++ +LL A  IH  VE+G L+A  + + E
Sbjct: 529 YACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELE 588

Query: 644 PEDEATHVLLSNIYAMARSWEK-----------AASKEPGLSWIENQGMVHYFRAGDTSH 692
           P++    +LLSNIYA A  W+               K  G SW+E  G +H F   D SH
Sbjct: 589 PDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSH 648

Query: 693 ADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPP 752
              + I  +L  L  K R+AGYI D S VLRDV E+EKE  +  HSEKLA+ +AL     
Sbjct: 649 ERSDDIYQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEA 708

Query: 753 SSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            + IR++KNLR+C DCHTAIK+ISK+  R II+RD +RFH F DG CSC D+W
Sbjct: 709 GAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 761


>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Cucumis sativus]
          Length = 611

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 220/606 (36%), Positives = 344/606 (56%), Gaps = 45/606 (7%)

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
           F   L+ C    +   A   H   +K  ++    ++  LLD+Y K G I  A ++F+EMP
Sbjct: 6   FLHQLQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMP 65

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQACATMEGLDLGN 363
            +D + W+ ++  + +  +    + +   M     + P+ F F  +++AC+++  L LG 
Sbjct: 66  NRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGK 125

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGR------------MENSV------------- 398
           Q+H+  +      D  V ++L+D+Y KCG+             +NSV             
Sbjct: 126 QVHARFMLSFFCDDEVVKSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISGYARSG 185

Query: 399 ------ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATE-VTYSSVL 451
                 +LF ++P RN  +W  +I G +Q G    +  +F++M  E +   + +  SSV+
Sbjct: 186 RKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVV 245

Query: 452 RACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEV 511
             CA+LA LE G Q+H L +   ++  + ++NAL+DMYAKC  I  A+ +F  M   + +
Sbjct: 246 GGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVI 305

Query: 512 SWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSM 571
           SW ++I G + HG + E L ++D M     +PN +TFVG+L ACS+ GL+ +G   F+SM
Sbjct: 306 SWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSM 365

Query: 572 VANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEI 631
             +Y I P ++HYT ++ LL R+GHLD+A  L++ IPF+P    W +LL AC+ HNN+E+
Sbjct: 366 TTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEM 425

Query: 632 GRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQG 680
           G   A  +LD +PED +T++LLSN+YA A  W   +            KEPG S I+   
Sbjct: 426 GVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFGK 485

Query: 681 MVHYFRAGDT-SHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSE 739
               F AG++  H   N I  +L+ L+ + RK GY+P+ S VL D+ + EKE+ L+ HSE
Sbjct: 486 DSQVFHAGESCDHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLFWHSE 545

Query: 740 KLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCC 799
           +LA+A+ L K  P + IRI+KNLRIC DCH  +K IS IV+REI++RD  R+HHF++G C
Sbjct: 546 RLAVAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIMVRDATRYHHFKEGKC 605

Query: 800 SCGDFW 805
           SC DFW
Sbjct: 606 SCNDFW 611



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/392 (24%), Positives = 193/392 (49%), Gaps = 51/392 (13%)

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN-DCFEEALNFFSQMRAV----- 236
           + K G D ++ +   L+D +  CG +  A ++FD + N D    A    +  +A+     
Sbjct: 29  IIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKALIPRRT 88

Query: 237 -----------GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
                      G +P++F FA +++AC  L  +R+ K  H   + + +  D  V  +L+D
Sbjct: 89  LSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVVKSSLID 148

Query: 286 LYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM----------- 334
           +YTK G+  +AR +F+ +  K+ + W+ MI+ YA++    +A++LF +            
Sbjct: 149 MYTKCGQPDDARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTAL 208

Query: 335 ---------------------RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
                                R+     +     SV+  CA +  L+LG QIH LV+ +G
Sbjct: 209 ISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALG 268

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
             S +F+SNAL+D+YAKC  +  + ++F   P+++ ++W ++IVG  Q G+  +A+ ++ 
Sbjct: 269 FESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYD 328

Query: 434 KMLEEQVPATEVTYSSVLRACASLAALEPGMQV-HCLTVKANYDMDVVVANALIDMYAKC 492
           +M+  ++   EVT+  +L AC+    +  G ++   +T   + +  +     L+D+ ++ 
Sbjct: 329 EMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRS 388

Query: 493 GSITDARLVFDMMN-DWNEVSWNAMISGYSMH 523
           G + +A  + D +    +E +W +++S    H
Sbjct: 389 GHLDEAENLLDKIPFKPDEPTWASLLSACMRH 420



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/449 (23%), Positives = 199/449 (44%), Gaps = 53/449 (11%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N   +   LQ C +      A  +H Q++K G       +N LL+VY K   +P A +LF
Sbjct: 2   NISHFLHQLQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLF 61

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH-REGHELNPFAFTAFLKVLVSMGWA 173
           DEMP R+ +S+ + +  +  +      + + +T+   +G + + F F   ++   S+G+ 
Sbjct: 62  DEMPNRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYL 121

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF-------------- 219
            L   V A         +  V ++LID ++ CG  + AR VFD +               
Sbjct: 122 RLGKQVHARFMLSFFCDDEVVKSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISGY 181

Query: 220 ---------NDCFEEA------------------------LNFFSQMRAVGFK-PNNFTF 245
                     D F +A                         + F++MR  G    +    
Sbjct: 182 ARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVL 241

Query: 246 AFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPK 305
           + V+  C  L  + + K  HG  +   +E  L+++ AL+D+Y K  +I  A+ IF  MP+
Sbjct: 242 SSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPR 301

Query: 306 KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
           KDVI W+ +I   AQ   + +A+ L+  M  + + PN+ TFV +L AC+    +  G ++
Sbjct: 302 KDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGREL 361

Query: 366 -HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMIVGYVQLG 423
             S+     +   +     L+D+ ++ G ++ +  L  + P K +  TW +++   ++  
Sbjct: 362 FRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHN 421

Query: 424 EVGKAMIMFSKMLE--EQVPATEVTYSSV 450
            +   + +  ++L+   + P+T +  S+V
Sbjct: 422 NLEMGVRIADRVLDLKPEDPSTYILLSNV 450



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 100/468 (21%), Positives = 188/468 (40%), Gaps = 74/468 (15%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           +A  +++C     L+    +H + +    C D    + L+++Y K  +  DA  +FD + 
Sbjct: 108 FACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVVKSSLIDMYTKCGQPDDARAVFDSIL 167

Query: 119 ERNTISFVTTIQGYTVSSQFVEAV-------------------------------GLFST 147
            +N++S+ + I GY  S +  EA+                                LF+ 
Sbjct: 168 FKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNE 227

Query: 148 LHREGHEL-NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCG 206
           + REG ++ +P   ++ +    ++   EL   +   V  LG +S  F+  AL+D ++ C 
Sbjct: 228 MRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCS 287

Query: 207 CVEFARKVFDGL-FNDCF---------------EEALNFFSQMRAVGFKPNNFTFAFVLK 250
            +  A+ +F  +   D                 EEAL  + +M     KPN  TF  +L 
Sbjct: 288 DILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLY 347

Query: 251 ACLGLDTIRVAKSAHGCALKTCYEMD--LYVAVALLDLYTKSGEISNARRIFEEMP-KKD 307
           AC     +   +     ++ T Y ++  L     LLDL ++SG +  A  + +++P K D
Sbjct: 348 ACSHAGLVSRGRELFR-SMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPD 406

Query: 308 VIPWSFMIA---RYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG--LDLG 362
              W+ +++   R+   ++ +   +    ++     P+ +  +S + A A M G    + 
Sbjct: 407 EPTWASLLSACMRHNNLEMGVRIADRVLDLKPE--DPSTYILLSNVYAGAEMWGSVSKVR 464

Query: 363 NQIHSLVVR---------VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
             + S+ VR          G  S VF +    D   K        +L AE  KR +V   
Sbjct: 465 KLMSSMEVRKEPGYSSIDFGKDSQVFHAGESCDHPMKNEICNLLKDLDAEMRKRGYVPNT 524

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLE------EQVPATEVTYSSVLRACA 455
           + ++  ++  E  K +   S+ L       + VP T +     LR C 
Sbjct: 525 SFVLYDIEQQEKEKQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRICG 572


>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
          Length = 698

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 228/661 (34%), Positives = 342/661 (51%), Gaps = 79/661 (11%)

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
           F EA+     M A GF P  FT   VL +C       V +  H   +K      + VA +
Sbjct: 39  FGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANS 98

Query: 283 LLDLYTKSGEISNARRIFEEMP-------------------------------KKDVIPW 311
           +L++Y K G+   A  +FE MP                                + ++ W
Sbjct: 99  VLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSW 158

Query: 312 SFMIARYAQTDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV 370
           + MIA Y Q  L   A++LF RM  ++ +AP++FT  SVL ACA +  + +G Q+H+ ++
Sbjct: 159 NAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYIL 218

Query: 371 RVGLLSDVFVSNALMDVYAKCGRMENSV-------------------------------- 398
           R  +  +  V+NAL+  YAK G +EN+                                 
Sbjct: 219 RTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESA 278

Query: 399 -ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
            E+F     R+ V W  MIVGY Q G   +A+ +F  M+         T ++VL  CASL
Sbjct: 279 REMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASL 338

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE--VSWNA 515
           A L+ G Q+HC  +++  +    V+NA+I MYA+ GS   AR +FD +  W +  ++W +
Sbjct: 339 ACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVC-WRKETITWTS 397

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           MI   + HG   E + +F+ M + G  P+ +T+VGVLSACS+ G + +G+ Y+  +   +
Sbjct: 398 MIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEH 457

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS 635
            I P + HY  MV LL RAG   +A + I  +P +P  + W +LL AC +H N E+  L+
Sbjct: 458 QIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELA 517

Query: 636 AQHILDFEPEDEATHVLLSNIYAM-------ARSW----EKAASKEPGLSWIENQGMVHY 684
           A+ +L  +P +   +  ++N+Y+        AR W    EKA  KE G SW   +  +H 
Sbjct: 518 AEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHV 577

Query: 685 FRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALA 744
           F A D  H   + +  M   +  + + AG++PDL +VL DV ++ KE  L  HSEKLA+A
Sbjct: 578 FGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIA 637

Query: 745 FALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
           F L   P  + +R++KNLR+C DCH AIK ISK+  REII+RD  RFHHF+DG CSC D+
Sbjct: 638 FGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDY 697

Query: 805 W 805
           W
Sbjct: 698 W 698



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/399 (24%), Positives = 175/399 (43%), Gaps = 57/399 (14%)

Query: 71  DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQ 130
           D +TA T    V ++     + + N ++++   L R+  A  LF+ MP+R+ +S+   I 
Sbjct: 108 DSETATT----VFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIA 163

Query: 131 GYTVSSQFVEAVGLFST-LHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHD 189
           GY  +    +A+ LFS  LH      + F  T+ L    ++G   +   V A + +    
Sbjct: 164 GYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMA 223

Query: 190 SNAFVGTALIDAFSVCGCVEFARKVFD--------------------------------G 217
            N+ V  ALI  ++  G VE AR++ D                                G
Sbjct: 224 YNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFG 283

Query: 218 LFND-----------------CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRV 260
           + N+                   +EA++ F  M   G +PN++T A VL  C  L  +  
Sbjct: 284 VMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDY 343

Query: 261 AKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIARYA 319
            K  H  A+++  E    V+ A++ +Y +SG    ARR+F+++  +K+ I W+ MI   A
Sbjct: 344 GKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALA 403

Query: 320 QTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVF 379
           Q     +AV LF  M +A V P++ T+V VL AC+    ++ G + +  +     ++   
Sbjct: 404 QHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEM 463

Query: 380 VSNALM-DVYAKCGRMENSVELFAESP-KRNHVTWNTMI 416
              A M D+ A+ G    + E     P + + + W +++
Sbjct: 464 SHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLL 502



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 70/313 (22%), Positives = 130/313 (41%), Gaps = 31/313 (9%)

Query: 28  LSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGN 87
           LSA A L   +        I  +   +NS      + +  ++  ++ A  I  Q ++   
Sbjct: 198 LSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETD- 256

Query: 88  CLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFST 147
            L++ +   LL  YVK+  +  A ++F  M  R+ +++   I GY  + +  EA+ LF +
Sbjct: 257 -LNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRS 315

Query: 148 LHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGC 207
           +   G E N +   A L V  S+   +    +     +   + ++ V  A+I  ++  G 
Sbjct: 316 MITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGS 375

Query: 208 VEFARKVFDGLFNDCF--------------------EEALNFFSQMRAVGFKPNNFTFAF 247
             +AR++FD +   C+                    EEA+  F +M   G +P+  T+  
Sbjct: 376 FPWARRMFDQV---CWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVG 432

Query: 248 VLKACLGLDTIRVAKSAHG---CALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
           VL AC     +   K  +       +   EM  Y    ++DL  ++G  S A+     MP
Sbjct: 433 VLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHY--ACMVDLLARAGLFSEAQEFIRRMP 490

Query: 305 -KKDVIPWSFMIA 316
            + D I W  +++
Sbjct: 491 VEPDAIAWGSLLS 503


>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
 gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
 gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 842

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 262/830 (31%), Positives = 422/830 (50%), Gaps = 68/830 (8%)

Query: 40  SNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLN 99
           + +TT P   + S+  + +  +SL++C   D+L+     H  + K+G   D+     L+ 
Sbjct: 17  TTTTTKPSLLNQSKC-TKATPSSLKNCKTIDELKM---FHRSLTKQGLDNDVSTITKLVA 72

Query: 100 VYVKLN---RLPDATKLFDEMPERNT-ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHEL 155
              +L     L  A ++F+      T   + + I+GY  S    EA+ LF  +   G   
Sbjct: 73  RSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISP 132

Query: 156 NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF 215
           + + F   L              +   + K+G+  + FV  +L+  ++ CG ++ ARKVF
Sbjct: 133 DKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVF 192

Query: 216 DGLFN----------------DCFEEALN-FFSQMRAVGFKPNNFTFAFVLKACLGLDTI 258
           D +                  D  ++A++ FF  +R     PN+ T   V+ AC  L+ +
Sbjct: 193 DEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDL 252

Query: 259 RVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARY 318
              +  +     +  E++  +  AL+D+Y K   I  A+R+F+E    ++   + M + Y
Sbjct: 253 ETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNY 312

Query: 319 AQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDV 378
            +  L+ +A+ +F  M  + V P++ + +S + +C+ +  +  G   H  V+R G  S  
Sbjct: 313 VRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWD 372

Query: 379 FVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE- 437
            + NAL+D+Y KC R + +  +F     +  VTWN+++ GYV+ GEV  A   F  M E 
Sbjct: 373 NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEK 432

Query: 438 -------------------------------EQVPATEVTYSSVLRACASLAALEPGMQV 466
                                          E V A  VT  S+  AC  L AL+    +
Sbjct: 433 NIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWI 492

Query: 467 HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLS 526
           +    K    +DV +   L+DM+++CG    A  +F+ + + +  +W A I   +M G +
Sbjct: 493 YYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNA 552

Query: 527 AEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTS 586
              +++FD M ++G +P+ + FVG L+ACS+GGL++QG+  F SM+  +G+ P   HY  
Sbjct: 553 ERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGC 612

Query: 587 MVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPED 646
           MV LLGRAG L++A +LIE +P +P+ +IW +LL AC +  NVE+   +A+ I    PE 
Sbjct: 613 MVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPER 672

Query: 647 EATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADM 695
             ++VLLSN+YA A  W           EK   K PG S I+ +G  H F +GD SH +M
Sbjct: 673 TGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEM 732

Query: 696 NIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSP 755
             I  ML+ ++ ++   G++PDLS VL DV E EK   L  HSEKLA+A+ L      + 
Sbjct: 733 PNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTT 792

Query: 756 IRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           IRI+KNLR+C DCH+  K  SK+  REII+RD +RFH+ + G CSCGDFW
Sbjct: 793 IRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842


>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 220/640 (34%), Positives = 346/640 (54%), Gaps = 37/640 (5%)

Query: 198 LIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRAVGFKPN 241
           L+  +  CG     +KVFD +                 N   E+A+  FS M+A G +PN
Sbjct: 128 LLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPN 187

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
           +  +  +L++CLG   + + K  H   ++     ++ V  A+ ++Y + G +  A+ +F+
Sbjct: 188 SAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFD 247

Query: 302 EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL 361
            M  ++ + W+ ++  Y Q      A+ELF RM    V  ++F F  VL+ C  +E  D+
Sbjct: 248 GMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDM 307

Query: 362 GNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQ 421
           G QIHS +V++G  S+V V   L+D Y KCG +E++   F    + N V+W+ +I G+ Q
Sbjct: 308 GRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQ 367

Query: 422 LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVV 481
            G +   + +F+ +  E V      Y+SV +ACA+ A L  G Q H   +K      +  
Sbjct: 368 SGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYG 427

Query: 482 ANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW 541
            +A++ MY+KCG +  AR  F+ +++ + V+W A+ISGY+ HG +AE L  F  MQ  G 
Sbjct: 428 ESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGV 487

Query: 542 RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAA 601
           RPN +TF+ VL+ACS+ GL+ + + Y  SM  +YG++P I+HY  M+    RAG L +A 
Sbjct: 488 RPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEAL 547

Query: 602 KLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMAR 661
           +LI  +PF+P  M W++LLG C  H ++++G+++A+++   +P D A ++LL N+Y+   
Sbjct: 548 ELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFG 607

Query: 662 SWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEW-----L 705
            WE+A             KE   SWI  +G VH F  GD  H     I   LE      +
Sbjct: 608 KWEEAGHVRKLMAERELKKEVSCSWISVKGQVHRFVVGDRHHPQTEAIYSKLEEFKCSVI 667

Query: 706 NMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRIC 765
           +   R      D+S  L   +E      L  HSEKLA+AF L     ++PI + KNLR C
Sbjct: 668 DSPVRLLNEEDDVSCSLSARKEQ-----LLDHSEKLAIAFGLISTEDNAPILVFKNLRAC 722

Query: 766 VDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            DCH   K +S +  R+I++RD  RFHHF+ G CSC D+W
Sbjct: 723 RDCHEFGKQVSMVTGRQIVVRDSTRFHHFKSGKCSCNDYW 762



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/486 (26%), Positives = 235/486 (48%), Gaps = 20/486 (4%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
           HSY    ++C +   L     IH ++ +          N LL +Y       D  K+FDE
Sbjct: 88  HSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDE 147

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
           M  +N +S+V  I  Y  + +  +A+ LFS +   G   N   + + L+  +   + EL 
Sbjct: 148 MLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELG 207

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDC-------------- 222
             + + V +   ++N  V TA+ + +  CG +E A+ VFDG+                  
Sbjct: 208 KQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQA 267

Query: 223 --FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
              E AL  F++M   G + + F F+ VLK C GL+   + +  H   +K   E ++ V 
Sbjct: 268 KKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVG 327

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
             L+D Y K G+I +A R F  + + + + WS +I+ ++Q+    D +++F  +R   V 
Sbjct: 328 TPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVV 387

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
            N F + SV QACA    L++G+Q H   ++ GL+S ++  +A++ +Y+KCGR++ +   
Sbjct: 388 LNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRA 447

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F    + + V W  +I GY   G   +A+  F +M    V    VT+ +VL AC+    +
Sbjct: 448 FESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLV 507

Query: 461 EPGMQVHCLTVKANYDMDVVVA--NALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMI 517
               Q +  ++  +Y +   +   + +ID Y++ G + +A  L+  M  + + +SW +++
Sbjct: 508 AEAKQ-YLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLL 566

Query: 518 SGYSMH 523
            G   H
Sbjct: 567 GGCWAH 572



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/412 (29%), Positives = 209/412 (50%), Gaps = 14/412 (3%)

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
            +EA +F  +M          ++  + +AC  L ++   +  H    +T       +   
Sbjct: 68  LKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENC 127

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           LL +Y   G   + +++F+EM  K+++ W  +I+ YA+      A+ LF  M+ + + PN
Sbjct: 128 LLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPN 187

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
              ++S+LQ+C     L+LG QIHS V+R  L +++ V  A+ ++Y +CG +E +  +F 
Sbjct: 188 SAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFD 247

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
               +N VTW  ++VGY Q  ++  A+ +F++M  E V   E  +S VL+ C  L   + 
Sbjct: 248 GMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDM 307

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G Q+H   VK   + +V V   L+D Y KCG I  A   F  +++ N+VSW+A+ISG+S 
Sbjct: 308 GRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQ 367

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS-----NGGLLEQGEAYFKSMVAN-YG 576
            G   + +K+F  ++  G   N+  +  V  AC+     N G    G+A  + +V+  YG
Sbjct: 368 SGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYG 427

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
                   ++MV++  + G LD A +  E I  +P  + W A++     H N
Sbjct: 428 -------ESAMVTMYSKCGRLDYARRAFESID-EPDAVAWTAIISGYAYHGN 471



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 191/383 (49%), Gaps = 20/383 (5%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           NS  Y + LQSC+    L+    IH  V++     ++     + N+YV+   L  A  +F
Sbjct: 187 NSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVF 246

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D M  +N +++   + GYT + +   A+ LF+ +  EG EL+ F F+  LKV   +   +
Sbjct: 247 DGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWD 306

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--NDC---------- 222
           +   + + + KLG +S   VGT L+D +  CG +E A + F  +   ND           
Sbjct: 307 MGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFS 366

Query: 223 ----FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                E+ +  F+ +R+ G   N+F +  V +AC     + +   AHG A+K      LY
Sbjct: 367 QSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLY 426

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
              A++ +Y+K G +  ARR FE + + D + W+ +I+ YA    + +A+  F RM+   
Sbjct: 427 GESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYG 486

Query: 339 VAPNQFTFVSVLQACATMEGL--DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
           V PN  TF++VL AC +  GL  +    + S+    G+   +   + ++D Y++ G ++ 
Sbjct: 487 VRPNAVTFIAVLTAC-SHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQE 545

Query: 397 SVELFAESP-KRNHVTWNTMIVG 418
           ++EL    P + + ++W +++ G
Sbjct: 546 ALELINRMPFEPDAMSWKSLLGG 568



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 134/298 (44%), Gaps = 25/298 (8%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E +   ++  L+ C   +D      IH  ++K G   ++     L++ YVK   +  A +
Sbjct: 286 ELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYR 345

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
            F  + E N +S+   I G++ S +  + + +F++L  EG  LN F +T+  +   +   
Sbjct: 346 SFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQAN 405

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------------- 218
             +         K G  S  +  +A++  +S CG +++AR+ F+ +              
Sbjct: 406 LNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISG 465

Query: 219 --FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY--- 273
             ++    EAL FF +M++ G +PN  TF  VL AC     +  AK   G ++   Y   
Sbjct: 466 YAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLG-SMSRDYGVK 524

Query: 274 -EMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIAR-YAQTDLSIDAV 328
             +D Y    ++D Y+++G +  A  +   MP + D + W  ++   +A  DL +  +
Sbjct: 525 PTIDHY--DCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKI 580


>gi|7413540|emb|CAB86020.1| putative protein [Arabidopsis thaliana]
 gi|9758453|dbj|BAB08982.1| selenium-binding protein-like [Arabidopsis thaliana]
          Length = 864

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 210/554 (37%), Positives = 334/554 (60%), Gaps = 11/554 (1%)

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
           +L+ C     +  AK+ HG  ++   E D+ +   L++ Y+K G +  AR++F+ M ++ 
Sbjct: 59  ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 118

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
           ++ W+ MI  Y +  +  +A+++F  MR      ++FT  SVL AC          ++H 
Sbjct: 119 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 178

Query: 368 LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK 427
           L V+  +  +++V  AL+D+YAKCG ++++V++F     ++ VTW++M+ GYVQ     +
Sbjct: 179 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 238

Query: 428 AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALID 487
           A++++ +     +   + T SSV+ AC++LAAL  G Q+H +  K+ +  +V VA++ +D
Sbjct: 239 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 298

Query: 488 MYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLT 547
           MYAKCGS+ ++ ++F  + + N   WN +ISG++ H    EV+ +F+ MQQ G  PN +T
Sbjct: 299 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 358

Query: 548 FVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGI 607
           F  +LS C + GL+E+G  +FK M   YG+ P + HY+ MV +LGRAG L +A +LI+ I
Sbjct: 359 FSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI 418

Query: 608 PFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA 667
           PF P+  IW +LL +C ++ N+E+  ++A+ + + EPE+   HVLLSNIYA  + WE+ A
Sbjct: 419 PFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIA 478

Query: 668 -----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIP 716
                       K  G SWI+ +  VH F  G++ H  +  I   L+ L +K RK GY P
Sbjct: 479 KSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKP 538

Query: 717 DLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIIS 776
            +   L DV   +KE  L  HSEKLAL F L  +P SSP+RI+KNLRICVDCH  +K  S
Sbjct: 539 SVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAAS 598

Query: 777 KIVQREIIIRDVHR 790
              +R II+RDV+R
Sbjct: 599 MATRRFIIVRDVNR 612



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/411 (26%), Positives = 195/411 (47%), Gaps = 22/411 (5%)

Query: 12  CKQLTHQSKINAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDD 71
           CK L  +S  ++  R +S  A+   ++ S     P  +S    N +     LQ C +N  
Sbjct: 14  CKVLPRRSNTSSLSRNISVLASYDQEEVS-----PGRYSNEFSNRNLVHEILQLCARNGA 68

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
           +  A   H ++++     D+   NVL+N Y K   +  A ++FD M ER+ +S+ T I  
Sbjct: 69  VMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGL 128

Query: 132 YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSN 191
           YT +    EA+ +F  +  EG + + F  ++ L        A  C  +     K   D N
Sbjct: 129 YTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLN 188

Query: 192 AFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRA 235
            +VGTAL+D ++ CG ++ A +VF+ +                 N  +EEAL  + + + 
Sbjct: 189 LYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQR 248

Query: 236 VGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISN 295
           +  + N FT + V+ AC  L  +   K  H    K+ +  +++VA + +D+Y K G +  
Sbjct: 249 MSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRE 308

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACAT 355
           +  IF E+ +K++  W+ +I+ +A+     + + LF +M+Q  + PN+ TF S+L  C  
Sbjct: 309 SYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGH 368

Query: 356 MEGLDLGNQIHSLV-VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
              ++ G +   L+    GL  +V   + ++D+  + G +  + EL    P
Sbjct: 369 TGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIP 419


>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 580

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 213/529 (40%), Positives = 316/529 (59%), Gaps = 11/529 (2%)

Query: 288 TKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFV 347
           T SG ++ A RIF      ++  W+ +I  Y+ +D  I A+ L+  M    ++PN +TF 
Sbjct: 52  TLSGHVAYAHRIFSCTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFG 111

Query: 348 SVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKR 407
            VL+AC  +  L  G ++HS +V+VGL  +  + N L+ +YA CG M+ +  +F E P+ 
Sbjct: 112 FVLKACCKLLRLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEP 171

Query: 408 NHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVH 467
           +  +W+TM+ GY Q G+  +A+ +F +M  E V +   T +SV+  C  L AL+ G  VH
Sbjct: 172 DSASWSTMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVH 231

Query: 468 CLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSA 527
               K    +DVV+  AL+ MY+KCGS+ +A  VF  M + +  +W+ MI+GY++HG   
Sbjct: 232 SYMDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGE 291

Query: 528 EVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSM 587
           + L++FD M++    PN +TF  VLSACS+ GL+E+G   F++M   Y I P I+HY  M
Sbjct: 292 KALQLFDAMKRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCM 351

Query: 588 VSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDE 647
           V L  RAG +  A K I+ +P +P+V++WR LLGAC  H   ++G   ++ IL  +P   
Sbjct: 352 VDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSSP 411

Query: 648 ATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMN 696
             +VL+SN+YA    W           +KA  K+ G S IE   MVH F  GD SH +  
Sbjct: 412 ENYVLVSNVYASLGRWSSVCQVRSLMKDKAPKKQHGWSSIEINFMVHKFIMGDESHPERE 471

Query: 697 IIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPI 756
            I GML  +  K ++ G++     VL D+ E+EKE  L +HSE+LA+A+ L   P  SPI
Sbjct: 472 KIYGMLHQMARKLKQVGHVNSTVDVLHDIDEEEKEYALGLHSERLAIAYGLLHTPNGSPI 531

Query: 757 RIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           RI+KNLR+C DCH  IK+IS++  REII+RD  RFHHF++  CSC D+W
Sbjct: 532 RIVKNLRVCRDCHEVIKLISEVYNREIIVRDRVRFHHFRERGCSCNDYW 580



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 174/349 (49%), Gaps = 23/349 (6%)

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGF 238
           +F+C     H  N F+   +I  +S+               +D    A+  +  M   G 
Sbjct: 63  IFSCT----HHPNLFMWNTIIRGYSI---------------SDSPITAIALYRDMFLCGI 103

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
            PN++TF FVLKAC  L  +   +  H   +K   + +  +   L+ LY   G +  A  
Sbjct: 104 SPNSYTFGFVLKACCKLLRLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACV 163

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           +F+EMP+ D   WS M++ YAQ   +++A++LF  M+   V+ + FT  SV+  C  +  
Sbjct: 164 MFDEMPEPDSASWSTMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGA 223

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           LDLG  +HS + + G+  DV +  AL+ +Y+KCG ++N++++F    +R+   W+TMI G
Sbjct: 224 LDLGKWVHSYMDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAG 283

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           Y   G   KA+ +F  M   +     VT++SVL AC+    +E G Q+   T+   Y + 
Sbjct: 284 YAIHGHGEKALQLFDAMKRSKTIPNCVTFTSVLSACSHSGLVEKGHQIF-ETMWTEYKIT 342

Query: 479 VVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHG 524
             + +   ++D++ + G +  A + +  M  + N V W  ++     HG
Sbjct: 343 PQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHG 391



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 114/459 (24%), Positives = 187/459 (40%), Gaps = 104/459 (22%)

Query: 5   FNYKTFSCKQLTHQSKINAW---LRGLSAQAALSTQQCSNSTTTPITFSVSEF------N 55
           + ++ FSC   TH   +  W   +RG S          S+S  T I      F      N
Sbjct: 59  YAHRIFSC---THHPNLFMWNTIIRGYSI---------SDSPITAIALYRDMFLCGISPN 106

Query: 56  SHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFD 115
           S+++   L++C +   L     +H Q++K G   +    N L+ +Y     +  A  +FD
Sbjct: 107 SYTFGFVLKACCKLLRLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFD 166

Query: 116 EMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAEL 175
           EMPE ++ S+ T + GY  + Q VEA+ LF  +  E    + F   + + V   +G  +L
Sbjct: 167 EMPEPDSASWSTMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDL 226

Query: 176 CPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------F 219
              V + + K G   +  +GTAL+  +S CG ++ A KVF G+                 
Sbjct: 227 GKWVHSYMDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAI 286

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           +   E+AL  F  M+     PN  TF  VL AC                           
Sbjct: 287 HGHGEKALQLFDAMKRSKTIPNCVTFTSVLSAC--------------------------- 319

Query: 280 AVALLDLYTKSGEISNARRIFEEM-PKKDVIPWSFMIARYAQTDLSIDAVELFCR----- 333
                   + SG +    +IFE M  +  + P    I  Y         V+LFCR     
Sbjct: 320 --------SHSGLVEKGHQIFETMWTEYKITP---QIKHYGCM------VDLFCRAGMVG 362

Query: 334 -----MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD---VFVSNALM 385
                ++   + PN   + ++L AC T    DLG  I   ++++   S    V VSN   
Sbjct: 363 HAHKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSSPENYVLVSN--- 419

Query: 386 DVYAKCGRMENSVELFA----ESPKRNHVTWNTMIVGYV 420
            VYA  GR  +  ++ +    ++PK+ H  W+++ + ++
Sbjct: 420 -VYASLGRWSSVCQVRSLMKDKAPKKQH-GWSSIEINFM 456


>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
 gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 216/512 (42%), Positives = 305/512 (59%), Gaps = 13/512 (2%)

Query: 307 DVIPWSFMIARYAQTDLSI-DAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
           D   +S +I  YA++  S  +A+  +  M    ++PN++ F  VL+ACA +  L+LG  +
Sbjct: 72  DAFLFSTIIRAYAESSQSKHNAIFYYNLMLGYGISPNKYAFPFVLKACAGLRDLNLGKAV 131

Query: 366 HSLVVRVGLLSDVFVSNALMDVYAKC-GRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
           H  +V+ G   D+FV N ++ +Y  C G ME + +LF E PK + VTW  MI GY +LG+
Sbjct: 132 HGSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKLDPVTWTAMIGGYARLGQ 191

Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA 484
              A+ +F KM    V   +VT  SVL AC  L ALE G  +     K      V ++NA
Sbjct: 192 SAGAVGLFRKMQIAGVCPDDVTMVSVLSACTDLGALELGKWIESYIEKERVLKTVELSNA 251

Query: 485 LIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPN 544
           L+DM+AKCG +  A  +F  M+    VSW ++I G +MHG   E + +F+ M+  G  P 
Sbjct: 252 LVDMFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVPE 311

Query: 545 NLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLI 604
           ++ F+G+LSACS+ GL+E+G  YF  M   +GI P IEHY  MV LL RAG + +A + +
Sbjct: 312 DIAFIGLLSACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEFV 371

Query: 605 EGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE 664
           E +P +P+ +IWR L+ AC +H  +++G   ++ ++  EP  E+ +VLLSNIY     WE
Sbjct: 372 ERMPIEPNPIIWRTLISACRVHGELKLGESISKQLIRNEPMHESNYVLLSNIYGKMLDWE 431

Query: 665 KAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAG 713
           K +            K PG + IE    +H F  GD SH   N I  M+  +  + ++AG
Sbjct: 432 KKSKIRVAMGKKGIQKVPGSTMIELDNEIHEFIVGDRSHNQYNEIIKMVNEMGREMKRAG 491

Query: 714 YIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIK 773
           Y P  + V  D+ E++KE  L  HSEKLA+AFAL   PP SPIRI KNLR+C DCH+A K
Sbjct: 492 YAPTTTEVFLDIDEEDKEDALSRHSEKLAIAFALLNTPPGSPIRITKNLRVCGDCHSASK 551

Query: 774 IISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            ISKI  REI++RD  RFHHF+DG CSCGDFW
Sbjct: 552 FISKIYNREIVMRDRSRFHHFRDGQCSCGDFW 583



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 184/365 (50%), Gaps = 23/365 (6%)

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARK----VFDGLFNDCF--------------- 223
           + KLG  +N  V T    A S    + +A      V D    D F               
Sbjct: 30  IIKLGFQNNPLVLTKFTSASSNLDAIPYAMSLVFSVEDARVYDAFLFSTIIRAYAESSQS 89

Query: 224 -EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
              A+ +++ M   G  PN + F FVLKAC GL  + + K+ HG  +K  ++ D++V   
Sbjct: 90  KHNAIFYYNLMLGYGISPNKYAFPFVLKACAGLRDLNLGKAVHGSLVKFGFDDDIFVQNT 149

Query: 283 LLDLYTK-SGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           ++ +Y   SG +  AR++F+EMPK D + W+ MI  YA+   S  AV LF +M+ A V P
Sbjct: 150 MVHMYCCCSGGMEFARKLFDEMPKLDPVTWTAMIGGYARLGQSAGAVGLFRKMQIAGVCP 209

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           +  T VSVL AC  +  L+LG  I S + +  +L  V +SNAL+D++AKCG ++ ++ LF
Sbjct: 210 DDVTMVSVLSACTDLGALELGKWIESYIEKERVLKTVELSNALVDMFAKCGDVDKALGLF 269

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
               KR  V+W ++IVG    G   +A+ +F +M    +   ++ +  +L AC+    +E
Sbjct: 270 RNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVPEDIAFIGLLSACSHSGLVE 329

Query: 462 PGMQVHC-LTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISG 519
            G Q    +T +      +     ++D+ ++ G +T+A   V  M  + N + W  +IS 
Sbjct: 330 RGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERMPIEPNPIIWRTLISA 389

Query: 520 YSMHG 524
             +HG
Sbjct: 390 CRVHG 394



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 100/413 (24%), Positives = 176/413 (42%), Gaps = 37/413 (8%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF---DEMPE 119
           LQ+C   + L     +H  ++K G   +        +    L+ +P A  L    ++   
Sbjct: 14  LQAC---NTLPKLAQLHTHIIKLGFQNNPLVLTKFTSASSNLDAIPYAMSLVFSVEDARV 70

Query: 120 RNTISFVTTIQGYTVSSQFVE-AVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
            +   F T I+ Y  SSQ    A+  ++ +   G   N +AF   LK    +    L   
Sbjct: 71  YDAFLFSTIIRAYAESSQSKHNAIFYYNLMLGYGISPNKYAFPFVLKACAGLRDLNLGKA 130

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVC-GCVEFARKVFD--------------GLFNDCF 223
           V   + K G D + FV   ++  +  C G +EFARK+FD              G +    
Sbjct: 131 VHGSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKLDPVTWTAMIGGYARLG 190

Query: 224 EE--ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
           +   A+  F +M+  G  P++ T   VL AC  L  + + K       K      + ++ 
Sbjct: 191 QSAGAVGLFRKMQIAGVCPDDVTMVSVLSACTDLGALELGKWIESYIEKERVLKTVELSN 250

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           AL+D++ K G++  A  +F  M K+ ++ W+ +I   A     ++AV LF  M+ + + P
Sbjct: 251 ALVDMFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVP 310

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVR-VGLLSDVFVSNALMDVYAKCGRMENSVEL 400
               F+ +L AC+    ++ G Q  S + R  G++  +     ++D+ ++ G +  ++E 
Sbjct: 311 EDIAFIGLLSACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEF 370

Query: 401 FAESP-KRNHVTWNTMIV-----GYVQLGEVGKAMIMFSKMLEEQVPATEVTY 447
               P + N + W T+I      G ++LGE        SK L    P  E  Y
Sbjct: 371 VERMPIEPNPIIWRTLISACRVHGELKLGES------ISKQLIRNEPMHESNY 417



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 77/339 (22%), Positives = 136/339 (40%), Gaps = 60/339 (17%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNR-LPDATKL 113
           N +++   L++C    DL     +H  ++K G   D+F  N ++++Y   +  +  A KL
Sbjct: 108 NKYAFPFVLKACAGLRDLNLGKAVHGSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFARKL 167

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           FDEMP+ + +++   I GY    Q   AVGLF  +   G   +     + L     +G  
Sbjct: 168 FDEMPKLDPVTWTAMIGGYARLGQSAGAVGLFRKMQIAGVCPDDVTMVSVLSACTDLGAL 227

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFE--------- 224
           EL   + + + K        +  AL+D F+ CG V+ A  +F  +               
Sbjct: 228 ELGKWIESYIEKERVLKTVELSNALVDMFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGL 287

Query: 225 -------EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
                  EA++ F +M+A G  P +  F  +L AC                         
Sbjct: 288 AMHGRGLEAVSLFEEMKASGMVPEDIAFIGLLSAC------------------------- 322

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKK-DVIP----WSFMIARYAQTDLSIDAVELFC 332
                     + SG +   R+ F EM ++  ++P    +  M+   ++  L  +A+E   
Sbjct: 323 ----------SHSGLVERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVE 372

Query: 333 RMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR 371
           RM    + PN   + +++ AC     L LG  I   ++R
Sbjct: 373 RMP---IEPNPIIWRTLISACRVHGELKLGESISKQLIR 408


>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
          Length = 987

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 267/833 (32%), Positives = 405/833 (48%), Gaps = 143/833 (17%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVY--VKLNR--LPDATKLF 114
           YA  LQ C    +      IH   +K G  +  +  N LL  Y  V ++R    +A  LF
Sbjct: 212 YARLLQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLF 271

Query: 115 DEMP--ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           D++P   RN  ++ + +  Y  S +  +A  +F+ +                        
Sbjct: 272 DDIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMP----------------------- 308

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQ 232
                           D +A   T +I   +  G                F +A+  F  
Sbjct: 309 ----------------DRDAVSWTIMIVGLNRSGR---------------FWDAVKTFLD 337

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           M + GF P+ FT   VL +C  ++   V +  H   +K      + VA ++L +Y K G+
Sbjct: 338 MVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGD 397

Query: 293 ISNARRIFEEMP-------------------------------KKDVIPWSFMIARYAQT 321
              AR +FE M                                ++ ++ W+ +IA Y Q 
Sbjct: 398 AETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQN 457

Query: 322 DLSIDAVELFCRMRQAF-VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFV 380
            L   A++ F RM  A  + P+ FT  SVL ACA +  L +G Q+HS ++R G+     +
Sbjct: 458 GLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQI 517

Query: 381 SNALMDVYAKCGRME---------------------------------NSVELFAESPKR 407
            NAL+  YAK G +E                                  + E+F     R
Sbjct: 518 MNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNR 577

Query: 408 NHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVH 467
           + + W  MIVGY Q G+  +AM +F  M+         T ++VL ACASLA L+ G Q+H
Sbjct: 578 DVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIH 637

Query: 468 CLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE--VSWNAMISGYSMHGL 525
           C  +++  +  V V+NA+I +YA+ GS+  AR VFD +  W +  ++W +MI   + HGL
Sbjct: 638 CKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQIC-WRKETITWTSMIVAMAQHGL 696

Query: 526 SAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYT 585
             + + +F+ M + G +P+++T+VGVLSAC++ G +++G+ Y++ M   +GI P + HY 
Sbjct: 697 GEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYA 756

Query: 586 SMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPE 645
            MV L  RAG L +A + I+ +P  P  ++W +LL AC +  N ++  L+A  +L  +P 
Sbjct: 757 CMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPH 816

Query: 646 DEATHVLLSNIYAM-------ARSW----EKAASKEPGLSWIENQGMVHYFRAGDTSHAD 694
           +   +  L+N+Y+        AR W    +K   KE G SW   +G VH F A D  H  
Sbjct: 817 NSGAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGADDVLHPQ 876

Query: 695 MN-IIRGMLE-WLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPP 752
            + I R   E W  +K  KAG++PDL++VL DV ++ KE  L  HSEKLA+AF L   P 
Sbjct: 877 RDSIYRKAAEMWEEIK--KAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPE 934

Query: 753 SSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            + +RI+KNLR+C DCHTAIK ISK V REII+RD  RFHHF+DG CSC D+W
Sbjct: 935 KTTLRIMKNLRVCNDCHTAIKFISKFVDREIIVRDATRFHHFRDGYCSCKDYW 987



 Score = 46.2 bits (108), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 1/123 (0%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E NSH+ A  L +C     L     IHC+ ++      +  +N ++ VY +   +P A +
Sbjct: 611 EPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARR 670

Query: 113 LFDEMPERN-TISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
           +FD++  R  TI++ + I          +AV LF  + R G + +   +   L      G
Sbjct: 671 VFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAG 730

Query: 172 WAE 174
           + +
Sbjct: 731 FVD 733


>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
 gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
          Length = 582

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 227/585 (38%), Positives = 324/585 (55%), Gaps = 23/585 (3%)

Query: 237 GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNA 296
           G  PN FTF F +K+C  L      K  H    KT   ++ +V  +L+ +Y K   I NA
Sbjct: 5   GASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSLIDNA 64

Query: 297 RRIFEEMP--KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
           R++F+E P  +K  + ++ +++ YA      D V LFC MR+  V  N  T + ++Q C 
Sbjct: 65  RKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCG 124

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
               L LG  +H   V+ GL  D  V N L+ +Y K G ++   +LF E P++  +TWN 
Sbjct: 125 IPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNA 184

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
           MI GY Q G     + ++ +M  +      +T   VL +CA L AL  G +V        
Sbjct: 185 MINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFG 244

Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
           +  +  + NAL++MYA+CG++  AR +FD M   + VSW A+I GY MHG     + +FD
Sbjct: 245 FSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFD 304

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
            M + G +P+   FV VLSACS+ GL  +G  YF  M   YG+ P  EHY+ MV LLGRA
Sbjct: 305 EMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRA 364

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLS 654
           G L++A +LIE +  +    +W ALLGAC IH NVE+  L+ + +++ EP +   +VLLS
Sbjct: 365 GRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQVIELEPTNTGYYVLLS 424

Query: 655 NIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLE 703
           N+Y  A + E           +   K+PG S++E +G VH F AGD +H   N I   L 
Sbjct: 425 NVYTEAGNLEGILRVRMLMRKRKLKKDPGCSYVEFKGRVHLFFAGDRNHPQTNEIYKKLN 484

Query: 704 WLNMKSRKAGYIPDLSAVLRDVREDEKERYL---WVHSEKLALAFALFKMPPSSPIRIIK 760
            L         + DL    ++  E  +E YL    VHSEKLA+AFAL      + I IIK
Sbjct: 485 ELE------NLVKDLDGCKKNDHE-RREEYLNSMGVHSEKLAVAFALLNTRKETEIIIIK 537

Query: 761 NLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           NLRIC DCH  IK++SKIV R+ ++RD  RFHHF++G CSC ++W
Sbjct: 538 NLRICGDCHLFIKLVSKIVDRQFVVRDATRFHHFKNGFCSCKEYW 582



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 167/300 (55%), Gaps = 4/300 (1%)

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           M ++  +PN FTF   +++CA +     G Q+H  V + G L + FV  +L+ +Y KC  
Sbjct: 1   MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60

Query: 394 MENSVELFAESPKRNHVT--WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVL 451
           ++N+ +LF E+P+   +T  +N+++ GY     V   +++F +M E  V    VT   ++
Sbjct: 61  IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLV 120

Query: 452 RACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEV 511
           + C     L  GM VH   VK   DMD  V N L+ MY K G I   R +FD M     +
Sbjct: 121 QPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLI 180

Query: 512 SWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSM 571
           +WNAMI+GY+ +GL+  VL+++  M+ +G+ P+ LT VGVLS+C++ G L  G+   + M
Sbjct: 181 TWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKM 240

Query: 572 VANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEI 631
              +G         ++V++  R G+L KA  + +G+P + SV+ W A++G   +H   E+
Sbjct: 241 -EGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVK-SVVSWTAIIGGYGMHGQGEV 298



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 184/394 (46%), Gaps = 20/394 (5%)

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
           R G   N F F   +K   ++        +   V+K G     FV T+LI  +  C  ++
Sbjct: 3   RSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSLID 62

Query: 210 FARKVFDG------------------LFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKA 251
            ARK+FD                     N   ++ +  F +MR +G + N  T   +++ 
Sbjct: 63  NARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQP 122

Query: 252 CLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPW 311
           C     + +    HG  +K   +MD  V   LL +Y KSGEI   R++F+EMP+K +I W
Sbjct: 123 CGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITW 182

Query: 312 SFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR 371
           + MI  YAQ  L+ + +EL+  M      P+  T V VL +CA +  L +G ++   +  
Sbjct: 183 NAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEG 242

Query: 372 VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIM 431
            G  S+ F++NAL+++YA+CG ++ + ++F   P ++ V+W  +I GY   G+   A+ +
Sbjct: 243 FGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGL 302

Query: 432 FSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ-VHCLTVKANYDMDVVVANALIDMYA 490
           F +M+   +      + SVL AC+       G+     +  K          + ++D+  
Sbjct: 303 FDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLG 362

Query: 491 KCGSITDAR-LVFDMMNDWNEVSWNAMISGYSMH 523
           + G + +AR L+  M    +   W A++    +H
Sbjct: 363 RAGRLNEARELIESMQVRADGALWGALLGACKIH 396



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 114/447 (25%), Positives = 192/447 (42%), Gaps = 27/447 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N+ ++  +++SC       T   +HC V K G  L+ F    L+++Y K + + +A KLF
Sbjct: 9   NAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSLIDNARKLF 68

Query: 115 DEMPERN--TISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           DE P+    T+ + + + GY ++S+  + V LF  +   G E+N       ++     G 
Sbjct: 69  DENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIPGN 128

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-----GLF-------- 219
             L  CV     K G D ++ VG  L+  +   G ++  RK+FD     GL         
Sbjct: 129 LGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMING 188

Query: 220 ---NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
              N      L  + +M + GF P+  T   VL +C  L  + V K          +  +
Sbjct: 189 YAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSN 248

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
            ++  AL+++Y + G +  AR IF+ MP K V+ W+ +I  Y        AV LF  M +
Sbjct: 249 PFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIR 308

Query: 337 AFVAPNQFTFVSVLQACA----TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCG 392
             + P+   FVSVL AC+    T +GLD    +     + GL       + ++D+  + G
Sbjct: 309 GGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMER---KYGLRPGAEHYSCMVDLLGRAG 365

Query: 393 RMENSVELFAESPKR-NHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVL 451
           R+  + EL      R +   W  ++        V  A + F +++E + P     Y  + 
Sbjct: 366 RLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQVIELE-PTNTGYYVLLS 424

Query: 452 RACASLAALEPGMQVHCLTVKANYDMD 478
                   LE  ++V  L  K     D
Sbjct: 425 NVYTEAGNLEGILRVRMLMRKRKLKKD 451



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 120/288 (41%), Gaps = 30/288 (10%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N  +    +Q C    +L   M +H   +K G  +D    N LL +YVK   +    K
Sbjct: 110 EINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRK 169

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           LFDEMP +  I++   I GY  +      + L+  +  +G   +P      L     +G 
Sbjct: 170 LFDEMPRKGLITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGA 229

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------------- 218
             +   V   +   G  SN F+  AL++ ++ CG ++ AR +FDG+              
Sbjct: 230 LSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGG 289

Query: 219 --FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKAC-------LGLDTIRVAKSAHGCAL 269
              +   E A+  F +M   G KP+   F  VL AC        GLD   V +  +G  L
Sbjct: 290 YGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYG--L 347

Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
           +   E        ++DL  ++G ++ AR + E M  + D   W  ++ 
Sbjct: 348 RPGAEH----YSCMVDLLGRAGRLNEARELIESMQVRADGALWGALLG 391


>gi|356537359|ref|XP_003537195.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g13770, mitochondrial-like
           [Glycine max]
          Length = 600

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 224/586 (38%), Positives = 345/586 (58%), Gaps = 14/586 (2%)

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
           QM   G   N   +  VL  C+     +  +  H   +KT Y   +Y+   L+  YTK  
Sbjct: 16  QMTLXGLDMNLQDYNTVLNECVSKRAFKEGQRVHAHTIKTHYLPCVYLWTRLIVFYTKCD 75

Query: 292 EISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQ 351
            + +AR +  EMP+++V+ W+ MI+ Y+Q   +  A+ +  ++ ++    N+FTF ++  
Sbjct: 76  SLGDARHVLNEMPERNVVSWTAMISAYSQRGYASQALSILVQILRSGTESNEFTFATMPY 135

Query: 352 ACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
                 G  L   IHSL++++   + V+V ++L+D+YAK G++  +  +F   P+R+ V+
Sbjct: 136 FMYRFLGFCLREAIHSLIIKLNFKAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVS 195

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
              +I GY QL ++ + + +F ++  E + +  VTY+SVL A + LAAL+ G QVH   +
Sbjct: 196 CTAIISGYAQL-DLDEELELFLRLQREGMXSNYVTYTSVLTALSGLAALDHGKQVHNHLL 254

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
            +     V++ N+LIDMY+KCG++T AR +FD M +   +SWNAM+ GYS HG   EVL+
Sbjct: 255 CSEVPSFVILQNSLIDMYSKCGNLTYARRIFDTMRERTVISWNAMLVGYSKHGERREVLE 314

Query: 532 VFDLMQ-QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA-NYGIEPCIEHYTSMVS 589
           +F+LM+ +   +P+++T + VLS CS+GG  ++G   F  M +    ++P  + Y  +V 
Sbjct: 315 LFNLMRDENKVKPDSVTVLAVLSGCSHGGQEDKGMDIFYDMTSGKISVQPDTKRYGCVVD 374

Query: 590 LLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEAT 649
           LLGRAG +++A + I+ IPF+PS  I   LLGAC +H+N+ IG      +L+FEPE+   
Sbjct: 375 LLGRAGRVEEAFEFIKKIPFEPSAAICGCLLGACSVHSNLGIGEFVGHRLLEFEPENAGN 434

Query: 650 HVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNII 698
           +V+LSN+YA A  WE           KA +KEPG S IE   ++  F   D SH     +
Sbjct: 435 YVILSNLYASAGRWEDVTSLRNLMLKKAVTKEPGRSLIEVDQVLQTFHPSDCSHPRREEV 494

Query: 699 RGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRI 758
               + L ++ ++AGY PDLS VL DV E++KE+ L  HSEKLAL+F L   P S  I +
Sbjct: 495 SAKXQELLVRFKEAGYFPDLSCVLHDVDEEQKEKILLSHSEKLALSFGLIATPESVLICV 554

Query: 759 IKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
           IKNLRICVDCH   K ISKI  RE+ +RD + FH      CSCGD+
Sbjct: 555 IKNLRICVDCHNFAKYISKIYSREVSLRDKNWFHGIVGEKCSCGDY 600



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 170/379 (44%), Gaps = 22/379 (5%)

Query: 47  ITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNR 106
           +T    + N   Y T L  C+     +    +H   +K      ++    L+  Y K + 
Sbjct: 17  MTLXGLDMNLQDYNTVLNECVSKRAFKEGQRVHAHTIKTHYLPCVYLWTRLIVFYTKCDS 76

Query: 107 LPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV 166
           L DA  + +EMPERN +S+   I  Y+      +A+ +   + R G E N F F      
Sbjct: 77  LGDARHVLNEMPERNVVSWTAMISAYSQRGYASQALSILVQILRSGTESNEFTFATMPYF 136

Query: 167 LVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------- 216
           +       L   + + + KL   ++ +VG++L+D ++  G +  AR +F+          
Sbjct: 137 MYRFLGFCLREAIHSLIIKLNFKAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSC 196

Query: 217 -----GLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT 271
                G      +E L  F +++  G   N  T+  VL A  GL  +   K  H   L  
Sbjct: 197 TAIISGYAQLDLDEELELFLRLQREGMXSNYVTYTSVLTALSGLAALDHGKQVHNHLL-- 254

Query: 272 CYEMDLYVAV--ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVE 329
           C E+  +V +  +L+D+Y+K G ++ ARRIF+ M ++ VI W+ M+  Y++     + +E
Sbjct: 255 CSEVPSFVILQNSLIDMYSKCGNLTYARRIFDTMRERTVISWNAMLVGYSKHGERREVLE 314

Query: 330 LFCRMR-QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV--RVGLLSDVFVSNALMD 386
           LF  MR +  V P+  T ++VL  C+     D G  I   +   ++ +  D      ++D
Sbjct: 315 LFNLMRDENKVKPDSVTVLAVLSGCSHGGQEDKGMDIFYDMTSGKISVQPDTKRYGCVVD 374

Query: 387 VYAKCGRMENSVELFAESP 405
           +  + GR+E + E   + P
Sbjct: 375 LLGRAGRVEEAFEFIKKIP 393


>gi|297734415|emb|CBI15662.3| unnamed protein product [Vitis vinifera]
          Length = 657

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 219/589 (37%), Positives = 342/589 (58%), Gaps = 38/589 (6%)

Query: 218 LFNDCFEEALNFFSQMRAVG-FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
           +F   + EAL  F  +   G +  ++ T+  ++ AC+GL +IR  K      + +  + D
Sbjct: 106 VFFKRYHEALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPD 165

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
            Y+   +L ++ K G + +ARR+F+EMP+K+++ W+ +I          +A  LF  M Q
Sbjct: 166 EYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQ 225

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
            F       FV++++A A +  +  G Q+HS  ++ G+  DVFV+ AL+D+Y+KCG +E+
Sbjct: 226 DFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIED 285

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           +  +F + P++  V WN++I GY   G   +A+ M+ +M +  V     T+S ++R CA 
Sbjct: 286 AQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICAR 345

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           LA+LE   Q H   V+  + +D+V   AL+D+Y+K G I DA+ VFDMM   N +SWNA+
Sbjct: 346 LASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNAL 405

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           I+GY  HG   E +++F+ M   G  PN++TF+ VLSACS  GL ++G   F+SM  ++ 
Sbjct: 406 IAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHK 465

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
           I+P   HY  M+ LLGR G LD+A  LI+  PF+P+V +W ALL AC +H N E+G+ +A
Sbjct: 466 IKPRAMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAA 525

Query: 637 QHILDFEPEDEATHVLLSNIYAMARSWEKAASKEPGLSWIENQGMVHYFRAGDTSHADMN 696
           + +    PE  + +V+L NIY  +   E+AA+                            
Sbjct: 526 EKLYGMGPEKLSNYVVLLNIYNRSGRLEEAAA---------------------------- 557

Query: 697 IIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPI 756
                   L ++  K GY+P    +L DV E E ER L  HSEKLA+AF L      +P+
Sbjct: 558 --------LMLEISKHGYVPQDKFLLPDVDEQE-ERVLLYHSEKLAIAFGLINTSDWTPL 608

Query: 757 RIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +I+++ RIC DCH+AIK+I+ + +REI++RD  RFHHF+DG CSCGD+W
Sbjct: 609 QIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 657



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 192/383 (50%), Gaps = 18/383 (4%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           + +S +Y   + +CI    ++    +   ++  G   D +  N +L ++VK   + DA +
Sbjct: 128 DMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARR 187

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           LFDEMPE+N +S+ T I G   +  + EA  LF  + ++  +     F   ++    +G 
Sbjct: 188 LFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGL 247

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------------- 218
                 + +C  K G   + FV  ALID +S CG +E A+ VFD +              
Sbjct: 248 IFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAG 307

Query: 219 --FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
              +   EEAL+ + +MR  G K +NFTF+ +++ C  L ++  AK AH   ++  + +D
Sbjct: 308 YALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLD 367

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           +    AL+DLY+K G I +A+ +F+ MP K+VI W+ +IA Y      ++AVE+F RM  
Sbjct: 368 IVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLH 427

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALM-DVYAKCGRME 395
             + PN  TF++VL AC+     D G +I   + R   +    +  A M ++  + G ++
Sbjct: 428 EGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLD 487

Query: 396 NSVELFAESPKRNHVT-WNTMIV 417
            +  L  ++P +  V  W  ++ 
Sbjct: 488 EAFALIKDAPFKPTVNMWAALLT 510



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 86/363 (23%), Positives = 149/363 (41%), Gaps = 64/363 (17%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           +H   LK G   D+F    L+++Y K   + DA  +FD+MPE+ T+ + + I GY +   
Sbjct: 254 LHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGY 313

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
             EA+ ++  +   G +++ F F+  +++   +   E      A + + G   +    TA
Sbjct: 314 SEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTA 373

Query: 198 LIDAFSVCGCVEFARKVFDGL-------FNDCFE---------EALNFFSQMRAVGFKPN 241
           L+D +S  G +E A+ VFD +       +N             EA+  F +M   G  PN
Sbjct: 374 LVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPN 433

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
           + TF  VL AC                                   + SG       IFE
Sbjct: 434 HVTFLAVLSAC-----------------------------------SYSGLSDRGWEIFE 458

Query: 302 EMPKKDVIP-----WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM 356
            M +   I      ++ MI    +  L +D  E F  ++ A   P    + ++L AC   
Sbjct: 459 SMSRDHKIKPRAMHYACMIELLGREGL-LD--EAFALIKDAPFKPTVNMWAALLTACRVH 515

Query: 357 EGLDLGNQIHSLVVRVG--LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
           +  +LG      +  +G   LS+  V   L+++Y + GR+E +  L  E  K  +V  + 
Sbjct: 516 KNFELGKFAAEKLYGMGPEKLSNYVV---LLNIYNRSGRLEEAAALMLEISKHGYVPQDK 572

Query: 415 MIV 417
            ++
Sbjct: 573 FLL 575


>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 795

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 250/824 (30%), Positives = 396/824 (48%), Gaps = 145/824 (17%)

Query: 75  AMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTV 134
           A  +H  +L  G   + F  N L+N+Y K + +  A KLFD++P+ + +           
Sbjct: 24  ARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIV----------- 72

Query: 135 SSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFV 194
                                   A T  L    S G  +L   +F        D+ ++ 
Sbjct: 73  ------------------------ARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSY- 107

Query: 195 GTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKA-CL 253
             A+I A+S            DG        ALN F QM+  GF P+ FTF+ VL A  L
Sbjct: 108 -NAMITAYSHGN---------DG------HAALNLFVQMKRYGFLPDPFTFSSVLSALSL 151

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYT--------KSGEI-SNARRIFEEMP 304
             D  R  +  H   +K    +   V  ALL  Y         KS ++ ++AR++F+E P
Sbjct: 152 IADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARKVFDETP 211

Query: 305 KKDV---------------------------------IPWSFMIARYAQTDLSIDAVELF 331
           K  +                                 + W+ MI+ Y +  L  +A + F
Sbjct: 212 KNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTF 271

Query: 332 CRMRQAFVAPNQFTFVSVLQACAT----MEGLDLGNQIHSLVVRVGL------------- 374
            RM    +  +++T+ S++ AC +    M   + G Q+H  ++R  +             
Sbjct: 272 RRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNA 331

Query: 375 ----------------------LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTW 412
                                 + D+   NA++  Y    R+E +  +F+E P+RN +TW
Sbjct: 332 LITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTW 391

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
             MI G  Q G   + + +F++M  E +   +  ++  + AC+ L +L+ G Q+H   ++
Sbjct: 392 TVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIR 451

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
             +D  +   NALI MY++CG +  A  VF  M   + VSWNAMI+  + HG   + +++
Sbjct: 452 LGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIEL 511

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
           F+ M +    P+ +TF+ +L+AC++ GL+++G  YF +M   YGI P  +HY  ++ LL 
Sbjct: 512 FEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLC 571

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVL 652
           RAG   KA  +I+ +PF+    IW ALL  C IH N+E+G  +A  +L+  P  + T+++
Sbjct: 572 RAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQDGTYII 631

Query: 653 LSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGM 701
           LSN+YA    W           E+   KEPG SW+E + MVH F   D  H ++  +   
Sbjct: 632 LSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVHVFLVDDARHPEVQAVYTY 691

Query: 702 LEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKN 761
           L+ L  + +K GY+PD   VL D+  + KE  L  HSEKLA+ + + K+P  + IR+ KN
Sbjct: 692 LQQLVNEMKKLGYVPDTKFVLHDMESEHKEHSLSTHSEKLAVVYGIMKLPLGATIRVFKN 751

Query: 762 LRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           LRIC DCH A K ISK+V+REI++RD  RFHHF++G CSCG++W
Sbjct: 752 LRICGDCHNAFKYISKVVEREIVVRDRKRFHHFKNGECSCGNYW 795



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 120/484 (24%), Positives = 206/484 (42%), Gaps = 117/484 (24%)

Query: 260 VAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPK-------------- 305
           +A++ H   L + ++ + ++   L+++Y KS  I+ AR++F+++PK              
Sbjct: 23  IARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYS 82

Query: 306 -------------------KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
                              +D + ++ MI  Y+  +    A+ LF +M++    P+ FTF
Sbjct: 83  SSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTF 142

Query: 347 VSVLQACATMEGLDLGNQ-IHSLVVRVGLLSDVFVSNALMDVYAKCGR---------MEN 396
            SVL A + +   +   Q +H  V+++G L    V+NAL+  Y  C           M +
Sbjct: 143 SSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMAS 202

Query: 397 SVELFAESPK----------------RN-----------------HVTWNTMIVGYVQLG 423
           + ++F E+PK                RN                  V WN MI GYV+ G
Sbjct: 203 ARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRG 262

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS----LAALEPGMQVHCL----TVKANY 475
              +A   F +M    +   E TY+S++ AC S    +     G QVH       V+ ++
Sbjct: 263 LYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSH 322

Query: 476 DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY--------------- 520
              + V NALI  Y K   + +AR VFD M   + +SWNA++SGY               
Sbjct: 323 HFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSE 382

Query: 521 ----------------SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG 564
                           + +G   E LK+F+ M+  G  P +  F G ++ACS  G L+ G
Sbjct: 383 MPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNG 442

Query: 565 EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACI 624
           +    S V   G +  +    +++++  R G ++ A  +   +P+  SV  W A++ A  
Sbjct: 443 QQ-IHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVS-WNAMIAALA 500

Query: 625 IHNN 628
            H +
Sbjct: 501 QHGH 504


>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
          Length = 505

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 208/505 (41%), Positives = 300/505 (59%), Gaps = 13/505 (2%)

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
           MI    ++ +  D +  +  M +  V P++ +F  +L++CA      LG   H  ++++G
Sbjct: 1   MIRVSLESGVCPDFLGFYSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMG 60

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNH--VTWNTMIVGYVQLGEVGKAMIM 431
              D+ +   L+D YAK G +E +  LF    +RN   VTWNTMI  YVQ GE G A+ M
Sbjct: 61  FEYDMILQTGLLDFYAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISM 120

Query: 432 FSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAK 491
           F +M  E V  TEVT  S+L ACA L AL+ G  +H         +DVV+ NALIDMY K
Sbjct: 121 FQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCK 180

Query: 492 CGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGV 551
           CG++  A  VF  ++  N   WN++I G  M+G   E +  F +M++ G +P+ +TFVG+
Sbjct: 181 CGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGI 240

Query: 552 LSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQP 611
           LS CS+ GLL  G+ YF  M+  YG+EP +EHY  MV LLGRAG+L +A +LI  +P +P
Sbjct: 241 LSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKP 300

Query: 612 SVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE------- 664
           + M+  +LL AC IH + ++G    Q +L+ +P D   +V LSN+YA    W+       
Sbjct: 301 NSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRK 360

Query: 665 ----KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSA 720
               +   K PG S IE   +VH F AGDTSH     I   L+ +  + +  G++P+ + 
Sbjct: 361 LMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKELKGQGHVPNTAN 420

Query: 721 VLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQ 780
           VL D+ E+EKE  +  HSE++A+AF L   PP   IR++KNLR C DCH+A+K+IS   +
Sbjct: 421 VLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIRVVKNLRTCSDCHSAMKLISNAFK 480

Query: 781 REIIIRDVHRFHHFQDGCCSCGDFW 805
           REII+RD  RFHHF++G CSC D+W
Sbjct: 481 REIIVRDRKRFHHFRNGSCSCNDYW 505



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 143/276 (51%), Gaps = 5/276 (1%)

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           L F+S M      P+  +F+ +L++C      ++ ++ H   +K  +E D+ +   LLD 
Sbjct: 15  LGFYSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDF 74

Query: 287 YTKSGEISNARRIFEEMPKKDV--IPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
           Y K G +  AR +F+ M +++   + W+ MI+ Y Q      A+ +F +M+   V P + 
Sbjct: 75  YAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEV 134

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           T VS+L ACA +  LD+G  IH  +    L  DV + NAL+D+Y KCG +E ++++F   
Sbjct: 135 TMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGL 194

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
            ++N   WN++IVG    G   +A+  F  M +E +    VT+  +L  C+    L  G 
Sbjct: 195 SRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAG- 253

Query: 465 QVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA 498
           Q +   +   Y ++  V +   ++D+  + G + +A
Sbjct: 254 QRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEA 289



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 134/296 (45%), Gaps = 23/296 (7%)

Query: 142 VGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDA 201
           +G +S + R     +  +F+  L+     G A+L       + K+G + +  + T L+D 
Sbjct: 15  LGFYSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDF 74

Query: 202 FSVCGCVEFARKVFDGL----------------FNDC--FEEALNFFSQMRAVGFKPNNF 243
           ++  G VE AR +FD +                +  C  F  A++ F QM++   KP   
Sbjct: 75  YAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEV 134

Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
           T   +L AC  L  + + +  HG       ++D+ +  AL+D+Y K G +  A  +F  +
Sbjct: 135 TMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGL 194

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
            +K++  W+ +I          +A+  F  M +  + P+  TFV +L  C+    L  G 
Sbjct: 195 SRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQ 254

Query: 364 QIHSLVVRV-GLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           +  S ++ V GL   V     ++D+  + G ++ ++EL    P +     N+M++G
Sbjct: 255 RYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKP----NSMVLG 306



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/331 (24%), Positives = 128/331 (38%), Gaps = 61/331 (18%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           S++  L+SC  + + Q     HCQ++K G   D+     LL+ Y K   + +A  LFD M
Sbjct: 32  SFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKHGYVEEARNLFDNM 91

Query: 118 PER--NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAEL 175
            ER  N++++ T I  Y    +F  A+ +F  +  E  +       + L     +G  ++
Sbjct: 92  TERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDM 151

Query: 176 CPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------F 219
              +   +       +  +G ALID +  CG +E A  VF GL                 
Sbjct: 152 GEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGM 211

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           N   EEA+  F  M   G KP+  TF  +L  C                           
Sbjct: 212 NGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGC--------------------------- 244

Query: 280 AVALLDLYTKSGEISNARRIFEEM-----PKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
                   + SG +S  +R F EM      +  V  +  M+    +     +A+EL   +
Sbjct: 245 --------SHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALEL---I 293

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
           R   + PN     S+L+AC   +   LG Q+
Sbjct: 294 RAMPMKPNSMVLGSLLRACQIHKDTKLGEQV 324


>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
 gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
          Length = 629

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 237/603 (39%), Positives = 339/603 (56%), Gaps = 54/603 (8%)

Query: 257 TIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG--EISNARRIFEEMPKKDVIPWSFM 314
           T R  K  H   +KT        A  LL   T S   EI  AR+ F ++   +   W+ +
Sbjct: 27  TTRHLKQIHAHFIKTGQIHHPLAAAELLKFLTLSTQREIKYARKFFSQIHHPNCFSWNTI 86

Query: 315 IARYAQTDL-------SIDAVELFCRM-RQAFVAPNQFTFVSVLQACATMEGLDLGNQIH 366
           I   A +D        S++A+  F  M     V PN+FTF  VL+ACA +  ++ G Q+H
Sbjct: 87  IRALADSDDDDLFHVNSLEALLYFSHMLTDGLVEPNKFTFPCVLKACAKLARIEEGKQLH 146

Query: 367 SLVVRVGLLSDVFVSNALMDVYAKCGRMEN------------------------------ 396
             VV++GL+SD FV + L+ VY  CG M++                              
Sbjct: 147 GFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLEGNVVLWNVMIDGYVRMGDL 206

Query: 397 --SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
             S ELF   P ++ V+WN MI G  Q G   +A+ MF  M    VP   VT  SVL A 
Sbjct: 207 RASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQLGDVPPNYVTLVSVLPAV 266

Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFD-MMNDWNEVSW 513
           + L A+E G  VH    K   ++D V+ +ALIDMY+KCGSI  A  VF+ + N  N ++W
Sbjct: 267 SRLGAIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGSIDKAVQVFEGIRNKKNPITW 326

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA 573
           +A+I G +MHG + + L  F  MQQ G  P+++ ++GVLSACS+ GL+E+G + +  MV 
Sbjct: 327 SAIIGGLAMHGRARDALDHFWRMQQAGVTPSDVVYIGVLSACSHAGLVEEGRSIYYHMVN 386

Query: 574 NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGR 633
             G+ P IEHY  MV LLGRAG L++A +LI  +P +P  +I +ALLGAC +H N+E+G 
Sbjct: 387 IVGLLPRIEHYGCMVDLLGRAGCLEEAEQLILNMPVKPDDVILKALLGACKMHGNIEMGE 446

Query: 634 LSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMV 682
             A+ ++ + P D  ++V LSN++A   +WE               K+PG SWIE  G++
Sbjct: 447 RIAKILMGWYPHDSGSYVALSNMFASEGNWEGVVKVRLKMKELDIRKDPGCSWIELDGVI 506

Query: 683 HYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLA 742
           H F   D SH     I  MLE ++ + R  GY P+ + VL ++ E EK+  L  HSEK+A
Sbjct: 507 HEFLVEDDSHPRAEGIHSMLEEMSDRLRSVGYRPNTTQVLLNMDEKEKQSALHYHSEKIA 566

Query: 743 LAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCG 802
           +AF L    P +P++I+KNLR+C DCH++IK++SKI  R+II+RD  RFHHF++G CSC 
Sbjct: 567 IAFGLISTRPQTPLQIVKNLRVCEDCHSSIKLVSKIYNRKIIVRDRKRFHHFENGSCSCM 626

Query: 803 DFW 805
           D+W
Sbjct: 627 DYW 629



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 182/404 (45%), Gaps = 66/404 (16%)

Query: 188 HDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGF-KPNNFTFA 246
           H  N F    +I A         A    D LF+    EAL +FS M   G  +PN FTF 
Sbjct: 76  HHPNCFSWNTIIRAL--------ADSDDDDLFHVNSLEALLYFSHMLTDGLVEPNKFTFP 127

Query: 247 FVLKACLGLDTIRVAKSAHGCALK--------------------------------TCYE 274
            VLKAC  L  I   K  HG  +K                                T  E
Sbjct: 128 CVLKACAKLARIEEGKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLE 187

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
            ++ +   ++D Y + G++  +R +F+ MP K V+ W+ MI+  AQ     +A+E+F  M
Sbjct: 188 GNVVLWNVMIDGYVRMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDM 247

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
           +   V PN  T VSVL A + +  ++LG  +H    +  +  D  + +AL+D+Y+KCG +
Sbjct: 248 QLGDVPPNYVTLVSVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGSI 307

Query: 395 ENSVELFAE-SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           + +V++F     K+N +TW+ +I G    G    A+  F +M +  V  ++V Y  VL A
Sbjct: 308 DKAVQVFEGIRNKKNPITWSAIIGGLAMHGRARDALDHFWRMQQAGVTPSDVVYIGVLSA 367

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVA--------NALIDMYAKCGSITDA-RLVFDM 504
           C+    +E G  ++       Y M  +V           ++D+  + G + +A +L+ +M
Sbjct: 368 CSHAGLVEEGRSIY-------YHMVNIVGLLPRIEHYGCMVDLLGRAGCLEEAEQLILNM 420

Query: 505 MNDWNEVSWNAMISGYSMHG---LSAEVLKVFDLMQQRGWRPNN 545
               ++V   A++    MHG   +   + K+       GW P++
Sbjct: 421 PVKPDDVILKALLGACKMHGNIEMGERIAKIL-----MGWYPHD 459



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 162/390 (41%), Gaps = 64/390 (16%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYV--KLNRLPDATKLFDEMPERNTISFVTTIQG---- 131
           IH   +K G      A   LL          +  A K F ++   N  S+ T I+     
Sbjct: 34  IHAHFIKTGQIHHPLAAAELLKFLTLSTQREIKYARKFFSQIHHPNCFSWNTIIRALADS 93

Query: 132 -----YTVSSQFVEAVGLFSTLHREGH-ELNPFAFTAFLKVLVSMGWAELCPCVFACVYK 185
                + V+S  +EA+  FS +  +G  E N F F   LK    +   E    +   V K
Sbjct: 94  DDDDLFHVNS--LEALLYFSHMLTDGLVEPNKFTFPCVLKACAKLARIEEGKQLHGFVVK 151

Query: 186 LGHDSNAFVGTALIDAFSVCGCVEFA--------------------------------RK 213
           LG  S+ FV + L+  + +CG ++ A                                R+
Sbjct: 152 LGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLEGNVVLWNVMIDGYVRMGDLRASRE 211

Query: 214 VFDGLFNDC----------------FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDT 257
           +FD + N                  F+EA+  F  M+     PN  T   VL A   L  
Sbjct: 212 LFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQLGDVPPNYVTLVSVLPAVSRLGA 271

Query: 258 IRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
           I + K  H  A K   E+D  +  AL+D+Y+K G I  A ++FE +  KK+ I WS +I 
Sbjct: 272 IELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGSIDKAVQVFEGIRNKKNPITWSAIIG 331

Query: 317 RYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR-VGLL 375
             A    + DA++ F RM+QA V P+   ++ VL AC+    ++ G  I+  +V  VGLL
Sbjct: 332 GLAMHGRARDALDHFWRMQQAGVTPSDVVYIGVLSACSHAGLVEEGRSIYYHMVNIVGLL 391

Query: 376 SDVFVSNALMDVYAKCGRMENSVELFAESP 405
             +     ++D+  + G +E + +L    P
Sbjct: 392 PRIEHYGCMVDLLGRAGCLEEAEQLILNMP 421



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 107/242 (44%), Gaps = 34/242 (14%)

Query: 95  NVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHE 154
           NV+++ YV++  L  + +LFD MP ++ +S+   I G   +  F EA+ +F  +      
Sbjct: 194 NVMIDGYVRMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQLGDVP 253

Query: 155 LNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKV 214
            N     + L  +  +G  EL   V     K   + +  +G+ALID +S CG ++ A +V
Sbjct: 254 PNYVTLVSVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGSIDKAVQV 313

Query: 215 FDGLFNDC-----------------FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDT 257
           F+G+ N                     +AL+ F +M+  G  P++  +  VL AC     
Sbjct: 314 FEGIRNKKNPITWSAIIGGLAMHGRARDALDHFWRMQQAGVTPSDVVYIGVLSACSHAGL 373

Query: 258 IRVAKSAHGCALKTCYEMDLYVAV--------ALLDLYTKSGEISNARRIFEEMPKK--D 307
           +   +S +       Y M   V +         ++DL  ++G +  A ++   MP K  D
Sbjct: 374 VEEGRSIY-------YHMVNIVGLLPRIEHYGCMVDLLGRAGCLEEAEQLILNMPVKPDD 426

Query: 308 VI 309
           VI
Sbjct: 427 VI 428


>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
 gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
          Length = 897

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 232/702 (33%), Positives = 378/702 (53%), Gaps = 27/702 (3%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
           F+  S A  L++C   ++    + +H  V+K G   D+   + LL +Y K  RL D+  +
Sbjct: 179 FDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSV 238

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           F E+PE+N +S+   I G   + + VE + LF  +   G  ++   + +  +   ++   
Sbjct: 239 FSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSAL 298

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FN------ 220
            L   + +   K    S+  VGTA +D ++ CG +  A+KV   +       +N      
Sbjct: 299 RLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGY 358

Query: 221 ---DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
              D   +AL  F  +   G   +  T +  L AC  +      +  HG A+K+    ++
Sbjct: 359 ARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNI 418

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
            VA A+LD+Y K   ++ A  +F+ M ++D + W+ +IA   Q     + +  F  M  +
Sbjct: 419 CVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHS 478

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            + P+ FT+ SVL+ACA  + L+ G +IH+ +++ G+  D FV  AL+D+Y KCG +E +
Sbjct: 479 RMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKA 538

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
            ++   + ++  V+WN +I G+  L +   A   FS+MLE  V     TY++VL  CA+L
Sbjct: 539 DKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANL 598

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
           A +  G Q+H   +K     DV + + L+DMY+KCG++ D++L+F+   + + V+WNAM+
Sbjct: 599 ATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAML 658

Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
            GY+ HGL  E LK+F+ MQ    +PN+ TFV VL AC++ GL+++G  YF  M++ YG+
Sbjct: 659 CGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSEYGL 718

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQ 637
           +P  EHY+ MV +LGR+G +D+A  L++ +PF+   +IWR LL  C IH NVE+   + +
Sbjct: 719 DPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVEVAEKATR 778

Query: 638 HILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFR 686
            +L  +P+D +  VLLSNIYA A  W   +            KEPG SWIE +  VH F 
Sbjct: 779 ALLQLDPQDSSACVLLSNIYADAGMWGNVSEMRKMMRHNKLKKEPGCSWIELKDEVHAFL 838

Query: 687 AGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVRED 728
            GD  H     I   L  L  + +  GYIPD   +L +  E+
Sbjct: 839 VGDKGHPRDEEIYEKLGVLIGEMQSVGYIPDCDVLLDEEVEE 880



 Score =  268 bits (685), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 156/557 (28%), Positives = 279/557 (50%), Gaps = 18/557 (3%)

Query: 80  CQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFV 139
           C+V  K    D+ + N +++ Y     +  A K F EMPER+ +S+ + I G+  + +  
Sbjct: 104 CKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECR 163

Query: 140 EAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALI 199
           +++ +F  + R G   +  +    LK   ++   ++   V   V K G D +   G+AL+
Sbjct: 164 KSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALL 223

Query: 200 DAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNF 243
             ++ C  ++ +  VF  L                 ND   E L  F +M+ VG   +  
Sbjct: 224 GMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQS 283

Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
            +A + ++C  L  +R+ K  H  ALK+ +  D+ V  A LD+Y K G +++A+++   M
Sbjct: 284 IYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSM 343

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
           PK  +  ++ +I  YA++D    A++ F  + +  +  ++ T    L ACA++ G   G 
Sbjct: 344 PKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGR 403

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
           Q+H L V+   +S++ V+NA++D+Y KC  +  + +LF    +R+ V+WN +I    Q G
Sbjct: 404 QVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNG 463

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN 483
              + +  F+ M+  ++   + TY SVL+ACA   AL  GM++H   +K+    D  V  
Sbjct: 464 NEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGA 523

Query: 484 ALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRP 543
           AL+DMY KCG I  A  + D       VSWNA+ISG+S+   S +  K F  M + G  P
Sbjct: 524 ALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNP 583

Query: 544 NNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKL 603
           +N T+  VL  C+N   +  G+     ++    ++  +   +++V +  + G++  +  +
Sbjct: 584 DNFTYAAVLDTCANLATVGLGKQIHAQIIKQE-LQSDVYICSTLVDMYSKCGNMQDSQLM 642

Query: 604 IEGIPFQPSVMIWRALL 620
            E  P +  V  W A+L
Sbjct: 643 FEKAPNRDFV-TWNAML 658



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 155/544 (28%), Positives = 270/544 (49%), Gaps = 39/544 (7%)

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHRE---GHELNP--------- 157
           A  LF ++P   T +F T  Q  T   Q    +  FS +++E    + LNP         
Sbjct: 20  AIPLFKKIPPIPTNNFSTLAQNQT---QPPAKIRTFSHIYQECSKQNSLNPGKQAHARMI 76

Query: 158 ---FAFTAFLKVLVSMGWAELCPCVFAC-VYKLGHDSNAFVGTALIDAFSVCGCVEFARK 213
              F  T F+   +   + +     +AC V+   +  +     ++I  ++ CG ++ ARK
Sbjct: 77  FCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKMYLRDVVSYNSIISGYASCGEMDIARK 136

Query: 214 VF----------------DGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDT 257
            F                  L N    ++++ F +M   G   +  + A VLKAC  L+ 
Sbjct: 137 FFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEE 196

Query: 258 IRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIAR 317
             +    HG  +K  ++ D+    ALL +Y K   + ++  +F E+P+K+ + WS MIA 
Sbjct: 197 CDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAG 256

Query: 318 YAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD 377
             Q D +++ +ELF  M+   V  +Q  + S+ ++CA +  L LG ++HS  ++    SD
Sbjct: 257 CVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSD 316

Query: 378 VFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
           + V  A +D+YAKCGRM ++ ++ +  PK +  ++N +IVGY +     +A+  F  +L+
Sbjct: 317 IIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLK 376

Query: 438 EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITD 497
             +   E+T S  L ACAS+     G QVH L VK+    ++ VANA++DMY KC ++ +
Sbjct: 377 TGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAE 436

Query: 498 ARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSN 557
           A  +FDMM   + VSWNA+I+    +G   E L  F  M      P++ T+  VL AC+ 
Sbjct: 437 ASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAG 496

Query: 558 GGLLEQG-EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIW 616
              L  G E + + + +  G +  +    ++V +  + G ++KA K+ +    Q +++ W
Sbjct: 497 RQALNTGMEIHTRIIKSGMGFDSFVG--AALVDMYCKCGMIEKADKIHDRTE-QKTMVSW 553

Query: 617 RALL 620
            A++
Sbjct: 554 NAII 557



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 131/288 (45%), Gaps = 30/288 (10%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E +  +Y + L++C     L T M IH +++K G   D F    L+++Y K   +  A K
Sbjct: 481 EPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADK 540

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           + D   ++  +S+   I G+++  Q  +A   FS +   G   + F + A L    ++  
Sbjct: 541 IHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLAT 600

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF--------- 223
             L   + A + K    S+ ++ + L+D +S CG ++ ++ +F+   N  F         
Sbjct: 601 VGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCG 660

Query: 224 -------EEALNFFSQMRAVGFKPNNFTFAFVLKACL-------GLDTIRVAKSAHGCAL 269
                  EEAL  F  M+ V  KPN+ TF  VL+AC        GL    V  S +G   
Sbjct: 661 YAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSEYGLDP 720

Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
           ++ +         ++D+  +SG I  A  + ++MP + D + W  +++
Sbjct: 721 QSEH------YSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLS 762


>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Vitis vinifera]
          Length = 647

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 228/606 (37%), Positives = 338/606 (55%), Gaps = 51/606 (8%)

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNA--RRIFEEMPK 305
           VL  C  ++ +   K  H    +   E   +V   LL   TK     +   R +F+++  
Sbjct: 45  VLHGCTHINQV---KQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQVEY 101

Query: 306 KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
            +   W+ +I  YA     +++V L+  MR+  + P  FTF ++L+AC+    ++LG Q+
Sbjct: 102 PNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQV 161

Query: 366 HSLVVRVGLL-SDVFVSNALMDVYAKCG-------------------------------R 393
           H+  + +G   SD++V N L+D+Y KCG                                
Sbjct: 162 HTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGN 221

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           ME + ELF   P ++ V W  M+ GY Q     +A+ +F +M    V   EVT   V+ A
Sbjct: 222 MEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISA 281

Query: 454 CASLAALEPGMQVHCLTVKANYD--MDVVVANALIDMYAKCGSITDARLVFDMMNDWNEV 511
           CA L A +    V  +  ++ +    +VVV +ALIDMYAKCGS+ DA  VF+ M + N  
Sbjct: 282 CAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVY 341

Query: 512 SWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSM 571
           S+++MI G++MHGL+   +++FD M +   +PN +TF+GVL+ACS+ G++EQG+  F  M
Sbjct: 342 SYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMM 401

Query: 572 VANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEI 631
              +G+ P  +HY  MV LLGRAG L++A  L++ +P  P   +W ALLGAC IH N ++
Sbjct: 402 EECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIHGNPDM 461

Query: 632 GRLSAQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIEN-Q 679
            +++A H+ + EP     ++LLSNIYA A  W+           K   K PG SW+E  +
Sbjct: 462 AQIAASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCSWVEGKK 521

Query: 680 GMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSE 739
           G++H F AGD SH     I+  LE L  + +  GY P+LS+V  D+ ++EK+R L  HSE
Sbjct: 522 GIIHEFFAGDMSHPKSREIKQALEDLLDRLKYLGYQPNLSSVAYDISDEEKKRLLMSHSE 581

Query: 740 KLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCC 799
           KLALAF L        IRI+KNLRIC DCH+ +   S+I  REI++RD  RFHHF+DG C
Sbjct: 582 KLALAFGLLTTNAGCTIRIVKNLRICEDCHSVMCGASQITGREIVVRDNMRFHHFRDGRC 641

Query: 800 SCGDFW 805
           SCG+FW
Sbjct: 642 SCGNFW 647



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 176/375 (46%), Gaps = 61/375 (16%)

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLK 250
           N F+ TALI  +++ G                F E++  ++ MR  G  P +FTF  +LK
Sbjct: 103 NPFLWTALIRGYALQGP---------------FMESVLLYNSMRRQGIGPVSFTFTALLK 147

Query: 251 ACLGLDTIRVAKSAHG-CALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM------ 303
           AC     + + +  H    L   +  DLYV   L+D+Y K G +    R+F+EM      
Sbjct: 148 ACSAALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVI 207

Query: 304 -------------------------PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
                                    P KD++ W+ M+  YAQ     +A+E+F RM+ A 
Sbjct: 208 SWTSLIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAG 267

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL--LSDVFVSNALMDVYAKCGRMEN 396
           V  ++ T V V+ ACA +      N +  +  + G    S+V V +AL+D+YAKCG +E+
Sbjct: 268 VKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVED 327

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           + ++F    +RN  ++++MIVG+   G  G AM +F +ML+ ++    VT+  VL AC+ 
Sbjct: 328 AYKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSH 387

Query: 457 LAALEPGMQV-----HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDM--MNDWN 509
              +E G Q+      C  V  + D        ++D+  + G + +A  +  M  MN   
Sbjct: 388 AGMVEQGQQLFAMMEECHGVAPSEDHYA----CMVDLLGRAGRLEEALNLVKMMPMNPHG 443

Query: 510 EVSWNAMISGYSMHG 524
            V W A++    +HG
Sbjct: 444 GV-WGALLGACRIHG 457



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 115/459 (25%), Positives = 191/459 (41%), Gaps = 60/459 (13%)

Query: 36  TQQCSNSTTTPITFSVSEFNS---HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLF 92
           T  C   T + I FSV +          + L  C   + ++    +H  + +KG     F
Sbjct: 16  TSYCQLQTQSFIPFSVRQEQKILESRLVSVLHGCTHINQVKQ---VHAHIFRKGLEQCCF 72

Query: 93  ATNVLLNVYVKLNRL--PDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHR 150
               LL    KL+    P    +F ++   N   +   I+GY +   F+E+V L++++ R
Sbjct: 73  VLAKLLRTLTKLDVPMDPYPRLVFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRR 132

Query: 151 EGHELNPFAFTAFLKVLVSMGWAELCPCVFA-CVYKLGHDSNAFVGTALIDAFSVCGCV- 208
           +G     F FTA LK   +     L   V    +   G  S+ +VG  LID +  CGC+ 
Sbjct: 133 QGIGPVSFTFTALLKACSAALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLG 192

Query: 209 ------------------------------EFARKVFDGL----------------FNDC 222
                                         E A ++FDGL                 N  
Sbjct: 193 CGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNAR 252

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY--EMDLYVA 280
             EAL  F +M+A G K +  T   V+ AC  L   + A      A ++ +    ++ V 
Sbjct: 253 PREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVG 312

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
            AL+D+Y K G + +A ++FE M +++V  +S MI  +A   L+  A+ELF  M +  + 
Sbjct: 313 SALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIK 372

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRV-GLLSDVFVSNALMDVYAKCGRMENSVE 399
           PN+ TF+ VL AC+    ++ G Q+ +++    G+         ++D+  + GR+E ++ 
Sbjct: 373 PNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALN 432

Query: 400 LFAESPKRNH-VTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
           L    P   H   W  ++      G    A I  S + E
Sbjct: 433 LVKMMPMNPHGGVWGALLGACRIHGNPDMAQIAASHLFE 471


>gi|326526571|dbj|BAJ97302.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 851

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 252/765 (32%), Positives = 410/765 (53%), Gaps = 40/765 (5%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPE--RNTISFVTTIQGYTVS 135
           +H    K G   D F  N L+++Y +  R+ DA K+F  +P+  RN +S+   +    +S
Sbjct: 90  VHALAAKLGLPGDPFVGNSLVSMYGRCGRVEDAEKVFGGIPDAARNIVSWNALMA--ALS 147

Query: 136 SQFVEAVGLFST-LHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFV 194
                 + LF   L   G  ++       L +  ++GW+E    V     K G D+ A V
Sbjct: 148 GDPRRGLELFRDCLVAVGGMVDEATLVTVLPMCAALGWSETGRAVHGLAAKSGWDAPARV 207

Query: 195 GTALIDAFSVCGCVEFARKVFD------------GLFNDCFEEALNFF----SQMRAVGF 238
           G AL+D ++ CG +  A + F             G +    E    F      Q++  G 
Sbjct: 208 GNALVDMYAKCGELADAERAFPEAPSVVSWNVMLGAYTRNREAGAAFGLLRDMQIKEHGS 267

Query: 239 KP-NNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM-DLYVAVALLDLYTKSGEISNA 296
            P +  T   VL AC G   +   +  H   ++   +     V  AL+  Y + G + +A
Sbjct: 268 VPADEITVLSVLPACSGPTELSRLRELHAFTVRRGLDAASDKVPNALVAAYGRCGRLLHA 327

Query: 297 RRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA-FVAPNQFTFVSVLQACAT 355
            R+F ++ +K V  W+ +I+ +AQ + +  A+ELF +M  A  + P+ F+  S+L ACA 
Sbjct: 328 DRVFTDIRRKTVSSWNTLISAHAQQNTAA-AIELFIQMTNACGLKPDGFSIGSLLMACAD 386

Query: 356 MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE-LFAESPKRNHVTWNT 414
            + L      H  ++R GL  D  +  +L+  Y +C R E     LF    ++  V W  
Sbjct: 387 PKHLLHVKATHGFILRNGLERDTVIRASLLSAYIRCSRTEYLARVLFDAMEEKGEVLWIA 446

Query: 415 MIVGYVQLGEVGKAMIMFSKMLE-EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
           MI GY Q G  G+++ +F +M   E   ++ ++ +S L AC+ L+++  G ++HC  +KA
Sbjct: 447 MISGYSQNGLPGESLQLFREMQSVEGHCSSVISATSALMACSELSSVRLGKEMHCFALKA 506

Query: 474 NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWN-EVSWNAMISGYSMHGLSAEVLKV 532
           +   D  ++++LIDMY+KCG + DAR  FD +   + +VSW AMI+GY+++GL  E +++
Sbjct: 507 DLCDDPFLSSSLIDMYSKCGFVEDARTFFDRLKARDAKVSWTAMITGYAVNGLGREAVEL 566

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV-ANYGIEPCIEHYTSMVSLL 591
           +  M++ G  P+  T++G+L AC + G+LE+G  +F  M   ++ IE  +EHY+ ++ +L
Sbjct: 567 YGKMRREGMEPDEFTYLGLLMACGHAGMLEEGLRFFDEMRNHHHKIEVKLEHYSCVIGML 626

Query: 592 GRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHV 651
            RAG    A  L+  +P +P   I  ++L AC IH   E+G   A+ +L+ EP+    +V
Sbjct: 627 SRAGRFADAVALMAEMPQEPDAKILSSVLSACHIHGEAELGSDVAERLLELEPDKAEHYV 686

Query: 652 LLSNIYAMARSWEK-----------AASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRG 700
           L SN+YA +R W+              +KEPG SWI+  G V+ F AG+  H +M  +RG
Sbjct: 687 LASNMYAGSRRWDDMRKVRKMLRDAGIAKEPGCSWIDVAGKVYSFVAGENPHPEMEQVRG 746

Query: 701 MLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIK 760
           M   L  + R+ GY+PD + VL ++ E+EK   LW HSEK A+ F L +    + +R+ K
Sbjct: 747 MWRSLEERIREIGYVPDTTVVLHELEEEEKVEALWWHSEKQAVTFGLLRTATPATVRVFK 806

Query: 761 NLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           N+R+C DCH A ++ISK+  R+I++RD  RFHHF+ G CSCGD+W
Sbjct: 807 NIRMCKDCHNAARLISKVTGRDIVVRDKKRFHHFRGGICSCGDYW 851



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 145/300 (48%), Gaps = 15/300 (5%)

Query: 339 VAPNQFTFVSVLQACATME--GLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
           +AP++FT     ++C  +       G Q+H+L  ++GL  D FV N+L+ +Y +CGR+E+
Sbjct: 62  IAPDRFTLPPAARSCGFLRVGAAAAGRQVHALAAKLGLPGDPFVGNSLVSMYGRCGRVED 121

Query: 397 SVELFAESPK--RNHVTWNTMIVGYVQLGEVGKAMIMFSK-MLEEQVPATEVTYSSVLRA 453
           + ++F   P   RN V+WN ++      G+  + + +F   ++       E T  +VL  
Sbjct: 122 AEKVFGGIPDAARNIVSWNALMAALS--GDPRRGLELFRDCLVAVGGMVDEATLVTVLPM 179

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
           CA+L   E G  VH L  K+ +D    V NAL+DMYAKCG + DA   F      + VSW
Sbjct: 180 CAALGWSETGRAVHGLAAKSGWDAPARVGNALVDMYAKCGELADAERAFPEAP--SVVSW 237

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQ--QRGWRP-NNLTFVGVLSACSNGGLLEQGEAYFKS 570
           N M+  Y+ +  +     +   MQ  + G  P + +T + VL ACS    L +      +
Sbjct: 238 NVMLGAYTRNREAGAAFGLLRDMQIKEHGSVPADEITVLSVLPACSGPTELSRLRE-LHA 296

Query: 571 MVANYGIEPCIEHY-TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNV 629
                G++   +    ++V+  GR G L  A ++   I  + +V  W  L+ A    N  
Sbjct: 297 FTVRRGLDAASDKVPNALVAAYGRCGRLLHADRVFTDI-RRKTVSSWNTLISAHAQQNTA 355



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 1/108 (0%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           S  ++L +C +   ++    +HC  LK   C D F ++ L+++Y K   + DA   FD +
Sbjct: 479 SATSALMACSELSSVRLGKEMHCFALKADLCDDPFLSSSLIDMYSKCGFVEDARTFFDRL 538

Query: 118 PERNT-ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFL 164
             R+  +S+   I GY V+    EAV L+  + REG E + F +   L
Sbjct: 539 KARDAKVSWTAMITGYAVNGLGREAVELYGKMRREGMEPDEFTYLGLL 586


>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Vitis vinifera]
          Length = 825

 Score =  414 bits (1064), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 231/695 (33%), Positives = 386/695 (55%), Gaps = 29/695 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N    A+ +++C Q   ++    +H  V++ G   D++    L++ Y K   + +A  +F
Sbjct: 128 NEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVF 187

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D++ E+  +++ T I GYT   +   ++ LF+ +       + +  ++ L     + + E
Sbjct: 188 DQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLE 247

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GLF 219
               + A V + G + +  V   LID ++ C  V+  RK+FD               G  
Sbjct: 248 GGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYM 307

Query: 220 NDCFE-EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            + F+ EA+  F +M  +G+KP+ F    VL +C   + +   +  H   +K   E D +
Sbjct: 308 QNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEF 367

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V   L+D+Y KS  + +A+++F+ M +++VI ++ MI  Y+  +   +A+ELF  MR   
Sbjct: 368 VKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRL 427

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
             P+  TFVS+L   A++  L+L  QIH L+++ G+  D+F  +AL+DVY+KC  ++++ 
Sbjct: 428 FPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDAR 487

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            +F E  +++ V WN M  GY Q  E  +A+ ++S +   +    E T+++++ A ++LA
Sbjct: 488 HVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLA 547

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           +L  G Q H   VK   D    V NAL+DMYAKCGSI +AR +F+     + V WN+MIS
Sbjct: 548 SLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMIS 607

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
            ++ HG + E L +F  M + G +PN +TFV VLSACS+ G +E G  +F SM   +GI+
Sbjct: 608 THAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSM-PGFGIK 666

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P  EHY  +VSLLGR+G L +A + IE +P +P+ ++WR+LL AC I  NVE+G+ +A+ 
Sbjct: 667 PGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEM 726

Query: 639 ILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRA 687
            +  +P+D  +++LLSNI+A    W                KEPG SWIE    V+ F A
Sbjct: 727 AISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIA 786

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVL 722
            DT+H + + I  +L+ L    + AGY+PD +A+L
Sbjct: 787 RDTTHREAD-IGSVLDILIQHIKGAGYVPDATALL 820



 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 184/589 (31%), Positives = 308/589 (52%), Gaps = 19/589 (3%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           +A  LQ  I  + +     IH Q++  G   D F  N+L+NV  K +R+ +A  +FD+MP
Sbjct: 30  FANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMP 89

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHRE-GHELNPFAFTAFLKVLVSMGWAELCP 177
            +N I++ + +  Y+      EA+ +F  L R+ G   N F   + ++    +G  E   
Sbjct: 90  HKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGA 149

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL--------------FNDCF 223
            +   V + G D + +VGT+LID +S  G +E AR VFD L              +  C 
Sbjct: 150 QLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCG 209

Query: 224 EEA--LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
             A  L  F+QMR     P+ +  + VL AC  L+ +   K  H   L+   EMD+ V  
Sbjct: 210 RSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVN 269

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
            L+D YTK   +   R++F++M  K++I W+ MI+ Y Q     +A++LF  M +    P
Sbjct: 270 VLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKP 329

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           + F   SVL +C + E L+ G Q+H+  ++  L SD FV N L+D+YAK   + ++ ++F
Sbjct: 330 DGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVF 389

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
               ++N +++N MI GY    ++ +A+ +F +M     P + +T+ S+L   ASL ALE
Sbjct: 390 DVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALE 449

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
              Q+H L +K    +D+   +ALID+Y+KC  + DAR VF+ MN+ + V WNAM  GY+
Sbjct: 450 LSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYT 509

Query: 522 MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
            H  + E LK++  +Q    +PN  TF  +++A SN   L  G+ +   +V   G++ C 
Sbjct: 510 QHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLV-KMGLDFCP 568

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
               ++V +  + G +++A K+     ++  V+ W +++     H   E
Sbjct: 569 FVTNALVDMYAKCGSIEEARKMFNSSIWR-DVVCWNSMISTHAQHGEAE 616



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 115/328 (35%), Positives = 185/328 (56%), Gaps = 1/328 (0%)

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR 297
            +P    FA +L+  +  + I   K  HG  + +  + D ++A  L+++ +KS  + NAR
Sbjct: 23  LRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNAR 82

Query: 298 RIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQACATM 356
            +F++MP K++I WS M++ Y+Q   S +A+ +F  + R++   PN+F   SV++AC  +
Sbjct: 83  VVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQL 142

Query: 357 EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMI 416
             ++ G Q+H  VVR G   DV+V  +L+D Y+K G +E +  +F +  ++  VTW T+I
Sbjct: 143 GVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTII 202

Query: 417 VGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD 476
            GY + G    ++ +F++M E  V       SSVL AC+ L  LE G Q+H   ++   +
Sbjct: 203 AGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTE 262

Query: 477 MDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLM 536
           MDV V N LID Y KC  +   R +FD M   N +SW  MISGY  +    E +K+F  M
Sbjct: 263 MDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEM 322

Query: 537 QQRGWRPNNLTFVGVLSACSNGGLLEQG 564
            + GW+P+      VL++C +   LEQG
Sbjct: 323 NRLGWKPDGFACTSVLTSCGSREALEQG 350



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/265 (21%), Positives = 107/265 (40%), Gaps = 19/265 (7%)

Query: 45  TPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKL 104
           + + FS  + N  ++A  + +      L+     H Q++K G     F TN L+++Y K 
Sbjct: 522 STLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKC 581

Query: 105 NRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFL 164
             + +A K+F+    R+ + + + I  +    +  EA+G+F  + +EG + N   F A L
Sbjct: 582 GSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVL 641

Query: 165 KVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFE 224
                 G  E           L H  N+  G  +        CV         LF     
Sbjct: 642 SACSHAGRVE---------DGLNH-FNSMPGFGIKPGTEHYACVVSLLGRSGKLF----- 686

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           EA  F  +M     +P    +  +L AC     + + K A   A+ T  + D    + L 
Sbjct: 687 EAKEFIEKMP---IEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPK-DSGSYILLS 742

Query: 285 DLYTKSGEISNARRIFEEMPKKDVI 309
           +++   G  ++ +++ + M   +V+
Sbjct: 743 NIFASKGMWADVKKVRDRMDSSEVV 767


>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score =  414 bits (1064), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 254/760 (33%), Positives = 376/760 (49%), Gaps = 132/760 (17%)

Query: 94  TNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGH 153
           +N +L+   K  R+ DA KLFD MP+R+  S+ T              +G ++   R   
Sbjct: 44  SNWVLSNLSKCGRVDDARKLFDVMPDRDECSWNTM-------------IGAYANSGRLNE 90

Query: 154 ELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARK 213
               F  T                 + +C+            ++LI  +   GC      
Sbjct: 91  ARKLFYETP----------------IRSCI----------TWSSLISGYCRYGCDV---- 120

Query: 214 VFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY 273
                      EAL  F +M+  G +PN FT+  VL+ C     +   K  H  A+KT +
Sbjct: 121 -----------EALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQF 169

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIARYAQTDLSIDAVELFC 332
           + + +V   L+D+Y K   I  A  +FE  P K++ + W+ M+  Y+Q      A+E F 
Sbjct: 170 DSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFR 229

Query: 333 RMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCG 392
            MR   +  NQFTF S+L AC ++     G Q+H  +VR G  ++VFV +AL+D+Y+KCG
Sbjct: 230 DMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCG 289

Query: 393 RMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLR 452
            + N+  +       + V+WN+MIVG V+ G   +A+ +F  M    +   E TY S+  
Sbjct: 290 DLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSL-- 347

Query: 453 ACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS 512
                                       V NAL+DMYAK G    A  VF+ M D + +S
Sbjct: 348 ----------------------------VNNALVDMYAKRGYFDYAFDVFEKMTDKDVIS 379

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNG--------GLLE-- 562
           W ++++G   +G   E L++F  M+  G  P+ +    VLSA  N         G +E  
Sbjct: 380 WTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSALDNSLVSMYAKCGCIEDA 439

Query: 563 --------------------------QGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGH 596
                                     +G  YF+SM   YGI+P  EHY  M+ LLGR+G 
Sbjct: 440 NKVFDSMEIQDVITWTALIVGYAQNGRGRDYFQSMEEVYGIKPGPEHYACMIDLLGRSGK 499

Query: 597 LDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNI 656
           L +A +L+  +  QP   +W+ALL AC +H NVE+G  +A ++ + EP++   +VLLSN+
Sbjct: 500 LMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNL 559

Query: 657 YAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWL 705
           Y+ A  WE+AA           SKEPG SWIE    VH F + D SH     I   ++ +
Sbjct: 560 YSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEI 619

Query: 706 NMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRIC 765
            +  ++AGY+PD++  L D+ E+ KE  L  HSEKLA+AF L  MPP +PIRI KNLRIC
Sbjct: 620 MILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRIC 679

Query: 766 VDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            DCHTA+K +S +  R +I+RD + FHHF++G CSC D+W
Sbjct: 680 GDCHTAMKYVSGVFHRHVILRDSNCFHHFREGACSCSDYW 719



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 113/488 (23%), Positives = 197/488 (40%), Gaps = 112/488 (22%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  ++ + L+ C     L+    IH   +K     + F    L+++Y K   + +A  LF
Sbjct: 137 NQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLF 196

Query: 115 DEMPE-RNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           +  P+ RN + +   + GY+ +    +A+  F  +  EG E N F F + L    S+   
Sbjct: 197 ELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISAC 256

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND-----------C 222
                V  C+ + G  +N FVG+AL+D +S CG +  AR++ + +  D           C
Sbjct: 257 GFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGC 316

Query: 223 F-----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
                 EEAL+ F  M     K + FT+  +                             
Sbjct: 317 VRQGLGEEALSLFRIMHLRHMKIDEFTYPSL----------------------------- 347

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
            V  AL+D+Y K G    A  +FE+M  KDVI W+ ++          +A+ LFC MR  
Sbjct: 348 -VNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIM 406

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            + P+Q    +VL A                           + N+L+ +YAKCG +E++
Sbjct: 407 GIHPDQIVIAAVLSA---------------------------LDNSLVSMYAKCGCIEDA 439

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
            ++F     ++ +TW  +IVGY Q    G+    F  M E                   +
Sbjct: 440 NKVFDSMEIQDVITWTALIVGYAQ---NGRGRDYFQSMEE-------------------V 477

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS-WNAM 516
             ++PG + +                 +ID+  + G + +A+ + + M    + + W A+
Sbjct: 478 YGIKPGPEHYA---------------CMIDLLGRSGKLMEAKELLNQMAVQPDATVWKAL 522

Query: 517 ISGYSMHG 524
           ++   +HG
Sbjct: 523 LAACRVHG 530



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 138/306 (45%), Gaps = 34/306 (11%)

Query: 351 QACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHV 410
           + C  +E  +L + I   V   G +     SN ++   +KCGR++++ +LF   P R+  
Sbjct: 14  KVCHQLEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLFDVMPDRDEC 73

Query: 411 TWNTMIVGYVQLGEVG-------------------------------KAMIMFSKMLEEQ 439
           +WNTMI  Y   G +                                +A+ +F +M  E 
Sbjct: 74  SWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEG 133

Query: 440 VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR 499
               + T+ SVLR C+    LE G Q+H   +K  +D +  V   L+DMYAKC  I +A 
Sbjct: 134 ERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAE 193

Query: 500 LVFDMMND-WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNG 558
            +F++  D  N V W AM++GYS +G   + ++ F  M+  G   N  TF  +L+AC + 
Sbjct: 194 YLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSI 253

Query: 559 GLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRA 618
                G A     +   G    +   +++V +  + G L  A +++E +     V  W +
Sbjct: 254 SACGFG-AQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVS-WNS 311

Query: 619 LLGACI 624
           ++  C+
Sbjct: 312 MIVGCV 317


>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
 gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
          Length = 680

 Score =  414 bits (1064), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 236/665 (35%), Positives = 367/665 (55%), Gaps = 30/665 (4%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
             + H++   L++C  +  +Q    IH  V K G   D+F  N LL  Y     L D  +
Sbjct: 4   RLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKR 63

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH-REGHELNPFAFTAFLKVLVSMG 171
           +FDEM ER+ +S+ + I  ++V   + EA+ LF  ++ R G   N  +  + L V   + 
Sbjct: 64  VFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLE 123

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL------------- 218
                  +   V K G DS   VG AL+D +  CG V+ +R+VFD +             
Sbjct: 124 DGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIIT 183

Query: 219 ---FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
              + +  ++AL  F  M   G KPN+ TF+ +L   + L      K  HG +L+   E 
Sbjct: 184 SLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLES 243

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
           D++VA AL+D+Y KSG    A  +F ++ +K+++ W+ M+A +AQ  L + AV+L  +M+
Sbjct: 244 DIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQ 303

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
                PN  TF +VL ACA +  L  G +IH+  +R G   D+FVSNAL D+YAKCG + 
Sbjct: 304 ADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLN 363

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
            +  +F  S  R+ V++N +I+GY Q     +++ +F +M  + +    V+Y  V+ ACA
Sbjct: 364 LARRVFKISL-RDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACA 422

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
           +LAAL+ G +VH L V+ +    + +ANAL+D Y KCG I  A  VF  +   +  SWN+
Sbjct: 423 NLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNS 482

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           MI GY M G     + +F+ M++ G   ++++++ VLSACS+GGL+E+G+ YF+ M    
Sbjct: 483 MILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQVQ- 541

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS 635
            I+P   HY  MV LLGRAG +++A KLIE +P +P   +W ALLGAC IH  +E+   +
Sbjct: 542 NIKPTQMHYACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGACRIHGYIELAHWA 601

Query: 636 AQHILDFEPEDEATHVLLSNIYAMARSWEKA-----------ASKEPGLSWIENQGMVHY 684
           A+H+   +P+    + +LSN+YA A  W++A           A K PG SW++    VH 
Sbjct: 602 AEHLFKLKPQHSGYYSVLSNMYAEAGKWDEANQVRKLMKSRGAKKNPGCSWVQIDNQVHA 661

Query: 685 FRAGD 689
           F AG+
Sbjct: 662 FVAGE 666



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 123/332 (37%), Positives = 187/332 (56%), Gaps = 3/332 (0%)

Query: 236 VGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISN 295
           +G + ++ TF FVLKAC    +++  +  HG   K  ++ D++V   LL  Y   G + +
Sbjct: 1   MGVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKD 60

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM--RQAFVAPNQFTFVSVLQAC 353
            +R+F+EM ++DV+ W+ +I  ++      +A+ LFC M  R  F  PN  + VSVL  C
Sbjct: 61  VKRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGF-RPNMVSIVSVLPVC 119

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
           A +E    G QIH  VV+ GL S V V NAL+DVY KCG +++S  +F E  +RN V+WN
Sbjct: 120 AGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWN 179

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
            +I     L     A+ MF  M++  V    VT+SS+L     L   + G ++H  +++ 
Sbjct: 180 AIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRF 239

Query: 474 NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVF 533
             + D+ VANALIDMYAK G    A  VF+ + + N VSWNAM++ ++ + L    + + 
Sbjct: 240 GLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLV 299

Query: 534 DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE 565
             MQ  G  PN++TF  VL AC+  G L  G+
Sbjct: 300 RQMQADGEIPNSVTFTNVLPACARIGFLRPGK 331


>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
          Length = 732

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 230/695 (33%), Positives = 386/695 (55%), Gaps = 28/695 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N    A+ +++C Q   ++    +H  V++ G   D++    L++ Y K   +  A  +F
Sbjct: 36  NEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGBIEVARLVF 95

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D++ E+  +++ T I GYT   +   ++ LF+ +       + +  ++ L     + + E
Sbjct: 96  DQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLE 155

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GLF 219
               + A V + G + +  V   LID ++ C  V+  RK+FD               G  
Sbjct: 156 GGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYM 215

Query: 220 NDCFE-EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            + F+ EA+  F +M  +G+KP+ F    VL +C  L+ +   +  H   +K   E + +
Sbjct: 216 QNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEF 275

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V   L+D+Y KS  + +A+++F+ M +++VI ++ MI  Y+  +   +A+ELF  MR   
Sbjct: 276 VKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRL 335

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
             P+  TFVS+L   A++  L+L  QIH L+++ G+  D+F  +AL+DVY+KC  ++++ 
Sbjct: 336 FPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDAR 395

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            +F E  +++ V WN M  GY Q  E  +A+ ++S +   +    E T+++++ A ++LA
Sbjct: 396 HVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLA 455

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           +L  G Q H   VK   D    V NAL+DMYAKCGSI +AR +F+     + V WN+MIS
Sbjct: 456 SLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMIS 515

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
            ++ HG + E L +F  M + G +PN +TFV VLSACS+ G +E G  +F SM   +GI+
Sbjct: 516 THAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSM-PGFGIK 574

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P  EHY  +VSLLGR+G L +A + IE +P +P+ ++WR+LL AC I  NVE+G+ +A+ 
Sbjct: 575 PGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEM 634

Query: 639 ILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRA 687
            +  +P+D  +++LLSNI+A    W                KEPG SWIE    V+ F A
Sbjct: 635 AISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIA 694

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVL 722
             T+H + ++I  +L+ L    + AGY+PD +A+L
Sbjct: 695 RXTTHREADMIGSVLDILIQHIKGAGYVPDATALL 729



 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 158/508 (31%), Positives = 267/508 (52%), Gaps = 19/508 (3%)

Query: 140 EAVGLFSTLHRE-GHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTAL 198
           EA+ +F  L R+ G   N F   + ++    +G  E    +   V + G D + +VGT+L
Sbjct: 19  EALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSL 78

Query: 199 IDAFSVCGCVEFARKVFDGL--------------FNDCFEE--ALNFFSQMRAVGFKPNN 242
           ID +S  G +E AR VFD L              +  C     +L  F+QMR     P+ 
Sbjct: 79  IDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDR 138

Query: 243 FTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEE 302
           +  + VL AC  L+ +   K  H   L+   EMD+ V   L+D YTK   +   R++F++
Sbjct: 139 YVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQ 198

Query: 303 MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG 362
           M  K++I W+ MI+ Y Q     +A++LF  M +    P+ F   SVL +C ++E L+ G
Sbjct: 199 MVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQG 258

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
            Q+H+  ++  L S+ FV N L+D+YAK   + ++ ++F    ++N +++N MI GY   
Sbjct: 259 RQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQ 318

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
            ++ +A+ +F +M     P + +T+ S+L   ASL ALE   Q+H L +K    +D+   
Sbjct: 319 EKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAG 378

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
           +ALID+Y+KC  + DAR VF+ MN+ + V WNAM  GY+ H  + E LK++  +Q    +
Sbjct: 379 SALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQK 438

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           PN  TF  +++A SN   L  G+ +   +V   G++ C     ++V +  + G +++A K
Sbjct: 439 PNEFTFAALITAASNLASLRHGQQFHNQLV-KMGLDFCPFVTNALVDMYAKCGSIEEARK 497

Query: 603 LIEGIPFQPSVMIWRALLGACIIHNNVE 630
           +     ++  V+ W +++     H   E
Sbjct: 498 MFNSSIWR-DVVCWNSMISTHAQHGEAE 524



 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 139/398 (34%), Positives = 227/398 (57%), Gaps = 3/398 (0%)

Query: 224 EEALNFFSQM-RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
           EEAL  F  + R  G  PN F  A V++AC  L  +      HG  +++ ++ D+YV  +
Sbjct: 18  EEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTS 77

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+D Y+K+G+I  AR +F+++ +K  + W+ +IA Y +   S  ++ELF +MR+  V P+
Sbjct: 78  LIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPD 137

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           ++   SVL AC+ +E L+ G QIH+ V+R G   DV V N L+D Y KC R++   +LF 
Sbjct: 138 RYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFD 197

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
           +   +N ++W TMI GY+Q     +AM +F +M            +SVL +C SL ALE 
Sbjct: 198 QMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQ 257

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G QVH  T+KAN + +  V N LIDMYAK   + DA+ VFD+M + N +S+NAMI GYS 
Sbjct: 258 GRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSS 317

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
               +E L++F  M+ R + P+ LTFV +L   ++   LE  +     ++   G+   + 
Sbjct: 318 QEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQ-IHGLIIKXGVSLDLF 376

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
             ++++ +  +  ++  A  + E +  +  +++W A+ 
Sbjct: 377 AGSALIDVYSKCSYVKDARHVFEEMN-EKDIVVWNAMF 413



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/265 (21%), Positives = 107/265 (40%), Gaps = 19/265 (7%)

Query: 45  TPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKL 104
           + + FS  + N  ++A  + +      L+     H Q++K G     F TN L+++Y K 
Sbjct: 430 STLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKC 489

Query: 105 NRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFL 164
             + +A K+F+    R+ + + + I  +    +  EA+G+F  + +EG + N   F A L
Sbjct: 490 GSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVL 549

Query: 165 KVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFE 224
                 G  E           L H  N+  G  +        CV         LF     
Sbjct: 550 SACSHAGXVE---------DGLNH-FNSMPGFGIKPGTEHYACVVSLLGRSGKLF----- 594

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           EA  F  +M     +P    +  +L AC     + + K A   A+ T  + D    + L 
Sbjct: 595 EAKEFIEKMP---IEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPK-DSGSYILLS 650

Query: 285 DLYTKSGEISNARRIFEEMPKKDVI 309
           +++   G  ++ +++ + M   +V+
Sbjct: 651 NIFASKGMWADVKKVRDRMDSSEVV 675


>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 221/554 (39%), Positives = 336/554 (60%), Gaps = 11/554 (1%)

Query: 263 SAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTD 322
           + H   ++     D   +  L+++Y+K G + +AR++F+EMP + ++ W+ M+  + Q  
Sbjct: 68  ACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNG 127

Query: 323 LSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSN 382
               A+ LF +M++   + ++FT  SV+ ACA    +    Q+H   ++  L S+VFV  
Sbjct: 128 DCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGT 187

Query: 383 ALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPA 442
           AL+DVYAKCG ++++  +F   P+R+ VTW++M+ GYVQ     +A+++F +     +  
Sbjct: 188 ALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEH 247

Query: 443 TEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVF 502
            + T SS L ACA+ AAL  G QV  ++ K     ++ V ++LIDMYAKCG I +A  VF
Sbjct: 248 NQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVF 307

Query: 503 DMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLE 562
             + + N V WNA++SG+S H  S E +  F+ MQQ G  PN++T++ VLSACS+ GL+E
Sbjct: 308 SSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVE 367

Query: 563 QGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           +G  YF  M+  + + P + HY+ MV +LGRAG L +A   I+ +PF  +  +W +LL +
Sbjct: 368 KGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLAS 427

Query: 623 CIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKA-----------ASKEP 671
           C I+ N+E+  ++A+H+ + EP +   HVLLSNIYA    WE+            A KE 
Sbjct: 428 CRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKAKKER 487

Query: 672 GLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKE 731
           G SWIE +  VH F  G+ +H  +  I   LE L  + +K GY       L DV E  K+
Sbjct: 488 GKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEESRKQ 547

Query: 732 RYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRF 791
             L  HSEKLAL F +  +P  +PIRI+KNLRIC DCH+ +K+ S I +REII+RD +RF
Sbjct: 548 ELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIVRDTNRF 607

Query: 792 HHFQDGCCSCGDFW 805
           HHF++G CSCG+FW
Sbjct: 608 HHFKNGYCSCGEFW 621



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 114/357 (31%), Positives = 192/357 (53%), Gaps = 20/357 (5%)

Query: 181 ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-----------------FNDCF 223
           A + ++G  ++      L++ +S CG VE ARK+FD +                   DC 
Sbjct: 71  AQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDC- 129

Query: 224 EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
           E+AL  F QM+  G   + FT + V+ AC     +   K  HG ALKT  + +++V  AL
Sbjct: 130 EKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTAL 189

Query: 284 LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
           LD+Y K G + +A  +FE MP++  + WS M+A Y Q +L  +A+ LF R +   +  NQ
Sbjct: 190 LDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQ 249

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
           FT  S L ACA    L  G Q+ ++  + G+ S++FV ++L+D+YAKCG +E +  +F+ 
Sbjct: 250 FTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSS 309

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
             ++N V WN ++ G+ +     +AMI F KM +  +   ++TY SVL AC+ L  +E G
Sbjct: 310 VEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKG 369

Query: 464 MQVHCLTVKA-NYDMDVVVANALIDMYAKCGSITDARLVFDMMN-DWNEVSWNAMIS 518
            +   L ++  N   +V+  + ++D+  + G + +A+   D M  D     W ++++
Sbjct: 370 RKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLA 426



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 187/366 (51%), Gaps = 29/366 (7%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           LQS  +N      M  H Q+++ G   D   +N+L+N+Y K   +  A KLFDEMP R+ 
Sbjct: 54  LQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSL 113

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +S+ T +  +T +    +A+ LF  + +EG   + F  ++     V    A  C CVF C
Sbjct: 114 VSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSS-----VVCACAAKC-CVFEC 167

Query: 183 ------VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FN 220
                   K   DSN FVGTAL+D ++ CG V+ A  VF+ +                 N
Sbjct: 168 KQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQN 227

Query: 221 DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
           + +EEAL  F + +A+G + N FT +  L AC     +   K     + KT    +++V 
Sbjct: 228 ELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVI 287

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
            +L+D+Y K G I  A  +F  + +K+V+ W+ +++ +++   S++A+  F +M+Q  + 
Sbjct: 288 SSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGIC 347

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLS-DVFVSNALMDVYAKCGRMENSVE 399
           PN  T++SVL AC+ +  ++ G +   L++RV  +S +V   + ++D+  + G +  + +
Sbjct: 348 PNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKD 407

Query: 400 LFAESP 405
                P
Sbjct: 408 FIDRMP 413



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 96/289 (33%), Positives = 164/289 (56%), Gaps = 6/289 (2%)

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           +R   V+  Q    S  +  A +EG+      H+ ++RVGL +D   SN LM++Y+KCG 
Sbjct: 42  IRATHVSELQHLLQSSARNRAAIEGM----ACHAQIIRVGLRADTITSNMLMNMYSKCGL 97

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           +E++ +LF E P R+ V+WNTM+  + Q G+  KA+++F +M +E    +E T SSV+ A
Sbjct: 98  VESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCA 157

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
           CA+   +    Q+H   +K   D +V V  AL+D+YAKCG + DA LVF+ M + ++V+W
Sbjct: 158 CAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTW 217

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA 573
           ++M++GY  + L  E L +F   Q  G   N  T    LSAC+    L +G+   +++  
Sbjct: 218 SSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQ-VQAVSC 276

Query: 574 NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
             GI   I   +S++ +  + G +++A  +   +  + +V++W A+L  
Sbjct: 277 KTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVE-EKNVVLWNAILSG 324


>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
          Length = 846

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 247/682 (36%), Positives = 373/682 (54%), Gaps = 40/682 (5%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKG----NCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           L+ C +   ++ A  +H  VLK      + + LF  N   +VY K +    A  +FDEMP
Sbjct: 71  LRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLF--NHAAHVYSKCSEFRAACGVFDEMP 128

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
           +RN  S+   I G T    F +    F  +   G   + FA++A ++  + +   EL   
Sbjct: 129 QRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKM 188

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-----------GLFNDCFE--- 224
           V A +   G  ++ FV T+L++ ++  G +E +  VF+            + + C     
Sbjct: 189 VHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGL 248

Query: 225 --EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
             EA + F +M+     PN +T   V KA   L  + + K    CA +   E ++ V  A
Sbjct: 249 HLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTA 308

Query: 283 LLDLYTKSGEISNARRIFEE--MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
           L+D+Y+K G + +AR +F+   +      PW+ MI+ Y+Q+  S +A+EL+ +M Q  + 
Sbjct: 309 LIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGIT 368

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL-LSDVFVSNALMDVYAKCGRMENSVE 399
            + +T+ SV  A A  + L  G  +H +V++ GL L  V V+NA+ D Y+KCG +E+  +
Sbjct: 369 SDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRK 428

Query: 400 LFAESPKRNHVTWNTMIVGYVQ--LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
           +F    +R+ V+W T++  Y Q  LGE  +A+  F  M EE     + T+SSVL +CASL
Sbjct: 429 VFDRMEERDIVSWTTLVTAYSQSSLGE--EALATFCLMREEGFAPNQFTFSSVLISCASL 486

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
             LE G QVH L  KA  D +  + +ALIDMYAKCGSIT+A  VFD +++ + VSW A+I
Sbjct: 487 CFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAII 546

Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
           SGY+ HGL  + L++F  M+  G + N +T + VL ACS+GG++E+G  YF+ M   YG+
Sbjct: 547 SGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGV 606

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQ 637
            P +EHY  ++ LLGR G LD A + I  +P +P+ M+W+ LLG C +H NVE+G ++A+
Sbjct: 607 VPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAAR 666

Query: 638 HILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFR 686
            IL   PE  AT+VLLSN Y    S+E   S           KEPG SWI  +G VH F 
Sbjct: 667 KILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFY 726

Query: 687 AGDTSHADMNIIRGMLEWLNMK 708
           +GD  H     I   LE L  K
Sbjct: 727 SGDQQHPQKKEIYVKLEELREK 748



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 148/492 (30%), Positives = 253/492 (51%), Gaps = 23/492 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +  +Y+  +QSCI  D L+    +H Q++ +G    +F +  LLN+Y KL  + D+  +F
Sbjct: 166 DKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVF 225

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           + M E N +S+   I G T +   +EA  LF  +       N +   +  K +  +    
Sbjct: 226 NMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVN 285

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
           +   V  C  +LG + N  VGTALID +S CG +  AR VFD  F               
Sbjct: 286 MGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISG 345

Query: 220 ---NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE-M 275
              + C +EAL  + QM   G   + +T+  V  A     +++  +  HG  LK   + M
Sbjct: 346 YSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLM 405

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
            + V  A+ D Y+K G + + R++F+ M ++D++ W+ ++  Y+Q+ L  +A+  FC MR
Sbjct: 406 VVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMR 465

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
           +   APNQFTF SVL +CA++  L+ G Q+H L+ + GL ++  + +AL+D+YAKCG + 
Sbjct: 466 EEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSIT 525

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
            + ++F +    + V+W  +I GY Q G V  A+ +F +M    + A  VT   VL AC+
Sbjct: 526 EAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACS 585

Query: 456 SLAALEPGMQVHCLTVKANYDM--DVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVS 512
               +E G+  +   ++  Y +  ++     +ID+  + G + DA   +  M  + NE+ 
Sbjct: 586 HGGMVEEGL-FYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMV 644

Query: 513 WNAMISGYSMHG 524
           W  ++ G  +HG
Sbjct: 645 WQTLLGGCRVHG 656



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 158/378 (41%), Gaps = 53/378 (14%)

Query: 22  NAWLRGLS----AQAALS--TQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTA 75
           NA + G S    +Q AL    Q C N  T+ +    S FN+ + + S         LQ  
Sbjct: 340 NAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKS---------LQFG 390

Query: 76  MTIHCQVLKKGNCLDLF---ATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGY 132
             +H  VLK G  LDL      N + + Y K   L D  K+FD M ER+ +S+ T +  Y
Sbjct: 391 RVVHGMVLKCG--LDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAY 448

Query: 133 TVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNA 192
           + SS   EA+  F  +  EG   N F F++ L    S+ + E    V   + K G D+  
Sbjct: 449 SQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEK 508

Query: 193 FVGTALIDAFSVCGCVEFARKVFDGLFN----------------DCFEEALNFFSQMRAV 236
            + +ALID ++ CG +  A KVFD + N                   E+AL  F +M   
Sbjct: 509 CIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELS 568

Query: 237 GFKPNNFTFAFVLKACL-------GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK 289
           G K N  T   VL AC        GL   +  +  +G       EM+ Y  +  +DL  +
Sbjct: 569 GIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYG----VVPEMEHYACI--IDLLGR 622

Query: 290 SGEISNARRIFEEMP-KKDVIPWSFMIAR---YAQTDLSIDAVELFCRMRQAFVAPNQFT 345
            G + +A     +MP + + + W  ++     +   +L   A      +R  + A     
Sbjct: 623 VGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLL 682

Query: 346 FVSVLQACATMEGLDLGN 363
             + ++  +  +GL L N
Sbjct: 683 SNTYIETGSYEDGLSLRN 700



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 80/176 (45%), Gaps = 4/176 (2%)

Query: 450 VLRACASLAALEPGMQVHCLTVKANY-DMDVVVA-NALIDMYAKCGSITDARLVFDMMND 507
           VLR CA   ++     VH L +K+N+ D D++V  N    +Y+KC     A  VFD M  
Sbjct: 70  VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 129

Query: 508 WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAY 567
            N  SW  MI G + HGL  +  K F  M   G  P+   +  ++ +C     LE G+  
Sbjct: 130 RNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMV 189

Query: 568 FKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGAC 623
              +V   G    I   TS++++  + G ++ +  +   +     V  W A++  C
Sbjct: 190 HAQIVMR-GFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVS-WNAMISGC 243


>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
          Length = 649

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 228/621 (36%), Positives = 335/621 (53%), Gaps = 69/621 (11%)

Query: 196 TALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGL 255
           T LI+ +S+    + AR VFD   N      + + S +RA   +   +  A  +  C+  
Sbjct: 87  THLINLYSLFHKCDLARSVFDSTPN---PSRILWNSMIRAYT-RSKQYNEALEMYYCM-- 140

Query: 256 DTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMI 315
                         K   E D+++   L+D+Y+K G++  AR +F++MPK+DV+ W+ MI
Sbjct: 141 ------------VEKGGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMI 188

Query: 316 ARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLL 375
           A  +Q++    A  +F +M                                       + 
Sbjct: 189 AGLSQSEDPYVARRVFDQM---------------------------------------VD 209

Query: 376 SDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKM 435
            D      +M  YA  G     +ELF +  K  +VTWN +I  Y+Q G   +A+  F +M
Sbjct: 210 QDDVSWGTMMAGYAHNGCFVEVLELF-DKMKLGNVTWNVIIAAYMQNGHAKEAISSFHQM 268

Query: 436 LEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSI 495
             E      VT+ SVL A A LAA   GM  H   ++  +  + +V N+LIDMYAKCG +
Sbjct: 269 RLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQL 328

Query: 496 TDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSAC 555
             +  +F+ M+  + VSWNAM+SGY++HG     + +F LMQ+   + ++++FV VLSAC
Sbjct: 329 DYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSAC 388

Query: 556 SNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMI 615
            + GL+E+G   F SM   Y I+P +EHY  MV LLGRAG  D+    I+ +P +P   +
Sbjct: 389 RHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGV 448

Query: 616 WRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-------- 667
           W ALLG+C +H+NV++G ++  H++  EP + A  V+LS+IYA +  W  A         
Sbjct: 449 WGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMND 508

Query: 668 ---SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRD 724
               K PG SW+E +  VH FR GD SH  +  +  +   L  K  K GY+PD S VL++
Sbjct: 509 LGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQN 568

Query: 725 VREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREII 784
           V E++KE +L+ HSE+LA+ FAL   PP S I+I+KNLR+C DCHT  K ISKI  R II
Sbjct: 569 VEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRII 628

Query: 785 IRDVHRFHHFQDGCCSCGDFW 805
           +RD  RFHHF+DG CSC D+W
Sbjct: 629 VRDATRFHHFEDGICSCNDYW 649



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 117/469 (24%), Positives = 196/469 (41%), Gaps = 74/469 (15%)

Query: 45  TPITFSVSEFNSHS---------YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATN 95
           T I  + SEF S S         Y   L SC     L   + IH Q++  G       T+
Sbjct: 32  TSIATAASEFPSLSSSTYTNYLHYPRLLSSC---KHLNPLLQIHAQIIVSGFKHHHSITH 88

Query: 96  VLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTL-HREGHE 154
            L+N+Y   ++   A  +FD  P  + I + + I+ YT S Q+ EA+ ++  +  + G E
Sbjct: 89  -LINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGGLE 147

Query: 155 LNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKV 214
            + F     + +   MG  +    VF  + K     +     A+I   S       AR+V
Sbjct: 148 RDVFIGAGLVDMYSKMGDLKRAREVFDKMPK----RDVVAWNAMIAGLSQSEDPYVARRV 203

Query: 215 FDGLF----------------NDCF------------------------------EEALN 228
           FD +                 N CF                              +EA++
Sbjct: 204 FDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVTWNVIIAAYMQNGHAKEAIS 263

Query: 229 FFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYT 288
            F QMR   F PN+ TF  VL A   L   R   + H C ++  +  +  V  +L+D+Y 
Sbjct: 264 SFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYA 323

Query: 289 KSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVS 348
           K G++  + ++F EM  KD + W+ M++ YA       A+ LF  M+++ V  +  +FVS
Sbjct: 324 KCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVS 383

Query: 349 VLQACATMEGLDLGNQI-HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-K 406
           VL AC     ++ G +I HS+  +  +  D+     ++D+  + G  + ++      P +
Sbjct: 384 VLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVE 443

Query: 407 RNHVTWNTMIV-----GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
            +   W  ++        V+LGEV    ++    LE + PA  V  SS+
Sbjct: 444 PDAGVWGALLGSCRMHSNVKLGEVALDHLV---KLEPRNPAHFVVLSSI 489



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 94/474 (19%), Positives = 173/474 (36%), Gaps = 97/474 (20%)

Query: 79  HCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTI--------------- 123
           +C V K G   D+F    L+++Y K+  L  A ++FD+MP+R+ +               
Sbjct: 138 YCMVEKGGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDP 197

Query: 124 ----------------SFVTTIQGYTVSSQFVEAVGLF---------------------- 145
                           S+ T + GY  +  FVE + LF                      
Sbjct: 198 YVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVTWNVIIAAYMQNGH 257

Query: 146 -----STLHR---EGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
                S+ H+   E    N   F + L     +          AC+ ++G  SN  VG +
Sbjct: 258 AKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNS 317

Query: 198 LIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPN 241
           LID ++ CG ++++ K+F+ +                 +   + A+  FS M+    + +
Sbjct: 318 LIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQID 377

Query: 242 NFTFAFVLKACLGLDTIRVAKSA-HGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIF 300
           + +F  VL AC     +   +   H  + K   + DL     ++DL  ++G         
Sbjct: 378 SVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFI 437

Query: 301 EEMP-KKDVIPWSFMIAR-YAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           + MP + D   W  ++      +++ +  V L   ++     P  F  +S + A  +   
Sbjct: 438 KVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYA-QSGRW 496

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRN------HVTW 412
            D G +  S +  +GL      S            ++N V  F    K +      H+ W
Sbjct: 497 ADAG-KARSKMNDLGLKKTPGCSWV---------ELKNKVHAFRVGDKSHPQLESMHLLW 546

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
           NT++    ++G V     +   + EE       ++S  L    +L    PG  +
Sbjct: 547 NTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTI 600



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/252 (19%), Positives = 104/252 (41%), Gaps = 24/252 (9%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           NS ++ + L +       +  M  H  +++ G   +    N L+++Y K  +L  + KLF
Sbjct: 276 NSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLF 335

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           +EM  ++T+S+   + GY V      A+ LFS +     +++  +F + L      G  E
Sbjct: 336 NEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVE 395

Query: 175 LCPCVFACV---YKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFS 231
               +F  +   Y +  D   +    ++D     G                F+E L F  
Sbjct: 396 EGRKIFHSMSDKYHIKPDLEHY--ACMVDLLGRAG---------------LFDETLGF-- 436

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
            ++ +  +P+   +  +L +C     +++ + A    +K       +  V L  +Y +SG
Sbjct: 437 -IKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHF-VVLSSIYAQSG 494

Query: 292 EISNARRIFEEM 303
             ++A +   +M
Sbjct: 495 RWADAGKARSKM 506


>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 609

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 226/584 (38%), Positives = 332/584 (56%), Gaps = 27/584 (4%)

Query: 245 FAFVLKACLGL-----------DTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
            +F+L+ C+ L             I      HG   +   + + ++  AL+ L   S  +
Sbjct: 30  LSFILRKCISLVQLCGSSQSKLKQIHAFSIRHGVPPQNP-DFNKHLIFALVSL---SAPM 85

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF-VAPNQFTFVSVLQA 352
           S A +IF ++   ++  W+ MI  +A+++    AVELF +M  A  + P+  TF  + +A
Sbjct: 86  SFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKA 145

Query: 353 CATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTW 412
            A +  + LG  IHS+VVR G  S  FV N+L+ +Y+  G  E++ ++F     R+ V W
Sbjct: 146 VAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAW 205

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
           N++I G+   G   +A+ ++ +M  E V     T  S+L AC  L AL  G +VH   VK
Sbjct: 206 NSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVK 265

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
                +   +NAL+D+Y+KCG+  DA+ VFD M + + VSW ++I G +++GL  E LK+
Sbjct: 266 VGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKL 325

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
           F  ++++G +P+ +TFVGVL ACS+ G+L++G  YF+ M   YGI P IEH+  MV LL 
Sbjct: 326 FGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLC 385

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVL 652
           RAG +  A   I  +P  P+ +IWR LLGAC IH ++E+G ++   I   E       VL
Sbjct: 386 RAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVL 445

Query: 653 LSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGM 701
           LSN+YA  R W            K   K PG S +E +  V+ F  GD SH        M
Sbjct: 446 LSNLYASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAM 505

Query: 702 LEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKN 761
           L  +    +  GY+P    VL D+ E+EKE  L  H+EK+A+AF L   PP +PIRI+KN
Sbjct: 506 LAKITQLLKIEGYVPRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKN 565

Query: 762 LRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           LR+C DCH AIK+ISK+ +REII+RD  RFHHF+DG CSC D+W
Sbjct: 566 LRVCADCHLAIKLISKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 162/303 (53%), Gaps = 5/303 (1%)

Query: 226 ALNFFSQMRAVG-FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           A+  FSQM A     P+  TF F+ KA   L  + + +  H   ++  ++   +V  +L+
Sbjct: 119 AVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLV 178

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
            +Y+  G   +A ++FE M  +D + W+ +I  +A   +  +A+ L+  M    V P+ F
Sbjct: 179 HMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGF 238

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           T VS+L AC  +  L LG ++H  +V+VGL+ +   SNAL+D+Y+KCG   ++ ++F E 
Sbjct: 239 TMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEM 298

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
            +R+ V+W ++IVG    G   +A+ +F ++  + +  +E+T+  VL AC+    L+ G 
Sbjct: 299 EERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGF 358

Query: 465 QVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYS 521
             +   +K  Y +   + +   ++D+  + G + DA   + +M    N V W  ++   +
Sbjct: 359 N-YFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACT 417

Query: 522 MHG 524
           +HG
Sbjct: 418 IHG 420



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 173/350 (49%), Gaps = 34/350 (9%)

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELN-----PFAFTAFL 164
           A ++F+++   N  ++ T I+G+  S     AV LFS +H     L      PF F A  
Sbjct: 88  AAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVA 147

Query: 165 KVL-VSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----- 218
           K++ VS+G       + + V + G DS  FV  +L+  +SV G  E A +VF+ +     
Sbjct: 148 KLMDVSLGEG-----IHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDR 202

Query: 219 -----------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGC 267
                       N    EAL  + +M + G +P+ FT   +L AC+ L  + + +  H  
Sbjct: 203 VAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMY 262

Query: 268 ALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDA 327
            +K     + + + ALLDLY+K G   +A+++F+EM ++ V+ W+ +I   A   L  +A
Sbjct: 263 MVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEA 322

Query: 328 VELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMD 386
           ++LF  + +  + P++ TFV VL AC+    LD G N    +    G+L  +     ++D
Sbjct: 323 LKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVD 382

Query: 387 VYAKCGRMENSVELFAESP-KRNHVTWNTM-----IVGYVQLGEVGKAMI 430
           +  + G++ ++ +     P   N V W T+     I G+++LGEV +A I
Sbjct: 383 LLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEI 432



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/325 (23%), Positives = 133/325 (40%), Gaps = 44/325 (13%)

Query: 22  NAWLRGL------SAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTA 75
           N  +RG       S    L +Q  + S+  P        ++H++    ++  +  D+   
Sbjct: 104 NTMIRGFAESENPSPAVELFSQMHAASSILP--------DTHTFPFLFKAVAKLMDVSLG 155

Query: 76  MTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVS 135
             IH  V++ G     F  N L+++Y        A ++F+ M  R+ +++ + I G+ ++
Sbjct: 156 EGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALN 215

Query: 136 SQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVG 195
               EA+ L+  +  EG E + F   + L   V +G   L   V   + K+G   N    
Sbjct: 216 GMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHAS 275

Query: 196 TALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFK 239
            AL+D +S CG    A+KVFD +                 N    EAL  F ++   G K
Sbjct: 276 NALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLK 335

Query: 240 PNNFTFAFVLKACL-------GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           P+  TF  VL AC        G +  R  K  +G   +  +         ++DL  ++G+
Sbjct: 336 PSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHG------CMVDLLCRAGK 389

Query: 293 ISNARRIFEEMP-KKDVIPWSFMIA 316
           + +A      MP   + + W  ++ 
Sbjct: 390 VGDAYDYIRNMPVPPNAVIWRTLLG 414


>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Vitis vinifera]
          Length = 594

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 221/554 (39%), Positives = 336/554 (60%), Gaps = 11/554 (1%)

Query: 263 SAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTD 322
           + H   ++     D   +  L+++Y+K G + +AR++F+EMP + ++ W+ M+  + Q  
Sbjct: 41  ACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNG 100

Query: 323 LSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSN 382
               A+ LF +M++   + ++FT  SV+ ACA    +    Q+H   ++  L S+VFV  
Sbjct: 101 DCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGT 160

Query: 383 ALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPA 442
           AL+DVYAKCG ++++  +F   P+R+ VTW++M+ GYVQ     +A+++F +     +  
Sbjct: 161 ALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEH 220

Query: 443 TEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVF 502
            + T SS L ACA+ AAL  G QV  ++ K     ++ V ++LIDMYAKCG I +A  VF
Sbjct: 221 NQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVF 280

Query: 503 DMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLE 562
             + + N V WNA++SG+S H  S E +  F+ MQQ G  PN++T++ VLSACS+ GL+E
Sbjct: 281 SSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVE 340

Query: 563 QGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           +G  YF  M+  + + P + HY+ MV +LGRAG L +A   I+ +PF  +  +W +LL +
Sbjct: 341 KGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLAS 400

Query: 623 CIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKA-----------ASKEP 671
           C I+ N+E+  ++A+H+ + EP +   HVLLSNIYA    WE+            A KE 
Sbjct: 401 CRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKAKKER 460

Query: 672 GLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKE 731
           G SWIE +  VH F  G+ +H  +  I   LE L  + +K GY       L DV E  K+
Sbjct: 461 GKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEESRKQ 520

Query: 732 RYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRF 791
             L  HSEKLAL F +  +P  +PIRI+KNLRIC DCH+ +K+ S I +REII+RD +RF
Sbjct: 521 ELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIVRDTNRF 580

Query: 792 HHFQDGCCSCGDFW 805
           HHF++G CSCG+FW
Sbjct: 581 HHFKNGYCSCGEFW 594



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 114/357 (31%), Positives = 192/357 (53%), Gaps = 20/357 (5%)

Query: 181 ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-----------------FNDCF 223
           A + ++G  ++      L++ +S CG VE ARK+FD +                   DC 
Sbjct: 44  AQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDC- 102

Query: 224 EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
           E+AL  F QM+  G   + FT + V+ AC     +   K  HG ALKT  + +++V  AL
Sbjct: 103 EKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTAL 162

Query: 284 LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
           LD+Y K G + +A  +FE MP++  + WS M+A Y Q +L  +A+ LF R +   +  NQ
Sbjct: 163 LDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQ 222

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
           FT  S L ACA    L  G Q+ ++  + G+ S++FV ++L+D+YAKCG +E +  +F+ 
Sbjct: 223 FTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSS 282

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
             ++N V WN ++ G+ +     +AMI F KM +  +   ++TY SVL AC+ L  +E G
Sbjct: 283 VEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKG 342

Query: 464 MQVHCLTVKA-NYDMDVVVANALIDMYAKCGSITDARLVFDMMN-DWNEVSWNAMIS 518
            +   L ++  N   +V+  + ++D+  + G + +A+   D M  D     W ++++
Sbjct: 343 RKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLA 399



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 187/366 (51%), Gaps = 29/366 (7%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           LQS  +N      M  H Q+++ G   D   +N+L+N+Y K   +  A KLFDEMP R+ 
Sbjct: 27  LQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSL 86

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +S+ T +  +T +    +A+ LF  + +EG   + F  ++     V    A  C CVF C
Sbjct: 87  VSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSS-----VVCACAAKC-CVFEC 140

Query: 183 ------VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FN 220
                   K   DSN FVGTAL+D ++ CG V+ A  VF+ +                 N
Sbjct: 141 KQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQN 200

Query: 221 DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
           + +EEAL  F + +A+G + N FT +  L AC     +   K     + KT    +++V 
Sbjct: 201 ELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVI 260

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
            +L+D+Y K G I  A  +F  + +K+V+ W+ +++ +++   S++A+  F +M+Q  + 
Sbjct: 261 SSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGIC 320

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLS-DVFVSNALMDVYAKCGRMENSVE 399
           PN  T++SVL AC+ +  ++ G +   L++RV  +S +V   + ++D+  + G +  + +
Sbjct: 321 PNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKD 380

Query: 400 LFAESP 405
                P
Sbjct: 381 FIDRMP 386



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 96/289 (33%), Positives = 164/289 (56%), Gaps = 6/289 (2%)

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           +R   V+  Q    S  +  A +EG+      H+ ++RVGL +D   SN LM++Y+KCG 
Sbjct: 15  IRATHVSELQHLLQSSARNRAAIEGM----ACHAQIIRVGLRADTITSNMLMNMYSKCGL 70

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           +E++ +LF E P R+ V+WNTM+  + Q G+  KA+++F +M +E    +E T SSV+ A
Sbjct: 71  VESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCA 130

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
           CA+   +    Q+H   +K   D +V V  AL+D+YAKCG + DA LVF+ M + ++V+W
Sbjct: 131 CAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTW 190

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA 573
           ++M++GY  + L  E L +F   Q  G   N  T    LSAC+    L +G+   +++  
Sbjct: 191 SSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQ-VQAVSC 249

Query: 574 NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
             GI   I   +S++ +  + G +++A  +   +  + +V++W A+L  
Sbjct: 250 KTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVE-EKNVVLWNAILSG 297


>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
 gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
          Length = 627

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 237/629 (37%), Positives = 351/629 (55%), Gaps = 49/629 (7%)

Query: 224 EEALNFFSQMRAVGFKPNNFTFAFVLKACL----GLDTIRVAKSAHGCALKTCYEMDLYV 279
           E+A+  +++M A G +P+ +TF  +LKA      G  +   A++ H   ++     + +V
Sbjct: 1   EDAVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHV 60

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
           A +L+  YT  G+ + AR +  E      + W+ +I+ + +     ++   F  M +A  
Sbjct: 61  ASSLVAAYTAGGDGAAARALVGECDTP--VAWNALISGHNRGGRFGESCGSFVDMARAGA 118

Query: 340 APNQFTFVSVLQACAT-MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC------- 391
           AP   T+VSVL AC      + LG Q+H  VV  G+L D+ V NAL+D+YA+C       
Sbjct: 119 APTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAW 178

Query: 392 ------------------------GRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK 427
                                   G+++ + +LF   P+R+ V+W  MI GYV      +
Sbjct: 179 KVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFRE 238

Query: 428 AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALID 487
           A+ MF +M    V A E T  SV+ ACA L ALE G  V     +    MD  V NALID
Sbjct: 239 ALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALID 298

Query: 488 MYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLT 547
           MY+KCGSI  A  VF  M+  ++ +W A+I G +++G   E +++F  M +    P+ +T
Sbjct: 299 MYSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVT 358

Query: 548 FVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGI 607
           F+GVL+AC++ GL+++G  +F SM+  Y I P + HY  ++ LLGRAG + +A   I+ +
Sbjct: 359 FIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQM 418

Query: 608 PFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW---- 663
           P  P+  IW  LL AC +H N EIG L A+ +L+ +PE+   ++LLSNIYA    W    
Sbjct: 419 PMTPNSTIWGTLLAACRVHGNSEIGELVAERLLELDPENSMVYILLSNIYAKCNRWEDVR 478

Query: 664 -------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIP 716
                  EK   KEPG S IE  G++H F AGD SH     I   LE +       GY P
Sbjct: 479 RLRHAIMEKGIKKEPGCSLIEMDGIIHEFVAGDQSHPMSKEIYSKLESIISDLNNVGYFP 538

Query: 717 DLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIIS 776
           D++ V  +V E EK++ L+ HSEKLA+AFAL    P++ IRI+KNLR+C+DCH AIK+IS
Sbjct: 539 DVTEVFVEVAEKEKKKVLYWHSEKLAIAFALLSSKPNTVIRIVKNLRMCLDCHNAIKLIS 598

Query: 777 KIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           ++  RE+++RD  RFHHF+ G CSC D+W
Sbjct: 599 RLYGREVVVRDRTRFHHFRHGFCSCKDYW 627



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 91/394 (23%), Positives = 163/394 (41%), Gaps = 72/394 (18%)

Query: 40  SNSTTTPITFSVSEFNSHSYATSLQSCIQND-DLQTAMTIHCQVLKKGNCLDLFATNVLL 98
           + +  TP+T          Y + L +C +   D+   M +H +V+  G   DL   N L+
Sbjct: 116 AGAAPTPVT----------YVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALV 165

Query: 99  NVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPF 158
           ++Y +   +  A K+FD M  R+ +S+ + + G     Q  EA  LF  +          
Sbjct: 166 DMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERD------ 219

Query: 159 AFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL 218
                     ++ W                       TA+ID +     V  AR      
Sbjct: 220 ----------TVSW-----------------------TAMIDGY-----VWAAR------ 235

Query: 219 FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
               F EAL  F +M+      + FT   V+ AC  L  + + +       +   +MD +
Sbjct: 236 ----FREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAF 291

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V  AL+D+Y+K G I  A  +F+ M  +D   W+ +I   A      +A+E+F RM +  
Sbjct: 292 VGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVS 351

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIH-SLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
             P++ TF+ VL AC     +D G +   S++    +  +V     ++D+  + G++  +
Sbjct: 352 ETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEA 411

Query: 398 VELFAESP-KRNHVTWNTMIV-----GYVQLGEV 425
           ++   + P   N   W T++      G  ++GE+
Sbjct: 412 LDTIDQMPMTPNSTIWGTLLAACRVHGNSEIGEL 445



 Score = 43.5 bits (101), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 55/260 (21%), Positives = 99/260 (38%), Gaps = 23/260 (8%)

Query: 50  SVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD 109
           S  EF   S  T+   C Q   L+    +   + ++G  +D F  N L+++Y K   +  
Sbjct: 252 SADEFTMVSVITA---CAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIER 308

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A  +F  M  R+  ++   I G  V+    EA+ +F  + R     +   F   L     
Sbjct: 309 ALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLT---- 364

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN-DCFEEALN 228
                      AC +    D       ++I+A+++   V     + D L       EAL+
Sbjct: 365 -----------ACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALD 413

Query: 229 FFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYT 288
              QM      PN+  +  +L AC       + +      L+   E  + V + L ++Y 
Sbjct: 414 TIDQMP---MTPNSTIWGTLLAACRVHGNSEIGELVAERLLELDPENSM-VYILLSNIYA 469

Query: 289 KSGEISNARRIFEEMPKKDV 308
           K     + RR+   + +K +
Sbjct: 470 KCNRWEDVRRLRHAIMEKGI 489


>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
          Length = 714

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 207/574 (36%), Positives = 334/574 (58%), Gaps = 15/574 (2%)

Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
           +  F + +C    ++    + H   +K+    D ++   L+ +Y K G   +A+R+F+EM
Sbjct: 144 SLVFAISSC---TSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEM 200

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMR-QAFVAPNQFTFVSVLQACATMEGLDLG 362
           P +D++ W+ +++  +        +  FCRMR ++   PN+ T +SV+ ACA M  LD G
Sbjct: 201 PNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEG 260

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
             +H +VV++G+     V N+L+++Y K G ++ + +LF E P R+ V+WN+M+V +   
Sbjct: 261 KSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHN 320

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
           G   K M +F+ M    +   + T  ++LRAC           +H    +  ++ D+++A
Sbjct: 321 GYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIA 380

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
            AL+++YAK G +  +  +F+ + D + ++W AM++GY++H    E +K+FDLM + G  
Sbjct: 381 TALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVE 440

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
            +++TF  +LSACS+ GL+E+G+ YF+ M   Y +EP ++HY+ MV LLGR+G L+ A +
Sbjct: 441 VDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYE 500

Query: 603 LIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARS 662
           LI+ +P +PS  +W ALLGAC ++ NVE+G+  A+ +L  +P D   +++LSNIY+ A  
Sbjct: 501 LIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGL 560

Query: 663 W-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRK 711
           W           E+  ++ PG S+IE+   +H F  GD  H   + I   LE L  K  +
Sbjct: 561 WRXASKVRXLMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIXE 620

Query: 712 AGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTA 771
           AG  P    VL D+ E+ K   +  HSEKLA+AF L       P+ I KNLRIC DCH+ 
Sbjct: 621 AGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHST 680

Query: 772 IKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            K  S + +R IIIRD  RFHHF DG CSC D+W
Sbjct: 681 AKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 714



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 190/411 (46%), Gaps = 43/411 (10%)

Query: 40  SNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLN 99
           ++S    + F++S   S SY ++               IH +V+K  N  D F  + L++
Sbjct: 138 ADSIVQSLVFAISSCTSVSYCSA---------------IHARVIKSLNYSDGFIGDRLVS 182

Query: 100 VYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHRE-GHELNPF 158
           +Y KL    DA +LFDEMP R+ +S+ + + G +        +  F  +  E G + N  
Sbjct: 183 MYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEV 242

Query: 159 AFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL 218
              + +     MG  +    +   V KLG    A V  +LI+ +   G ++ A ++F+ +
Sbjct: 243 TLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEM 302

Query: 219 ----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAK 262
                            N   E+ ++ F+ M+  G  P+  T   +L+AC      R A+
Sbjct: 303 PVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAE 362

Query: 263 SAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTD 322
           S H    +  +  D+ +A ALL+LY K G ++ +  IFEE+  +D I W+ M+A YA   
Sbjct: 363 SIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHA 422

Query: 323 LSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN---QIHSLVVRVGLLSDVF 379
              +A++LF  M +  V  +  TF  +L AC+    ++ G    +I S V RV    D +
Sbjct: 423 CGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHY 482

Query: 380 VSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTM-----IVGYVQLGE 424
             + ++D+  + GR+E++ EL    P + +   W  +     + G V+LG+
Sbjct: 483 --SCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGK 531



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/302 (21%), Positives = 129/302 (42%), Gaps = 23/302 (7%)

Query: 22  NAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQ 81
           N+ + GLS +  L    C N+     T S  + N  +  + + +C     L    ++H  
Sbjct: 209 NSLMSGLSGRGYLGA--CLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGV 266

Query: 82  VLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEA 141
           V+K G        N L+N+Y KL  L  A++LF+EMP R+ +S+ + +  +  +    + 
Sbjct: 267 VVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKG 326

Query: 142 VGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDA 201
           + LF+ + R G   +     A L+     G       + A +++ G +++  + TAL++ 
Sbjct: 327 MDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNL 386

Query: 202 FSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTF 245
           ++  G +  +  +F+ +                 + C  EA+  F  M   G + ++ TF
Sbjct: 387 YAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTF 446

Query: 246 AFVLKACLGLDTIRVAKSAHGC---ALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEE 302
             +L AC     +   K          +    +D Y    ++DL  +SG + +A  + + 
Sbjct: 447 THLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHY--SCMVDLLGRSGRLEDAYELIKS 504

Query: 303 MP 304
           MP
Sbjct: 505 MP 506


>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g21065-like [Cucumis sativus]
          Length = 609

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 225/584 (38%), Positives = 332/584 (56%), Gaps = 27/584 (4%)

Query: 245 FAFVLKACLGL-----------DTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
            +F+L+ C+ L             I      HG   +   + + ++  AL+ L   S  +
Sbjct: 30  LSFILRKCISLVQLCGSSQSKLKQIHAFSIRHGVPPQNP-DFNKHLIFALVSL---SAPM 85

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF-VAPNQFTFVSVLQA 352
           S A +IF ++   ++  W+ MI  +A+++    AVELF +M  A  + P+  TF  + +A
Sbjct: 86  SFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKA 145

Query: 353 CATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTW 412
            A +  + LG  IHS+VVR G  S  FV N+L+ +Y+  G + ++ ++F     R+ V W
Sbjct: 146 VAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAW 205

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
           N++I G+   G   +A+ ++ +M  E V     T  S+L AC  L AL  G +VH   VK
Sbjct: 206 NSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVK 265

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
                +   +NAL+D+Y+KCG+  DA+ VFD M + + VSW ++I G +++GL  E LK+
Sbjct: 266 VGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKL 325

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
           F  ++++G +P+ +TFVGVL ACS+ G+L++G  YF+ M   YGI P IEH+  MV LL 
Sbjct: 326 FGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLC 385

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVL 652
           RAG +  A   I  +P  P+ +IWR LLGAC IH ++E+G ++   I   E       VL
Sbjct: 386 RAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVL 445

Query: 653 LSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGM 701
           LSN+YA  R W            K   K PG S +E +  V+ F  GD SH        M
Sbjct: 446 LSNLYASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAM 505

Query: 702 LEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKN 761
           L  +    +  GY+P    VL D+ E+EKE  L  H+EK+A+AF L   PP +PIRI+KN
Sbjct: 506 LAKITQLLKIEGYVPRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKN 565

Query: 762 LRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           LR+C DCH AIK+ISK+ +REII+RD  RFHHF+DG CSC D+W
Sbjct: 566 LRVCADCHLAIKLISKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 163/303 (53%), Gaps = 5/303 (1%)

Query: 226 ALNFFSQMRAVG-FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           A+  FSQM A     P+  TF F+ KA   L  + + +  H   ++  ++   +V  +L+
Sbjct: 119 AVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLV 178

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
            +Y+  G + +A ++FE M  +D + W+ +I  +A   +  +A+ L+  M    V P+ F
Sbjct: 179 HMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGF 238

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           T VS+L AC  +  L LG ++H  +V+VGL+ +   SNAL+D+Y+KCG   ++ ++F E 
Sbjct: 239 TMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEM 298

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
            +R+ V+W ++IVG    G   +A+ +F ++  + +  +E+T+  VL AC+    L+ G 
Sbjct: 299 EERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGF 358

Query: 465 QVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYS 521
             +   +K  Y +   + +   ++D+  + G + DA   + +M    N V W  ++   +
Sbjct: 359 N-YFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACT 417

Query: 522 MHG 524
           +HG
Sbjct: 418 IHG 420



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 173/350 (49%), Gaps = 34/350 (9%)

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELN-----PFAFTAFL 164
           A ++F+++   N  ++ T I+G+  S     AV LFS +H     L      PF F A  
Sbjct: 88  AAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVA 147

Query: 165 KVL-VSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----- 218
           K++ VS+G       + + V + G DS  FV  +L+  +SV G +  A +VF+ +     
Sbjct: 148 KLMDVSLGEG-----IHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDR 202

Query: 219 -----------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGC 267
                       N    EAL  + +M + G +P+ FT   +L AC+ L  + + +  H  
Sbjct: 203 VAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMY 262

Query: 268 ALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDA 327
            +K     + + + ALLDLY+K G   +A+++F+EM ++ V+ W+ +I   A   L  +A
Sbjct: 263 MVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEA 322

Query: 328 VELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMD 386
           ++LF  + +  + P++ TFV VL AC+    LD G N    +    G+L  +     ++D
Sbjct: 323 LKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVD 382

Query: 387 VYAKCGRMENSVELFAESP-KRNHVTWNTM-----IVGYVQLGEVGKAMI 430
           +  + G++ ++ +     P   N V W T+     I G+++LGEV +A I
Sbjct: 383 LLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEI 432



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 77/325 (23%), Positives = 135/325 (41%), Gaps = 44/325 (13%)

Query: 22  NAWLRGL------SAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTA 75
           N  +RG       S    L +Q  + S+  P        ++H++    ++  +  D+   
Sbjct: 104 NTMIRGFAESENPSPAVELFSQMHAASSILP--------DTHTFPFLFKAVAKLMDVSLG 155

Query: 76  MTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVS 135
             IH  V++ G     F  N L+++Y  L  L  A ++F+ M  R+ +++ + I G+ ++
Sbjct: 156 EGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALN 215

Query: 136 SQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVG 195
               EA+ L+  +  EG E + F   + L   V +G   L   V   + K+G   N    
Sbjct: 216 GMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHAS 275

Query: 196 TALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFK 239
            AL+D +S CG    A+KVFD +                 N    EAL  F ++   G K
Sbjct: 276 NALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLK 335

Query: 240 PNNFTFAFVLKACL-------GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           P+  TF  VL AC        G +  R  K  +G   +  +         ++DL  ++G+
Sbjct: 336 PSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHG------CMVDLLCRAGK 389

Query: 293 ISNARRIFEEMP-KKDVIPWSFMIA 316
           + +A      MP   + + W  ++ 
Sbjct: 390 VGDAYDYIRNMPVPPNAVIWRTLLG 414


>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
           [Arabidopsis thaliana]
 gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g37380, chloroplastic; Flags: Precursor
 gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
 gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
 gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
           [Arabidopsis thaliana]
          Length = 632

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 215/563 (38%), Positives = 328/563 (58%), Gaps = 48/563 (8%)

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y   G+I ++  +F +    D+  ++  I   +   L   A  L+ ++  + + PN+FTF
Sbjct: 74  YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
            S+L++C+T  G      IH+ V++ GL  D +V+  L+DVYAK G + ++ ++F   P+
Sbjct: 134 SSLLKSCSTKSG----KLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPE 189

Query: 407 R-------------------------------NHVTWNTMIVGYVQLGEVGKAMIMFSKM 435
           R                               + V+WN MI GY Q G    A+++F K+
Sbjct: 190 RSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL 249

Query: 436 LEEQVPAT-EVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGS 494
           L E  P   E+T  + L AC+ + ALE G  +H     +   ++V V   LIDMY+KCGS
Sbjct: 250 LAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGS 309

Query: 495 ITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ-RGWRPNNLTFVGVLS 553
           + +A LVF+     + V+WNAMI+GY+MHG S + L++F+ MQ   G +P ++TF+G L 
Sbjct: 310 LEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQ 369

Query: 554 ACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSV 613
           AC++ GL+ +G   F+SM   YGI+P IEHY  +VSLLGRAG L +A + I+ +      
Sbjct: 370 ACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADS 429

Query: 614 MIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS----- 668
           ++W ++LG+C +H +  +G+  A++++    ++   +VLLSNIYA    +E  A      
Sbjct: 430 VLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLM 489

Query: 669 ------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVL 722
                 KEPG+S IE +  VH FRAGD  H+    I  ML  ++ + +  GY+P+ + VL
Sbjct: 490 KEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVL 549

Query: 723 RDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQRE 782
           +D+ E EKE+ L VHSE+LA+A+ L    P SP++I KNLR+C DCHT  K+ISKI  R+
Sbjct: 550 QDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRK 609

Query: 783 IIIRDVHRFHHFQDGCCSCGDFW 805
           I++RD +RFHHF DG CSCGDFW
Sbjct: 610 IVMRDRNRFHHFTDGSCSCGDFW 632



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 96/371 (25%), Positives = 174/371 (46%), Gaps = 54/371 (14%)

Query: 189 DSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFV 248
           D + F+ TA I+  S+               N   ++A   + Q+ +    PN FTF+ +
Sbjct: 92  DPDLFLFTAAINTASI---------------NGLKDQAFLLYVQLLSSEINPNEFTFSSL 136

Query: 249 LKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP---- 304
           LK+C    + +  K  H   LK    +D YVA  L+D+Y K G++ +A+++F+ MP    
Sbjct: 137 LKSC----STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSL 192

Query: 305 ---------------------------KKDVIPWSFMIARYAQTDLSIDAVELFCR-MRQ 336
                                      ++D++ W+ MI  YAQ     DA+ LF + + +
Sbjct: 193 VSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAE 252

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
               P++ T V+ L AC+ +  L+ G  IH  V    +  +V V   L+D+Y+KCG +E 
Sbjct: 253 GKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEE 312

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE-EQVPATEVTYSSVLRACA 455
           +V +F ++P+++ V WN MI GY   G    A+ +F++M     +  T++T+   L+ACA
Sbjct: 313 AVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACA 372

Query: 456 SLAALEPGMQV-HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN-DWNEVSW 513
               +  G+++   +  +      +     L+ +  + G +  A      MN D + V W
Sbjct: 373 HAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLW 432

Query: 514 NAMISGYSMHG 524
           ++++    +HG
Sbjct: 433 SSVLGSCKLHG 443



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 87/387 (22%), Positives = 155/387 (40%), Gaps = 61/387 (15%)

Query: 68  QNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNV-----YVKLNRLPDATKLFDEMPERNT 122
           ++  +   + IH  +L+    L L     +LN+     Y    ++  +  LF +  + + 
Sbjct: 38  KSQSVDEVLQIHAAILRHN--LLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDL 95

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
             F   I   +++    +A  L+  L       N F F++ LK   +         +   
Sbjct: 96  FLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKSGK----LIHTH 151

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-------------------------- 216
           V K G   + +V T L+D ++  G V  A+KVFD                          
Sbjct: 152 VLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAA 211

Query: 217 -GLFNDCFE--------------------EALNFFSQMRAVGF-KPNNFTFAFVLKACLG 254
             LF+   E                    +AL  F ++ A G  KP+  T    L AC  
Sbjct: 212 RALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQ 271

Query: 255 LDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFM 314
           +  +   +  H     +   +++ V   L+D+Y+K G +  A  +F + P+KD++ W+ M
Sbjct: 272 IGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAM 331

Query: 315 IARYAQTDLSIDAVELFCRMRQ-AFVAPNQFTFVSVLQACATMEGLDLGNQI-HSLVVRV 372
           IA YA    S DA+ LF  M+    + P   TF+  LQACA    ++ G +I  S+    
Sbjct: 332 IAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEY 391

Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVE 399
           G+   +     L+ +  + G+++ + E
Sbjct: 392 GIKPKIEHYGCLVSLLGRAGQLKRAYE 418



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 140/348 (40%), Gaps = 69/348 (19%)

Query: 23  AWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQV 82
           A + GL  QA L   Q  +S   P        N  ++++ L+SC      ++   IH  V
Sbjct: 105 ASINGLKDQAFLLYVQLLSSEINP--------NEFTFSSLLKSC----STKSGKLIHTHV 152

Query: 83  LKKGNCLDLFATNVLLNVYVK----------LNRLPD---------------------AT 111
           LK G  +D +    L++VY K           +R+P+                     A 
Sbjct: 153 LKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAAR 212

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGH-ELNPFAFTAFLKVLVSM 170
            LFD M ER+ +S+   I GY       +A+ LF  L  EG  + +     A L     +
Sbjct: 213 ALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQI 272

Query: 171 GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL------------ 218
           G  E    +   V       N  V T LID +S CG +E A  VF+              
Sbjct: 273 GALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMI 332

Query: 219 ----FNDCFEEALNFFSQMRAV-GFKPNNFTFAFVLKAC--LGL--DTIRVAKSAHGCAL 269
                +   ++AL  F++M+ + G +P + TF   L+AC   GL  + IR+ +S  G   
Sbjct: 333 AGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESM-GQEY 391

Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
               +++ Y    L+ L  ++G++  A    + M    D + WS ++ 
Sbjct: 392 GIKPKIEHY--GCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLG 437


>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 216/595 (36%), Positives = 342/595 (57%), Gaps = 33/595 (5%)

Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
           T+  VL+ C  L +I+  +  H        E+D  +   L+ +Y   G++   RRIF+++
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP--------------NQFTFVSV 349
             + V  W+ ++  YA+     +++ LF RMR+  +                +  ++ S+
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSM 222

Query: 350 LQACAT----MEGLDLGNQIHSLVVRVGLLSDVFV----SNALMDVYAKCGRMENSVELF 401
           +    +     +GLDL  Q+  L +   L + V V    +N L+D+Y+K G + +++++F
Sbjct: 223 ISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVF 282

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
               +R+ V+W +MI GY + G    ++ +F +M +E +    +T + +L ACASLAALE
Sbjct: 283 ETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALE 342

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
            G ++H   ++  + +D  VANAL+DMY KCG++  ARL+FDM+ + + VSW  MI+GY 
Sbjct: 343 RGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYG 402

Query: 522 MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
           MHG  +E +  F+ M+  G  P+ ++F+ +L ACS+ GLL++G  +F  M  N  IEP  
Sbjct: 403 MHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKS 462

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
           EHY  +V LL RAG+L KA K I+ +P +P   IW ALL  C I+++V++    A+H+ +
Sbjct: 463 EHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFE 522

Query: 642 FEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDT 690
            EPE+   +VLL+NIYA A  WE           +   K PG SWIE +G VH F  GD+
Sbjct: 523 LEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDS 582

Query: 691 SHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKM 750
           SH   N I  +L+    + ++ G+ P +   L    + EKE  L  HSEK+A+AF +  +
Sbjct: 583 SHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGILSL 642

Query: 751 PPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           PP   +R+ KNLR+C DCH   K +SK+V+R+II+RD +RFHHF+DG CSC   W
Sbjct: 643 PPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGHW 697



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 81/343 (23%), Positives = 150/343 (43%), Gaps = 38/343 (11%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +Y + LQ C     +Q    IH  +      +D    + L+ +YV    L +  ++FD++
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREG--------------HELNPFAFTAF 163
                  +   + GY     F E++ LF  +   G               + +  ++ + 
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSM 222

Query: 164 LKVLVSMGWAELCPCVFACVYKLGHDSN--------AFVGTALIDAFSVCGCVEFARKVF 215
           +   VS G +E    +F  +  LG +++          +   L+D +S  G +  A +VF
Sbjct: 223 ISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVF 282

Query: 216 DGLFNDCF----------------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIR 259
           + +                     + ++  F +M      PN+ T A +L AC  L  + 
Sbjct: 283 ETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALE 342

Query: 260 VAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYA 319
             +  HG  L+  + +D +VA AL+D+Y K G +  AR +F+ +P+KD++ W+ MIA Y 
Sbjct: 343 RGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYG 402

Query: 320 QTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG 362
                 +A+  F  MR + + P++ +F+S+L AC+    LD G
Sbjct: 403 MHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEG 445



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 33/198 (16%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           NS + A  L +C     L+    IH  +L+ G  LD    N L+++Y+K   L  A  LF
Sbjct: 324 NSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLF 383

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV-----LVS 169
           D +PE++ +S+   I GY +     EA+  F+ +   G E +  +F + L       L+ 
Sbjct: 384 DMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLD 443

Query: 170 MGW---------------AELCPCVFACVYKLGHDSNAFV--------GTALIDAFSVCG 206
            GW               +E   C+   + + G+ S A+           A I    +CG
Sbjct: 444 EGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCG 503

Query: 207 C-----VEFARKVFDGLF 219
           C     V+ A KV + +F
Sbjct: 504 CRIYHDVKLAEKVAEHVF 521


>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
 gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
          Length = 675

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 211/537 (39%), Positives = 318/537 (59%), Gaps = 15/537 (2%)

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           A++  Y ++G +    R+FEEMP +DVI W+ MI        S +A+ +F +M ++ V P
Sbjct: 141 AMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEP 200

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
              TF  VL ACA     +LG Q+H  VV++G     F+S +L+  YA C ++E++ ++F
Sbjct: 201 TWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIF 260

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
            E+  +N V W  ++  YV   +   A+ +F  M +      + T+S  L+AC  L AL+
Sbjct: 261 NETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALD 320

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
            G ++H + +K   + DV V N+L+ MY +CG++  A  VF  +N+ + VSWN++I G +
Sbjct: 321 KGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSA 380

Query: 522 MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFK--SMVANYGIEP 579
            HG     L  F+ M +RG  PN +TF G+LSACS  G+L +G  +F+  S   +  + P
Sbjct: 381 QHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVLRP 440

Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHI 639
             +HY  MV +LGR G LD+A +L+  +P + + MIW ALL AC +H+N+E+   +A+HI
Sbjct: 441 --QHYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSACRVHSNLEVAERAAKHI 498

Query: 640 LDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAG 688
           LD EP   + +VLLSNIYA A  W   +            K+PG SW+  +G  H F + 
Sbjct: 499 LDLEPNCSSAYVLLSNIYASAGRWADVSRMRVKMKQGGLVKQPGSSWVVLRGKKHEFLSA 558

Query: 689 DTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALF 748
           D SH     I   L+WL  K ++ GY+PD    L DV +++KE  L  HSE+LA+AF L 
Sbjct: 559 DRSHPLSERIYEKLDWLGKKLKEFGYVPDQKFALHDVEDEQKEEMLSFHSERLAIAFGLV 618

Query: 749 KMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
                S I ++KNLR+C DCH+ IK++SKIV R+I++RD  RFHHF++G CSC D+W
Sbjct: 619 STVEGSTITVMKNLRVCGDCHSVIKLMSKIVGRKIVVRDSGRFHHFKNGICSCSDYW 675



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 137/487 (28%), Positives = 235/487 (48%), Gaps = 36/487 (7%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           SY TSL + ++N  L  A  I  ++       +L     ++  Y + +RL DA KLFD M
Sbjct: 14  SYTTSLANHLKNQRLDQARLIFDKIPSP----NLHLYTKMIAGYTRNDRLCDALKLFDRM 69

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
             R+ +S+ + I+G          +G+ + L  E  E N  ++T  +   +  G  EL  
Sbjct: 70  SVRDVVSWNSMIKGCLDCGN----LGMATRLFDEMPEKNVISWTTMVNGYLKFGRVELAQ 125

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FND 221
            +F  +    H  +     A++  +   G VE   ++F+ +                 N 
Sbjct: 126 RLFLDM----HVKDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNG 181

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
             EEAL  F +M   G +P   TFA VL AC       +    HG  +K       +++V
Sbjct: 182 KSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISV 241

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           +L+  Y    +I +A +IF E   K+V+ W+ ++  Y   +   DA+ +F  M +    P
Sbjct: 242 SLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALP 301

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           NQ TF   L+AC  +E LD G +IH++ +++GL +DVFV N+L+ +Y +CG + ++V +F
Sbjct: 302 NQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVF 361

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
               +++ V+WN++IVG  Q G    A+I F++M+   V   E+T++ +L AC+    L 
Sbjct: 362 RNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLL 421

Query: 462 PGMQVHC-LTVKANYDMDVVVAN---ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAM 516
            G    C     + Y  +V+       ++D+  +CG + +A  LV  M    N + W A+
Sbjct: 422 KG---RCFFEYISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLAL 478

Query: 517 ISGYSMH 523
           +S   +H
Sbjct: 479 LSACRVH 485



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 166/361 (45%), Gaps = 33/361 (9%)

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           + K+  +  AR IF+++P  ++  ++ MIA Y + D   DA++LF RM    V     ++
Sbjct: 22  HLKNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSVRDVV----SW 77

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLS---------------------------DVF 379
            S+++ C     L +  ++   +    ++S                           DV 
Sbjct: 78  NSMIKGCLDCGNLGMATRLFDEMPEKNVISWTTMVNGYLKFGRVELAQRLFLDMHVKDVA 137

Query: 380 VSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ 439
             NA++  Y + GR+E  V LF E P R+ ++W +MI G    G+  +A+ +F KML   
Sbjct: 138 AWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSG 197

Query: 440 VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR 499
           V  T  T++ VL ACA+      G+QVH   VK        ++ +LI  YA C  I  A 
Sbjct: 198 VEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAH 257

Query: 500 LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGG 559
            +F+     N V W A+++ Y  +    + L+VF  M + G  PN  TF   L AC    
Sbjct: 258 KIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLE 317

Query: 560 LLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRAL 619
            L++G+    +M    G+E  +    S+V +    G+++ A  +   I  +  ++ W ++
Sbjct: 318 ALDKGKE-IHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNIN-EKDIVSWNSI 375

Query: 620 L 620
           +
Sbjct: 376 I 376



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 54/259 (20%), Positives = 106/259 (40%), Gaps = 26/259 (10%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +++ +L++C   + L     IH   +K G   D+F  N L+ +Y +   +  A  +F
Sbjct: 302 NQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVF 361

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             + E++ +S+ + I G       + A+  F+ + R G + N   FT  L      G   
Sbjct: 362 RNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLL 421

Query: 175 LCPCVFACVYKLGHDSNAFVG---TALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFS 231
              C F  + +  + SN         ++D    CG ++ A ++                 
Sbjct: 422 KGRCFFEYISR--YKSNVLRPQHYACMVDILGRCGKLDEAEEL----------------- 462

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL-DLYTKS 290
            +R +  K N+  +  +L AC     + VA+ A    L    E +   A  LL ++Y  +
Sbjct: 463 -VRYMPVKANSMIWLALLSACRVHSNLEVAERAAKHILD--LEPNCSSAYVLLSNIYASA 519

Query: 291 GEISNARRIFEEMPKKDVI 309
           G  ++  R+  +M +  ++
Sbjct: 520 GRWADVSRMRVKMKQGGLV 538


>gi|326497609|dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 676

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 213/592 (35%), Positives = 333/592 (56%), Gaps = 13/592 (2%)

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           EAL  F  +     +P++ TF   L AC  L  +   +     A    Y  D++V  ++L
Sbjct: 87  EALRVFRALPPAA-RPDSTTFTLALSACARLGDLATGEVVTDRASGAGYGNDIFVCSSVL 145

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
           +LY K G + +A ++F+ M K+D + WS M+  +      + A+E++ RMR+  +  ++ 
Sbjct: 146 NLYAKCGAMDDAVKVFDRMRKRDRVTWSTMVTGFVNAGQPVQAIEMYMRMRRDGLEADEV 205

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
             V V+QACA      +G  +H  ++R  +  DV +S +L+D+YAK G  + +  +F   
Sbjct: 206 VIVGVMQACAATGDARMGASVHGYLLRHAMQMDVVISTSLVDMYAKNGLFDQARRVFELM 265

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
           P RN V+W+ +I    Q G   +A+ +F  M    +          L AC+ L  L+ G 
Sbjct: 266 PHRNDVSWSALISQLAQYGNADEALGLFRMMQVSGLHPNSGPVVGALLACSDLGLLKLGK 325

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
            +H   ++   ++D +V  A+IDMY+KCGS++ A+++FD +   + +SWN MI+    HG
Sbjct: 326 SIHGFILR-TLELDRMVGTAVIDMYSKCGSLSSAQMLFDKVVSRDLISWNVMIACCGAHG 384

Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY 584
              + L +F  M++   RP++ TF  +LSA S+ GL+E+G+ +F  MV  YGIEP  +H 
Sbjct: 385 RGRDALSLFQEMKRNEVRPDHATFASLLSALSHSGLVEEGKFWFNCMVNEYGIEPGEKHL 444

Query: 585 TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEP 644
             +V LL R+G +++A  L+  +  +P++ I  ALL  C+ +N +E+G  +A+ IL+ +P
Sbjct: 445 VCIVDLLARSGLVEEANGLVASLHSKPTISILVALLSGCLNNNKLELGESTAEKILELQP 504

Query: 645 EDEATHVLLSNIYAMARSWEK-----------AASKEPGLSWIENQGMVHYFRAGDTSHA 693
            D     L+SN+YA A++W K            + K PG S IE +G +H F   D SH 
Sbjct: 505 GDVGVLALVSNLYAAAKNWYKVREVRKLMKDHGSKKAPGCSSIEIRGALHTFVMEDQSHP 564

Query: 694 DMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPS 753
               I  M+  L+ + RK GYIP    V  D+ E  KE+ L  HSE+LA AF L    P 
Sbjct: 565 QHRQILQMVMKLDSEMRKMGYIPKTEFVYHDLEEGVKEQLLSRHSERLATAFGLLNTSPG 624

Query: 754 SPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           + + +IKNLR+C DCH AIK +SKI  REI++RD  RFHHF+DG CSCGD+W
Sbjct: 625 TRLVVIKNLRVCGDCHDAIKYMSKIADREIVVRDAKRFHHFKDGACSCGDYW 676



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/344 (30%), Positives = 186/344 (54%), Gaps = 6/344 (1%)

Query: 287 YTKSGEISNARRIFEEMP-KKDVIP-WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
           Y ++G+++ A       P     IP W+ ++A +++     +A+ +F R       P+  
Sbjct: 46  YARAGDLAAAESTLATAPTSPSSIPAWNALLAAHSRGASPHEALRVF-RALPPAARPDST 104

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           TF   L ACA +  L  G  +       G  +D+FV ++++++YAKCG M+++V++F   
Sbjct: 105 TFTLALSACARLGDLATGEVVTDRASGAGYGNDIFVCSSVLNLYAKCGAMDDAVKVFDRM 164

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
            KR+ VTW+TM+ G+V  G+  +A+ M+ +M  + + A EV    V++ACA+      G 
Sbjct: 165 RKRDRVTWSTMVTGFVNAGQPVQAIEMYMRMRRDGLEADEVVIVGVMQACAATGDARMGA 224

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
            VH   ++    MDVV++ +L+DMYAK G    AR VF++M   N+VSW+A+IS  + +G
Sbjct: 225 SVHGYLLRHAMQMDVVISTSLVDMYAKNGLFDQARRVFELMPHRNDVSWSALISQLAQYG 284

Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY 584
            + E L +F +MQ  G  PN+   VG L ACS+ GLL+ G++    ++    ++  +   
Sbjct: 285 NADEALGLFRMMQVSGLHPNSGPVVGALLACSDLGLLKLGKSIHGFILRTLELDRMVG-- 342

Query: 585 TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
           T+++ +  + G L  A  L + +     ++ W  ++  C  H  
Sbjct: 343 TAVIDMYSKCGSLSSAQMLFDKV-VSRDLISWNVMIACCGAHGR 385



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 172/360 (47%), Gaps = 32/360 (8%)

Query: 16  THQSKINAW-------LRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQ 68
           T  S I AW        RG S   AL   +       P        +S ++  +L +C +
Sbjct: 64  TSPSSIPAWNALLAAHSRGASPHEALRVFRALPPAARP--------DSTTFTLALSACAR 115

Query: 69  NDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTT 128
             DL T   +  +    G   D+F  + +LN+Y K   + DA K+FD M +R+ +++ T 
Sbjct: 116 LGDLATGEVVTDRASGAGYGNDIFVCSSVLNLYAKCGAMDDAVKVFDRMRKRDRVTWSTM 175

Query: 129 IQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGH 188
           + G+  + Q V+A+ ++  + R+G E +       ++   + G A +   V   + +   
Sbjct: 176 VTGFVNAGQPVQAIEMYMRMRRDGLEADEVVIVGVMQACAATGDARMGASVHGYLLRHAM 235

Query: 189 DSNAFVGTALIDAFSVCGCVEFARKVFDGL--FNDC--------------FEEALNFFSQ 232
             +  + T+L+D ++  G  + AR+VF+ +   ND                +EAL  F  
Sbjct: 236 QMDVVISTSLVDMYAKNGLFDQARRVFELMPHRNDVSWSALISQLAQYGNADEALGLFRM 295

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           M+  G  PN+      L AC  L  +++ KS HG  L+T  E+D  V  A++D+Y+K G 
Sbjct: 296 MQVSGLHPNSGPVVGALLACSDLGLLKLGKSIHGFILRT-LELDRMVGTAVIDMYSKCGS 354

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           +S+A+ +F+++  +D+I W+ MIA         DA+ LF  M++  V P+  TF S+L A
Sbjct: 355 LSSAQMLFDKVVSRDLISWNVMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFASLLSA 414


>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 246/660 (37%), Positives = 372/660 (56%), Gaps = 41/660 (6%)

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCF---------EEA 226
           V+   HD N F    LI A++    VE A ++FD +       +N            + A
Sbjct: 65  VFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPA 124

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV--ALL 284
              F +MR      + FT + ++ AC G++ + + +  H  AL     +D YV+V  AL+
Sbjct: 125 FQLFLEMREAFLDMDGFTLSGIITAC-GIN-VGLIRQLH--ALSVVTGLDSYVSVGNALI 180

Query: 285 DLYTKSGEISNARRIFEEMPK-KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
             Y+K+G +  ARRIF  + + +D + W+ M+  Y Q      A+EL+  M    +  + 
Sbjct: 181 TSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDI 240

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR-MENSVELFA 402
           FT  SVL A   ++ L  G Q H+ +++ G   +  V + L+D+Y+KCG  M +  ++F 
Sbjct: 241 FTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFD 300

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVG-KAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
           E    + V WNTMI GY    ++  +A+  F ++        + +   V+ AC+++++  
Sbjct: 301 EISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPS 360

Query: 462 PGMQVHCLTVKANYDMD-VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY 520
            G QVH L +K +   + + V NALI MY+KCG++ DA+ +FD M + N VS+N+MI+GY
Sbjct: 361 QGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGY 420

Query: 521 SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPC 580
           + HG+  + L +F  M +  + P N+TF+ VL+AC++ G +E G+ YF  M   +GIEP 
Sbjct: 421 AQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPE 480

Query: 581 IEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHIL 640
             H++ M+ LLGRAG L +A +LIE IPF P    W ALLGAC IH NVE+   +A  +L
Sbjct: 481 AGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLL 540

Query: 641 DFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGD 689
             +P + A +V+L+NIY+     + AAS           K+PG SWIE    +H F A D
Sbjct: 541 QLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAED 600

Query: 690 TSHADMNIIRGMLEWLNMKSRKAGYIPDL--SAVLRDVR--EDEKERYLWVHSEKLALAF 745
           T H  +  I+  LE +  K +K GY P++  ++V  D R  + E+E  L  HSEKLA++F
Sbjct: 601 TFHPMIKKIQEYLEEMMRKIKKVGYTPEVRSASVGGDDRVWQREEELRLGHHSEKLAVSF 660

Query: 746 ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            L       PI + KNLRICVDCH AIK IS++V+REI +RD HRFH F+DG CSCG +W
Sbjct: 661 GLMSTREGEPILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSCGGYW 720



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 153/578 (26%), Positives = 279/578 (48%), Gaps = 63/578 (10%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKK----------------GNCLDL--------- 91
           HS+   L++CI + DL+T  ++H   +K                   C  L         
Sbjct: 9   HSFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDH 68

Query: 92  ------FATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLF 145
                 F+ N L++ Y K + +  A +LFDEMP+ +++S+ T I  Y        A  LF
Sbjct: 69  THDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLF 128

Query: 146 STLHREGHELNPFAFTAFLKVL-VSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSV 204
             +     +++ F  +  +    +++G   L   + A     G DS   VG ALI ++S 
Sbjct: 129 LEMREAFLDMDGFTLSGIITACGINVG---LIRQLHALSVVTGLDSYVSVGNALITSYSK 185

Query: 205 CGCVEFARKVFDGLFNDCFE-----------------EALNFFSQMRAVGFKPNNFTFAF 247
            G ++ AR++F  L  D  E                 +AL  + +M   G   + FT A 
Sbjct: 186 NGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLAS 245

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE-ISNARRIFEEMPKK 306
           VL A   +  +      H   +K+ Y  + +V   L+DLY+K G  + + R++F+E+   
Sbjct: 246 VLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNP 305

Query: 307 DVIPWSFMIARYA-QTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
           D++ W+ MI+ Y+   DLS +A+E F +++     P+  + V V+ AC+ M     G Q+
Sbjct: 306 DLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQV 365

Query: 366 HSLVVRVGLLSD-VFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
           H L +++ + S+ + V+NAL+ +Y+KCG + ++  LF   P+ N V++N+MI GY Q G 
Sbjct: 366 HGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGM 425

Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN- 483
             +++ +F +MLE     T +T+ SVL ACA    +E G +++   +K  + ++    + 
Sbjct: 426 GFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDG-KIYFNMMKQKFGIEPEAGHF 484

Query: 484 -ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW 541
             +ID+  + G +++A RL+  +  D     W+A++    +HG     +K  + + Q   
Sbjct: 485 SCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQ--L 542

Query: 542 RP-NNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
            P N   +V + +  S+ G L Q  A  + ++ + G++
Sbjct: 543 DPLNAAPYVMLANIYSDNGRL-QDAASVRKLMRDRGVK 579


>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
          Length = 550

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 207/481 (43%), Positives = 296/481 (61%), Gaps = 15/481 (3%)

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           + P    + S+LQ+C   + +  G Q+H+ V   G   D  ++  L+++Y  C  + ++ 
Sbjct: 71  LTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSAR 130

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            LF   PK N   WN +I GY   G    A+ ++ +M +  +     T+  VL+ACA+L+
Sbjct: 131 LLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALS 190

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEV---SWNA 515
           A+E G ++H   V+  ++ DV V  ALIDMYAKCG +  AR VFD +   + V   SWNA
Sbjct: 191 AIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNA 250

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           MI+GY+MHG + E L +F+ M  R  +P+++TFVGVLSACS+GGLLE+G  +F++M+ +Y
Sbjct: 251 MITGYAMHGHATEALDLFEEMN-RVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDY 309

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS 635
            I+P ++HYT MV LLG +G LD+A  LI  +   P   +W ALL +C IH NVE+G ++
Sbjct: 310 KIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIA 369

Query: 636 AQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHY 684
            + +++ EP+D   +V+LSNIYA A  WE  A            K    SWIE +  VH 
Sbjct: 370 LERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHA 429

Query: 685 FRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALA 744
           F +GDTSH   + I   LE +    ++AGY P   +V  DV +DEK   +  HSE+LA+A
Sbjct: 430 FLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAIA 489

Query: 745 FALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
           F L   PP + + I KNLRIC DCH AIK ISKI +REI +RDV+R+HHF+DG CSCGD+
Sbjct: 490 FGLISTPPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKDGVCSCGDY 549

Query: 805 W 805
           W
Sbjct: 550 W 550



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 149/291 (51%), Gaps = 8/291 (2%)

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           P    +A +L++C+    I+  K  H       +  D  +A  L++LY     +S+AR +
Sbjct: 73  PTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLL 132

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL 359
           F+ +PK ++  W+ +I  YA       AV+L+ +M    + P+ FTF  VL+ACA +  +
Sbjct: 133 FDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAI 192

Query: 360 DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNH---VTWNTMI 416
           + G +IH  VV+ G   DVFV  AL+D+YAKCG + ++ E+F +   R+    V+WN MI
Sbjct: 193 EHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAMI 252

Query: 417 VGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD 476
            GY   G   +A+ +F +M     P   +T+  VL AC+    LE G       ++ +Y 
Sbjct: 253 TGYAMHGHATEALDLFEEMNRVAKP-DHITFVGVLSACSHGGLLEEGWMFFETMIR-DYK 310

Query: 477 MDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHG 524
           +D  V +   ++D+    G + +A  L+  M    +   W A+++   +H 
Sbjct: 311 IDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHA 361



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 116/459 (25%), Positives = 200/459 (43%), Gaps = 72/459 (15%)

Query: 124 SFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPF--AFTAFLKVLVSMGWAELCPCVFA 181
           SF ++   +  +   ++A+   S  H E   L P    + + L+  ++    +    + A
Sbjct: 40  SFTSSAPQFDNNQTHLKAIPSCSNPHAESTCLTPTYSNYASLLQSCIARKAIKPGKQLHA 99

Query: 182 CVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEE 225
            V   G   +  + T L++ + VC  +  AR +FD +                +N  +E 
Sbjct: 100 QVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEA 159

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           A+  + QM   G  P+NFTF FVLKAC  L  I   +  H   ++T +E D++V  AL+D
Sbjct: 160 AVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALID 219

Query: 286 LYTKSGEISNARRIFEEMPKKD---VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           +Y K G + +AR +F+++  +D   V+ W+ MI  YA    + +A++LF  M +    P+
Sbjct: 220 MYAKCGCVGSAREVFDKILVRDAVLVVSWNAMITGYAMHGHATEALDLFEEMNRV-AKPD 278

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
             TFV VL AC+                  GLL + ++              E  +  + 
Sbjct: 279 HITFVGVLSACS----------------HGGLLEEGWMF------------FETMIRDYK 310

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
             P   H T    ++G+    +    +IM  K+L    P + V + ++L +C   A +E 
Sbjct: 311 IDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVL----PDSGV-WGALLNSCKIHANVEL 365

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGS----------ITDARLVFDMMNDWNEV- 511
           G       ++   D D      L ++YA+ G           +TD RL   +   W EV 
Sbjct: 366 GEIALERLIELEPD-DAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVK 424

Query: 512 -SWNAMISGYSMHGLSAEVL----KVFDLMQQRGWRPNN 545
              +A +SG + H LS E+     +V  LM++ G+ P+ 
Sbjct: 425 NKVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPST 463



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 130/307 (42%), Gaps = 51/307 (16%)

Query: 28  LSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGN 87
           L A  + S     ++  TP T+S       +YA+ LQSCI    ++    +H QV   G 
Sbjct: 55  LKAIPSCSNPHAESTCLTP-TYS-------NYASLLQSCIARKAIKPGKQLHAQVCLAGF 106

Query: 88  CLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFST 147
             D      L+N+Y   + L  A  LFD +P+ N   +   I+GY  +  +  AV L+  
Sbjct: 107 GFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQ 166

Query: 148 LHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGC 207
           +   G   + F F   LK   ++   E    +   V + G + + FVG ALID ++ CGC
Sbjct: 167 MFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGC 226

Query: 208 VEFARKVFDG-LFNDCF------------------EEALNFFSQMRAVGFKPNNFTFAFV 248
           V  AR+VFD  L  D                     EAL+ F +M  V  KP++ TF  V
Sbjct: 227 VGSAREVFDKILVRDAVLVVSWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGV 285

Query: 249 LKACLGLDTIRVAKSAHGCALKTC----------YEMDLYVA--VALLDLYTKSGEISNA 296
           L AC           +HG  L+            Y++D  V     ++DL   SG +  A
Sbjct: 286 LSAC-----------SHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEA 334

Query: 297 RRIFEEM 303
             +  +M
Sbjct: 335 YNLIMQM 341


>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
 gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
          Length = 601

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 216/580 (37%), Positives = 342/580 (58%), Gaps = 16/580 (2%)

Query: 242 NFTFAFVLKACL-GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK---SGEISNAR 297
           N T+   L +CL    +++  K     ++KT  + DL +   L++  T+   +  +  A 
Sbjct: 22  NTTYPSSLLSCLPKCTSLKELKQIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAH 81

Query: 298 RIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATME 357
           ++FE +P+ D++ ++ M   Y++++  + A+ LF +     + P+ +TF S+L+AC   +
Sbjct: 82  QLFEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAK 141

Query: 358 GLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIV 417
               G Q+H L +++GL  + +V   L+++YA C  ++ +  +F E  +   V++N +I 
Sbjct: 142 AFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIIT 201

Query: 418 GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM 477
           GY +     +A+ +F ++   ++   +VT  SVL +CA L AL+ G  +H    K   D 
Sbjct: 202 GYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDK 261

Query: 478 DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQ 537
            V V  ALIDMYAKCGS+  A  VF+ M+  +  +W+AMI  Y+MHG   +V+ +F+ M 
Sbjct: 262 YVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMA 321

Query: 538 QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHL 597
           +   +P+ +TF+G+L ACS+ GL+++G  YF SM   YGI P I+HY  MV LLGRAG L
Sbjct: 322 RAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLL 381

Query: 598 DKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIY 657
            +A K I+ +P +P+ ++WR LL +C  H N+E+ +     IL+ +      +V+LSN+ 
Sbjct: 382 HEAYKFIDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILELDDSHGGDYVILSNLC 441

Query: 658 AMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLN 706
           A A  WE           K A K PG S IE   +VH F +GD  H     +   L+ L 
Sbjct: 442 ARAGKWEDVDTLRKLMIHKGAVKIPGCSSIEVDNVVHEFFSGDGVHYVSTALHRALDELV 501

Query: 707 MKSRKAGYIPDLSAVLR-DVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRIC 765
            + +  GY+PD S V+  D+ ++EKE  L  HSEKLA++F L   PP + IR++KNLR+C
Sbjct: 502 KELKSVGYVPDTSLVVHPDMEDEEKEITLRYHSEKLAISFGLLNTPPGTTIRVVKNLRVC 561

Query: 766 VDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            DCH+A K+IS ++ REII+RDV RFHHF+DG CSCGD+W
Sbjct: 562 GDCHSAAKLISSLIDREIILRDVQRFHHFKDGKCSCGDYW 601



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 101/394 (25%), Positives = 190/394 (48%), Gaps = 41/394 (10%)

Query: 208 VEFARKVFDG-------LFNDCFE---------EALNFFSQMRAVGFKPNNFTFAFVLKA 251
           +++A ++F+        LFN  F          +A++ F +       P+++TF  +LKA
Sbjct: 77  MDYAHQLFEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKA 136

Query: 252 CLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPW 311
           C+     +  K  H  A+K     + YV   L+++Y    ++  A+R+F+E+ +  V+ +
Sbjct: 137 CVVAKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSY 196

Query: 312 SFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR 371
           + +I  YA++    +A+ LF +++   + PN  T +SVL +CA +  LDLG  IH  V +
Sbjct: 197 NAIITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKK 256

Query: 372 VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIM 431
            GL   V V+ AL+D+YAKCG ++ ++ +F     R+   W+ MIV Y   G+    M M
Sbjct: 257 NGLDKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSM 316

Query: 432 FSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA--------N 483
           F +M   +V   E+T+  +L AC+    ++ G +         Y M  V           
Sbjct: 317 FEEMARAKVQPDEITFLGLLYACSHTGLVDEGFRYF-------YSMSEVYGIIPGIKHYG 369

Query: 484 ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHG---LSAEVL-KVFDLMQQ 538
            ++D+  + G + +A + + ++      + W  ++S  S HG   L+ +V+ ++ +L   
Sbjct: 370 CMVDLLGRAGLLHEAYKFIDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILELDDS 429

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
            G       +V + + C+  G  E  +   K M+
Sbjct: 430 HGG-----DYVILSNLCARAGKWEDVDTLRKLMI 458



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/408 (25%), Positives = 183/408 (44%), Gaps = 22/408 (5%)

Query: 52  SEFNSHSYATSLQSCIQN-DDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVK---LNRL 107
           S + + +Y +SL SC+     L+    I    +K     DL     L+N   +      +
Sbjct: 18  SSYYNTTYPSSLLSCLPKCTSLKELKQIQAFSIKTHLQNDLQILTKLINSCTQNPTTASM 77

Query: 108 PDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVL 167
             A +LF+ +P+ + + F +  +GY+ S+  ++A+ LF          + + F + LK  
Sbjct: 78  DYAHQLFEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKAC 137

Query: 168 VSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF---- 223
           V     +    +     KLG + N +V   LI+ ++ C  V+ A++VFD +   C     
Sbjct: 138 VVAKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYN 197

Query: 224 ------------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT 271
                        EAL+ F Q++A   KPN+ T   VL +C  L  + + K  H    K 
Sbjct: 198 AIITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKN 257

Query: 272 CYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELF 331
             +  + V  AL+D+Y K G +  A  +FE M  +D   WS MI  YA      D + +F
Sbjct: 258 GLDKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMF 317

Query: 332 CRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVYAK 390
             M +A V P++ TF+ +L AC+    +D G    +S+    G++  +     ++D+  +
Sbjct: 318 EEMARAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGR 377

Query: 391 CGRMENSVELFAESP-KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
            G +  + +   E P K   + W T++      G +  A  + +++LE
Sbjct: 378 AGLLHEAYKFIDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILE 425


>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Brachypodium distachyon]
          Length = 706

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 257/731 (35%), Positives = 382/731 (52%), Gaps = 57/731 (7%)

Query: 91  LFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHR 150
           + A N  +   V+   +  A   FD MP R T S+   I GY  +     A+GLF     
Sbjct: 17  VVAANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLF----- 71

Query: 151 EGHELNPFAFTAFLKVLVSMGWAE-LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
             H +      ++  ++  +       P   A +  +    +    T+L+  +       
Sbjct: 72  --HRMPSRDLGSYNALIAGLSLRRHTLPDAAAALASIPLPPSVVSFTSLLRGY------- 122

Query: 210 FARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCAL 269
               V  GL  D    A+  F QM     + N+ T+  +L   L  D  RV +     A 
Sbjct: 123 ----VRHGLLAD----AIRLFHQMP----ERNHVTYTVLLGGFL--DAGRVNE-----AR 163

Query: 270 KTCYEM---DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSID 326
           K   EM   D+    A+L  Y ++G I+ AR +F+EMPK++V+ W+ MI+ YAQ    I 
Sbjct: 164 KLFDEMPDKDVVARTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGKVIL 223

Query: 327 AVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMD 386
           A +LF  M            V  +QA    +  DL N +            V   NA+M 
Sbjct: 224 ARKLFEVMPDRNEVSWTAMLVGYIQAGHVEDAEDLFNAMPD--------HPVAACNAMMV 275

Query: 387 VYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVT 446
            + + G ++ +  +F     R+  TW+ MI  Y Q   + +A+  F +ML   +     +
Sbjct: 276 GFGQHGMVDAAKAMFERMCARDDGTWSAMIKVYEQNEFLMEALSTFREMLCRGIRPNYTS 335

Query: 447 YSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN 506
           + S+L  CA+LA  + G ++H   ++ ++D DV   +ALI MY KCG++  A+ VF+M  
Sbjct: 336 FISILTVCAALATADYGRELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVFNMFE 395

Query: 507 DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEA 566
             + V WN+MI+GY+ HGL  E L +FD ++     P+ +T++GVL+ACS  G +++G  
Sbjct: 396 PKDVVMWNSMITGYAQHGLGEEALGIFDDLRLARMAPDGITYIGVLTACSYTGKVKEGRE 455

Query: 567 YFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH 626
            F SM  N  I     HY+ MV LLGRAG +D+A  LI  +P +P  +IW AL+GAC +H
Sbjct: 456 IFNSMGMNSSIRLGAAHYSCMVDLLGRAGLVDEALDLINNMPVEPDAIIWGALMGACRMH 515

Query: 627 NNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSW 675
            N EI  ++A+ +L+ EP     +VLLS+IY     WE A+           +K PG SW
Sbjct: 516 KNAEIAEVAAKKLLELEPGSAGPYVLLSHIYTSTGRWEDASDMRKFISSRNLNKSPGCSW 575

Query: 676 IENQGMVHYFRAGDT-SHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYL 734
           IE   MVH F +GD  SH +  II  MLE L+    ++GY  D S VL DV E++K + L
Sbjct: 576 IEYNKMVHLFTSGDVLSHPEHAIILNMLEELDGLLMESGYSADGSFVLHDVDEEQKAQSL 635

Query: 735 WVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHF 794
             HSE+ A+A+ L K+P   PIR++KNLR+C DCH+AIK+I+KI  REII+RD +RFHHF
Sbjct: 636 RYHSERQAVAYGLLKVPAGMPIRVMKNLRVCGDCHSAIKLITKITSREIILRDANRFHHF 695

Query: 795 QDGCCSCGDFW 805
           +DG CSC D+W
Sbjct: 696 KDGLCSCRDYW 706



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 180/379 (47%), Gaps = 33/379 (8%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D+ A   +L+ Y +  R+ +A  LFDEMP+RN +S+   I GY  + + + A  LF  + 
Sbjct: 173 DVVARTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGKVILARKLFEVMP 232

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
               + N  ++TA L   +  G  E    +F  +     D       A++  F   G V+
Sbjct: 233 ----DRNEVSWTAMLVGYIQAGHVEDAEDLFNAM----PDHPVAACNAMMVGFGQHGMVD 284

Query: 210 FARKVF-------DGLF---------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL 253
            A+ +F       DG +         N+   EAL+ F +M   G +PN  +F  +L  C 
Sbjct: 285 AAKAMFERMCARDDGTWSAMIKVYEQNEFLMEALSTFREMLCRGIRPNYTSFISILTVCA 344

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSF 313
            L T    +  H   L+  ++ D++   AL+ +Y K G +  A+R+F     KDV+ W+ 
Sbjct: 345 ALATADYGRELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVFNMFEPKDVVMWNS 404

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
           MI  YAQ  L  +A+ +F  +R A +AP+  T++ VL AC+    +  G +I +    +G
Sbjct: 405 MITGYAQHGLGEEALGIFDDLRLARMAPDGITYIGVLTACSYTGKVKEGREIFN---SMG 461

Query: 374 LLSDVFVSNA----LMDVYAKCGRMENSVELFAESP-KRNHVTWNTMIVGYVQLGEVGKA 428
           + S + +  A    ++D+  + G ++ +++L    P + + + W  ++ G  ++ +  + 
Sbjct: 462 MNSSIRLGAAHYSCMVDLLGRAGLVDEALDLINNMPVEPDAIIWGALM-GACRMHKNAEI 520

Query: 429 MIMFSKMLEEQVPATEVTY 447
             + +K L E  P +   Y
Sbjct: 521 AEVAAKKLLELEPGSAGPY 539



 Score = 41.6 bits (96), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 52/249 (20%), Positives = 98/249 (39%), Gaps = 32/249 (12%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  S+ + L  C           +H  +L+     D+FA + L+ +Y+K   L  A ++F
Sbjct: 332 NYTSFISILTVCAALATADYGRELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVF 391

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           +    ++ + + + I GY       EA+G+F  L      + P   T ++ VL +  +  
Sbjct: 392 NMFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLRLA--RMAPDGIT-YIGVLTACSYTG 448

Query: 175 LCPCVFACVYKLGHDSNAFVGTA----LIDAFSVCGCVEFARKVFDGLFNDCFEEALNFF 230
                      +G +S+  +G A    ++D     G V               +EAL+  
Sbjct: 449 KVKEGREIFNSMGMNSSIRLGAAHYSCMVDLLGRAGLV---------------DEALDLI 493

Query: 231 SQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA---VALLDLY 287
           + M     +P+   +  ++ AC       +A+     A K   E++   A   V L  +Y
Sbjct: 494 NNM---PVEPDAIIWGALMGACRMHKNAEIAE----VAAKKLLELEPGSAGPYVLLSHIY 546

Query: 288 TKSGEISNA 296
           T +G   +A
Sbjct: 547 TSTGRWEDA 555


>gi|296089956|emb|CBI39775.3| unnamed protein product [Vitis vinifera]
          Length = 599

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 222/523 (42%), Positives = 305/523 (58%), Gaps = 48/523 (9%)

Query: 296 ARRIFE--EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
           A++IF+  E  K +   W+  +   A+ D  IDA+ LF R+RQ  V P+ FT  SVL+AC
Sbjct: 112 AQQIFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRAC 171

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
             +  L  G  +H +V +VG  S                                   W 
Sbjct: 172 LNLLDLSNGRILHGVVEKVGFRS-----------------------------------WT 196

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
           +MI GYVQ G+  +A+ +F+KM E  V   EVT  +VL ACA L AL+ GM++H  + + 
Sbjct: 197 SMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRH 256

Query: 474 NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVF 533
            +  +V ++N LIDMY KCG + +A  VF+ M +   VSW+AMI G +MHG + E L++F
Sbjct: 257 GFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLF 316

Query: 534 DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGR 593
             M Q G  PN +TF+G+L ACS+ GL+ +G  +F SM  +YGI P IEHY  MV LL R
Sbjct: 317 SDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSR 376

Query: 594 AGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLL 653
           AG L +A + I  +P +P+ ++W ALLGAC +H NVE+   + +H+L+ +P ++  +V+L
Sbjct: 377 AGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVL 436

Query: 654 SNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGML 702
           SNIYA A  WE  A            K PG S I   G+VH F AG+ SH D   I    
Sbjct: 437 SNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRW 496

Query: 703 EWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNL 762
           E L  + R  GY+P+ S VL D+ E EK +++  HSEKLAL F L   P  +PIRI+KNL
Sbjct: 497 EELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMKNL 556

Query: 763 RICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           RIC DCH+A K+IS IV REI++RD +RFH F D  CSC D+W
Sbjct: 557 RICEDCHSAFKLISAIVNREIVVRDRNRFHCFNDNSCSCRDYW 599



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 145/302 (48%), Gaps = 39/302 (12%)

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           +A+  F ++R     P+ FT + VL+ACL L                            L
Sbjct: 144 DAIMLFYRLRQYDVCPDTFTCSSVLRACLNL----------------------------L 175

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
           DL       SN R +   + K     W+ MIA Y Q   + +A+ LF +M +A V  N+ 
Sbjct: 176 DL-------SNGRILHGVVEKVGFRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEV 228

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           T V+VL ACA +  LDLG +IH    R G   +V +SN L+D+Y KCG +E + ++F E 
Sbjct: 229 TVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEM 288

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
            +R  V+W+ MI G    G   +A+ +FS M +  +    VT+  +L AC+ +  +  G 
Sbjct: 289 EERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGR 348

Query: 465 QVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYS 521
           +    ++  +Y +   + +   ++D+ ++ G + +A   + +M    N V W A++    
Sbjct: 349 RFFA-SMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACR 407

Query: 522 MH 523
           +H
Sbjct: 408 VH 409



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 100/195 (51%), Gaps = 2/195 (1%)

Query: 224 EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
           +EA++ F++M   G K N  T   VL AC  L  + +    H  + +  ++ ++ ++  L
Sbjct: 209 KEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTL 268

Query: 284 LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
           +D+Y K G +  A ++FEEM ++ V+ WS MI   A    + +A+ LF  M Q  + PN 
Sbjct: 269 IDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNG 328

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVR-VGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
            TF+ +L AC+ M  +  G +  + + R  G++  +     ++D+ ++ G +  + E   
Sbjct: 329 VTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFIL 388

Query: 403 ESP-KRNHVTWNTMI 416
             P K N V W  ++
Sbjct: 389 NMPMKPNGVVWGALL 403



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 80/363 (22%), Positives = 143/363 (39%), Gaps = 60/363 (16%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           + + L++  + D    A+ +  ++ +   C D F  + +L   + L  L +   L   + 
Sbjct: 129 WNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVE 188

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
           +    S+ + I GY    +  EA+ LF+ +   G + N     A L     +G  +L   
Sbjct: 189 KVGFRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMR 248

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDC 222
           +     + G   N  +   LID +  CGC+E A KVF+ +                 +  
Sbjct: 249 IHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGR 308

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
            EEAL  FS M  VG +PN  TF  +L AC                              
Sbjct: 309 AEEALRLFSDMSQVGIEPNGVTFIGLLHAC------------------------------ 338

Query: 283 LLDLYTKSGEISNARRIFEEMPKK-DVIP----WSFMIARYAQTDLSIDAVELFCRMRQA 337
                +  G IS  RR F  M +   +IP    +  M+   ++  L  +A E    M   
Sbjct: 339 -----SHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMP-- 391

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            + PN   + ++L AC   + +++  +    ++ +  L+D +    L ++YA+ GR E++
Sbjct: 392 -MKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYV-VLSNIYAEAGRWEDT 449

Query: 398 VEL 400
             +
Sbjct: 450 ARV 452



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 26/258 (10%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +    L +C     L   M IH    + G   ++  +N L+++YVK   L +A K+F
Sbjct: 226 NEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVF 285

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           +EM ER  +S+   I G  +  +  EA+ LFS + + G E N   F   L     MG   
Sbjct: 286 EEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLIS 345

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGC-VEFARKVFDGLFNDCFEEALNFFSQM 233
                FA + +            +I      GC V+   +   GL ++  E  LN     
Sbjct: 346 EGRRFFASMTR---------DYGIIPQIEHYGCMVDLLSRA--GLLHEAHEFILN----- 389

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY---VAVALLDLYTKS 290
             +  KPN   +  +L AC     + +A+     A+K   E+D       V L ++Y ++
Sbjct: 390 --MPMKPNGVVWGALLGACRVHKNVEMAEE----AIKHLLELDPLNDGYYVVLSNIYAEA 443

Query: 291 GEISNARRIFEEMPKKDV 308
           G   +  R+ + M  + V
Sbjct: 444 GRWEDTARVRKFMKDRQV 461


>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 218/556 (39%), Positives = 330/556 (59%), Gaps = 15/556 (2%)

Query: 265 HGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLS 324
           H   ++  +  D ++   LL   +K   I  A RIF+     +V  ++ +I  +  +   
Sbjct: 52  HAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNY 111

Query: 325 IDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNAL 384
            DA++L+ RM    + P+ +   S+L+AC +   L  G ++HS  +++GL S+  V   +
Sbjct: 112 FDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRI 171

Query: 385 MDVYAKCGRMENSVELFAESPK----RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQV 440
           M++Y KCG + ++  +F E P+    ++ V W  MI G+V+  E+ +A+  F  M  E V
Sbjct: 172 MELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENV 231

Query: 441 PATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARL 500
              E T   VL AC+ L ALE G  VH    K   ++++ V NALI+MY++CGSI +A+ 
Sbjct: 232 RPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQT 291

Query: 501 VFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGL 560
           VFD M D + +++N MISG SM+G S + +++F +M  R  RP N+TFVGVL+ACS+GGL
Sbjct: 292 VFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGL 351

Query: 561 LEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
           ++ G   F SM  +YG+EP IEHY  MV LLGR G L++A  LI  +   P  ++   LL
Sbjct: 352 VDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLL 411

Query: 621 GACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SK 669
            AC +H N+E+G   A+ + D    D  T+VLLS++YA +  W++AA            K
Sbjct: 412 SACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQK 471

Query: 670 EPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDE 729
           EPG S IE    +H F  GD  H     I   LE LN   R  GY P+   VL+D+ + E
Sbjct: 472 EPGCSSIEVNNEIHEFLLGDLRHPRKERIYEKLEELNRLLRLEGYHPEKEVVLQDIEDGE 531

Query: 730 KERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVH 789
           KE  L +HSE+LA+ + L    P + IR++KNLR+C DCH+AIK+I+KI +R++++RD +
Sbjct: 532 KEWALAIHSERLAICYGLISTEPCTVIRVMKNLRVCYDCHSAIKLIAKITRRKVVVRDRN 591

Query: 790 RFHHFQDGCCSCGDFW 805
           RFH+F++G CSCGD+W
Sbjct: 592 RFHYFENGACSCGDYW 607



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 117/450 (26%), Positives = 199/450 (44%), Gaps = 46/450 (10%)

Query: 55  NSHSYATSLQSCIQ---------NDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLN 105
           NS+S   SL+S  Q         +  +   + IH Q+++ G+  D F    LL    K +
Sbjct: 19  NSNSNPKSLKSLDQKQIISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCH 78

Query: 106 RLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLK 165
            +  A+++F      N   +   I G+  S  + +A+ L+S +  +    + +   + LK
Sbjct: 79  AIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILK 138

Query: 166 VLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF---------- 215
              S         V +   KLG  SN  V   +++ +  CG +  AR+VF          
Sbjct: 139 ACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAK 198

Query: 216 ---------DGLF-NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAH 265
                    DG   N+    AL  F  M+    +PN FT   VL AC  L  + + +  H
Sbjct: 199 DTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVH 258

Query: 266 GCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSI 325
               K   E++L+V  AL+++Y++ G I  A+ +F+EM  +DVI ++ MI+  +    S 
Sbjct: 259 SYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSR 318

Query: 326 DAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI-HSLVVRVGLLSDVFVSNAL 384
            A+ELF  M    + P   TFV VL AC+    +D G +I HS+    G+   +     +
Sbjct: 319 QAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCM 378

Query: 385 MDVYAKCGRMENSVELFAE---SPKRNHVTWNTMIVG-----YVQLGEVGKAMIMFSKML 436
           +D+  + GR+E + +L      +P  +H+   T++        ++LGE        +K+L
Sbjct: 379 VDLLGRVGRLEEAYDLIRTMKMTP--DHIMLGTLLSACKMHKNLELGE------QVAKVL 430

Query: 437 EEQVPATEVTYSSVLRACASLAALEPGMQV 466
           E++  A   TY  +    AS    +   QV
Sbjct: 431 EDRGQADSGTYVLLSHVYASSGKWKEAAQV 460



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 124/245 (50%), Gaps = 5/245 (2%)

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
           IH+ ++R G   D F+   L+   +KC  ++ +  +F  +   N   +  +I G+V  G 
Sbjct: 51  IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 110

Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA 484
              A+ ++S+ML + +       +S+L+AC S  AL  G +VH   +K     + +V   
Sbjct: 111 YFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLR 170

Query: 485 LIDMYAKCGSITDARLVFDMMND----WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG 540
           ++++Y KCG + DAR VF+ M +     + V W AMI G+  +      L+ F  MQ   
Sbjct: 171 IMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGEN 230

Query: 541 WRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKA 600
            RPN  T V VLSACS  G LE G  +  S +  + IE  +    +++++  R G +D+A
Sbjct: 231 VRPNEFTIVCVLSACSQLGALEIGR-WVHSYMRKFEIELNLFVGNALINMYSRCGSIDEA 289

Query: 601 AKLIE 605
             + +
Sbjct: 290 QTVFD 294



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 35/173 (20%), Positives = 71/173 (41%), Gaps = 6/173 (3%)

Query: 464 MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMH 523
           + +H   ++  +  D  +   L+   +KC +I  A  +F   ++ N   + A+I G+   
Sbjct: 49  LPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSS 108

Query: 524 GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEH 583
           G   + ++++  M      P+N     +L AC +   L +G     S     G+      
Sbjct: 109 GNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGRE-VHSRALKLGLSSNRLV 167

Query: 584 YTSMVSLLGRAGHLDKAAKLIEGIP---FQPSVMIWRALLGACIIHNNVEIGR 633
              ++ L G+ G L  A ++ E +P        + W A++   +   N E+ R
Sbjct: 168 RLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFV--RNEEMNR 218


>gi|356570490|ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Glycine max]
          Length = 582

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 221/562 (39%), Positives = 328/562 (58%), Gaps = 14/562 (2%)

Query: 257 TIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIA 316
           ++R     HG  +K  +E    V   L++ Y+K+    ++ ++F+  P K    WS +I+
Sbjct: 22  SLRKGLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLFDSFPHKSATTWSSVIS 81

Query: 317 RYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLS 376
            +AQ DL + A+  F RM +  + P+  T  +  ++ A +  L L   +H+L ++     
Sbjct: 82  SFAQNDLPLPALRFFRRMLRHGLLPDDHTLPTAAKSVAALSSLPLALSLHALSLKTAHHH 141

Query: 377 DVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML 436
           DVFV ++L+D YAKCG +  + ++F E P +N V+W+ MI GY Q+G   +A+ +F + L
Sbjct: 142 DVFVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQMGLDEEALNLFKRAL 201

Query: 437 EEQ--VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGS 494
           E+   +   + T SSVLR C++    E G QVH L  K ++D    VA++LI +Y+KCG 
Sbjct: 202 EQDYDIRVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTSFDSSCFVASSLISLYSKCGV 261

Query: 495 ITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSA 554
           +     VF+ +   N   WNAM+   + H  +    ++F+ M++ G +PN +TF+ +L A
Sbjct: 262 VEGGYKVFEEVKVRNLGMWNAMLIACAQHAHTGRTFELFEEMERVGVKPNFITFLCLLYA 321

Query: 555 CSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVM 614
           CS+ GL+E+GE  F  ++  +GIEP  +HY ++V LLGRAG L++A  +I+ +P QP+  
Sbjct: 322 CSHAGLVEKGEHCF-GLMKEHGIEPGSQHYATLVDLLGRAGKLEEAVLVIKEMPMQPTES 380

Query: 615 IWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA------- 667
           +W ALL  C IH N E+    A  + +         VLLSN YA A  WE+AA       
Sbjct: 381 VWGALLTGCRIHGNTELASFVADKVFEMGAVSSGIQVLLSNAYAAAGRWEEAARARKMMR 440

Query: 668 ----SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLR 723
                KE GLSW+E    VH F AGD SH     I   LE L  +  KAGY+ D S VL+
Sbjct: 441 DQGIKKETGLSWVEEGNRVHTFAAGDRSHGKTREIYEKLEELGEEMAKAGYVADTSFVLK 500

Query: 724 DVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREI 783
           +V  DEK + +  HSE+LA+AF L   PP  PIR++KNLR+C DCHTAIK ISK   R I
Sbjct: 501 EVDGDEKSQTIRYHSERLAIAFGLITFPPEWPIRVMKNLRVCGDCHTAIKFISKCTGRVI 560

Query: 784 IIRDVHRFHHFQDGCCSCGDFW 805
           I+RD +RFH F+DG C+CGD+W
Sbjct: 561 IVRDNNRFHRFEDGKCTCGDYW 582



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 182/363 (50%), Gaps = 23/363 (6%)

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEA 226
           V KLG ++   V   LI+ +S       + K+FD                   ND    A
Sbjct: 33  VIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLFDSFPHKSATTWSSVISSFAQNDLPLPA 92

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           L FF +M   G  P++ T     K+   L ++ +A S H  +LKT +  D++V  +L+D 
Sbjct: 93  LRFFRRMLRHGLLPDDHTLPTAAKSVAALSSLPLALSLHALSLKTAHHHDVFVGSSLVDT 152

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR-MRQAF-VAPNQF 344
           Y K G+++ AR++F+EMP K+V+ WS MI  Y+Q  L  +A+ LF R + Q + +  N F
Sbjct: 153 YAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQMGLDEEALNLFKRALEQDYDIRVNDF 212

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           T  SVL+ C+     +LG Q+H L  +    S  FV+++L+ +Y+KCG +E   ++F E 
Sbjct: 213 TLSSVLRVCSASTLFELGKQVHGLCFKTSFDSSCFVASSLISLYSKCGVVEGGYKVFEEV 272

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
             RN   WN M++   Q    G+   +F +M    V    +T+  +L AC+    +E G 
Sbjct: 273 KVRNLGMWNAMLIACAQHAHTGRTFELFEEMERVGVKPNFITFLCLLYACSHAGLVEKGE 332

Query: 465 QVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDARLVF-DMMNDWNEVSWNAMISGYS 521
             HC  +   + ++    +   L+D+  + G + +A LV  +M     E  W A+++G  
Sbjct: 333 --HCFGLMKEHGIEPGSQHYATLVDLLGRAGKLEEAVLVIKEMPMQPTESVWGALLTGCR 390

Query: 522 MHG 524
           +HG
Sbjct: 391 IHG 393



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 172/385 (44%), Gaps = 19/385 (4%)

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
           L+  + +H QV+K G        + L+N Y K N    + KLFD  P ++  ++ + I  
Sbjct: 23  LRKGLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLFDSFPHKSATTWSSVISS 82

Query: 132 YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSN 191
           +  +   + A+  F  + R G   +        K + ++    L   + A   K  H  +
Sbjct: 83  FAQNDLPLPALRFFRRMLRHGLLPDDHTLPTAAKSVAALSSLPLALSLHALSLKTAHHHD 142

Query: 192 AFVGTALIDAFSVCGCVEFARKVFDGLFNDCF----------------EEALNFFSQM-- 233
            FVG++L+D ++ CG V  ARKVFD + +                   EEALN F +   
Sbjct: 143 VFVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQMGLDEEALNLFKRALE 202

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
           +    + N+FT + VL+ C       + K  HG   KT ++   +VA +L+ LY+K G +
Sbjct: 203 QDYDIRVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTSFDSSCFVASSLISLYSKCGVV 262

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
               ++FEE+  +++  W+ M+   AQ   +    ELF  M +  V PN  TF+ +L AC
Sbjct: 263 EGGYKVFEEVKVRNLGMWNAMLIACAQHAHTGRTFELFEEMERVGVKPNFITFLCLLYAC 322

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTW 412
           +    ++ G     L+   G+         L+D+  + G++E +V +  E P +     W
Sbjct: 323 SHAGLVEKGEHCFGLMKEHGIEPGSQHYATLVDLLGRAGKLEEAVLVIKEMPMQPTESVW 382

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLE 437
             ++ G    G    A  +  K+ E
Sbjct: 383 GALLTGCRIHGNTELASFVADKVFE 407



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 125/268 (46%), Gaps = 18/268 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           + H+  T+ +S      L  A+++H   LK  +  D+F  + L++ Y K   +  A K+F
Sbjct: 107 DDHTLPTAAKSVAALSSLPLALSLHALSLKTAHHHDVFVGSSLVDTYAKCGDVNLARKVF 166

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHEL--NPFAFTAFLKVLVSMGW 172
           DEMP +N +S+   I GY+      EA+ LF     + +++  N F  ++ L+V  +   
Sbjct: 167 DEMPHKNVVSWSGMIYGYSQMGLDEEALNLFKRALEQDYDIRVNDFTLSSVLRVCSASTL 226

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-------GLFN----D 221
            EL   V    +K   DS+ FV ++LI  +S CG VE   KVF+       G++N     
Sbjct: 227 FELGKQVHGLCFKTSFDSSCFVASSLISLYSKCGVVEGGYKVFEEVKVRNLGMWNAMLIA 286

Query: 222 CFEEA-----LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
           C + A        F +M  VG KPN  TF  +L AC     +   +   G   +   E  
Sbjct: 287 CAQHAHTGRTFELFEEMERVGVKPNFITFLCLLYACSHAGLVEKGEHCFGLMKEHGIEPG 346

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMP 304
                 L+DL  ++G++  A  + +EMP
Sbjct: 347 SQHYATLVDLLGRAGKLEEAVLVIKEMP 374


>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
          Length = 1091

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 240/736 (32%), Positives = 370/736 (50%), Gaps = 29/736 (3%)

Query: 97   LLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG-YTVSSQFVEAVGLFSTLHREGHEL 155
            L+ +YVK   +  A ++FD M  +  +     I G Y    +F E++ LF  +H  G   
Sbjct: 356  LVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAP 415

Query: 156  NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF 215
            +  A +  LK +  +  A         + KLG  +   V  ALI  ++    +  A  VF
Sbjct: 416  DEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVF 475

Query: 216  DGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIR 259
            + +                 N    EA+  F +M   G + ++ T   VL AC       
Sbjct: 476  NRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWF 535

Query: 260  VAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYA 319
              +  HG ++KT    +  +A ALLD+Y+   +  +  +IF  M +K+V+ W+ MI  Y 
Sbjct: 536  AGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYM 595

Query: 320  QTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVF 379
            +  L      L   M    + P+ F   S L A A  E L  G  +H   +R G+   + 
Sbjct: 596  RAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLP 655

Query: 380  VSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ 439
            V+NALM++Y KC  +E +  +F     ++ ++WNT+I GY +     ++  +FS ML + 
Sbjct: 656  VANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDMLLQF 715

Query: 440  VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR 499
             P   VT + +L A AS+++LE G ++H   ++  +  D   +NAL+DMY KCG++  AR
Sbjct: 716  RP-NAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVAR 774

Query: 500  LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGG 559
            ++FD +   N +SW  MI+GY MHG     + +F+ M+  G  P+  +F  +L AC + G
Sbjct: 775  VLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSG 834

Query: 560  LLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRAL 619
            L  +G  +FK+M   Y IEP ++HYT +V LL R G L +A + IE +P +P   IW +L
Sbjct: 835  LAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSL 894

Query: 620  LGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAAS 668
            L  C IH NV++    A  +   EPE+   +VLL+NIYA A  WE           +   
Sbjct: 895  LHGCRIHKNVKLAEKVADKVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLR 954

Query: 669  KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVRED 728
            +  G SWIE +  VH F A + +H D N I   L+ +  + R+ G+ P     L    + 
Sbjct: 955  ENTGYSWIEVRSKVHVFIADNRNHPDWNRIAEFLDDVARRMRQEGHDPKKKYALMGADDA 1014

Query: 729  EKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDV 788
              +  L  HS KLA+AF +  +P   PIR+ KN ++C  CH A K ISK+  REII+RD 
Sbjct: 1015 VHDEALCGHSSKLAVAFGVLNLPEGRPIRVTKNSKVCSHCHEAAKFISKMCNREIILRDS 1074

Query: 789  HRFHHFQDGCCSCGDF 804
             RFH F+ G CSC  +
Sbjct: 1075 SRFHRFEGGRCSCRGY 1090



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 156/539 (28%), Positives = 262/539 (48%), Gaps = 30/539 (5%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           ++H+ +  L+       L     IH  + K G        N L+ VY +  R+ DA ++F
Sbjct: 203 DAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVF 262

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D M  R+ IS+ + I G   +     AV LFS +  +G E++     + L     +G+  
Sbjct: 263 DSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGL 322

Query: 175 LCPCVFACVYK----LGHDS------NAFVGTALIDAFSVCGCVEFARKVFDGLFNDC-- 222
           +   V     K     G DS      +A +G+ L+  +  CG +  AR+VFD + +    
Sbjct: 323 IGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNV 382

Query: 223 ---------------FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGC 267
                          FEE+L+ F QM  +G  P+    + +LK    L   R    AHG 
Sbjct: 383 HVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGY 442

Query: 268 ALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDA 327
            +K  +     V  AL+  Y KS  I +A  +F  MP++D I W+ +I+  +   L+ +A
Sbjct: 443 IVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEA 502

Query: 328 VELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDV 387
           +ELF RM       +  T +SVL ACA       G  +H   V+ GL+ +  ++NAL+D+
Sbjct: 503 IELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDM 562

Query: 388 YAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTY 447
           Y+ C   +++ ++F    ++N V+W  MI  Y++ G   K   +  +M+ + +       
Sbjct: 563 YSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAV 622

Query: 448 SSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND 507
           +S L A A   +L+ G  VH  T++   +  + VANAL++MY KC ++ +ARL+FD + +
Sbjct: 623 TSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTN 682

Query: 508 WNEVSWNAMISGYSMHGLSAEVLKVF-DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE 565
            + +SWN +I GYS +    E   +F D++ Q  +RPN +T   +L A ++   LE+G 
Sbjct: 683 KDVISWNTLIGGYSRNNFPNESFSLFSDMLLQ--FRPNAVTMTCILPAAASISSLERGR 739



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 168/627 (26%), Positives = 283/627 (45%), Gaps = 46/627 (7%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLK--------KGNCLDLFATNVLLNVYVKLNRLP 108
            SY   +Q C +   L+ A   H  +          KG+ L       L+  Y+K   L 
Sbjct: 98  RSYCMVVQLCGEERSLEAAKRAHALIRASSAAATGGKGSVLG----KRLVLAYLKCGDLG 153

Query: 109 DATKLFDEMPER--NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV 166
           +A  +FD MP +  +   + + +  Y  +  F EAV LF  +   G   +  A +  LK 
Sbjct: 154 EARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKC 213

Query: 167 LVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------- 216
           + S+G       +   + KLG      V  ALI  +S CG +E A +VFD          
Sbjct: 214 VSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISW 273

Query: 217 -GLFNDCFEE-----ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALK 270
             +   CF       A++ FS+M + G + ++ T   VL AC GL    + K+ HG ++K
Sbjct: 274 NSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVK 333

Query: 271 TCYEM----------DLYVAVALLDLYTKSGEISNARRIFEEMPKK-DVIPWSFMIARYA 319
           +              D  +   L+ +Y K G++++ARR+F+ M  K +V  W+ ++  YA
Sbjct: 334 SGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYA 393

Query: 320 QTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVF 379
           +     +++ LF +M +  +AP++     +L+    +     G   H  +V++G  +   
Sbjct: 394 KVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCA 453

Query: 380 VSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ 439
           V NAL+  YAK   + ++V +F   P+++ ++WN++I G    G   +A+ +F +M  + 
Sbjct: 454 VCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQG 513

Query: 440 VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR 499
                VT  SVL ACA       G  VH  +VK     +  +ANAL+DMY+ C       
Sbjct: 514 QELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTN 573

Query: 500 LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGG 559
            +F  M   N VSW AMI+ Y   GL  +V  +   M   G RP+       L A +   
Sbjct: 574 QIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDE 633

Query: 560 LLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRAL 619
            L+QG++     + N G+E  +    +++ +  +  ++++ A+LI        V+ W  L
Sbjct: 634 SLKQGKSVHGYTIRN-GMEKLLPVANALMEMYVKCRNVEE-ARLIFDRVTNKDVISWNTL 691

Query: 620 LGACIIHNNV--EIGRLSAQHILDFEP 644
           +G     NN   E   L +  +L F P
Sbjct: 692 IGG-YSRNNFPNESFSLFSDMLLQFRP 717



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/470 (25%), Positives = 215/470 (45%), Gaps = 21/470 (4%)

Query: 73  QTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGY 132
           +  +  H  ++K G        N L++ Y K N + DA  +F+ MP ++TIS+ + I G 
Sbjct: 434 RDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGC 493

Query: 133 TVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNA 192
           + +    EA+ LF  +  +G EL+     + L       +      V     K G     
Sbjct: 494 SSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGET 553

Query: 193 FVGTALIDAFSVCGCVEFARKVFDGLFND----------------CFEEALNFFSQMRAV 236
            +  AL+D +S C   +   ++F  +                    F++      +M   
Sbjct: 554 SLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLD 613

Query: 237 GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNA 296
           G +P+ F     L A  G ++++  KS HG  ++   E  L VA AL+++Y K   +  A
Sbjct: 614 GIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEA 673

Query: 297 RRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM 356
           R IF+ +  KDVI W+ +I  Y++ +   ++  LF  M   F  PN  T   +L A A++
Sbjct: 674 RLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDMLLQF-RPNAVTMTCILPAAASI 732

Query: 357 EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMI 416
             L+ G +IH+  +R G L D + SNAL+D+Y KCG +  +  LF    K+N ++W  MI
Sbjct: 733 SSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMI 792

Query: 417 VGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD 476
            GY   G    A+ +F +M    +     ++S++L AC        G +     ++  Y 
Sbjct: 793 AGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFF-KAMQKEYK 851

Query: 477 MDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
           ++  + +   ++D+ ++ G + +A   +  M  + +   W +++ G  +H
Sbjct: 852 IEPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHGCRIH 901



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 51/102 (50%)

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
           L+    IH   L++G   D +A+N L+++YVK   L  A  LFD + ++N IS+   I G
Sbjct: 735 LERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAG 794

Query: 132 YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           Y +      A+ LF  +   G E +  +F+A L      G A
Sbjct: 795 YGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLA 836


>gi|356503769|ref|XP_003520676.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Glycine max]
          Length = 874

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 260/816 (31%), Positives = 399/816 (48%), Gaps = 71/816 (8%)

Query: 56  SHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFD 115
           SHS   +L    ++ D   A T+H  +LK+    D   +N L++ Y+KLN  P A +LF 
Sbjct: 64  SHSLLHALHVSSRSGDTHLAKTVHATLLKRDE-EDTHLSNALISTYLKLNLFPHALRLFL 122

Query: 116 EMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGH-ELNPFAFTAFLKVLVS-MGWA 173
            +P  N +S+ T I   +   Q   A+ LF  +    H   N + + A L    S +   
Sbjct: 123 SLPSPNVVSYTTLISFLSKHRQH-HALHLFLRMTTRSHLPPNEYTYVAVLTACSSLLHHF 181

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD----------------G 217
                + A   K  H  + FV  AL+  ++       A K+F+                 
Sbjct: 182 HFGLQLHAAALKTAHFDSPFVANALVSLYAKHASFHAALKLFNQIPRRDIASWNTIISAA 241

Query: 218 LFNDCFEEALNFFSQMRAV-GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
           L +  ++ A   F  M+A   F+ ++FT + +L A   L      +  H  A+K   E D
Sbjct: 242 LQDSLYDTAFRLFRNMQATDAFRVDDFTLSILLTASASL---MEGQQVHAHAVKLGLETD 298

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDL------------- 323
           L V   L+  Y+K G + +   +FE M  +DVI W+ M+  Y +  L             
Sbjct: 299 LNVGNGLIGFYSKFGNVDDVEWLFEGMRVRDVITWTEMVTAYMEFGLVNLALKVFDEMPE 358

Query: 324 ------------------SIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
                               +A+ LF RM +  +    F+  SV+ AC  +    +  Q+
Sbjct: 359 KNSVSYNTVLAGFCRNEQGFEAMRLFVRMVEEGLELTDFSLTSVVDACGLLGDYKVSKQV 418

Query: 366 HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA--ESPKRNHVTWNTMIVGYVQLG 423
           H   V+ G  S+ +V  AL+D+Y +CGRM ++ ++F   E  + + V W  MI GY + G
Sbjct: 419 HGFAVKFGFGSNGYVEAALLDMYTRCGRMVDAGKMFLRWELEEFSSVVWTAMICGYARNG 478

Query: 424 EVGKAMIMFS-KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
           +  +A+ +F     + +V   EV  +S+L  C ++  L+ G Q+HC  +K     ++ V 
Sbjct: 479 QPEEAIYLFHVGRSDGKVIMDEVAAASMLGLCGTIGHLDMGKQIHCHVIKCGLGFNLEVG 538

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
           NA++ MY KCGS+ DA  VF  M   + V+WN +ISG  MH      L+++  M   G +
Sbjct: 539 NAVVSMYFKCGSVDDAMKVFGDMPCTDIVTWNTLISGNLMHRQGDRALEIWVEMLGEGIK 598

Query: 543 PNNLTFVGVLSAC--SNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKA 600
           PN +TFV ++SA   +N  L++     F SM   Y IEP   HY S +S+LG  G L +A
Sbjct: 599 PNQVTFVLIISAYRQTNLNLVDDCRNLFNSMRTVYQIEPTSRHYASFISVLGHWGLLQEA 658

Query: 601 AKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMA 660
            + I  +PFQPS ++WR LL  C +H N  IG+ +AQ+IL  EP+D +T +L+SN+Y+ +
Sbjct: 659 LETINNMPFQPSALVWRVLLDGCRLHKNELIGKWAAQNILALEPKDPSTFILVSNLYSAS 718

Query: 661 RSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKS 709
             W           EK   K P  SWI  +  ++ F   D SH     I+  LE L ++ 
Sbjct: 719 GRWDRSEMVREDMREKGFRKHPAQSWIVCEKKINSFYPRDRSHPQEKDIQRGLEILILEC 778

Query: 710 RKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCH 769
            K GY PD S VL +V E  K+ +L+ HS KLA  + +    P  PIRI+KN+ +C DCH
Sbjct: 779 LKIGYEPDTSFVLHEVEEHHKKIFLFHHSAKLAATYGILMTKPGKPIRIVKNILLCGDCH 838

Query: 770 TAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
             +K  S + +R+I +RD   FH F +G CSC D W
Sbjct: 839 AFLKYASIVTKRDIFLRDSSGFHCFSNGQCSCKDCW 874


>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
          Length = 649

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 241/642 (37%), Positives = 353/642 (54%), Gaps = 47/642 (7%)

Query: 211 ARKVFDGLFNDCF----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHG 266
           AR++ +G+   C     E+A+  +++M A G  P+ +TF  +LKA     +    ++ H 
Sbjct: 8   ARRLLEGIPRRCLVAAREDAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHA 67

Query: 267 CALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSID 326
             +K     + +VA +L+  Y   G+ + AR +  E  +   + W+ +I+ + +     +
Sbjct: 68  HVVKFGMGRNAHVATSLVTAYAAGGDGAAARALLSERERDTPVVWNALISGHNRCRRFGE 127

Query: 327 AVELFCRMRQAFVAPNQFTFVSVLQACATMEG-LDLGNQIHSLVVRVGLLSDVFVSNALM 385
           A   F  M +A  AP   T+VSVL AC    G + LG Q+H  VV  G+L D+ V NAL+
Sbjct: 128 ACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVENALV 187

Query: 386 DVYAKC-------------------------------GRMENSVELFAESPKRNHVTWNT 414
           D+YA+C                               GR++ + +LF   P+R+ V+W  
Sbjct: 188 DMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTA 247

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
           MI GYVQ     +A+ MF +M    V A E T  SV+ ACA L ALE G  V     +  
Sbjct: 248 MIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQG 307

Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
             MD  V NALIDMY+KCGSI  A  VF  M+  ++ +W A+I G +++G   E +++F 
Sbjct: 308 IKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFH 367

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
            M      P+ +TF+GVL+AC++ GL+++G  +F SM   Y I P + HY  ++ L GRA
Sbjct: 368 RMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLFGRA 427

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLS 654
           G + +A   I+ +P  P+  IW  LL AC +H N EIG L  + +L  +PE+   + LLS
Sbjct: 428 GKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVTERLLQMDPENSTVYTLLS 487

Query: 655 NIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLE 703
           NIYA    W           EK   KEPG S IE  G++H F AGD SH     I   LE
Sbjct: 488 NIYAKCNRWEDVRRLRHTIMEKGIKKEPGCSLIEMNGIIHEFVAGDQSHPMSKEIYCKLE 547

Query: 704 WLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLR 763
            +       GY PD++ V  +V E+EK++ L+ HSEKLA+AFAL    P++ IRI+KNLR
Sbjct: 548 SIINDLNNVGYFPDVTEVFVEVAEEEKQKVLFWHSEKLAIAFALLSSEPNTVIRIVKNLR 607

Query: 764 ICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +C+DCH AIK+IS++  RE+++RD  RFHHF+ G CSC D+W
Sbjct: 608 MCLDCHNAIKLISRLYGREVVVRDRTRFHHFRHGFCSCKDYW 649



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 92/394 (23%), Positives = 165/394 (41%), Gaps = 72/394 (18%)

Query: 40  SNSTTTPITFSVSEFNSHSYATSLQSCIQN-DDLQTAMTIHCQVLKKGNCLDLFATNVLL 98
           + +  TP+T          Y + L +C +   D+   M +H +V+  G   DL   N L+
Sbjct: 138 AGAAPTPVT----------YVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVENALV 187

Query: 99  NVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPF 158
           ++Y +   +  A KLFD M  R+ +S+ + + G T   +  EA  LF  +          
Sbjct: 188 DMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERD------ 241

Query: 159 AFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL 218
                     ++ W                       TA+ID +     V+ AR      
Sbjct: 242 ----------TVSW-----------------------TAMIDGY-----VQAAR------ 257

Query: 219 FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
               F EAL  F +M+      + FT   V+ AC  L  + + +       +   +MD +
Sbjct: 258 ----FREALEMFREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAF 313

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V  AL+D+Y+K G I  A  +F++M  +D   W+ +I   A      +A+E+F RM    
Sbjct: 314 VGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVS 373

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIH-SLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
             P++ TF+ VL AC     +D G +   S+     +  +V     ++D++ + G++  +
Sbjct: 374 ETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEA 433

Query: 398 VELFAESP-KRNHVTWNTMIV-----GYVQLGEV 425
           ++   + P   N   W T++      G  ++GE+
Sbjct: 434 LDAIDQMPMTPNSTIWGTLLAACRVHGNSEIGEL 467



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 10/111 (9%)

Query: 38  QCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVL 97
           QCSN        S  EF   S  T+   C Q   L+    +   + ++G  +D F  N L
Sbjct: 269 QCSN-------VSADEFTMVSVITA---CAQLGALEMGEWVRVYMSRQGIKMDAFVGNAL 318

Query: 98  LNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTL 148
           +++Y K   +  A  +F +M  R+  ++   I G  V+    EA+ +F  +
Sbjct: 319 IDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRM 369


>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
           [Vitis vinifera]
 gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
          Length = 595

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 214/564 (37%), Positives = 335/564 (59%), Gaps = 15/564 (2%)

Query: 257 TIRVAKSAHGCALKTCYEMDLYVAVALLD---LYTKSGEISNARRIFEEMPKKDVIPWSF 313
           ++R  K     A+KT    DL V    ++   L   +  + +A  +F+++P+ D++ ++ 
Sbjct: 32  SLRELKQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQIPQPDIVLFNT 91

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
           M   YA+TD  + A  LF ++  + + P+ +TF S+L+ACA+ + L+ G Q+H L +++G
Sbjct: 92  MARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEGRQLHCLAIKLG 151

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
           L  +V+V   L+++Y  C  M+ +  +F +  +   VT+N MI GY +     +A+ +F 
Sbjct: 152 LSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARGSRPNEALSLFR 211

Query: 434 KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCG 493
           ++    +  T+VT  SVL +CA L AL+ G  +H    K  ++  V V  ALIDMYAKCG
Sbjct: 212 ELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCG 271

Query: 494 SITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLS 553
           S+ DA  VF+ M   +  +W+AMI  Y++HG   + + +F  M++ G  P+ +TF+G+L 
Sbjct: 272 SLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLY 331

Query: 554 ACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSV 613
           ACS+ GL+E+G  YF  M   YG+ P I+HY  MV LLGRAG L++A + I G+P +P+ 
Sbjct: 332 ACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTP 391

Query: 614 MIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW---------- 663
           ++WR LL AC  H NVE+G+   + I + +      +++LSN+ A A  W          
Sbjct: 392 ILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYIILSNLCARAGRWEDVNYVRKLM 451

Query: 664 -EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVL 722
            E+   K PG S +E   +VH F +GD  H+    +   L+ L  + +  GY+P+ S V 
Sbjct: 452 NERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQALDELVKELKLVGYVPNTSLVF 511

Query: 723 R-DVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQR 781
             D+ ++EKE  L  HSEKLA+ F L   PP + IR++KNLR+C DCH+A K+IS I  R
Sbjct: 512 HADMEDEEKEVTLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCHSAAKLISLIFDR 571

Query: 782 EIIIRDVHRFHHFQDGCCSCGDFW 805
           +II+RDV RFHHF+DG CSC D+W
Sbjct: 572 QIILRDVQRFHHFKDGKCSCEDYW 595



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 160/322 (49%), Gaps = 6/322 (1%)

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
            A   F+Q+   G  P+++TF  +LKAC     +   +  H  A+K     ++YV   L+
Sbjct: 104 RAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEGRQLHCLAIKLGLSENVYVCPTLI 163

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
           ++YT   E+  ARR+F+++ +  V+ ++ MI  YA+     +A+ LF  ++   + P   
Sbjct: 164 NMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARGSRPNEALSLFRELQARNLKPTDV 223

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           T +SVL +CA +  LDLG  +H  V + G    V V  AL+D+YAKCG ++++V +F   
Sbjct: 224 TMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENM 283

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
             R+   W+ MI+ Y   G   KA+ +F +M +      E+T+  +L AC+    +E G 
Sbjct: 284 AVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGF 343

Query: 465 Q-VHCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSM 522
           +  + +  K      +     ++D+  + G + +A   +  +      + W  ++S    
Sbjct: 344 EYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGS 403

Query: 523 HG---LSAEVL-KVFDLMQQRG 540
           HG   L   V+ ++F+L    G
Sbjct: 404 HGNVELGKRVIEQIFELDDSHG 425



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 160/341 (46%), Gaps = 20/341 (5%)

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A  LFD++P+ + + F T  +GY  +   + A  LF+ +   G   + + F + LK   S
Sbjct: 74  AHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACAS 133

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF------ 223
               E    +     KLG   N +V   LI+ ++ C  ++ AR+VFD ++  C       
Sbjct: 134 CKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAM 193

Query: 224 ----------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY 273
                      EAL+ F +++A   KP + T   VL +C  L  + + K  H    K  +
Sbjct: 194 ITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGF 253

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
              + V  AL+D+Y K G + +A  +FE M  +D   WS MI  YA     + AV LF  
Sbjct: 254 NRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKE 313

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQ-IHSLVVRVGLLSDVFVSNALMDVYAKCG 392
           MR+A   P++ TF+ +L AC+    ++ G +  + +  + G++  +     ++D+  + G
Sbjct: 314 MRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAG 373

Query: 393 RMENSVELFAESPKR-NHVTWNTMIVGYVQLG--EVGKAMI 430
           R+E + E     P R   + W T++      G  E+GK +I
Sbjct: 374 RLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVI 414



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 100/462 (21%), Positives = 188/462 (40%), Gaps = 65/462 (14%)

Query: 45  TPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKL 104
           T I FS    + +++ + L++C     L+    +HC  +K G   +++    L+N+Y   
Sbjct: 110 TQILFSGLFPDDYTFPSLLKACASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTAC 169

Query: 105 NRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFL 164
           N +  A ++FD++ E   +++   I GY   S+  EA+ LF  L  +   L P   T  L
Sbjct: 170 NEMDCARRVFDKIWEPCVVTYNAMITGYARGSRPNEALSLFREL--QARNLKPTDVT-ML 226

Query: 165 KVLVS---MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL--- 218
            VL S   +G  +L   +   V K G +    V TALID ++ CG ++ A  VF+ +   
Sbjct: 227 SVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVR 286

Query: 219 -------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAH 265
                         +    +A++ F +MR  G +P+  TF  +L AC           +H
Sbjct: 287 DTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYAC-----------SH 335

Query: 266 GCALKTCYEM-----DLYVAVA-------LLDLYTKSGEISNARRIFEEMP-KKDVIPWS 312
              ++  +E      D Y  +        ++DL  ++G +  A      +P +   I W 
Sbjct: 336 TGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPILWR 395

Query: 313 FMIA---RYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSL- 368
            +++    +   +L    +E    +  +        ++ +   CA     +  N +  L 
Sbjct: 396 TLLSACGSHGNVELGKRVIEQIFELDDSHGG----DYIILSNLCARAGRWEDVNYVRKLM 451

Query: 369 ----VVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
               VV++   S V V+N + + ++  G    S +L       + +     +VGYV    
Sbjct: 452 NERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQ---ALDELVKELKLVGYVP--- 505

Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
              +++  + M +E+   T   +S  L     L    PG  +
Sbjct: 506 -NTSLVFHADMEDEEKEVTLRYHSEKLAITFGLLNTPPGTTI 546


>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
 gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 606

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 214/512 (41%), Positives = 308/512 (60%), Gaps = 13/512 (2%)

Query: 307 DVIPWSFMIARYAQTDLSID-AVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
           D   ++ +I  YAQT  S D A+ L+  M    + PN+FT+  VL+ACA +E L+LG  +
Sbjct: 95  DAFLFNTLIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTV 154

Query: 366 HSLVVRVGLLSDVFVSNALMDVYAKC-GRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
           H  VV+ G   D+ V N ++ +Y+ C G + ++ ++F E PK + VTW+ MI GY ++G 
Sbjct: 155 HGSVVKFGFDCDIHVQNTMVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGR 214

Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA 484
             +A+ +F +M   +V   E+T  S+L AC  L ALE G  +     +      V V+NA
Sbjct: 215 STEAVALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERHEIHKPVEVSNA 274

Query: 485 LIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPN 544
           LIDM+AKCG I+ A  +F  MN+   VSW ++I G +MHG   E   +F+ M   G  P+
Sbjct: 275 LIDMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPD 334

Query: 545 NLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLI 604
           ++ F+G+LSACS+ GL+E+G  YF SM+  Y + P IEHY  MV +  R G + +A + +
Sbjct: 335 DVAFIGLLSACSHSGLVERGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFV 394

Query: 605 EGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE 664
             +P +P+ +I R L+ AC  H   ++G    + ++  EP  E+ +VLLSNIYA   SWE
Sbjct: 395 RNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMKHEPLHESNYVLLSNIYAKTLSWE 454

Query: 665 KAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAG 713
           K              K PG + IE    ++ F AGD SH     I  M++ +  + +K+G
Sbjct: 455 KKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQHKEIYEMVDEMGREMKKSG 514

Query: 714 YIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIK 773
           Y P  S VL D+ E++KE  L  HSEKLA+AF L + PP +PIRI+KNLR+C DCH+A K
Sbjct: 515 YRPSTSEVLLDINEEDKEDSLNRHSEKLAIAFGLLRTPPGTPIRIVKNLRVCSDCHSASK 574

Query: 774 IISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            ISKI  REII+RD +RFHHF+ G CSCGDFW
Sbjct: 575 FISKIYDREIIMRDRNRFHHFKSGQCSCGDFW 606



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 190/367 (51%), Gaps = 26/367 (7%)

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFA----------RKVFDG-LFNDCF-------- 223
           + KLG  +N  V T      S+    ++A           +++D  LFN           
Sbjct: 52  ILKLGLHNNPLVLTKFASISSLIHATDYAASFLFSAEADTRLYDAFLFNTLIRAYAQTGH 111

Query: 224 --EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
             ++AL  +  M      PN FT+ FVLKAC GL+ + + ++ HG  +K  ++ D++V  
Sbjct: 112 SKDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTVHGSVVKFGFDCDIHVQN 171

Query: 282 ALLDLYTK-SGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
            ++ +Y+  +G I++AR++F+EMPK D + WS MI  YA+   S +AV LF  M+ A V 
Sbjct: 172 TMVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVC 231

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           P++ T VS+L AC  +  L+LG  I + + R  +   V VSNAL+D++AKCG +  +++L
Sbjct: 232 PDEITMVSMLSACTDLGALELGKWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKL 291

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F    ++  V+W ++IVG    G   +A  +F +M    V   +V +  +L AC+    +
Sbjct: 292 FRAMNEKTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDDVAFIGLLSACSHSGLV 351

Query: 461 EPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMI 517
           E G +     +K  Y +   + +   ++DMY + G + +A   V +M  + N V    ++
Sbjct: 352 ERGREYFGSMMK-KYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLV 410

Query: 518 SGYSMHG 524
           S    HG
Sbjct: 411 SACRGHG 417



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 102/418 (24%), Positives = 177/418 (42%), Gaps = 46/418 (11%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK-----LFD-E 116
           LQ+C   + L     IH  +LK G    L    ++L  +  ++ L  AT      LF  E
Sbjct: 36  LQAC---NALPKLTQIHTHILKLG----LHNNPLVLTKFASISSLIHATDYAASFLFSAE 88

Query: 117 MPER--NTISFVTTIQGYTVSSQFVE-AVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
              R  +   F T I+ Y  +    + A+ L+  +  +    N F +   LK    +   
Sbjct: 89  ADTRLYDAFLFNTLIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVL 148

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVC-GCVEFARKVFDGL-FNDCF-------- 223
            L   V   V K G D +  V   ++  +S C G +  ARKVFD +  +D          
Sbjct: 149 NLGQTVHGSVVKFGFDCDIHVQNTMVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGG 208

Query: 224 -------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
                   EA+  F +M+     P+  T   +L AC  L  + + K       +      
Sbjct: 209 YARVGRSTEAVALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERHEIHKP 268

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           + V+ AL+D++ K G+IS A ++F  M +K ++ W+ +I   A      +A  LF  M  
Sbjct: 269 VEVSNALIDMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAMHGRGQEATCLFEEMTS 328

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQ-IHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
           + VAP+   F+ +L AC+    ++ G +   S++ +  L+  +     ++D+Y + G ++
Sbjct: 329 SGVAPDDVAFIGLLSACSHSGLVERGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLVK 388

Query: 396 NSVELFAESP-KRNHVTWNTMIV-----GYVQLGEVGKAMIMFSKMLEEQVPATEVTY 447
            ++E     P + N V   T++      G  +LGE        +K+L +  P  E  Y
Sbjct: 389 EALEFVRNMPIEPNPVILRTLVSACRGHGEFKLGE------KITKLLMKHEPLHESNY 440



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 84/361 (23%), Positives = 142/361 (39%), Gaps = 67/361 (18%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVY-VKLNRLPDATKL 113
           N  +Y   L++C   + L    T+H  V+K G   D+   N ++++Y      +  A K+
Sbjct: 131 NKFTYPFVLKACAGLEVLNLGQTVHGSVVKFGFDCDIHVQNTMVHMYSCCAGGINSARKV 190

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           FDEMP+ +++++   I GY    +  EAV LF  +       +     + L     +G  
Sbjct: 191 FDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSMLSACTDLGAL 250

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF---------- 223
           EL   + A + +        V  ALID F+ CG +  A K+F  +               
Sbjct: 251 ELGKWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGM 310

Query: 224 ------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
                 +EA   F +M + G  P++  F  +L AC                         
Sbjct: 311 AMHGRGQEATCLFEEMTSSGVAPDDVAFIGLLSAC------------------------- 345

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKK-DVIP----WSFMIARYAQTDLSIDAVELFC 332
                     + SG +   R  F  M KK  ++P    +  M+  Y +T L  +A+E   
Sbjct: 346 ----------SHSGLVERGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEF-- 393

Query: 333 RMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD---VFVSNALMDVYA 389
            +R   + PN     +++ AC       LG +I  L+++   L +   V +SN    +YA
Sbjct: 394 -VRNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMKHEPLHESNYVLLSN----IYA 448

Query: 390 K 390
           K
Sbjct: 449 K 449


>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 770

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 236/696 (33%), Positives = 359/696 (51%), Gaps = 41/696 (5%)

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
           +EG  +    +   L   +  G       +   + K G   + FV T+L++ +  CG  +
Sbjct: 71  KEGQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQ 130

Query: 210 FARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL 253
            AR +FD +                 N     AL  F +M  +G  P+++T   +L AC+
Sbjct: 131 DARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACV 190

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSF 313
               I + K  HG  +K        +  +L  LYTKSG + +  R F+ +P K+VI W+ 
Sbjct: 191 ASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTT 250

Query: 314 MIARYAQTDLSID-AVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV 372
           MI+  A+ +   +  + LF  M +  V PN+FT  SV+  C T   ++LG Q+     ++
Sbjct: 251 MISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKI 310

Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK----- 427
           G  +++ V N+ M +Y + G  E ++ LF E    + +TWN MI G+ Q+ +  K     
Sbjct: 311 GCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHA 370

Query: 428 ------AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVV 481
                 A+ +F  ++   +     T+SS+L  C+++ ALE G Q+H  T+K  +  DVVV
Sbjct: 371 RSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVV 430

Query: 482 ANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW 541
            +AL++MY KCG I  A   F  M     V+W +MISGYS HG   + +++F+ M   G 
Sbjct: 431 NSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGA 490

Query: 542 RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAA 601
           +PN +TFV +LSACS  GL+E+   YF  M   Y IEP ++HY  M+ +  R G LD A 
Sbjct: 491 KPNEITFVSLLSACSYAGLVEEAMRYFDMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAY 550

Query: 602 KLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMAR 661
             I+   F+P+  IW +L+  C  H N+E+   +A  +L+ +P+   T+VLL N+Y    
Sbjct: 551 AFIKRKGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVVETYVLLLNMYISTG 610

Query: 662 SWEKAA-----SKEPGL------SWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSR 710
            W   A     SK   L      SWI  +  V++F+A D SH     +  +LE L  K++
Sbjct: 611 RWRDVARVRKLSKHEDLGILRDRSWITIRDKVYFFKADDRSHPQSTELYQLLETLLEKAK 670

Query: 711 KAGYIPDLSAVLRDVREDEKER--YLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDC 768
             GY P  +  L D  ED K     L  HSE+LA+A  L K PP   +RI KN+ +C DC
Sbjct: 671 AIGYEPYQNTELYDSEEDGKPAAGSLKHHSERLAVALGLLKAPPGVTVRITKNITMCRDC 730

Query: 769 HTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
           H++IK  S +  REI++RD  R H F+DG CSCGDF
Sbjct: 731 HSSIKFFSLLANREIVVRDSKRLHKFKDGRCSCGDF 766



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 157/542 (28%), Positives = 258/542 (47%), Gaps = 43/542 (7%)

Query: 14  QLTHQSKINAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQ 73
           Q+    ++ A  R L AQ A++  +   S  + +           Y   L  CI+   L 
Sbjct: 47  QVLENGRLEAPPRPLDAQEAMAMLKEGQSVQSAM-----------YVPLLHRCIETGSLG 95

Query: 74  TAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYT 133
            A  +H  ++K G  +D+F    L+NVY++     DA  LFDEMPE+N +++   I GYT
Sbjct: 96  GAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPEKNVVTWTALITGYT 155

Query: 134 VSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAF 193
           ++SQ V A+ +F  + + G   + +     L   V+    +L   V     K G  S   
Sbjct: 156 LNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAASITS 215

Query: 194 VGTALIDAFSVCGCVEFARKVFD-----------GLFNDCFEE------ALNFFSQMRAV 236
           +G +L   ++  G +E   + F             + + C E+       LN F  M   
Sbjct: 216 IGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDENYTELGLNLFLDMLKG 275

Query: 237 GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNA 296
              PN FT   V+  C     + + K   G   K     +L V  + + LY + GE   A
Sbjct: 276 EVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEA 335

Query: 297 RRIFEEMPKKDVIPWSFMIARYAQT------DL-----SIDAVELFCRMRQAFVAPNQFT 345
            R+FEEM    VI W+ MI+ +AQ       DL        A+++F  + ++ + P+ FT
Sbjct: 336 MRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFT 395

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           F S+L  C+TM  L+ G QIH+  ++ G LSDV V++AL+++Y KCG +E + + F E P
Sbjct: 396 FSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMP 455

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
            R  VTW +MI GY Q G    A+ +F  M+       E+T+ S+L AC+    +E  M+
Sbjct: 456 TRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMR 515

Query: 466 VHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDARLVFDMMN-DWNEVSWNAMISGYSM 522
              + ++  Y ++ ++ +   +IDM+ + G + DA         + NE  W+++++G   
Sbjct: 516 YFDM-MQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRS 574

Query: 523 HG 524
           HG
Sbjct: 575 HG 576



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 99/199 (49%), Gaps = 3/199 (1%)

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGS 494
           ML+E        Y  +L  C    +L     +H   VK    +D+ VA +L+++Y +CG+
Sbjct: 69  MLKEGQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGN 128

Query: 495 ITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSA 554
             DAR +FD M + N V+W A+I+GY+++      L+VF  M + G  P++ T  G+LSA
Sbjct: 129 SQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSA 188

Query: 555 CSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVM 614
           C     ++ G+      +  YG         S+  L  ++G+L+   +  + IP   +V+
Sbjct: 189 CVASHNIDLGKQVHGYTI-KYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIP-DKNVI 246

Query: 615 IWRALLGACIIHNN-VEIG 632
            W  ++ AC    N  E+G
Sbjct: 247 TWTTMISACAEDENYTELG 265


>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Glycine max]
          Length = 635

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 239/629 (37%), Positives = 339/629 (53%), Gaps = 41/629 (6%)

Query: 188 HDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAF 247
           +++N      LI ++  CG ++ A +VF+ +     +  + + S + A   KP +F +A 
Sbjct: 37  NNNNVIASNKLIASYVRCGDIDSAVRVFEDMK---VKSTVTWNSILAAFAKKPGHFEYAR 93

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
            L      + I    +     +  C+   L V               +AR  F+ MP KD
Sbjct: 94  QL-----FEKIPQPNTVSYNIMLACHWHHLGV--------------HDARGFFDSMPLKD 134

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
           V  W+ MI+  AQ  L  +A  LF  M +     +    VS   AC      DL   +  
Sbjct: 135 VASWNTMISALAQVGLMGEARRLFSAMPEKNCV-SWSAMVSGYVACG-----DLDAAVEC 188

Query: 368 LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK 427
                  +  V    A++  Y K GR+E +  LF E   R  VTWN MI GYV+ G    
Sbjct: 189 FYA--APMRSVITWTAMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAED 246

Query: 428 AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALID 487
            + +F  MLE  V    ++ +SVL  C++L+AL+ G QVH L  K     D     +L+ 
Sbjct: 247 GLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVS 306

Query: 488 MYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLT 547
           MY+KCG + DA  +F  +   + V WNAMISGY+ HG   + L++FD M++ G +P+ +T
Sbjct: 307 MYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWIT 366

Query: 548 FVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGI 607
           FV VL AC++ GL++ G  YF +M  ++GIE   EHY  MV LLGRAG L +A  LI+ +
Sbjct: 367 FVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSM 426

Query: 608 PFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA 667
           PF+P   I+  LLGAC IH N+ +   +A+++L+ +P     +V L+N+YA    W+  A
Sbjct: 427 PFKPHPAIYGTLLGACRIHKNLNLAEFAAKNLLELDPTIATGYVQLANVYAAQNRWDHVA 486

Query: 668 S-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIP 716
           S           K PG SWIE   +VH FR+ D  H ++  I   L+ L  K + AGY+P
Sbjct: 487 SIRRSMKDNNVVKIPGYSWIEINSVVHGFRSSDRLHPELASIHEKLKDLEKKMKLAGYVP 546

Query: 717 DLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIIS 776
           DL  VL DV E+ KE+ L  HSEKLA+AF L K+P   PIR+ KNLR+C DCH+A K IS
Sbjct: 547 DLEFVLHDVGEELKEQLLLWHSEKLAIAFGLLKVPLGVPIRVFKNLRVCGDCHSATKYIS 606

Query: 777 KIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            I  REII+RD  RFHHF+DG CSC D+W
Sbjct: 607 TIEGREIIVRDTTRFHHFKDGFCSCRDYW 635



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 143/321 (44%), Gaps = 24/321 (7%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D+ + N +++   ++  + +A +LF  MPE+N +S+   + GY        AV  F    
Sbjct: 134 DVASWNTMISALAQVGLMGEARRLFSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAP 193

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
                 +   +TA +   +  G  EL   +F             + T +     + G VE
Sbjct: 194 MR----SVITWTAMITGYMKFGRVELAERLF---------QEMSMRTLVTWNAMIAGYVE 240

Query: 210 FARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCAL 269
             R           E+ L  F  M   G KPN  +   VL  C  L  +++ K  H    
Sbjct: 241 NGRA----------EDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVC 290

Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVE 329
           K     D     +L+ +Y+K G++ +A  +F ++P+KDV+ W+ MI+ YAQ      A+ 
Sbjct: 291 KCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALR 350

Query: 330 LFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR-VGLLSDVFVSNALMDVY 388
           LF  M++  + P+  TFV+VL AC     +DLG Q  + + R  G+ +       ++D+ 
Sbjct: 351 LFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLL 410

Query: 389 AKCGRMENSVELFAESPKRNH 409
            + G++  +V+L    P + H
Sbjct: 411 GRAGKLSEAVDLIKSMPFKPH 431



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 58/259 (22%), Positives = 100/259 (38%), Gaps = 26/259 (10%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N+ S  + L  C     LQ    +H  V K     D  A   L+++Y K   L DA +LF
Sbjct: 262 NALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELF 321

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
            ++P ++ + +   I GY       +A+ LF  + +EG + +   F A L      G  +
Sbjct: 322 IQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVD 381

Query: 175 LCPCVFACVYK-LGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQM 233
           L    F  + +  G ++       ++D     G +                EA++    M
Sbjct: 382 LGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKL---------------SEAVDLIKSM 426

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA---VALLDLYTKS 290
               FKP+   +  +L AC     + +A+     A K   E+D  +A   V L ++Y   
Sbjct: 427 ---PFKPHPAIYGTLLGACRIHKNLNLAE----FAAKNLLELDPTIATGYVQLANVYAAQ 479

Query: 291 GEISNARRIFEEMPKKDVI 309
               +   I   M   +V+
Sbjct: 480 NRWDHVASIRRSMKDNNVV 498


>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 630

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 215/563 (38%), Positives = 326/563 (57%), Gaps = 48/563 (8%)

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y   G+I ++  +F +    D+  ++  I   +   L   A  L+ ++  + + PN+FTF
Sbjct: 72  YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSQINPNEFTF 131

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
            S+L++C+T  G      IH+ V++ GL  D +V+  L+D+YAK G + ++ ++F   P+
Sbjct: 132 SSILKSCSTKSG----KLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVVSAQKVFDRMPE 187

Query: 407 R-------------------------------NHVTWNTMIVGYVQLGEVGKAMIMFSKM 435
           R                               + V+WN MI GY Q G    A+++F K+
Sbjct: 188 RSLVSSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQKL 247

Query: 436 LEEQVPAT-EVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGS 494
           L +  P   E+T  + L AC+ + ALE G  +H     +   ++V V  ALIDMY+KCGS
Sbjct: 248 LADGKPKPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCGS 307

Query: 495 ITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ-RGWRPNNLTFVGVLS 553
           + +A LVF+     + V+WNAMI+GY+MHG S + L++FD MQ   G +P ++TF+G L 
Sbjct: 308 LEEAVLVFNDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPTDITFIGTLQ 367

Query: 554 ACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSV 613
           AC++ GL+ +G   F+SM   YGI+P IEHY  +VSLLGRAG L +A ++I+ +  +   
Sbjct: 368 ACAHAGLVNEGIQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYEIIKNMNMEADS 427

Query: 614 MIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS----- 668
           ++W ++LG+C +H    +G+  A++++     +   +VLLSNIYA+   +E  A      
Sbjct: 428 VLWSSVLGSCKLHGEFMLGKEIAEYLIGQNISNSGIYVLLSNIYALVGDYEGVAKVRNLM 487

Query: 669 ------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVL 722
                 KEPG+S IE    VH FRAGD  H     I  ML  ++ + +  GY+P+ + VL
Sbjct: 488 KEKGIVKEPGISTIEIDNKVHEFRAGDREHLKSKEIYTMLRKMSERIKSHGYVPNTNTVL 547

Query: 723 RDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQRE 782
            D+ E EKER L VHSE+LA+A+ L    P SP++I KNLR+C DCHT  K+ISKI  R+
Sbjct: 548 HDLEETEKERSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRK 607

Query: 783 IIIRDVHRFHHFQDGCCSCGDFW 805
           I++RD +RFHHF DG CSC DFW
Sbjct: 608 IVMRDRNRFHHFSDGSCSCDDFW 630



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 177/372 (47%), Gaps = 56/372 (15%)

Query: 189 DSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFV 248
           D + F+ TA I+  S+               N   ++A   + Q+ +    PN FTF+ +
Sbjct: 90  DPDLFLFTAAINTASI---------------NGLKDQAFLLYVQLLSSQINPNEFTFSSI 134

Query: 249 LKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK-- 306
           LK+C    + +  K  H   LK    +D YVA  L+D+Y K G++ +A+++F+ MP++  
Sbjct: 135 LKSC----STKSGKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVVSAQKVFDRMPERSL 190

Query: 307 -----------------------------DVIPWSFMIARYAQTDLSIDAVELFCRM-RQ 336
                                        D++ W+ MI  Y+Q     DA+ LF ++   
Sbjct: 191 VSSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQKLLAD 250

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
               P++ T V+ L AC+ +  L+ G  IH  V    +  +V V  AL+D+Y+KCG +E 
Sbjct: 251 GKPKPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCGSLEE 310

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE-EQVPATEVTYSSVLRACA 455
           +V +F ++P+++ V WN MI GY   G    A+ +F +M     +  T++T+   L+ACA
Sbjct: 311 AVLVFNDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPTDITFIGTLQACA 370

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDARLVFDMMN-DWNEVS 512
               +  G+Q+   ++   Y +   + +   L+ +  + G +  A  +   MN + + V 
Sbjct: 371 HAGLVNEGIQIF-ESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYEIIKNMNMEADSVL 429

Query: 513 WNAMISGYSMHG 524
           W++++    +HG
Sbjct: 430 WSSVLGSCKLHG 441



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 146/321 (45%), Gaps = 44/321 (13%)

Query: 364 QIHSLVVRVGLLSDV---FVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYV 420
           QIH+ ++R  LL       ++  L   YA  G++ +S+ LF ++   +   +   I    
Sbjct: 45  QIHAAILRHNLLIHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTAS 104

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV 480
             G   +A +++ ++L  Q+   E T+SS+L++C++    + G  +H   +K    +D  
Sbjct: 105 INGLKDQAFLLYVQLLSSQINPNEFTFSSILKSCST----KSGKLIHTHVLKFGLGLDPY 160

Query: 481 VANALIDMYAKCGSITD-------------------------------ARLVFDMMNDWN 509
           VA  L+D+YAK G +                                 AR +FD M + +
Sbjct: 161 VATGLVDIYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDRMCERD 220

Query: 510 EVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW-RPNNLTFVGVLSACSNGGLLEQGEAYF 568
            VSWN MI GYS HG  ++ L +F  +   G  +P+ +T V  LSACS  G LE G  + 
Sbjct: 221 IVSWNVMIDGYSQHGFPSDALMLFQKLLADGKPKPDEITVVAALSACSQIGALETGR-WI 279

Query: 569 KSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
              V +  I   ++  T+++ +  + G L++A  +    P +  ++ W A++    +H  
Sbjct: 280 HVFVNSSRIRLNVKVCTALIDMYSKCGSLEEAVLVFNDTP-RKDIVAWNAMITGYAMHGY 338

Query: 629 VEIG-RL--SAQHILDFEPED 646
            +   RL    Q I   +P D
Sbjct: 339 SQDALRLFDEMQGITGLQPTD 359



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 141/348 (40%), Gaps = 69/348 (19%)

Query: 23  AWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQV 82
           A + GL  QA L   Q  +S   P        N  ++++ L+SC      ++   IH  V
Sbjct: 103 ASINGLKDQAFLLYVQLLSSQINP--------NEFTFSSILKSC----STKSGKLIHTHV 150

Query: 83  LKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAV 142
           LK G  LD +    L+++Y K   +  A K+FD MPER+ +S    I  Y        A 
Sbjct: 151 LKFGLGLDPYVATGLVDIYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAAR 210

Query: 143 GLFSTLHR----------EGHELNPF---AFTAFLKVLVSMG--------WAELCPCVFA 181
            LF  +            +G+  + F   A   F K+L             A L  C   
Sbjct: 211 ALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQKLLADGKPKPDEITVVAALSACSQI 270

Query: 182 CVYKLGHDSNAFVG-----------TALIDAFSVCGCVEFARKVFDGL------------ 218
              + G   + FV            TALID +S CG +E A  VF+              
Sbjct: 271 GALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMI 330

Query: 219 ----FNDCFEEALNFFSQMRAV-GFKPNNFTFAFVLKAC--LGL--DTIRVAKSAHGCAL 269
                +   ++AL  F +M+ + G +P + TF   L+AC   GL  + I++ +S  G   
Sbjct: 331 TGYAMHGYSQDALRLFDEMQGITGLQPTDITFIGTLQACAHAGLVNEGIQIFESM-GQEY 389

Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
               +++ Y    L+ L  ++G++  A  I + M  + D + WS ++ 
Sbjct: 390 GIKPKIEHY--GCLVSLLGRAGQLKRAYEIIKNMNMEADSVLWSSVLG 435


>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
 gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 214/562 (38%), Positives = 333/562 (59%), Gaps = 14/562 (2%)

Query: 257 TIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIA 316
           +I   ++ H   +K+      ++   L+  Y + G   +A  +F+E+P KD++ W+ +I+
Sbjct: 53  SISYCRALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDALELFDELPDKDLVSWNSLIS 112

Query: 317 RYAQ-TDLSIDAVELFCRMR-QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL 374
            +++  DL I  + L  RMR +  + PN+ T + V+ ACA +  LD+G  IH + V+ G+
Sbjct: 113 GFSRRADLGI-CLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGM 171

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
           L +V V N+L+++Y KCG +E +  LF     ++ V+WN+M+  +V +G   K +  F  
Sbjct: 172 LLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIM 231

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGS 494
           M    + + + T  S+L AC +L   +    VH   +    D ++ +A AL+D+YAK G+
Sbjct: 232 MRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIATALLDLYAKLGT 291

Query: 495 ITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSA 554
           ++D+  VF  M + + V+W AM+S Y+MHG   E ++ F+LM + G  P+++TF  +LSA
Sbjct: 292 LSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVPDHVTFTHLLSA 351

Query: 555 CSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVM 614
           CS+ GL+E+G+ YFK M   YG+E  +EHY+ MV LLGR+GHL+ A KLI+ +P +P+  
Sbjct: 352 CSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGRSGHLNDAYKLIKSMPMEPNSG 411

Query: 615 IWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS------ 668
           +W AL+GAC +  N+E+G+  A+ +   +P D   ++ LSN+Y+ A  W  A+       
Sbjct: 412 VWGALIGACRVRGNIELGKEVAERLFSLDPSDSRNYITLSNMYSAAGQWRDASKVRALMK 471

Query: 669 -----KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLR 723
                + PG S+IE+   +H F  GD SH D   I   LE L  K+R+ G+      VL 
Sbjct: 472 ERVLIRNPGCSYIEHGNKIHCFVMGDQSHPDTEQIYNKLEELVRKNREVGFASKTEYVLH 531

Query: 724 DVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREI 783
           DV E+ KE  +  HSEKLA+AF L       P+ I KN+RIC DCH   K+IS I +R I
Sbjct: 532 DVDEEVKEDLINKHSEKLAIAFGLLVTNAGMPLIITKNIRICGDCHGFAKLISLIEKRTI 591

Query: 784 IIRDVHRFHHFQDGCCSCGDFW 805
           IIRD  RFHHF +G CSCGD+W
Sbjct: 592 IIRDTKRFHHFTNGLCSCGDYW 613



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 95/354 (26%), Positives = 174/354 (49%), Gaps = 19/354 (5%)

Query: 190 SNAFVGTALIDAFSVCGCVEFARKVFDGLFND---CFEEALNFFSQ-------------M 233
           ++ F+G  L+ ++   GC + A ++FD L +     +   ++ FS+             M
Sbjct: 71  NHGFIGDQLVSSYVELGCTKDALELFDELPDKDLVSWNSLISGFSRRADLGICLGLLFRM 130

Query: 234 R-AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           R  +G KPN  T   V+ AC G+  + V K  HG A+K+   +++ V  +L++LY K G 
Sbjct: 131 RFEMGLKPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGC 190

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           +  A  +FE M  + ++ W+ M+A +    L+   +  F  MR+A +  +Q T VS+L A
Sbjct: 191 LEAACCLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLA 250

Query: 353 CATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTW 412
           C  +    L   +H  ++  GL  ++ ++ AL+D+YAK G + +S ++F      + V W
Sbjct: 251 CENLGVRKLAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCKVFGGMINPDAVAW 310

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
             M+  Y   G   +A+  F  M+ E V    VT++ +L AC+    +E G     +  +
Sbjct: 311 TAMLSSYAMHGRGREAIEHFELMVREGVVPDHVTFTHLLSACSHSGLVEEGKNYFKIMYE 370

Query: 473 -ANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHG 524
               ++ V   + ++D+  + G + DA +L+  M  + N   W A+I    + G
Sbjct: 371 FYGVELRVEHYSCMVDLLGRSGHLNDAYKLIKSMPMEPNSGVWGALIGACRVRG 424



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 103/417 (24%), Positives = 193/417 (46%), Gaps = 26/417 (6%)

Query: 34  LSTQQCSNSTTTPITFSVSEF-NSHSYATSLQSCIQN-DDLQTAMTIHCQVLKKGNCLDL 91
           +S+ +  NS  + ++ +   F N  S  ++L + I     +     +HC+V+K  N    
Sbjct: 14  ISSIRLYNSFASQLSPTFHAFSNVDSLVSALITAISTCSSISYCRALHCRVIKSVNYNHG 73

Query: 92  FATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHRE 151
           F  + L++ YV+L    DA +LFDE+P+++ +S+ + I G++  +     +GL   +  E
Sbjct: 74  FIGDQLVSSYVELGCTKDALELFDELPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFE 133

Query: 152 -GHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEF 210
            G + N       +     +G  ++  C+     K G      V  +LI+ +  CGC+E 
Sbjct: 134 MGLKPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEA 193

Query: 211 ARKVFDGLFNDCF----------------EEALNFFSQMRAVGFKPNNFTFAFVLKACLG 254
           A  +F+G+                     E+ + +F  MR  G   +  T   +L AC  
Sbjct: 194 ACCLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACEN 253

Query: 255 LDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFM 314
           L   ++A++ HG  L    + +L +A ALLDLY K G +S++ ++F  M   D + W+ M
Sbjct: 254 LGVRKLAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAM 313

Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV-G 373
           ++ YA      +A+E F  M +  V P+  TF  +L AC+    ++ G     ++    G
Sbjct: 314 LSSYAMHGRGREAIEHFELMVREGVVPDHVTFTHLLSACSHSGLVEEGKNYFKIMYEFYG 373

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMI-----VGYVQLGE 424
           +   V   + ++D+  + G + ++ +L    P + N   W  +I      G ++LG+
Sbjct: 374 VELRVEHYSCMVDLLGRSGHLNDAYKLIKSMPMEPNSGVWGALIGACRVRGNIELGK 430



 Score = 45.8 bits (107), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 44/192 (22%), Positives = 76/192 (39%), Gaps = 33/192 (17%)

Query: 73  QTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGY 132
           + A  +H  +L  G   +L     LL++Y KL  L D+ K+F  M   + +++   +  Y
Sbjct: 258 KLAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSY 317

Query: 133 TVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKL------ 186
            +  +  EA+  F  + REG   +   FT  L      G  E     F  +Y+       
Sbjct: 318 AMHGRGREAIEHFELMVREGVVPDHVTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELR 377

Query: 187 --------------GHDSNAF-------------VGTALIDAFSVCGCVEFARKVFDGLF 219
                         GH ++A+             V  ALI A  V G +E  ++V + LF
Sbjct: 378 VEHYSCMVDLLGRSGHLNDAYKLIKSMPMEPNSGVWGALIGACRVRGNIELGKEVAERLF 437

Query: 220 NDCFEEALNFFS 231
           +    ++ N+ +
Sbjct: 438 SLDPSDSRNYIT 449


>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 640

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 229/618 (37%), Positives = 335/618 (54%), Gaps = 77/618 (12%)

Query: 265 HGCALKTCYEMDLYVAVALLDLY---TKSGEISNARRIFEEMPKKDVIPWSFMIARYAQT 321
           H   +KT  + + +V   LL      + + ++  AR +F+E+P  D   W+ MI  Y  +
Sbjct: 23  HALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFIWNTMIRAYLNS 82

Query: 322 DLSIDAVELFCRMRQAFVAP-NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFV 380
               +++ LF +MR     P + ++   V+QAC  ++    G ++H+ V+++GL SD+FV
Sbjct: 83  QNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSDLFV 142

Query: 381 SNALMDVYAKCGRMENSV-------------------------------ELFAESPKRNH 409
             AL+++YAK G +E +                                +LF   P+R+ 
Sbjct: 143 ETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPERDL 202

Query: 410 VTWNTMIVGYVQLGEVGKAMIMFSKMLEE------------------------------- 438
           V+WNTMI G+  LG+VG A  +F +  E                                
Sbjct: 203 VSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLA 262

Query: 439 QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDA 498
            V   +VT  SVL AC  + AL  G  +H    +   ++D+ +  +L+DMYAKCG I ++
Sbjct: 263 NVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNS 322

Query: 499 RLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNG 558
             VF+ MN+ +  +W+AMI G + HG     L  F  M     +PN++TF+GVLSACS+ 
Sbjct: 323 LRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHI 382

Query: 559 GLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRA 618
           GL+++G  YF SM   Y + P IEHY  +V +LGRAG L +A +LI+ +PF P  ++WRA
Sbjct: 383 GLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRA 442

Query: 619 LLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS---------- 668
           LLGAC I+ NVEI   +  ++L+ EP  +  +VLLSNIY+ A+ W+K  +          
Sbjct: 443 LLGACRIYKNVEIAEEATVNLLELEPHVDGNYVLLSNIYSQAKEWDKVVNVRRMMKNINI 502

Query: 669 -KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVRE 727
            K PG S IE    VH F AGD SH +   I  ML  +  + +  GY P  ++VL+D  E
Sbjct: 503 QKVPGSSSIEVDNAVHEFVAGDQSHPESKKILRMLSEITARLKANGYAPLTASVLQDFDE 562

Query: 728 DEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRD 787
            EKE  L  HSEKLA+AF L    P S IRI+KNLR+C DCH AIK+IS+  +R II+RD
Sbjct: 563 KEKENALAHHSEKLAIAFGLLSTAPGSTIRIVKNLRVCDDCHIAIKLISRTYKRRIIVRD 622

Query: 788 VHRFHHFQDGCCSCGDFW 805
            +RFHHF +G CSC D+W
Sbjct: 623 RNRFHHFVNGSCSCKDYW 640



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 125/470 (26%), Positives = 219/470 (46%), Gaps = 36/470 (7%)

Query: 60  ATSLQSCIQN-DDLQTAMTIHCQVLK---KGNCLDLFATNVLLNVYVKLNRLPDATKLFD 115
              + S +QN   L   + IH  ++K    GN   L      L      N L  A  +FD
Sbjct: 3   GKKVMSLLQNATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFD 62

Query: 116 EMPERNTISFVTTIQGYTVSSQFVEAVGLFSTL-HREGHELNPFAFTAFLKVLVSMGWAE 174
           E+P  +T  + T I+ Y  S    E++ LF  + H+E   ++ ++ +  ++    +    
Sbjct: 63  EIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPG 122

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMR 234
               +   V K+G  S+ FV TALI+ ++  G +E AR + D               +M 
Sbjct: 123 NGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILD---------------EMA 167

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKS--AHGCALKTCYEMDLYVAVALLDLYTKSGE 292
                P N   A         + +RV +   AH        E DL     ++  +   G+
Sbjct: 168 HPDLVPYNVLLA---------EYVRVGEINLAHDL-FDRMPERDLVSWNTMIHGHASLGD 217

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           +  A+++F+   ++D+I WS MIA YA+   S +A+ LF  M+ A V P++ T VSVL A
Sbjct: 218 VGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSA 277

Query: 353 CATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTW 412
           C  +  L +G  IH  + R  +  D+ +  +L+D+YAKCG ++NS+ +F     R+   W
Sbjct: 278 CGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAW 337

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
           + MI+G    G    A+  FSKM+ E +   +VT+  VL AC+ +  ++ G   +  ++ 
Sbjct: 338 SAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGW-TYFTSMS 396

Query: 473 ANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISG 519
             YD+   + +   ++D+  + G + +A  L+  M    + + W A++  
Sbjct: 397 KVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGA 446



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 85/378 (22%), Positives = 149/378 (39%), Gaps = 90/378 (23%)

Query: 21  INAWLRGLSAQAALSTQ-QCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIH 79
           I A+L   + Q ++S   Q  +    PI       +S+S +  +Q+C +  D      +H
Sbjct: 76  IRAYLNSQNPQESMSLFFQMRHQECIPI-------DSYSLSLVIQACGRLKDPGNGQKLH 128

Query: 80  CQVLKKGNCLDLFAT-------------------------------NVLLNVYVKLNRLP 108
            QVLK G   DLF                                 NVLL  YV++  + 
Sbjct: 129 TQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEIN 188

Query: 109 DATKLFDEMPERNTISFVTTIQG-------------------------------YTVSSQ 137
            A  LFD MPER+ +S+ T I G                               Y  + Q
Sbjct: 189 LAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQ 248

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
             EA+ LF  +       +     + L     +G   +   +  C+ +   + +  +GT+
Sbjct: 249 SNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTS 308

Query: 198 LIDAFSVCGCVEFARKVFDGLFN-DCF---------------EEALNFFSQMRAVGFKPN 241
           L+D ++ CG ++ + +VF+G+ N D F               E AL+ FS+M +   KPN
Sbjct: 309 LVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPN 368

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA--VALLDLYTKSGEISNARRI 299
           + TF  VL AC  +  +    + +  ++   Y++   +     ++D+  ++G +  A  +
Sbjct: 369 DVTFIGVLSACSHIGLVDEGWT-YFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMEL 427

Query: 300 FEEMP-KKDVIPWSFMIA 316
            + MP   D I W  ++ 
Sbjct: 428 IKSMPFAPDAIVWRALLG 445



 Score = 42.7 bits (99), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 14/190 (7%)

Query: 464 MQVHCLTVKANYDMDVVVANALIDMYAKCGSITD---ARLVFDMMNDWNEVSWNAMISGY 520
           +Q+H L +K + D +  V   L+     C S  D   AR VFD +   +   WN MI  Y
Sbjct: 20  IQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFIWNTMIRAY 79

Query: 521 SMHGLSAEVLKVFDLMQQRGWRP-NNLTFVGVLSACSNGGLLEQGEAY-FKSMVANYGIE 578
                  E + +F  M+ +   P ++ +   V+ AC  G L + G      + V   G+ 
Sbjct: 80  LNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQAC--GRLKDPGNGQKLHTQVLKIGLG 137

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
             +   T+++ +  + G ++ A  +++ +   P ++ +  LL        V +G ++  H
Sbjct: 138 SDLFVETALIEMYAKFGDIEIARNILDEMA-HPDLVPYNVLLAEY-----VRVGEINLAH 191

Query: 639 -ILDFEPEDE 647
            + D  PE +
Sbjct: 192 DLFDRMPERD 201


>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
 gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
          Length = 609

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 227/606 (37%), Positives = 336/606 (55%), Gaps = 44/606 (7%)

Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
           ++   LK C        AK  H   +K+       +   LLD Y K   + +A  +F+EM
Sbjct: 4   SYLHRLKLCTKHQAPLNAKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEM 63

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQACATMEGLDLG 362
           P++D + W+ ++  Y Q  L    + +F  M     + P+ F + ++L+ACA++  L LG
Sbjct: 64  PQRDHVSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLG 123

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGR----------------------------- 393
            Q+H+  V    + D  V ++L+D+YAKCG                              
Sbjct: 124 KQVHARFVLSPFVDDDVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARS 183

Query: 394 --MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATE-VTYSSV 450
              + ++ELF  +P RN  +W  +I G VQ G       MF +M  E V   + +  SSV
Sbjct: 184 GLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSV 243

Query: 451 LRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE 510
           + ACA+LA L  G Q+H L + + Y+  + ++NAL+DMYAKC  I  AR VF+ M   + 
Sbjct: 244 VGACANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLHRDV 303

Query: 511 VSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKS 570
           VSW ++I G + HG + E L ++D M     +PN +TFVG++ ACS+ GL+ +G   FK+
Sbjct: 304 VSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFKA 363

Query: 571 MVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
           M+ +Y I P ++ +T  + LL R+GHL++A  LI+ +P +P    W ALL AC  H N E
Sbjct: 364 MIEDYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHGNTE 423

Query: 631 IGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQ 679
           +G   A  +L     + +T+VLLSN+YA A  WE+ +            ++PG S I+  
Sbjct: 424 MGVRIADRLLSLNMHEPSTYVLLSNVYAGAGKWEQMSRVRKLMTDMEVKRKPGYSSIDLG 483

Query: 680 GMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSE 739
                F AG+T H   + I G+L+ L+ + RK GYIPD S VL D+ E EKER L+ HSE
Sbjct: 484 KESQVFHAGETCHPMKDEIFGLLKELDAEMRKRGYIPDTSYVLHDMEEQEKERELFWHSE 543

Query: 740 KLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCC 799
           + A+A+ L K  P + IRI+KNLRIC DCHT +K+ S IV +EII+RD  R+HHF+DG C
Sbjct: 544 RWAVAYGLLKAVPGTVIRIVKNLRICGDCHTFLKLTSSIVHKEIIVRDATRYHHFKDGRC 603

Query: 800 SCGDFW 805
           SC DFW
Sbjct: 604 SCNDFW 609



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 112/454 (24%), Positives = 194/454 (42%), Gaps = 69/454 (15%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKG--NCLDLFATNVLLNVYVKLNRLPDATKLFD 115
           SY   L+ C ++     A  IH Q++K G   C  L   N LL+ Y K N L DA  LFD
Sbjct: 4   SYLHRLKLCTKHQAPLNAKKIHAQIVKSGLNQCQPL--PNTLLDAYGKCNLLQDAHYLFD 61

Query: 116 EMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNP--FAFTAFLKVLVSMGWA 173
           EMP+R+ +S+ + +  Y  +    + + +F  +      L P  F +   LK   S+   
Sbjct: 62  EMPQRDHVSWASILTAYNQAKLPNKTLSIFHYMFTTD-RLQPDHFVYATLLKACASLCSL 120

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD----------------- 216
            L   V A         +  V ++L+D ++ CG    AR VFD                 
Sbjct: 121 RLGKQVHARFVLSPFVDDDVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGY 180

Query: 217 ---GLFNDCFE---------------------------EALNFFSQMRAVGFK-PNNFTF 245
              GL ++  E                           +    F +MR  G    +    
Sbjct: 181 ARSGLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVL 240

Query: 246 AFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPK 305
           + V+ AC  L  + + K  HG  + + YE  L+++ AL+D+Y K  +I  AR +F  M  
Sbjct: 241 SSVVGACANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLH 300

Query: 306 KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
           +DV+ W+ +I   AQ   + +A++L+ +M  A + PN+ TFV ++ AC+    +  G ++
Sbjct: 301 RDVVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKL 360

Query: 366 HSLVVRVGLLSDVFVSNAL------MDVYAKCGRMENSVELFAESP-KRNHVTWNTMIVG 418
                   ++ D  +S +L      +D+ ++ G +  + +L    P K +  TW  ++  
Sbjct: 361 FK-----AMIEDYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSA 415

Query: 419 YVQLGEVGKAMIMFSKMLEEQV--PATEVTYSSV 450
               G     + +  ++L   +  P+T V  S+V
Sbjct: 416 CKHHGNTEMGVRIADRLLSLNMHEPSTYVLLSNV 449



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 92/473 (19%), Positives = 184/473 (38%), Gaps = 85/473 (17%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQV---------LKKGNCLDLFAT--------------- 94
           YAT L++C     L+    +H +          + K + +D++A                
Sbjct: 107 YATLLKACASLCSLRLGKQVHARFVLSPFVDDDVVKSSLVDMYAKCGLPSIARSVFDSIL 166

Query: 95  -------NVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFST 147
                    +L+ Y +     +A +LF   P RN  S+   I G   S   ++   +F  
Sbjct: 167 VKTSVSWTAMLSGYARSGLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIE 226

Query: 148 LHREGHEL-NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCG 206
           + REG ++ +P   ++ +    ++    L   +   V   G++S  F+  AL+D ++ C 
Sbjct: 227 MRREGVDIVDPLVLSSVVGACANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCS 286

Query: 207 CVEFARKVFDGLFNDCF----------------EEALNFFSQMRAVGFKPNNFTFAFVLK 250
            +  AR VF+ + +                   +EAL+ + QM     KPN  TF  ++ 
Sbjct: 287 DILAARNVFNRMLHRDVVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLIY 346

Query: 251 ACLGLDTIRVAKSAHGCALKTCYEM--DLYVAVALLDLYTKSGEISNARRIFEEMPKKDV 308
           AC     +   +      ++  Y +   L +    LDL ++SG ++ A  + + MP K  
Sbjct: 347 ACSHAGLVSKGRKLFKAMIED-YRISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPD 405

Query: 309 IP-WSFMIA---RYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA---------- 354
            P W+ +++    +  T++ +   +    +      P+ +  +S + A A          
Sbjct: 406 EPTWAALLSACKHHGNTEMGVRIADRLLSLNMH--EPSTYVLLSNVYAGAGKWEQMSRVR 463

Query: 355 -TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV-----ELFAESPKRN 408
             M  +++  +     + +G  S VF +         C  M++ +     EL AE  KR 
Sbjct: 464 KLMTDMEVKRKPGYSSIDLGKESQVFHAG------ETCHPMKDEIFGLLKELDAEMRKRG 517

Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKM------LEEQVPATEVTYSSVLRACA 455
           ++   + ++  ++  E  + +   S+       L + VP T +     LR C 
Sbjct: 518 YIPDTSYVLHDMEEQEKERELFWHSERWAVAYGLLKAVPGTVIRIVKNLRICG 570


>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Glycine max]
          Length = 882

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 242/742 (32%), Positives = 383/742 (51%), Gaps = 30/742 (4%)

Query: 89  LDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTL 148
           L L   N LL+++V+   L DA  +F  M +RN  S+   + GY  +  F EA+ L+  +
Sbjct: 139 LSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRM 198

Query: 149 HREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCV 208
              G + + + F   L+    M        +   V + G +S+  V  ALI  +  CG V
Sbjct: 199 LWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDV 258

Query: 209 EFARKVFDGLFN-----------DCFE-----EALNFFSQMRAVGFKPNNFTFAFVLKAC 252
             AR VFD + N             FE     E L  F  M      P+  T   V+ AC
Sbjct: 259 NTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITAC 318

Query: 253 LGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWS 312
             L   R+ +  HG  L+T +  D  +  +L+ +Y+  G I  A  +F     +D++ W+
Sbjct: 319 ELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWT 378

Query: 313 FMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV 372
            MI+ Y    +   A+E +  M    + P++ T   VL AC+ +  LD+G  +H +  + 
Sbjct: 379 AMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQK 438

Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMF 432
           GL+S   V+N+L+D+YAKC  ++ ++E+F  + ++N V+W ++I+G        +A+  F
Sbjct: 439 GLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFF 498

Query: 433 SKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKC 492
            +M+    P + VT   VL ACA + AL  G ++H   ++     D  + NA++DMY +C
Sbjct: 499 REMIRRLKPNS-VTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRC 557

Query: 493 GSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL 552
           G +  A   F  + D    SWN +++GY+  G  A   ++F  M +    PN +TF+ +L
Sbjct: 558 GRMEYAWKQFFSV-DHEVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISIL 616

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
            ACS  G++ +G  YF SM   Y I P ++HY  +V LLGR+G L++A + I+ +P +P 
Sbjct: 617 CACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPD 676

Query: 613 VMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS---- 668
             +W ALL +C IH++VE+G L+A++I   +      ++LLSN+YA    W+K A     
Sbjct: 677 PAVWGALLNSCRIHHHVELGELAAENIFQDDTTSVGYYILLSNLYADNGKWDKVAEVRKM 736

Query: 669 -------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAV 721
                   +PG SW+E +G VH F + D  H  +  I  +LE    K ++AG     S+ 
Sbjct: 737 MRQNGLIVDPGCSWVEVKGTVHAFLSSDNFHPQIKEINALLERFYKKMKEAGVEGPESSH 796

Query: 722 LRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQR 781
           + D+ E  K      HSE+LA+ F L    P  PI + KNL +C  CH  +K IS+ V+R
Sbjct: 797 M-DIMEASKADIFCGHSERLAIVFGLINSGPGMPIWVTKNLYMCQSCHNIVKFISREVRR 855

Query: 782 EIIIRDVHRFHHFQDGCCSCGD 803
           EI +RD  +FHHF+ G CSC D
Sbjct: 856 EISVRDAEQFHHFKGGICSCTD 877



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 202/409 (49%), Gaps = 10/409 (2%)

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
            + A+++   M  +     +  +  +++ C      +     +     +   + L +  A
Sbjct: 87  LDRAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLGNA 146

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           LL ++ + G + +A  +F  M K+++  W+ ++  YA+  L  +A++L+ RM    V P+
Sbjct: 147 LLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPD 206

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
            +TF  VL+ C  M  L  G +IH  V+R G  SDV V NAL+ +Y KCG +  +  +F 
Sbjct: 207 VYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFD 266

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
           + P R+ ++WN MI GY + G   + + +F  M++  V    +T +SV+ AC  L     
Sbjct: 267 KMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRL 326

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G Q+H   ++  +  D  + N+LI MY+  G I +A  VF      + VSW AMISGY  
Sbjct: 327 GRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYEN 386

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG----EAYFKSMVANYGIE 578
             +  + L+ + +M+  G  P+ +T   VLSACS    L+ G    E   +  + +Y I 
Sbjct: 387 CLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIV 446

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
                  S++ +  +   +DKA ++      + +++ W +++    I+N
Sbjct: 447 A-----NSLIDMYAKCKCIDKALEIFHST-LEKNIVSWTSIILGLRINN 489



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 2/210 (0%)

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
           N+ I     LG + +AM     M E ++P  +  Y +++R C    A + G +V+     
Sbjct: 75  NSHIYQLCLLGNLDRAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSYVSI 134

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
           +   + + + NAL+ M+ + G++ DA  VF  M   N  SWN ++ GY+  GL  E L +
Sbjct: 135 SMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDL 194

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
           +  M   G +P+  TF  VL  C     L +G       V  YG E  ++   +++++  
Sbjct: 195 YHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGRE-IHVHVIRYGFESDVDVVNALITMYV 253

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           + G ++ A  + + +P +  +  W A++  
Sbjct: 254 KCGDVNTARLVFDKMPNRDRIS-WNAMISG 282



 Score = 39.7 bits (91), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 1/110 (0%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           NS +    L +C +   L     IH   L+ G   D F  N +L++YV+  R+  A K F
Sbjct: 508 NSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQF 567

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFL 164
             + +    S+   + GY    +   A  LF  +       N   F + L
Sbjct: 568 FSV-DHEVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISIL 616


>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 228/611 (37%), Positives = 337/611 (55%), Gaps = 79/611 (12%)

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
            +D  +A+ L+  Y+  GE S AR IF+   +K+V+ ++ MI  Y   +L ++A+ +F  
Sbjct: 68  RIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQV 127

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALM-------- 385
           M      P+ +TF  VL+AC+ ++ L +G Q+H  +V+VGL +++F+ NAL+        
Sbjct: 128 MLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGC 187

Query: 386 --------------DV---------YAKCGRMENSVELFAE----------------SP- 405
                         DV         YA+ G+ ++++E+  E                SP 
Sbjct: 188 LREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPV 247

Query: 406 --------------------KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEV 445
                               K+N ++WN MI  YV      +A+ +F +M E  +    V
Sbjct: 248 VCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAV 307

Query: 446 TYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMM 505
           T +S+L AC  L+AL  G ++H    K N   ++++ NAL+DMYAKCG + +AR VFD M
Sbjct: 308 TIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKM 367

Query: 506 NDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE 565
              + VSW +M+S Y   G   + + +F  M   G  P+++ FV VLSACS+ GLL+QG 
Sbjct: 368 RLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGR 427

Query: 566 AYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACII 625
            YF+ M   YGI P IEH+  MV L GRAG +++A   I+ +P +P+  +W ALL AC +
Sbjct: 428 HYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRV 487

Query: 626 HNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLS 674
           H+ ++IG ++A  +    P+    +VLLSNIYA A  W+   +           K PG+S
Sbjct: 488 HSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGIS 547

Query: 675 WIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYL 734
            +E  G VH F AGD  H     I G L+ L  K ++ GYIP   + L DV  ++KE +L
Sbjct: 548 NVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTESALHDVEVEDKECHL 607

Query: 735 WVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHF 794
            +HSEKLA+ FA+      +PIRI KNLR+C DCH AIK+ISKIV R II+RD +RFHHF
Sbjct: 608 AIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIVSRNIIVRDCNRFHHF 667

Query: 795 QDGCCSCGDFW 805
            +G CSCGD+W
Sbjct: 668 SNGICSCGDYW 678



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 115/444 (25%), Positives = 212/444 (47%), Gaps = 19/444 (4%)

Query: 97  LLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELN 156
           L+  Y        A  +FD   E+N + F   I+ Y  ++ +VEA+ +F  +       +
Sbjct: 77  LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136

Query: 157 PFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD 216
            + F   LK    +    +   V   + K+G D+N F+G AL+  +  CGC+  ARKV D
Sbjct: 137 HYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLD 196

Query: 217 GLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
            +    + + +++ S +   G+  +   F   L+ C  +D++ +   A   A        
Sbjct: 197 QM---PYRDVVSWNSMV--AGYAQSG-QFDDALEICKEMDSLNLNHDAGTMA-------- 242

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
              +++ +  YT    +     +FE M KK++I W+ MIA Y    +  +AV LF +M +
Sbjct: 243 ---SLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEE 299

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             + P+  T  S+L AC  +  L LG ++H  + +  L  ++ + NAL+D+YAKCG +E 
Sbjct: 300 CGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEE 359

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           + ++F +   R+ V+W +M+  Y + G+   A+ +F+KML+       + + SVL AC+ 
Sbjct: 360 ARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSH 419

Query: 457 LAALEPGMQ-VHCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWN 514
              L+ G      +T +      +     ++D++ + G + +A   +  M  + NE  W 
Sbjct: 420 TGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWG 479

Query: 515 AMISGYSMHGLSAEVLKVFDLMQQ 538
           A++S   +H      L   DL+ Q
Sbjct: 480 ALLSACRVHSKMDIGLVAADLLFQ 503



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 177/365 (48%), Gaps = 21/365 (5%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           + +++   L++C   D+L+  + +H  ++K G   +LF  N L+ +Y K   L +A K+ 
Sbjct: 136 DHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVL 195

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D+MP R+ +S+ + + GY  S QF +A+ +   +  +   LN  A T           A 
Sbjct: 196 DQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEM--DSLNLNHDAGT----------MAS 243

Query: 175 LCPCV-FACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQM 233
           L P V +  +  + +  N F    +     +   V  A  V + + N    EA++ F QM
Sbjct: 244 LSPVVCYTSLENVQYIHNMF--ERMTKKNLISWNVMIAIYVNNSMPN----EAVSLFLQM 297

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
              G KP+  T A +L AC  L  + + +  H    K   + +L +  ALLD+Y K G +
Sbjct: 298 EECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCL 357

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
             AR +F++M  +DV+ W+ M++ Y ++    DAV LF +M  +   P+   FVSVL AC
Sbjct: 358 EEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSAC 417

Query: 354 ATMEGLDLGNQIHSLVV-RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVT 411
           +    LD G     ++  + G++  +     ++D++ + G +E +     + P + N   
Sbjct: 418 SHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERV 477

Query: 412 WNTMI 416
           W  ++
Sbjct: 478 WGALL 482



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 94/176 (53%), Gaps = 1/176 (0%)

Query: 358 GLDLGNQIHS-LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMI 416
           G+   N++HS +V+   L  D  ++  LM  Y+  G    +  +F  S ++N V +N MI
Sbjct: 50  GIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMI 109

Query: 417 VGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD 476
             YV      +A+ +F  ML         T+  VL+AC+ L  L  G+QVH   VK   D
Sbjct: 110 RSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLD 169

Query: 477 MDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
            ++ + NAL+ MY KCG + +AR V D M   + VSWN+M++GY+  G   + L++
Sbjct: 170 TNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEI 225



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 7/175 (4%)

Query: 453 ACASLAALEPGMQ----VHC-LTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND 507
           AC  +    PG++    +H  + +  +  +D  +A  L+  Y+  G  + AR +FD   +
Sbjct: 40  ACEVILDQYPGIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLE 99

Query: 508 WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAY 567
            N V +N MI  Y  + L  E L +F +M    + P++ TF  VL ACS    L  G   
Sbjct: 100 KNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQV 159

Query: 568 FKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
             ++V   G++  +    ++V++ G+ G L +A K+++ +P++  V+ W +++  
Sbjct: 160 HDAIV-KVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYR-DVVSWNSMVAG 212



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 107/260 (41%), Gaps = 37/260 (14%)

Query: 60  ATSLQSCIQNDDLQTAMTIHCQVLKKGNCL-DLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           A+ L +C     L     +H + ++KGN   +L   N LL++Y K   L +A  +FD+M 
Sbjct: 310 ASLLPACGDLSALFLGRRLH-KYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMR 368

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG------- 171
            R+ +S+ + +  Y  S Q  +AV LF+ +   G   +  AF + L      G       
Sbjct: 369 LRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRH 428

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFS 231
           +  +    +  V ++ H +       ++D F   G V               EEA +F  
Sbjct: 429 YFRMMTEQYGIVPRIEHFA------CMVDLFGRAGEV---------------EEAYSFIK 467

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
           QM     +PN   +  +L AC     + +   A     +   +   Y  V L ++Y K+G
Sbjct: 468 QM---PMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYY-VLLSNIYAKAG 523

Query: 292 ---EISNARRIFEEMPKKDV 308
              ++ N R   +++  K V
Sbjct: 524 MWKDVMNVRYAMKKIGIKKV 543


>gi|357443809|ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481230|gb|AES62433.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 912

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 251/781 (32%), Positives = 407/781 (52%), Gaps = 45/781 (5%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLP-DATKL 113
           N  + +++L+SC    + +  M IHC  +K G  ++ F    L+  Y K      +A KL
Sbjct: 114 NEFTLSSALRSCFALGEFERGMQIHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKL 173

Query: 114 FDEMPER-NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
              + +  + +S+ T +     + ++ EA  ++  +   G   N F F   L  + S   
Sbjct: 174 LSLVKDGGDVVSWTTMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLG 233

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKV------FDGLF------- 219
                 + A +   G + N  + TA++D +S C  +  A KV      +D          
Sbjct: 234 LSYGKLLHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISG 293

Query: 220 ---NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
              N    EA++ F  M   G  PNNFT++ +L A   + ++ + +  H   +    E D
Sbjct: 294 FTQNLQVREAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDD 353

Query: 277 LYVAVALLDLYTKSGEIS-NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
           LY+  AL+D+Y K   I+ NA ++F E+   +V+ W+ +IA +A+  L  D+ +LF  M+
Sbjct: 354 LYIGNALVDMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFAEKRLE-DSFQLFAEMQ 412

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
            A V PN FT  ++L AC+    L     +H  +++  +  D+ V+NAL+D YA  G ++
Sbjct: 413 AAGVRPNSFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMID 472

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
            +  +      R+ +T+  +     Q G  G A+ +   M  + +   E + +S L A A
Sbjct: 473 EAWSVIGTMNLRDSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAA 532

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
            L  +E G Q+HC +VK+ +     V+N+L+ +Y+KCGSI DA   F  +++ +  SWN 
Sbjct: 533 GLGTMETGKQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWNG 592

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           +ISG+S +GL +  L  FD M+  G +P+++T + ++SACS+GGLLE G  YF SM   Y
Sbjct: 593 LISGFSWNGLISHALSTFDDMRLAGVKPDSITLLSLISACSHGGLLELGLEYFHSMQKEY 652

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS 635
            I P ++HY  +V LLGR G L++A  +IE + F+P  +I + LL AC +H NV +G   
Sbjct: 653 HITPKLDHYMCLVDLLGRGGRLEEAMGVIEKMSFKPDSLICKTLLNACNLHGNVALGEDM 712

Query: 636 AQHILDFEPEDEATHVLLSNIYAMAR-----------SWEKAASKEPGLSWIENQGMVHY 684
           A+  L+ +P D A ++LL+N+Y  A              E+   + PG  W+E +  VH+
Sbjct: 713 ARRCLELDPSDPAIYLLLANLYDNAGLSDFGEKTRRLMRERGLRRSPGQCWMEIRSRVHH 772

Query: 685 FRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALA 744
           F AG+  + D   I   LE+L  + R   Y           +E+E + Y   H E+LA+A
Sbjct: 773 FSAGEKINEDE--ITEKLEFLITEFRNRRY---------QYQENEDKFY---HPEQLAVA 818

Query: 745 FALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
           F +   P +SPIRI KN  IC  CHT I + ++++ REII+RD  RFH F+DG CSC D 
Sbjct: 819 FGVLNAPSTSPIRIYKNSLICSHCHTFIMLSTQVIGREIIMRDRKRFHFFKDGQCSCRDI 878

Query: 805 W 805
           +
Sbjct: 879 F 879



 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 171/594 (28%), Positives = 290/594 (48%), Gaps = 24/594 (4%)

Query: 48  TFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRL 107
           TFS+S F        + S   ++ L+  + IH  ++K G   DL+ TN LL++Y K   +
Sbjct: 8   TFSLSRF--QETCLRVLSFCNSNSLKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGV 65

Query: 108 PDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVL 167
             A  LFDEMP R+ +S+ T +  +T +    +A+ LF  +   G   N F  ++ L+  
Sbjct: 66  HRARHLFDEMPNRDVVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSC 125

Query: 168 VSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCV-----EFARKVFDG----- 217
            ++G  E    +     KLG + N FVGT+L++ ++ CGC      +    V DG     
Sbjct: 126 FALGEFERGMQIHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVS 185

Query: 218 --------LFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCAL 269
                   + N  + EA   + +M   G  PN FTF  +L A      +   K  H   +
Sbjct: 186 WTTMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLI 245

Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVE 329
               E++L +  A++D+Y+K   + +A ++    P+ DV  W+ +I+ + Q     +A+ 
Sbjct: 246 MFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAIS 305

Query: 330 LFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYA 389
           +F  M  + + PN FT+ S+L A +++  LDLG Q HS V+ VGL  D+++ NAL+D+Y 
Sbjct: 306 VFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYM 365

Query: 390 KCGRM-ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYS 448
           KC  +  N+V++F E    N + W ++I G+ +   +  +  +F++M    V     T S
Sbjct: 366 KCSHITTNAVKVFREITSPNVMCWTSLIAGFAE-KRLEDSFQLFAEMQAAGVRPNSFTMS 424

Query: 449 SVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDW 508
           ++L AC+   +L P M +H   +K   D+D+ VANAL+D YA  G I +A  V   MN  
Sbjct: 425 AILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTMNLR 484

Query: 509 NEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYF 568
           + +++  + +  +  G     LKV   M   G + +  +    LSA +  G +E G+   
Sbjct: 485 DSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETGKQLH 544

Query: 569 KSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
              V + G + C     S+V L  + G +  A +  + I  +P    W  L+  
Sbjct: 545 CYSVKS-GFQRCHSVSNSLVHLYSKCGSIHDANRAFKDIS-EPDAFSWNGLISG 596


>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
 gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 938

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 263/833 (31%), Positives = 424/833 (50%), Gaps = 76/833 (9%)

Query: 40  SNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLN 99
           + +TT P   + S+  + +  +SL++C   D+L+     H  + K+G   D+     L+ 
Sbjct: 17  TTTTTKPSLLNQSKC-TKATPSSLKNCKTIDELKM---FHRSLTKQGLDNDVSTITKLVA 72

Query: 100 VYVKLN---RLPDATKLFDEMPERNT-ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHEL 155
              +L     L  A ++F+      T   + + I+GY  S    EA+ LF  +   G   
Sbjct: 73  RSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISP 132

Query: 156 N----PFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFA 211
           +    PF  +A  K        +    +   + K+G+  + FV  +L+  ++ CG ++ A
Sbjct: 133 DKYTFPFGLSACAKSRAKGNGIQ----IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSA 188

Query: 212 RKVFDGLFN----------------DCFEEALN-FFSQMRAVGFKPNNFTFAFVLKACLG 254
           RKVFD +                  D  ++A++ FF  +R     PN+ T   V+ AC  
Sbjct: 189 RKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAK 248

Query: 255 LDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFM 314
           L+ +   +  +     +  E++  +  AL+D+Y K   I  A+R+F+E    ++   + M
Sbjct: 249 LEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAM 308

Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL 374
            + Y +  L+ +A+ +F  M  + V P++ + +S + +C+ +  +  G   H  V+R G 
Sbjct: 309 ASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGF 368

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
            S   + NAL+D+Y KC R + +  +F     +  VTWN+++ GYV+ GEV  A   F  
Sbjct: 369 ESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFET 428

Query: 435 MLE--------------------------------EQVPATEVTYSSVLRACASLAALEP 462
           M E                                E V A  VT  S+  AC  L AL+ 
Sbjct: 429 MPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDL 488

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
              ++    K    +DV +   L+DM+++CG    A  +F+ + + +  +W A I   +M
Sbjct: 489 AKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAM 548

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
            G +   +++FD M ++G +P+ + FVG L+ACS+GGL++QG+  F SM+  +G+ P   
Sbjct: 549 AGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDV 608

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDF 642
           HY  MV LLGRAG L++A +LIE +P +P+ +IW +LL AC +  NVE+   +A+ I   
Sbjct: 609 HYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVL 668

Query: 643 EPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTS 691
            PE   ++VLLSN+YA A  W           EK   K PG S I+ +G  H F +GD S
Sbjct: 669 APERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDES 728

Query: 692 HADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMP 751
           H +M  I  ML+ ++ ++   G++PDLS VL DV E EK   L  HSEKLA+A+ L    
Sbjct: 729 HPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSN 788

Query: 752 PSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
             + IRI+KNLR+C DCH+  K  SK+  REII+RD +RFH+ + G CSCGDF
Sbjct: 789 KGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841


>gi|356562443|ref|XP_003549481.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 836

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 252/823 (30%), Positives = 410/823 (49%), Gaps = 144/823 (17%)

Query: 81  QVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPE--RNTISFVTTIQGYTVSSQF 138
           +V ++ N  ++F  N +L+ +    R+ +A  LFDEMP   R+++S+ T I GY  +   
Sbjct: 60  RVFREANHANIFTWNTMLHAFFDSGRMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLP 119

Query: 139 VEAVGLFSTLHREG-HEL---NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFV 194
             ++  F ++ R+  H++   +PF++T  +K    +        + A V KL   +   +
Sbjct: 120 AHSIKTFMSMLRDSNHDIQNCDPFSYTCTMKACGCLASTRFALQLHAHVIKLHLGAQTCI 179

Query: 195 GTALIDAFSVCGCVEFARKVF-----DGLFNDCFE-------------EALNFFSQMRA- 235
             +L+D +  CG +  A  VF       LF  C+              EAL+ F++M   
Sbjct: 180 QNSLVDMYIKCGAITLAETVFLNIESPSLF--CWNSMIYGYSQLYGPYEALHVFTRMPER 237

Query: 236 ------------------------------VGFKPNNFTFAFVLKACLGLDTIRVAKSAH 265
                                         +GFKPN  T+  VL AC  +  ++     H
Sbjct: 238 DHVSWNTLISVFSQYGHGIRCLSTFVEMCNLGFKPNFMTYGSVLSACASISDLKWGAHLH 297

Query: 266 GCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSI 325
              L+  + +D ++   L+D+Y K G ++ ARR+F  + +++ + W+ +I+  AQ  L  
Sbjct: 298 ARILRMEHSLDAFLGSGLIDMYAKCGCLALARRVFNSLGEQNQVSWTCLISGVAQFGLRD 357

Query: 326 DAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALM 385
           DA+ LF +MRQA V  ++FT  ++L  C+       G  +H   ++ G+ S V V NA++
Sbjct: 358 DALALFNQMRQASVVLDEFTLATILGVCSGQNYAATGELLHGYAIKSGMDSFVPVGNAII 417

Query: 386 DVYAKCGRMENS------------------VELFAES-------------PKRNHVTWNT 414
            +YA+CG  E +                  +  F+++             P+RN +TWN+
Sbjct: 418 TMYARCGDTEKASLAFRSMPLRDTISWTAMITAFSQNGDIDRARQCFDMMPERNVITWNS 477

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
           M+  Y+Q G   + M ++  M  + V    VT+++ +RACA LA ++ G QV     K  
Sbjct: 478 MLSTYIQHGFSEEGMKLYVLMRSKAVKPDWVTFATSIRACADLATIKLGTQVVSHVTKFG 537

Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
              DV VAN+++ MY++CG I +AR VFD ++  N +SWNAM++ ++ +GL  + ++ ++
Sbjct: 538 LSSDVSVANSIVTMYSRCGQIKEARKVFDSIHVKNLISWNAMMAAFAQNGLGNKAIETYE 597

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
            M +   +P+++++V VLS                                    LLGRA
Sbjct: 598 DMLRTECKPDHISYVAVLS-----------------------------------DLLGRA 622

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLS 654
           G LD+A  LI+G+PF+P+  +W ALLGAC IH++  +   +A+ +++   ED   +VLL+
Sbjct: 623 GLLDQAKNLIDGMPFKPNATVWGALLGACRIHHDSILAETAAKKLMELNVEDSGGYVLLA 682

Query: 655 NIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLE 703
           NIYA +   E  A            K PG SWIE    VH F   +TSH  +N +   LE
Sbjct: 683 NIYAESGELENVADMRKLMKVKGIRKSPGCSWIEVDNRVHVFTVDETSHPQINEVYVKLE 742

Query: 704 WLNMKSRKAG-YIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNL 762
            +  K    G Y+  +S   R       ++Y   HSEKLA AF L  +PP  PI++ KNL
Sbjct: 743 EMMKKIEDTGRYVSIVSCAHR------SQKY---HSEKLAFAFGLLSLPPWMPIQVTKNL 793

Query: 763 RICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           R+C DCH  IK++S +  RE+I+RD  RFHHF+DG CSC D+W
Sbjct: 794 RVCNDCHLVIKLLSLVTSRELIMRDGFRFHHFKDGFCSCRDYW 836



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 215/451 (47%), Gaps = 56/451 (12%)

Query: 64  QSCIQNDDLQT-----AMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           Q+CIQN  +       A+T+   V        LF  N ++  Y +L    +A  +F  MP
Sbjct: 176 QTCIQNSLVDMYIKCGAITLAETVFLNIESPSLFCWNSMIYGYSQLYGPYEALHVFTRMP 235

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
           ER+ +S+ T I  ++     +  +  F  +   G + N   + + L    S+   +    
Sbjct: 236 ERDHVSWNTLISVFSQYGHGIRCLSTFVEMCNLGFKPNFMTYGSVLSACASISDLKWGAH 295

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND------CF--------- 223
           + A + ++ H  +AF+G+ LID ++ CGC+  AR+VF+ L         C          
Sbjct: 296 LHARILRMEHSLDAFLGSGLIDMYAKCGCLALARRVFNSLGEQNQVSWTCLISGVAQFGL 355

Query: 224 -EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV- 281
            ++AL  F+QMR      + FT A +L  C G +     +  HG A+K+   MD +V V 
Sbjct: 356 RDDALALFNQMRQASVVLDEFTLATILGVCSGQNYAATGELLHGYAIKS--GMDSFVPVG 413

Query: 282 --------------------------------ALLDLYTKSGEISNARRIFEEMPKKDVI 309
                                           A++  ++++G+I  AR+ F+ MP+++VI
Sbjct: 414 NAIITMYARCGDTEKASLAFRSMPLRDTISWTAMITAFSQNGDIDRARQCFDMMPERNVI 473

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
            W+ M++ Y Q   S + ++L+  MR   V P+  TF + ++ACA +  + LG Q+ S V
Sbjct: 474 TWNSMLSTYIQHGFSEEGMKLYVLMRSKAVKPDWVTFATSIRACADLATIKLGTQVVSHV 533

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAM 429
            + GL SDV V+N+++ +Y++CG+++ + ++F     +N ++WN M+  + Q G   KA+
Sbjct: 534 TKFGLSSDVSVANSIVTMYSRCGQIKEARKVFDSIHVKNLISWNAMMAAFAQNGLGNKAI 593

Query: 430 IMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
             +  ML  +     ++Y +VL      A L
Sbjct: 594 ETYEDMLRTECKPDHISYVAVLSDLLGRAGL 624



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/487 (25%), Positives = 219/487 (44%), Gaps = 70/487 (14%)

Query: 200 DAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIR 259
           DAF +CG    ARK+   L            S + A  F  NN    +     +  D  R
Sbjct: 12  DAFKLCGSPPIARKLHAQLI----------LSGLDASLFLLNNLLHMYS-NCGMVDDAFR 60

Query: 260 VAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPK--KDVIPWSFMIAR 317
           V + A+          +++    +L  +  SG +  A  +F+EMP   +D + W+ MI+ 
Sbjct: 61  VFREAN--------HANIFTWNTMLHAFFDSGRMREAENLFDEMPHIVRDSVSWTTMISG 112

Query: 318 YAQTDLSIDAVELFCRM----RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
           Y Q  L   +++ F  M           + F++   ++AC  +       Q+H+ V+++ 
Sbjct: 113 YCQNGLPAHSIKTFMSMLRDSNHDIQNCDPFSYTCTMKACGCLASTRFALQLHAHVIKLH 172

Query: 374 LLSDVFVSNALMDVYAKCGRME-------------------------------NSVELFA 402
           L +   + N+L+D+Y KCG +                                 ++ +F 
Sbjct: 173 LGAQTCIQNSLVDMYIKCGAITLAETVFLNIESPSLFCWNSMIYGYSQLYGPYEALHVFT 232

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
             P+R+HV+WNT+I  + Q G   + +  F +M         +TY SVL ACAS++ L+ 
Sbjct: 233 RMPERDHVSWNTLISVFSQYGHGIRCLSTFVEMCNLGFKPNFMTYGSVLSACASISDLKW 292

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G  +H   ++  + +D  + + LIDMYAKCG +  AR VF+ + + N+VSW  +ISG + 
Sbjct: 293 GAHLHARILRMEHSLDAFLGSGLIDMYAKCGCLALARRVFNSLGEQNQVSWTCLISGVAQ 352

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
            GL  + L +F+ M+Q     +  T   +L  CS       GE     ++  Y I+  ++
Sbjct: 353 FGLRDDALALFNQMRQASVVLDEFTLATILGVCSGQNYAATGE-----LLHGYAIKSGMD 407

Query: 583 HY----TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
            +     +++++  R G  +KA+     +P + ++  W A++ A     N +I R  A+ 
Sbjct: 408 SFVPVGNAIITMYARCGDTEKASLAFRSMPLRDTIS-WTAMITA--FSQNGDIDR--ARQ 462

Query: 639 ILDFEPE 645
             D  PE
Sbjct: 463 CFDMMPE 469



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 155/352 (44%), Gaps = 47/352 (13%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +Y + L +C    DL+    +H ++L+  + LD F  + L+++Y K   L  A ++F
Sbjct: 273 NFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCGCLALARRVF 332

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           + + E+N +S+   I G        +A+ LF+ + +    L+ F     L V     +A 
Sbjct: 333 NSLGEQNQVSWTCLISGVAQFGLRDDALALFNQMRQASVVLDEFTLATILGVCSGQNYAA 392

Query: 175 LCPCVFACVYKLGHDSNAFVG-------------------------------TALIDAFS 203
               +     K G DS   VG                               TA+I AFS
Sbjct: 393 TGELLHGYAIKSGMDSFVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISWTAMITAFS 452

Query: 204 VCGCVEFARKVFDGL-------FNDCF---------EEALNFFSQMRAVGFKPNNFTFAF 247
             G ++ AR+ FD +       +N            EE +  +  MR+   KP+  TFA 
Sbjct: 453 QNGDIDRARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVKPDWVTFAT 512

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
            ++AC  L TI++         K     D+ VA +++ +Y++ G+I  AR++F+ +  K+
Sbjct: 513 SIRACADLATIKLGTQVVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEARKVFDSIHVKN 572

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL 359
           +I W+ M+A +AQ  L   A+E +  M +    P+  ++V+VL       GL
Sbjct: 573 LISWNAMMAAFAQNGLGNKAIETYEDMLRTECKPDHISYVAVLSDLLGRAGL 624


>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic [Vitis vinifera]
 gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
          Length = 802

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 230/736 (31%), Positives = 385/736 (52%), Gaps = 28/736 (3%)

Query: 98  LNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNP 157
           L+ YV+   + +A  LF+ M + +T  +   I+G+  +  F +AV  +  +   G   + 
Sbjct: 67  LSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDN 126

Query: 158 FAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG 217
           F +   +K    +        V   V K G D + ++G +LI  ++  GC+E A  VF  
Sbjct: 127 FTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFRE 186

Query: 218 L-------FNDCFE---------EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVA 261
           +       +N              +L+ F +M+A G K + F+   +L AC     +R  
Sbjct: 187 MPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNG 246

Query: 262 KSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQT 321
           K  H   +++  E+D+ V  +L+D+Y K G +  A R+F+++  K ++ W+ MI  Y+  
Sbjct: 247 KEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLN 306

Query: 322 DLSIDAVELFCRMRQAF-VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFV 380
             S ++     +M++   + P+  T +++L  CA +E + LG  +H   +R G L  + +
Sbjct: 307 AQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVL 366

Query: 381 SNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQV 440
             AL+D+Y +CG+++ +  LF +  +RN ++WN MI  Y + GE  KAM +F  +  + +
Sbjct: 367 ETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTL 426

Query: 441 PATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARL 500
                T +S+L A A LA+L    Q+H    K   D +  V+N+++ MY KCG++  AR 
Sbjct: 427 KPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRARE 486

Query: 501 VFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGL 560
           +FD M   + +SWN +I  Y++HG     +++F  M+++G+ PN  TFV +L +CS  GL
Sbjct: 487 IFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGL 546

Query: 561 LEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
           + +G  YF SM  +Y I P IEHY  ++ L+GR G+LD A   IE +P  P+  IW +LL
Sbjct: 547 VNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMPLAPTARIWGSLL 606

Query: 621 GACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASK 669
            A     +VE+  ++A+HIL  E ++   +VLLSN+YA A  WE           +   K
Sbjct: 607 TASRNKGDVELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGRWEDVERIKFHMKKEGLEK 666

Query: 670 EPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDE 729
             G S ++       F   D S  ++N++  +L+ ++ K  +  Y+  L+       E +
Sbjct: 667 SVGCSVVDLSSKTFRFVNQDRSDNEINMVYDVLDIISKKIGEDVYVHSLTKFRPSDLEKK 726

Query: 730 KERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVH 789
           +      HS +LA+ F L      +P+ + KN+RIC  CH   K IS+  +REII+RD  
Sbjct: 727 RANSAKSHSLRLAICFGLISTTIGNPVLVRKNIRICEACHRFAKRISETTKREIIVRDSK 786

Query: 790 RFHHFQDGCCSCGDFW 805
            FHHF  G CSCGD+W
Sbjct: 787 IFHHFNGGHCSCGDYW 802



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/470 (24%), Positives = 234/470 (49%), Gaps = 20/470 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           ++ +Y   +++C    DL     +H +V+K G  LD++  N L+ +Y K+  +  A  +F
Sbjct: 125 DNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVF 184

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
            EMP R+ +S+ + I GY        ++  F  +   G +L+ F+    L      G+  
Sbjct: 185 REMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLR 244

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------- 218
               +   + +   + +  V T+L+D ++ CG +++A ++FD +                
Sbjct: 245 NGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYS 304

Query: 219 FNDCFEEALNFFSQMRAVG-FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
            N    E+  +  +M+  G   P+  T   +L  C  L+ I + KS HG A++  +   L
Sbjct: 305 LNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHL 364

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
            +  AL+D+Y + G++  A  +F +M ++++I W+ MIA Y +   +  A+ LF  +   
Sbjct: 365 VLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNK 424

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            + P+  T  S+L A A +  L    QIH  V ++ L S+ FVSN+++ +Y KCG +  +
Sbjct: 425 TLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRA 484

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
            E+F     ++ ++WNT+I+ Y   G    ++ +FS+M E+       T+ S+L +C+  
Sbjct: 485 REIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVA 544

Query: 458 AALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDARLVFDMM 505
             +  G + +  ++K +Y+++  + +   ++D+  + G++  A+   + M
Sbjct: 545 GLVNEGWE-YFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEM 593


>gi|356546233|ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Glycine max]
          Length = 582

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 219/560 (39%), Positives = 331/560 (59%), Gaps = 12/560 (2%)

Query: 258 IRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIAR 317
           +R  + AH   + T       +   LL L   +G I+  RR+F  +   D   ++ +I  
Sbjct: 23  LRRLQQAHAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVSDPDSFLFNSLIKA 82

Query: 318 YAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD 377
            ++   S+DAV  + RM  + + P+ +TF SV++ACA +  L +G  +HS V   G  SD
Sbjct: 83  SSKFGFSLDAVLFYRRMLLSRIVPSTYTFTSVIKACADLSLLCIGTLVHSHVFVSGYASD 142

Query: 378 VFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
            FV  AL+  YAK      + ++F E P+R+ V WN+MI GY Q G   +A+ +F+KM E
Sbjct: 143 SFVQAALIAFYAKSCTPRVARKVFDEMPQRSIVAWNSMISGYEQNGLANEAVEVFNKMRE 202

Query: 438 EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITD 497
            +V     T+ SVL AC+ L +L+ G  +H   V +   M+VV+A +L++M+++CG +  
Sbjct: 203 SRVEPDSATFVSVLSACSQLGSLDFGCWLHDCIVGSGITMNVVLATSLVNMFSRCGDVGR 262

Query: 498 ARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSN 557
           AR VF  M + N V W AMISGY MHG   E ++VF  M+ RG  PN++TFV VLSAC++
Sbjct: 263 ARAVFYSMIEGNVVLWTAMISGYGMHGYGVEAMEVFHRMKARGVVPNSVTFVAVLSACAH 322

Query: 558 GGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSV-MIW 616
            GL+++G + F SM   YG+ P +EH+  MV + GR G L++A + ++G+     V  +W
Sbjct: 323 AGLIDEGRSVFASMKQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVKGLNSDELVPAVW 382

Query: 617 RALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-------- 668
            A+LGAC +H N ++G   A+++++ EPE+   +VLLSN+YA+A   ++  S        
Sbjct: 383 TAMLGACKMHKNFDLGVEVAENLINAEPENPGHYVLLSNMYALAGRMDRVESVRNVMIQR 442

Query: 669 ---KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDV 725
              K+ G S I+     + F  GD SH + N I   L+ L  + + AGY P   + + ++
Sbjct: 443 GLKKQVGYSTIDVDNRSYLFSMGDKSHPETNEIYCFLDELIWRCKDAGYAPVPESAMHEL 502

Query: 726 REDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIII 785
             +E+E  L  HSEKLA+AF L K      +RI+KNLRIC DCH+AIK IS ++ REII+
Sbjct: 503 EGEEREYALRYHSEKLAVAFGLMKTGDGVTLRIVKNLRICEDCHSAIKFISAVMNREIIV 562

Query: 786 RDVHRFHHFQDGCCSCGDFW 805
           RD  RFHHF++G CSC D+W
Sbjct: 563 RDKLRFHHFREGSCSCSDYW 582



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 183/368 (49%), Gaps = 29/368 (7%)

Query: 188 HDSNAFVGTALIDAFSVCGCVEFARKVFDG-------LFNDCFE---------EALNFFS 231
           H S A + T L+      G + + R++F         LFN   +         +A+ F+ 
Sbjct: 39  HRSRALL-TKLLTLSCAAGSIAYTRRLFRSVSDPDSFLFNSLIKASSKFGFSLDAVLFYR 97

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
           +M      P+ +TF  V+KAC  L  + +    H     + Y  D +V  AL+  Y KS 
Sbjct: 98  RMLLSRIVPSTYTFTSVIKACADLSLLCIGTLVHSHVFVSGYASDSFVQAALIAFYAKSC 157

Query: 292 EISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQ 351
               AR++F+EMP++ ++ W+ MI+ Y Q  L+ +AVE+F +MR++ V P+  TFVSVL 
Sbjct: 158 TPRVARKVFDEMPQRSIVAWNSMISGYEQNGLANEAVEVFNKMRESRVEPDSATFVSVLS 217

Query: 352 ACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
           AC+ +  LD G  +H  +V  G+  +V ++ +L++++++CG +  +  +F    + N V 
Sbjct: 218 ACSQLGSLDFGCWLHDCIVGSGITMNVVLATSLVNMFSRCGDVGRARAVFYSMIEGNVVL 277

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
           W  MI GY   G   +AM +F +M    V    VT+ +VL ACA    ++ G  V   ++
Sbjct: 278 WTAMISGYGMHGYGVEAMEVFHRMKARGVVPNSVTFVAVLSACAHAGLIDEGRSVFA-SM 336

Query: 472 KANYDMDVVVAN--ALIDMYAKCGSITDARLVFDMMNDWNEVS--WNAMISGYSMHGLSA 527
           K  Y +   V +   ++DM+ + G + +A      +N    V   W AM+    MH    
Sbjct: 337 KQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVKGLNSDELVPAVWTAMLGACKMH---- 392

Query: 528 EVLKVFDL 535
              K FDL
Sbjct: 393 ---KNFDL 397



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 89/383 (23%), Positives = 159/383 (41%), Gaps = 36/383 (9%)

Query: 27  GLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKG 86
           G S  A L  ++   S   P T++        + + +++C     L     +H  V   G
Sbjct: 87  GFSLDAVLFYRRMLLSRIVPSTYT--------FTSVIKACADLSLLCIGTLVHSHVFVSG 138

Query: 87  NCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFS 146
              D F    L+  Y K      A K+FDEMP+R+ +++ + I GY  +    EAV +F+
Sbjct: 139 YASDSFVQAALIAFYAKSCTPRVARKVFDEMPQRSIVAWNSMISGYEQNGLANEAVEVFN 198

Query: 147 TLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCG 206
            +     E +   F + L     +G  +    +  C+   G   N  + T+L++ FS CG
Sbjct: 199 KMRESRVEPDSATFVSVLSACSQLGSLDFGCWLHDCIVGSGITMNVVLATSLVNMFSRCG 258

Query: 207 CVEFARKVFDGLFNDCF----------------EEALNFFSQMRAVGFKPNNFTFAFVLK 250
            V  AR VF  +                      EA+  F +M+A G  PN+ TF  VL 
Sbjct: 259 DVGRARAVFYSMIEGNVVLWTAMISGYGMHGYGVEAMEVFHRMKARGVVPNSVTFVAVLS 318

Query: 251 ACLGLDTIRVAKSAHGCALKTCYEMDLYVA--VALLDLYTKSGEISNARRIFEEMPKKDV 308
           AC     I   +S    ++K  Y +   V   V ++D++ + G ++ A +  + +   ++
Sbjct: 319 ACAHAGLIDEGRSVFA-SMKQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVKGLNSDEL 377

Query: 309 IP--WSFMIAR---YAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
           +P  W+ M+     +   DL ++  E           P  +  +S + A A    +D   
Sbjct: 378 VPAVWTAMLGACKMHKNFDLGVEVAENLINAEPE--NPGHYVLLSNMYALAGR--MDRVE 433

Query: 364 QIHSLVVRVGLLSDVFVSNALMD 386
            + +++++ GL   V  S   +D
Sbjct: 434 SVRNVMIQRGLKKQVGYSTIDVD 456


>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
 gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
          Length = 923

 Score =  410 bits (1055), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 253/791 (31%), Positives = 409/791 (51%), Gaps = 47/791 (5%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNC-LDLFATNVLLNVYVKLNRLPDATKL 113
           N  +Y   L +C    ++ T   I  +V   G+  LD+     ++N Y K   L  A  +
Sbjct: 140 NDVTYVAVLGACGHPWEVDT---IRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGV 196

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLV-SMGW 172
           FD +  R+   +   I       Q  EA+ LF  +   G   N     A L     S  +
Sbjct: 197 FDGILVRDAAVWNAMISLLVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDF 256

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------------- 218
           +E    + A   +L  D++  V TAL++ +   G V+ A ++F+ +              
Sbjct: 257 SEALR-IHAFARELAGDADTVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTA 315

Query: 219 --FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL------GLDTIRVAKSAHGCALK 270
              N   ++A   F +M  VG  P+  T+  +L AC         D ++      GC ++
Sbjct: 316 NACNGFHDKAFKCFREMLLVGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIE 375

Query: 271 TCYEMDLYVAVALLDLYTK----SGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSID 326
           +   +D+ +  A++++Y++        S++  + ++  +  ++ W+ +++ Y + +   +
Sbjct: 376 S---VDVVMGTAIMNMYSRCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEE 432

Query: 327 AVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMD 386
           A  +F  M    V  +  + ++V  AC +   L+ G  IHSL+    L     V NAL+ 
Sbjct: 433 AFTIFRLMLLGGVTIDTVSLMTVFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVT 492

Query: 387 VYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVT 446
           +YA+ G +E++ E+F     RN ++W  M+  + QLG   +A+ +F  +L E V   EVT
Sbjct: 493 MYARLGSLEDAREIFDAMTTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVT 552

Query: 447 YSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN 506
           +++VL AC +LA++     V     +  +  +V VAN L+    KCGS+ +    F +M 
Sbjct: 553 FTAVLNACGNLASIPAAKLVQACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMA 612

Query: 507 DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEA 566
             N+VSWN  I+  + HG     +++F  MQ  G    ++T +GVLS+CS+ GL+ QG +
Sbjct: 613 VKNQVSWNTAIAANAQHGNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYS 672

Query: 567 YFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF-QPSVMIWRALLGACII 625
           YF +M  +YG     EHY+ ++ LL RAG L+ A + ++ +PF   SV  W  LL  C +
Sbjct: 673 YFLNMHVDYGFPAEAEHYSCVIDLLSRAGWLEHAEEFVKRLPFGDQSVFPWITLLCGCKL 732

Query: 626 HNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLS 674
           H ++E G  + Q IL   P     ++++ N+YA A  W +AA+           KEPGLS
Sbjct: 733 HGDLERGGRATQRILGLNPGSTGPYLVMHNLYAGAGKWPEAAAVRKSMVELGPKKEPGLS 792

Query: 675 WIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYL 734
           WIE +G +H FR GDTSH   + I   LE LN + ++AG++ D+ AV+ D++  EKE  L
Sbjct: 793 WIEVKGRIHEFRVGDTSHPRSSEIHRELERLNEEMKRAGFVCDIKAVVYDLQAKEKESLL 852

Query: 735 WVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHF 794
             HSEKLA+AF L       P+RI+KNLR+C DCH+A K IS +V REI++RD +RFHHF
Sbjct: 853 CQHSEKLAIAFGLISTAAGEPLRIMKNLRVCSDCHSATKFISGLVGREIVVRDAYRFHHF 912

Query: 795 QDGCCSCGDFW 805
           + G CSC DFW
Sbjct: 913 RGGACSCEDFW 923



 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 169/620 (27%), Positives = 284/620 (45%), Gaps = 29/620 (4%)

Query: 33  ALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLF 92
           + ST    + T     F     ++ ++A  +  C +  DL     IH  +L+ G  +  F
Sbjct: 17  SFSTSAPQHRTDELKYFDDGSADASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDF 76

Query: 93  ATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREG 152
               LL +Y K     +A  +F  + +++ +++ + I     S    EA  LF  +  +G
Sbjct: 77  LGARLLAMYCKCGSPEEARAVFQGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQG 136

Query: 153 HELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGH-DSNAFVGTALIDAFSVCGCVEFA 211
              N   + A   VL + G       + A V   G  + +  V TA+++A+  CG ++ A
Sbjct: 137 VMPNDVTYVA---VLGACGHPWEVDTIRARVEACGSLELDVIVATAVMNAYGKCGDLDSA 193

Query: 212 RKVFDGLF----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGL 255
             VFDG+                 ++  +EAL  F QMR  G  PN  T    L AC   
Sbjct: 194 WGVFDGILVRDAAVWNAMISLLVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHS 253

Query: 256 DTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMI 315
                A   H  A +   + D  V  AL+++Y K G++ +A  IFE + ++DV+ W+ M+
Sbjct: 254 RDFSEALRIHAFARELAGDADTVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAML 313

Query: 316 ARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL- 374
              A       A + F  M      P++ T+V++L AC     L  G+ + +L V  G  
Sbjct: 314 TANACNGFHDKAFKCFREMLLVGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCG 373

Query: 375 --LSDVFVSNALMDVYAKC----GRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKA 428
               DV +  A+M++Y++C        +S+ L  +  + + + WNT++  YV+  +  +A
Sbjct: 374 IESVDVVMGTAIMNMYSRCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEA 433

Query: 429 MIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDM 488
             +F  ML   V    V+  +V  AC S A+LE G  +H L  ++       V NAL+ M
Sbjct: 434 FTIFRLMLLGGVTIDTVSLMTVFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTM 493

Query: 489 YAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTF 548
           YA+ GS+ DAR +FD M   N +SW AM+  +S  GL+ E L++F  +   G  PN +TF
Sbjct: 494 YARLGSLEDAREIFDAMTTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTF 553

Query: 549 VGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIP 608
             VL+AC N   +   +   ++ ++  G    +E    ++  LG+ G L++ A   + + 
Sbjct: 554 TAVLNACGNLASIPAAK-LVQACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMA 612

Query: 609 FQPSVMIWRALLGACIIHNN 628
            +  V  W   + A   H N
Sbjct: 613 VKNQVS-WNTAIAANAQHGN 631


>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 685

 Score =  410 bits (1055), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 216/597 (36%), Positives = 334/597 (55%), Gaps = 11/597 (1%)

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           N  F E L+ F  +R  G   + FTF  VLKAC      ++    H   +K  +  D+  
Sbjct: 89  NHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFNHDVAA 148

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
             +LL +Y+ SG +++A ++FEE+P++ V+ W+ + + Y       +A++LF +M +  V
Sbjct: 149 MTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGV 208

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
            P+ +  V VL AC  +  LD G  I   +  + +  + FV   L+++YAKCG+ME +  
Sbjct: 209 RPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARS 268

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +F    +++ VTW+TMI GY       + +  F +ML+E +   + +    L +CASL A
Sbjct: 269 VFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGA 328

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
           L+ G     L  +  +  ++ +ANALIDMYAKCG++     VF  M + + V  NA ISG
Sbjct: 329 LDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISG 388

Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
            + +G       VF   ++ G  P+  TF+G+L  C + GL++ G  +F ++   Y ++ 
Sbjct: 389 LAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKR 448

Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHI 639
            +EHY  MV L GRAG LD A +LI  +P +P+ ++W ALL  C +  + ++     + +
Sbjct: 449 TVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKEL 508

Query: 640 LDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAG 688
           +  EP +   +V LSNIY+++  W++AA            K PG SWIE +G VH F A 
Sbjct: 509 IALEPWNAGNYVQLSNIYSVSGRWDEAAEVRDMMNRKGMKKIPGYSWIELEGTVHEFLAD 568

Query: 689 DTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALF 748
           D SH   + I   LE L  + R  G++P    V  DV ++EKER L  HSEKLA+AF L 
Sbjct: 569 DKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEDEEKERVLGHHSEKLAVAFGLI 628

Query: 749 KMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
                  IR++KNLR+C DCH  +K+ISKI +REI++RD +RFH F +G CSC D+W
Sbjct: 629 STDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 82/267 (30%), Positives = 140/267 (52%)

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           +F      ++  ++ +I  +    L  + ++LF  +R+  +  + FTF  VL+AC     
Sbjct: 67  LFSHTQFPNIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASN 126

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
             LG  +HSLVV+ G   DV    +L+ +Y+  GR+ ++ ++F E P+R+ VTW  +  G
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSG 186

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           Y   G+  +A+ +F KM+E  V         VL AC  +  L+ G  +     +     +
Sbjct: 187 YTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKN 246

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
             V   L+++YAKCG +  AR VFD M + + V+W+ MI GY+ +    E ++ F  M Q
Sbjct: 247 SFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQ 306

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGE 565
              +P+  + VG LS+C++ G L+ GE
Sbjct: 307 ENLKPDQFSIVGFLSSCASLGALDLGE 333



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/382 (24%), Positives = 182/382 (47%), Gaps = 24/382 (6%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           ++   L++C +  + +  + +H  V+K G   D+ A   LL++Y    RL DA K+F+E+
Sbjct: 113 TFPLVLKACTRASNRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEI 172

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
           PER+ +++     GYT + +  EA+ LF  +   G   + +     L   V +G  +   
Sbjct: 173 PERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGE 232

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GLFNDC 222
            +   + ++    N+FV T L++ ++ CG +E AR VFD               G  ++ 
Sbjct: 233 WIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNS 292

Query: 223 F-EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
           F +E + FF QM     KP+ F+    L +C  L  + + +       +  +  +L++A 
Sbjct: 293 FPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMAN 352

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           AL+D+Y K G ++    +F+EM +KD++  +  I+  A+      +  +F +  +  ++P
Sbjct: 353 ALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISP 412

Query: 342 NQFTFVSVLQACA----TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
           +  TF+ +L  C       +GL   N I  +     L   V     ++D++ + G ++++
Sbjct: 413 DGSTFLGLLCGCVHAGLIQDGLRFFNAISCV---YALKRTVEHYGCMVDLWGRAGMLDDA 469

Query: 398 VELFAESPKR-NHVTWNTMIVG 418
             L  + P R N + W  ++ G
Sbjct: 470 YRLICDMPMRPNAIVWGALLSG 491



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 128/257 (49%), Gaps = 2/257 (0%)

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
           Q+H  ++   L  D F+ N L+       +   S  LF+ +   N   +NT+I G+V   
Sbjct: 31  QVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSHTQFPNIFLYNTLINGFVNNH 90

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN 483
              + + +F  + +  +     T+  VL+AC   +  + G+ +H L VK  ++ DV    
Sbjct: 91  LFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFNHDVAAMT 150

Query: 484 ALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRP 543
           +L+ +Y+  G + DA  VF+ + + + V+W A+ SGY+  G   E + +F  M + G RP
Sbjct: 151 SLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRP 210

Query: 544 NNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKL 603
           ++   V VLSAC + G L+ GE   K M     ++      T++V+L  + G ++KA  +
Sbjct: 211 DSYFIVQVLSACVHVGDLDSGEWIVKHM-EEMEMQKNSFVRTTLVNLYAKCGKMEKARSV 269

Query: 604 IEGIPFQPSVMIWRALL 620
            + +  +  ++ W  ++
Sbjct: 270 FDSMG-EKDIVTWSTMI 285


>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g15510, chloroplastic; Flags: Precursor
 gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
 gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
 gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 866

 Score =  410 bits (1055), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 242/737 (32%), Positives = 385/737 (52%), Gaps = 31/737 (4%)

Query: 95  NVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLF-STLHREGH 153
           N  L ++V+   L DA  +F +M ERN  S+   + GY     F EA+ L+   L   G 
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192

Query: 154 ELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARK 213
           + + + F   L+    +        V   V + G++ +  V  ALI  +  CG V+ AR 
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252

Query: 214 VFD---------------GLF-NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDT 257
           +FD               G F N    E L  F  MR +   P+  T   V+ AC  L  
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGD 312

Query: 258 IRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIAR 317
            R+ +  H   + T + +D+ V  +L  +Y  +G    A ++F  M +KD++ W+ MI+ 
Sbjct: 313 RRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 372

Query: 318 YAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD 377
           Y    L   A++ +  M Q  V P++ T  +VL ACAT+  LD G ++H L ++  L+S 
Sbjct: 373 YEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY 432

Query: 378 VFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
           V V+N L+++Y+KC  ++ ++++F   P++N ++W ++I G ++L       ++F + ++
Sbjct: 433 VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAG-LRLNNRCFEALIFLRQMK 491

Query: 438 EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITD 497
             +    +T ++ L ACA + AL  G ++H   ++    +D  + NAL+DMY +CG +  
Sbjct: 492 MTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNT 551

Query: 498 ARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSN 557
           A   F+     +  SWN +++GYS  G  + V+++FD M +   RP+ +TF+ +L  CS 
Sbjct: 552 AWSQFNSQKK-DVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSK 610

Query: 558 GGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWR 617
             ++ QG  YF  M  +YG+ P ++HY  +V LLGRAG L +A K I+ +P  P   +W 
Sbjct: 611 SQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWG 669

Query: 618 ALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----KEPG 672
           ALL AC IH+ +++G LSAQHI + + +    ++LL N+YA    W + A      KE G
Sbjct: 670 ALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENG 729

Query: 673 L------SWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVR 726
           L      SW+E +G VH F + D  H     I  +LE    K  + G      +   D  
Sbjct: 730 LTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDET 789

Query: 727 EDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIR 786
           E  ++     HSE+ A+AF L    P  PI + KNL +C +CH  +K ISK V+REI +R
Sbjct: 790 EISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVR 849

Query: 787 DVHRFHHFQDGCCSCGD 803
           D   FHHF+DG CSCGD
Sbjct: 850 DAEHFHHFKDGECSCGD 866



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/409 (26%), Positives = 201/409 (49%), Gaps = 3/409 (0%)

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           N   EEA+   + M+ +    +   F  +++ C            +  AL +   + + +
Sbjct: 72  NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVEL 131

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ-AF 338
             A L ++ + G + +A  +F +M ++++  W+ ++  YA+     +A+ L+ RM     
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           V P+ +TF  VL+ C  +  L  G ++H  VVR G   D+ V NAL+ +Y KCG ++++ 
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            LF   P+R+ ++WN MI GY + G   + + +F  M    V    +T +SV+ AC  L 
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
               G  +H   +   + +D+ V N+L  MY   GS  +A  +F  M   + VSW  MIS
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMIS 371

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           GY  + L  + +  + +M Q   +P+ +T   VLSAC+  G L+ G    K  +    I 
Sbjct: 372 GYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLIS 431

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
             I    +++++  +   +DKA  +   IP + +V+ W +++    ++N
Sbjct: 432 YVIVA-NNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLRLNN 478


>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
           isoform 1 [Vitis vinifera]
          Length = 672

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 234/659 (35%), Positives = 356/659 (54%), Gaps = 75/659 (11%)

Query: 181 ACVYKLGHDSNAFVGTALIDAF------------SVCGCVEFARK----VFDGLFNDCFE 224
           A + + GH  ++++  +L+ ++            S     +F RK    +++ +   C E
Sbjct: 55  ALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIE 114

Query: 225 -----EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
                +A+  + +M    F+PN +T+  VLKAC     +      H   +K     D ++
Sbjct: 115 NNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHI 174

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKK-DVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
             + + +Y   G +  ARRI ++   + D + W+ MI  Y +      A ELF  M    
Sbjct: 175 LSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGM---- 230

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
             P++                                S +   NA++  +++CG +E + 
Sbjct: 231 --PDR--------------------------------SMISTWNAMISGFSRCGMVEVAR 256

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
           E F E  +R+ ++W+ MI GY+Q G   +A+ +F +M +E++   +    SVL ACA+L 
Sbjct: 257 EFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLG 316

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           AL+ G  +H    + +  +D V+  +L+DMYAKCG I  A  VF+ M++    SWNAMI 
Sbjct: 317 ALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIG 376

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           G +MHG + + + +F  M      PN +TFVGVL+AC++GGL+++G   F SM   YG+E
Sbjct: 377 GLAMHGRAEDAIDLFSKMD---INPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVE 433

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P IEHY  +V LLGRAG L +A K++  IP +P+  +W ALLGAC  H NVE+G    + 
Sbjct: 434 PQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKI 493

Query: 639 ILDFEPEDEATHVLLSNIYAMARSWEKAAS-----KE------PGLSWIE-NQGMVHYFR 686
           +L+ EP++   + LLSNIYA A  WE+        KE      PG S I+  +G VH F 
Sbjct: 494 LLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFI 553

Query: 687 AGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFA 746
            GD SH  +  I  ML+ +  + +  GY PD S VL D+ E+EKE  +W HSEKLA+ F 
Sbjct: 554 IGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFG 613

Query: 747 LFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           L    P + IRI+KNLR+C DCH+A K+IS++  REII+RD  R+HHF++G CSC DFW
Sbjct: 614 LINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 672



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 100/405 (24%), Positives = 168/405 (41%), Gaps = 74/405 (18%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N ++Y   L++C     +   + +H  ++K G   D    +  + +Y    RL +A ++ 
Sbjct: 136 NKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRIL 195

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D+                                  +G E++   + A +   +  G  E
Sbjct: 196 DD----------------------------------KGGEVDAVCWNAMIDGYLRFGEVE 221

Query: 175 LCPCVFACVYKLGHDSNAFVGT--ALIDAFSVCGCVEFARKVFD---------------G 217
               +F      G    + + T  A+I  FS CG VE AR+ FD               G
Sbjct: 222 AARELFE-----GMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDG 276

Query: 218 LFND-CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
              + CF EAL  F QM+    +P  F    VL AC  L  +   +  H  A +   ++D
Sbjct: 277 YIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLD 336

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
             +  +L+D+Y K G I  A  +FE+M  K+V  W+ MI   A    + DA++LF +M  
Sbjct: 337 GVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD- 395

Query: 337 AFVAPNQFTFVSVLQACA----TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCG 392
             + PN+ TFV VL ACA      +GL + N   S+    G+   +     ++D+  + G
Sbjct: 396 --INPNEITFVGVLNACAHGGLVQKGLTIFN---SMRKEYGVEPQIEHYGCIVDLLGRAG 450

Query: 393 RMENSVELFAESPKR-NHVTWNTMIV-----GYVQLGE-VGKAMI 430
            +  + ++ +  P       W  ++      G V+LGE VGK ++
Sbjct: 451 LLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILL 495



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 142/337 (42%), Gaps = 71/337 (21%)

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCG-----RMENSVELFAESPKRNHVTWNTMIV 417
            Q H+L++R G L D +++ +L+  YA          E+S+ +F    K N   WN MI 
Sbjct: 51  KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 110

Query: 418 GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY-- 475
             ++  E  KA++++ +M+       + TY +VL+AC+    +  G+QVH   VK     
Sbjct: 111 VCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGG 170

Query: 476 ------------------------------DMDVVVANALIDMYAKCGSITDARLVFDMM 505
                                         ++D V  NA+ID Y + G +  AR +F+ M
Sbjct: 171 DGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGM 230

Query: 506 ND------WN--------------------------EVSWNAMISGYSMHGLSAEVLKVF 533
            D      WN                          E+SW+AMI GY   G   E L++F
Sbjct: 231 PDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIF 290

Query: 534 DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGR 593
             MQ+   RP       VLSAC+N G L+QG  +  +      I+      TS+V +  +
Sbjct: 291 HQMQKEKIRPRKFVLPSVLSACANLGALDQGR-WIHTYAKRNSIQLDGVLGTSLVDMYAK 349

Query: 594 AGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
            G +D A ++ E +     V  W A++G   +H   E
Sbjct: 350 CGRIDLAWEVFEKMS-NKEVSSWNAMIGGLAMHGRAE 385


>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 228/611 (37%), Positives = 337/611 (55%), Gaps = 79/611 (12%)

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
            +D  +A+ L+  Y+  GE S AR IF+   +K+V+ ++ MI  Y   +L ++A+ +F  
Sbjct: 68  RIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQV 127

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALM-------- 385
           M      P+ +TF  VL+AC+ ++ L +G Q+H  +V+VGL +++F+ NAL+        
Sbjct: 128 MLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGC 187

Query: 386 --------------DV---------YAKCGRMENSVELFAE----------------SP- 405
                         DV         YA+ G+ ++++E+  E                SP 
Sbjct: 188 LREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPV 247

Query: 406 --------------------KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEV 445
                               K+N ++WN MI  YV      +A+ +F +M E  +    V
Sbjct: 248 VCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAV 307

Query: 446 TYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMM 505
           T +S+L AC  L+AL  G ++H    K N   ++++ NAL+DMYAKCG + +AR VFD M
Sbjct: 308 TIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKM 367

Query: 506 NDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE 565
              + VSW +M+S Y   G   + + +F  M   G  P+++ FV VLSACS+ GLL+QG 
Sbjct: 368 RLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGR 427

Query: 566 AYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACII 625
            YF+ M   YGI P IEH+  MV L GRAG +++A   I+ +P +P+  +W ALL AC +
Sbjct: 428 HYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRV 487

Query: 626 HNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLS 674
           H+ ++IG ++A  +    P+    +VLLSNIYA A  W+   +           K PG+S
Sbjct: 488 HSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGIS 547

Query: 675 WIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYL 734
            +E  G VH F AGD  H     I G L+ L  K ++ GYIP   + L DV  ++KE +L
Sbjct: 548 NVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTESALHDVEVEDKECHL 607

Query: 735 WVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHF 794
            +HSEKLA+ FA+      +PIRI KNLR+C DCH AIK+ISKIV R II+RD +RFHHF
Sbjct: 608 AIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIVSRNIIVRDCNRFHHF 667

Query: 795 QDGCCSCGDFW 805
            +G CSCGD+W
Sbjct: 668 SNGICSCGDYW 678



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 115/444 (25%), Positives = 212/444 (47%), Gaps = 19/444 (4%)

Query: 97  LLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELN 156
           L+  Y        A  +FD   E+N + F   I+ Y  ++ +VEA+ +F  +       +
Sbjct: 77  LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136

Query: 157 PFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD 216
            + F   LK    +    +   V   + K+G D+N F+G AL+  +  CGC+  ARKV D
Sbjct: 137 HYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLD 196

Query: 217 GLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
            +    + + +++ S +   G+  +   F   L+ C  +D++ +   A   A        
Sbjct: 197 QM---PYRDVVSWNSMV--AGYAQSG-QFDDALEICKEMDSLNLNHDAGTMA-------- 242

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
              +++ +  YT    +     +FE M KK++I W+ MIA Y    +  +AV LF +M +
Sbjct: 243 ---SLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEE 299

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             + P+  T  S+L AC  +  L LG ++H  + +  L  ++ + NAL+D+YAKCG +E 
Sbjct: 300 CGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEE 359

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           + ++F +   R+ V+W +M+  Y + G+   A+ +F+KML+       + + SVL AC+ 
Sbjct: 360 ARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSH 419

Query: 457 LAALEPGMQ-VHCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWN 514
              L+ G      +T +      +     ++D++ + G + +A   +  M  + NE  W 
Sbjct: 420 TGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWG 479

Query: 515 AMISGYSMHGLSAEVLKVFDLMQQ 538
           A++S   +H      L   DL+ Q
Sbjct: 480 ALLSACRVHSKMDIGLVAADLLFQ 503



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 176/365 (48%), Gaps = 21/365 (5%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           + +++   L++C   D+L+  + +H  ++K G   +LF  N L+ +Y K   L +A K+ 
Sbjct: 136 DHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVL 195

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D+MP R+ +S+ + + GY  S QF +A+ +   +  +   LN  A T           A 
Sbjct: 196 DQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEM--DSLNLNHDAGT----------MAS 243

Query: 175 LCPCV-FACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQM 233
           L P V +  +  + +  N F    +     +   V  A  V + + N    EA++ F QM
Sbjct: 244 LSPVVCYTSLENVQYIHNMF--ERMTKKNLISWNVMIAIYVNNSMPN----EAVSLFLQM 297

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
              G KP+  T A +L AC  L  + + +  H    K     +L +  ALLD+Y K G +
Sbjct: 298 EECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCL 357

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
             AR +F++M  +DV+ W+ M++ Y ++    DAV LF +M  +   P+   FVSVL AC
Sbjct: 358 EEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSAC 417

Query: 354 ATMEGLDLGNQIHSLVV-RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVT 411
           +    LD G     ++  + G++  +     ++D++ + G +E +     + P + N   
Sbjct: 418 SHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERV 477

Query: 412 WNTMI 416
           W  ++
Sbjct: 478 WGALL 482



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 94/176 (53%), Gaps = 1/176 (0%)

Query: 358 GLDLGNQIHS-LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMI 416
           G+   N++HS +V+   L  D  ++  LM  Y+  G    +  +F  S ++N V +N MI
Sbjct: 50  GIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMI 109

Query: 417 VGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD 476
             YV      +A+ +F  ML         T+  VL+AC+ L  L  G+QVH   VK   D
Sbjct: 110 RSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLD 169

Query: 477 MDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
            ++ + NAL+ MY KCG + +AR V D M   + VSWN+M++GY+  G   + L++
Sbjct: 170 TNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEI 225



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 7/175 (4%)

Query: 453 ACASLAALEPGMQ----VHC-LTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND 507
           AC  +    PG++    +H  + +  +  +D  +A  L+  Y+  G  + AR +FD   +
Sbjct: 40  ACEVILDQYPGIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLE 99

Query: 508 WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAY 567
            N V +N MI  Y  + L  E L +F +M    + P++ TF  VL ACS    L  G   
Sbjct: 100 KNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQV 159

Query: 568 FKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
             ++V   G++  +    ++V++ G+ G L +A K+++ +P++  V+ W +++  
Sbjct: 160 HDAIV-KVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYR-DVVSWNSMVAG 212



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 107/260 (41%), Gaps = 37/260 (14%)

Query: 60  ATSLQSCIQNDDLQTAMTIHCQVLKKGNCL-DLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           A+ L +C     L     +H + ++KGN   +L   N LL++Y K   L +A  +FD+M 
Sbjct: 310 ASLLPACGDLSALFLGRRLH-KYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMR 368

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG------- 171
            R+ +S+ + +  Y  S Q  +AV LF+ +   G   +  AF + L      G       
Sbjct: 369 LRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRH 428

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFS 231
           +  +    +  V ++ H +       ++D F   G V               EEA +F  
Sbjct: 429 YFRMMTEQYGIVPRIEHFA------CMVDLFGRAGEV---------------EEAYSFIK 467

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
           QM     +PN   +  +L AC     + +   A     +   +   Y  V L ++Y K+G
Sbjct: 468 QM---PMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYY-VLLSNIYAKAG 523

Query: 292 ---EISNARRIFEEMPKKDV 308
              ++ N R   +++  K V
Sbjct: 524 MWKDVMNVRYAMKKIGIKKV 543


>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Brachypodium distachyon]
          Length = 822

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 229/692 (33%), Positives = 370/692 (53%), Gaps = 27/692 (3%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N    A++L++C Q+  +     +H   ++ G   +++    L+N+Y K+  +  A  +F
Sbjct: 113 NEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVF 172

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D +P +N +++   I GY+   Q   A+ LF  +  +G   + F   + +    ++G+ E
Sbjct: 173 DALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSACSALGFLE 232

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD----------------GL 218
                    Y++  +++A V  ALID +  C  +  ARK+FD                 +
Sbjct: 233 GGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYM 292

Query: 219 FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            N C  EA+  F Q+   G++P+ F  A +L +C  L  I   +  H  A+K   E D Y
Sbjct: 293 QNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEY 352

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V  +L+D+Y K   ++ AR +FE + + D I ++ MI  Y++      A+++F +MR   
Sbjct: 353 VKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCS 412

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           + P+  TFVS+L   ++   ++L  QIH L+V+ G   D++  ++L+DVY+K   +E++ 
Sbjct: 413 LKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAK 472

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            +F     R+ V WN MI G  Q  +  +A+ +F+++    +   E T+ +++   ++L 
Sbjct: 473 AVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLV 532

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           ++  G Q H   +KA  D D  V+NALIDMYAKCG I + RL+F+     + + WN+MIS
Sbjct: 533 SMFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMIS 592

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
            Y+ HG + E L VF +M   G  PN +TFVGVLSAC++ GL+++G  +F  M   Y IE
Sbjct: 593 TYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSACAHAGLVDEGLRHFDFMKTKYAIE 652

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P  EHY S+V+L GR+G L  A + IE +P +P+  +WR+LL AC +  NVEIGR + + 
Sbjct: 653 PGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPAAAVWRSLLSACHLFGNVEIGRYATEM 712

Query: 639 ILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRA 687
            L  +P D    VL+SNIYA    W  A             KEPG SWIE    VH F A
Sbjct: 713 ALLADPADSGPSVLMSNIYASRGLWSDAQKLRQGMDCAGVVKEPGYSWIEVMKEVHTFIA 772

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLS 719
               H + ++I  +L+ L    +  GY+PD S
Sbjct: 773 RGREHPEADVIYSLLDELTSILKNGGYLPDTS 804



 Score =  289 bits (739), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 175/592 (29%), Positives = 301/592 (50%), Gaps = 25/592 (4%)

Query: 60  ATSLQSCIQNDDLQTAMTI-HCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           A  L SC+  D L   + + H + +  G   DLF  N+LL  Y KL R+ DA +LFD MP
Sbjct: 14  AQLLLSCLAGDRLHRLLPLAHARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMP 73

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHRE--GHELNPFAFTAFLKVLVSMGWAELC 176
            +N +S+ + I  +       +AV LF+   R   G   N F   + L+           
Sbjct: 74  HKNLVSWGSAISMHAQHGCEEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFG 133

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL--------------FNDC 222
             V     ++G D N +VGTALI+ ++  GC++ A  VFD L              ++  
Sbjct: 134 QQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQI 193

Query: 223 FEE--ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
            +   AL  F +M   G +P+ F  A  + AC  L  +   +  HG A +   E D  V 
Sbjct: 194 GQGGVALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVI 253

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
            AL+DLY K   +S AR++F+ M  ++++ W+ MIA Y Q     +A+ +F ++ Q    
Sbjct: 254 NALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQ 313

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           P+ F   S+L +C ++  +  G Q+H+  ++  L SD +V N+L+D+YAKC  +  +  +
Sbjct: 314 PDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAV 373

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F    + + +++N MI GY +LG++  A+ +FSKM    +  + +T+ S+L   +S +A+
Sbjct: 374 FEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAI 433

Query: 461 EPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY 520
           E   Q+H L VK+   +D+   ++LID+Y+K   + DA+ VF++M++ + V WNAMI G 
Sbjct: 434 ELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGL 493

Query: 521 SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPC 580
           + +    E +K+F+ +Q  G  PN  TFV +++  S    +  G+  F + +   G +  
Sbjct: 494 AQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQ-FHAQIIKAGADS- 551

Query: 581 IEHYTS--MVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
            +H+ S  ++ +  + G + +   L E       V+ W +++     H   E
Sbjct: 552 -DHHVSNALIDMYAKCGFIKEGRLLFEST-LGKDVICWNSMISTYAQHGQAE 601


>gi|125577145|gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
          Length = 730

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 224/635 (35%), Positives = 346/635 (54%), Gaps = 41/635 (6%)

Query: 211 ARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLG 254
           AR++FDG+                 N      L  F +M  +G  P+++T    L ACL 
Sbjct: 92  ARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLA 151

Query: 255 LDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFM 314
              + + K  HG A+K   E    +  +L  LY K G + +A R F  +P+K+VI W+ M
Sbjct: 152 SCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTM 211

Query: 315 IARYAQTDLSID-AVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
           I+  A+ +  ++  + LF  M    V PN+FT  SV+  C T   L+LG Q+ +   ++G
Sbjct: 212 ISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIG 271

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK------ 427
             +++ V N+ M +Y + G  + ++ LF +    + +TWN MI GY Q+ +  K      
Sbjct: 272 CETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQAR 331

Query: 428 -----AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
                A+ +F  +    +     T+SS+L  C+++ ALE G Q+H  T+K+ +  DVVV 
Sbjct: 332 SRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVN 391

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
           +AL++MY KCG I DA   F  M     V+W +MISGYS HG   E +++F+ M+  G R
Sbjct: 392 SALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVR 451

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           PN +TFV +LSACS  GL+E+ E YF  M   Y IEP ++HY  M+ +  R G ++ A  
Sbjct: 452 PNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFS 511

Query: 603 LIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARS 662
            I+   F+P+  IW +L+  C  H N+E+   +A  +L+ +P+   T++LL N+Y     
Sbjct: 512 FIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTER 571

Query: 663 WEKAA-------SKEPGL----SWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRK 711
           W+  A        ++ G+    SWI  +  V++FRA D +H     +  +LE L  K++ 
Sbjct: 572 WQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAKA 631

Query: 712 AGYIPDLSAVLRDVREDEKER--YLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCH 769
            GY P  +A L D  +DEK     L  HSE+LA+A  L + PP + +R+ KN+ +C DCH
Sbjct: 632 IGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATVRVTKNITMCRDCH 691

Query: 770 TAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
           ++IK+ S +  REII+RD  R H F+DG CSCGDF
Sbjct: 692 SSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 726



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 141/485 (29%), Positives = 237/485 (48%), Gaps = 41/485 (8%)

Query: 71  DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQ 130
           D+Q AMT+    L +G  +       LL+   +     DA +LFD MPERN +++   + 
Sbjct: 62  DVQEAMTM----LTEGKAVQSAMYVPLLHRAAR-----DARRLFDGMPERNVVTWTALVT 112

Query: 131 GYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDS 190
           GYT++SQ    + +F  +   G   + +   A L   ++    +L   V     K G +S
Sbjct: 113 GYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAES 172

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFDGLFN-----------------DCFEEALNFFSQM 233
              +G +L   ++  G ++ A + F  +                   +C E  ++ F  M
Sbjct: 173 ITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDM 232

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
              G  PN FT   V+  C     + + K     + K   E +L V  + + LY + GE 
Sbjct: 233 LMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGET 292

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQ------TDL-----SIDAVELFCRMRQAFVAPN 342
             A R+FE+M    +I W+ MI+ YAQ       DL        A+ +F  ++++ + P+
Sbjct: 293 DEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPD 352

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
            FTF S+L  C+ M  L+ G QIH+  ++ G LSDV V++AL+++Y KCG ++++ + F 
Sbjct: 353 LFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFL 412

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
           E P R  VTW +MI GY Q G+  +A+ +F +M    V   E+T+ S+L AC S A L  
Sbjct: 413 EMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSAC-SYAGLVE 471

Query: 463 GMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISG 519
             + +   +K  Y ++ VV +   +IDM+ + G + DA   +     + NE  W+++++G
Sbjct: 472 EAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAG 531

Query: 520 YSMHG 524
              HG
Sbjct: 532 CRSHG 536



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 120/454 (26%), Positives = 208/454 (45%), Gaps = 55/454 (12%)

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
           +ARR+F+ MP+++V+ W+ ++  Y         +E+F  M +    P+ +T  + L AC 
Sbjct: 91  DARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACL 150

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
               +DLG Q+H   ++ G  S   + N+L  +YAK G +++++  F   P++N +TW T
Sbjct: 151 ASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTT 210

Query: 415 MIVGYVQLGE-VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
           MI    +  E V   M +F  ML + V   E T +SV+  C +   L  G QV   + K 
Sbjct: 211 MISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKI 270

Query: 474 NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSA------ 527
             + ++ V N+ + +Y + G   +A  +F+ M D + ++WNAMISGY+    SA      
Sbjct: 271 GCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQA 330

Query: 528 -----EVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE---------AYFKSMVA 573
                + L +F  +++   +P+  TF  +LS CS    LEQGE          +   +V 
Sbjct: 331 RSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVV 390

Query: 574 N------YGIEPCIEH---------------YTSMVSLLGRAGHLDKAAKLIEGIPF--- 609
           N      Y    CI+                +TSM+S   + G   +A +L E +     
Sbjct: 391 NSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGV 450

Query: 610 QPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAASK 669
           +P+ + + +LL AC     VE     A+H  D   ++     ++ +   M   + +    
Sbjct: 451 RPNEITFVSLLSACSYAGLVE----EAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRV 506

Query: 670 EPGLSWIE------NQGMVHYFRAGDTSHADMNI 697
           E   S+I+      N+ +     AG  SH +M +
Sbjct: 507 EDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMEL 540



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 101/428 (23%), Positives = 192/428 (44%), Gaps = 31/428 (7%)

Query: 49  FSVSEFNSH-SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRL 107
             +  + SH +   +L +C+ + D+     +H   +K G        N L ++Y KL  L
Sbjct: 131 LEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSL 190

Query: 108 PDATKLFDEMPERNTISFVTTIQGYTVSSQFVE-AVGLFSTLHREGHELNPFAFTAFLKV 166
             A + F  +PE+N I++ T I       + VE  + LF  +  +G   N F  T+ + +
Sbjct: 191 DSALRAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSL 250

Query: 167 LVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN------ 220
             +     L   V A  +K+G ++N  V  + +  +   G  + A ++F+ + +      
Sbjct: 251 CGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITW 310

Query: 221 ---------------DCFE------EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIR 259
                          D  +      +AL  F  ++    KP+ FTF+ +L  C  +  + 
Sbjct: 311 NAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALE 370

Query: 260 VAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYA 319
             +  H   +K+ +  D+ V  AL+++Y K G I +A + F EMP +  + W+ MI+ Y+
Sbjct: 371 QGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYS 430

Query: 320 QTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVF 379
           Q     +A++LF  MR A V PN+ TFVS+L AC+    ++       ++ +   +  V 
Sbjct: 431 QHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVV 490

Query: 380 VS-NALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
                ++D++ + GR+E++      +  + N   W++++ G    G +  A     K+LE
Sbjct: 491 DHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLE 550

Query: 438 EQVPATEV 445
            +    E 
Sbjct: 551 LKPKGIET 558



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 108/266 (40%), Gaps = 32/266 (12%)

Query: 50  SVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD 109
           SV + +  ++++ L  C     L+    IH Q +K G   D+   + L+N+Y K   + D
Sbjct: 347 SVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQD 406

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A K F EMP R  +++ + I GY+   Q  EA+ LF  +   G   N   F + L     
Sbjct: 407 ANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSY 466

Query: 170 MGWAELCPCVFACVYK-------LGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDC 222
            G  E     F  + K       + H         +ID F   G VE A           
Sbjct: 467 AGLVEEAEHYFDMMKKEYCIEPVVDHYG------CMIDMFVRLGRVEDA----------- 509

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
                  FS ++  GF+PN   ++ ++  C     + +A  A    L+      +   + 
Sbjct: 510 -------FSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLE-LKPKGIETYIL 561

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDV 308
           LL++Y  +    +  R+ + M ++DV
Sbjct: 562 LLNMYISTERWQDVARVRKLMKQEDV 587


>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
          Length = 870

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 248/736 (33%), Positives = 379/736 (51%), Gaps = 31/736 (4%)

Query: 95  NVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHE 154
           N +L++ V+   +  A ++F +MPER+  S+   + GY       EA+ L+  +   G  
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMR 194

Query: 155 LNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKV 214
            + + F   L+    +    +   V A V + G      V  AL+  ++ CG +  ARKV
Sbjct: 195 PDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKV 254

Query: 215 FDGL-FNDCF---------------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTI 258
           FDG+   DC                E  L  F  M     +PN  T   V  A   L  +
Sbjct: 255 FDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEV 314

Query: 259 RVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARY 318
             AK  HG A+K  + +D+    +L+ +YT  G + +A +IF  M  KD + W+ MI+ Y
Sbjct: 315 GFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGY 374

Query: 319 AQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDV 378
            +      A+E++  M    V+P+  T  S L ACA +  LD+G ++H L    G +  V
Sbjct: 375 EKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYV 434

Query: 379 FVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE 438
            V+NAL+++YAK   ++ ++E+F    +++ V+W++MI G+       +A+  F  ML  
Sbjct: 435 VVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGH 494

Query: 439 QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDA 498
             P   VT+ + L ACA+  AL  G ++H   ++     +  V NAL+D+Y KCG  + A
Sbjct: 495 VKP-NSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYA 553

Query: 499 RLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNG 558
              F + ++ + VSWN M+SG+  HGL    L +F+ M + G  P+ +TFV +L ACS  
Sbjct: 554 WAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRA 613

Query: 559 GLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRA 618
           G++ QG   F  M   + I P ++HY  MV LL R G L +A  LI  +P +P   +W A
Sbjct: 614 GMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGA 673

Query: 619 LLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAA 667
           LL  C IH +VE+G L+A+ IL+ EP D A HVLL ++Y  A  W           EK  
Sbjct: 674 LLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGL 733

Query: 668 SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVRE 727
            ++ G SW+E +G+ H F   D SH  +  I  +L  +  + +  G+ P  S   ++V E
Sbjct: 734 EQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAPVESLEDKEVSE 793

Query: 728 DEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRD 787
           D+    L  HSE+LA+AF L    P + I + KN   C  CH   K IS+IV+REI +RD
Sbjct: 794 DD---ILCGHSERLAVAFGLINTTPGTTISVTKNRYTCQSCHVIFKAISEIVRREITVRD 850

Query: 788 VHRFHHFQDGCCSCGD 803
             + H F+DG CSCGD
Sbjct: 851 TKQLHCFKDGDCSCGD 866



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 133/488 (27%), Positives = 234/488 (47%), Gaps = 25/488 (5%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
           +++   L++C    D +    +H  VL+ G   ++   N L+ +Y K   +  A K+FD 
Sbjct: 198 YTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDG 257

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFL---KVLVSMGWA 173
           M   + IS+   I G+  + +    + LF T+     + N    T+      +L  +G+A
Sbjct: 258 MAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFA 317

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF---------------DGL 218
           +    +     K G   +     +LI  ++  G +  A K+F                G 
Sbjct: 318 KE---MHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGY 374

Query: 219 FNDCF-EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
             + F ++AL  ++ M      P++ T A  L AC  L  + V    H  A    +   +
Sbjct: 375 EKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYV 434

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
            VA ALL++Y KS  I  A  +F+ M +KDV+ WS MIA +     S +A+  F R    
Sbjct: 435 VVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYF-RYMLG 493

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            V PN  TF++ L ACA    L  G +IH+ V+R G+ S+ +V NAL+D+Y KCG+   +
Sbjct: 494 HVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYA 553

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
              F+   +++ V+WN M+ G+V  G    A+ +F++M+E      EVT+ ++L AC+  
Sbjct: 554 WAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRA 613

Query: 458 AALEPGMQV-HCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNA 515
             +  G ++ H +T K +   ++     ++D+ ++ G +T+A  L+  M    +   W A
Sbjct: 614 GMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGA 673

Query: 516 MISGYSMH 523
           +++G  +H
Sbjct: 674 LLNGCRIH 681



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/385 (25%), Positives = 177/385 (45%), Gaps = 34/385 (8%)

Query: 75  AMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTV 134
           A  +H   +K+G  +D+   N L+ +Y  L R+ DA K+F  M  ++ +S+   I GY  
Sbjct: 317 AKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEK 376

Query: 135 SSQFVEAVGLFSTLHREGHELNPFAFT--AFLKVLVSMGWAELCPCVFACVYKLGHDSNA 192
           +    +A+ +++ +  E H ++P   T  + L     +G  ++   +       G     
Sbjct: 377 NGFPDKALEVYALM--ELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYV 434

Query: 193 FVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAV 236
            V  AL++ ++    ++ A +VF  +                FN    EAL +F  M   
Sbjct: 435 VVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLG- 493

Query: 237 GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNA 296
             KPN+ TF   L AC     +R  K  H   L+     + YV  ALLDLY K G+ S A
Sbjct: 494 HVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYA 553

Query: 297 RRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA-- 354
              F    +KDV+ W+ M++ +    L   A+ LF +M +    P++ TFV++L AC+  
Sbjct: 554 WAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRA 613

Query: 355 --TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVT 411
              ++G +L    H +  +  ++ ++     ++D+ ++ G++  +  L    P K +   
Sbjct: 614 GMVIQGWEL---FHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAV 670

Query: 412 WNTMIVG-----YVQLGEVGKAMIM 431
           W  ++ G     +V+LGE+   +I+
Sbjct: 671 WGALLNGCRIHRHVELGELAAKVIL 695



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 137/281 (48%), Gaps = 4/281 (1%)

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           P++  +V++ + C     +D G +  +          + + NA++ +  + G + ++  +
Sbjct: 94  PDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRV 153

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           FA+ P+R+  +WN M+ GY ++G + +A+ ++ +ML   +     T+  VLR C  +   
Sbjct: 154 FAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDW 213

Query: 461 EPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY 520
             G +VH   ++  +  +V V NAL+ MYAKCG I  AR VFD M   + +SWNAMI+G+
Sbjct: 214 RMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGH 273

Query: 521 SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAY-FKSMVANYGIEP 579
             +      L++F  M +   +PN +T   V  A  +G L E G A          G   
Sbjct: 274 FENHECEAGLELFLTMLENEVQPNLMTITSVTVA--SGMLSEVGFAKEMHGFAVKRGFAI 331

Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
            +    S++ +    G +  A K+   +  +   M W A++
Sbjct: 332 DVAFCNSLIQMYTSLGRMGDAGKIFSRMETK-DAMSWTAMI 371



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 105/261 (40%), Gaps = 32/261 (12%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           NS ++  +L +C     L++   IH  VL+ G   + +  N LL++YVK  +   A   F
Sbjct: 498 NSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQF 557

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFL-----KVLVS 169
               E++ +S+   + G+        A+ LF+ +   G   +   F A L       +V 
Sbjct: 558 SVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVI 617

Query: 170 MGWA--ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEAL 227
            GW    +    F+ V  L H +       ++D  S  G +                EA 
Sbjct: 618 QGWELFHMMTEKFSIVPNLKHYA------CMVDLLSRVGKL---------------TEAY 656

Query: 228 NFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLY 287
           N  ++M     KP+   +  +L  C     + + + A    L+     D+   V L DLY
Sbjct: 657 NLINRMP---IKPDAAVWGALLNGCRIHRHVELGELAAKVILEL-EPNDVAYHVLLCDLY 712

Query: 288 TKSGEISNARRIFEEMPKKDV 308
           T +G+ +   R+ + M +K +
Sbjct: 713 TDAGKWAQVARVRKTMREKGL 733


>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 725

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 229/645 (35%), Positives = 344/645 (53%), Gaps = 53/645 (8%)

Query: 214 VFDGLFNDCFEEA-----LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCA 268
           VF+ L  D          + F+ ++R VG + +  +F  +LKA   +  +      HG A
Sbjct: 81  VFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMELHGFA 140

Query: 269 LKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAV 328
            K     D +V   L+D+Y   G I+ AR +F+EM ++DV+ W+ MI RY +  L  +A 
Sbjct: 141 FKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEAF 200

Query: 329 ELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV------------------ 370
           +LF  M+ + V P++    +++ AC     +     I+  ++                  
Sbjct: 201 KLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMY 260

Query: 371 -------------RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIV 417
                        R   + ++FVS A++  Y+K GR++++  +F ++  ++ V W TMI 
Sbjct: 261 AGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMIS 320

Query: 418 GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM 477
            Y +     +A+ +F +M    +    VT  SV+ AC +L  L+    VH  T     + 
Sbjct: 321 AYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLES 380

Query: 478 DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQ 537
            + + NALI+MYAKCG +  AR VF+ M   N VSW++MI+ ++MHG +++ L +F  M+
Sbjct: 381 VLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMK 440

Query: 538 QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHL 597
           Q    PN +TFVGVL  CS+ GL+E+G+  F SM   Y I P IEHY  MV L GRA  L
Sbjct: 441 QENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANLL 500

Query: 598 DKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIY 657
            +A ++IE +P  P+V+IW +L+ AC +H  +E+G L+A+ IL  EP+ +   VL+SNIY
Sbjct: 501 REALEVIESMPMAPNVVIWGSLMSACRVHGELELGELAAKRILKLEPDHDGALVLMSNIY 560

Query: 658 AMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLN 706
           A    W+           K   KE GLS I+  G  H F  GD  H   N I   L  + 
Sbjct: 561 AREYRWDYVRIIRWIMEKKKVFKEKGLSRIDLNGKSHEFLIGDKRHKQSNEIYTKLYEVV 620

Query: 707 MKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSP------IRIIK 760
            K + AGY+PD  +VL DV E+EK+  +  HSEKLAL F L              IRI+K
Sbjct: 621 SKLKLAGYVPDGGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNKEKEEEKGSCGVIRIVK 680

Query: 761 NLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           NLR+C DCH   K++SK+ + EII+RD  RFH ++DG CSC D+W
Sbjct: 681 NLRVCEDCHAFFKLVSKVYELEIIVRDRTRFHRYKDGLCSCRDYW 725



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/465 (24%), Positives = 215/465 (46%), Gaps = 50/465 (10%)

Query: 110 ATKLFDEM-PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLV 168
           A  LF  + P   +I F + ++  + S +    +  +  +   G   +  +F   LK + 
Sbjct: 66  ALNLFSSISPLPESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVS 125

Query: 169 SMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FND 221
            +        +    +K+   S+ FV T L+D ++ CG + +AR VFD +       +N 
Sbjct: 126 KVSALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNT 185

Query: 222 CFE---------EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC 272
             E         EA   F +M+     P+      ++ AC     +R  ++ +   ++  
Sbjct: 186 MIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIEND 245

Query: 273 YEMD-------------------------------LYVAVALLDLYTKSGEISNARRIFE 301
             MD                               L+V+ A++  Y+K+G + +AR IF+
Sbjct: 246 VRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFD 305

Query: 302 EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL 361
           +   KD++ W+ MI+ YA++D   +A+ +F  M  + + P+  T +SV+ AC  +  LD 
Sbjct: 306 QTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDK 365

Query: 362 GNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQ 421
              +H      GL S + + NAL+++YAKCG ++ + ++F + P RN V+W++MI  +  
Sbjct: 366 AKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAM 425

Query: 422 LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHC-LTVKANYDMDVV 480
            GE   ++ +F++M +E V   EVT+  VL  C+    +E G ++   +T + N    + 
Sbjct: 426 HGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIE 485

Query: 481 VANALIDMYAKCGSITDARLVFDMMN-DWNEVSWNAMISGYSMHG 524
               ++D++ +   + +A  V + M    N V W +++S   +HG
Sbjct: 486 HYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMSACRVHG 530



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 170/371 (45%), Gaps = 35/371 (9%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDE------MPERNTISFVTTIQGYTVSSQFVEAVG 143
           D+   N ++  Y +   L +A KLF+E      MP+   +  + +  G T + ++  A+ 
Sbjct: 179 DVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIY 238

Query: 144 LFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFS 203
            F        E +    T  L  LV+M     C  +    ++     N FV TA++  +S
Sbjct: 239 DFLI------ENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYS 292

Query: 204 VCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAF 247
             G ++ AR +FD                   +D  +EAL  F +M   G KP+  T   
Sbjct: 293 KAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLS 352

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
           V+ AC+ L T+  AK  H        E  L +  AL+++Y K G +  AR +FE+MP ++
Sbjct: 353 VISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRN 412

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIH- 366
           V+ WS MI  +A    + D++ LF +M+Q  V PN+ TFV VL  C+    ++ G +I  
Sbjct: 413 VVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFA 472

Query: 367 SLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTM-----IVGYV 420
           S+     +   +     ++D++ +   +  ++E+    P   N V W ++     + G +
Sbjct: 473 SMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMSACRVHGEL 532

Query: 421 QLGEVGKAMIM 431
           +LGE+    I+
Sbjct: 533 ELGELAAKRIL 543



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 65/308 (21%), Positives = 127/308 (41%), Gaps = 59/308 (19%)

Query: 76  MTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVS 135
           M +  +  +K +  +LF +  +++ Y K  RL DA  +FD+   ++ + + T I  Y  S
Sbjct: 266 MDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAES 325

Query: 136 SQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVG 195
               EA+ +F  +   G + +     + +   V++G  +    V    +  G +S   + 
Sbjct: 326 DHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPID 385

Query: 196 TALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFK 239
            ALI+ ++ CG ++ AR VF+ +                 +    ++L+ F+QM+    +
Sbjct: 386 NALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVE 445

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           PN  TF  VL  C                                   + SG +   ++I
Sbjct: 446 PNEVTFVGVLYGC-----------------------------------SHSGLVEEGKKI 470

Query: 300 FEEMPKK-DVIP----WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
           F  M  + ++ P    +  M+  + + +L  +A+E+   M    +APN   + S++ AC 
Sbjct: 471 FASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMP---MAPNVVIWGSLMSACR 527

Query: 355 TMEGLDLG 362
               L+LG
Sbjct: 528 VHGELELG 535


>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
 gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
          Length = 514

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 214/514 (41%), Positives = 308/514 (59%), Gaps = 42/514 (8%)

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           MR   V P+ FT   VL+AC  +  +  G  IH L  ++G  S++F+ N ++++Y  CG 
Sbjct: 1   MRLFDVLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGE 60

Query: 394 MENSVELFAESPKRNHVTWN-------------------------------TMIVGYVQL 422
           M +++ LF + P+R+ VTWN                               +MI G+VQ 
Sbjct: 61  MGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQC 120

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
           G+  +A+ +F K+ +E V   EVT  SVL ACA L  L+ G  VH  + K+ +  +V V 
Sbjct: 121 GKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVC 180

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
           N LIDMY KCG + +AR VF  M +   VSW+AMI+G +MHG + E L +F  M + G +
Sbjct: 181 NTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVK 240

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           PN +TF+G+L ACS+ GL+++G  +F SM A+YG+ P IEHY  +V L  RAG L++A +
Sbjct: 241 PNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHE 300

Query: 603 LIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARS 662
            I  +P +P+ ++W ALLG C +H N+++   + +H+ + +P ++  +V++SNIYA A  
Sbjct: 301 FILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAER 360

Query: 663 WEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRK 711
           WE AA            K  G S I   G+VH F AGD +H     I  + + L +K ++
Sbjct: 361 WEDAARVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDICKIWDKLLVKMKR 420

Query: 712 AGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTA 771
            GY P  S VL D+ E EKE++L+ HSEKLA+ F L   P  +PIRI+KNLR+C DCH A
Sbjct: 421 RGYAPKTSVVLLDMEEKEKEKFLYRHSEKLAVVFGLMTTPEGTPIRIMKNLRVCEDCHAA 480

Query: 772 IKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +KIIS IV REII+RD +RFH F+DG CSC DFW
Sbjct: 481 LKIISGIVSREIIVRDRNRFHCFRDGQCSCRDFW 514



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 171/336 (50%), Gaps = 38/336 (11%)

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           MR     P+ FT +FVLKACL L  +   K+ HG   K  +  +L++   +L+LY   GE
Sbjct: 1   MRLFDVLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGE 60

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYA-------------------------------QT 321
           + +A  +FE+MP++D + W+ +IA+ A                               Q 
Sbjct: 61  MGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQC 120

Query: 322 DLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVS 381
               +A++LF ++    V PN+ T VSVL ACA +  LDLG  +H    + G   +V V 
Sbjct: 121 GKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVC 180

Query: 382 NALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVP 441
           N L+D+Y KCG +EN+  +F E  +R  V+W+ MI G    G+  +A+ +FS+M++  V 
Sbjct: 181 NTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVK 240

Query: 442 ATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM--DVVVANALIDMYAKCGSITDA- 498
              VT+  +L AC+ +  ++ G +    ++ A+Y +   +     ++D++++ G + +A 
Sbjct: 241 PNGVTFIGLLHACSHMGLIDEGRRFFA-SMTADYGVIPQIEHYGCVVDLFSRAGLLEEAH 299

Query: 499 RLVFDMMNDWNEVSWNAMISGYSMH---GLSAEVLK 531
             +  M    N V W A++ G  +H    L+ E +K
Sbjct: 300 EFILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIK 335



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 122/501 (24%), Positives = 216/501 (43%), Gaps = 108/501 (21%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L++C++  D+    TIH    K G   +LF  N++LN+Y     + DA  LF++MP+R+ 
Sbjct: 17  LKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAMLLFEKMPQRDA 76

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +++   I                + L + G     + F  FL++                
Sbjct: 77  VTWNIVI----------------AQLAKRGDIDGAYGF--FLRM---------------- 102

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNN 242
                 + N    T++I  F  CG                  EA++ F ++     +PN 
Sbjct: 103 -----PNKNVRSWTSMISGFVQCGKPN---------------EAIDLFMKLEDEAVRPNE 142

Query: 243 FTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEE 302
            T   VL AC  L  + + +  H  + K+ ++ +++V   L+D+Y K G + NARR+F E
Sbjct: 143 VTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYVKCGCLENARRVFYE 202

Query: 303 MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG 362
           M ++ V+ WS MIA  A    + +A+ LF  M +  V PN  TF+ +L AC+ M  +D G
Sbjct: 203 MEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIGLLHACSHMGLIDEG 262

Query: 363 NQIH-SLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMIVGYV 420
            +   S+    G++  +     ++D++++ G +E + E     P K N V W  ++ G  
Sbjct: 263 RRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMPIKPNGVVWGALLGGC- 321

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV 480
              +V K +     + EE              A   L+ L+P           N    VV
Sbjct: 322 ---KVHKNI----DLAEE--------------AIKHLSELDP----------LNDGYYVV 350

Query: 481 VANALIDMYAKCGSITDARLVFDMMND--------WNEVSWNAM----ISGYSMHGLSAE 528
           ++N    +YA+     DA  V  +M D        W+ ++ N +    ++G   H  + +
Sbjct: 351 ISN----IYAEAERWEDAARVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAED 406

Query: 529 VLKVFD----LMQQRGWRPNN 545
           + K++D     M++RG+ P  
Sbjct: 407 ICKIWDKLLVKMKRRGYAPKT 427



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 107/261 (40%), Gaps = 32/261 (12%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +  + L +C    DL     +H    K G   ++   N L+++YVK   L +A ++F
Sbjct: 141 NEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYVKCGCLENARRVF 200

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
            EM ER  +S+   I G  +  Q  EA+ LFS + + G + N   F   L     MG  +
Sbjct: 201 YEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIGLLHACSHMGLID 260

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE--FARKVFDGLFNDCFEEALNFFSQ 232
                FA +              +I      GCV   F+R    GL     EEA  F   
Sbjct: 261 EGRRFFASMT---------ADYGVIPQIEHYGCVVDLFSRA---GL----LEEAHEFILS 304

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD-----LYVAVALLDLY 287
           M     KPN   +  +L  C     I +A+     A+K   E+D      YV ++  ++Y
Sbjct: 305 MP---IKPNGVVWGALLGGCKVHKNIDLAEE----AIKHLSELDPLNDGYYVVIS--NIY 355

Query: 288 TKSGEISNARRIFEEMPKKDV 308
            ++    +A R+ + M  + V
Sbjct: 356 AEAERWEDAARVRKLMKDRGV 376


>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g46790, chloroplastic; AltName: Full=Protein
           CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
 gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
 gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
 gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 657

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 215/600 (35%), Positives = 346/600 (57%), Gaps = 21/600 (3%)

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
            ++A+   SQ  +    P+  T+  ++  C    ++  A   H   L    + D ++A  
Sbjct: 62  LKQAIRVLSQESS----PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATK 117

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+ +Y+  G +  AR++F++  K+ +  W+ +           + + L+ +M +  V  +
Sbjct: 118 LIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESD 177

Query: 343 QFTFVSVLQACA----TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           +FT+  VL+AC     T+  L  G +IH+ + R G  S V++   L+D+YA+ G ++ + 
Sbjct: 178 RFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYAS 237

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPAT--EVTYSSVLRACAS 456
            +F   P RN V+W+ MI  Y + G+  +A+  F +M+ E   ++   VT  SVL+ACAS
Sbjct: 238 YVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACAS 297

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           LAALE G  +H   ++   D  + V +AL+ MY +CG +   + VFD M+D + VSWN++
Sbjct: 298 LAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSL 357

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           IS Y +HG   + +++F+ M   G  P  +TFV VL ACS+ GL+E+G+  F++M  ++G
Sbjct: 358 ISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHG 417

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
           I+P IEHY  MV LLGRA  LD+AAK+++ +  +P   +W +LLG+C IH NVE+   ++
Sbjct: 418 IKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERAS 477

Query: 637 QHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYF 685
           + +   EP++   +VLL++IYA A+ W+           +   K PG  W+E +  ++ F
Sbjct: 478 RRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSF 537

Query: 686 RAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAF 745
            + D  +  M  I   L  L    ++ GYIP    VL ++  +EKER +  HSEKLALAF
Sbjct: 538 VSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAF 597

Query: 746 ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            L       PIRI KNLR+C DCH   K ISK +++EI++RDV+RFH F++G CSCGD+W
Sbjct: 598 GLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/410 (24%), Positives = 181/410 (44%), Gaps = 45/410 (10%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           S  +  +Y   +  C     L  A+ +H  +L  G+  D F    L+ +Y  L  +  A 
Sbjct: 73  SSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYAR 132

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS-- 169
           K+FD+  +R    +    +  T++    E +GL+  ++R G E + F +T  LK  V+  
Sbjct: 133 KVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASE 192

Query: 170 ------MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----- 218
                 M   E    + A + + G+ S+ ++ T L+D ++  GCV++A  VF G+     
Sbjct: 193 CTVNHLMKGKE----IHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNV 248

Query: 219 ------------FNDCFEEALNFFSQMRAV-GFKPNNFTFAFVLKACLGLDTIRVAKSAH 265
                           FE    F   MR      PN+ T   VL+AC  L  +   K  H
Sbjct: 249 VSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIH 308

Query: 266 GCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSI 325
           G  L+   +  L V  AL+ +Y + G++   +R+F+ M  +DV+ W+ +I+ Y       
Sbjct: 309 GYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGK 368

Query: 326 DAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV-GLLSDVFVSNAL 384
            A+++F  M     +P   TFVSVL AC+    ++ G ++   + R  G+   +     +
Sbjct: 369 KAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACM 428

Query: 385 MDVYAKCGRMENSVELFAE-----SPKRNHVTWNTM-----IVGYVQLGE 424
           +D+  +  R++ + ++  +      PK     W ++     I G V+L E
Sbjct: 429 VDLLGRANRLDEAAKMVQDMRTEPGPK----VWGSLLGSCRIHGNVELAE 474



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/224 (25%), Positives = 107/224 (47%), Gaps = 13/224 (5%)

Query: 410 VTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCL 469
           ++ N +I    + G++ +A+    ++L ++   ++ TY  ++  C   ++L   ++VH  
Sbjct: 47  ISNNQLIQSLCKEGKLKQAI----RVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRH 102

Query: 470 TVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEV 529
            +    D D  +A  LI MY+  GS+  AR VFD         WNA+    ++ G   EV
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162

Query: 530 LKVFDLMQQRGWRPNNLTFVGVLSA-----CSNGGLLEQGEAYFKSMVANYGIEPCIEHY 584
           L ++  M + G   +  T+  VL A     C+   L++  E +  + +   G    +   
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIH--AHLTRRGYSSHVYIM 220

Query: 585 TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
           T++V +  R G +D A+ +  G+P + +V+ W A++ AC   N 
Sbjct: 221 TTLVDMYARFGCVDYASYVFGGMPVR-NVVSWSAMI-ACYAKNG 262


>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
          Length = 679

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 226/648 (34%), Positives = 356/648 (54%), Gaps = 35/648 (5%)

Query: 160 FTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF 219
           F + LK    M        V  C+ +LG   + +   AL++ +S    +E       G+ 
Sbjct: 13  FPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEG-----GVQ 67

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT----CYEM 275
             C  + L    + R +G   N+      L         RVA       L       Y++
Sbjct: 68  RFCDSKMLGGIPEPREIGKCSNSHDLPCELDE-------RVAGIDQNGDLNQMSNILYQV 120

Query: 276 DLYVAV----ALLDLYTKSGE----ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDA 327
           + Y  V       D+Y+K  +    + + R++FE MPK+D++ W+ +I+  AQ  +  DA
Sbjct: 121 NTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDA 180

Query: 328 VELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDV 387
           + +   M  A + P+ FT  SVL   A    L  G +IH   +R G  +DVF+ ++L+D+
Sbjct: 181 LMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDM 240

Query: 388 YAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTY 447
           YAKC R+++S  +F   P+ + ++WN++I G VQ G   + +  F +ML  ++    V++
Sbjct: 241 YAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSF 300

Query: 448 SSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND 507
           SS++ ACA L  L  G Q+H   +++ +D +V +A+AL+DMYAKCG+I  AR +FD M  
Sbjct: 301 SSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMEL 360

Query: 508 WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAY 567
           ++ VSW AMI GY++HG + + + +F  M+  G +PN + F+ VL+ACS+ GL+++   Y
Sbjct: 361 YDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKY 420

Query: 568 FKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
           F SM  +Y I P +EHY ++  LLGR G L++A + I  +  +P+  +W  LL AC +H 
Sbjct: 421 FNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHK 480

Query: 628 NVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWI 676
           N+E+    ++ +   +P++   +VLLSNIY+ A  W           +K   K+P  SWI
Sbjct: 481 NIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWI 540

Query: 677 ENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWV 736
           E +  VH F AGD SH   + I   L+ L  +  + GY+ D + VL DV E++K   L  
Sbjct: 541 EIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCS 600

Query: 737 HSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREII 784
           HSE+LA+ F +   P  + IR+ KNLR+CVDCHTA K ISKIV REI+
Sbjct: 601 HSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTATKFISKIVGREIV 648



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 177/374 (47%), Gaps = 28/374 (7%)

Query: 55  NSHSYATSLQSCI----QNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNR---- 106
           NSH     L   +    QN DL     I  QV       D   T+   +VY K  +    
Sbjct: 89  NSHDLPCELDERVAGIDQNGDLNQMSNILYQVNTYKKVFDEGKTS---DVYSKKEKESYY 145

Query: 107 LPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV 166
           L    K+F+ MP+R+ +S+ T I G   +    +A+ +   +       + F  ++ L +
Sbjct: 146 LGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPI 205

Query: 167 LVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF------DGLF- 219
                       +     + G+D++ F+G++LID ++ C  V+ + +VF      DG+  
Sbjct: 206 FAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISW 265

Query: 220 ---------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALK 270
                    N  F+E L FF QM     KPN+ +F+ ++ AC  L T+ + K  HG  ++
Sbjct: 266 NSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIR 325

Query: 271 TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVEL 330
           + ++ ++++A AL+D+Y K G I  AR IF++M   D++ W+ MI  YA    + DA+ L
Sbjct: 326 SRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISL 385

Query: 331 FCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVYA 389
           F RM    V PN   F++VL AC+    +D      +S+     ++  +    A+ D+  
Sbjct: 386 FKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLG 445

Query: 390 KCGRMENSVELFAE 403
           + GR+E + E  ++
Sbjct: 446 RVGRLEEAYEFISD 459



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 165/339 (48%), Gaps = 28/339 (8%)

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK--S 290
           M A G  P++  F  VLK+C  +  +R  +S HGC ++     DLY   AL+++Y+K  S
Sbjct: 1   MLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWS 60

Query: 291 GEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVL 350
            E    +R F +      IP    I + + +       +L C + +     +Q       
Sbjct: 61  LEEGGVQR-FCDSKMLGGIPEPREIGKCSNSH------DLPCELDERVAGIDQ------- 106

Query: 351 QACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR----MENSVELFAESPK 406
                    DL NQ+ +++ +V     VF      DVY+K  +    + +  ++F   PK
Sbjct: 107 -------NGDL-NQMSNILYQVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPK 158

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
           R+ V+WNT+I G  Q G    A++M  +M    +     T SSVL   A    L  G ++
Sbjct: 159 RDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEI 218

Query: 467 HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLS 526
           H   ++  YD DV + ++LIDMYAKC  + D+  VF M+   + +SWN++I+G   +G+ 
Sbjct: 219 HGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMF 278

Query: 527 AEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE 565
            E LK F  M     +PN+++F  ++ AC++   L  G+
Sbjct: 279 DEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGK 317



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/242 (22%), Positives = 106/242 (43%), Gaps = 24/242 (9%)

Query: 27  GLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKG 86
           G+   A +  ++  N+   P +F++S        + L    +  +L     IH   ++ G
Sbjct: 175 GMHEDALMMVREMGNADLRPDSFTLS--------SVLPIFAEYVNLLKGKEIHGYAIRNG 226

Query: 87  NCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFS 146
              D+F  + L+++Y K  R+ D+ ++F  +P+ + IS+ + I G   +  F E +  F 
Sbjct: 227 YDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQ 286

Query: 147 TLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCG 206
            +     + N  +F++ +     +    L   +   + +   D N F+ +AL+D ++ CG
Sbjct: 287 QMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCG 346

Query: 207 CVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLK 250
            +  AR +FD +                 +    +A++ F +M   G KPN   F  VL 
Sbjct: 347 NIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLT 406

Query: 251 AC 252
           AC
Sbjct: 407 AC 408



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/308 (23%), Positives = 133/308 (43%), Gaps = 34/308 (11%)

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM-ENSVE 399
           P+   F SVL++C  M+ L  G  +H  ++R+G+  D++  NALM++Y+K   + E  V+
Sbjct: 8   PDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEGGVQ 67

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
            F +S          M+ G  +  E+GK         E       +  +  L        
Sbjct: 68  RFCDS---------KMLGGIPEPREIGKCSNSHDLPCELDERVAGIDQNGDLN------- 111

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAK-------CGSITDARLVFDMMNDWNEVS 512
                Q+  +  + N    V       D+Y+K        GS+   R VF+MM   + VS
Sbjct: 112 -----QMSNILYQVNTYKKVFDEGKTSDVYSKKEKESYYLGSL---RKVFEMMPKRDIVS 163

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
           WN +ISG + +G+  + L +   M     RP++ T   VL   +    L +G+      +
Sbjct: 164 WNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAI 223

Query: 573 ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIG 632
            N G +  +   +S++ +  +   +D + ++   +P Q   + W +++  C+ +   + G
Sbjct: 224 RN-GYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLP-QHDGISWNSIIAGCVQNGMFDEG 281

Query: 633 RLSAQHIL 640
               Q +L
Sbjct: 282 LKFFQQML 289


>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
 gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
          Length = 604

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 216/573 (37%), Positives = 333/573 (58%), Gaps = 18/573 (3%)

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYT---KSGEISNARRIFEEMP 304
           +L  C  L+ +   K      +KT  + D+ V   L++  T    +  + +A  +F+++ 
Sbjct: 35  LLSKCTSLNEL---KQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQIL 91

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
            KD+I ++ M   YA+++    A  LF  +  + + P+ +TF S+L+ACA+ + L  G  
Sbjct: 92  DKDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMG 151

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
           +H   V++GL  ++++   L+++YA+C  M  +  +F E  +   V++N +I GY +  +
Sbjct: 152 LHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQ 211

Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA 484
             +A+ +F ++    +  T+VT  SV+ +CA L AL+ G  +H    K  +D  V V  A
Sbjct: 212 PNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTA 271

Query: 485 LIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPN 544
           LIDM+AKCGS+TDA  +F+ M   +  +W+AMI  ++ HG   + + +F+ M++ G RP+
Sbjct: 272 LIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPD 331

Query: 545 NLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLI 604
            +TF+G+L ACS+ GL+EQG  YF SM   YGI P I+HY  MV LLGRAGHLD+A   +
Sbjct: 332 EITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFV 391

Query: 605 EGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE 664
           + +  + + ++WR LL AC  H NVE+ +   + I + +      +V+LSN+YA    WE
Sbjct: 392 DKLEIKATPILWRTLLSACSTHGNVEMAKRVIERIFELDDAHGGDYVILSNLYARVGRWE 451

Query: 665 -----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAG 713
                      +   K PG S +E   +VH F +GD  H     +R  L+ L  + +  G
Sbjct: 452 DVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCVSVELRRALDELMKEIKLVG 511

Query: 714 YIPDLSAVLR-DVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAI 772
           Y+PD S V   D+ E+ KE  L  HSEKLA+AF L   PP + IR+ KNLRIC DCH A 
Sbjct: 512 YVPDTSLVYHADMEEEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVAKNLRICGDCHNAA 571

Query: 773 KIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           K+IS I  R+I+IRDV RFH F+DG CSCGDFW
Sbjct: 572 KLISFIFGRKIVIRDVQRFHRFEDGKCSCGDFW 604



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/322 (26%), Positives = 170/322 (52%), Gaps = 8/322 (2%)

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           A + F ++   G  P+++TF+ +LKAC     +R     H  A+K     ++Y+   L++
Sbjct: 114 AFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICPTLIN 173

Query: 286 LYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFT 345
           +Y +  +++ AR +F+EM +  ++ ++ +I  YA++    +A+ LF  ++ + + P   T
Sbjct: 174 MYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVT 233

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
            +SV+ +CA +  LDLG  IH  V + G    V V+ AL+D++AKCG + +++ +F    
Sbjct: 234 MLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMR 293

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
            R+   W+ MIV +   G+  KA+ MF +M  E V   E+T+  +L AC+    +E G +
Sbjct: 294 VRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQG-R 352

Query: 466 VHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDARLVFDMMN-DWNEVSWNAMISGYSM 522
            +  ++   Y +   + +   ++D+  + G + +A    D +      + W  ++S  S 
Sbjct: 353 GYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACST 412

Query: 523 HG---LSAEVL-KVFDLMQQRG 540
           HG   ++  V+ ++F+L    G
Sbjct: 413 HGNVEMAKRVIERIFELDDAHG 434



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 101/424 (23%), Positives = 184/424 (43%), Gaps = 29/424 (6%)

Query: 39  CSNSTTTPIT-FSVSEF--NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATN 95
           C  + T P + FS +EF  N     + L  C   ++L+    I    +K     D+    
Sbjct: 9   CQFTLTKPSSAFSKNEFVINQLHPLSLLSKCTSLNELKQ---IQAYTIKTNLQSDISVLT 65

Query: 96  VLLNVYVKLN----RLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHRE 151
            L+N +  LN     +  A  LFD++ +++ I F    +GY  S+    A  LF  L   
Sbjct: 66  KLIN-FCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFGELLCS 124

Query: 152 GHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFA 211
           G   + + F++ LK   S         +     KLG + N ++   LI+ ++ C  +  A
Sbjct: 125 GLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAA 184

Query: 212 RKVFDGLFNDCF----------------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGL 255
           R VFD +   C                  EAL+ F +++A   +P + T   V+ +C  L
Sbjct: 185 RGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALL 244

Query: 256 DTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMI 315
             + + K  H    K  ++  + V  AL+D++ K G +++A  IFE M  +D   WS MI
Sbjct: 245 GALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMI 304

Query: 316 ARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGL 374
             +A     + A+ +F  M++  V P++ TF+ +L AC+    ++ G    +S+    G+
Sbjct: 305 VAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGI 364

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAE-SPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
              +     ++D+  + G ++ +     +   K   + W T++      G V  A  +  
Sbjct: 365 TPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAKRVIE 424

Query: 434 KMLE 437
           ++ E
Sbjct: 425 RIFE 428


>gi|356534396|ref|XP_003535741.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g04780-like [Glycine max]
          Length = 632

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 215/577 (37%), Positives = 336/577 (58%), Gaps = 19/577 (3%)

Query: 247 FVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK 306
           ++L+ C    +    ++ H   ++   EMD+  +  L+++Y+K   + + R+  +EM  K
Sbjct: 55  YLLQLCAKTGSSMGGRACHAQIIRIGLEMDILTSTMLINMYSKCSLVHSTRKKXDEMLVK 114

Query: 307 DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIH 366
            +I  +  I    Q      A++L  RM++     N+FT  SVL  CA    +    Q+H
Sbjct: 115 SLILXNTRIGALTQNAEDRKALKLLIRMQREVTPFNEFTISSVLCNCAFKCAILECMQLH 174

Query: 367 SLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVG 426
           +  ++  + S+ FV  AL+ VYAKC  ++++ ++F   P++N VTW++M+ GYVQ G   
Sbjct: 175 AFSIKAAIDSNCFVXTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHD 234

Query: 427 KAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALI 486
           +A+++F               SS + ACA LA L  G QVH ++ K+ +  ++ VA++LI
Sbjct: 235 EALLLFHNAQLMGFDQDPFNISSAVSACAGLATLVEGKQVHAMSHKSGFGSNIYVASSLI 294

Query: 487 DMYAKCGSITDARLVFDMMNDWNE-VSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNN 545
           DMYAKCG I +A LVF+   +    V WNAMISG++ H L+ E + +F+ MQQRG+ P++
Sbjct: 295 DMYAKCGCIREAYLVFEGFVEVRSIVLWNAMISGFARHALAQEAMILFEKMQQRGFFPDD 354

Query: 546 LTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
           +T+V VL+ACS+ GL E+G+ YF  MV  + + P + HY+ M+ +LGRAG + KA  LI 
Sbjct: 355 VTYVSVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVQKAYDLIG 414

Query: 606 GIPFQPSVMIWRALLG-------ACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYA 658
            + F  +  +W ++ G       +C I+ N+E   ++A+H+ + EP +   H+LL+NIYA
Sbjct: 415 RMSFNATSSMWGSVRGLSXLIKASCRIYGNIEFAEIAAKHLFEMEPNNAGNHILLANIYA 474

Query: 659 MARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNM 707
             +  ++ A            KE G SWIE +  +H F  G+ +H  ++     L+ L +
Sbjct: 475 ANKKSDEVARARKLLRETDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDNYAKLDNLVV 534

Query: 708 KSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVD 767
           + +K  Y  D +  L DV E  K   L  HSEKLA+ F L  +P   PIRIIKNLRIC D
Sbjct: 535 ELKKLNYKVDTNNDLHDVEESRKHMLLGHHSEKLAITFGLVCLPTEIPIRIIKNLRICGD 594

Query: 768 CHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
           CHT +K++SK   REII+RD +RFHHF+DG CSCG+F
Sbjct: 595 CHTFMKLVSKFASREIIVRDTNRFHHFKDGLCSCGEF 631



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 177/365 (48%), Gaps = 25/365 (6%)

Query: 181 ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFE 224
           A + ++G + +    T LI+ +S C  V   RK  D +                 N    
Sbjct: 74  AQIIRIGLEMDILTSTMLINMYSKCSLVHSTRKKXDEMLVKSLILXNTRIGALTQNAEDR 133

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           +AL    +M+      N FT + VL  C     I      H  ++K   + + +V  ALL
Sbjct: 134 KALKLLIRMQREVTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFVXTALL 193

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
            +Y K   I +A ++FE MP+K+ + WS M+A Y Q     +A+ LF   +      + F
Sbjct: 194 HVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHDEALLLFHNAQLMGFDQDPF 253

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
              S + ACA +  L  G Q+H++  + G  S+++V+++L+D+YAKCG +  +  +F   
Sbjct: 254 NISSAVSACAGLATLVEGKQVHAMSHKSGFGSNIYVASSLIDMYAKCGCIREAYLVFEGF 313

Query: 405 PK-RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
            + R+ V WN MI G+ +     +AMI+F KM +      +VTY SVL AC+ +   E G
Sbjct: 314 VEVRSIVLWNAMISGFARHALAQEAMILFEKMQQRGFFPDDVTYVSVLNACSHMGLHEEG 373

Query: 464 MQVHCLTVKA-NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY-S 521
            +   L V+  N    V+  + +ID+  + G +  A   +D++     +S+NA  S + S
Sbjct: 374 QKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVQKA---YDLI---GRMSFNATSSMWGS 427

Query: 522 MHGLS 526
           + GLS
Sbjct: 428 VRGLS 432



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 174/370 (47%), Gaps = 40/370 (10%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           LQ C +          H Q+++ G  +D+  + +L+N+Y K + +    K  DEM  ++ 
Sbjct: 57  LQLCAKTGSSMGGRACHAQIIRIGLEMDILTSTMLINMYSKCSLVHSTRKKXDEMLVKSL 116

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           I   T I   T +++  +A+ L   + RE    N F  ++            LC C F C
Sbjct: 117 ILXNTRIGALTQNAEDRKALKLLIRMQREVTPFNEFTISSV-----------LCNCAFKC 165

Query: 183 V-----------YKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL------------- 218
                        K   DSN FV TAL+  ++ C  ++ A ++F+ +             
Sbjct: 166 AILECMQLHAFSIKAAIDSNCFVXTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMA 225

Query: 219 ---FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
               N   +EAL  F   + +GF  + F  +  + AC GL T+   K  H  + K+ +  
Sbjct: 226 GYVQNGFHDEALLLFHNAQLMGFDQDPFNISSAVSACAGLATLVEGKQVHAMSHKSGFGS 285

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPK-KDVIPWSFMIARYAQTDLSIDAVELFCRM 334
           ++YVA +L+D+Y K G I  A  +FE   + + ++ W+ MI+ +A+  L+ +A+ LF +M
Sbjct: 286 NIYVASSLIDMYAKCGCIREAYLVFEGFVEVRSIVLWNAMISGFARHALAQEAMILFEKM 345

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLS-DVFVSNALMDVYAKCGR 393
           +Q    P+  T+VSVL AC+ M   + G +   L+VR   LS  V   + ++D+  + G 
Sbjct: 346 QQRGFFPDDVTYVSVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGL 405

Query: 394 MENSVELFAE 403
           ++ + +L   
Sbjct: 406 VQKAYDLIGR 415



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 107/219 (48%), Gaps = 17/219 (7%)

Query: 51  VSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDA 110
           V+ FN  + ++ L +C     +   M +H   +K     + F    LL+VY K + + DA
Sbjct: 146 VTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFVXTALLHVYAKCSSIKDA 205

Query: 111 TKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSM 170
           +++F+ MPE+N +++ + + GY  +    EA+ LF      G + +PF  ++ +     +
Sbjct: 206 SQMFESMPEKNAVTWSSMMAGYVQNGFHDEALLLFHNAQLMGFDQDPFNISSAVSACAGL 265

Query: 171 GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG--------LFNDC 222
                   V A  +K G  SN +V ++LID ++ CGC+  A  VF+G        L+N  
Sbjct: 266 ATLVEGKQVHAMSHKSGFGSNIYVASSLIDMYAKCGCIREAYLVFEGFVEVRSIVLWNAM 325

Query: 223 F---------EEALNFFSQMRAVGFKPNNFTFAFVLKAC 252
                     +EA+  F +M+  GF P++ T+  VL AC
Sbjct: 326 ISGFARHALAQEAMILFEKMQQRGFFPDDVTYVSVLNAC 364


>gi|224079221|ref|XP_002305798.1| predicted protein [Populus trichocarpa]
 gi|222848762|gb|EEE86309.1| predicted protein [Populus trichocarpa]
          Length = 584

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 229/578 (39%), Positives = 342/578 (59%), Gaps = 15/578 (2%)

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           P++  +  +L+A      +++    H   + + Y    ++   LL+L   +G IS  R+I
Sbjct: 10  PHSPAYNLLLQAG---PRLKLLHQVHAHVIVSGYGCSRFLLTKLLNLACAAGSISYTRQI 66

Query: 300 FEEMPKKDVIPWSFMIARYAQ-TDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           F  +P  D   ++ +I   ++  + S+ ++  + RM  + VAP+ +TF SV+++CA +  
Sbjct: 67  FLIVPNPDSFLFTSLIRSTSKFHNFSVYSLYFYTRMVLSNVAPSNYTFTSVIKSCADLVA 126

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           L  G  IH  V+  G  SDV+V  ALM  Y KCG + N+ ++F +   R+ VTWN+MI G
Sbjct: 127 LRHGRIIHGHVLVNGFGSDVYVQTALMSFYGKCGVLCNARKVFDKMRDRSVVTWNSMISG 186

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           Y Q G   +A+ +F +M E  V     T+ SVL ACA L A   G  VH   V    D++
Sbjct: 187 YEQNGFAKEAIRLFDRMKEIGVEPNSATFVSVLSACAHLGAFILGCWVHEYAVGNGLDLN 246

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
           VV+  +LI+MY +CG+++ AR VFD M + N V+W AMISGY  +G  ++ +++F  M++
Sbjct: 247 VVLGTSLINMYTRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRR 306

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLD 598
            G  PN++TFV VLSAC++ GL+ +G   F+SM   Y + P +EH+  +V +LGRAG LD
Sbjct: 307 NGLLPNSITFVAVLSACAHAGLVNEGRRVFESMREEYRLVPEVEHHVCLVDMLGRAGLLD 366

Query: 599 KAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYA 658
           +A   I+ I  +P+  IW A+LGAC +H N  +G   A+H L  EP + A +V+LSNIYA
Sbjct: 367 EAYNFIKEIHEEPAPAIWTAMLGACKMHKNFGLGAQVAEHRLASEPGNPAHYVILSNIYA 426

Query: 659 MARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNM 707
           +A   +           K   K+ G S I+     + F  GD SH + N I   L+ L  
Sbjct: 427 LAGRMDQVEMVRDNMIRKCLKKQVGYSTIDLDRKTYLFSMGDKSHTETNEIYHYLDQLMR 486

Query: 708 KSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVD 767
           K R+AGY+    +V+ ++ E+E+E  L  HSEKLA+AF L K    + IRI+KNLR+C D
Sbjct: 487 KCREAGYVTVSDSVMHELEEEEREYALGYHSEKLAIAFGLLKTSRGTVIRIVKNLRMCED 546

Query: 768 CHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           CH+AIK IS I  REII+RD  RFHHF++G CSC D+W
Sbjct: 547 CHSAIKYISVISNREIIVRDKLRFHHFKNGSCSCLDYW 584



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 111/374 (29%), Positives = 187/374 (50%), Gaps = 24/374 (6%)

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF-----------------DGLFND 221
           V A V   G+  + F+ T L++     G + + R++F                    F++
Sbjct: 31  VHAHVIVSGYGCSRFLLTKLLNLACAAGSISYTRQIFLIVPNPDSFLFTSLIRSTSKFHN 90

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
               +L F+++M      P+N+TF  V+K+C  L  +R  +  HG  L   +  D+YV  
Sbjct: 91  FSVYSLYFYTRMVLSNVAPSNYTFTSVIKSCADLVALRHGRIIHGHVLVNGFGSDVYVQT 150

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           AL+  Y K G + NAR++F++M  + V+ W+ MI+ Y Q   + +A+ LF RM++  V P
Sbjct: 151 ALMSFYGKCGVLCNARKVFDKMRDRSVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVEP 210

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           N  TFVSVL ACA +    LG  +H   V  GL  +V +  +L+++Y +CG +  + E+F
Sbjct: 211 NSATFVSVLSACAHLGAFILGCWVHEYAVGNGLDLNVVLGTSLINMYTRCGNVSKAREVF 270

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
               +RN V W  MI GY   G   +A+ +F +M    +    +T+ +VL ACA    + 
Sbjct: 271 DSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLLPNSITFVAVLSACAHAGLVN 330

Query: 462 PGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMIS 518
            G +V   +++  Y +   V +   L+DM  + G + +A   + ++  +     W AM+ 
Sbjct: 331 EGRRVF-ESMREEYRLVPEVEHHVCLVDMLGRAGLLDEAYNFIKEIHEEPAPAIWTAMLG 389

Query: 519 GYSMH---GLSAEV 529
              MH   GL A+V
Sbjct: 390 ACKMHKNFGLGAQV 403



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/372 (24%), Positives = 171/372 (45%), Gaps = 19/372 (5%)

Query: 51  VSEFNSHSYATSLQSCIQ-NDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD 109
           + + + H ++ +    +Q    L+    +H  V+  G     F    LLN+      +  
Sbjct: 3   IKQHHKHPHSPAYNLLLQAGPRLKLLHQVHAHVIVSGYGCSRFLLTKLLNLACAAGSISY 62

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQF-VEAVGLFSTLHREGHELNPFAFTAFLKVLV 168
             ++F  +P  ++  F + I+  +    F V ++  ++ +       + + FT+ +K   
Sbjct: 63  TRQIFLIVPNPDSFLFTSLIRSTSKFHNFSVYSLYFYTRMVLSNVAPSNYTFTSVIKSCA 122

Query: 169 SMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------- 219
            +        +   V   G  S+ +V TAL+  +  CG +  ARKVFD +          
Sbjct: 123 DLVALRHGRIIHGHVLVNGFGSDVYVQTALMSFYGKCGVLCNARKVFDKMRDRSVVTWNS 182

Query: 220 -------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC 272
                  N   +EA+  F +M+ +G +PN+ TF  VL AC  L    +    H  A+   
Sbjct: 183 MISGYEQNGFAKEAIRLFDRMKEIGVEPNSATFVSVLSACAHLGAFILGCWVHEYAVGNG 242

Query: 273 YEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFC 332
            ++++ +  +L+++YT+ G +S AR +F+ M +++V+ W+ MI+ Y        AVELF 
Sbjct: 243 LDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFH 302

Query: 333 RMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI-HSLVVRVGLLSDVFVSNALMDVYAKC 391
            MR+  + PN  TFV+VL ACA    ++ G ++  S+     L+ +V     L+D+  + 
Sbjct: 303 EMRRNGLLPNSITFVAVLSACAHAGLVNEGRRVFESMREEYRLVPEVEHHVCLVDMLGRA 362

Query: 392 GRMENSVELFAE 403
           G ++ +     E
Sbjct: 363 GLLDEAYNFIKE 374



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 103/428 (24%), Positives = 178/428 (41%), Gaps = 77/428 (17%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +++++ + ++SC     L+    IH  VL  G   D++    L++ Y K   L +A K+F
Sbjct: 110 SNYTFTSVIKSCADLVALRHGRIIHGHVLVNGFGSDVYVQTALMSFYGKCGVLCNARKVF 169

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D+M +R+ +++ + I GY  +    EA+ LF  +   G E N   F + L     +G   
Sbjct: 170 DKMRDRSVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVEPNSATFVSVLSACAHLGAFI 229

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------- 218
           L   V       G D N  +GT+LI+ ++ CG V  AR+VFD +                
Sbjct: 230 LGCWVHEYAVGNGLDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVAWTAMISGYG 289

Query: 219 FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            N    +A+  F +MR  G  PN+ TF  VL AC           AH             
Sbjct: 290 TNGYGSQAVELFHEMRRNGLLPNSITFVAVLSAC-----------AH------------- 325

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKK-DVIP-------WSFMIARYAQTDLSIDAVEL 330
                      +G ++  RR+FE M ++  ++P          M+ R    D      E 
Sbjct: 326 -----------AGLVNEGRRVFESMREEYRLVPEVEHHVCLVDMLGRAGLLD------EA 368

Query: 331 FCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI--HSLVVRVGLLSDVFVSNALMDVY 388
           +  +++    P    + ++L AC   +   LG Q+  H L    G  +   +   L ++Y
Sbjct: 369 YNFIKEIHEEPAPAIWTAMLGACKMHKNFGLGAQVAEHRLASEPGNPAHYVI---LSNIY 425

Query: 389 AKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTY- 447
           A  GRM+  VE+  ++  R  +      VGY  + ++ +   +FS   +      E+ + 
Sbjct: 426 ALAGRMDQ-VEMVRDNMIRKCLKKQ---VGYSTI-DLDRKTYLFSMGDKSHTETNEIYHY 480

Query: 448 -SSVLRAC 454
              ++R C
Sbjct: 481 LDQLMRKC 488


>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g08820
 gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
 gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
 gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 685

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 215/597 (36%), Positives = 334/597 (55%), Gaps = 11/597 (1%)

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           N  F E L+ F  +R  G   + FTF  VLKAC    + ++    H   +K  +  D+  
Sbjct: 89  NHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAA 148

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
             +LL +Y+ SG +++A ++F+E+P + V+ W+ + + Y  +    +A++LF +M +  V
Sbjct: 149 MTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGV 208

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
            P+ +  V VL AC  +  LD G  I   +  + +  + FV   L+++YAKCG+ME +  
Sbjct: 209 KPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARS 268

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +F    +++ VTW+TMI GY       + + +F +ML+E +   + +    L +CASL A
Sbjct: 269 VFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGA 328

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
           L+ G     L  +  +  ++ +ANALIDMYAKCG++     VF  M + + V  NA ISG
Sbjct: 329 LDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISG 388

Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
            + +G       VF   ++ G  P+  TF+G+L  C + GL++ G  +F ++   Y ++ 
Sbjct: 389 LAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKR 448

Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHI 639
            +EHY  MV L GRAG LD A +LI  +P +P+ ++W ALL  C +  + ++     + +
Sbjct: 449 TVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKEL 508

Query: 640 LDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAG 688
           +  EP +   +V LSNIY++   W++AA            K PG SWIE +G VH F A 
Sbjct: 509 IALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLAD 568

Query: 689 DTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALF 748
           D SH   + I   LE L  + R  G++P    V  DV E+EKER L  HSEKLA+A  L 
Sbjct: 569 DKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLI 628

Query: 749 KMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
                  IR++KNLR+C DCH  +K+ISKI +REI++RD +RFH F +G CSC D+W
Sbjct: 629 STDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 142/527 (26%), Positives = 251/527 (47%), Gaps = 36/527 (6%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           IH  ++      D F  N+LL   +   +   +  LF      N   + + I G+  +  
Sbjct: 32  IHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHL 91

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
           F E + LF ++ + G  L+ F F   LK        +L   + + V K G + +    T+
Sbjct: 92  FHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTS 151

Query: 198 LIDAFSVCGCVEFARKVFD-----------GLFNDC-----FEEALNFFSQMRAVGFKPN 241
           L+  +S  G +  A K+FD            LF+         EA++ F +M  +G KP+
Sbjct: 152 LLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPD 211

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL----YVAVALLDLYTKSGEISNAR 297
           ++    VL AC+ +  +   +      +K   EM++    +V   L++LY K G++  AR
Sbjct: 212 SYFIVQVLSACVHVGDLDSGE----WIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKAR 267

Query: 298 RIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATME 357
            +F+ M +KD++ WS MI  YA      + +ELF +M Q  + P+QF+ V  L +CA++ 
Sbjct: 268 SVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLG 327

Query: 358 GLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIV 417
            LDLG    SL+ R   L+++F++NAL+D+YAKCG M    E+F E  +++ V  N  I 
Sbjct: 328 ALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAIS 387

Query: 418 GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM 477
           G  + G V  +  +F +  +  +     T+  +L  C     ++ G++     +   Y +
Sbjct: 388 GLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFN-AISCVYAL 446

Query: 478 DVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSM---HGLSAEVLK 531
              V +   ++D++ + G + DA RL+ DM    N + W A++SG  +     L+  VLK
Sbjct: 447 KRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLK 506

Query: 532 VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
             +L+    W   N  +V + +  S GG  ++  A  + M+   G++
Sbjct: 507 --ELIALEPWNAGN--YVQLSNIYSVGGRWDEA-AEVRDMMNKKGMK 548



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 93/382 (24%), Positives = 179/382 (46%), Gaps = 24/382 (6%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           ++   L++C +    +  + +H  V+K G   D+ A   LL++Y    RL DA KLFDE+
Sbjct: 113 TFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEI 172

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
           P+R+ +++     GYT S +  EA+ LF  +   G + + +     L   V +G  +   
Sbjct: 173 PDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGE 232

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------ND 221
            +   + ++    N+FV T L++ ++ CG +E AR VFD +                 N 
Sbjct: 233 WIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNS 292

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
             +E +  F QM     KP+ F+    L +C  L  + + +       +  +  +L++A 
Sbjct: 293 FPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMAN 352

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           AL+D+Y K G ++    +F+EM +KD++  +  I+  A+      +  +F +  +  ++P
Sbjct: 353 ALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISP 412

Query: 342 NQFTFVSVLQACA----TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
           +  TF+ +L  C       +GL   N I  +     L   V     ++D++ + G ++++
Sbjct: 413 DGSTFLGLLCGCVHAGLIQDGLRFFNAISCV---YALKRTVEHYGCMVDLWGRAGMLDDA 469

Query: 398 VELFAESPKR-NHVTWNTMIVG 418
             L  + P R N + W  ++ G
Sbjct: 470 YRLICDMPMRPNAIVWGALLSG 491


>gi|356528130|ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Glycine max]
          Length = 674

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 227/642 (35%), Positives = 355/642 (55%), Gaps = 50/642 (7%)

Query: 206 GCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAH 265
           G  +FA     G   + FE   +F S++ A   +P    F+ +L+AC+ L ++ + K  H
Sbjct: 41  GNEQFATLCSKGHIREAFE---SFLSEIWA---EPR--LFSNLLQACIPLKSVSLGKQLH 92

Query: 266 GCALKTCYEMDLYVAVALLDLYTKSGEIS------------------------------- 294
                +    D +++  LL+LY+K GE+                                
Sbjct: 93  SLIFTSGCSSDKFISNHLLNLYSKFGELQAAVALFDRMPRRNIMSCNIMIKAYLGMGNLE 152

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
           +A+ +F+EMP ++V  W+ M+    + +++ +A+ LF RM +    P++++  SVL+ CA
Sbjct: 153 SAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSRMNELSFMPDEYSLGSVLRGCA 212

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
            +  L  G Q+H+ V++ G   ++ V  +L  +Y K G M +   +    P  + V WNT
Sbjct: 213 HLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGSMHDGERVINWMPDCSLVAWNT 272

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
           ++ G  Q G     +  +  M        ++T+ SV+ +C+ LA L  G Q+H   VKA 
Sbjct: 273 LMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVISSCSELAILCQGKQIHAEAVKAG 332

Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
              +V V ++L+ MY++CG + D+   F    + + V W++MI+ Y  HG   E +K+F+
Sbjct: 333 ASSEVSVVSSLVSMYSRCGCLQDSIKTFLECKERDVVLWSSMIAAYGFHGQGEEAIKLFN 392

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
            M+Q     N +TF+ +L ACS+ GL ++G   F  MV  YG++  ++HYT +V LLGR+
Sbjct: 393 EMEQENLPGNEITFLSLLYACSHCGLKDKGLGLFDMMVKKYGLKARLQHYTCLVDLLGRS 452

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLS 654
           G L++A  +I  +P +   +IW+ LL AC IH N EI R  A  +L  +P+D A++VLL+
Sbjct: 453 GCLEEAEAMIRSMPVKADAIIWKTLLSACKIHKNAEIARRVADEVLRIDPQDSASYVLLA 512

Query: 655 NIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLE 703
           NIY+ A  W+           K   KEPG+SW+E +  VH F  GD  H     I   LE
Sbjct: 513 NIYSSANRWQNVSEVRRAMKDKMVKKEPGISWVEVKNQVHQFHMGDECHPKHVEINQYLE 572

Query: 704 WLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLR 763
            L  + ++ GY+PD S+VL D+  +EKE+ L  HSEKLA+AFAL   P   PIR++KNLR
Sbjct: 573 ELTSEIKRQGYVPDTSSVLHDMDNEEKEQILRHHSEKLAIAFALMNTPEGVPIRVMKNLR 632

Query: 764 ICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +C DCH AIK IS+I + EII+RD  RFHHF++G CSCGD+W
Sbjct: 633 VCSDCHVAIKYISEIKKLEIIVRDSSRFHHFKNGTCSCGDYW 674



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 102/408 (25%), Positives = 179/408 (43%), Gaps = 51/408 (12%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKL----------NRLP 108
           ++  LQ+CI    +     +H  +   G   D F +N LLN+Y K           +R+P
Sbjct: 72  FSNLLQACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHLLNLYSKFGELQAAVALFDRMP 131

Query: 109 ---------------------DATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFST 147
                                 A  LFDEMP+RN  ++   + G T      EA+ LFS 
Sbjct: 132 RRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSR 191

Query: 148 LHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGC 207
           ++      + ++  + L+    +G       V A V K G + N  VG +L   +   G 
Sbjct: 192 MNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGS 251

Query: 208 VEFARKVFDGLFNDC-----------------FEEALNFFSQMRAVGFKPNNFTFAFVLK 250
           +    +V + +  DC                 FE  L+ +  M+  GF+P+  TF  V+ 
Sbjct: 252 MHDGERVINWM-PDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVIS 310

Query: 251 ACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIP 310
           +C  L  +   K  H  A+K     ++ V  +L+ +Y++ G + ++ + F E  ++DV+ 
Sbjct: 311 SCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLECKERDVVL 370

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV 370
           WS MIA Y       +A++LF  M Q  +  N+ TF+S+L AC+     D G  +  ++V
Sbjct: 371 WSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKGLGLFDMMV 430

Query: 371 -RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMI 416
            + GL + +     L+D+  + G +E +  +    P K + + W T++
Sbjct: 431 KKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLL 478



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/292 (23%), Positives = 118/292 (40%), Gaps = 42/292 (14%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           + +S  + L+ C     L     +H  V+K G   +L     L ++Y+K   + D  ++ 
Sbjct: 200 DEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGSMHDGERVI 259

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           + MP+ + +++ T + G      F   +  +  +   G   +   F + +     +  A 
Sbjct: 260 NWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVISSCSEL--AI 317

Query: 175 LCPC--VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF------DGL-------- 218
           LC    + A   K G  S   V ++L+  +S CGC++ + K F      D +        
Sbjct: 318 LCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLECKERDVVLWSSMIAA 377

Query: 219 --FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKAC---------LGLDTIRVAKSAHGC 267
             F+   EEA+  F++M       N  TF  +L AC         LGL  + V K     
Sbjct: 378 YGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKGLGLFDMMVKKYGLKA 437

Query: 268 ALK--TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
            L+  TC          L+DL  +SG +  A  +   MP K D I W  +++
Sbjct: 438 RLQHYTC----------LVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLS 479



 Score = 43.1 bits (100), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 56/252 (22%), Positives = 100/252 (39%), Gaps = 20/252 (7%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           ++ + + SC +   L     IH + +K G   ++   + L+++Y +   L D+ K F E 
Sbjct: 304 TFVSVISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLEC 363

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
            ER+ + + + I  Y    Q  EA+ LF+ + +E    N   F + L      G  +   
Sbjct: 364 KERDVVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKGL 423

Query: 178 CVF-ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAV 236
            +F   V K G  +     T L+D     GC+E A             EA+     +R++
Sbjct: 424 GLFDMMVKKYGLKARLQHYTCLVDLLGRSGCLEEA-------------EAM-----IRSM 465

Query: 237 GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNA 296
             K +   +  +L AC       +A+      L+     D    V L ++Y+ +    N 
Sbjct: 466 PVKADAIIWKTLLSACKIHKNAEIARRVADEVLRI-DPQDSASYVLLANIYSSANRWQNV 524

Query: 297 RRIFEEMPKKDV 308
             +   M  K V
Sbjct: 525 SEVRRAMKDKMV 536


>gi|115461454|ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group]
 gi|38345824|emb|CAE01858.2| OSJNBa0070M12.7 [Oryza sativa Japonica Group]
 gi|113565898|dbj|BAF16241.1| Os04g0686500 [Oryza sativa Japonica Group]
 gi|215766744|dbj|BAG98972.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222629815|gb|EEE61947.1| hypothetical protein OsJ_16704 [Oryza sativa Japonica Group]
          Length = 690

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 239/667 (35%), Positives = 359/667 (53%), Gaps = 42/667 (6%)

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG----------------LFNDC 222
           + A + KLG  S+  +   LID ++ CG +  A +VFDG                L +  
Sbjct: 26  LHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGE 85

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
             E L  F +MR  G  PN FT +  LKAC G    R     HG  ++T +E    VA +
Sbjct: 86  ARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRAGVQIHGVCVRTGFEGHDVVANS 143

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM-RQAFVAP 341
           L+ +Y+K     +ARR+F+ +P +++  W+ MI+ YA      D++ +F  M R+    P
Sbjct: 144 LVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQP 203

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHS-LVVR-VGLLSDVFVSNALMDVYAKCGRMENSVE 399
           ++FTF S+L+AC+ +     G Q+H+ + VR V   S+  ++ AL+DVY KC R+  +++
Sbjct: 204 DEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQ 263

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +F    +RN + W T+IVG+ Q G+V +AM +F +     V A     SSV+   A  A 
Sbjct: 264 VFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFAL 323

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
           +E G QVHC T K    +DV VAN+L+DMY KCG   +A   F  M   N VSW AMI+G
Sbjct: 324 VEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMING 383

Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
              HG   E + +F+ MQ+ G   + + ++ +LSACS+ GL+++   YF  +  +  + P
Sbjct: 384 VGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRP 443

Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHI 639
             EHY  MV LLGRAG L +A +LI  +P +P+V +W+ LL AC +H +V +GR     +
Sbjct: 444 KAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDVL 503

Query: 640 LDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYF-RA 687
           L  + ++   +V+LSNI A A  W            K   K+ G SW E    VH+F   
Sbjct: 504 LAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDKEVHFFYGG 563

Query: 688 GDTSHADMNIIRGMLEWLNMKSR-KAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFA 746
           GD +H     IR  L  +  + R + GY  D    L DV E+ +   L  HSE+LA+   
Sbjct: 564 GDDAHPQAGDIRRALREVEARMRERLGYSGDARCALHDVDEESRVESLREHSERLAVGLW 623

Query: 747 LFKMPPSSP--------IRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGC 798
           L +              +R+ KNLR+C DCH  +K +S +V+R +++RD +RFH FQ+G 
Sbjct: 624 LLRDGTGDDGGGGGGEVVRVYKNLRVCGDCHEFLKGLSAVVRRVVVVRDANRFHRFQNGA 683

Query: 799 CSCGDFW 805
           CSC D+W
Sbjct: 684 CSCRDYW 690



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 133/503 (26%), Positives = 227/503 (45%), Gaps = 33/503 (6%)

Query: 60  ATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPE 119
           A  L++  +   L+  + +H  ++K G   D    N L+++Y K  +L  A ++FD MPE
Sbjct: 8   ADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPE 67

Query: 120 RNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCV 179
           RN +S+   + G+    +  E + LF  +   G   N F  +A LK     G       +
Sbjct: 68  RNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLK--ACGGGTRAGVQI 125

Query: 180 FACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-------GLFNDCF--------- 223
                + G + +  V  +L+  +S       AR+VFD         +N            
Sbjct: 126 HGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQG 185

Query: 224 EEALNFFSQM-RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGC-ALKTCYEM-DLYVA 280
            ++L  F +M R    +P+ FTFA +LKAC GL   R     H   A++      +  +A
Sbjct: 186 RDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILA 245

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
            ALLD+Y K   +  A ++F+ + +++ I W+ +I  +AQ     +A+ LF R   + V 
Sbjct: 246 GALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVR 305

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
            +     SV+   A    ++ G Q+H    +     DV V+N+L+D+Y KCG    +   
Sbjct: 306 ADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRR 365

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F E P RN V+W  MI G  + G   +A+ +F +M EE V A EV Y ++L AC+     
Sbjct: 366 FREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSACS----- 420

Query: 461 EPGMQVHCLTVKANYDMDVVVANA------LIDMYAKCGSITDAR-LVFDMMNDWNEVSW 513
             G+   C    +    D  +         ++D+  + G + +A+ L+  M  +     W
Sbjct: 421 HSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVW 480

Query: 514 NAMISGYSMHGLSAEVLKVFDLM 536
             ++S   +H   A   +V D++
Sbjct: 481 QTLLSACRVHKDVAVGREVGDVL 503



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 198/389 (50%), Gaps = 11/389 (2%)

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
            A +L+A     ++R     H   +K  +  D  +   L+D+Y K G++  A  +F+ MP
Sbjct: 7   IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMP 66

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
           +++V+ W+ ++  +     + + + LF  MR +  +PN+FT  + L+AC    G   G Q
Sbjct: 67  ERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRAGVQ 124

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
           IH + VR G      V+N+L+ +Y+K     ++  +F   P RN  TWN+MI GY   G+
Sbjct: 125 IHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQ 184

Query: 425 VGKAMIMFSKMLE--EQVPATEVTYSSVLRACASLAALEPGMQVH-CLTVKA-NYDMDVV 480
              ++++F +M    ++ P  E T++S+L+AC+ L A   G QVH  + V+  +   + +
Sbjct: 185 GRDSLLVFREMQRRHDEQP-DEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAI 243

Query: 481 VANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG 540
           +A AL+D+Y KC  +  A  VFD +   N + W  +I G++  G   E + +F      G
Sbjct: 244 LAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSG 303

Query: 541 WRPNNLTFVGVLSACSNGGLLEQG-EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDK 599
            R +      V++  ++  L+EQG + +  +     G++  + +  S+V +  + G   +
Sbjct: 304 VRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVAN--SLVDMYLKCGLTGE 361

Query: 600 AAKLIEGIPFQPSVMIWRALLGACIIHNN 628
           A +    +P + +V+ W A++     H +
Sbjct: 362 AGRRFREMPAR-NVVSWTAMINGVGKHGH 389


>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
          Length = 1072

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 253/777 (32%), Positives = 406/777 (52%), Gaps = 75/777 (9%)

Query: 54   FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
             NS    TS + C  +    T   +H  +   G      A+  L+  Y ++     + ++
Sbjct: 346  LNSSRSLTSHKRCATS---TTLTQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRV 402

Query: 114  FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTL-HREGHELNPFAFTAFLKVLVSMGW 172
            FD  P+ ++  +   I+ Y     F EAV L+  + +++  +++ F F + LK     G 
Sbjct: 403  FDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFG- 461

Query: 173  AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQ 232
                                          SV G             N    E L+ FSQ
Sbjct: 462  ----------------------------DLSVGGK------------NGQASEGLDMFSQ 481

Query: 233  MRAVGFKPNNFTFAFVLKACLGLDTIRVAK--------SAHGCALKTCYEMDL-YVAVAL 283
            M +   +P++ T   V +AC  L ++R+ +        S HG  ++   + +L ++  AL
Sbjct: 482  MISEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDPELDFLGPAL 541

Query: 284  LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
            ++LY  +G + +  ++FE + +K ++ W+ +I+ + +     +A+ LF +M+   + P+ 
Sbjct: 542  MELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDS 601

Query: 344  FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
            ++  S L AC T+    LG QIH  +++ G  +D FV NAL+D+YAKCG + ++ ++F +
Sbjct: 602  YSLASSLSACGTISFSQLGAQIHGYIIKTGNFND-FVQNALIDMYAKCGFVHSANKMFEK 660

Query: 404  SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
              +++ VTWN+MI G+ Q G   +A+ +F +M    V   ++T+ SV++AC+ L  LE G
Sbjct: 661  IKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKG 720

Query: 464  MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMH 523
              VH   +      D  +  AL DMY+KCG +  A  VFD M++ + VSW+ MI+GY MH
Sbjct: 721  KWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMH 780

Query: 524  GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEH 583
            G     + +F+ M   G +PN++TF+ +LSACS+ G +E+G+ YF SM + +G+EP  +H
Sbjct: 781  GQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSM-SEFGVEPKHDH 839

Query: 584  YTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFE 643
            +  MV LL RAG L+ A ++I  +PF  +  IW ALL  C IH  ++I +   +++LD +
Sbjct: 840  FACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVD 899

Query: 644  PEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSH 692
              D   + LLSNIYA   +W+           K   K PG S IE    ++ F  GDTSH
Sbjct: 900  TADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSH 959

Query: 693  ADMNIIRGMLEWLNMKSRKAGYI----PDLSAVLRDVREDEKERYLWVHSEKLALAFALF 748
            +    I   LE  N +S     +    PD S V     +  KE  +  HSEKLA+AF + 
Sbjct: 960  SQTKDIYRFLE--NFRSLVHAQVYDSEPDNSIV--GTSKFNKENNVVSHSEKLAIAFGII 1015

Query: 749  KMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
               P + +RI KNLR+C DCH+  KI SKI  REII+RD++RFH F++G CSC D+W
Sbjct: 1016 NTRPGTTLRISKNLRVCRDCHSFAKIASKITGREIIMRDLNRFHCFRNGSCSCNDYW 1072


>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 689

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 224/615 (36%), Positives = 339/615 (55%), Gaps = 49/615 (7%)

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           P+  ++A + +     + I++ + AH   +    + + ++A  ++ +Y  SG++ +A  +
Sbjct: 75  PHPSSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVV 134

Query: 300 FEEMPKKDVIPWSFMI---ARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM 356
           F+ +     + ++ +I    R+         +E + RM    +  + FT   VL++CA +
Sbjct: 135 FDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADL 194

Query: 357 EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMI 416
             + +G  +H   +RVGL  D +V  +L+D+Y KCG + ++ +LF +   R+  +WN +I
Sbjct: 195 SRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALI 254

Query: 417 VGYVQLGEVG-------------------------------KAMIMFSKMLEE--QVPAT 443
            GY++ GE+G                               +A+ +F +ML++  ++   
Sbjct: 255 AGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPN 314

Query: 444 EVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFD 503
            VT  SVL ACA  AALE G ++H         ++  V  AL  MYAKC S+ +AR  FD
Sbjct: 315 WVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFD 374

Query: 504 MM--NDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLL 561
           M+  N  N ++WN MI+ Y+ HG   E + +F+ M + G +P+ +TF+G+LS CS+ GL+
Sbjct: 375 MIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLI 434

Query: 562 EQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLG 621
           + G  +F  M   + +EP +EHY  +V LLGRAG L +A +LI  +P Q    +W ALL 
Sbjct: 435 DAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLA 494

Query: 622 ACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKE 670
           AC  H N+EI  L+A+ +   EP++   +VLLSN+YA A  WE           +   K 
Sbjct: 495 ACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKS 554

Query: 671 PGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEK 730
           PG SWIE  G  H F   D SH     I   LE L  K + AGYIPD S VL D+ E+EK
Sbjct: 555 PGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFVLHDISEEEK 614

Query: 731 ERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHR 790
           E  L  HSEKLA+AF L    P   +R+ KNLRIC DCH A K ISKI +REII+RD++R
Sbjct: 615 EYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRICGDCHAATKFISKIYEREIIVRDLNR 674

Query: 791 FHHFQDGCCSCGDFW 805
           FH F+DG CSCGD+W
Sbjct: 675 FHCFKDGSCSCGDYW 689



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 109/429 (25%), Positives = 187/429 (43%), Gaps = 60/429 (13%)

Query: 153 HELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFAR 212
           H  +P ++    + L    + +L     A +   G   NAF+   ++  ++  G ++ A 
Sbjct: 73  HFPHPSSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAV 132

Query: 213 KVFDG-------LFNDCFEE------------ALNFFSQMRAVGFKPNNFTFAFVLKACL 253
            VFD        L+N                  L  +++M  +G   +NFT  FVLK+C 
Sbjct: 133 VVFDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCA 192

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR--------------- 298
            L  + + +  HG  L+   E D YV  +L+D+Y K G I +AR+               
Sbjct: 193 DLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNA 252

Query: 299 ----------------IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ--AFVA 340
                           +FE M  ++++ W+ MI+ Y Q   +  A+ LF  M Q  + + 
Sbjct: 253 LIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMK 312

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS--- 397
           PN  T VSVL ACA    L+ G +IH     +GL  +  V  AL  +YAKC  +  +   
Sbjct: 313 PNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCC 372

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
            ++ A++ K N + WNTMI  Y   G   +A+ +F  ML   V    VT+  +L  C+  
Sbjct: 373 FDMIAQNGK-NLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHS 431

Query: 458 AALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDAR-LVFDMMNDWNEVSWN 514
             ++ G+  H   +   + ++  V +   ++D+  + G + +A+ L+  M        W 
Sbjct: 432 GLIDAGLN-HFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWG 490

Query: 515 AMISGYSMH 523
           A+++    H
Sbjct: 491 ALLAACRSH 499



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 95/409 (23%), Positives = 163/409 (39%), Gaps = 67/409 (16%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           SYA   Q   +++ ++     H Q++  G   + F    ++ +Y     L  A  +FD +
Sbjct: 79  SYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRI 138

Query: 118 PERNTISFVTTIQGYT---VSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
              +++ + + I+ YT           +  ++ +H  G   + F     LK    +    
Sbjct: 139 DNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVC 198

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD------------------ 216
           +  CV     ++G + + +VG +LID +  CG +  ARK+FD                  
Sbjct: 199 MGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYM 258

Query: 217 -----GLFNDCF------------------------EEALNFFSQMRAVG--FKPNNFTF 245
                G+  D F                        E+AL  F +M   G   KPN  T 
Sbjct: 259 KEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTI 318

Query: 246 AFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPK 305
             VL AC     +   +  H  A      ++  V  AL  +Y K   +  AR  F+ + +
Sbjct: 319 VSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQ 378

Query: 306 --KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG- 362
             K++I W+ MI  YA     ++AV +F  M +A V P+  TF+ +L  C+    +D G 
Sbjct: 379 NGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGL 438

Query: 363 ------NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
                   IHS+  RV   + V      +D+  + GR+  + EL ++ P
Sbjct: 439 NHFNDMGTIHSVEPRVEHYACV------VDLLGRAGRLVEAKELISQMP 481


>gi|414867972|tpg|DAA46529.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 993

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 242/767 (31%), Positives = 393/767 (51%), Gaps = 33/767 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N+++ AT +  C   +D    + +   V+  G    +   N L+ ++  L R+ DA +LF
Sbjct: 144 NANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLF 203

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFT--AFLKVLVSMGW 172
           D M ER+ IS+   I  Y+    + +   + S + R G E+ P   T  + + V  S   
Sbjct: 204 DRMEERDRISWNAMISMYSHEEVYSKCFIVLSDM-RHG-EVKPDVTTLCSLVSVCASSDL 261

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------------- 219
             L   + +     G   +  +  AL++ +S  G ++ A  +F  +              
Sbjct: 262 VALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISS 321

Query: 220 ----NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
               N C E        ++     PN+ TF+  L AC   + +   ++ H   L+   + 
Sbjct: 322 YVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQN 381

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
            L +  +LL +Y+K   + +  R+FE MP  DV+  + +   YA  +   +A+ +F  MR
Sbjct: 382 VLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMR 441

Query: 336 QAFVAPNQFTFVSVLQACATMEGL-DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
              + PN  T +++   C ++  L   G  +H+ V + GLLSD +++N+L+ +YA CG +
Sbjct: 442 GTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDL 501

Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
           E+S  +F+    ++ ++WN +I   V+ G   +A+ +F               +  L + 
Sbjct: 502 ESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSS 561

Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
           A+LA+LE GMQ+H L+VK   D D  V NA +DMY KCG +                 WN
Sbjct: 562 ANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWN 621

Query: 515 AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
            +ISGY+ +G   E    F  M   G +P+ +TFV +LSACS+ GL+++G  Y+ SM   
Sbjct: 622 TLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKGMDYYNSMAPT 681

Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL 634
           +G+ P I+H   +V LLGR G   +A K I+ +P  P+ +IWR+LL +   H N++IGR 
Sbjct: 682 FGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSLLSSSRTHKNLDIGRK 741

Query: 635 SAQHILDFEPEDEATHVLLSNIYAMARSW---EKAAS--------KEPGLSWIENQGMVH 683
           +A+++L+ +P D++ +VLLSN+YA    W   +K  S        K P  SW++ +  V 
Sbjct: 742 AAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTIKLNKRPACSWLKLKNEVS 801

Query: 684 YFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLAL 743
            F  GD SH     I   L+ + +K R+ GY+ D S+ L D  E++KE  LW HSEKLAL
Sbjct: 802 TFGIGDRSHMHAEKIYVKLDEILLKLREVGYVADTSSALHDTDEEQKEHNLWNHSEKLAL 861

Query: 744 AFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHR 790
           A+ L  +P  S IRI KNLR+C DCH   K++S +  REI++RD +R
Sbjct: 862 AYGLLVVPEGSTIRIFKNLRVCADCHLVFKLVSMVFHREIVLRDPYR 908



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 143/562 (25%), Positives = 261/562 (46%), Gaps = 22/562 (3%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           IH    + G   +++    LL++Y     + +A +LF EMP+RN +S+   +   + +  
Sbjct: 66  IHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGC 125

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
             EA+  +  + +EG   N  A    + +  ++        V A V   G  ++  V  +
Sbjct: 126 MEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANS 185

Query: 198 LIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPN 241
           LI  F     V+ A ++FD +                  + + +     S MR    KP+
Sbjct: 186 LITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPD 245

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
             T   ++  C   D + +    H   + +     + +  AL+++Y+ +G++  A  +F 
Sbjct: 246 VTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFR 305

Query: 302 EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA-PNQFTFVSVLQACATMEGLD 360
            M ++DVI W+ MI+ Y Q++  ++A+E   ++ Q     PN  TF S L AC++ E L 
Sbjct: 306 NMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALM 365

Query: 361 LGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYV 420
            G  IH+++++  L + + + N+L+ +Y+KC  ME++  +F   P  + V+ N +  GY 
Sbjct: 366 NGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYA 425

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP-GMQVHCLTVKANYDMDV 479
            L +V  AM +FS M    +    +T  ++   C SL  L   GM +H    +     D 
Sbjct: 426 ALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDE 485

Query: 480 VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
            + N+LI MYA CG +  +  +F  +N+ + +SWNA+I+    HG   E +K+F   Q  
Sbjct: 486 YITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHA 545

Query: 540 GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEH-YTSMVSLLGRAGHLD 598
           G + +       LS+ +N   LE+G       V N G++ C  H   + + + G+ G +D
Sbjct: 546 GNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKN-GLD-CDSHVVNATMDMYGKCGKMD 603

Query: 599 KAAKLIEGIPFQPSVMIWRALL 620
              K +     +P+   W  L+
Sbjct: 604 CMLKTLPDPAHRPT-QCWNTLI 624



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 160/329 (48%), Gaps = 5/329 (1%)

Query: 303 MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC---ATMEGL 359
           MP +    W   ++  A+  L   A  L   MR+  V  + F   S++ AC      EG 
Sbjct: 1   MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60

Query: 360 DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGY 419
             G  IH+L  R GL+ +V++  AL+ +Y   G + N+  LF E P+RN V+W  ++V  
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVAL 120

Query: 420 VQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDV 479
              G + +A++ + +M +E V       ++V+  C +L     G+QV    V +     V
Sbjct: 121 SSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHV 180

Query: 480 VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
            VAN+LI M+     + DA  +FD M + + +SWNAMIS YS   + ++   V   M+  
Sbjct: 181 SVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHG 240

Query: 540 GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDK 599
             +P+  T   ++S C++  L+  G     S+  + G+   +    ++V++   AG LD+
Sbjct: 241 EVKPDVTTLCSLVSVCASSDLVALGSG-IHSLCVSSGLHCSVPLINALVNMYSTAGKLDE 299

Query: 600 AAKLIEGIPFQPSVMIWRALLGACIIHNN 628
           A  L   +  +  V+ W  ++ + +  N+
Sbjct: 300 AESLFRNMS-RRDVISWNTMISSYVQSNS 327


>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 775

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 235/664 (35%), Positives = 357/664 (53%), Gaps = 68/664 (10%)

Query: 187 GHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFA 246
           G D + +V   L++ ++VCG V  AR+VF+          L+  S          N   A
Sbjct: 135 GFDGDVYVRNTLMNLYAVCGSVGSARRVFEE------SPVLDLVSW---------NTLLA 179

Query: 247 FVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-- 304
             ++A    +  RV         +   E +   + +++ L+ + G +  ARRIF  +   
Sbjct: 180 GYVQAGEVEEAERV--------FEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGR 231

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
           ++D++ WS M++ Y Q ++  +A+ LF  M+ + VA ++   VS L AC+ +  +++G  
Sbjct: 232 ERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRW 291

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYA--------------------------------KCG 392
           +H L V+VG+   V + NAL+ +Y+                                +CG
Sbjct: 292 VHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCG 351

Query: 393 RMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLR 452
            ++++  LF   P+++ V+W+ MI GY Q     +A+ +F +M    V   E    S + 
Sbjct: 352 SIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAIS 411

Query: 453 ACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS 512
           AC  LA L+ G  +H    +    ++V+++  LIDMY KCG + +A  VF  M +    +
Sbjct: 412 ACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVST 471

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
           WNA+I G +M+G   + L +F  M++ G  PN +TF+GVL AC + GL+  G  YF SM+
Sbjct: 472 WNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMI 531

Query: 573 ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIG 632
             + IE  I+HY  MV LLGRAG L +A +LI+ +P  P V  W ALLGAC  H + E+G
Sbjct: 532 HEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEMG 591

Query: 633 RLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGM 681
               + ++  +P+ +  HVLLSNIYA   +W           +    K PG S IE  G 
Sbjct: 592 ERLGRKLIQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGCSMIEANGT 651

Query: 682 VHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKL 741
           VH F AGD +H  +N I  ML+ +  K +  GY+P  S V  D+ E+EKE  L+ HSEKL
Sbjct: 652 VHEFLAGDKTHPQINDIEHMLDVVAAKLKIEGYVPTTSEVSLDIDEEEKETALFRHSEKL 711

Query: 742 ALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSC 801
           A+AF L  + P +PIR+ KNLRIC DCHT +K+ISK   R+I++RD HRFHHF+ G CSC
Sbjct: 712 AVAFGLITISPPTPIRVTKNLRICNDCHTVVKLISKAFDRDIVVRDRHRFHHFKHGACSC 771

Query: 802 GDFW 805
            DFW
Sbjct: 772 MDFW 775



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 134/525 (25%), Positives = 227/525 (43%), Gaps = 99/525 (18%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +S++Y   LQ C           +H   +  G   D++  N L+N+Y     +  A ++F
Sbjct: 104 DSYTYPILLQCCAARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVF 163

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           +E P  + +S+ T + GY  + +  EA  +F  +        P                 
Sbjct: 164 EESPVLDLVSWNTLLAGYVQAGEVEEAERVFEGM--------P----------------- 198

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
                         + N     ++I  F   GCVE AR++F+G+                
Sbjct: 199 --------------ERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSC 244

Query: 220 ---NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
              N+  EEAL  F +M+  G   +       L AC  +  + + +  HG A+K   E  
Sbjct: 245 YEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDY 304

Query: 277 LYVAVALLDLYTKSGEISNARRIFEE--------------------------------MP 304
           + +  AL+ LY+  GEI +ARRIF++                                MP
Sbjct: 305 VSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMP 364

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
           +KDV+ WS MI+ YAQ +   +A+ LF  M+   V P++   VS + AC  +  LDLG  
Sbjct: 365 EKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKW 424

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
           IH+ + R  L  +V +S  L+D+Y KCG +EN++E+F    ++   TWN +I+G    G 
Sbjct: 425 IHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGS 484

Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ-----VHCLTVKANYDMDV 479
           V +++ MF+ M +      E+T+  VL AC  +  +  G       +H   ++AN    +
Sbjct: 485 VEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEAN----I 540

Query: 480 VVANALIDMYAKCGSITDARLVFDMMNDWNEV-SWNAMISGYSMH 523
                ++D+  + G + +A  + D M    +V +W A++     H
Sbjct: 541 KHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKH 585



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 113/441 (25%), Positives = 203/441 (46%), Gaps = 77/441 (17%)

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           +AL  +    A   KP+++T+  +L+ C    +    +  H  A+ + ++ D+YV   L+
Sbjct: 88  QALLHYKLFLASHAKPDSYTYPILLQCCAARVSEFEGRQLHAHAVSSGFDGDVYVRNTLM 147

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
           +LY   G + +ARR+FEE P  D++ W+ ++A Y Q     +A  +F             
Sbjct: 148 NLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVEEAERVF------------- 194

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF--A 402
                       EG+   N I               SN+++ ++ + G +E +  +F   
Sbjct: 195 ------------EGMPERNTI--------------ASNSMIALFGRKGCVEKARRIFNGV 228

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVG-KAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
              +R+ V+W+ M+  Y Q  E+G +A+++F +M    V   EV   S L AC+ +  +E
Sbjct: 229 RGRERDMVSWSAMVSCYEQ-NEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVE 287

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND------WNE----- 510
            G  VH L VK   +  V + NALI +Y+ CG I DAR +FD   +      WN      
Sbjct: 288 MGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGY 347

Query: 511 ---------------------VSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFV 549
                                VSW+AMISGY+ H   +E L +F  MQ  G RP+    V
Sbjct: 348 LRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALV 407

Query: 550 GVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF 609
             +SAC++   L+ G+ +  + ++   ++  +   T+++ +  + G ++ A ++   +  
Sbjct: 408 SAISACTHLATLDLGK-WIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAME- 465

Query: 610 QPSVMIWRALLGACIIHNNVE 630
           +  V  W A++    ++ +VE
Sbjct: 466 EKGVSTWNAVILGLAMNGSVE 486



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/353 (24%), Positives = 156/353 (44%), Gaps = 46/353 (13%)

Query: 276 DLYVAVALLDLYTKSGEI---SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFC 332
           D Y A  L++  + S  +     + RIF  +   +   W+ ++  +     S     L  
Sbjct: 34  DPYAASRLINFSSHSTTLVPFHYSLRIFNHLRNPNTFTWNTIMRAHLYLQNSPHQALLHY 93

Query: 333 RMRQAFVA-PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC 391
           ++  A  A P+ +T+  +LQ CA       G Q+H+  V  G   DV+V N LM++YA C
Sbjct: 94  KLFLASHAKPDSYTYPILLQCCAARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVC 153

Query: 392 GRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVL 451
           G + ++  +F ESP  + V+WNT++ GYVQ GEV +A  +F  M E              
Sbjct: 154 GSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVEEAERVFEGMPER------------- 200

Query: 452 RACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMM--NDWN 509
                                     + + +N++I ++ + G +  AR +F+ +   + +
Sbjct: 201 --------------------------NTIASNSMIALFGRKGCVEKARRIFNGVRGRERD 234

Query: 510 EVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFK 569
            VSW+AM+S Y  + +  E L +F  M+  G   + +  V  LSACS    +E G  +  
Sbjct: 235 MVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGR-WVH 293

Query: 570 SMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
            +    G+E  +    +++ L    G +  A ++ +       ++ W +++  
Sbjct: 294 GLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISG 346


>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
 gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
          Length = 713

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 234/650 (36%), Positives = 354/650 (54%), Gaps = 33/650 (5%)

Query: 189 DSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQ 232
           D N F+G  L+DA+S  G +  A+  F  +                 N     A   F  
Sbjct: 64  DRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAAYAQNGHPRGAATLFHW 123

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           M + G +PN  T +  L AC     + + +  +        E+D +V  +L+ +Y +  E
Sbjct: 124 MCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEIDSHVESSLITMYGRCRE 183

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           I  A R F+  P+KDV+ W+ MI+ YA    +  A+EL  RM    +     T+VS+L A
Sbjct: 184 IEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIKLGLPTYVSLLDA 243

Query: 353 CATMEGLDLGNQIHSLVVRVGL-LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
           CA+   L  G   H     +GL  S   V+  L+++Y KCGR++++  +    P R  V+
Sbjct: 244 CASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVS 303

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHC-LT 470
           W  MI  Y Q G   +A+ +F  M  E    +++T  SV+ +CA L  L  G ++H  + 
Sbjct: 304 WTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIR 363

Query: 471 VKANYDMDVVVANALIDMYAKCGSITDARLVFDM--MNDWNEVSWNAMISGYSMHGLSAE 528
              ++   +++ NA+I MY KCG++  AR VF+   +   + V+W AMI  Y+ +G+  E
Sbjct: 364 SSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRAYAQNGVGEE 423

Query: 529 VLKVF-DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSM 587
            +++F +++   G  PN +TF+ VL ACS+ G LEQ   +F SM  ++G+ P  +HY  +
Sbjct: 424 AIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCL 483

Query: 588 VSLLGRAGHLDKAAKLI-EGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPED 646
           V LLGRAG L +A KL+     F+  V+ W A L AC ++ ++E  + +A+ + + EPE+
Sbjct: 484 VDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRVSELEPEN 543

Query: 647 EATHVLLSNIYA-------MARSWEKAAS----KEPGLSWIENQGMVHYFRAGDTSHADM 695
            A  VLLSN+YA       +AR   +  S    K  G SWIE    VH F   D SH   
Sbjct: 544 VAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVHEFMVSDVSHPRK 603

Query: 696 NIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSP 755
             I   LE L+ + ++AGY+PD   VLRDV E++K + L  HSE+LA+A  +   PP + 
Sbjct: 604 LEIYSELERLHREIKEAGYVPDTKMVLRDVDEEKKVQLLGYHSERLAMALGIISTPPGTT 663

Query: 756 IRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +R++KNLR+C DCH A K IS+IV R+II+RD  RFHHF+DG CSCGD+W
Sbjct: 664 LRVVKNLRVCSDCHAATKFISQIVGRQIIVRDTSRFHHFKDGVCSCGDYW 713



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 130/495 (26%), Positives = 210/495 (42%), Gaps = 33/495 (6%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
           + YA+ L  C   D+++    +H Q+  +    + F  NVL++ Y K   L  A   F  
Sbjct: 36  NDYASLLWQCRGLDEVRK---LHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGR 92

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
           +   N  S+   +  Y  +     A  LF  +  +G   N    +  L    +     L 
Sbjct: 93  ITLHNAHSWNILMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALG 152

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG----------------LFN 220
             +   +     + ++ V ++LI  +  C  +E A + FD                   N
Sbjct: 153 RKLNELIASEALEIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHN 212

Query: 221 DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM-DLYV 279
                AL    +M   G K    T+  +L AC     +R   + H  A     +     V
Sbjct: 213 WRTSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVV 272

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
           A  L++LY K G + +ARR+ + MP +  + W+ MIA YAQ   + +A+ LF  M     
Sbjct: 273 AGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGA 332

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD-VFVSNALMDVYAKCGRMENSV 398
            P+  T +SV+ +CA +  L LG +IH+ +      S  + + NA++ +Y KCG +E + 
Sbjct: 333 EPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAR 392

Query: 399 ELFAESPKRNH--VTWNTMIVGYVQLGEVGKAMIMFSKML-EEQVPATEVTYSSVLRACA 455
           E+F   P R    VTW  MI  Y Q G   +A+ +F +ML +       VT+ SVL AC+
Sbjct: 393 EVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACS 452

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVAN----ALIDMYAKCGSITDARLVFDMMNDWNE- 510
            L  LE   +  C       D  V  A      L+D+  + G + +A  +     D+   
Sbjct: 453 HLGQLEQAWEHFC---SMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEAD 509

Query: 511 -VSWNAMISGYSMHG 524
            V W A +S   M+G
Sbjct: 510 VVCWIAFLSACQMNG 524



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/277 (27%), Positives = 133/277 (48%), Gaps = 4/277 (1%)

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           + S+L  C    GLD   ++H+ +    L  + F+ N L+D Y+K G +  +   F    
Sbjct: 38  YASLLWQC---RGLDEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRIT 94

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
             N  +WN ++  Y Q G    A  +F  M  + V    VT S+ L AC +   L  G +
Sbjct: 95  LHNAHSWNILMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRK 154

Query: 466 VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGL 525
           ++ L      ++D  V ++LI MY +C  I +A   FD   + + V W AMIS Y+ +  
Sbjct: 155 LNELIASEALEIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWR 214

Query: 526 SAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYT 585
           ++  L++   M   G +    T+V +L AC++   L  G A+ +   A            
Sbjct: 215 TSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAG 274

Query: 586 SMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           ++V+L G+ G +D A ++++ +P + SV  W A++ A
Sbjct: 275 TLVNLYGKCGRVDDARRVLDAMPVRTSVS-WTAMIAA 310



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 81/327 (24%), Positives = 146/327 (44%), Gaps = 21/327 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N+ + +T+L +C    +L     ++  +  +   +D    + L+ +Y +   + +A + F
Sbjct: 132 NAVTLSTALLACTAARNLALGRKLNELIASEALEIDSHVESSLITMYGRCREIEEAERAF 191

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D  PE++ + +   I  Y  + +   A+ L   +  EG +L    + + L    S     
Sbjct: 192 DRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDLR 251

Query: 175 LCPCVFACVYKLGHD-SNAFVGTALIDAFSVCGCVEFARKVFDGL--------------- 218
                      +G D S+  V   L++ +  CG V+ AR+V D +               
Sbjct: 252 NGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAY 311

Query: 219 -FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT-CYEMD 276
             N    EA+N F  M   G +P++ T   V+ +C  L T+ + K  H     +  +   
Sbjct: 312 AQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQS 371

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMP--KKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
           L +  A++ +Y K G +  AR +FE +P   + V+ W+ MI  YAQ  +  +A+ELF  M
Sbjct: 372 LMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEM 431

Query: 335 R-QAFVAPNQFTFVSVLQACATMEGLD 360
                  PN+ TF+SVL AC+ +  L+
Sbjct: 432 LIDGGTEPNRVTFLSVLCACSHLGQLE 458



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 128/296 (43%), Gaps = 35/296 (11%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNV---LLNVYVKLNRLPDATKLF 114
           +Y + L +C    DL+  +  H +    G  LD  +T V   L+N+Y K  R+ DA ++ 
Sbjct: 236 TYVSLLDACASTMDLRNGVAFHQRAAAIG--LDRSSTVVAGTLVNLYGKCGRVDDARRVL 293

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D MP R ++S+   I  Y  +    EA+ LF  +  EG E +     + +     +G   
Sbjct: 294 DAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLS 353

Query: 175 LCPCVFACVYKLGHDSNAF-VGTALIDAFSVCGCVEFARKVFDGL--------------- 218
           L   + A +      S +  +  A+I  +  CG +E AR+VF+ +               
Sbjct: 354 LGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIR 413

Query: 219 ---FNDCFEEALNFFSQMRA-VGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
               N   EEA+  F +M    G +PN  TF  VL AC  L  +  A   H C++   + 
Sbjct: 414 AYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWE-HFCSMGPDFG 472

Query: 275 M----DLYVAVALLDLYTKSGEISNARRIFEEMP--KKDVIPW-SFMIARYAQTDL 323
           +    D Y    L+DL  ++G +  A ++       + DV+ W +F+ A     DL
Sbjct: 473 VPPAGDHY--CCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDL 526


>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 657

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 215/600 (35%), Positives = 345/600 (57%), Gaps = 21/600 (3%)

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
            ++AL   SQ  +    P+  T+  ++  C    ++      H   L    + D ++A  
Sbjct: 62  LKQALRVLSQESS----PSQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQDPFLATK 117

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+ +Y+  G +  AR++F++  K+ +  W+ +           + + L+ +M +  V  +
Sbjct: 118 LIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESD 177

Query: 343 QFTFVSVLQACA----TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           +FT+  VL+AC     T + L  G +IH+ + R G  S V++   L+D+YA+ G ++ + 
Sbjct: 178 RFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYAS 237

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPAT--EVTYSSVLRACAS 456
            +F   P RN V+W+ MI  Y + G+  +A+  F +M+ E   ++   VT  SVL+ACAS
Sbjct: 238 YVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACAS 297

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           LAALE G  +H   ++   D  + V +AL+ MY +CG +   + VFD M+D + VSWN++
Sbjct: 298 LAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSL 357

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           IS Y +HG   + +++F+ M   G  P  +TFV VL ACS+ GL+E+G+  F+SM  ++G
Sbjct: 358 ISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHG 417

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
           I+P +EHY  MV LLGRA  LD+AAK+++ +  +P   +W +LLG+C IH NVE+   ++
Sbjct: 418 IKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERAS 477

Query: 637 QHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYF 685
           + +   EP++   +VLL++IYA A+ W+           +   K PG  W+E +  ++ F
Sbjct: 478 RRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSF 537

Query: 686 RAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAF 745
            + D  +  M  I   L  L    ++ GYIP    VL ++  +EKER +  HSEKLALAF
Sbjct: 538 VSMDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAF 597

Query: 746 ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            L       PIRI KNLR+C DCH   K ISK +++EI++RDV+RFH F++G CSCGD+W
Sbjct: 598 GLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 108/449 (24%), Positives = 196/449 (43%), Gaps = 65/449 (14%)

Query: 13  KQLTHQSKINAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDL 72
           + L  + K+   LR LS +++ S Q                    +Y   +  C     L
Sbjct: 54  QSLCKEGKLKQALRVLSQESSPSQQ--------------------TYELLILCCGHRSSL 93

Query: 73  QTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGY 132
              + +H  +L  G+  D F    L+ +Y  L  +  A K+FD+  +R    +    +  
Sbjct: 94  SDGLRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRAL 153

Query: 133 TVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC--------VFACVY 184
           T++    E +GL+  ++R G E + F +T  LK  V    A  C          + A + 
Sbjct: 154 TLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACV----ASECTADHLTKGKEIHAHLT 209

Query: 185 KLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------FNDCFE------EALN 228
           + G++S+ ++ T L+D ++  GCV++A  VF+G+             C+       EAL 
Sbjct: 210 RRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALR 269

Query: 229 FFSQM--RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
            F +M        PN+ T   VL+AC  L  +   +  HG  L+   +  L V  AL+ +
Sbjct: 270 TFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTM 329

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y + G++   +R+F+ M  +DV+ W+ +I+ Y        A+++F  M     +P   TF
Sbjct: 330 YGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTF 389

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRV-GLLSDVFVSNALMDVYAKCGRMENSVELFAE-- 403
           VSVL AC+    ++ G ++   + R  G+   V     ++D+  +  R++ + ++  +  
Sbjct: 390 VSVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMR 449

Query: 404 ---SPKRNHVTWNTM-----IVGYVQLGE 424
               PK     W ++     I G V+L E
Sbjct: 450 TEPGPK----VWGSLLGSCRIHGNVELAE 474


>gi|224125332|ref|XP_002329779.1| predicted protein [Populus trichocarpa]
 gi|222870841|gb|EEF07972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 228/579 (39%), Positives = 343/579 (59%), Gaps = 16/579 (2%)

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           P++  + F+L+A      + +    H   + + Y     +   LL+L   +G IS  R+I
Sbjct: 10  PHSPAYNFLLQAG---PRLYLLHQVHAHIIVSGYGRSRSLLTKLLNLACAAGSISYTRQI 66

Query: 300 FEEMPKKDVIPWSFMIARYAQT-DLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           F  +P  D   ++ +I   +++ + SI ++  + RM  + V+P+ +TF SV+++CA +  
Sbjct: 67  FLAVPNPDSFLFTSLIKSTSKSHNFSIYSLYFYSRMVLSNVSPSNYTFTSVIKSCADLSA 126

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           L  G  +H  V+  G   DV+V  AL+ +Y KCG + N+ ++F +  +R+ V WN+MI G
Sbjct: 127 LKHGRVVHGHVLVHGFGLDVYVQAALVALYGKCGDLINARKVFDKIRERSIVAWNSMISG 186

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           Y Q G   +A+ +F +M E  V     T+ SVL ACA L A   G  VH   V    D++
Sbjct: 187 YEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHLGAFSLGCWVHEYIVGNGLDLN 246

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
           VV+  +LI+MY +CG+++ AR VFD M + N V+W AMISGY  +G  ++ +++F  M++
Sbjct: 247 VVLGTSLINMYIRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRR 306

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLD 598
            G  PN++TFV VLSAC++ GL+ +G   F S+   Y + P +EH   +V +LGRAG LD
Sbjct: 307 NGLFPNSITFVAVLSACAHAGLVNEGRRLFASIREEYHLVPGVEHNVCLVDMLGRAGLLD 366

Query: 599 KAAKLI-EGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIY 657
           +A   I E IP  P+  I  A+LGAC +H N ++G   A+H+L  EPE+ A +V+LSNIY
Sbjct: 367 EAYNFIKEEIPENPAPAILTAMLGACKMHKNFDLGAQVAEHLLAAEPENPAHYVILSNIY 426

Query: 658 AMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLN 706
           A+A   +           K   K+ G S +E     + F  GD SH++ N I   L+ L 
Sbjct: 427 ALAGRMDQVEIVRNNMIRKCLKKQVGYSTVEVDQKTYLFSMGDKSHSETNAIYHYLDELM 486

Query: 707 MKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICV 766
            K  +AGY+P   +V+ ++ E+E+E  L  HSEKLA+AF L K    +PIRI+KNLR+C 
Sbjct: 487 WKCSEAGYVPVSDSVMHELEEEEREYALRYHSEKLAIAFGLLKTSHGTPIRIVKNLRMCE 546

Query: 767 DCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           DCH+AIK IS I  REII+RD  RFHHF+ G CSC D+W
Sbjct: 547 DCHSAIKFISAISSREIIVRDKLRFHHFKVGSCSCLDYW 585



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 96/322 (29%), Positives = 170/322 (52%), Gaps = 20/322 (6%)

Query: 196 TALIDAFSVCGCVEFARKVFDGLFN-DCFE----------------EALNFFSQMRAVGF 238
           T L++     G + + R++F  + N D F                  +L F+S+M     
Sbjct: 48  TKLLNLACAAGSISYTRQIFLAVPNPDSFLFTSLIKSTSKSHNFSIYSLYFYSRMVLSNV 107

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
            P+N+TF  V+K+C  L  ++  +  HG  L   + +D+YV  AL+ LY K G++ NAR+
Sbjct: 108 SPSNYTFTSVIKSCADLSALKHGRVVHGHVLVHGFGLDVYVQAALVALYGKCGDLINARK 167

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           +F+++ ++ ++ W+ MI+ Y Q   + +A+ LF RM++  V P+  TFVSVL ACA +  
Sbjct: 168 VFDKIRERSIVAWNSMISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHLGA 227

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
             LG  +H  +V  GL  +V +  +L+++Y +CG +  + E+F    +RN V W  MI G
Sbjct: 228 FSLGCWVHEYIVGNGLDLNVVLGTSLINMYIRCGNVSKAREVFDSMKERNVVAWTAMISG 287

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           Y   G   +A+ +F +M    +    +T+ +VL ACA    +  G ++   +++  Y + 
Sbjct: 288 YGTNGYGSQAVELFHEMRRNGLFPNSITFVAVLSACAHAGLVNEGRRLFA-SIREEYHLV 346

Query: 479 VVVAN--ALIDMYAKCGSITDA 498
             V +   L+DM  + G + +A
Sbjct: 347 PGVEHNVCLVDMLGRAGLLDEA 368



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 90/362 (24%), Positives = 152/362 (41%), Gaps = 59/362 (16%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +++++ + ++SC     L+    +H  VL  G  LD++    L+ +Y K   L +A K+F
Sbjct: 110 SNYTFTSVIKSCADLSALKHGRVVHGHVLVHGFGLDVYVQAALVALYGKCGDLINARKVF 169

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D++ ER+ +++ + I GY  +    EA+GLF  +   G E +   F + L     +G   
Sbjct: 170 DKIRERSIVAWNSMISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHLGAFS 229

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------- 218
           L   V   +   G D N  +GT+LI+ +  CG V  AR+VFD +                
Sbjct: 230 LGCWVHEYIVGNGLDLNVVLGTSLINMYIRCGNVSKAREVFDSMKERNVVAWTAMISGYG 289

Query: 219 FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            N    +A+  F +MR  G  PN+ TF  VL AC     +   +     +++  Y +   
Sbjct: 290 TNGYGSQAVELFHEMRRNGLFPNSITFVAVLSACAHAGLVNEGRRLFA-SIREEYHLVPG 348

Query: 279 VA--VALLDLYTKSGEISNARR-IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
           V   V L+D+  ++G +  A   I EE+P+                              
Sbjct: 349 VEHNVCLVDMLGRAGLLDEAYNFIKEEIPEN----------------------------- 379

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQI--HSLVVRVGLLSDVFVSNALMDVYAKCGR 393
                P      ++L AC   +  DLG Q+  H L       +   +   L ++YA  GR
Sbjct: 380 -----PAPAILTAMLGACKMHKNFDLGAQVAEHLLAAEPENPAHYVI---LSNIYALAGR 431

Query: 394 ME 395
           M+
Sbjct: 432 MD 433



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 60/136 (44%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E +S ++ + L +C           +H  ++  G  L++     L+N+Y++   +  A +
Sbjct: 209 EPDSATFVSVLSACAHLGAFSLGCWVHEYIVGNGLDLNVVLGTSLINMYIRCGNVSKARE 268

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +FD M ERN +++   I GY  +    +AV LF  + R G   N   F A L      G 
Sbjct: 269 VFDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLFPNSITFVAVLSACAHAGL 328

Query: 173 AELCPCVFACVYKLGH 188
                 +FA + +  H
Sbjct: 329 VNEGRRLFASIREEYH 344


>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
 gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
          Length = 739

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 250/733 (34%), Positives = 378/733 (51%), Gaps = 95/733 (12%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           ++  +N  +  +++  R+ DA +LF  MP R+T ++   + GY+ + +   A  LF  + 
Sbjct: 37  EVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP 96

Query: 150 REGHELNPFAFTAFLKVLV-------SMGWAELCPCVFACVYKLGHDSNAFVGTALIDAF 202
           R     + +++   L  L        + G  +  P   +  Y +           +I + 
Sbjct: 97  RP----DNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNV-----------MISSH 141

Query: 203 SVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAK 262
           +  G V  AR  FD               +  AV +  N    A+V          RV +
Sbjct: 142 ANHGLVSLARHYFD------------LAPEKDAVSW--NGMLAAYVRNG-------RV-E 179

Query: 263 SAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTD 322
            A G    +  E D+    AL+  Y + G++S AR +F+ MP +DV+ W+ M++ YA+  
Sbjct: 180 EARGL-FNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRG 238

Query: 323 LSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSN 382
             ++A  LF     A    + FT+ +V+   A    L+   ++   +     +S     N
Sbjct: 239 DMVEARRLF----DAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVS----WN 290

Query: 383 ALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE---- 438
           A++  Y +   M+ + ELF   P RN  +WNTM+ GY Q G + +A  +F  M ++    
Sbjct: 291 AMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVS 350

Query: 439 ---------QVPATEVT------------------YSSVLRACASLAALEPGMQVHCLTV 471
                    Q   +E T                  ++ VL  CA +AALE GMQ+H   +
Sbjct: 351 WAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLI 410

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
           +A Y +   V NAL+ MY KCG++ DAR  F+ M + + VSWN MI+GY+ HG   E L+
Sbjct: 411 RAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALE 470

Query: 532 VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLL 591
           +FD+M+    +P+++T VGVL+ACS+ GL+E+G +YF SM  ++G+    EHYT M+ LL
Sbjct: 471 IFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLL 530

Query: 592 GRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHV 651
           GRAG L +A  L++ +PF+P   +W ALLGA  IH N E+GR +A+ I + EPE+   +V
Sbjct: 531 GRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYV 590

Query: 652 LLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRG 700
           LLSNIYA +  W           E+   K PG SWIE Q  VH F AGD  H +   I  
Sbjct: 591 LLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYA 650

Query: 701 MLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIK 760
            LE L+M+ +KAGY+     VL DV E+EKE  L  HSEKLA+A+ +  +PP  PIR+IK
Sbjct: 651 FLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIK 710

Query: 761 NLRICVDCHTAIK 773
           NLR+C DCH A K
Sbjct: 711 NLRVCGDCHNAFK 723



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 103/252 (40%), Gaps = 28/252 (11%)

Query: 88  CLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFST 147
           C ++ + N +L  Y +   L +A  +FD MP+++ +S+   +  Y+      E + LF  
Sbjct: 314 CRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIE 373

Query: 148 LHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGC 207
           + R G  +N  AF   L     +   E    +   + + G+    FVG AL+  +  CG 
Sbjct: 374 MGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGN 433

Query: 208 VEFARKVFD---------------GLFNDCF-EEALNFFSQMRAVGFKPNNFTFAFVLKA 251
           +E AR  F+               G     F +EAL  F  MR    KP++ T   VL A
Sbjct: 434 MEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAA 493

Query: 252 CLGLDTIRVAKSAHGCALKTCYEMDLYVAVA------LLDLYTKSGEISNARRIFEEMP- 304
           C     +       G +       D  V         ++DL  ++G ++ A  + ++MP 
Sbjct: 494 CSHSGLVE-----KGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPF 548

Query: 305 KKDVIPWSFMIA 316
           + D   W  ++ 
Sbjct: 549 EPDSTMWGALLG 560



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 60/261 (22%), Positives = 103/261 (39%), Gaps = 32/261 (12%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  ++A  L +C     L+  M +H ++++ G  +  F  N LL +Y K   + DA   F
Sbjct: 382 NRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAF 441

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           +EM ER+ +S+ T I GY       EA+ +F  +     + +       L      G  E
Sbjct: 442 EEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVE 501

Query: 175 LCPCVFACVYKLGHDSNAFVG----TALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFF 230
                F   Y + HD          T +ID     G +  A  +                
Sbjct: 502 KGISYF---YSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDL---------------- 542

Query: 231 SQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA---VALLDLY 287
             M+ + F+P++  +     A LG   I         A +  +E++   A   V L ++Y
Sbjct: 543 --MKDMPFEPDSTMWG----ALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIY 596

Query: 288 TKSGEISNARRIFEEMPKKDV 308
             SG+  +AR++   M ++ V
Sbjct: 597 ASSGKWRDARKMRVMMEERGV 617


>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
          Length = 497

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 205/527 (38%), Positives = 315/527 (59%), Gaps = 50/527 (9%)

Query: 291 GEISNARRIFEEMPKKDVIPWSFMIARYAQT-DLSIDAVELFCRMRQAFVAPNQFTFVSV 349
           G + ++R++FE+MP+ +V+ W+ +I  Y Q+ +   +A+ELFC+M  A V          
Sbjct: 9   GSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISASVN--------- 59

Query: 350 LQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNH 409
              C                          V N+L+ +YA+ GRME++ + F    ++N 
Sbjct: 60  ---C--------------------------VGNSLISMYARSGRMEDARKAFDILFEKNL 90

Query: 410 VTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCL 469
           V++N ++ GY +  +  +A ++F+++ +  +  +  T++S+L   AS+ A+  G Q+H  
Sbjct: 91  VSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGR 150

Query: 470 TVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEV 529
            +K  Y  +  + NALI MY++CG+I  A  VF+ M D N +SW +MI+G++ HG +   
Sbjct: 151 LLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRA 210

Query: 530 LKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVS 589
           L++F  M + G +PN +T+V VLSACS+ G++ +G+ +F SM   +GI P +EHY  MV 
Sbjct: 211 LEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVD 270

Query: 590 LLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEAT 649
           LLGR+G L +A + I  +P     ++WR LLGAC +H N E+GR +A+ IL+ EP+D A 
Sbjct: 271 LLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAA 330

Query: 650 HVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNII 698
           ++LLSN++A A  W           E+   KE G SWIE +  VH F  G+TSH     I
Sbjct: 331 YILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQI 390

Query: 699 RGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRI 758
              L+ L  K ++ GYIPD   VL D+ E++KE++L+ HSEK+A+AF L     S PIRI
Sbjct: 391 YQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRI 450

Query: 759 IKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            KNLR+C DCHTAIK IS    REI++RD +RFHH ++G CSC D+W
Sbjct: 451 FKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 497



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 136/249 (54%), Gaps = 4/249 (1%)

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V  +L+ +Y +SG + +AR+ F+ + +K+++ ++ ++  YA+   S +A  LF  +    
Sbjct: 61  VGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTG 120

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           +  + FTF S+L   A++  +  G QIH  +++ G  S+  + NAL+ +Y++CG +E + 
Sbjct: 121 IGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAF 180

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
           ++F E   RN ++W +MI G+ + G   +A+ MF KMLE      E+TY +VL AC+ + 
Sbjct: 181 QVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVG 240

Query: 459 ALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNA 515
            +  G Q H  ++   + +   + +   ++D+  + G + +A   +  M    + + W  
Sbjct: 241 MISEG-QKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRT 299

Query: 516 MISGYSMHG 524
           ++    +HG
Sbjct: 300 LLGACRVHG 308



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 157/365 (43%), Gaps = 68/365 (18%)

Query: 107 LPDATKLFDEMPERNTISFVTTIQGYTVSSQF-VEAVGLFSTLHREGHELNPFAFTAFLK 165
           + D+ K+F++MPE N +S+   I  Y  S +   EA+ LF                    
Sbjct: 11  VDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELF-------------------- 50

Query: 166 VLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF-- 223
                     C  + A V          VG +LI  ++  G +E ARK FD LF      
Sbjct: 51  ----------CKMISASV--------NCVGNSLISMYARSGRMEDARKAFDILFEKNLVS 92

Query: 224 --------------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCAL 269
                         EEA   F+++   G   + FTFA +L     +  +   +  HG  L
Sbjct: 93  YNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLL 152

Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVE 329
           K  Y+ +  +  AL+ +Y++ G I  A ++F EM  ++VI W+ MI  +A+   +  A+E
Sbjct: 153 KGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALE 212

Query: 330 LFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ-IHSLVVRVGLLSDVFVSNALMDVY 388
           +F +M +    PN+ T+V+VL AC+ +  +  G +  +S+    G++  +     ++D+ 
Sbjct: 213 MFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLL 272

Query: 389 AKCGRMENSVELFAESP-KRNHVTWNTM-----IVGYVQLGEVGKAMIMFSKMLEEQVPA 442
            + G +  ++E     P   + + W T+     + G  +LG     MI+      EQ P 
Sbjct: 273 GRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMIL------EQEPD 326

Query: 443 TEVTY 447
               Y
Sbjct: 327 DPAAY 331



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 84/327 (25%), Positives = 141/327 (43%), Gaps = 33/327 (10%)

Query: 53  EFNSHSYATSLQSCIQNDDL-QTAMTIHCQVLKKG-NCLDLFATNVLLNVYVKLNRLPDA 110
           E N  S+   + + +Q+ +  + A+ + C+++    NC+     N L+++Y +  R+ DA
Sbjct: 23  EHNVMSWTAIITAYVQSGECDKEAIELFCKMISASVNCVG----NSLISMYARSGRMEDA 78

Query: 111 TKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSM 170
            K FD + E+N +S+   + GY  + +  EA  LF+ +   G  ++ F F + L    S+
Sbjct: 79  RKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASI 138

Query: 171 GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-------------- 216
           G       +   + K G+ SN  +  ALI  +S CG +E A +VF+              
Sbjct: 139 GAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMI 198

Query: 217 -GLFNDCF-EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT--- 271
            G     F   AL  F +M   G KPN  T+  VL AC  +  I   +       K    
Sbjct: 199 TGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGI 258

Query: 272 CYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIAR---YAQTDLSIDA 327
              M+ Y    ++DL  +SG +  A      MP   D + W  ++     +  T+L   A
Sbjct: 259 VPRMEHY--ACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHA 316

Query: 328 VELFCRMRQAFVAPNQFTFVSVLQACA 354
            E+   + Q    P  +  +S L A A
Sbjct: 317 AEMI--LEQEPDDPAAYILLSNLHASA 341


>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Cucumis sativus]
          Length = 650

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 215/553 (38%), Positives = 314/553 (56%), Gaps = 46/553 (8%)

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           +F ++   +   W+ MI  YA   L  ++   + RMR+  V P  FTF ++ +AC     
Sbjct: 98  VFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALN 157

Query: 359 LDLGNQIHSLVVRVG-LLSDVFVSNALMDVYAKCG------------------------- 392
           +DLG Q+H+  + +G   SD++V N+++D+Y KCG                         
Sbjct: 158 MDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIV 217

Query: 393 ------RMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVT 446
                  ME++  LF + P ++ V W  M+ GY Q G   +A+  F KM +  +   EVT
Sbjct: 218 AYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVT 277

Query: 447 YSSVLRACASLAALEPGMQVHCLTVKANY--DMDVVVANALIDMYAKCGSITDARLVFDM 504
            + V+ ACA L A++    +  +  ++ +    +VVV +ALIDMY+KCGS  +A  VF++
Sbjct: 278 LAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEV 337

Query: 505 MNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG 564
           M + N  S+++MI GY+MHG +   L++F  M +   RPN +TF+G+LSACS+ GL+EQG
Sbjct: 338 MKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQG 397

Query: 565 EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACI 624
              F  M   +G+ P  +HY  MV LLGRAG L++A  L++ +P +P+  +W ALLGAC 
Sbjct: 398 RQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACR 457

Query: 625 IHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGL 673
           IH N +I +++A  +   EP     ++LLSNIYA A  W           EK   K PG 
Sbjct: 458 IHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGC 517

Query: 674 SWIENQ-GMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKER 732
           SW E + G +H F AGDT+H   + IR  L+ L  + R  GY P+L +   D+ +DEKER
Sbjct: 518 SWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKER 577

Query: 733 YLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFH 792
            L  HSEKLALA+ L        I+I+KN+RIC DCH  +   S+I  REII+RD  RFH
Sbjct: 578 ILMSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFH 637

Query: 793 HFQDGCCSCGDFW 805
           HF +G CSCG+FW
Sbjct: 638 HFHNGTCSCGNFW 650



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/448 (22%), Positives = 192/448 (42%), Gaps = 57/448 (12%)

Query: 26  RGLSAQAALSTQQCSNSTTTP--ITFSVSEFNSHSYATSLQSCIQNDDLQTAMT-IHCQV 82
           R LS  + LS  Q   +  +P  I F   +         L S + +  L + +  +H  +
Sbjct: 6   RNLSTVSKLSHLQNLQTRGSPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQVHAHI 65

Query: 83  LKKGNCLDLFATNVLLNVYVKLNRLPDATKL--FDEMPERNTISFVTTIQGYTVSSQFVE 140
           ++ G     +    L+ +  K++    +  L  F ++   N   +   I+GY +     E
Sbjct: 66  IRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQGLLSE 125

Query: 141 AVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGH-DSNAFVGTALI 199
           +   ++ + R+G     F F+A  K   +    +L   V A    +G   S+ +VG ++I
Sbjct: 126 STNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMI 185

Query: 200 DAFSVCGCVEFARKVFD---------------------------GLFNDC---------- 222
           D +  CG +  ARKVFD                           GLF+D           
Sbjct: 186 DLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPSKDMVAWTA 245

Query: 223 ----------FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC 272
                      +EAL +F +M+ VG + +  T A V+ AC  L  ++ A      A ++ 
Sbjct: 246 MVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSG 305

Query: 273 Y--EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVEL 330
           +    ++ V  AL+D+Y+K G    A ++FE M +++V  +S MI  YA    +  A++L
Sbjct: 306 FGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQL 365

Query: 331 FCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR-VGLLSDVFVSNALMDVYA 389
           F  M +  + PN+ TF+ +L AC+    ++ G Q+ + + +  G+         ++D+  
Sbjct: 366 FHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLG 425

Query: 390 KCGRMENSVELFAESP-KRNHVTWNTMI 416
           + G +E +++L    P + N   W  ++
Sbjct: 426 RAGCLEEALDLVKTMPMEPNGGVWGALL 453



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 79/345 (22%), Positives = 127/345 (36%), Gaps = 78/345 (22%)

Query: 23  AWLRGLSAQAALSTQ-----QCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMT 77
           A +RG + Q  LS       +       P++F+ S           ++C    ++     
Sbjct: 112 AMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSAL--------FKACGAALNMDLGKQ 163

Query: 78  IHCQ-VLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSS 136
           +H Q +L  G   DL+  N ++++YVK   L  A K+FDEM ER+ +S+   I  Y    
Sbjct: 164 VHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYG 223

Query: 137 QFVEAVGLFSTLHRE----------GHELN--PFAFTAFLKVLVSMGW----AELCPCVF 180
               A GLF  L  +          G+  N  P     + + +  +G       L   + 
Sbjct: 224 DMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVIS 283

Query: 181 ACVY-----------------KLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----- 218
           AC                     G   N  VG+ALID +S CG  + A KVF+ +     
Sbjct: 284 ACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNV 343

Query: 219 -----------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGC 267
                       +     AL  F  M     +PN  TF  +L AC     +   +     
Sbjct: 344 FSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFA- 402

Query: 268 ALKTCYEMDLYVAVA--------LLDLYTKSGEISNARRIFEEMP 304
                 +M+ +  VA        ++DL  ++G +  A  + + MP
Sbjct: 403 ------KMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMP 441


>gi|218195864|gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indica Group]
          Length = 690

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 239/667 (35%), Positives = 358/667 (53%), Gaps = 42/667 (6%)

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG----------------LFNDC 222
           + A + KLG  S+  +   LID ++ CG +  A +VFDG                L +  
Sbjct: 26  LHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGE 85

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
             E L  F +MR  G  PN FT +  LKAC G    R     HG  ++T +E    VA +
Sbjct: 86  ARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRAGVQIHGVCVRTGFEGHDVVANS 143

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM-RQAFVAP 341
           L+ +Y+K     +ARR+F+ +P +++  W+ MI+ YA      D++ +F  M R+    P
Sbjct: 144 LVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQP 203

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHS-LVVR-VGLLSDVFVSNALMDVYAKCGRMENSVE 399
           ++FTF S+L+AC+ +     G Q+H+ + VR V   S+  ++ AL+DVY KC R+  +++
Sbjct: 204 DEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQ 263

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +F    +RN + W T+IVG+ Q G+V +AM +F +     V A     SSV+   A  A 
Sbjct: 264 VFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFAL 323

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
           +E G QVHC T K    +DV VAN+L+DMY KCG   +A   F  M   N VSW AMI+G
Sbjct: 324 VEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMING 383

Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
              HG   E + +F+ MQ  G   + + ++ +LSACS+ GL+++   YF  +  +  + P
Sbjct: 384 VGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRP 443

Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHI 639
             EHY  MV LLGRAG L +A +LI  +P +P+V +W+ LL AC +H +V +GR     +
Sbjct: 444 KAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDVL 503

Query: 640 LDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYF-RA 687
           L  + ++   +V+LSNI A A  W            K   K+ G SW E    VH+F   
Sbjct: 504 LAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDKEVHFFYGG 563

Query: 688 GDTSHADMNIIRGMLEWLNMKSR-KAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFA 746
           GD +H     IR  L  +  + R + GY  D    L DV E+ +   L  HSE+LA+   
Sbjct: 564 GDDAHPQAGDIRRALREVEARMRERLGYSGDARCALHDVDEESRVESLREHSERLAVGLW 623

Query: 747 LFKMPPSSP--------IRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGC 798
           L +              +R+ KNLR+C DCH  +K +S +V+R +++RD +RFH FQ+G 
Sbjct: 624 LLRDGTGDDGGGGGGEVVRVYKNLRVCGDCHEFLKGLSAVVRRVVVVRDANRFHRFQNGA 683

Query: 799 CSCGDFW 805
           CSC D+W
Sbjct: 684 CSCRDYW 690



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 226/503 (44%), Gaps = 33/503 (6%)

Query: 60  ATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPE 119
           A  L++  +   L+  + +H  ++K G   D    N L+++Y K  +L  A ++FD MPE
Sbjct: 8   ADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPE 67

Query: 120 RNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCV 179
           RN +S+   + G+    +  E + LF  +   G   N F  +A LK     G       +
Sbjct: 68  RNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLK--ACGGGTRAGVQI 125

Query: 180 FACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-------GLFNDCF--------- 223
                + G + +  V  +L+  +S       AR+VFD         +N            
Sbjct: 126 HGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQG 185

Query: 224 EEALNFFSQM-RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGC-ALKTCYEM-DLYVA 280
            ++L  F +M R    +P+ FTFA +LKAC GL   R     H   A++      +  +A
Sbjct: 186 RDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILA 245

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
            ALLD+Y K   +  A ++F+ + +++ I W+ +I  +AQ     +A+ LF R   + V 
Sbjct: 246 GALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVR 305

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
            +     SV+   A    ++ G Q+H    +     DV V+N+L+D+Y KCG    +   
Sbjct: 306 ADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRR 365

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F E P RN V+W  MI G  + G   +A+ +F +M  E V A EV Y ++L AC+     
Sbjct: 366 FREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACS----- 420

Query: 461 EPGMQVHCLTVKANYDMDVVVANA------LIDMYAKCGSITDAR-LVFDMMNDWNEVSW 513
             G+   C    +    D  +         ++D+  + G + +A+ L+  M  +     W
Sbjct: 421 HSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVW 480

Query: 514 NAMISGYSMHGLSAEVLKVFDLM 536
             ++S   +H   A   +V D++
Sbjct: 481 QTLLSACRVHKDVAVGREVGDVL 503



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 198/389 (50%), Gaps = 11/389 (2%)

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
            A +L+A     ++R     H   +K  +  D  +   L+D+Y K G++  A  +F+ MP
Sbjct: 7   IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMP 66

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
           +++V+ W+ ++  +     + + + LF  MR +  +PN+FT  + L+AC    G   G Q
Sbjct: 67  ERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRAGVQ 124

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
           IH + VR G      V+N+L+ +Y+K     ++  +F   P RN  TWN+MI GY   G+
Sbjct: 125 IHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQ 184

Query: 425 VGKAMIMFSKMLE--EQVPATEVTYSSVLRACASLAALEPGMQVH-CLTVKA-NYDMDVV 480
              ++++F +M    ++ P  E T++S+L+AC+ L A   G QVH  + V+  +   + +
Sbjct: 185 GRDSLLVFREMQRRHDEQP-DEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAI 243

Query: 481 VANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG 540
           +A AL+D+Y KC  +  A  VFD +   N + W  +I G++  G   E + +F      G
Sbjct: 244 LAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSG 303

Query: 541 WRPNNLTFVGVLSACSNGGLLEQG-EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDK 599
            R +      V++  ++  L+EQG + +  +     G++  + +  S+V +  + G   +
Sbjct: 304 VRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVAN--SLVDMYLKCGLTGE 361

Query: 600 AAKLIEGIPFQPSVMIWRALLGACIIHNN 628
           A +    +P + +V+ W A++     H +
Sbjct: 362 AGRRFREMPAR-NVVSWTAMINGVGKHGH 389


>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
 gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
          Length = 862

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 230/691 (33%), Positives = 365/691 (52%), Gaps = 31/691 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           ++H+    ++SC     +     +H      G   D++  + L+ +Y     L DA   F
Sbjct: 140 DAHTLPYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAF 199

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D MP R+ + +   + GY  +     AV LF  +   G E N      FL V  +   A+
Sbjct: 200 DGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAE--AD 257

Query: 175 LCPCV--FACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-----------GLFND 221
           L   V   +   K G +    V   L+  ++ C C++ A ++F+           G+ + 
Sbjct: 258 LLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISG 317

Query: 222 C-----FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
           C      +EAL  F  M   G +P++ T   +L A   L+ ++  K  HG  ++ C  MD
Sbjct: 318 CVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMD 377

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
            ++  AL+D+Y K  ++  AR +++     DV+  S +I+ Y    +S  A+++F  + +
Sbjct: 378 AFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLE 437

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             + PN  T  SVL ACA++  L LG +IH  V+R       +V +ALMD+YAKCGR++ 
Sbjct: 438 QCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDL 497

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           S  +F++   ++ VTWN+MI  + Q GE  +A+ +F +M  E +    VT SS L ACAS
Sbjct: 498 SHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACAS 557

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           L A+  G ++H + +K     D+   +ALIDMYAKCG++  A  VF+ M D NEVSWN++
Sbjct: 558 LPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSI 617

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           IS Y  HGL  E +     MQ+ G++P+++TF+ ++SAC++ GL+E+G   F+ M   Y 
Sbjct: 618 ISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYL 677

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
           I P +EH+  MV L  R+G LDKA + I  +PF+P   IW ALL AC +H NVE+  +++
Sbjct: 678 IAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIAS 737

Query: 637 QHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYF 685
           Q +   +P +   +VL+SNI A+A  W+  +            K PG SW++     H F
Sbjct: 738 QELFKLDPGNSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLF 797

Query: 686 RAGDTSHADMNIIRGMLEWLNMKSRKAGYIP 716
            A D SH +   I   L+ L  + R+ GY+P
Sbjct: 798 VASDKSHPESEDIYTSLKALLQELREEGYVP 828



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 137/489 (28%), Positives = 239/489 (48%), Gaps = 18/489 (3%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N  + A  L  C    DL + + +H   +K G   ++   N LL++Y K   L DA +
Sbjct: 239 EPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWR 298

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           LF+ +P  + +++   I G   +    EA+GLF  + R G   +     + L  L  +  
Sbjct: 299 LFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNG 358

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG--------------- 217
            +    V   + +     +AF+ +AL+D +  C  V  AR ++D                
Sbjct: 359 LKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISG 418

Query: 218 -LFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
            + N   E+AL  F  +     KPN  T A VL AC  +  + + +  HG  L+  YE  
Sbjct: 419 YVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGK 478

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
            YV  AL+D+Y K G +  +  IF +M  KD + W+ MI+ ++Q     +A++LF +M  
Sbjct: 479 CYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCM 538

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             +  N  T  S L ACA++  +  G +IH ++++  + +D+F  +AL+D+YAKCG ME 
Sbjct: 539 EGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMEL 598

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           ++ +F   P +N V+WN++I  Y   G V +++    +M EE      VT+ +++ ACA 
Sbjct: 599 ALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAH 658

Query: 457 LAALEPGMQV-HCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWN 514
              +E G+Q+  C+T +      +     ++D+Y++ G +  A + + DM    +   W 
Sbjct: 659 AGLVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWG 718

Query: 515 AMISGYSMH 523
           A++    +H
Sbjct: 719 ALLHACRVH 727



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 199/383 (51%), Gaps = 2/383 (0%)

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           P+  T  +V+K+C  L  + + +  H  A  T    D+YV  AL+ +Y+ +G + +AR  
Sbjct: 139 PDAHTLPYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDA 198

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL 359
           F+ MP +D + W+ M+  Y +      AV LF  MR +   PN  T    L  CA    L
Sbjct: 199 FDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADL 258

Query: 360 DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGY 419
             G Q+HSL V+ GL  +V V+N L+ +YAKC  ++++  LF   P+ + VTWN MI G 
Sbjct: 259 LSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGC 318

Query: 420 VQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDV 479
           VQ G + +A+ +F  ML        VT  S+L A   L  L+ G +VH   ++    MD 
Sbjct: 319 VQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDA 378

Query: 480 VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
            + +AL+D+Y KC  +  AR ++D     + V  + +ISGY ++G+S + L++F  + ++
Sbjct: 379 FLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQ 438

Query: 540 GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDK 599
             +PN +T   VL AC++   L  G+     ++ N     C    ++++ +  + G LD 
Sbjct: 439 CIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVE-SALMDMYAKCGRLDL 497

Query: 600 AAKLIEGIPFQPSVMIWRALLGA 622
           +  +   +  +  V  W +++ +
Sbjct: 498 SHYIFSKMSLKDEV-TWNSMISS 519



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 165/314 (52%), Gaps = 10/314 (3%)

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDV---IPWSFMIARYAQTDLSIDAVELFCRM--RQA 337
           LL +Y  +    +A  +F  +P+      +PW+++I  +        AV  + +M    A
Sbjct: 76  LLGMYVLARRFRDAVAVFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPA 135

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
             +P+  T   V+++CA +  + LG  +H      GL SDV+V +AL+ +Y+  G + ++
Sbjct: 136 APSPDAHTLPYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDA 195

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
            + F   P R+ V WN M+ GY++ G+VG A+ +F  M          T +  L  CA+ 
Sbjct: 196 RDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAE 255

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
           A L  G+Q+H L VK   + +V VAN L+ MYAKC  + DA  +F+++   + V+WN MI
Sbjct: 256 ADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMI 315

Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
           SG   +GL  E L +F  M + G RP+++T V +L A ++   L+QG+      V  Y I
Sbjct: 316 SGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKE-----VHGYII 370

Query: 578 EPCIEHYTSMVSLL 591
             C+     +VS L
Sbjct: 371 RNCVHMDAFLVSAL 384



 Score = 39.7 bits (91), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 41/190 (21%), Positives = 82/190 (43%), Gaps = 12/190 (6%)

Query: 449 SVLRACASLAALEPGMQVHCLTVK----ANYDMDVVVANALIDMYAKCGSITDARLVFDM 504
           ++LR C S   L  G+Q+H   V     +N++  + +   L+ MY       DA  VF  
Sbjct: 37  ALLRGCVSAPHLPLGLQIHARAVVSGALSNHN-HLALHTRLLGMYVLARRFRDAVAVFSA 95

Query: 505 MND---WNEVSWNAMISGYSMHGLSAEVLKVFDLM--QQRGWRPNNLTFVGVLSACSNGG 559
           +      + + WN +I G++  G  +  +  +  M        P+  T   V+ +C+  G
Sbjct: 96  LPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALG 155

Query: 560 LLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRAL 619
            +  G    ++  A  G+   +   ++++ +   AG L  A    +G+P++  V+ W  +
Sbjct: 156 AVSLGRLVHRTARAT-GLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVL-WNVM 213

Query: 620 LGACIIHNNV 629
           +   I   +V
Sbjct: 214 MDGYIKAGDV 223


>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
          Length = 614

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 216/556 (38%), Positives = 328/556 (58%), Gaps = 15/556 (2%)

Query: 265 HGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLS 324
           H   ++  +  D ++   LL   +K   I  A RIF+     +V  ++ +I  +  +   
Sbjct: 59  HAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNY 118

Query: 325 IDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNAL 384
           ++A++L+ RM    + P+ +   S+L+AC +   L  G ++HS  +++G  S+  V   +
Sbjct: 119 LEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRI 178

Query: 385 MDVYAKCGRMENSVELFAESPK----RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQV 440
           M++Y KCG + ++  +F E P+    ++ V W  MI G+V+  E  +A+  F  M  E V
Sbjct: 179 MELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENV 238

Query: 441 PATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARL 500
              E T   VL AC+ L ALE G  VH    K   ++++ V NALI+MY++CGSI +A+ 
Sbjct: 239 RPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQT 298

Query: 501 VFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGL 560
           VFD M D + +++N MISG SM+G S + +++F +M  R  RP N+TFVGVL+ACS+GGL
Sbjct: 299 VFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGL 358

Query: 561 LEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
           ++ G   F SM  +Y +EP IEHY  MV LLGR G L++A  LI  +   P  ++   LL
Sbjct: 359 VDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLL 418

Query: 621 GACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SK 669
            AC +H N+E+G   A+ + D    D  T+VLLS++YA +  W++AA            K
Sbjct: 419 SACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQK 478

Query: 670 EPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDE 729
           EPG S IE    +H F  GD  H     I   LE LN   R  GY P+   VL+D+ + E
Sbjct: 479 EPGCSSIEVNNEIHEFLLGDLRHPQKERIYEKLEELNRLLRLEGYHPEKEVVLQDIEDGE 538

Query: 730 KERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVH 789
           KE  L +HSE+LA+ + L    P + IR++KNLR+C DCH+AIK+I+KI +R+I++RD +
Sbjct: 539 KEWALAMHSERLAICYGLISTEPCTMIRVMKNLRVCYDCHSAIKLIAKITRRKIVVRDRN 598

Query: 790 RFHHFQDGCCSCGDFW 805
           RFH+F++G CSCGD+W
Sbjct: 599 RFHYFENGACSCGDYW 614



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 197/450 (43%), Gaps = 46/450 (10%)

Query: 55  NSHSYATSLQSCIQND---------DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLN 105
           NS+S   SL+S  Q            +   + IH Q+++ G+  D F    LL    K +
Sbjct: 26  NSNSNPKSLKSLDQKQIISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCH 85

Query: 106 RLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLK 165
            +  A+++F      N   +   I G+  S  ++EA+ L+S +  E    + +   + LK
Sbjct: 86  AIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILK 145

Query: 166 VLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF---------- 215
              S         V +   KLG  SN  V   +++ +  CG +  AR+VF          
Sbjct: 146 ACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAK 205

Query: 216 ---------DGLF-NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAH 265
                    DG   N+    AL  F  M+    +PN FT   VL AC  L  + + +  H
Sbjct: 206 DTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVH 265

Query: 266 GCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSI 325
               K   E++L+V  AL+++Y++ G I  A+ +F+EM  +DVI ++ MI+  +    S 
Sbjct: 266 SYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSR 325

Query: 326 DAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI-HSLVVRVGLLSDVFVSNAL 384
            A+ELF  M    + P   TFV VL AC+    +D G +I HS+     +   +     +
Sbjct: 326 QAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCM 385

Query: 385 MDVYAKCGRMENSVELFAE---SPKRNHVTWNTMIVG-----YVQLGEVGKAMIMFSKML 436
           +D+  + GR+E + +L      +P  +H+   T++        ++LGE        +K L
Sbjct: 386 VDLLGRVGRLEEAYDLIRTMKMTP--DHIMLGTLLSACKMHKNLELGE------QVAKEL 437

Query: 437 EEQVPATEVTYSSVLRACASLAALEPGMQV 466
           E++  A   TY  +    AS    +   QV
Sbjct: 438 EDRGQADSGTYVLLSHVYASSGKWKEAAQV 467



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 127/245 (51%), Gaps = 5/245 (2%)

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
           IH+ ++R G   D F+   L+   +KC  ++ +  +F  +   N   +  +I G+V  G 
Sbjct: 58  IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 117

Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA 484
             +A+ ++S+ML E +       +S+L+AC S  AL  G +VH   +K  +  + +V   
Sbjct: 118 YLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLR 177

Query: 485 LIDMYAKCGSITDARLVFDMMND----WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG 540
           ++++Y KCG + DAR VF+ M +     + V W AMI G+  +  +   L+ F  MQ   
Sbjct: 178 IMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRALEAFRGMQGEN 237

Query: 541 WRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKA 600
            RPN  T V VLSACS  G LE G  +  S +  + IE  +    +++++  R G +D+A
Sbjct: 238 VRPNEFTIVCVLSACSQLGALEIGR-WVHSYMRKFEIELNLFVGNALINMYSRCGSIDEA 296

Query: 601 AKLIE 605
             + +
Sbjct: 297 QTVFD 301



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 30/146 (20%), Positives = 65/146 (44%), Gaps = 3/146 (2%)

Query: 464 MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMH 523
           + +H   ++  +  D  +   L+   +KC +I  A  +F   ++ N   + A+I G+   
Sbjct: 56  LPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSS 115

Query: 524 GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG-EAYFKSMVANYGIEPCIE 582
           G   E ++++  M      P+N     +L AC +   L +G E + +++   +     + 
Sbjct: 116 GNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVR 175

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGIP 608
               ++ L G+ G L  A ++ E +P
Sbjct: 176 --LRIMELYGKCGELGDARRVFEEMP 199


>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
 gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g49142
 gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
          Length = 686

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 235/647 (36%), Positives = 345/647 (53%), Gaps = 65/647 (10%)

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMR 234
           N+ +G  L+ A++    V  ARKVFD +                 N  + E +  F  M 
Sbjct: 73  NSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMC 132

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
               +P+++TF  VLKAC    TI + +  HG A K      L+V   L+ +Y K G +S
Sbjct: 133 GCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLS 192

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
            AR + +EM ++DV+ W+ ++  YAQ     DA+E+   M    ++ +  T  S+L A  
Sbjct: 193 EARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA-- 250

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
                               +S+    N +   Y K        ++F +  K++ V+WN 
Sbjct: 251 --------------------VSNTTTENVM---YVK--------DMFFKMGKKSLVSWNV 279

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
           MI  Y++     +A+ ++S+M  +      V+ +SVL AC   +AL  G ++H    +  
Sbjct: 280 MIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKK 339

Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
              ++++ NALIDMYAKCG +  AR VF+ M   + VSW AMIS Y   G   + + +F 
Sbjct: 340 LIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFS 399

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
            +Q  G  P+++ FV  L+ACS+ GLLE+G + FK M  +Y I P +EH   MV LLGRA
Sbjct: 400 KLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRA 459

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLS 654
           G + +A + I+ +  +P+  +W ALLGAC +H++ +IG L+A  +    PE    +VLLS
Sbjct: 460 GKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLS 519

Query: 655 NIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLE 703
           NIYA A  WE           K   K PG S +E   ++H F  GD SH   + I   L+
Sbjct: 520 NIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELD 579

Query: 704 WLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMP-----PSSPIRI 758
            L  K ++ GY+PD  + L DV E++KE +L VHSEKLA+ FAL          ++ IRI
Sbjct: 580 VLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRI 639

Query: 759 IKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            KNLRIC DCH A K+IS+I  REIIIRD +RFH F+ G CSCGD+W
Sbjct: 640 TKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 123/457 (26%), Positives = 215/457 (47%), Gaps = 23/457 (5%)

Query: 71  DLQTAMTIHCQV-LKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTI 129
           D++T  T+H ++ L+   C        L+  Y  L  +  A K+FDE+PERN I     I
Sbjct: 54  DIRTLRTVHSRIILEDLRCNSSLGVK-LMRAYASLKDVASARKVFDEIPERNVIIINVMI 112

Query: 130 QGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHD 189
           + Y  +  + E V +F T+       + + F   LK     G   +   +     K+G  
Sbjct: 113 RSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLS 172

Query: 190 SNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVL 249
           S  FVG  L+  +  CG +  AR V D +      + +++ S +  VG+  N   F   L
Sbjct: 173 STLFVGNGLVSMYGKCGFLSEARLVLDEMSR---RDVVSWNSLV--VGYAQNQ-RFDDAL 226

Query: 250 KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
           + C  +++++++  A   A        L  AV+     T +  +   + +F +M KK ++
Sbjct: 227 EVCREMESVKISHDAGTMA-------SLLPAVS----NTTTENVMYVKDMFFKMGKKSLV 275

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
            W+ MI  Y +  + ++AVEL+ RM      P+  +  SVL AC     L LG +IH  +
Sbjct: 276 SWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYI 335

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAM 429
            R  L+ ++ + NAL+D+YAKCG +E + ++F     R+ V+W  MI  Y   G    A+
Sbjct: 336 ERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAV 395

Query: 430 IMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALID 487
            +FSK+ +  +    + + + L AC+    LE G     L    +Y +   + +   ++D
Sbjct: 396 ALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTD-HYKITPRLEHLACMVD 454

Query: 488 MYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
           +  + G + +A R + DM  + NE  W A++    +H
Sbjct: 455 LLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVH 491



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/371 (25%), Positives = 174/371 (46%), Gaps = 38/371 (10%)

Query: 255 LDT---IRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPW 311
           LDT   IR  ++ H   +      +  + V L+  Y    ++++AR++F+E+P+++VI  
Sbjct: 49  LDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIII 108

Query: 312 SFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR 371
           + MI  Y       + V++F  M    V P+ +TF  VL+AC+    + +G +IH    +
Sbjct: 109 NVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATK 168

Query: 372 VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIM 431
           VGL S +FV N L+ +Y KCG +  +  +  E  +R+ V+WN+++VGY Q      A+ +
Sbjct: 169 VGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEV 228

Query: 432 FSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAK 491
             +M   ++     T +S+L A ++             T   N             MY K
Sbjct: 229 CREMESVKISHDAGTMASLLPAVSN-------------TTTENV------------MYVK 263

Query: 492 CGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGV 551
                    +F  M   + VSWN MI  Y  + +  E ++++  M+  G+ P+ ++   V
Sbjct: 264 D--------MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSV 315

Query: 552 LSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQP 611
           L AC +   L  G+      +    + P +    +++ +  + G L+KA  + E +  + 
Sbjct: 316 LPACGDTSALSLGKK-IHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSR- 373

Query: 612 SVMIWRALLGA 622
            V+ W A++ A
Sbjct: 374 DVVSWTAMISA 384



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 93/369 (25%), Positives = 167/369 (45%), Gaps = 29/369 (7%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           + +++   L++C  +  +     IH    K G    LF  N L+++Y K   L +A  + 
Sbjct: 139 DHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVL 198

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFT-AFLKVLVSMGWA 173
           DEM  R+ +S+ + + GY  + +F +A+ +   +  E  +++  A T A L   VS    
Sbjct: 199 DEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM--ESVKISHDAGTMASLLPAVSNTTT 256

Query: 174 ELCPCVFACVYKLGHDS----NAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNF 229
           E    V    +K+G  S    N  +G  + +A  V                    EA+  
Sbjct: 257 ENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPV--------------------EAVEL 296

Query: 230 FSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK 289
           +S+M A GF+P+  +   VL AC     + + K  HG   +     +L +  AL+D+Y K
Sbjct: 297 YSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAK 356

Query: 290 SGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSV 349
            G +  AR +FE M  +DV+ W+ MI+ Y  +    DAV LF +++ + + P+   FV+ 
Sbjct: 357 CGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTT 416

Query: 350 LQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALM-DVYAKCGRMENSVELFAE-SPKR 407
           L AC+    L+ G     L+     ++      A M D+  + G+++ +     + S + 
Sbjct: 417 LAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEP 476

Query: 408 NHVTWNTMI 416
           N   W  ++
Sbjct: 477 NERVWGALL 485


>gi|449510831|ref|XP_004163774.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 556

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 223/584 (38%), Positives = 328/584 (56%), Gaps = 39/584 (6%)

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           MR  G  PN++TF+ VL AC         +  H    K  +  +++V  AL+D+Y K  +
Sbjct: 1   MRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCD 60

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           +  A ++FEEMP                             + +   A ++ +F SV  A
Sbjct: 61  MLMAEKVFEEMPT---------------------------LLLENLTALDEVSFSSVFSA 93

Query: 353 CATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTW 412
           CA    L+ G Q+H + +++G+ + V+++N+L D+Y KCG   +  +LF+ +  R+ VTW
Sbjct: 94  CANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTW 153

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
           N MI+ YV       A   F  M  +     E +YSSVL +CA+LAAL  G  +H   ++
Sbjct: 154 NIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIR 213

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
           + +  ++ VA++LI MYAKCGS+ DA  +F+   D N V W A+I+    HG +  V+++
Sbjct: 214 SGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVEL 273

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
           F+ M + G +P+ +TFV VLSACS+ G +E+G  YF SM+  +GI P  EHY  +V LL 
Sbjct: 274 FEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLS 333

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVL 652
           RAG LD+A + IE +P +P   +W ALL AC  H+N+ +G+  A  + D EP++   +VL
Sbjct: 334 RAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFDLEPDNPGNYVL 393

Query: 653 LSNIYA----------MARSWEK-AASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGM 701
           L NI            + R  E     KEPG SWI+ +   + F   D SH     I  M
Sbjct: 394 LCNILTRNGMLNEADEVRRKMESIGVRKEPGCSWIDIKNSTYVFTVHDKSHEKTKEIYEM 453

Query: 702 LEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKN 761
           LE L    +K GY+ +    + +  E+ KE+ LW HSEK+ALAF L  +P  +PIRI KN
Sbjct: 454 LEKLKELVKKKGYVAETEFAI-NTAEEYKEQSLWYHSEKIALAFGLLSLPAGAPIRIKKN 512

Query: 762 LRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           LR C DCHT +K  S+I  REII+RD++RFHHF +G CSCGD+W
Sbjct: 513 LRTCGDCHTVMKFASEIFAREIIVRDINRFHHFTNGICSCGDYW 556



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 114/432 (26%), Positives = 203/432 (46%), Gaps = 26/432 (6%)

Query: 148 LHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGC 207
           + R G   N + F+A L        +     + + V+K G  +  FV +AL+D ++ C  
Sbjct: 1   MRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCD 60

Query: 208 VEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGC 267
           +  A KVF+       E        + A+    +  +F+ V  AC     +   K  HG 
Sbjct: 61  MLMAEKVFE-------EMPTLLLENLTAL----DEVSFSSVFSACANAGNLEFGKQVHGV 109

Query: 268 ALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDA 327
           ALK      +Y+  +L D+Y K G  ++  ++F     +DV+ W+ MI  Y       DA
Sbjct: 110 ALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDA 169

Query: 328 VELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDV 387
              F  MR+    P++ ++ SVL +CA +  L  G  IH+ ++R G + ++ V+++L+ +
Sbjct: 170 CNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITM 229

Query: 388 YAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTY 447
           YAKCG + ++ ++F E+  RN V W  +I    Q G     + +F +ML E +    +T+
Sbjct: 230 YAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITF 289

Query: 448 SSVLRACASLAALEPGMQVHCLTVKAN--YDMDVVVANALIDMYAKCGSITDARLVFDMM 505
            SVL AC+    +E G       +K +  Y      A  ++D+ ++ G +  A+   ++M
Sbjct: 290 VSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYA-CIVDLLSRAGELDRAKRFIELM 348

Query: 506 NDWNEVS-WNAMISGYSMHG---LSAEV-LKVFDLMQQRGWRPNNL-TFVGVLSACSNGG 559
               + S W A++S    H    +  EV LK+FDL       P+N   +V + +  +  G
Sbjct: 349 PIKPDASVWGALLSACRNHSNLIMGKEVALKLFDL------EPDNPGNYVLLCNILTRNG 402

Query: 560 LLEQGEAYFKSM 571
           +L + +   + M
Sbjct: 403 MLNEADEVRRKM 414



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/278 (21%), Positives = 115/278 (41%), Gaps = 20/278 (7%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           S+++   +C    +L+    +H   LK G    ++  N L ++Y K     D  KLF   
Sbjct: 86  SFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNT 145

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
             R+ +++   I  Y  +  + +A   F  + R+G   +  ++++ L    ++       
Sbjct: 146 GARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGT 205

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-----------GLFNDCFEEA 226
            +   + + G   N  V ++LI  ++ CG +  A ++F+            +   C +  
Sbjct: 206 LIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHG 265

Query: 227 -----LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT--CYEMDLYV 279
                +  F QM   G KP+  TF  VL AC     +          +K    Y    + 
Sbjct: 266 HANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHY 325

Query: 280 AVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
           A  ++DL +++GE+  A+R  E MP K D   W  +++
Sbjct: 326 A-CIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLS 362


>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 222/596 (37%), Positives = 327/596 (54%), Gaps = 49/596 (8%)

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           EA++ +  M+ +G   NNFT+ FVLK C         +  HG  ++T +  DL+V  AL+
Sbjct: 115 EAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALV 174

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
           D+Y K GEI +A  +F+ M  +DV+ W+ MI  Y Q +  + A+ LF +M++     ++ 
Sbjct: 175 DMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEI 234

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE--LFA 402
           T +SV  A                   VG L D              GRM  S    +F 
Sbjct: 235 TAISVASA-------------------VGQLGD--------------GRMAISRARLVFD 261

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
              +RN ++WN+M+ GY Q G    A+ +F++M   +     VT   ++ AC+ L +   
Sbjct: 262 RMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHL 321

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFD--MMNDWNEVSWNAMISGY 520
           G ++H   + +  D+D  + NA++DMY KCG +  A  +F+   + + +  SWN +ISGY
Sbjct: 322 GRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGY 381

Query: 521 SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPC 580
            +HG   E L++F  MQ  G  PN++TF  +LSACS+ GL+++G   F  M     + P 
Sbjct: 382 GVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMT-KLSVRPE 440

Query: 581 IEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHIL 640
           ++HY  MV +LGRAG L++A +LI+ IP +PS  +W ALL AC IH N E+G ++A ++ 
Sbjct: 441 MKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLF 500

Query: 641 DFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGD 689
             EPE    +VL+SNIYA +  W+           +   K    S IE    VH F   D
Sbjct: 501 QLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTAD 560

Query: 690 TSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFK 749
            S      +   +E L ++ +  GY+PDLS VL DV  ++KE  L  HSEKLA+AF + K
Sbjct: 561 QSSPYYREVYRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMK 620

Query: 750 MPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           M    PI++ KNLR+C DCH A K IS I  R+II+RD +RFHHFQ G CSCGD+W
Sbjct: 621 MDQGMPIQVTKNLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQGGRCSCGDYW 676



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 133/497 (26%), Positives = 224/497 (45%), Gaps = 64/497 (12%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDL--FATNVLLNVYVKLNRLPDATKLF 114
           H Y   LQ C     L T   IH  +  +G  L    F   +++ +Y KL  L  A  LF
Sbjct: 26  HFYDHLLQCCTS---LTTLKLIHSSLSTRGFLLHTPHFLARLII-LYSKLGDLHSARTLF 81

Query: 115 DEMPER--------NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV 166
           D             N+    T ++ Y  + +  EA+ L+  + R G  +N F +   LKV
Sbjct: 82  DHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKV 141

Query: 167 LVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG-LFNDC--- 222
             S   A     V   V + G  S+ FV  AL+D ++ CG +  A +VFD  L  D    
Sbjct: 142 CASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCW 201

Query: 223 ------FEE------ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALK 270
                 +E+      AL  F +M+  GF  +  T   V  A   L   R+A         
Sbjct: 202 TAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMA--------- 252

Query: 271 TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVEL 330
                                 IS AR +F+ M +++ I W+ M++ Y Q     DA+ L
Sbjct: 253 ----------------------ISRARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSL 290

Query: 331 FCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAK 390
           F +M+ +   PN  T + ++ AC+ +    LG ++H+ V+   +  D  + NA+MD+Y K
Sbjct: 291 FNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMK 350

Query: 391 CGRMENSVELF--AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYS 448
           CG ++ +VE+F   E  +R+  +WN +I GY   G   +A+ +FS+M  E V   ++T++
Sbjct: 351 CGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFT 410

Query: 449 SVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMND 507
           S+L AC+    ++ G +      K +   ++     ++DM  + G + +A RL+  + + 
Sbjct: 411 SILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSR 470

Query: 508 WNEVSWNAMISGYSMHG 524
            ++  W A++    +HG
Sbjct: 471 PSDEVWGALLLACRIHG 487



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 202/438 (46%), Gaps = 54/438 (12%)

Query: 225 EALNFFSQMRAVGFKPN-NFTFAFVLKACLGLDTIRVAKSA---HGCALKTCYEMDLYVA 280
            AL+  S    V   P+ +  +  +L+ C  L T+++  S+    G  L T + +     
Sbjct: 7   RALHHLSHTHKVLALPSLHHFYDHLLQCCTSLTTLKLIHSSLSTRGFLLHTPHFL----- 61

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVI----PWSF----MIARYAQTDLSIDAVELFC 332
             L+ LY+K G++ +AR +F+            P SF    M+  YA    S +A++L+ 
Sbjct: 62  ARLIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYI 121

Query: 333 RMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCG 392
            M++  V  N FT+  VL+ CA+  G   G  +H  VVR G  SD+FV  AL+D+YAKCG
Sbjct: 122 YMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCG 181

Query: 393 RMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLR 452
            + ++ E+F     R+ V W  MI  Y Q     KA+++F KM EE     E+T  SV  
Sbjct: 182 EIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVAS 241

Query: 453 ACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS 512
           A   L                    D  +A            I+ ARLVFD M + N +S
Sbjct: 242 AVGQLG-------------------DGRMA------------ISRARLVFDRMEERNGIS 270

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
           WN+M+SGY+ +G   + L +F+ MQ     PN +T + ++SACS  G    G      ++
Sbjct: 271 WNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVI 330

Query: 573 AN-YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF-QPSVMIWRALLGACIIHNNVE 630
           ++   I+  +    +++ +  + G LD A ++       +  V  W  L+    +H + +
Sbjct: 331 SSKMDIDTTLR--NAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGK 388

Query: 631 --IGRLSAQHILDFEPED 646
             +   S   +   EP D
Sbjct: 389 EALELFSRMQVEGVEPND 406



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 86/379 (22%), Positives = 172/379 (45%), Gaps = 23/379 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N+ +Y   L+ C           +H QV++ G   DLF    L+++Y K   + DA ++F
Sbjct: 131 NNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVF 190

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D M  R+ + +   I  Y  + + ++A+ LF  +  EG   +     +    +  +G   
Sbjct: 191 DRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGR 250

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMR 234
           +       V+    + N     +++  ++  G     R            +AL+ F+QM+
Sbjct: 251 MAISRARLVFDRMEERNGISWNSMLSGYTQNG-----RPT----------DALSLFNQMQ 295

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
           A    PN  T   ++ AC  L +  + +  H   + +  ++D  +  A++D+Y K G++ 
Sbjct: 296 ASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLD 355

Query: 295 NARRIFE--EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
            A  +F   E+ ++DV  W+ +I+ Y       +A+ELF RM+   V PN  TF S+L A
Sbjct: 356 TAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSA 415

Query: 353 CATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKR-NHVT 411
           C+    +D G +  + + ++ +  ++     ++D+  + G +  +  L  + P R +   
Sbjct: 416 CSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEV 475

Query: 412 WNTMIV-----GYVQLGEV 425
           W  +++     G  +LGE+
Sbjct: 476 WGALLLACRIHGNTELGEI 494


>gi|225428400|ref|XP_002283651.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
           [Vitis vinifera]
 gi|297744424|emb|CBI37686.3| unnamed protein product [Vitis vinifera]
          Length = 571

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 213/533 (39%), Positives = 314/533 (58%), Gaps = 15/533 (2%)

Query: 288 TKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM--RQAFVAPNQFT 345
           + +G+++ A  I   +  ++    + MI  Y+QT     A+ LF  M  +     P++FT
Sbjct: 39  SPAGDLTYAHLILNSLSTQNSFFHNTMIRAYSQTPDPTQALHLFLSMLCQPTSPRPDKFT 98

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           +  +L++CA ++   +G Q+H L+ + GL SD +VSN L+ +Y+ CG+   + ++F +  
Sbjct: 99  YPFLLKSCARLKQPRVGKQLHGLIYKSGLESDRYVSNGLIHMYSSCGKSGRAYKVFGKMR 158

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
            R+ V+W +MI G+V      +A+ +F +M+E+ V   E T  SVLRACA   A+  G +
Sbjct: 159 DRDVVSWTSMIDGFVDDDRALEAIRLFEEMVEDGVEPNEATVVSVLRACADAGAVGMGRR 218

Query: 466 VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGL 525
           V  +  +    ++  V  ALIDMYAKCGSI  AR VFD + + +  +W AMISG + HGL
Sbjct: 219 VQGVIEERKIGLEANVRTALIDMYAKCGSIGSARKVFDGIVNKDVFAWTAMISGLANHGL 278

Query: 526 SAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYT 585
             E + +FD M+  G RP+  T   VLSAC N G   +G AYF SM   YGI+P I+HY 
Sbjct: 279 CEEAVTLFDQMESFGLRPDERTMTAVLSACRNAGWFSEGFAYFNSMWCKYGIKPTIQHYG 338

Query: 586 SMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGR--LSAQHILDFE 643
            MV LL R GHLD+A + I  +P +P V++WR L+ A  +H +++     +  + +L  +
Sbjct: 339 CMVDLLARTGHLDEAEEFIRKMPIEPDVVLWRTLIWASKVHGDIDRSEQLMKDRGLLKMD 398

Query: 644 PEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSH 692
            +D  ++VLL N+YA A  W           +K  SK PG S IE  G+VH F AGD+ H
Sbjct: 399 SDDCGSYVLLGNVYASAGKWHDKAKMRELMNQKGLSKPPGCSRIEVDGLVHEFAAGDSGH 458

Query: 693 ADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPP 752
            +   I   L+ +  + +  GY P LS VL ++   EK   L  HSEKLA+AF L K  P
Sbjct: 459 IEAEKIYAKLDEVEERLKAEGYHPKLSEVLLEIDNKEKAFQLRHHSEKLAVAFGLIKTSP 518

Query: 753 SSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            + IRI+KNLR C DCH+ +K+ISKI Q++II+RD  RFHHF +G CSC D+W
Sbjct: 519 GTEIRIVKNLRSCEDCHSVLKLISKIYQQDIIVRDRIRFHHFINGDCSCKDYW 571



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 161/320 (50%), Gaps = 7/320 (2%)

Query: 225 EALNFFSQM--RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
           +AL+ F  M  +    +P+ FT+ F+LK+C  L   RV K  HG   K+  E D YV+  
Sbjct: 77  QALHLFLSMLCQPTSPRPDKFTYPFLLKSCARLKQPRVGKQLHGLIYKSGLESDRYVSNG 136

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+ +Y+  G+   A ++F +M  +DV+ W+ MI  +   D +++A+ LF  M +  V PN
Sbjct: 137 LIHMYSSCGKSGRAYKVFGKMRDRDVVSWTSMIDGFVDDDRALEAIRLFEEMVEDGVEPN 196

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           + T VSVL+ACA    + +G ++  ++    +  +  V  AL+D+YAKCG + ++ ++F 
Sbjct: 197 EATVVSVLRACADAGAVGMGRRVQGVIEERKIGLEANVRTALIDMYAKCGSIGSARKVFD 256

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
               ++   W  MI G    G   +A+ +F +M    +   E T ++VL AC +      
Sbjct: 257 GIVNKDVFAWTAMISGLANHGLCEEAVTLFDQMESFGLRPDERTMTAVLSACRNAGWFSE 316

Query: 463 GMQ-VHCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGY 520
           G    + +  K      +     ++D+ A+ G + +A   +  M  + + V W  +I   
Sbjct: 317 GFAYFNSMWCKYGIKPTIQHYGCMVDLLARTGHLDEAEEFIRKMPIEPDVVLWRTLIWAS 376

Query: 521 SMHGLSAEVLKVFDLMQQRG 540
            +HG   ++ +   LM+ RG
Sbjct: 377 KVHG---DIDRSEQLMKDRG 393



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 95/380 (25%), Positives = 168/380 (44%), Gaps = 23/380 (6%)

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK---LFDEMPERNTISFVTT 128
           L  AM +H Q+LK  +          L  +  L+   D T    + + +  +N+    T 
Sbjct: 6   LSQAMQLHAQILKSPDPKKQTRNLTPLFTFAALSPAGDLTYAHLILNSLSTQNSFFHNTM 65

Query: 129 IQGYTVSSQFVEAVGLFSTLHREGHELNP--FAFTAFLKVLVSMGWAELCPCVFACVYKL 186
           I+ Y+ +    +A+ LF ++  +     P  F +   LK    +    +   +   +YK 
Sbjct: 66  IRAYSQTPDPTQALHLFLSMLCQPTSPRPDKFTYPFLLKSCARLKQPRVGKQLHGLIYKS 125

Query: 187 GHDSNAFVGTALIDAFSVCGCVEFARKVF---------------DGLFNDCFE-EALNFF 230
           G +S+ +V   LI  +S CG    A KVF               DG  +D    EA+  F
Sbjct: 126 GLESDRYVSNGLIHMYSSCGKSGRAYKVFGKMRDRDVVSWTSMIDGFVDDDRALEAIRLF 185

Query: 231 SQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKS 290
            +M   G +PN  T   VL+AC     + + +   G   +    ++  V  AL+D+Y K 
Sbjct: 186 EEMVEDGVEPNEATVVSVLRACADAGAVGMGRRVQGVIEERKIGLEANVRTALIDMYAKC 245

Query: 291 GEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVL 350
           G I +AR++F+ +  KDV  W+ MI+  A   L  +AV LF +M    + P++ T  +VL
Sbjct: 246 GSIGSARKVFDGIVNKDVFAWTAMISGLANHGLCEEAVTLFDQMESFGLRPDERTMTAVL 305

Query: 351 QACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRN 408
            AC        G    +S+  + G+   +     ++D+ A+ G ++ + E   + P + +
Sbjct: 306 SACRNAGWFSEGFAYFNSMWCKYGIKPTIQHYGCMVDLLARTGHLDEAEEFIRKMPIEPD 365

Query: 409 HVTWNTMIVGYVQLGEVGKA 428
            V W T+I      G++ ++
Sbjct: 366 VVLWRTLIWASKVHGDIDRS 385



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 84/337 (24%), Positives = 141/337 (41%), Gaps = 63/337 (18%)

Query: 17  HQSKINAWLRGLSAQAALS---TQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQ 73
           H + I A+ +      AL    +  C  ++  P  F+        Y   L+SC +    +
Sbjct: 62  HNTMIRAYSQTPDPTQALHLFLSMLCQPTSPRPDKFT--------YPFLLKSCARLKQPR 113

Query: 74  TAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYT 133
               +H  + K G   D + +N L+++Y    +   A K+F +M +R+ +S+ + I G+ 
Sbjct: 114 VGKQLHGLIYKSGLESDRYVSNGLIHMYSSCGKSGRAYKVFGKMRDRDVVSWTSMIDGFV 173

Query: 134 VSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACV--YKLGHDSN 191
              + +EA+ LF  +  +G E N     + L+     G   +   V   +   K+G ++N
Sbjct: 174 DDDRALEAIRLFEEMVEDGVEPNEATVVSVLRACADAGAVGMGRRVQGVIEERKIGLEAN 233

Query: 192 AFVGTALIDAFSVCGCVEFARKVFDGLFN-DCF---------------EEALNFFSQMRA 235
             V TALID ++ CG +  ARKVFDG+ N D F               EEA+  F QM +
Sbjct: 234 --VRTALIDMYAKCGSIGSARKVFDGIVNKDVFAWTAMISGLANHGLCEEAVTLFDQMES 291

Query: 236 VGFKPNNFTFAFVLKACLGLD----------------TIRVAKSAHGCALKTCYEMDLYV 279
            G +P+  T   VL AC                     I+     +GC            
Sbjct: 292 FGLRPDERTMTAVLSACRNAGWFSEGFAYFNSMWCKYGIKPTIQHYGC------------ 339

Query: 280 AVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMI 315
              ++DL  ++G +  A     +MP + DV+ W  +I
Sbjct: 340 ---MVDLLARTGHLDEAEEFIRKMPIEPDVVLWRTLI 373


>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 222/583 (38%), Positives = 330/583 (56%), Gaps = 50/583 (8%)

Query: 269 LKTCYEMDLYVA---VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSI 325
           L+TC  +D + A   VA   L+  SG +  AR +F ++P       + +I  Y   +L  
Sbjct: 2   LRTCLFVDPFSASKIVAFCALH-DSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPR 60

Query: 326 DAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALM 385
            A+  +  M    + P++FTF S+ ++C     L  G Q+H    ++G  SD ++ N LM
Sbjct: 61  QAILFYQLMMLQGLDPDRFTFPSLFKSCGV---LCEGKQLHCHSTKLGFASDAYIQNTLM 117

Query: 386 DVYAKCGRMENSVELFAESPKRNHVTW--------------------------------N 413
           ++Y+ CG + ++ ++F +   ++ V+W                                N
Sbjct: 118 NMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWN 177

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
            MI G+V+  +  +A+ +F++M    V   +VT +S+L AC  L ALE G  +H    K 
Sbjct: 178 IMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKE 237

Query: 474 NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVF 533
             ++DV +  AL+DMYAKCGSI  A  VF  M + + ++W A+I G +M G   + L++F
Sbjct: 238 KIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELF 297

Query: 534 DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGR 593
             MQ    +P+ +TFVGVL+ACS+ GL+ +G AYF SM   YGI+P IEHY  MV +LGR
Sbjct: 298 HEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGR 357

Query: 594 AGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLL 653
           AG + +A  LI+ +P  P   +   LL AC IH N+ +   +AQ +++ +P++  T+VLL
Sbjct: 358 AGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLL 417

Query: 654 SNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGML 702
           SNIY+  ++WE A             K PG S IE  G+VH F  GD SH   + I   L
Sbjct: 418 SNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETL 477

Query: 703 EWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNL 762
           + +  + + AGY+PD S VL D+ E EKE  L +HSEKLA+AF L    P +PIR++KNL
Sbjct: 478 DDMMRRLKSAGYVPDKSEVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNL 537

Query: 763 RICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           R+C DCH+A+K IS++  REII+RD +RFHHF  G CSC DFW
Sbjct: 538 RVCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSCSCRDFW 580



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 181/415 (43%), Gaps = 84/415 (20%)

Query: 206 GCVEFARKVFDGLFN----------------DCFEEALNFFSQMRAVGFKPNNFTFAFVL 249
           G + +AR VF+ + N                +   +A+ F+  M   G  P+ FTF  + 
Sbjct: 26  GSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLF 85

Query: 250 KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
           K+C     +   K  H  + K  +  D Y+   L+++Y+  G + +AR++F++M  K V+
Sbjct: 86  KSC---GVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVV 142

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAF------------------------------- 338
            W+ MI  YAQ DL  +A++LF RM  A                                
Sbjct: 143 SWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLS 202

Query: 339 -VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            V  ++ T  S+L AC  +  L+LG  +H  + +  +  DV +  AL+D+YAKCG +E++
Sbjct: 203 GVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESA 262

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
           + +F E P+++ +TW  +IVG    G+  KA+ +F +M   +V    +T+  VL AC+  
Sbjct: 263 MRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHA 322

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
             +  G               +   N++ + Y    SI     + DM+            
Sbjct: 323 GLVNEG---------------IAYFNSMPNKYGIQPSIEHYGCMVDML------------ 355

Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
                 G +  + +  DL+Q     P+    VG+LSAC   G L   E   + ++
Sbjct: 356 ------GRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLI 404



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 160/348 (45%), Gaps = 52/348 (14%)

Query: 107 LPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV 166
           LP A  +F+++P   T +  + I+GYT  +   +A+  +  +  +G + + F F +  K 
Sbjct: 28  LPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKS 87

Query: 167 LVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDC---- 222
              +   +   C      KLG  S+A++   L++ +S CGC+  ARKVFD + N      
Sbjct: 88  CGVLCEGKQLHCHST---KLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSW 144

Query: 223 --------------------------------------------FEEALNFFSQMRAVGF 238
                                                       +EEAL+ F++M+  G 
Sbjct: 145 ATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGV 204

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
           K +  T A +L AC  L  + + K  H    K   E+D+ +  AL+D+Y K G I +A R
Sbjct: 205 KGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMR 264

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           +F+EMP+KDV+ W+ +I   A     + A+ELF  M+ + V P+  TFV VL AC+    
Sbjct: 265 VFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGL 324

Query: 359 LDLG-NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           ++ G    +S+  + G+   +     ++D+  + GR+  + +L    P
Sbjct: 325 VNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMP 372



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 129/286 (45%), Gaps = 39/286 (13%)

Query: 369 VVRVGLLSDVFVSNALMDVYA--KCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVG 426
           ++R  L  D F ++ ++   A    G +  +  +F + P     T N++I GY       
Sbjct: 1   MLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPR 60

Query: 427 KAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALI 486
           +A++ +  M+ + +     T+ S+ ++C  L     G Q+HC + K  +  D  + N L+
Sbjct: 61  QAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCE---GKQLHCHSTKLGFASDAYIQNTLM 117

Query: 487 DMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK--------------- 531
           +MY+ CG +  AR VFD M + + VSW  MI  Y+   L  E +K               
Sbjct: 118 NMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWN 177

Query: 532 -----------------VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
                            +F+ MQ  G + + +T   +L AC++ G LE G+ +    +  
Sbjct: 178 IMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGK-WLHVYIEK 236

Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
             IE  +   T++V +  + G ++ A ++ + +P +  VM W AL+
Sbjct: 237 EKIEVDVALGTALVDMYAKCGSIESAMRVFQEMP-EKDVMTWTALI 281



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 62/277 (22%), Positives = 111/277 (40%), Gaps = 51/277 (18%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTI-------- 129
           +HC   K G   D +  N L+N+Y     L  A K+FD+M  ++ +S+ T I        
Sbjct: 97  LHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDL 156

Query: 130 ------------------------QGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLK 165
                                    G+   S + EA+ LF+ +   G + +     + L 
Sbjct: 157 PHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLI 216

Query: 166 VLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND---- 221
               +G  EL   +   + K   + +  +GTAL+D ++ CG +E A +VF  +       
Sbjct: 217 ACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMT 276

Query: 222 ----------CFE--EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCAL 269
                     C +  +AL  F +M+    KP+  TF  VL AC     +     A+  ++
Sbjct: 277 WTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEG-IAYFNSM 335

Query: 270 KTCYEMDLYVA--VALLDLYTKSGEISNARRIFEEMP 304
              Y +   +     ++D+  ++G I+ A  + + MP
Sbjct: 336 PNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMP 372



 Score = 46.2 bits (108), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 59/118 (50%), Gaps = 3/118 (2%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           + A+ L +C     L+    +H  + K+   +D+     L+++Y K   +  A ++F EM
Sbjct: 210 TMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEM 269

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAEL 175
           PE++ +++   I G  +  Q ++A+ LF  +     E+ P A T F+ VL +   A L
Sbjct: 270 PEKDVMTWTALIVGLAMCGQGLKALELFHEMQMS--EVKPDAIT-FVGVLAACSHAGL 324


>gi|356509996|ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130-like [Glycine max]
          Length = 586

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 210/577 (36%), Positives = 337/577 (58%), Gaps = 19/577 (3%)

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
           +L  C     +   K  HG   K  +++   V  +++D+Y+K G +  A R+F  +P ++
Sbjct: 10  ILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLPVRN 69

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
           VI W+ MIA Y       +A+ LF  MR+    P+ +T+ S L+AC+  +    G QIH+
Sbjct: 70  VISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIHA 129

Query: 368 LVVRVGL--LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEV 425
            ++R G   L+   V+ AL+D+Y KC RM  + ++F    +++ ++W+T+I+GY Q   +
Sbjct: 130 ALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQEDNL 189

Query: 426 GKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM-DVVVANA 484
            +AM +F ++ E +        SS++   A  A LE G Q+H  T+K  Y + ++ VAN+
Sbjct: 190 KEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEMSVANS 249

Query: 485 LIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPN 544
           ++DMY KCG   +A  +F  M + N VSW  MI+GY  HG+  + +++F+ MQ+ G  P+
Sbjct: 250 VLDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQENGIEPD 309

Query: 545 NLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLI 604
           ++T++ VLSACS+ GL+++G+ YF  + +N  I+P +EHY  MV LLGR G L +A  LI
Sbjct: 310 SVTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGRLKEAKNLI 369

Query: 605 EGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE 664
           E +P +P+V IW+ LL  C +H +VE+G+   + +L  E  + A +V++SN+YA A  W+
Sbjct: 370 EKMPLKPNVGIWQTLLSVCRMHGDVEMGKQVGEILLRREGNNPANYVMVSNMYAHAGYWK 429

Query: 665 -----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKA- 712
                      K   KE G SW+E    +H F  GD  H  +  I  +L+ +  + ++  
Sbjct: 430 ESEKIRETLKRKGLKKEAGRSWVEMDKEIHIFYNGDGMHPLIEEIHEVLKEMEKRVKEEM 489

Query: 713 GYIPDLSAVLRDVREDEKERYLWVHSEKLALAFAL----FKMPPSSPIRIIKNLRICVDC 768
           GY+  ++  L DV E+ K   L VHSEKLA+   L     K+     IRI KNLR+C DC
Sbjct: 490 GYVHSINFSLHDVEEESKMESLRVHSEKLAIGLVLVRRGLKLKGERVIRIFKNLRVCGDC 549

Query: 769 HTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           H  IK +SK+++   ++RD +RFH F++G CSCGD+W
Sbjct: 550 HAFIKGLSKVLKIAFVVRDANRFHRFENGLCSCGDYW 586



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/395 (24%), Positives = 183/395 (46%), Gaps = 27/395 (6%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L  C +   L     +H  V K G  +     N ++++Y K   + +A ++F+ +P RN 
Sbjct: 11  LNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLPVRNV 70

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           IS+   I GYT      EA+ LF  +  +G   + + +++ LK       A     + A 
Sbjct: 71  ISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIHAA 130

Query: 183 VYKLG--HDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFE 224
           + + G  + + + V  AL+D +  C  +  ARKVFD +                  D  +
Sbjct: 131 LIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQEDNLK 190

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE-MDLYVAVAL 283
           EA++ F ++R    + + F  + ++        +   K  H   +K  Y  +++ VA ++
Sbjct: 191 EAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEMSVANSV 250

Query: 284 LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
           LD+Y K G    A  +F EM +++V+ W+ MI  Y +  +   AVELF  M++  + P+ 
Sbjct: 251 LDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQENGIEPDS 310

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALM-DVYAKCGRMENSVELFA 402
            T+++VL AC+    +  G +  S++     +       A M D+  + GR++ +  L  
Sbjct: 311 VTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGRLKEAKNLIE 370

Query: 403 ESP-KRNHVTWNTMIV-----GYVQLG-EVGKAMI 430
           + P K N   W T++      G V++G +VG+ ++
Sbjct: 371 KMPLKPNVGIWQTLLSVCRMHGDVEMGKQVGEILL 405



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/331 (22%), Positives = 140/331 (42%), Gaps = 40/331 (12%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKG--NCLDLFATNVLLNVYVKLNRLPDATK 112
           + ++Y++SL++C   D     M IH  +++ G            L+++YVK  R+ +A K
Sbjct: 104 DGYTYSSSLKACSCADAAGEGMQIHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARK 163

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +FD + E++ +S+ T I GY       EA+ LF  L    H ++ F  ++ + V      
Sbjct: 164 VFDRIEEKSVMSWSTLILGYAQEDNLKEAMDLFRELRESRHRMDGFVLSSIIGVFADFAL 223

Query: 173 AELCPCVFACVYKLGHD-SNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFE------- 224
            E    + A   K+ +      V  +++D +  CG    A    D LF +  E       
Sbjct: 224 LEQGKQMHAYTIKVPYGLLEMSVANSVLDMYMKCGLTVEA----DALFREMLERNVVSWT 279

Query: 225 -------------EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT 271
                        +A+  F++M+  G +P++ T+  VL AC     I+  K         
Sbjct: 280 VMITGYGKHGIGNKAVELFNEMQENGIEPDSVTYLAVLSACSHSGLIKEGKKYFSI---L 336

Query: 272 CYEMDLYVAVA----LLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA---RYAQTDL 323
           C    +   V     ++DL  + G +  A+ + E+MP K +V  W  +++    +   ++
Sbjct: 337 CSNQKIKPKVEHYACMVDLLGRGGRLKEAKNLIEKMPLKPNVGIWQTLLSVCRMHGDVEM 396

Query: 324 SIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
                E+   +R+    P  +  VS + A A
Sbjct: 397 GKQVGEIL--LRREGNNPANYVMVSNMYAHA 425



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 93/176 (52%), Gaps = 6/176 (3%)

Query: 448 SSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND 507
           + +L  C+    L+ G QVH +  K  +D+  VV N++IDMY+KCG + +A  VF+ +  
Sbjct: 8   NKILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLPV 67

Query: 508 WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAY 567
            N +SWNAMI+GY+      E L +F  M+++G  P+  T+   L ACS      +G   
Sbjct: 68  RNVISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQI 127

Query: 568 FKSMVAN---YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
             +++ +   Y  +  +    ++V L  +   + +A K+ + I  + SVM W  L+
Sbjct: 128 HAALIRHGFPYLAQSAVA--GALVDLYVKCRRMAEARKVFDRIE-EKSVMSWSTLI 180


>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 679

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 223/583 (38%), Positives = 333/583 (57%), Gaps = 26/583 (4%)

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR 297
           + P+NFT   V+K C  L  ++  K  HG ALK  +  D++V  +L+++Y+K GEI  AR
Sbjct: 108 YLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCAR 167

Query: 298 RIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM--RQAFVAPNQFTFVSVLQACAT 355
           ++F+ M  KDV+ W+ +I  YA+      A++LF  M  R AF   +    V  L  C  
Sbjct: 168 KVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMPERDAF---SWTVLVDGLSKCGK 224

Query: 356 ME-GLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
           +E    L +Q+           ++   NA+++ Y K G  ++++ELF + P  + VTWN 
Sbjct: 225 VESARKLFDQMPC--------RNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNL 276

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
           MI GY   G+   A+ MF  ML+     +  T  SVL A + LA L  G  +H    K  
Sbjct: 277 MIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNG 336

Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
           +++D ++  +LI+MYAKCG I  A  VF  +       W A+I G  +HG++   L +F 
Sbjct: 337 FELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFL 396

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
            M + G +PN + F+GVL+AC++ GL++ G  YF  M+  Y IEP +EHY  +V +L RA
Sbjct: 397 EMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRA 456

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLS 654
           GHL++A   IE +P  P+ +IW +LLG    H  ++IG  +AQ +++  PE    ++LLS
Sbjct: 457 GHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLS 516

Query: 655 NIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLE 703
           N+YA +  WEK +            K+PG S +E++G +H F  GD SH     I   + 
Sbjct: 517 NMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMS 576

Query: 704 WLNMKSRKAGYIPDLSAVLRDVR-EDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNL 762
            +  K +  G++PD + VL  +  E EKE  L  HSE+LA+AF L  + P  PIRI+KNL
Sbjct: 577 EMKEKLKCVGHVPDTTQVLLCIEGEKEKEAELENHSERLAIAFGLINVKPGIPIRIMKNL 636

Query: 763 RICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           R+C DCH+  K++SKI  REII+RD  RFHHF++G CSC D+W
Sbjct: 637 RVCNDCHSVTKLLSKIYSREIIVRDNCRFHHFKNGSCSCMDYW 679



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 195/377 (51%), Gaps = 13/377 (3%)

Query: 253 LGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYT--KSGEISNARRIFEEMPKKDVIP 310
           +GL   +  +  H  +LKT      +V+  LL LY+  K  ++  AR IF+ + ++ +I 
Sbjct: 21  MGLCAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIH 80

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV 370
           W+ +I  Y +   S D + LF  +   ++ P+ FT   V++ CA +  +  G QIH L +
Sbjct: 81  WNTIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQIHGLAL 139

Query: 371 RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMI 430
           ++G  SDVFV  +L+++Y+KCG ++ + ++F     ++ V WN++I GY + GE+  A+ 
Sbjct: 140 KIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQ 199

Query: 431 MFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYA 490
           +F +M E    +  V    + +     +A +   Q+ C         ++V  NA+I+ Y 
Sbjct: 200 LFEEMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPC--------RNLVSWNAMINGYM 251

Query: 491 KCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVG 550
           K G    A  +F  M  W+ V+WN MI+GY ++G   + +K+F +M + G RP++ T V 
Sbjct: 252 KSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVS 311

Query: 551 VLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQ 610
           VLSA S   +L +G  +  S +   G E      TS++ +  + G ++ A  +   I  +
Sbjct: 312 VLSAVSGLAVLGKGR-WIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQ-K 369

Query: 611 PSVMIWRALLGACIIHN 627
             V  W A++    IH 
Sbjct: 370 KKVGHWTAIIVGLGIHG 386



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 217/462 (46%), Gaps = 47/462 (10%)

Query: 92  FATNVLLNVYV--KLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFV-EAVGLFSTL 148
           F ++ LL +Y   K+N L  A  +FD +  R+ I + T I+ Y V +QF  + + LF   
Sbjct: 46  FVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCY-VENQFSHDGIVLF--- 101

Query: 149 HREGHELNPFAFT--AFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCG 206
           H   HE  P  FT    +K    +G  +    +     K+G  S+ FV  +L++ +S CG
Sbjct: 102 HELVHEYLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCG 161

Query: 207 CVEFARKVFDGLFND--------------CFE--EALNFFSQMRAVGFKPNNFTFAFV-- 248
            ++ ARKVFDG+ +               C E   AL  F +M      P    F++   
Sbjct: 162 EIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEM------PERDAFSWTVL 215

Query: 249 ---LKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPK 305
              L  C  +++ R       C        +L    A+++ Y KSG+  +A  +F +MP 
Sbjct: 216 VDGLSKCGKVESARKLFDQMPCR-------NLVSWNAMINGYMKSGDFDSALELFYQMPI 268

Query: 306 KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
            D++ W+ MIA Y      +DAV++F  M +    P+  T VSVL A + +  L  G  I
Sbjct: 269 WDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWI 328

Query: 366 HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEV 425
           HS + + G   D  +  +L+++YAKCG +E+++ +F    K+    W  +IVG    G  
Sbjct: 329 HSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMA 388

Query: 426 GKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN-- 483
             A+ +F +M +  +    + +  VL AC     ++ G Q   + +   Y ++  + +  
Sbjct: 389 NHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMN-EYKIEPTLEHYG 447

Query: 484 ALIDMYAKCGSITDAR-LVFDMMNDWNEVSWNAMISGYSMHG 524
            L+D+  + G + +A+  + +M    N+V W +++ G   HG
Sbjct: 448 CLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHG 489



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 95/386 (24%), Positives = 166/386 (43%), Gaps = 36/386 (9%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           ++ C +   +Q    IH   LK G   D+F    L+N+Y K   +  A K+FD M +++ 
Sbjct: 119 IKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDV 178

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVF-- 180
           + + + I GY    +   A+ LF     E  E + F++T  +  L   G  E    +F  
Sbjct: 179 VLWNSLIDGYARCGEIDIALQLF----EEMPERDAFSWTVLVDGLSKCGKVESARKLFDQ 234

Query: 181 -ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCF 223
             C        N     A+I+ +   G  + A ++F  +                 N  F
Sbjct: 235 MPC-------RNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQF 287

Query: 224 EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
            +A+  F  M  +G +P++ T   VL A  GL  +   +  H    K  +E+D  +  +L
Sbjct: 288 MDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSL 347

Query: 284 LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
           +++Y K G I +A  +F  + KK V  W+ +I       ++  A+ LF  M +  + PN 
Sbjct: 348 IEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNA 407

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVS-NALMDVYAKCGRME---NSVE 399
             F+ VL AC     +D G Q   +++    +         L+D+  + G +E   N++E
Sbjct: 408 IIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIE 467

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEV 425
               SP  N V W +++ G    G++
Sbjct: 468 NMPISP--NKVIWMSLLGGSRNHGKI 491


>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial [Vitis vinifera]
          Length = 676

 Score =  407 bits (1047), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 207/532 (38%), Positives = 313/532 (58%), Gaps = 13/532 (2%)

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV--APNQF 344
           Y  +G + +  R+F+EMP ++VI W+ MI    Q   S +A+ LF +M    V   P   
Sbjct: 145 YCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSS 204

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           T+  V+ ACA    L  G QIH+ V ++G   D ++S AL+  YA C +ME+S+ +F   
Sbjct: 205 TYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGK 264

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
              N V W  ++ GY    +   A+ +F +M+ E V   + +++S L +C  L AL+ G 
Sbjct: 265 LHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGR 324

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
           ++H   VK   + DV V N+LI MY +CG++ D  ++F  ++  N VSWN++I G + HG
Sbjct: 325 EIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHG 384

Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY 584
                L  F+ M +    P+ +TF G+LSACS+ G+ ++G   FK    N   E  ++HY
Sbjct: 385 CGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHY 444

Query: 585 TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEP 644
             MV +LGR+G L++A +LI  +P + + M+W  LL AC +H+ +E+   +A+ I+D EP
Sbjct: 445 ACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEP 504

Query: 645 EDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHA 693
              + +VLLSN+YA A  W           ++  +K+PG SWI  +G  + F +GD SH 
Sbjct: 505 HCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHP 564

Query: 694 DMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPS 753
             + I   LEWL  K ++ GY+PD    L DV +++KE  L  HSE+LA+ F L      
Sbjct: 565 SSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLISTVEG 624

Query: 754 SPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           S I ++KNLR+C DCH+AIK+I+KIV+R+II+RD  RFHHF DG CSCGD+W
Sbjct: 625 STITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 676



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 130/495 (26%), Positives = 233/495 (47%), Gaps = 38/495 (7%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           ++F + SY + +   ++N  +  A T    V  K +  D++   +++  Y +  R   A 
Sbjct: 7   TKFCTFSYQSMITDHLRNQRIDEART----VFDKVSFPDVYLYTMMITGYARNYRFDHAL 62

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
           +LF EMP ++ +S+ + I+G    +    A  LF     E  E +  ++T  +   +  G
Sbjct: 63  QLFYEMPVKDVVSWNSMIKGCFDCADLTMARKLFD----EMPERSVVSWTTMINGFLQFG 118

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL------------- 218
             E+   +F   YK+     A    ++I  +   G VE   ++F  +             
Sbjct: 119 KIEVAEGLF---YKMPFRDIA-AWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIG 174

Query: 219 ---FNDCFEEALNFFSQMRAVGF--KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY 273
               +   EEAL  F QM   G   KP + T+  V+ AC     +      H    K  Y
Sbjct: 175 GLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGY 234

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
             D Y++ AL+  Y    ++ ++ R+F      +V+ W+ ++  Y       DA+++F  
Sbjct: 235 SFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGE 294

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           M +  V PNQ +F S L +C  +E LD G +IH+  V++GL +DVFV N+L+ +Y +CG 
Sbjct: 295 MMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGN 354

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           + + V +F    K+N V+WN++IVG  Q G    A+  F++M+   V   E+T++ +L A
Sbjct: 355 LNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSA 414

Query: 454 CASLAALEPGMQVHCL--TVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDW 508
           C+     + G    CL      N   +V + +   ++D+  + G + +A  L+ +M    
Sbjct: 415 CSHSGMSQKG---RCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKA 471

Query: 509 NEVSWNAMISGYSMH 523
           N + W  ++S  +MH
Sbjct: 472 NSMVWLVLLSACTMH 486



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 118/250 (47%), Gaps = 20/250 (8%)

Query: 377 DVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML 436
           DV++   ++  YA+  R +++++LF E P ++ V+WN+MI G     ++  A  +F +M 
Sbjct: 41  DVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDCADLTMARKLFDEMP 100

Query: 437 EEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM---DVVVANALIDMYAKCG 493
           E  V    V++++++        +E    +        Y M   D+   N++I  Y   G
Sbjct: 101 ERSV----VSWTTMINGFLQFGKIEVAEGLF-------YKMPFRDIAAWNSMIYGYCCNG 149

Query: 494 SITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG--WRPNNLTFVGV 551
            + D   +F  M   N +SW +MI G   HG S E L +F  M   G   +P + T+  V
Sbjct: 150 RVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCV 209

Query: 552 LSACSNGGLLEQG-EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQ 610
           ++AC+N   L QG + +       Y  +  I    ++++       ++ + ++  G    
Sbjct: 210 ITACANASALYQGVQIHAHVFKLGYSFDAYIS--AALITFYANCKQMEDSLRVFHG-KLH 266

Query: 611 PSVMIWRALL 620
            +V+IW AL+
Sbjct: 267 MNVVIWTALV 276


>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Cucumis sativus]
          Length = 650

 Score =  407 bits (1047), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 215/553 (38%), Positives = 314/553 (56%), Gaps = 46/553 (8%)

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           +F ++   +   W+ MI  YA   L  ++   + RMR+  V P  FTF ++ +AC     
Sbjct: 98  VFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALN 157

Query: 359 LDLGNQIHSLVVRVG-LLSDVFVSNALMDVYAKCG------------------------- 392
           +DLG Q+H+  + +G   SD++V N+++D+Y KCG                         
Sbjct: 158 MDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIV 217

Query: 393 ------RMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVT 446
                  ME++  LF + P ++ V W  M+ GY Q G   +A+  F KM +  +   EVT
Sbjct: 218 AYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVT 277

Query: 447 YSSVLRACASLAALEPGMQVHCLTVKANY--DMDVVVANALIDMYAKCGSITDARLVFDM 504
            + V+ ACA L A++    +  +  ++ +    +VVV +ALIDMY+KCGS  +A  VF++
Sbjct: 278 LAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEV 337

Query: 505 MNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG 564
           M + N  S+++MI GY+MHG +   L++F  M +   RPN +TF+G+LSACS+ GL+EQG
Sbjct: 338 MKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQG 397

Query: 565 EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACI 624
              F  M   +G+ P  +HY  MV LLGRAG L++A  L++ +P +P+  +W ALLGAC 
Sbjct: 398 RQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACR 457

Query: 625 IHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGL 673
           IH N +I +++A  +   EP     ++LLSNIYA A  W           EK   K PG 
Sbjct: 458 IHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGC 517

Query: 674 SWIENQ-GMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKER 732
           SW E + G +H F AGDT+H   + IR  L+ L  + R  GY P+L +   D+ +DEKER
Sbjct: 518 SWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKER 577

Query: 733 YLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFH 792
            L  HSEKLALA+ L        I+I+KN+RIC DCH  +   S+I  REII+RD  RFH
Sbjct: 578 ILMSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFH 637

Query: 793 HFQDGCCSCGDFW 805
           HF +G CSCG+FW
Sbjct: 638 HFHNGTCSCGNFW 650



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/448 (22%), Positives = 192/448 (42%), Gaps = 57/448 (12%)

Query: 26  RGLSAQAALSTQQCSNSTTTP--ITFSVSEFNSHSYATSLQSCIQNDDLQTAMT-IHCQV 82
           R LS  + LS  Q   +  +P  I F   +         L S + +  L + +  +H  +
Sbjct: 6   RNLSTVSKLSHLQNLQTRGSPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQVHAHI 65

Query: 83  LKKGNCLDLFATNVLLNVYVKLNRLPDATKL--FDEMPERNTISFVTTIQGYTVSSQFVE 140
           ++ G     +    L+ +  K++    +  L  F ++   N   +   I+GY +     E
Sbjct: 66  IRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQGLLSE 125

Query: 141 AVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFA-CVYKLGHDSNAFVGTALI 199
           +   ++ + R+G     F F+A  K   +    +L   V A  +   G  S+ +VG ++I
Sbjct: 126 STNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMI 185

Query: 200 DAFSVCGCVEFARKVFD---------------------------GLFNDC---------- 222
           D +  CG +  ARKVFD                           GLF+D           
Sbjct: 186 DLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTA 245

Query: 223 ----------FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC 272
                      +EAL +F +M+ VG + +  T A V+ AC  L  ++ A      A ++ 
Sbjct: 246 MVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSG 305

Query: 273 Y--EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVEL 330
           +    ++ V  AL+D+Y+K G    A ++FE M +++V  +S MI  YA    +  A++L
Sbjct: 306 FGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQL 365

Query: 331 FCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR-VGLLSDVFVSNALMDVYA 389
           F  M +  + PN+ TF+ +L AC+    ++ G Q+ + + +  G+         ++D+  
Sbjct: 366 FHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLG 425

Query: 390 KCGRMENSVELFAESP-KRNHVTWNTMI 416
           + G +E +++L    P + N   W  ++
Sbjct: 426 RAGCLEEALDLVKTMPMEPNGGVWGALL 453



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 79/345 (22%), Positives = 127/345 (36%), Gaps = 78/345 (22%)

Query: 23  AWLRGLSAQAALSTQ-----QCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMT 77
           A +RG + Q  LS       +       P++F+ S           ++C    ++     
Sbjct: 112 AMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSAL--------FKACGAALNMDLGKQ 163

Query: 78  IHCQ-VLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSS 136
           +H Q +L  G   DL+  N ++++YVK   L  A K+FDEM ER+ +S+   I  Y    
Sbjct: 164 VHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYG 223

Query: 137 QFVEAVGLFSTLHRE----------GHELN--PFAFTAFLKVLVSMGW----AELCPCVF 180
               A GLF  L  +          G+  N  P     + + +  +G       L   + 
Sbjct: 224 DMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVIS 283

Query: 181 ACVY-----------------KLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----- 218
           AC                     G   N  VG+ALID +S CG  + A KVF+ +     
Sbjct: 284 ACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNV 343

Query: 219 -----------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGC 267
                       +     AL  F  M     +PN  TF  +L AC     +   +     
Sbjct: 344 FSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFA- 402

Query: 268 ALKTCYEMDLYVAVA--------LLDLYTKSGEISNARRIFEEMP 304
                 +M+ +  VA        ++DL  ++G +  A  + + MP
Sbjct: 403 ------KMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMP 441


>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 865

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 226/628 (35%), Positives = 339/628 (53%), Gaps = 48/628 (7%)

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKAC-LGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
           EA+  +S ++  G KP+   F    KAC +  D +RV K  H  A +     D++V  AL
Sbjct: 147 EAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRV-KEVHDDATRCGVMSDVFVGNAL 205

Query: 284 LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
           +  Y K   +  ARR+F+++  +DV+ W+ + + Y +       +++F  M  + V PN 
Sbjct: 206 IHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNP 265

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
            T  S+L ACA ++ L  G +IH   VR G++ ++FV +AL+ +YAKC  +  +  +F  
Sbjct: 266 MTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDL 325

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPA--------------------- 442
            P R+ V+WN ++  Y +  E  K   +F KM  + V A                     
Sbjct: 326 MPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEA 385

Query: 443 --------------TEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDM 488
                          E+T SS+L AC+    L  G ++HC   +     D+    AL+ M
Sbjct: 386 VEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYM 445

Query: 489 YAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTF 548
           YAKCG +  +R VFDMM   + V+WN MI   +MHG   E L +FD M     +PN++TF
Sbjct: 446 YAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTF 505

Query: 549 VGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIP 608
            GVLS CS+  L+E+G   F SM  ++ +EP   HY+ +V +  RAG L++A K I+G+P
Sbjct: 506 TGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMP 565

Query: 609 FQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW----- 663
            +P+   W ALL AC ++ NVE+ ++SA+ + + EP +   +V L NI   A+ W     
Sbjct: 566 MEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQ 625

Query: 664 ------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPD 717
                 E+  +K PG SW++    VH F  GD S+ + + I   L+ L  K + AGY PD
Sbjct: 626 VRILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPD 685

Query: 718 LSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISK 777
              VL+D+ ++EK   L  HSEKLA+AF +  +   S IR+ KNLRIC DCH AIK +SK
Sbjct: 686 TDYVLQDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSK 745

Query: 778 IVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +V   I++RD  RFHHF++G CSC D W
Sbjct: 746 VVGVIIVVRDSLRFHHFKNGNCSCKDLW 773



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 133/482 (27%), Positives = 224/482 (46%), Gaps = 65/482 (13%)

Query: 97  LLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELN 156
           L+ V + +     A +LFD +P+ +  +  T I   T      EA+ ++S+L   G + +
Sbjct: 104 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 163

Query: 157 PFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD 216
              F A  K     G A     V     + G  S+ FVG ALI A+  C CVE AR+VFD
Sbjct: 164 MPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFD 223

Query: 217 GL----------FNDCF------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRV 260
            L           + C+       + ++ F +M   G KPN  T + +L AC  L  ++ 
Sbjct: 224 DLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKS 283

Query: 261 AKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARY-- 318
            K  HG A++    ++L+V  AL+ LY K   +  AR +F+ MP +DV+ W+ ++  Y  
Sbjct: 284 GKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFK 343

Query: 319 ---------------------------------AQTDLSIDAVELFCRMRQAFVAPNQFT 345
                                             +   S +AVE+F +M++    PN+ T
Sbjct: 344 NKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEIT 403

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
             S+L AC+  E L +G +IH  V R   + D+  + AL+ +YAKCG +  S  +F    
Sbjct: 404 ISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMR 463

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
           +++ V WNTMI+     G   +A+ +F KML  +V    VT++ VL  C+    +E G+Q
Sbjct: 464 RKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQ 523

Query: 466 V-------HCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMI 517
           +       H +   AN+       + ++D+Y++ G + +A + +  M  +    +W A++
Sbjct: 524 IFNSMGRDHLVEPDANH------YSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALL 577

Query: 518 SG 519
           + 
Sbjct: 578 AA 579



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 193/386 (50%), Gaps = 37/386 (9%)

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
           ++ + L+ +    G+ + AR++F+ +P+ D    S +I+      LS +A++++  +++ 
Sbjct: 99  HLGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQER 158

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            + P+   F++  +ACA         ++H    R G++SDVFV NAL+  Y KC  +E +
Sbjct: 159 GIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGA 218

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
             +F +   R+ V+W ++   YV+ G   K M +F +M    V    +T SS+L ACA L
Sbjct: 219 RRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAEL 278

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN-----DWN--- 509
             L+ G ++H   V+    +++ V +AL+ +YAKC S+ +AR+VFD+M       WN   
Sbjct: 279 KDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVL 338

Query: 510 ---------------------------EVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
                                      E +WNA+I G   +G S E +++F  MQ+ G++
Sbjct: 339 TAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFK 398

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           PN +T   +L ACS    L  G+     +  ++ +   +   T+++ +  + G L+ +  
Sbjct: 399 PNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGD-LTSTTALLYMYAKCGDLNLSRN 457

Query: 603 LIEGIPFQPSVMIWRALLGACIIHNN 628
           + + +  +  V+ W  ++ A  +H N
Sbjct: 458 VFDMMR-RKDVVAWNTMIIANAMHGN 482



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 180/417 (43%), Gaps = 53/417 (12%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  + ++ L +C +  DL++   IH   ++ G  ++LF  + L+++Y K   + +A  +F
Sbjct: 264 NPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVF 323

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D MP R+ +S+   +  Y  + ++ +   LF  + R+G   +   +              
Sbjct: 324 DLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATW-------------- 369

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMR 234
                           NA +G          GC+E  R           EEA+  F +M+
Sbjct: 370 ----------------NAVIG----------GCMENGRS----------EEAVEMFRKMQ 393

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
            +GFKPN  T + +L AC   + +R+ K  H    +     DL    ALL +Y K G+++
Sbjct: 394 KMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLN 453

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
            +R +F+ M +KDV+ W+ MI   A      +A+ LF +M  + V PN  TF  VL  C+
Sbjct: 454 LSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCS 513

Query: 355 TMEGLDLGNQIHSLVVRVGLLS-DVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT-W 412
               ++ G QI + + R  L+  D    + ++D+Y++ GR+  + +     P     + W
Sbjct: 514 HSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAW 573

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCL 469
             ++        V  A I   K+ E + P     Y S+     +        QV  L
Sbjct: 574 GALLAACRVYKNVELAKISAKKLFEIE-PNNPGNYVSLFNILVTAKMWSEASQVRIL 629


>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
          Length = 666

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 226/596 (37%), Positives = 340/596 (57%), Gaps = 52/596 (8%)

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           AL  +  M ++G  PN++TF F+LK+C      +  +  HG  LK   ++DLYV  +L+ 
Sbjct: 75  ALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLIS 134

Query: 286 LYTKSGE-------------------------------ISNARRIFEEMPKKDVIPWSFM 314
           +Y ++G                                I NA+++F+E+P KDV+ W+ M
Sbjct: 135 MYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAM 194

Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL 374
           I+ YA+T    +A+ELF  M +  V P++ T V+V+ ACA    ++LG Q+HS +   G 
Sbjct: 195 ISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGF 254

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
            S++ + NAL+D+Y+KCG +E +  LF   P ++ ++WNT+I GY  +    +A+++F +
Sbjct: 255 GSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQE 314

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA------LIDM 488
           ML       +VT  S+L ACA L A++ G  +H    K        VANA      LIDM
Sbjct: 315 MLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKG----VANASSLRTSLIDM 370

Query: 489 YAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTF 548
           YAKCG I  A  VF+ +   +  SWNAMI G++MHG +     +F  M++ G  P+++TF
Sbjct: 371 YAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITF 430

Query: 549 VGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIP 608
           VG+LSACS+ G+L+ G   F+SM  +Y + P +EHY  M+ LLG +G   +A ++I  + 
Sbjct: 431 VGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTME 490

Query: 609 FQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW----- 663
            +P  +IW +LL AC +H NVE+G   AQ+++  EPE+  ++VLLSNIYA A  W     
Sbjct: 491 MEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATAGRWNEVAN 550

Query: 664 ------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPD 717
                 +K   K PG S IE   +VH F  GD  H     I GMLE + +   +AG++PD
Sbjct: 551 TRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPD 610

Query: 718 LSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIK 773
            S VL+++ E+ KE  L  HSEKLA+AF L    P + + I+KNLR+C +CH A K
Sbjct: 611 TSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEAYK 666



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 132/512 (25%), Positives = 232/512 (45%), Gaps = 64/512 (12%)

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKL-------NRLPDATKLFDEMPERNTIS 124
           LQ+   IH Q++K G    L  TN  L+  ++        + LP A  +F+ + E N + 
Sbjct: 3   LQSLRMIHAQMIKTG----LHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLI 58

Query: 125 FVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVY 184
           + T  +G+ +SS  V A+ L+  +   G   N + F   LK        +    +   V 
Sbjct: 59  WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVL 118

Query: 185 KLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------------------G 217
           KLG D + +V T+LI  +   G +E A KVFD                            
Sbjct: 119 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQK 178

Query: 218 LFNDC--------------------FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDT 257
           +F++                     ++EAL  F  M     +P+  T   V+ AC    +
Sbjct: 179 MFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 238

Query: 258 IRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIAR 317
           I + +  H       +  +L +  AL+DLY+K GE+  A  +FE +P KDVI W+ +I  
Sbjct: 239 IELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGG 298

Query: 318 YAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR--VGLL 375
           Y   +L  +A+ LF  M ++   PN  T +S+L ACA +  +D+G  IH  + +   G+ 
Sbjct: 299 YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVA 358

Query: 376 SDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKM 435
           +   +  +L+D+YAKCG +E + ++F     ++  +WN MI G+   G    +  +FS+M
Sbjct: 359 NASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRM 418

Query: 436 LEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCG 493
            +  +   ++T+  +L AC+    L+ G  +   ++  +Y M   + +   +ID+    G
Sbjct: 419 RKNGIEPDDITFVGLLSACSHSGMLDLGRHIF-RSMTQDYKMTPKLEHYGCMIDLLGHSG 477

Query: 494 SITDARLVFDMMN-DWNEVSWNAMISGYSMHG 524
              +A  + + M  + + V W +++    MHG
Sbjct: 478 LFKEAEEMINTMEMEPDGVIWCSLLKACKMHG 509



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 116/458 (25%), Positives = 198/458 (43%), Gaps = 71/458 (15%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           NS+++   L+SC ++   +    IH  VLK G  LDL+    L+++YV+  RL DA K+F
Sbjct: 90  NSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVF 149

Query: 115 DEMPERNTISFVTTIQGYTV-------------------------------SSQFVEAVG 143
           DE P R+ +S+   I+GY                                 +  + EA+ 
Sbjct: 150 DESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALE 209

Query: 144 LFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFS 203
           LF  + +     +       +      G  EL   V + +   G  SN  +  ALID +S
Sbjct: 210 LFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYS 269

Query: 204 VCGCVEFARKVFDGL-FNDC---------------FEEALNFFSQMRAVGFKPNNFTFAF 247
            CG +E A  +F+GL + D                ++EAL  F +M   G  PN+ T   
Sbjct: 270 KCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLS 329

Query: 248 VLKACLGLDTIRVAKSAH--------GCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           +L AC  L  I + +  H        G A  +       +  +L+D+Y K G+I  A ++
Sbjct: 330 ILPACAHLGAIDIGRWIHVYIDKRLKGVANASS------LRTSLIDMYAKCGDIEAAHQV 383

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL 359
           F  +  K +  W+ MI  +A    +  + ++F RMR+  + P+  TFV +L AC+    L
Sbjct: 384 FNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGML 443

Query: 360 DLGNQI-HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF-AESPKRNHVTWNTMIV 417
           DLG  I  S+     +   +     ++D+    G  + + E+      + + V W +++ 
Sbjct: 444 DLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLK 503

Query: 418 -----GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
                G V+LGE     ++    +E + P + V  S++
Sbjct: 504 ACKMHGNVELGESFAQNLI---KIEPENPGSYVLLSNI 538



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 133/292 (45%), Gaps = 36/292 (12%)

Query: 365 IHSLVVRVGLLSDVFVSNALMD---VYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQ 421
           IH+ +++ GL +  +  + L++   +      +  ++ +F    + N + WNTM  G+  
Sbjct: 9   IHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 68

Query: 422 LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVV 481
             +   A+ ++  M+   +     T+  +L++CA   A + G Q+H   +K   D+D+ V
Sbjct: 69  SSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV 128

Query: 482 ANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGL---------------- 525
             +LI MY + G + DA  VFD     + VS+ A+I GY+  G                 
Sbjct: 129 HTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDV 188

Query: 526 ---------------SAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKS 570
                            E L++F  M +   RP+  T V V+SAC+  G +E G     S
Sbjct: 189 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ-VHS 247

Query: 571 MVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
            + ++G    ++   +++ L  + G L+ A  L EG+P++  V+ W  L+G 
Sbjct: 248 WIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYK-DVISWNTLIGG 298


>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 224/707 (31%), Positives = 383/707 (54%), Gaps = 31/707 (4%)

Query: 57  HSYAT---SLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
           H YAT    L++C   +D    + +HC  ++ G   D+   + L+++Y K  +L  A ++
Sbjct: 136 HDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRI 195

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           F EMPERN + +   I GY  + +F+E + LF  + + G  ++   + +  +    +   
Sbjct: 196 FREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAF 255

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN------------- 220
           +L   +     K     ++ +GTA +D ++ C  +  A KVF+ L N             
Sbjct: 256 KLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGY 315

Query: 221 ---DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
              D   +AL  F  ++      +  + +  L AC  +         HG A+K     ++
Sbjct: 316 ARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNI 375

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
            VA  +LD+Y K G +  A  IF++M ++D + W+ +IA + Q +  +  + LF  M ++
Sbjct: 376 CVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRS 435

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            + P+ FT+ SV++ACA  + L+ G +IH  +V+ G+  D FV +AL+D+Y KCG +  +
Sbjct: 436 TMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEA 495

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
            ++     ++  V+WN++I G+    +   A   FS+MLE  V     TY++VL  CA++
Sbjct: 496 EKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANM 555

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
           A +E G Q+H   +K N   DV +A+ L+DMY+KCG++ D+RL+F+     + V+W+AMI
Sbjct: 556 ATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMI 615

Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
             Y+ HG   + +K+F+ MQ    +PN+  F+ VL AC++ G +++G  YF+ M ++YG+
Sbjct: 616 CAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQIMQSHYGL 675

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQ 637
           +P +EHY+ MV LLGR+  +++A KLIE + F+   +IWR LL  C +  NVE+   +  
Sbjct: 676 DPHMEHYSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLSNCKMQGNVEVAEKAFN 735

Query: 638 HILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFR 686
            +L  +P+D + +VLL+N+YA    W + A            KEPG SWIE +  VH F 
Sbjct: 736 SLLQLDPQDSSAYVLLANVYANVGMWGEVAKIRSIMKNCKLKKEPGCSWIEVRDEVHTFL 795

Query: 687 AGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERY 733
            GD +H     I      L  + + AGY+PD+ ++L D   +E++ Y
Sbjct: 796 VGDKAHPRSEEIYEQTHLLVDEMKWAGYVPDIDSML-DEEVEEQDPY 841



 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 172/636 (27%), Positives = 303/636 (47%), Gaps = 51/636 (8%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +++  LQ C     L      H Q++       ++  N L+  Y K + +  A K+FD M
Sbjct: 8   TFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDRM 67

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTL--------------------HREGHELN- 156
           P R+ IS+ T I GY        A  LF T+                    +R+  E+  
Sbjct: 68  PHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127

Query: 157 -------PFAFTAFLKVLVSMGWAE---LCPCVFACVYKLGHDSNAFVGTALIDAFSVCG 206
                  P  +  F  VL +    E   L   V     ++G +++   G+AL+D +S C 
Sbjct: 128 RMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCK 187

Query: 207 CVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLK 250
            ++ A ++F  +                 ND F E L  F  M  VG   +  T+A V +
Sbjct: 188 KLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFR 247

Query: 251 ACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIP 310
           +C GL   ++    HG ALK+ +  D  +  A LD+Y K   +S+A ++F  +P      
Sbjct: 248 SCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQS 307

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV 370
           ++ +I  YA+ D  + A+E+F  +++ +++ ++ +    L AC+ ++G   G Q+H L V
Sbjct: 308 YNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAV 367

Query: 371 RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMI 430
           + GL  ++ V+N ++D+Y KCG +  +  +F +  +R+ V+WN +I  + Q  E+ K + 
Sbjct: 368 KCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLS 427

Query: 431 MFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYA 490
           +F  ML   +   + TY SV++ACA   AL  GM++H   VK+   +D  V +AL+DMY 
Sbjct: 428 LFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYG 487

Query: 491 KCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVG 550
           KCG + +A  + D + +   VSWN++ISG+S    S    + F  M + G  P+N T+  
Sbjct: 488 KCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYAT 547

Query: 551 VLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQ 610
           VL  C+N   +E G+    + +    +   +   +++V +  + G++  +  + E  P +
Sbjct: 548 VLDVCANMATIELGKQ-IHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKR 606

Query: 611 PSVMIWRALLGACIIHNNVE--IGRLSAQHILDFEP 644
             V  W A++ A   H + E  I       +L+ +P
Sbjct: 607 DYV-TWSAMICAYAYHGHGEQAIKLFEEMQLLNVKP 641



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/412 (29%), Positives = 220/412 (53%), Gaps = 35/412 (8%)

Query: 243 FTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEE 302
           FTF+ +L+ C  L  +   K AH   + T +   +YVA  L+  Y KS  ++ A ++F+ 
Sbjct: 7   FTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDR 66

Query: 303 MPKKDVIPWSFMIARYAQ-------------------------------TDLSIDAVELF 331
           MP +DVI W+ MI  YA+                                 ++  ++E+F
Sbjct: 67  MPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126

Query: 332 CRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC 391
            RMR   +  +  TF  VL+AC+ +E   LG Q+H L +++G  +DV   +AL+D+Y+KC
Sbjct: 127 VRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKC 186

Query: 392 GRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVL 451
            +++ +  +F E P+RN V W+ +I GYVQ     + + +F  ML+  +  ++ TY+SV 
Sbjct: 187 KKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVF 246

Query: 452 RACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEV 511
           R+CA L+A + G Q+H   +K+++  D ++  A +DMYAKC  ++DA  VF+ + +    
Sbjct: 247 RSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQ 306

Query: 512 SWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSN-GGLLEQGEAYFKS 570
           S+NA+I GY+      + L++F  +Q+     + ++  G L+ACS   G LE  + +  +
Sbjct: 307 SYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLA 366

Query: 571 MVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           +    G   C+ +  +++ + G+ G L +A  + + +  + +V  W A++ A
Sbjct: 367 VKCGLGFNICVAN--TILDMYGKCGALVEACTIFDDMERRDAVS-WNAIIAA 415



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 148/301 (49%), Gaps = 34/301 (11%)

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           +FTF  +LQ C+ ++ L+ G Q H+ ++    +  ++V+N L+  Y K   M  + ++F 
Sbjct: 6   KFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFD 65

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE------------------------ 438
             P R+ ++WNTMI GY ++G +G A  +F  M E                         
Sbjct: 66  RMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEI 125

Query: 439 -------QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAK 491
                  ++P    T+S VL+AC+ +     G+QVHCL ++  ++ DVV  +AL+DMY+K
Sbjct: 126 FVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSK 185

Query: 492 CGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGV 551
           C  +  A  +F  M + N V W+A+I+GY  +    E LK+F  M + G   +  T+  V
Sbjct: 186 CKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASV 245

Query: 552 LSACSNGGLLEQG-EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQ 610
             +C+     + G + +  ++ +++  +  I   T+ + +  +   +  A K+   +P  
Sbjct: 246 FRSCAGLSAFKLGTQLHGHALKSDFAYDSIIG--TATLDMYAKCDRMSDAWKVFNTLPNP 303

Query: 611 P 611
           P
Sbjct: 304 P 304



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 139/291 (47%), Gaps = 30/291 (10%)

Query: 50  SVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD 109
           S  E +  +Y + +++C     L   M IH +++K G  LD F  + L+++Y K   L +
Sbjct: 435 STMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLME 494

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A K+ D + E+ T+S+ + I G++   Q   A   FS +   G   + F +   L V  +
Sbjct: 495 AEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCAN 554

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------- 218
           M   EL   + A + KL   S+ ++ + L+D +S CG ++ +R +F+             
Sbjct: 555 MATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAM 614

Query: 219 -----FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL-------GLDTIRVAKSAHG 266
                ++   E+A+  F +M+ +  KPN+  F  VL+AC        GL   ++ +S +G
Sbjct: 615 ICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQIMQSHYG 674

Query: 267 CALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
                   M+ Y    ++DL  +S +++ A ++ E M  + D + W  +++
Sbjct: 675 LDP----HMEHY--SCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLS 719



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 35/216 (16%)

Query: 441 PATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARL 500
           P  + T+S +L+ C++L AL PG Q H   +  ++   + VAN L+  Y K  ++  A  
Sbjct: 3   PTKKFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFK 62

Query: 501 VFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR---GWR--------------- 542
           VFD M   + +SWN MI GY+  G       +FD M +R    W                
Sbjct: 63  VFDRMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKS 122

Query: 543 ------------PNNL-TFVGVLSACSNGGLLEQGEAY-FKSMVANYGIEPCIEHYTSMV 588
                       P++  TF  VL ACS  G+ + G       +    G E  +   +++V
Sbjct: 123 IEIFVRMRSLKIPHDYATFSVVLKACS--GIEDYGLGLQVHCLAIQMGFENDVVTGSALV 180

Query: 589 SLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACI 624
            +  +   LD A ++   +P + +++ W A++   +
Sbjct: 181 DMYSKCKKLDGAFRIFREMP-ERNLVCWSAVIAGYV 215


>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Cucumis sativus]
          Length = 610

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 210/560 (37%), Positives = 324/560 (57%), Gaps = 14/560 (2%)

Query: 257 TIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIA 316
           +I   +  H    K+    D ++   L+  Y K G   +A ++F++MP KD++ W+ +I+
Sbjct: 54  SISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLIS 113

Query: 317 RYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLS 376
            +++  L +     +    +  V PN+ T +S++ AC+    LD G  IH   ++VG   
Sbjct: 114 GFSRC-LHMSLTAFYTMKFEMSVKPNEVTILSMISACSG--ALDAGKYIHGFGIKVGGTL 170

Query: 377 DVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML 436
           +V V+N+L+++Y K G + ++  LF   P  N V+WN++I   V  G   + +  F+KM 
Sbjct: 171 EVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMR 230

Query: 437 EEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSIT 496
              +   E T  ++L+AC  L   +    +H L     +   + +A AL+D YAK G ++
Sbjct: 231 RLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLS 290

Query: 497 DARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS 556
            +  VF  +   + V+W AM++GY+ HGL  E +K+F+ M  +G  P+++TF  +LSACS
Sbjct: 291 ASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACS 350

Query: 557 NGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIW 616
           + GL+ +G++YF  M   YGIEP ++HY+ MV LLGR G L+ A ++I+ +P +P+  +W
Sbjct: 351 HSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVW 410

Query: 617 RALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA--------- 667
            ALLGAC +H N+E+G+  A+H+++ EP D   +++LSN+Y+ +RSW+ AA         
Sbjct: 411 GALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKER 470

Query: 668 --SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDV 725
              + PG S IE     H+F  GD SH +   I   LE L  K RKAGY      VL+DV
Sbjct: 471 GLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKAGYSSKTEYVLQDV 530

Query: 726 REDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIII 785
            E+ KE  +  HSEKLA+AF L        + I KNLRIC DCH+  K+IS I +R III
Sbjct: 531 EEEVKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHSTAKLISLIEKRTIII 590

Query: 786 RDVHRFHHFQDGCCSCGDFW 805
           RD  RFHHF DG CSC D+W
Sbjct: 591 RDPKRFHHFSDGFCSCADYW 610



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 192/404 (47%), Gaps = 34/404 (8%)

Query: 148 LHREGHEL----NPFAFTAFLKVLVSMGWAELCPCVFAC------VYKLGHDSNAFVGTA 197
           LHR  H +     P A  + L + V+      CP +  C      V+K     + F+G  
Sbjct: 25  LHRSFHLVRQCATPEAIVSALLIAVNS-----CPSISNCREIHARVFKSLLYRDGFIGDQ 79

Query: 198 LIDAFSVCGCVEFARKVFDGL--------------FNDCFEEALNFFSQMR-AVGFKPNN 242
           L+  ++  G  E A K+FD +              F+ C   +L  F  M+  +  KPN 
Sbjct: 80  LVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSRCLHMSLTAFYTMKFEMSVKPNE 139

Query: 243 FTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEE 302
            T   ++ AC G   +   K  HG  +K    +++ VA +L+++Y KSG++++A R+FE 
Sbjct: 140 VTILSMISACSG--ALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEA 197

Query: 303 MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG 362
           +P  + + W+ +IA       + + ++ F +MR+  +  ++ T +++LQAC  +    L 
Sbjct: 198 IPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLA 257

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
             IH L+   G  + + ++ AL+D YAK GR+  S  +F E    + V W  M+ GY   
Sbjct: 258 ESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAH 317

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ-VHCLTVKANYDMDVVV 481
           G   +A+ +F  M  + +    VT++ +L AC+    +  G    + ++     +  V  
Sbjct: 318 GLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDH 377

Query: 482 ANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHG 524
            + ++D+  +CG + DA  ++ +M  + N   W A++    +HG
Sbjct: 378 YSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHG 421



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 177/377 (46%), Gaps = 27/377 (7%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           IH +V K     D F  + L+  Y KL    DA KLFD+MP ++ +S+ + I G++    
Sbjct: 61  IHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSRCLH 120

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
              ++  F T+  E   + P   T    +    G  +    +     K+G      V  +
Sbjct: 121 M--SLTAFYTMKFE-MSVKPNEVTILSMISACSGALDAGKYIHGFGIKVGGTLEVKVANS 177

Query: 198 LIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPN 241
           LI+ +   G +  A ++F+ +                 N C  E +++F++MR +G + +
Sbjct: 178 LINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQD 237

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
             T   +L+ACL L   ++A+S HG    T +   + +A ALLD Y K G +S +  +F 
Sbjct: 238 EGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFT 297

Query: 302 EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL 361
           E+   D + W+ M+A YA   L  +A++LF  M    + P+  TF  +L AC+    ++ 
Sbjct: 298 EVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNE 357

Query: 362 GNQIHSLVVRV-GLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTM---- 415
           G    +++  V G+   V   + ++D+  +CG + ++ E+    P + N   W  +    
Sbjct: 358 GKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGAC 417

Query: 416 -IVGYVQLG-EVGKAMI 430
            + G ++LG EV + +I
Sbjct: 418 RVHGNIELGKEVAEHLI 434



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 109/251 (43%), Gaps = 19/251 (7%)

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
           L     IH   +K G  L++   N L+N+Y K   L  A +LF+ +P+ NT+S+ + I  
Sbjct: 153 LDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAA 212

Query: 132 YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSN 191
              +    E +  F+ + R G E +     A L+  + +G  +L   +   ++  G  + 
Sbjct: 213 QVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAK 272

Query: 192 AFVGTALIDAFSVCGCVEFARKVFDGL-FND---------------CFEEALNFFSQMRA 235
             + TAL+D ++  G +  +  VF  + F D                  EA+  F  M  
Sbjct: 273 ITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMAN 332

Query: 236 VGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA--VALLDLYTKSGEI 293
            G +P++ TF  +L AC     +   KS     +   Y ++  V     ++DL  + G +
Sbjct: 333 KGLEPDHVTFTHLLSACSHSGLVNEGKSYFN-VMSEVYGIEPRVDHYSCMVDLLGRCGLL 391

Query: 294 SNARRIFEEMP 304
           ++A  + + MP
Sbjct: 392 NDAYEVIQNMP 402



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 104/215 (48%), Gaps = 7/215 (3%)

Query: 410 VTWNTMIVG--YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVH 467
           + WN+ I+   ++Q       ++  S  L  Q    E   S++L A  S  ++    ++H
Sbjct: 3   LRWNSSILYNFFIQSRTQYPLLLHRSFHLVRQCATPEAIVSALLIAVNSCPSISNCREIH 62

Query: 468 CLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSA 527
               K+    D  + + L+  Y K G   DA  +FD M   + VSWN++ISG+S   L  
Sbjct: 63  ARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFS-RCLHM 121

Query: 528 EVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSM 587
            +   + +  +   +PN +T + ++SACS  G L+ G+ Y        G    ++   S+
Sbjct: 122 SLTAFYTMKFEMSVKPNEVTILSMISACS--GALDAGK-YIHGFGIKVGGTLEVKVANSL 178

Query: 588 VSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           +++ G++G L  A +L E IP  P+ + W +++ A
Sbjct: 179 INMYGKSGDLTSACRLFEAIP-DPNTVSWNSIIAA 212



 Score = 47.4 bits (111), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 78/201 (38%), Gaps = 19/201 (9%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           LQ+C+     + A +IH  +   G    +     LL+ Y KL RL  +  +F E+   + 
Sbjct: 245 LQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADR 304

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +++   + GY       EA+ LF ++  +G E +   FT  L      G        F  
Sbjct: 305 VAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNV 364

Query: 183 VYKL-GHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPN 241
           + ++ G +      + ++D    C           GL ND +E   N       +  +PN
Sbjct: 365 MSEVYGIEPRVDHYSCMVDLLGRC-----------GLLNDAYEVIQN-------MPMEPN 406

Query: 242 NFTFAFVLKACLGLDTIRVAK 262
              +  +L AC     I + K
Sbjct: 407 AGVWGALLGACRVHGNIELGK 427


>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 687

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 226/628 (35%), Positives = 339/628 (53%), Gaps = 48/628 (7%)

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKAC-LGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
           EA+  +S ++  G KP+   F    KAC +  D +RV K  H  A +     D++V  AL
Sbjct: 61  EAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRV-KEVHDDATRCGVMSDVFVGNAL 119

Query: 284 LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
           +  Y K   +  ARR+F+++  +DV+ W+ + + Y +       +++F  M  + V PN 
Sbjct: 120 IHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNP 179

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
            T  S+L ACA ++ L  G +IH   VR G++ ++FV +AL+ +YAKC  +  +  +F  
Sbjct: 180 MTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDL 239

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPA--------------------- 442
            P R+ V+WN ++  Y +  E  K   +F KM  + V A                     
Sbjct: 240 MPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEA 299

Query: 443 --------------TEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDM 488
                          E+T SS+L AC+    L  G ++HC   +     D+    AL+ M
Sbjct: 300 VEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYM 359

Query: 489 YAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTF 548
           YAKCG +  +R VFDMM   + V+WN MI   +MHG   E L +FD M     +PN++TF
Sbjct: 360 YAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTF 419

Query: 549 VGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIP 608
            GVLS CS+  L+E+G   F SM  ++ +EP   HY+ +V +  RAG L++A K I+G+P
Sbjct: 420 TGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMP 479

Query: 609 FQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW----- 663
            +P+   W ALL AC ++ NVE+ ++SA+ + + EP +   +V L NI   A+ W     
Sbjct: 480 MEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQ 539

Query: 664 ------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPD 717
                 E+  +K PG SW++    VH F  GD S+ + + I   L+ L  K + AGY PD
Sbjct: 540 VRILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPD 599

Query: 718 LSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISK 777
              VL+D+ ++EK   L  HSEKLA+AF +  +   S IR+ KNLRIC DCH AIK +SK
Sbjct: 600 TDYVLQDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSK 659

Query: 778 IVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +V   I++RD  RFHHF++G CSC D W
Sbjct: 660 VVGVIIVVRDSLRFHHFKNGNCSCKDLW 687



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 133/481 (27%), Positives = 224/481 (46%), Gaps = 65/481 (13%)

Query: 97  LLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELN 156
           L+ V + +     A +LFD +P+ +  +  T I   T      EA+ ++S+L   G + +
Sbjct: 18  LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 77

Query: 157 PFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD 216
              F A  K     G A     V     + G  S+ FVG ALI A+  C CVE AR+VFD
Sbjct: 78  MPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFD 137

Query: 217 GL----------FNDCF------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRV 260
            L           + C+       + ++ F +M   G KPN  T + +L AC  L  ++ 
Sbjct: 138 DLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKS 197

Query: 261 AKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARY-- 318
            K  HG A++    ++L+V  AL+ LY K   +  AR +F+ MP +DV+ W+ ++  Y  
Sbjct: 198 GKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFK 257

Query: 319 ---------------------------------AQTDLSIDAVELFCRMRQAFVAPNQFT 345
                                             +   S +AVE+F +M++    PN+ T
Sbjct: 258 NKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEIT 317

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
             S+L AC+  E L +G +IH  V R   + D+  + AL+ +YAKCG +  S  +F    
Sbjct: 318 ISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMR 377

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
           +++ V WNTMI+     G   +A+ +F KML  +V    VT++ VL  C+    +E G+Q
Sbjct: 378 RKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQ 437

Query: 466 V-------HCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMI 517
           +       H +   AN+       + ++D+Y++ G + +A + +  M  +    +W A++
Sbjct: 438 IFNSMGRDHLVEPDANH------YSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALL 491

Query: 518 S 518
           +
Sbjct: 492 A 492



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 193/386 (50%), Gaps = 37/386 (9%)

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
           ++ + L+ +    G+ + AR++F+ +P+ D    S +I+      LS +A++++  +++ 
Sbjct: 13  HLGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQER 72

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            + P+   F++  +ACA         ++H    R G++SDVFV NAL+  Y KC  +E +
Sbjct: 73  GIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGA 132

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
             +F +   R+ V+W ++   YV+ G   K M +F +M    V    +T SS+L ACA L
Sbjct: 133 RRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAEL 192

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN-----DWN--- 509
             L+ G ++H   V+    +++ V +AL+ +YAKC S+ +AR+VFD+M       WN   
Sbjct: 193 KDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVL 252

Query: 510 ---------------------------EVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
                                      E +WNA+I G   +G S E +++F  MQ+ G++
Sbjct: 253 TAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFK 312

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           PN +T   +L ACS    L  G+     +  ++ +   +   T+++ +  + G L+ +  
Sbjct: 313 PNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGD-LTSTTALLYMYAKCGDLNLSRN 371

Query: 603 LIEGIPFQPSVMIWRALLGACIIHNN 628
           + + +  +  V+ W  ++ A  +H N
Sbjct: 372 VFDMMR-RKDVVAWNTMIIANAMHGN 396



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 180/417 (43%), Gaps = 53/417 (12%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  + ++ L +C +  DL++   IH   ++ G  ++LF  + L+++Y K   + +A  +F
Sbjct: 178 NPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVF 237

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D MP R+ +S+   +  Y  + ++ +   LF  + R+G   +   +              
Sbjct: 238 DLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATW-------------- 283

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMR 234
                           NA +G          GC+E  R           EEA+  F +M+
Sbjct: 284 ----------------NAVIG----------GCMENGRS----------EEAVEMFRKMQ 307

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
            +GFKPN  T + +L AC   + +R+ K  H    +     DL    ALL +Y K G+++
Sbjct: 308 KMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLN 367

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
            +R +F+ M +KDV+ W+ MI   A      +A+ LF +M  + V PN  TF  VL  C+
Sbjct: 368 LSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCS 427

Query: 355 TMEGLDLGNQIHSLVVRVGLLS-DVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT-W 412
               ++ G QI + + R  L+  D    + ++D+Y++ GR+  + +     P     + W
Sbjct: 428 HSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAW 487

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCL 469
             ++        V  A I   K+ E + P     Y S+     +        QV  L
Sbjct: 488 GALLAACRVYKNVELAKISAKKLFEIE-PNNPGNYVSLFNILVTAKMWSEASQVRIL 543


>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Glycine max]
          Length = 611

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 218/591 (36%), Positives = 328/591 (55%), Gaps = 45/591 (7%)

Query: 260 VAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYA 319
           +AK  H   +K        +   LL+ Y K G I +A ++F+ +P++D + W+ ++    
Sbjct: 21  LAKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACN 80

Query: 320 QTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL--GNQIHSLVVRVGLLSD 377
            ++    A+ +   +      P+ F F S+++ACA +  L +  G Q+H+         D
Sbjct: 81  LSNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDD 140

Query: 378 VFVSNALMDVYAK-------------------------------CGRMENSVELFAESPK 406
             V ++L+D+YAK                                GR   +  LF ++P 
Sbjct: 141 DVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTPY 200

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATE-VTYSSVLRACASLAALEPGMQ 465
           RN   W  +I G VQ G    A  +F +M  E +  T+ +  SSV+ ACA+LA  E G Q
Sbjct: 201 RNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGKQ 260

Query: 466 VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGL 525
           +H + +   Y+  + ++NALIDMYAKC  +  A+ +F  M   + VSW ++I G + HG 
Sbjct: 261 MHGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQ 320

Query: 526 SAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYT 585
           + E L ++D M   G +PN +TFVG++ ACS+ GL+ +G   F++MV ++GI P ++HYT
Sbjct: 321 AEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQHYT 380

Query: 586 SMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPE 645
            ++ L  R+GHLD+A  LI  +P  P    W ALL +C  H N ++    A H+L+ +PE
Sbjct: 381 CLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKRHGNTQMAVRIADHLLNLKPE 440

Query: 646 DEATHVLLSNIYAMARSWEKA-----------ASKEPGLSWIENQGMVHYFRAGDTSHAD 694
           D ++++LLSNIYA A  WE             A K PG S I+     H F AG+TSH  
Sbjct: 441 DPSSYILLSNIYAGAGMWEDVSKVRKLMMTLEAKKAPGYSCIDLGKGSHVFYAGETSHPM 500

Query: 695 MNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSS 754
            + I G++  L+ + RK GY PD S+VL D+ + EKER L+ HSE+LA+A+ L K  P +
Sbjct: 501 RDEIIGLMRELDEEMRKRGYAPDTSSVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGT 560

Query: 755 PIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            IRI+KNLR+C DCHT +K+IS I  REI +RD  R+HHF+DG CSC DFW
Sbjct: 561 VIRIVKNLRVCGDCHTVLKLISAITNREIYVRDAKRYHHFKDGNCSCNDFW 611



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 104/450 (23%), Positives = 198/450 (44%), Gaps = 57/450 (12%)

Query: 58  SYATSLQSCIQNDDLQT---AMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           S A SLQS + +   Q+   A  +H Q++K G        N LLN Y K   + DA +LF
Sbjct: 2   SLAQSLQSQLCSAARQSPLLAKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLF 61

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG--W 172
           D +P R+ +++ + +    +S++   A+ +  +L   G   + F F + +K   ++G   
Sbjct: 62  DALPRRDPVAWASLLTACNLSNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLH 121

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------------- 218
            +    V A  +      +  V ++LID ++  G  ++ R VFD +              
Sbjct: 122 VKQGKQVHARFFLSPFSDDDVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISG 181

Query: 219 ------------------FNDCFE---------------EALNFFSQMRAVGFKPNN-FT 244
                             + + F                +A + F +MR  G    +   
Sbjct: 182 YARSGRKFEAFRLFRQTPYRNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLV 241

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
            + V+ AC  L    + K  HG  +   YE  L+++ AL+D+Y K  ++  A+ IF EM 
Sbjct: 242 LSSVVGACANLALWELGKQMHGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEMC 301

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
           +KDV+ W+ +I   AQ   + +A+ L+  M  A V PN+ TFV ++ AC+    +  G  
Sbjct: 302 RKDVVSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRT 361

Query: 365 I-HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMIVGYVQL 422
           +  ++V   G+   +     L+D++++ G ++ +  L    P   +  TW  ++    + 
Sbjct: 362 LFRTMVEDHGISPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKRH 421

Query: 423 GEVGKAMIMFSKM--LEEQVPATEVTYSSV 450
           G    A+ +   +  L+ + P++ +  S++
Sbjct: 422 GNTQMAVRIADHLLNLKPEDPSSYILLSNI 451



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 70/296 (23%), Positives = 125/296 (42%), Gaps = 36/296 (12%)

Query: 89  LDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTL 148
           L+  +   +++ Y +  R  +A +LF + P RN  ++   I G   S   V+A  LF  +
Sbjct: 170 LNSISWTTMISGYARSGRKFEAFRLFRQTPYRNLFAWTALISGLVQSGNGVDAFHLFVEM 229

Query: 149 HREGHEL-NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGC 207
             EG  + +P   ++ +    ++   EL   +   V  LG++S  F+  ALID ++ C  
Sbjct: 230 RHEGISVTDPLVLSSVVGACANLALWELGKQMHGVVITLGYESCLFISNALIDMYAKCSD 289

Query: 208 VEFARKVF-DGLFNDCF---------------EEALNFFSQMRAVGFKPNNFTFAFVLKA 251
           +  A+ +F +    D                 EEAL  + +M   G KPN  TF  ++ A
Sbjct: 290 LVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNEVTFVGLIHA 349

Query: 252 C-------LGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
           C        G    R     HG +        L     LLDL+++SG +  A  +   MP
Sbjct: 350 CSHAGLVSKGRTLFRTMVEDHGIS------PSLQHYTCLLDLFSRSGHLDEAENLIRTMP 403

Query: 305 -KKDVIPWSFMIA---RYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM 356
              D   W+ +++   R+  T +++   +    ++     P+ +  +S + A A M
Sbjct: 404 VNPDEPTWAALLSSCKRHGNTQMAVRIADHLLNLKPE--DPSSYILLSNIYAGAGM 457


>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 640

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 234/615 (38%), Positives = 347/615 (56%), Gaps = 68/615 (11%)

Query: 257 TIRVAKSAHGCALKTCYEMDLYVAVALL------DLYTKSGEISNARRIFEEMPKKDVIP 310
           TIR     H   +K+    D   A  +L      DL+ +  ++  A +IF +MP+++   
Sbjct: 28  TIRDLSQIHAVFIKSGQIRDTLAAAEILRFCATSDLHHR--DLDYAHKIFNQMPQRNCFS 85

Query: 311 WSFMIARYAQTD--LSIDAVELFCRM-RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
           W+ +I  ++++D   ++ A+ LFC M    F+ PN+FTF SVL+ACA    +  G QIH 
Sbjct: 86  WNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPSVLKACAKTGKIQQGKQIHG 145

Query: 368 LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF------------AESPKRNH--VTWN 413
           L ++ G   D FV + L+ +Y  CG M+++  LF             +  KR+   V WN
Sbjct: 146 LALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIEREMVMMIDRRKRDGEVVLWN 205

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLE--------------------------------EQVP 441
            MI GY++LG+   A ++F KM +                                E + 
Sbjct: 206 VMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAVEVFREMKKGEDIR 265

Query: 442 ATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLV 501
              VT  SVL A + L +LE G  +H     +   +D V+ +ALIDMY+KCG I  A +V
Sbjct: 266 PNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIMV 325

Query: 502 FDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLL 561
           F+ +   N ++W+AMI+G+++HG + + +  F  M+Q G RP+++ ++ +L+ACS+ GL+
Sbjct: 326 FERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHAGLV 385

Query: 562 EQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLG 621
           E+G  YF  MV+  G+EP IEHY  MV LLGR G LD+A + I  +P +P  +IW+ALLG
Sbjct: 386 EEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRLGLLDEAEEFILNMPIKPDDVIWKALLG 445

Query: 622 ACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KE 670
           AC +H NVE+G+  A  ++D  P D   +V LSN+YA   +W + +            K+
Sbjct: 446 ACRMHRNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEMDIRKD 505

Query: 671 PGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEK 730
           PG SWI+  G++H F   D SH     I  ML  ++ K R AGY P  + VL ++ E++K
Sbjct: 506 PGCSWIDIDGVLHEFLVEDDSHPRAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDK 565

Query: 731 ERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHR 790
           E  L  HSEK+A AF L    P  PIRI+KNLRIC DCH++IK+ISK+ +R+I +RD  R
Sbjct: 566 ENALHYHSEKMATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKR 625

Query: 791 FHHFQDGCCSCGDFW 805
           FHHFQDG CSC D+W
Sbjct: 626 FHHFQDGSCSCMDYW 640



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 138/285 (48%), Gaps = 47/285 (16%)

Query: 226 ALNFFSQMRAVGF-KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD-------- 276
           A+  F +M +  F +PN FTF  VLKAC     I+  K  HG ALK  +  D        
Sbjct: 104 AITLFCEMMSDEFIEPNRFTFPSVLKACAKTGKIQQGKQIHGLALKYGFGGDEFVMSNLV 163

Query: 277 -LYVAVALL------------------------------------DLYTKSGEISNARRI 299
            +YV   L+                                    D Y + G+   AR +
Sbjct: 164 RMYVICGLMKDACVLFYKNIIEREMVMMIDRRKRDGEVVLWNVMIDGYMRLGDCKAARML 223

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF-VAPNQFTFVSVLQACATMEG 358
           F++M ++ V+ W+ MI+ Y+Q     DAVE+F  M++   + PN  T VSVL A + +  
Sbjct: 224 FDKMRQRSVVSWNTMISGYSQNGFFKDAVEVFREMKKGEDIRPNYVTLVSVLPAVSRLGS 283

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           L+LG  +H      G+  D  + +AL+D+Y+KCG +E ++ +F   P+ N +TW+ MI G
Sbjct: 284 LELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIMVFERLPRENVITWSAMING 343

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
           +   G+ G A+  F KM +  V  ++V Y ++L AC+    +E G
Sbjct: 344 FAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHAGLVEEG 388



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 156/364 (42%), Gaps = 69/364 (18%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLN----RLPDATKLFDEMPERNTISFVTTIQGYT 133
           IH   +K G   D  A   +L      +     L  A K+F++MP+RN  S+ T I+G++
Sbjct: 35  IHAVFIKSGQIRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFS 94

Query: 134 VSSQ--FVEAVGLF-STLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDS 190
            S +   + A+ LF   +  E  E N F F + LK     G  +    +     K G   
Sbjct: 95  ESDEDKALIAITLFCEMMSDEFIEPNRFTFPSVLKACAKTGKIQQGKQIHGLALKYGFGG 154

Query: 191 NAFVGTALIDAFSVCG-----CVEF----------------------------------- 210
           + FV + L+  + +CG     CV F                                   
Sbjct: 155 DEFVMSNLVRMYVICGLMKDACVLFYKNIIEREMVMMIDRRKRDGEVVLWNVMIDGYMRL 214

Query: 211 -----ARKVFDGLF----------------NDCFEEALNFFSQMR-AVGFKPNNFTFAFV 248
                AR +FD +                 N  F++A+  F +M+     +PN  T   V
Sbjct: 215 GDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAVEVFREMKKGEDIRPNYVTLVSV 274

Query: 249 LKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDV 308
           L A   L ++ + +  H  A  +   +D  +  AL+D+Y+K G I  A  +FE +P+++V
Sbjct: 275 LPAVSRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIMVFERLPRENV 334

Query: 309 IPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSL 368
           I WS MI  +A    + DA++ FC+MRQA V P+   ++++L AC+    ++ G +  S 
Sbjct: 335 ITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHAGLVEEGRRYFSQ 394

Query: 369 VVRV 372
           +V V
Sbjct: 395 MVSV 398



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/321 (21%), Positives = 136/321 (42%), Gaps = 63/321 (19%)

Query: 95  NVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHE 154
           NV+++ Y++L     A  LFD+M +R+ +S+ T I GY+ +  F +AV +F  + ++G +
Sbjct: 205 NVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAVEVFREM-KKGED 263

Query: 155 LNP--FAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFAR 212
           + P      + L  +  +G  EL   +       G   +  +G+ALID +S CG +E A 
Sbjct: 264 IRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAI 323

Query: 213 KVFDGLFNDCF----------------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLD 256
            VF+ L  +                   +A++ F +MR  G +P++  +  +L AC    
Sbjct: 324 MVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTAC---- 379

Query: 257 TIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIP-----W 311
                                          + +G +   RR F +M   D +      +
Sbjct: 380 -------------------------------SHAGLVEEGRRYFSQMVSVDGLEPRIEHY 408

Query: 312 SFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR 371
             M+    +  L  +A E    M    + P+   + ++L AC     +++G ++ ++++ 
Sbjct: 409 GCMVDLLGRLGLLDEAEEFILNMP---IKPDDVIWKALLGACRMHRNVEMGKRVANILMD 465

Query: 372 VGLLSDVFVSNALMDVYAKCG 392
           + +  D     AL ++YA  G
Sbjct: 466 M-VPHDSGAYVALSNMYASQG 485


>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
 gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
          Length = 514

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 201/514 (39%), Positives = 310/514 (60%), Gaps = 11/514 (2%)

Query: 303 MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG 362
           M   D + W+ +I    +     DA+  F +MR   +  +++T  SVL + A+M+ +   
Sbjct: 1   MEFDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNA 60

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
             +H L+++ G  +   V+NAL+D+YAK G+++ ++ +F++   ++ V+W +++ GY   
Sbjct: 61  ISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHN 120

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
           G   +A+ +F KM    V   ++  +SVL ACA L  ++ G Q+H   VK+  +  + V 
Sbjct: 121 GSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVD 180

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
           N+L+ MYAKCGSI DA   FD M   + +SW A+I GY+ +G     L+ +D M   G +
Sbjct: 181 NSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTK 240

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           P+ +TF+G+L ACS+ GLL  G AYF++M   YGI+P  EHY  M+ LLGR+G L +A  
Sbjct: 241 PDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKG 300

Query: 603 LIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARS 662
           L+  +   P  ++W+ALL AC +H  +E+G ++A+++ + EP +   +V+LSN+Y+ A  
Sbjct: 301 LLNQMVVAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGK 360

Query: 663 WEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRK 711
           WE AA            KEPG SWIE    V  F + D +H   N I   ++ + M  ++
Sbjct: 361 WEDAARIRRLMRSRGICKEPGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDEIIMLIKE 420

Query: 712 AGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTA 771
           AGY+PD+S  L D  ++ KE  L  HSEKLA+AF L  +P  +PIRI KNLR+C DCHTA
Sbjct: 421 AGYVPDMSFALHDTDDEVKELGLAYHSEKLAVAFGLLTVPQGAPIRIFKNLRVCGDCHTA 480

Query: 772 IKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +K  SK+  R II+RD + FHHF +G CSCGD+W
Sbjct: 481 MKYTSKVYARHIILRDSNCFHHFTEGRCSCGDYW 514



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 168/318 (52%), Gaps = 19/318 (5%)

Query: 217 GLFNDCFEE-ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
           G   + FEE AL+FF +MR+   K + +T   VL +   +  ++ A S H   +KT +E 
Sbjct: 15  GCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCLIIKTGFEA 74

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
              V  AL+D+Y K G++  A  +F +M  KDV+ W+ ++  Y+      +A++LFC+MR
Sbjct: 75  YKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLFCKMR 134

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
            + V P+Q    SVL ACA +  +D G QIH+ +V+ GL S + V N+L+ +YAKCG + 
Sbjct: 135 ISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIV 194

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
           ++   F   P R+ ++W  +IVGY Q G    ++  + +M+        +T+  +L AC+
Sbjct: 195 DANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACS 254

Query: 456 SLAALEPGMQVHCLTVKANYD-MDVVVA--------NALIDMYAKCGSITDAR-LVFDMM 505
               L  G        +A ++ MD V            +ID+  + G + +A+ L+  M+
Sbjct: 255 HNGLLGSG--------RAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMV 306

Query: 506 NDWNEVSWNAMISGYSMH 523
              + V W A+++   +H
Sbjct: 307 VAPDAVVWKALLAACRVH 324



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 81/333 (24%), Positives = 142/333 (42%), Gaps = 33/333 (9%)

Query: 140 EAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALI 199
           +A+  F  +     +++ +   + L    SM   +    V   + K G ++   V  ALI
Sbjct: 24  DALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCLIIKTGFEAYKLVNNALI 83

Query: 200 DAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRAVGFKPNNF 243
           D ++  G ++ A  VF  +                 N  +EEA+  F +MR  G  P+  
Sbjct: 84  DMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLFCKMRISGVYPDQI 143

Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
             A VL AC  L  +   +  H   +K+  E  L V  +L+ +Y K G I +A R F+ M
Sbjct: 144 AVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANRAFDNM 203

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
           P +DVI W+ +I  YAQ      +++ + +M      P+  TF+ +L AC+    L  G 
Sbjct: 204 PTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACSHNGLLGSGR 263

Query: 364 QIHSLVVRV-GLLSDVFVSNALMDVYAKCGRMENSVELFAE---SPKRNHVTWNTMIVG- 418
                + +V G+         ++D+  + G++  +  L  +   +P  + V W  ++   
Sbjct: 264 AYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMVVAP--DAVVWKALLAAC 321

Query: 419 ----YVQLGEVGKAMIMFSKMLEEQVPATEVTY 447
                ++LGE      M +K L E  P   + Y
Sbjct: 322 RVHKELELGE------MAAKNLFELEPMNSMPY 348



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 63/283 (22%), Positives = 130/283 (45%), Gaps = 20/283 (7%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           + + ++  + L S      +Q A+++HC ++K G        N L+++Y K  +L  A  
Sbjct: 38  KIDEYTLPSVLNSFASMKVMQNAISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIM 97

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +F +M +++ +S+ + + GY+ +  + EA+ LF  +   G   +  A  + L     +  
Sbjct: 98  VFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTV 157

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------------- 218
            +    + A + K G +S+  V  +L+  ++ CG +  A + FD +              
Sbjct: 158 MDFGQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVG 217

Query: 219 --FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
              N   + +L F+ QM A G KP+  TF  +L AC   + +  +  A+  A+   Y + 
Sbjct: 218 YAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFAC-SHNGLLGSGRAYFEAMDKVYGIK 276

Query: 277 LYVA--VALLDLYTKSGEISNARRIFEEM-PKKDVIPWSFMIA 316
                   ++DL  +SG+++ A+ +  +M    D + W  ++A
Sbjct: 277 PGPEHYACMIDLLGRSGKLAEAKGLLNQMVVAPDAVVWKALLA 319


>gi|90399180|emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
          Length = 886

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 239/667 (35%), Positives = 358/667 (53%), Gaps = 42/667 (6%)

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG----------------LFNDC 222
           + A + KLG  S+  +   LID ++ CG +  A +VFDG                L +  
Sbjct: 222 LHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGE 281

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
             E L  F +MR  G  PN FT +  LKAC G    R     HG  ++T +E    VA +
Sbjct: 282 ARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRAGVQIHGVCVRTGFEGHDVVANS 339

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM-RQAFVAP 341
           L+ +Y+K     +ARR+F+ +P +++  W+ MI+ YA      D++ +F  M R+    P
Sbjct: 340 LVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQP 399

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHS-LVVR-VGLLSDVFVSNALMDVYAKCGRMENSVE 399
           ++FTF S+L+AC+ +     G Q+H+ + VR V   S+  ++ AL+DVY KC R+  +++
Sbjct: 400 DEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQ 459

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +F    +RN + W T+IVG+ Q G+V +AM +F +     V A     SSV+   A  A 
Sbjct: 460 VFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFAL 519

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
           +E G QVHC T K    +DV VAN+L+DMY KCG   +A   F  M   N VSW AMI+G
Sbjct: 520 VEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMING 579

Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
              HG   E + +F+ MQ  G   + + ++ +LSACS+ GL+++   YF  +  +  + P
Sbjct: 580 VGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRP 639

Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHI 639
             EHY  MV LLGRAG L +A +LI  +P +P+V +W+ LL AC +H +V +GR     +
Sbjct: 640 KAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDVL 699

Query: 640 LDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYF-RA 687
           L  + ++   +V+LSNI A A  W            K   K+ G SW E    VH+F   
Sbjct: 700 LAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDKEVHFFYGG 759

Query: 688 GDTSHADMNIIRGMLEWLNMKSR-KAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFA 746
           GD +H     IR  L  +  + R + GY  D    L DV E+ +   L  HSE+LA+   
Sbjct: 760 GDDAHPQAGDIRRALREVEARMRERLGYSGDARCALHDVDEESRVESLREHSERLAVGLW 819

Query: 747 LFKMPPSSP--------IRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGC 798
           L +              +R+ KNLR+C DCH  +K +S +V+R +++RD +RFH FQ+G 
Sbjct: 820 LLRDGTGDDGGGGGGEVVRVYKNLRVCGDCHEFLKGLSAVVRRVVVVRDANRFHRFQNGA 879

Query: 799 CSCGDFW 805
           CSC D+W
Sbjct: 880 CSCRDYW 886



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 206/407 (50%), Gaps = 16/407 (3%)

Query: 232 QMRAV---GFKP--NNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           Q+RA+   GF P       A +L+A     ++R     H   +K  +  D  +   L+D+
Sbjct: 185 QLRAIDLLGFLPMERRRMIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDM 244

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y K G++  A  +F+ MP+++V+ W+ ++  +     + + + LF  MR +  +PN+FT 
Sbjct: 245 YAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTL 304

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
            + L+AC    G   G QIH + VR G      V+N+L+ +Y+K     ++  +F   P 
Sbjct: 305 SATLKACGG--GTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPS 362

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE--EQVPATEVTYSSVLRACASLAALEPGM 464
           RN  TWN+MI GY   G+   ++++F +M    ++ P  E T++S+L+AC+ L A   G 
Sbjct: 363 RNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQP-DEFTFASLLKACSGLGAAREGA 421

Query: 465 QVH-CLTVKA-NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           QVH  + V+  +   + ++A AL+D+Y KC  +  A  VFD +   N + W  +I G++ 
Sbjct: 422 QVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQ 481

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG-EAYFKSMVANYGIEPCI 581
            G   E + +F      G R +      V++  ++  L+EQG + +  +     G++  +
Sbjct: 482 EGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSV 541

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
            +  S+V +  + G   +A +    +P + +V+ W A++     H +
Sbjct: 542 AN--SLVDMYLKCGLTGEAGRRFREMPAR-NVVSWTAMINGVGKHGH 585



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 142/546 (26%), Positives = 238/546 (43%), Gaps = 48/546 (8%)

Query: 60  ATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPE 119
           A  L++  +   L+  + +H  ++K G   D    N L+++Y K  +L  A ++FD MPE
Sbjct: 204 ADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPE 263

Query: 120 RNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCV 179
           RN +S+   + G+    +  E + LF  +   G   N F  +A LK     G       +
Sbjct: 264 RNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLK--ACGGGTRAGVQI 321

Query: 180 FACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-------GLFNDCF--------- 223
                + G + +  V  +L+  +S       AR+VFD         +N            
Sbjct: 322 HGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQG 381

Query: 224 EEALNFFSQM-RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGC-ALKTCYEM-DLYVA 280
            ++L  F +M R    +P+ FTFA +LKAC GL   R     H   A++      +  +A
Sbjct: 382 RDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILA 441

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
            ALLD+Y K   +  A ++F+ + +++ I W+ +I  +AQ     +A+ LF R   + V 
Sbjct: 442 GALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVR 501

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
            +     SV+   A    ++ G Q+H    +     DV V+N+L+D+Y KCG    +   
Sbjct: 502 ADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRR 561

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F E P RN V+W  MI G  + G   +A+ +F +M  E V A EV Y ++L AC+     
Sbjct: 562 FREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACS----- 616

Query: 461 EPGMQVHCLTVKANYDMDVVVANA------LIDMYAKCGSITDAR-LVFDMMNDWNEVSW 513
             G+   C    +    D  +         ++D+  + G + +A+ L+  M  +     W
Sbjct: 617 HSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVW 676

Query: 514 NAMISGYSMHGLSAEVLKVFD-LMQQRGWRPNNLTFV--------------GVLSACSNG 558
             ++S   +H   A   +V D L+   G  P N   +              G+  A    
Sbjct: 677 QTLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRK 736

Query: 559 GLLEQG 564
           GL +QG
Sbjct: 737 GLRKQG 742


>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 207/532 (38%), Positives = 313/532 (58%), Gaps = 13/532 (2%)

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV--APNQF 344
           Y  +G + +  R+F+EMP ++VI W+ MI    Q   S +A+ LF +M    V   P   
Sbjct: 129 YCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSS 188

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           T+  V+ ACA    L  G QIH+ V ++G   D ++S AL+  YA C +ME+S+ +F   
Sbjct: 189 TYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGK 248

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
              N V W  ++ GY    +   A+ +F +M+ E V   + +++S L +C  L AL+ G 
Sbjct: 249 LHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGR 308

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
           ++H   VK   + DV V N+LI MY +CG++ D  ++F  ++  N VSWN++I G + HG
Sbjct: 309 EIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHG 368

Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY 584
                L  F+ M +    P+ +TF G+LSACS+ G+ ++G   FK    N   E  ++HY
Sbjct: 369 CGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHY 428

Query: 585 TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEP 644
             MV +LGR+G L++A +LI  +P + + M+W  LL AC +H+ +E+   +A+ I+D EP
Sbjct: 429 ACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEP 488

Query: 645 EDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHA 693
              + +VLLSN+YA A  W           ++  +K+PG SWI  +G  + F +GD SH 
Sbjct: 489 HCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHP 548

Query: 694 DMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPS 753
             + I   LEWL  K ++ GY+PD    L DV +++KE  L  HSE+LA+ F L      
Sbjct: 549 SSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLISTVEG 608

Query: 754 SPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           S I ++KNLR+C DCH+AIK+I+KIV+R+II+RD  RFHHF DG CSCGD+W
Sbjct: 609 STITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 660



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 208/444 (46%), Gaps = 39/444 (8%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTL- 148
           D+ + N ++        L  A KLFDEMPER+ +S+ T I G+    +   A GLF  + 
Sbjct: 56  DVVSWNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMP 115

Query: 149 HREGHELNP--FAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCG 206
            R+    N   + +    +V   +   +  PC            N    T++I      G
Sbjct: 116 FRDIAAWNSMIYGYCCNGRVEDGLRLFQEMPC-----------RNVISWTSMIG-----G 159

Query: 207 CVEFARKVFDGLFNDCFEEALNFFSQMRAVGF--KPNNFTFAFVLKACLGLDTIRVAKSA 264
             +  R           EEAL  F QM   G   KP + T+  V+ AC     +      
Sbjct: 160 LDQHGRS----------EEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQI 209

Query: 265 HGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLS 324
           H    K  Y  D Y++ AL+  Y    ++ ++ R+F      +V+ W+ ++  Y      
Sbjct: 210 HAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKH 269

Query: 325 IDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNAL 384
            DA+++F  M +  V PNQ +F S L +C  +E LD G +IH+  V++GL +DVFV N+L
Sbjct: 270 EDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSL 329

Query: 385 MDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATE 444
           + +Y +CG + + V +F    K+N V+WN++IVG  Q G    A+  F++M+   V   E
Sbjct: 330 IVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDE 389

Query: 445 VTYSSVLRACASLAALEPGMQVHCL--TVKANYDMDVVVAN--ALIDMYAKCGSITDA-R 499
           +T++ +L AC+     + G    CL      N   +V + +   ++D+  + G + +A  
Sbjct: 390 ITFTGLLSACSHSGMSQKG---RCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEE 446

Query: 500 LVFDMMNDWNEVSWNAMISGYSMH 523
           L+ +M    N + W  ++S  +MH
Sbjct: 447 LIRNMPVKANSMVWLVLLSACTMH 470



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 170/370 (45%), Gaps = 35/370 (9%)

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           + ++  I  AR +F+++   DV  ++ MI  YA+      A++LF  M       +  ++
Sbjct: 5   HLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEM----PVKDVVSW 60

Query: 347 VSVLQACATMEGLDLGN----------------------QIHSLVVRVGL-----LSDVF 379
            S+++ C     L +                        Q   + V  GL       D+ 
Sbjct: 61  NSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIA 120

Query: 380 VSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML--E 437
             N+++  Y   GR+E+ + LF E P RN ++W +MI G  Q G   +A+ +F +M+   
Sbjct: 121 AWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCG 180

Query: 438 EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITD 497
            +V  T  TY  V+ ACA+ +AL  G+Q+H    K  Y  D  ++ ALI  YA C  + D
Sbjct: 181 VEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMED 240

Query: 498 ARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSN 557
           +  VF      N V W A+++GY ++    + LKVF  M + G  PN  +F   L++C  
Sbjct: 241 SLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCG 300

Query: 558 GGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWR 617
              L+ G     + V   G+E  +    S++ +  R G+L+    + + I  + +++ W 
Sbjct: 301 LEALDWGREIHTAAV-KLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRIS-KKNIVSWN 358

Query: 618 ALLGACIIHN 627
           +++  C  H 
Sbjct: 359 SVIVGCAQHG 368



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 111/273 (40%), Gaps = 25/273 (9%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
            S +Y   + +C     L   + IH  V K G   D + +  L+  Y    ++ D+ ++F
Sbjct: 186 TSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVF 245

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
                 N + +   + GY ++ +  +A+ +F  + REG   N  +FT+ L     +   +
Sbjct: 246 HGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALD 305

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
               +     KLG +++ FVG +LI  +  CG +     +F  +                
Sbjct: 306 WGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCA 365

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALK-----TCY 273
            + C   AL FF+QM     +P+  TF  +L AC      +  +    C  K        
Sbjct: 366 QHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGR----CLFKYFSENKSA 421

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKK 306
           E+ L     ++D+  +SG++  A  +   MP K
Sbjct: 422 EVKLDHYACMVDILGRSGKLEEAEELIRNMPVK 454



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 105/262 (40%), Gaps = 34/262 (12%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  S+ ++L SC   + L     IH   +K G   D+F  N L+ +Y +   L D   +F
Sbjct: 287 NQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIF 346

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             + ++N +S+ + I G       + A+  F+ + R   E +   FT  L      G ++
Sbjct: 347 KRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQ 406

Query: 175 LCPCVF-------ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEAL 227
              C+F       +   KL H +       ++D     G +E A ++             
Sbjct: 407 KGRCLFKYFSENKSAEVKLDHYA------CMVDILGRSGKLEEAEEL------------- 447

Query: 228 NFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL-DL 286
                +R +  K N+  +  +L AC     + VA+ A  C +    E     A  LL +L
Sbjct: 448 -----IRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDL--EPHCSSAYVLLSNL 500

Query: 287 YTKSGEISNARRIFEEMPKKDV 308
           Y  +   S+  RI  EM ++ +
Sbjct: 501 YASASRWSDVSRIRREMKQRGI 522


>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
          Length = 748

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 221/571 (38%), Positives = 329/571 (57%), Gaps = 47/571 (8%)

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           A++F+ +M   G +PN++TF F+LK+C  +   +  K  HG  LK   E D +V  +L++
Sbjct: 116 AIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLIN 175

Query: 286 LYTKSGEIS-------------------------------NARRIFEEMPKKDVIPWSFM 314
           +Y ++GE+                                +ARR+FEE+P +D + W+ M
Sbjct: 176 MYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAM 235

Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL 374
           IA YAQ+    +A+  F  M++A VAPN+ T V+VL ACA    L+LGN + S +   GL
Sbjct: 236 IAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGL 295

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
            S++ + NAL+D+Y+KCG ++ + +LF    +++ ++WN MI GY  +    +A+ +F K
Sbjct: 296 GSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRK 355

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM-DVVVANALIDMYAKCG 493
           M +  V   +VT+ S+L ACA L AL+ G  +H    K    + +  +  +LIDMYAKCG
Sbjct: 356 MQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCG 415

Query: 494 SITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLS 553
           +I  A+ VF  M   +  SWNAMISG +MHG +   L++F  M+  G+ P+++TFVGVLS
Sbjct: 416 NIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLS 475

Query: 554 ACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSV 613
           ACS+ GL+E G   F SMV +Y I P ++HY  M+ LLGRAG  D+A  L++ +  +P  
Sbjct: 476 ACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDG 535

Query: 614 MIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAASKEPGL 673
            IW +LLGAC +H NVE+G  +A+H+ + EPE+   +VLLSNIYA A  W+  A     L
Sbjct: 536 AIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKL 595

Query: 674 SWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMK-SRKAGYIPDLSAVLRDVREDEKER 732
           +              D        I  ML+ ++     + G +PD S VL D+ E+ KE 
Sbjct: 596 N--------------DKGMKKXQDIYKMLDEIDQSFGERPGXVPDTSEVLYDMDEEWKEG 641

Query: 733 YLWVHSEKLALAFALFKMPPSSPIRIIKNLR 763
            L  HSEKLA+AF L    P + IRI+KNLR
Sbjct: 642 SLSHHSEKLAIAFGLISTKPETTIRIVKNLR 672



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 146/524 (27%), Positives = 244/524 (46%), Gaps = 57/524 (10%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLN--VYVKLNRLPDAT 111
             +H   T L +C      Q    IH Q++K G     FA + L+          L  A 
Sbjct: 30  LQNHPSLTLLSTC---KSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYAL 86

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
            LF+ + + N   + T I+G ++SS  V A+  +  +   G E N + F   LK    +G
Sbjct: 87  LLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVG 146

Query: 172 WAELCPCVFACVYKLGHDSNAFVG-------------------------------TALID 200
             +    +   V KLG +S+ FV                                TALI 
Sbjct: 147 ATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALIT 206

Query: 201 AFSVCGCVEFARKVFDGL-FNDC---------------FEEALNFFSQMRAVGFKPNNFT 244
            +++ GC++ AR++F+ +   D                FEEAL FF +M+     PN  T
Sbjct: 207 GYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNEST 266

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
              VL AC    ++ +               +L +  AL+D+Y+K G++  AR +FE + 
Sbjct: 267 MVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGIC 326

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
           +KD+I W+ MI  Y+  +   +A+ LF +M+Q+ V PN  TFVS+L ACA +  LDLG  
Sbjct: 327 EKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKW 386

Query: 365 IHSLVVRVGL-LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
           IH+ + +  L L++  +  +L+D+YAKCG +E + ++FA    ++  +WN MI G    G
Sbjct: 387 IHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHG 446

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN 483
               A+ +F +M +E     ++T+  VL AC+    +E G Q     V+ +YD+   + +
Sbjct: 447 HANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVE-DYDISPKLQH 505

Query: 484 --ALIDMYAKCGSITDAR-LVFDMMNDWNEVSWNAMISGYSMHG 524
              +ID+  + G   +A  L+ +M    +   W +++    +HG
Sbjct: 506 YGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHG 549



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 121/420 (28%), Positives = 202/420 (48%), Gaps = 36/420 (8%)

Query: 262 KSAHGCALKTCYEMDLYVAVALLDLYTKS--GEISNARRIFEEMPKKDVIPWSFMIARYA 319
           K  H   +KT      +    L++    S  G +S A  +FE + + +   W+ MI   +
Sbjct: 49  KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNS 108

Query: 320 QTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVF 379
            +   + A++ + RM    V PN +TF  +L++CA +     G QIH  V+++GL SD F
Sbjct: 109 LSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPF 168

Query: 380 VSNALMDVYAKCGRM-------------------------------ENSVELFAESPKRN 408
           V  +L+++YA+ G +                               +++  LF E P R+
Sbjct: 169 VHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRD 228

Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHC 468
            V+WN MI GY Q G   +A+  F +M    V   E T  +VL ACA   +LE G  V  
Sbjct: 229 AVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRS 288

Query: 469 LTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAE 528
                    ++ + NALIDMY+KCG +  AR +F+ + + + +SWN MI GYS      E
Sbjct: 289 WIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKE 348

Query: 529 VLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMV 588
            L +F  MQQ    PN++TFV +L AC+  G L+ G+     +   +        +TS++
Sbjct: 349 ALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLI 408

Query: 589 SLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD--FEPED 646
            +  + G+++ A ++  G+  + S+  W A++    +H +  +     + + D  FEP+D
Sbjct: 409 DMYAKCGNIEAAKQVFAGMKPK-SLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDD 467



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 132/519 (25%), Positives = 221/519 (42%), Gaps = 64/519 (12%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRL----- 107
           E NS+++   L+SC +    Q    IH  VLK G   D F    L+N+Y +   L     
Sbjct: 129 EPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAEL 188

Query: 108 --------------------------PDATKLFDEMPERNTISFVTTIQGYTVSSQFVEA 141
                                      DA +LF+E+P R+ +S+   I GY  S +F EA
Sbjct: 189 VFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEA 248

Query: 142 VGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDA 201
           +  F  + R     N       L      G  EL   V + +   G  SN  +  ALID 
Sbjct: 249 LAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDM 308

Query: 202 FSVCGCVEFARKVFDGLFN----------------DCFEEALNFFSQMRAVGFKPNNFTF 245
           +S CG ++ AR +F+G+                  + ++EAL  F +M+    +PN+ TF
Sbjct: 309 YSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTF 368

Query: 246 AFVLKACLGLDTIRVAKSAHGCALKTCYEM-DLYVAVALLDLYTKSGEISNARRIFEEMP 304
             +L AC  L  + + K  H    K    + +  +  +L+D+Y K G I  A+++F  M 
Sbjct: 369 VSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMK 428

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ 364
            K +  W+ MI+  A    +  A+ELF +MR     P+  TFV VL AC+    ++LG Q
Sbjct: 429 PKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQ 488

Query: 365 -IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE-SPKRNHVTWNTM-----IV 417
              S+V    +   +     ++D+  + G  + +  L      K +   W ++     + 
Sbjct: 489 CFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVH 548

Query: 418 GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA---SLAALEPGMQVHCLTVKAN 474
           G V+LGE   A  +F   LE + P   V  S++         +A +    +++   +K  
Sbjct: 549 GNVELGEFA-AKHLFE--LEPENPGAYVLLSNIYATAGRWDDVARIR--TKLNDKGMKKX 603

Query: 475 YDMDVVVANALIDMYAKCGSITD-ARLVFDMMNDWNEVS 512
            D+  ++         + G + D + +++DM  +W E S
Sbjct: 604 QDIYKMLDEIDQSFGERPGXVPDTSEVLYDMDEEWKEGS 642


>gi|15237212|ref|NP_200075.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
 gi|75180446|sp|Q9LTF4.1|PP429_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g52630
 gi|8953718|dbj|BAA98081.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332008860|gb|AED96243.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
          Length = 588

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 215/552 (38%), Positives = 329/552 (59%), Gaps = 12/552 (2%)

Query: 265 HGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLS 324
           HG  +K+   +   VA  L++ Y+KS    ++RR FE+ P+K    WS +I+ +AQ +L 
Sbjct: 38  HGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELP 97

Query: 325 IDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNAL 384
             ++E   +M    + P+     S  ++CA +   D+G  +H L ++ G  +DVFV ++L
Sbjct: 98  WMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSL 157

Query: 385 MDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATE 444
           +D+YAKCG +  + ++F E P+RN VTW+ M+ GY Q+GE  +A+ +F + L E +   +
Sbjct: 158 VDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVND 217

Query: 445 VTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDM 504
            ++SSV+  CA+   LE G Q+H L++K+++D    V ++L+ +Y+KCG    A  VF+ 
Sbjct: 218 YSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNE 277

Query: 505 MNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG 564
           +   N   WNAM+  Y+ H  + +V+++F  M+  G +PN +TF+ VL+ACS+ GL+++G
Sbjct: 278 VPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEG 337

Query: 565 EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACI 624
             YF  M  +  IEP  +HY S+V +LGRAG L +A ++I  +P  P+  +W ALL +C 
Sbjct: 338 RYYFDQMKESR-IEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCT 396

Query: 625 IHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGL 673
           +H N E+   +A  + +  P     H+ LSN YA    +E AA            KE GL
Sbjct: 397 VHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGL 456

Query: 674 SWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERY 733
           SW+E +  VH F AG+  H     I   L  L  +  KAGYI D S VLR+V  DEK + 
Sbjct: 457 SWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKNQT 516

Query: 734 LWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHH 793
           +  HSE+LA+AF L   P   PIR++KNLR+C DCH AIK +S   +R II+RD +RFH 
Sbjct: 517 IRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHR 576

Query: 794 FQDGCCSCGDFW 805
           F+DG CSC D+W
Sbjct: 577 FEDGKCSCNDYW 588



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 160/299 (53%), Gaps = 1/299 (0%)

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           +L F  +M A   +P++       K+C  L    + +S H  ++KT Y+ D++V  +L+D
Sbjct: 100 SLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVD 159

Query: 286 LYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFT 345
           +Y K GEI  AR++F+EMP+++V+ WS M+  YAQ   + +A+ LF       +A N ++
Sbjct: 160 MYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYS 219

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           F SV+  CA    L+LG QIH L ++    S  FV ++L+ +Y+KCG  E + ++F E P
Sbjct: 220 FSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVP 279

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
            +N   WN M+  Y Q     K + +F +M    +    +T+ +VL AC+    ++ G  
Sbjct: 280 VKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRY 339

Query: 466 VHCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
                 ++  +       +L+DM  + G + +A  ++ +M  D  E  W A+++  ++H
Sbjct: 340 YFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVH 398



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 148/296 (50%), Gaps = 4/296 (1%)

Query: 337 AFVAP--NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
           AF  P  N      +L + A       G Q+H  VV+ GL     V+N L++ Y+K    
Sbjct: 7   AFFVPCHNYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLP 66

Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
            +S   F +SP+++  TW+++I  + Q      ++    KM+   +   +    S  ++C
Sbjct: 67  FDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSC 126

Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
           A L+  + G  VHCL++K  YD DV V ++L+DMYAKCG I  AR +FD M   N V+W+
Sbjct: 127 AILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWS 186

Query: 515 AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
            M+ GY+  G + E L +F          N+ +F  V+S C+N  LLE G      +   
Sbjct: 187 GMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQ-IHGLSIK 245

Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
              +      +S+VSL  + G  + A ++   +P + ++ IW A+L A   H++ +
Sbjct: 246 SSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVK-NLGIWNAMLKAYAQHSHTQ 300



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 89/354 (25%), Positives = 174/354 (49%), Gaps = 30/354 (8%)

Query: 75  AMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLP-DATKLFDEMPERNTISFVTTIQGYT 133
            + +H  V+K G  L     N L+N Y K ++LP D+ + F++ P++++ ++ + I  + 
Sbjct: 34  GLQLHGYVVKSGLSLIPLVANNLINFYSK-SQLPFDSRRAFEDSPQKSSTTWSSIISCFA 92

Query: 134 ------VSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLG 187
                 +S +F++ + +   L  + H L P A     K    +   ++   V     K G
Sbjct: 93  QNELPWMSLEFLKKM-MAGNLRPDDHVL-PSA----TKSCAILSRCDIGRSVHCLSMKTG 146

Query: 188 HDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF----------------EEALNFFS 231
           +D++ FVG++L+D ++ CG + +ARK+FD +                     EEAL  F 
Sbjct: 147 YDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFK 206

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
           +        N+++F+ V+  C     + + +  HG ++K+ ++   +V  +L+ LY+K G
Sbjct: 207 EALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCG 266

Query: 292 EISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQ 351
               A ++F E+P K++  W+ M+  YAQ   +   +ELF RM+ + + PN  TF++VL 
Sbjct: 267 VPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLN 326

Query: 352 ACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           AC+    +D G      +    +        +L+D+  + GR++ ++E+    P
Sbjct: 327 ACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMP 380



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 123/266 (46%), Gaps = 16/266 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           + H   ++ +SC          ++HC  +K G   D+F  + L+++Y K   +  A K+F
Sbjct: 115 DDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMF 174

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           DEMP+RN +++   + GY    +  EA+ LF     E   +N ++F++ + V  +    E
Sbjct: 175 DEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLE 234

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-------GLFNDCF---- 223
           L   +     K   DS++FVG++L+  +S CG  E A +VF+       G++N       
Sbjct: 235 LGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYA 294

Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                ++ +  F +M+  G KPN  TF  VL AC     +   +       ++  E    
Sbjct: 295 QHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDK 354

Query: 279 VAVALLDLYTKSGEISNARRIFEEMP 304
              +L+D+  ++G +  A  +   MP
Sbjct: 355 HYASLVDMLGRAGRLQEALEVITNMP 380


>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
 gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
          Length = 635

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 211/574 (36%), Positives = 317/574 (55%), Gaps = 59/574 (10%)

Query: 291 GEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVL 350
           G++  AR++F+ +P+  V  W+ M   Y++       V L+  M +  V P+ +T+  + 
Sbjct: 62  GDMCYARQLFDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLF 121

Query: 351 QACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCG------------------ 392
           +       L LG ++H  VV+ GL S+VF  NAL+++Y+ CG                  
Sbjct: 122 KGFTRSVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVV 181

Query: 393 ----------RMENSV--------------------ELFAESPKRNHVTWNTMIVGYVQL 422
                     R++  V                    + F + P+R+HV+W  MI GY++L
Sbjct: 182 TWNAMISGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRL 241

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
               +A+++F +M   ++   E T  SVL ACA L ALE G  +     K     D  V 
Sbjct: 242 NCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVG 301

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
           NALIDMY KCG++  A  +F+ +   ++ +W AM+ G +++G   E L +F  M +    
Sbjct: 302 NALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVT 361

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           P+ +T+VGVLSAC++ G++++G+ +F SM A +GIEP I HY  MV LLG+AGHL +A +
Sbjct: 362 PDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHE 421

Query: 603 LIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARS 662
           +I+ +P +P+ ++W ALLGAC IH + E+   + + IL+ EP + A +VL  NIYA    
Sbjct: 422 IIKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIYAACNK 481

Query: 663 WEK-----------AASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRK 711
           W+K              K PG S IE  G+VH F AGD SH     I G L  +    + 
Sbjct: 482 WDKLRELRQVMMDRGIKKTPGCSLIEMNGIVHEFVAGDQSHPQTKEIYGKLNKMTSDLKI 541

Query: 712 AGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTA 771
           AGY P+ S V  D+ E++KE  ++ HSEKLA+AF L    P   IRI+KNLR+C+DCH  
Sbjct: 542 AGYSPNTSEVFLDIAEEDKENAVYRHSEKLAIAFGLINSGPGVTIRIVKNLRMCIDCHHV 601

Query: 772 IKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            K++SK+  RE+I+RD  RFHHF+ G CSC D+W
Sbjct: 602 AKLVSKVYDREVIVRDRTRFHHFRHGSCSCKDYW 635



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 125/459 (27%), Positives = 218/459 (47%), Gaps = 59/459 (12%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYV--KLNRLPDATKLFDEMPERNTISFVTTIQGYTVS 135
           IH + +K G   +    N +L+     +   +  A +LFD +PE +  S+    +GY+  
Sbjct: 33  IHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDTIPEPSVFSWNIMFKGYSR- 91

Query: 136 SQFVEAVGLFSTLHREGHELN--------PFAFTAFLK-VLVSMGWAELCPCVFACVYKL 186
              +    L  +L+ E  E N        PF F  F + V + +G    C  V     K 
Sbjct: 92  ---IACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGRELHCHVV-----KY 143

Query: 187 GHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFA 246
           G DSN F   ALI+ +S+CG ++ AR +FD     C  + + + + +             
Sbjct: 144 GLDSNVFAHNALINMYSLCGLIDMARGIFD---MSCKSDVVTWNAMISGYN--------- 191

Query: 247 FVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK 306
                       R+ K             D+    A++  +  +G++  AR+ F +MP++
Sbjct: 192 ------------RIKK-------------DVISWTAIVTGFVNTGQVDAARKYFHKMPER 226

Query: 307 DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIH 366
           D + W+ MI  Y + +   +A+ LF  M+ + + P++FT VSVL ACA +  L+LG  I 
Sbjct: 227 DHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIR 286

Query: 367 SLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVG 426
           + + +  + +D FV NAL+D+Y KCG +E ++ +F   P+R+  TW  M+VG    G   
Sbjct: 287 TYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGE 346

Query: 427 KAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHC-LTVKANYDMDVVVANAL 485
           +A+ MFS+ML+  V   EVTY  VL AC     ++ G +    +T +   + ++     +
Sbjct: 347 EALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCM 406

Query: 486 IDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
           +D+  K G + +A  ++ +M    N + W A++    +H
Sbjct: 407 VDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGACRIH 445



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 90/356 (25%), Positives = 154/356 (43%), Gaps = 56/356 (15%)

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMD--VYAKCGRMENSVELFAES 404
           +S+ + C +M  L    QIHS  ++ G++ +  + N ++      + G M  + +LF   
Sbjct: 18  LSLFETCKSMYHL---KQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDTI 74

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
           P+ +  +WN M  GY ++      + ++ +MLE  V     TY  + +      AL+ G 
Sbjct: 75  PEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGR 134

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS--- 521
           ++HC  VK   D +V   NALI+MY+ CG I  AR +FDM    + V+WNAMISGY+   
Sbjct: 135 ELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRIK 194

Query: 522 -------------------------MHGLS--------------------AEVLKVFDLM 536
                                     H +                      E L +F  M
Sbjct: 195 KDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREM 254

Query: 537 QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGH 596
           Q    +P+  T V VL+AC+  G LE GE + ++ +    ++       +++ +  + G+
Sbjct: 255 QTSKIKPDEFTMVSVLTACAQLGALELGE-WIRTYIDKNKVKNDTFVGNALIDMYFKCGN 313

Query: 597 LDKAAKLIEGIPFQPSVMIWRAL-LGACIIHNNVEIGRLSAQHILDFEPEDEATHV 651
           ++ A  +   +P Q     W A+ +G  I     E   + +Q +      DE T+V
Sbjct: 314 VEMALSIFNTLP-QRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYV 368



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 122/317 (38%), Gaps = 78/317 (24%)

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVY------------------------------ 101
           LQ    +HC V+K G   ++FA N L+N+Y                              
Sbjct: 130 LQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISG 189

Query: 102 ------------------VKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVG 143
                             V   ++  A K F +MPER+ +S+   I GY   + + EA+ 
Sbjct: 190 YNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALM 249

Query: 144 LFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFS 203
           LF  +     + + F   + L     +G  EL   +   + K    ++ FVG ALID + 
Sbjct: 250 LFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYF 309

Query: 204 VCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAF 247
            CG VE A  +F+ L                 N C EEALN FSQM      P+  T+  
Sbjct: 310 KCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVG 369

Query: 248 VLKACLGLDTIRVAK-------SAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIF 300
           VL AC     +   K       + HG       E ++     ++DL  K+G +  A  I 
Sbjct: 370 VLSACTHTGMVDEGKKFFASMTARHG------IEPNIAHYGCMVDLLGKAGHLKEAHEII 423

Query: 301 EEMP-KKDVIPWSFMIA 316
           + MP K + I W  ++ 
Sbjct: 424 KNMPMKPNSIVWGALLG 440



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 45/252 (17%), Positives = 98/252 (38%), Gaps = 28/252 (11%)

Query: 3   RLFNYKTFSCKQLTHQSKINAWLR-GLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYAT 61
           R + +K      ++  + I+ +LR     +A +  ++   S   P  F++         +
Sbjct: 217 RKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTM--------VS 268

Query: 62  SLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERN 121
            L +C Q   L+    I   + K     D F  N L+++Y K   +  A  +F+ +P+R+
Sbjct: 269 VLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRD 328

Query: 122 TISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFA 181
             ++   + G  ++    EA+ +FS + +     +   +   L      G  +     FA
Sbjct: 329 KFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKKFFA 388

Query: 182 CVY-KLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKP 240
            +  + G + N      ++D     G ++ A ++                  ++ +  KP
Sbjct: 389 SMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEI------------------IKNMPMKP 430

Query: 241 NNFTFAFVLKAC 252
           N+  +  +L AC
Sbjct: 431 NSIVWGALLGAC 442


>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 802

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 222/638 (34%), Positives = 348/638 (54%), Gaps = 60/638 (9%)

Query: 223 FEEALNFFSQM----RAVGF-----KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY 273
           FEE +  F Q      AV +     +P+   ++ ++ ACL    + + K  H     + +
Sbjct: 35  FEEIIELFCQQNRLKEAVDYLHRIPQPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNF 94

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
              + ++  L+ +Y K G + +A+ +F+E+P+KD+  W+ MI+ YA       A +LF  
Sbjct: 95  IPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDE 154

Query: 334 MRQAFVAPNQFTFVSVLQACAT----MEGLDL---------------------------- 361
           M       + F++ +V+    +    ME LDL                            
Sbjct: 155 MPHR----DNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAIS 210

Query: 362 ----GNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIV 417
               G +IH  ++R GL  D  V  AL+D+Y KCG +  +  +F +   ++ V+W TMI 
Sbjct: 211 SLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIH 270

Query: 418 GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM 477
              + G   +   +F  ++   V   E T++ VL ACA LAA + G +VH    +  YD 
Sbjct: 271 RCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDP 330

Query: 478 DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQ 537
               A+AL+ +Y+KCG+   AR VF+ M   + VSW ++I GY+ +G     L+ F+ + 
Sbjct: 331 FSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLL 390

Query: 538 QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHL 597
           + G +P+ +TFVGVLSAC++ GL++ G  YF S+   +G+    +HY  ++ LL R+G  
Sbjct: 391 RSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRF 450

Query: 598 DKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIY 657
            +A  +I+ +P +P   +W +LLG C IH N+E+   +A+ + + EPE+ AT++ LSNIY
Sbjct: 451 KEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPENPATYITLSNIY 510

Query: 658 AMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLN 706
           A A  W            +   K+PG SWIE +  VH F  GDTSH  ++ I   L  L+
Sbjct: 511 ANAGLWTEETKVRNDMDNRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKISDIHEYLGELS 570

Query: 707 MKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICV 766
            K ++ GY+ D + VL DV E++KE+ ++ HSEKLA+AF +    P +PI++ KNLR CV
Sbjct: 571 KKMKEEGYVADTNFVLHDVEEEQKEQNIFYHSEKLAVAFGIISTSPGTPIKVFKNLRTCV 630

Query: 767 DCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
           DCH A+K ISKIVQR+II+RD +RFH F DG CSC D+
Sbjct: 631 DCHNAMKYISKIVQRKIIVRDSNRFHCFVDGSCSCKDY 668



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 187/385 (48%), Gaps = 27/385 (7%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           DL + N +++ Y  + R+  A KLFDEMP R+  S+   I GY     ++EA+ LF  + 
Sbjct: 128 DLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQ 187

Query: 150 R-EGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCV 208
             E    N F  ++ L    ++        +   + + G + +  V TAL+D +  CG +
Sbjct: 188 ENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSL 247

Query: 209 EFARKVFD-----------GLFNDCFE-----EALNFFSQMRAVGFKPNNFTFAFVLKAC 252
             AR +FD            + + CFE     E  + F  +   G +PN +TFA VL AC
Sbjct: 248 NEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNAC 307

Query: 253 LGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWS 312
             L   ++ K  HG   +  Y+   + A AL+ +Y+K G    ARR+F +MP+ D++ W+
Sbjct: 308 ADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWT 367

Query: 313 FMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVR 371
            +I  YAQ      A++ F  + ++   P++ TFV VL AC     +D+G    HS+  +
Sbjct: 368 SLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEK 427

Query: 372 VGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTM-----IVGYVQLGEV 425
            GL+        ++D+ A+ GR + +  +    P K +   W ++     I G ++L E 
Sbjct: 428 HGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAER 487

Query: 426 GKAMIMFSKMLEEQVPATEVTYSSV 450
             A  +F   LE + PAT +T S++
Sbjct: 488 A-AKALFE--LEPENPATYITLSNI 509



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 198/405 (48%), Gaps = 29/405 (7%)

Query: 196 TALIDAFSVCGCVEFARKVFDGL-FNDCFE---------------EALNFFSQMRA-VGF 238
             +I  ++  G +E ARK+FD +   D F                EAL+ F  M+     
Sbjct: 133 NTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESS 192

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
             N FT +  L A   + ++R  K  HG  +++  E+D  V  ALLDLY K G ++ AR 
Sbjct: 193 NCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARG 252

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           IF++M  KD++ W+ MI R  +     +   LF  +  + V PN++TF  VL ACA +  
Sbjct: 253 IFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAA 312

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
             +G ++H  + RVG     F ++AL+ VY+KCG  E +  +F + P+ + V+W ++IVG
Sbjct: 313 EQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVG 372

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ-VHCLTVKANYDM 477
           Y Q G+   A+  F  +L       E+T+  VL AC     ++ G++  H +  K     
Sbjct: 373 YAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVH 432

Query: 478 DVVVANALIDMYAKCGSITDARLVFDMMN-DWNEVSWNAMISGYSMHG---LSAEVLK-V 532
                  +ID+ A+ G   +A  + D M    ++  W +++ G  +HG   L+    K +
Sbjct: 433 TADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKAL 492

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
           F+L  +     N  T++ + +  +N GL  + E   ++ + N GI
Sbjct: 493 FELEPE-----NPATYITLSNIYANAGLWTE-ETKVRNDMDNRGI 531



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 113/263 (42%), Gaps = 30/263 (11%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           IH  +++ G  LD      LL++Y K   L +A  +FD+M +++ +S+ T I       +
Sbjct: 218 IHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGR 277

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
             E   LF  L   G   N + F   L     +   ++   V   + ++G+D  +F  +A
Sbjct: 278 KKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASA 337

Query: 198 LIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPN 241
           L+  +S CG  E AR+VF+ +                 N   + AL FF  +   G KP+
Sbjct: 338 LVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPD 397

Query: 242 NFTFAFVLKAC-------LGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
             TF  VL AC       +GL+     K  HG      +  D Y  V  +DL  +SG   
Sbjct: 398 EITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLV----HTADHYACV--IDLLARSGRFK 451

Query: 295 NARRIFEEMP-KKDVIPWSFMIA 316
            A  I + MP K D   W+ ++ 
Sbjct: 452 EAENIIDNMPMKPDKFLWASLLG 474


>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 755

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 222/642 (34%), Positives = 344/642 (53%), Gaps = 62/642 (9%)

Query: 224 EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
           E   + F +M+A G  PN +T + VLK C   + I+  K  H   L+     D+ +  ++
Sbjct: 116 ELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSI 175

Query: 284 LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQT---------------------D 322
           LDLY K  E   A   FE M +KDV+ W+ MI  Y +                      +
Sbjct: 176 LDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWN 235

Query: 323 LSIDAV-----------ELFCRMRQAF-VAPNQFTFVSVLQACATMEGLDLGNQIHSLVV 370
             ID +           +L+C +      +P  F+   +L +  ++  +++G Q+H  V+
Sbjct: 236 TIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSL--VEVGRQLHGRVL 293

Query: 371 RVGLLSDVFVSNALMDVYAKCGRMENSVELFAE----------------SPKRNHVTWNT 414
             GL SD ++ ++L+++Y KCGRM+ +  +  +                 PK   V+W++
Sbjct: 294 TFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSS 353

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
           M+ GYV  G+    M  F  M+ E +     T ++++ ACA+   LE G Q+H    K  
Sbjct: 354 MVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIG 413

Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
             +D  V ++LIDMY+K GS+ DA ++F+ + + N V W +MISG ++HG   E + +F+
Sbjct: 414 LRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFE 473

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
            M   G  PN +TFVGVL+ACS+ GL+E+G  YF+ M   Y I P +EHYTSMV+L GRA
Sbjct: 474 GMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEHYTSMVNLYGRA 533

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLS 654
           GHL +A   I          +WR+ L +C +H N  +G+  ++ +L   P D   ++LLS
Sbjct: 534 GHLIEAKNFIFENSISHFTSVWRSFLSSCRLHKNFNMGKSVSEMLLQSAPSDPDAYILLS 593

Query: 655 NIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLE 703
           N+ +    W++AA            K+PG SW++ +  +H F  GD SH     I   L+
Sbjct: 594 NMCSSNHQWDEAAIVRSLMYQRGVKKQPGQSWVQLKDQIHSFTVGDRSHPQDKEIYSYLD 653

Query: 704 WLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLR 763
            L  + ++ GY  D   V++DV E++ E  +  HSEKLAL F++    P +PIRI+KNLR
Sbjct: 654 SLIGRLKEIGYSLDAKLVMQDVEEEQGEVLISHHSEKLALVFSIINTSPRTPIRIMKNLR 713

Query: 764 ICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           IC DCH   K  S++++REII+RD HRFHHF+   CSCG++W
Sbjct: 714 ICNDCHNFFKYASQLLEREIIVRDTHRFHHFKQSSCSCGEYW 755



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 200/415 (48%), Gaps = 54/415 (13%)

Query: 262 KSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQT 321
           ++ HG   K      L  A  LL LY KS  + +A ++F+E+  K+   W+ +I+ +A+ 
Sbjct: 52  RALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARA 111

Query: 322 DLSIDAV-ELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFV 380
             S + V  LF  M+     PNQ+T  SVL+ C+    +  G  IH+ ++R G+  DV +
Sbjct: 112 AGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVL 171

Query: 381 SNALMDVYAKC-------------------------------GRMENSVELFAESPKRNH 409
            N+++D+Y KC                               G +E S+E+F   P ++ 
Sbjct: 172 ENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDV 231

Query: 410 VTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCL 469
           V+WNT+I G +Q G    A+     M+      + VT+S  L   +SL+ +E G Q+H  
Sbjct: 232 VSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGR 291

Query: 470 TVKANYDMDVVVANALIDMYAKCGSITDARLV-----FDMMNDWN-----------EVSW 513
            +    + D  + ++L++MY KCG +  A  +      + +   N            VSW
Sbjct: 292 VLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSW 351

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA 573
           ++M+SGY  +G   + +K F  M       +  T   ++SAC+N G+LE G+    + + 
Sbjct: 352 SSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQ-IHAYIQ 410

Query: 574 NYGIEPCIEHY--TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH 626
             G+   I+ Y  +S++ +  ++G LD A  + E I  +P+V++W +++  C +H
Sbjct: 411 KIGLR--IDAYVGSSLIDMYSKSGSLDDALMIFEQIK-EPNVVLWTSMISGCALH 462



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 123/515 (23%), Positives = 226/515 (43%), Gaps = 72/515 (13%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           +H    KKG+   L + N LL +YVK + L  A KLFDE+  +NT ++   I G+  ++ 
Sbjct: 54  LHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAG 113

Query: 138 FVEAV-GLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGT 196
             E V  LF  +  +G   N +  ++ LK        +    + A + + G   +  +  
Sbjct: 114 SSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLEN 173

Query: 197 ALIDAFSVCGCVEFARKVF----------------------------------------- 215
           +++D +  C   E+A   F                                         
Sbjct: 174 SILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVS 233

Query: 216 -----DGLFNDCFEE-ALNFFSQMRAVG--FKPNNFTFAFVLKACLGLDTIRVAKSAHGC 267
                DGL    +E  AL     M A G  F P  F+ A +L + L L  + V +  HG 
Sbjct: 234 WNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSL--VEVGRQLHGR 291

Query: 268 ALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM----------------PKKDVIPW 311
            L      D Y+  +L+++Y K G +  A  I +++                PK  ++ W
Sbjct: 292 VLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSW 351

Query: 312 SFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR 371
           S M++ Y       D ++ F  M    +  +  T  +++ ACA    L+ G QIH+ + +
Sbjct: 352 SSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQK 411

Query: 372 VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIM 431
           +GL  D +V ++L+D+Y+K G +++++ +F +  + N V W +MI G    G+  +A+ +
Sbjct: 412 IGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISL 471

Query: 432 FSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMY 489
           F  ML   +   EVT+  VL AC+ +  +E G + +   +K  Y ++  V +  +++++Y
Sbjct: 472 FEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCR-YFRMMKDTYHINPEVEHYTSMVNLY 530

Query: 490 AKCGSITDAR-LVFDMMNDWNEVSWNAMISGYSMH 523
            + G + +A+  +F+         W + +S   +H
Sbjct: 531 GRAGHLIEAKNFIFENSISHFTSVWRSFLSSCRLH 565



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 123/573 (21%), Positives = 233/573 (40%), Gaps = 123/573 (21%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N ++ ++ L+ C + +++Q    IH  +L+ G   D+   N +L++Y+K      A   F
Sbjct: 133 NQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFF 192

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHRE----------------------- 151
           + M E++ +S+   I  Y       +++ +F     +                       
Sbjct: 193 ELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALE 252

Query: 152 --------GHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFS 203
                   G E +P  F+  L ++ S+   E+   +   V   G +S+ ++ ++L++ + 
Sbjct: 253 QLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYG 312

Query: 204 VCGCVE------------FARK--------------------VFDGLFNDCFEEALNFFS 231
            CG ++            F RK                    V   ++N  +E+ +  F 
Sbjct: 313 KCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFR 372

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
            M       +  T A ++ AC     +   K  H    K    +D YV  +L+D+Y+KSG
Sbjct: 373 SMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSG 432

Query: 292 EISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQ 351
            + +A  IFE++ + +V+ W+ MI+  A      +A+ LF  M    + PN+ TFV VL 
Sbjct: 433 SLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLN 492

Query: 352 ACATMEGLDLGNQIHSLVVRVGLLS-DVFVSNALMDVYAKCGRM--------ENSVELFA 402
           AC+ +  ++ G +   ++     ++ +V    +++++Y + G +        ENS+  F 
Sbjct: 493 ACSHVGLIEEGCRYFRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFT 552

Query: 403 E------SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
                  S  R H  +N           +GK++   S+ML +  P+    Y  +   C+S
Sbjct: 553 SVWRSFLSSCRLHKNFN-----------MGKSV---SEMLLQSAPSDPDAYILLSNMCSS 598

Query: 457 -----LAAL------------EPGM-------QVHCLTV-KANYDMDVVV---ANALIDM 488
                 AA+            +PG        Q+H  TV   ++  D  +    ++LI  
Sbjct: 599 NHQWDEAAIVRSLMYQRGVKKQPGQSWVQLKDQIHSFTVGDRSHPQDKEIYSYLDSLIGR 658

Query: 489 YAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
             + G   DA+LV   M D  E     +IS +S
Sbjct: 659 LKEIGYSLDAKLV---MQDVEEEQGEVLISHHS 688



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 63/296 (21%), Positives = 127/296 (42%), Gaps = 54/296 (18%)

Query: 45  TPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKL 104
           +P+TFS++     S +           ++    +H +VL  G   D +  + L+ +Y K 
Sbjct: 265 SPVTFSIALILVSSLSL----------VEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKC 314

Query: 105 NRLPDATKLFDEMP----------------ERNTISFVTTIQGYTVSSQFVEAVGLFSTL 148
            R+  A+ +  ++P                +   +S+ + + GY  + ++ + +  F ++
Sbjct: 315 GRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSM 374

Query: 149 HREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCV 208
             E   ++       +    + G  E    + A + K+G   +A+VG++LID +S  G +
Sbjct: 375 VCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSL 434

Query: 209 EFARKVFD-----------GLFNDCF-----EEALNFFSQMRAVGFKPNNFTFAFVLKAC 252
           + A  +F+            + + C      +EA++ F  M  +G  PN  TF  VL AC
Sbjct: 435 DDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNAC 494

Query: 253 LGLDTIRVAKSAHGC----ALKTCYEMDLYVA--VALLDLYTKSGEISNARR-IFE 301
             +  I       GC     +K  Y ++  V    ++++LY ++G +  A+  IFE
Sbjct: 495 SHVGLIE-----EGCRYFRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFE 545



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 3/150 (2%)

Query: 482 ANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAE-VLKVFDLMQQRG 540
           AN L+ +Y K  ++  A  +FD +   N  +W  +ISG++    S+E V  +F  MQ  G
Sbjct: 70  ANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAGSSELVFSLFREMQADG 129

Query: 541 WRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKA 600
             PN  T   VL  CS    ++ G+     ++ N G+   +    S++ L  +    + A
Sbjct: 130 ACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRN-GVGGDVVLENSILDLYLKCKEFEYA 188

Query: 601 AKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
               E +  +  V+ W  ++GA +   +VE
Sbjct: 189 ESFFE-LMIEKDVVSWNIMIGAYLREGDVE 217


>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Glycine max]
          Length = 711

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 242/719 (33%), Positives = 380/719 (52%), Gaps = 53/719 (7%)

Query: 101 YVKLNRLPDATKLFDE--MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPF 158
           Y +  +L  A K+FDE  +P R   S+   +  Y  + Q  EA+ LF  + +     N  
Sbjct: 32  YARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKMPQR----NTV 87

Query: 159 AFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL 218
           ++   +   +  G       VF  +     D N    T+++  +   G V  A ++F  +
Sbjct: 88  SWNGLISGHIKNGMLSEARRVFDTM----PDRNVVSWTSMVRGYVRNGDVAEAERLFWHM 143

Query: 219 FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            +                    N  ++  +L   L    +  A+           E D+ 
Sbjct: 144 PHK-------------------NVVSWTVMLGGLLQEGRVDDARKL----FDMMPEKDVV 180

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
               ++  Y + G +  AR +F+EMPK++V+ W+ M++ YA+      A +LF  M +  
Sbjct: 181 AVTNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPER- 239

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
              N+ ++ ++L        +   + +   +     +  V V N ++  +   G ++ + 
Sbjct: 240 ---NEVSWTAMLLGYTHSGRMREASSLFDAMP----VKPVVVCNEMIMGFGLNGEVDKAR 292

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            +F    +R++ TW+ MI  Y + G   +A+ +F +M  E +     +  SVL  C SLA
Sbjct: 293 RVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLA 352

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           +L+ G QVH   V++ +D D+ VA+ LI MY KCG++  A+ VF+     + V WN+MI+
Sbjct: 353 SLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMIT 412

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           GYS HGL  E L VF  M   G  P+++TF+GVLSACS  G +++G   F++M   Y +E
Sbjct: 413 GYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVE 472

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P IEHY  +V LLGRA  +++A KL+E +P +P  ++W ALLGAC  H  +++  ++ + 
Sbjct: 473 PGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVEK 532

Query: 639 ILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRA 687
           +   EP++   +VLLSN+YA    W            ++ +K PG SWIE +  VH F  
Sbjct: 533 LAQLEPKNAGPYVLLSNMYAYKGRWRDVEVLREKIKARSVTKLPGCSWIEVEKKVHMFTG 592

Query: 688 GDT-SHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFA 746
           GD+  H +  II  MLE L    R+AGY PD S VL DV E+EK   L  HSEKLA+A+ 
Sbjct: 593 GDSKGHPEQPIIMKMLEKLGGLLREAGYCPDGSFVLHDVDEEEKTHSLGYHSEKLAVAYG 652

Query: 747 LFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           L K+P   PIR++KNLR+C DCH+AIK+I+K+  REII+RD +RFHHF+DG CSC D+W
Sbjct: 653 LLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKDGHCSCKDYW 711



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 215/452 (47%), Gaps = 44/452 (9%)

Query: 95  NVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHE 154
           N L++ ++K   L +A ++FD MP+RN +S+ + ++GY  +    EA  LF  +  +   
Sbjct: 90  NGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHK--- 146

Query: 155 LNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKV 214
            N  ++T  L  L+  G  +    +F     +  + +    T +I  +   G ++ AR +
Sbjct: 147 -NVVSWTVMLGGLLQEGRVDDARKLF----DMMPEKDVVAVTNMIGGYCEEGRLDEARAL 201

Query: 215 FDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTI 258
           FD +                 N   + A   F  M     + N  ++  +L        +
Sbjct: 202 FDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMP----ERNEVSWTAMLLGYTHSGRM 257

Query: 259 RVAKSAHGC----ALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFM 314
           R A S         +  C EM +   +        +GE+  ARR+F+ M ++D   WS M
Sbjct: 258 REASSLFDAMPVKPVVVCNEMIMGFGL--------NGEVDKARRVFKGMKERDNGTWSAM 309

Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL 374
           I  Y +    ++A+ LF RM++  +A N  + +SVL  C ++  LD G Q+H+ +VR   
Sbjct: 310 IKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEF 369

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
             D++V++ L+ +Y KCG +  + ++F   P ++ V WN+MI GY Q G   +A+ +F  
Sbjct: 370 DQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHD 429

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKC 492
           M    VP  +VT+  VL AC+    ++ G+++   T+K  Y ++  + +   L+D+  + 
Sbjct: 430 MCSSGVPPDDVTFIGVLSACSYSGKVKEGLELF-ETMKCKYQVEPGIEHYACLVDLLGRA 488

Query: 493 GSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
             + +A +LV  M  + + + W A++     H
Sbjct: 489 DQVNEAMKLVEKMPMEPDAIVWGALLGACRTH 520



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 161/348 (46%), Gaps = 32/348 (9%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D+ A   ++  Y +  RL +A  LFDEMP+RN +++   + GY  + +   A  LF  + 
Sbjct: 178 DVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMP 237

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
               E N  ++TA L      G       +F  +          V   +I  F + G V+
Sbjct: 238 ----ERNEVSWTAMLLGYTHSGRMREASSLFDAMPV----KPVVVCNEMIMGFGLNGEVD 289

Query: 210 FARKVFDGLFN----------DCFE------EALNFFSQMRAVGFKPNNFTFAFVLKACL 253
            AR+VF G+              +E      EAL  F +M+  G   N  +   VL  C+
Sbjct: 290 KARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCV 349

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSF 313
            L ++   K  H   +++ ++ DLYVA  L+ +Y K G +  A+++F   P KDV+ W+ 
Sbjct: 350 SLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNS 409

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA----TMEGLDLGNQIHSLV 369
           MI  Y+Q  L  +A+ +F  M  + V P+  TF+ VL AC+      EGL+L     ++ 
Sbjct: 410 MITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLEL---FETMK 466

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMI 416
            +  +   +     L+D+  +  ++  +++L  + P + + + W  ++
Sbjct: 467 CKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALL 514



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 21/226 (9%)

Query: 422 LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC-ASLAALEPGMQVHCLTVKANYDMDVV 480
           +G  G+A++    ML+ ++  T  T SS   AC A    L+   +V   T   +    V 
Sbjct: 1   MGHSGRAILRRCMMLQVRLQCT--TSSSYAIACYARNGQLDHARKVFDETPLPHRT--VS 56

Query: 481 VANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG 540
             NA++  Y +     +A L+F+ M   N VSWN +ISG+  +G+ +E  +VFD M  R 
Sbjct: 57  SWNAMVAAYFEARQPREALLLFEKMPQRNTVSWNGLISGHIKNGMLSEARRVFDTMPDR- 115

Query: 541 WRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKA 600
              N +++  ++      G + + E  F  M         +  +T M+  L + G +D A
Sbjct: 116 ---NVVSWTSMVRGYVRNGDVAEAERLFWHMPHKN-----VVSWTVMLGGLLQEGRVDDA 167

Query: 601 AKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL-SAQHILDFEPE 645
            KL + +P +  V +   + G C      E GRL  A+ + D  P+
Sbjct: 168 RKLFDMMPEKDVVAVTNMIGGYC------EEGRLDEARALFDEMPK 207



 Score = 46.6 bits (109), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 27/111 (24%), Positives = 50/111 (45%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
            N  S  + L  C+    L     +H Q+++     DL+  +VL+ +YVK   L  A ++
Sbjct: 336 LNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQV 395

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFL 164
           F+  P ++ + + + I GY+      EA+ +F  +   G   +   F   L
Sbjct: 396 FNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVL 446


>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
          Length = 760

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 227/616 (36%), Positives = 327/616 (53%), Gaps = 81/616 (13%)

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
           F  AL+ FSQM   G  P+N      +KAC GL  ++ A+  HG A  + ++ D +V  +
Sbjct: 95  FHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSS 154

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+ +Y K  +I +A R+F+ M + DV+ WS ++A YA+     +A  LF  M  + V PN
Sbjct: 155 LVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPN 214

Query: 343 QF-----------------------------------TFVSVLQACATMEGLDLGNQIHS 367
                                                T  SVL A   +E L +G  IH 
Sbjct: 215 LISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHG 274

Query: 368 LVVRVGLLSDVFVSNALMDVYAKC-------------------------------GRMEN 396
            V++ GL+SD  VS+AL+D+Y KC                               G++E+
Sbjct: 275 YVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVES 334

Query: 397 SVELFAESPKR----NHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLR 452
           S+ LF +   +    N V+W +MI    Q G   +A+ +F +M    V    VT   +L 
Sbjct: 335 SLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLLP 394

Query: 453 ACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS 512
           AC ++AAL  G   HC +++     DV V +ALIDMYAKCG I  +R+ FD +   N V 
Sbjct: 395 ACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVC 454

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
           WNA+I+GY+MHG + E +++FDLMQ+ G +P+ ++F  VLSACS  GL E+G  YF SM 
Sbjct: 455 WNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMS 514

Query: 573 ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIG 632
           + YGIE  +EHY  MV+LL RAG L++A  +I  +P  P   +W ALL +C +HNNV +G
Sbjct: 515 SKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLG 574

Query: 633 RLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGM 681
            ++A+ + + EP +   ++LLSNIYA    W            K   K PG SWIE +  
Sbjct: 575 EVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNK 634

Query: 682 VHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKL 741
           VH   AGD SH  M  I   L+ L+M+ +K GY P+++ VL+DV E +KE+ L  HSEKL
Sbjct: 635 VHMLLAGDKSHPQMTQIIENLDKLSMEMKKLGYFPEINFVLQDVEEQDKEQILCGHSEKL 694

Query: 742 ALAFALFKMPPSSPIR 757
           A+ F L   PP  P++
Sbjct: 695 AVVFGLLNTPPGYPLQ 710



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 142/589 (24%), Positives = 241/589 (40%), Gaps = 124/589 (21%)

Query: 79  HCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQF 138
           H  +LK G   D      LL+ Y       DAT + D +PE N  SF T I  ++   QF
Sbjct: 36  HAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQF 95

Query: 139 VEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTAL 198
             A+  FS +   G   +     + +K    +   +    V       G DS++FV ++L
Sbjct: 96  HHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSL 155

Query: 199 IDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQM--------- 233
           +  +  C  +  A +VFD +F                  C +EA   FS+M         
Sbjct: 156 VHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNL 215

Query: 234 -----------------RAV---------GFKPNNFTFAFVLKACLGLDTIRVAKSAHGC 267
                             AV         GF+P+  T + VL A   L+ + +    HG 
Sbjct: 216 ISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGY 275

Query: 268 ALKTCYEMDLYVAVALLDLY-------------------------------TKSGEISNA 296
            +K     D  V+ AL+D+Y                               +++G++ ++
Sbjct: 276 VIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESS 335

Query: 297 RRIFEEMPKK----DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
            R+F ++  +    +V+ W+ MIA  +Q    ++A+ELF  M+ A V PN  T   +L A
Sbjct: 336 LRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLLPA 395

Query: 353 CATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTW 412
           C  +  L  G   H   +R G+ +DV+V +AL+D+YAKCGR++ S   F   P +N V W
Sbjct: 396 CGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCW 455

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
           N +I GY   G+  +AM +F  M         ++++ VL AC+     E G   +  ++ 
Sbjct: 456 NAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEG-SYYFNSMS 514

Query: 473 ANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISG---------- 519
           + Y ++  V +   ++ + ++ G +  A  ++  M  + +   W A++S           
Sbjct: 515 SKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLG 574

Query: 520 ------------------------YSMHGLSAEVLKVFDLMQQRGWRPN 544
                                   Y+  G+  EV +V D+M+ +G R N
Sbjct: 575 EVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKN 623



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 110/451 (24%), Positives = 191/451 (42%), Gaps = 74/451 (16%)

Query: 252 CLGLDTIRVAKS--AHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
           CL   T  ++++  AH   LKT    D ++A  LL  Y  +   ++A  + + +P+ +V 
Sbjct: 21  CLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVF 80

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
            +S +I  +++      A+  F +M    + P+     S ++ACA +  L    Q+H + 
Sbjct: 81  SFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIA 140

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELF-----------------------AESPK 406
              G  SD FV ++L+ +Y KC ++ ++  +F                        +  K
Sbjct: 141 SVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAK 200

Query: 407 R------------NHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
           R            N ++WN MI G+   G   +A++MF  M          T SSVL A 
Sbjct: 201 RLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAV 260

Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN-------- 506
             L  L  G+ +H   +K     D  V++ALIDMY KC   ++   VFD M+        
Sbjct: 261 GDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCN 320

Query: 507 ---------------------------DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
                                      + N VSW +MI+  S +G   E L++F  MQ  
Sbjct: 321 AFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIA 380

Query: 540 GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDK 599
           G +PN++T   +L AC N   L  G+A         GI   +   ++++ +  + G +  
Sbjct: 381 GVKPNSVTIPCLLPACGNIAALMHGKAA-HCFSLRRGISTDVYVGSALIDMYAKCGRIQA 439

Query: 600 AAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
           +    +GIP + +++ W A++    +H   +
Sbjct: 440 SRICFDGIPTK-NLVCWNAVIAGYAMHGKAK 469



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 111/465 (23%), Positives = 201/465 (43%), Gaps = 71/465 (15%)

Query: 50  SVSEFNSHSYATS--LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRL 107
           SVS F+S S+  S  +   I+ + ++ A  +  ++ +     D+ + + L+  Y +   +
Sbjct: 141 SVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEP----DVVSWSALVAAYARQGCV 196

Query: 108 PDATKLFDEMPER----NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAF 163
            +A +LF EM +     N IS+   I G+  S  + EAV +F  +H  G E +    ++ 
Sbjct: 197 DEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSV 256

Query: 164 LKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----- 218
           L  +  +    +   +   V K G  S+  V +ALID +  C C     +VFD +     
Sbjct: 257 LPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDV 316

Query: 219 -----------FNDCFEEALNFFSQ----------------------------------- 232
                       N   E +L  F Q                                   
Sbjct: 317 GSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFRE 376

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           M+  G KPN+ T   +L AC  +  +   K+AH  +L+     D+YV  AL+D+Y K G 
Sbjct: 377 MQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGR 436

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           I  +R  F+ +P K+++ W+ +IA YA    + +A+E+F  M+++   P+  +F  VL A
Sbjct: 437 IQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSA 496

Query: 353 CATMEGLDLGN-QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHV 410
           C+     + G+   +S+  + G+ + V     ++ + ++ G++E +  +    P   +  
Sbjct: 497 CSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDAC 556

Query: 411 TWNTMIVG-----YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
            W  ++        V LGEV  A  +F   LE   P   +  S++
Sbjct: 557 VWGALLSSCRVHNNVSLGEVA-AEKLFE--LEPSNPGNYILLSNI 598



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/265 (28%), Positives = 135/265 (50%), Gaps = 9/265 (3%)

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           Q T ++ L +  T   L    Q H+ +++ GL +D  ++  L+  YA      ++  +  
Sbjct: 15  QHTILNCLNS--TTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLD 72

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
             P+ N  +++T+I  + +  +   A+  FS+ML   +        S ++ACA L+AL+P
Sbjct: 73  LVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKP 132

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
             QVH +   + +D D  V ++L+ MY KC  I DA  VFD M + + VSW+A+++ Y+ 
Sbjct: 133 ARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYAR 192

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
            G   E  ++F  M   G +PN +++ G+++  ++ GL  +    F  M    G EP   
Sbjct: 193 QGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLR-GFEP--- 248

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGI 607
             T++ S+L   G L+    L+ GI
Sbjct: 249 DGTTISSVLPAVGDLE---DLVMGI 270


>gi|302753382|ref|XP_002960115.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
 gi|300171054|gb|EFJ37654.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
          Length = 653

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 224/628 (35%), Positives = 333/628 (53%), Gaps = 42/628 (6%)

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           N  ++EAL  + +M       + +T + VL AC  L  +   +     A +  +E D+ V
Sbjct: 26  NAMYQEALEVYKEMVREEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVV 85

Query: 280 AVALLDLYTKSGEISNARRIFEEMPK------------------------------KDVI 309
           A +L+ L+ K G +  A  +F  M                                KDV+
Sbjct: 86  ATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTAMIGAYCGSLKDSKSLFLTMDVKDVV 145

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
            W+ MIA Y       DA  LF RM      P+ +TF S+L ACA+ + L+ G  +H  +
Sbjct: 146 SWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRI 205

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAM 429
              G   D  + N L+ +Y +CG +E++   F    K+    WNTM+  Y Q  +   A+
Sbjct: 206 TARGFDRDFAMQNNLISMYTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDAL 265

Query: 430 IMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMY 489
            ++  ML E       T+SSV+ +CASL AL  G  +H  +    ++ DV++  AL++MY
Sbjct: 266 FLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMY 325

Query: 490 AKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFV 549
           AKCGS+ DA+  FD +++ + VSW+AMI+  + HG + E L++  LM  +G   N +T  
Sbjct: 326 AKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTAS 385

Query: 550 GVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF 609
            VL ACS+GG L +G  YF  +  ++GIE   E+    + LLGRAG L +A  ++  +PF
Sbjct: 386 SVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPF 445

Query: 610 QPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE----- 664
           + S +    LLG C +H +V  G+   + I+  EPE+  ++VLL+N+YA A  W+     
Sbjct: 446 KVSFVALVTLLGGCKVHGDVRRGKAFTKRIVALEPENPGSYVLLNNMYAAAGRWDDVAKL 505

Query: 665 ------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSR-KAGYIPD 717
                 K   ++ G S IE +  ++ F  GDTS+     IR  LE L  + + + GY+PD
Sbjct: 506 RRYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNPRNLEIRAELERLYSRMKEEEGYVPD 565

Query: 718 LSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISK 777
              V  DV +D+KE  L  HSEK+A+ F L   PP S +RIIKNLR+C DCHT  K+ SK
Sbjct: 566 TRDVFHDVSDDKKEELLKFHSEKMAMGFGLITSPPGSTLRIIKNLRVCSDCHTVGKLASK 625

Query: 778 IVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           I  R II+RD  RFHHF+ G CSCGD+W
Sbjct: 626 ITGRRIIVRDGTRFHHFEGGICSCGDYW 653



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 132/546 (24%), Positives = 232/546 (42%), Gaps = 93/546 (17%)

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A ++FD + +RN  S+   ++ Y  ++ + EA+ ++  + RE   ++ +  ++ L     
Sbjct: 1   ARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVREEISIDAYTLSSVLAACTK 60

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--GLFNDCF---- 223
           +   E    V     +LG + +  V T+LI  F+ CGC+E A  VF   G   D      
Sbjct: 61  LLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTA 120

Query: 224 ----------------------------------------EEALNFFSQMRAVGFKPNNF 243
                                                   ++A + F +M  +G  P+ +
Sbjct: 121 MIGAYCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIY 180

Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
           TF+ +L AC     +   +  H       ++ D  +   L+ +YT+ G + +ARR F  +
Sbjct: 181 TFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRYFYSI 240

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
            KK++  W+ M+A YAQ D   DA+ L+  M      P++FTF SV+ +CA++  L  G 
Sbjct: 241 EKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGK 300

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
            IH      G   DV +  AL+++YAKCG + ++ + F     ++ V+W+ MI    Q G
Sbjct: 301 FIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHG 360

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN 483
              +A+ +   M  + +   EVT SSVL AC+    L  G+  + + +  ++ ++    N
Sbjct: 361 HAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGID-YFMGLSQDFGIERDEEN 419

Query: 484 --ALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW 541
               ID+  + G + +A  V   M                                    
Sbjct: 420 TVGFIDLLGRAGWLKEAEHVLHTM------------------------------------ 443

Query: 542 RPNNLTFVG---VLSACSNGGLLEQGEAYFKSMVANYGIEP-CIEHYTSMVSLLGRAGHL 597
            P  ++FV    +L  C   G + +G+A+ K +VA   +EP     Y  + ++   AG  
Sbjct: 444 -PFKVSFVALVTLLGGCKVHGDVRRGKAFTKRIVA---LEPENPGSYVLLNNMYAAAGRW 499

Query: 598 DKAAKL 603
           D  AKL
Sbjct: 500 DDVAKL 505



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 112/273 (41%), Gaps = 29/273 (10%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
           +++++ L +C     L+    +H ++  +G   D    N L+++Y +   L  A + F  
Sbjct: 180 YTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRYFYS 239

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
           + ++   ++ T +  Y    +  +A+ L+  +  EG   + F F++ +    S+G     
Sbjct: 240 IEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREG 299

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF------------- 223
             +  C    G + +  +GTAL++ ++ CG +  A+K FDG+ N                
Sbjct: 300 KFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQH 359

Query: 224 ---EEALNFFSQMRAVGFKPNNFTFAFVLKACL-------GLDTIRVAKSAHGCALKTCY 273
              EEAL     M   G   N  T + VL AC        G+D         G +     
Sbjct: 360 GHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYF------MGLSQDFGI 413

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKK 306
           E D    V  +DL  ++G +  A  +   MP K
Sbjct: 414 ERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFK 446



 Score = 46.2 bits (108), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 58/125 (46%), Gaps = 1/125 (0%)

Query: 498 ARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSN 557
           AR VFD +   N  SW+ ++  Y  + +  E L+V+  M +     +  T   VL+AC+ 
Sbjct: 1   ARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVREEISIDAYTLSSVLAACTK 60

Query: 558 GGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWR 617
              +E+G    +      G E  +   TS++ L  + G L++A  +   +     ++   
Sbjct: 61  LLDVEEGR-MVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVT 119

Query: 618 ALLGA 622
           A++GA
Sbjct: 120 AMIGA 124


>gi|255577487|ref|XP_002529622.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223530907|gb|EEF32767.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 752

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 225/668 (33%), Positives = 362/668 (54%), Gaps = 29/668 (4%)

Query: 67  IQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFV 126
           I + D      +H  ++K G+  D F  N +LN+YVK NRL  A K+FD M  RNTI++ 
Sbjct: 78  IGSRDFLLGQAVHSYLVKAGSQDDTFKGNNVLNLYVKFNRLDLAQKVFDRMRTRNTITWT 137

Query: 127 TTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKL 186
           + I+GY   + F  A  +   +H+ G   N    T  L+   S     L   +   V K 
Sbjct: 138 SLIKGYLEDNDFQSAFSIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQIHCFVIKS 197

Query: 187 GHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-FND--CFE-------------EALNFF 230
           G D N FVGT+LI  ++  G  + A KVFD + F D  C               +A+  F
Sbjct: 198 GFDENVFVGTSLIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGNGGKAIEVF 257

Query: 231 SQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKS 290
             +   GF+P ++TF  ++  C G   +   K   G A K  +  +  V  A++ +Y  S
Sbjct: 258 KNLLNDGFEPTDYTFTNIISTCNGDLGVEEGKQLQGLAFKYGFLSETSVGNAIITMYGNS 317

Query: 291 GEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF-VAPNQFTFVSV 349
           G    A R+F  M +K++I W+ +I+ Y+++     AV+ F  +     +  +     ++
Sbjct: 318 GMPKEAERMFSSMSEKNLISWTALISGYSRSGYGKKAVDAFLGLHDELGINFDSTLLTAI 377

Query: 350 LQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNH 409
           L  C+    L+LG QIH  V+++G   DV V+ AL+D+YAKC +++++  +F     +  
Sbjct: 378 LDCCSDCNNLELGLQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSARIVFDHLSNKGI 437

Query: 410 VTWNTMIVGYVQL-GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHC 468
            ++N ++ G+++  G+    MI+F+++    V    VT+S +L   A+ A+LE G   H 
Sbjct: 438 ASFNAILAGFLESSGDEEDPMILFNQLRLAGVKPDMVTFSRLLSLLANQASLEKGRSFHA 497

Query: 469 LTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAE 528
            TVK  +D ++ VAN++I MYAKCGSI DA  +F++MN  + +SWNA+IS Y++HG + +
Sbjct: 498 YTVKTGFDTNISVANSVISMYAKCGSIEDAHQMFNIMNCRDSISWNALISAYALHGQAQK 557

Query: 529 VLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMV 588
            L +F+ M+++G+ P+  T + +L AC+  GL + G   F  M   YGI+P +EHY  M 
Sbjct: 558 SLFLFEEMKRKGFDPDEFTILAILQACTYSGLWKDGICLFNLMEPKYGIKPLLEHYACMA 617

Query: 589 SLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEA 648
            LLGRAG+L +A  +I+  PF  S ++WR L+  C +H N+  G+L+++H+LD  P +  
Sbjct: 618 DLLGRAGYLSEAMDIIKRSPFPKSTLLWRTLVNVCKLHGNLNFGKLASKHLLDLSPVEAG 677

Query: 649 THVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNI 697
           +++L+SN+YA  +  ++AA            KE G SWIE    VH+F A D  H +   
Sbjct: 678 SYILVSNMYASEKMSDEAAKVRKVMNDLKFRKEAGSSWIEIDNKVHHFVASDKDHPESRE 737

Query: 698 IRGMLEWL 705
           I   LE L
Sbjct: 738 IYTRLELL 745



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 110/465 (23%), Positives = 212/465 (45%), Gaps = 21/465 (4%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
           FN H+    LQ+C   DD      IHC V+K G   ++F    L+ +Y K      A K+
Sbjct: 166 FNEHTCTVILQACSSPDDRILGEQIHCFVIKSGFDENVFVGTSLIAMYTKSGFFDVAEKV 225

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           FD M  ++       I  Y  +    +A+ +F  L  +G E   + FT  +         
Sbjct: 226 FDSMGFKDIRCLNFMILEYGRAGNGGKAIEVFKNLLNDGFEPTDYTFTNIISTCNGDLGV 285

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF---------- 223
           E    +    +K G  S   VG A+I  +   G  + A ++F  +               
Sbjct: 286 EEGKQLQGLAFKYGFLSETSVGNAIITMYGNSGMPKEAERMFSSMSEKNLISWTALISGY 345

Query: 224 ------EEALN-FFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
                 ++A++ F      +G   ++     +L  C   + + +    HG  +K     D
Sbjct: 346 SRSGYGKKAVDAFLGLHDELGINFDSTLLTAILDCCSDCNNLELGLQIHGFVMKLGCACD 405

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLS-IDAVELFCRMR 335
           + VA AL+DLY K  ++ +AR +F+ +  K +  ++ ++A + ++     D + LF ++R
Sbjct: 406 VNVATALVDLYAKCEKLQSARIVFDHLSNKGIASFNAILAGFLESSGDEEDPMILFNQLR 465

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
            A V P+  TF  +L   A    L+ G   H+  V+ G  +++ V+N+++ +YAKCG +E
Sbjct: 466 LAGVKPDMVTFSRLLSLLANQASLEKGRSFHAYTVKTGFDTNISVANSVISMYAKCGSIE 525

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
           ++ ++F     R+ ++WN +I  Y   G+  K++ +F +M  +     E T  ++L+AC 
Sbjct: 526 DAHQMFNIMNCRDSISWNALISAYALHGQAQKSLFLFEEMKRKGFDPDEFTILAILQACT 585

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA 498
                + G+ +  L ++  Y +  ++ +   + D+  + G +++A
Sbjct: 586 YSGLWKDGICLFNL-MEPKYGIKPLLEHYACMADLLGRAGYLSEA 629



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 157/318 (49%), Gaps = 1/318 (0%)

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
           ++K  +G     + ++ H   +K   + D +    +L+LY K   +  A+++F+ M  ++
Sbjct: 73  LIKISIGSRDFLLGQAVHSYLVKAGSQDDTFKGNNVLNLYVKFNRLDLAQKVFDRMRTRN 132

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
            I W+ +I  Y + +    A  +   M +     N+ T   +LQAC++ +   LG QIH 
Sbjct: 133 TITWTSLIKGYLEDNDFQSAFSIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQIHC 192

Query: 368 LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK 427
            V++ G   +VFV  +L+ +Y K G  + + ++F     ++    N MI+ Y + G  GK
Sbjct: 193 FVIKSGFDENVFVGTSLIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGNGGK 252

Query: 428 AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALID 487
           A+ +F  +L +    T+ T+++++  C     +E G Q+  L  K  +  +  V NA+I 
Sbjct: 253 AIEVFKNLLNDGFEPTDYTFTNIISTCNGDLGVEEGKQLQGLAFKYGFLSETSVGNAIIT 312

Query: 488 MYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVF-DLMQQRGWRPNNL 546
           MY   G   +A  +F  M++ N +SW A+ISGYS  G   + +  F  L  + G   ++ 
Sbjct: 313 MYGNSGMPKEAERMFSSMSEKNLISWTALISGYSRSGYGKKAVDAFLGLHDELGINFDST 372

Query: 547 TFVGVLSACSNGGLLEQG 564
               +L  CS+   LE G
Sbjct: 373 LLTAILDCCSDCNNLELG 390



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/387 (24%), Positives = 178/387 (45%), Gaps = 26/387 (6%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E   +++   + +C  +  ++    +     K G   +    N ++ +Y       +A +
Sbjct: 266 EPTDYTFTNIISTCNGDLGVEEGKQLQGLAFKYGFLSETSVGNAIITMYGNSGMPKEAER 325

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHRE-GHELNPFAFTAFLKVLVSMG 171
           +F  M E+N IS+   I GY+ S    +AV  F  LH E G   +    TA L       
Sbjct: 326 MFSSMSEKNLISWTALISGYSRSGYGKKAVDAFLGLHDELGINFDSTLLTAILDCCSDCN 385

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF-------- 223
             EL   +   V KLG   +  V TAL+D ++ C  ++ AR VFD L N           
Sbjct: 386 NLELGLQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSARIVFDHLSNKGIASFNAILA 445

Query: 224 ---------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
                    E+ +  F+Q+R  G KP+  TF+ +L       ++   +S H   +KT ++
Sbjct: 446 GFLESSGDEEDPMILFNQLRLAGVKPDMVTFSRLLSLLANQASLEKGRSFHAYTVKTGFD 505

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
            ++ VA +++ +Y K G I +A ++F  M  +D I W+ +I+ YA    +  ++ LF  M
Sbjct: 506 TNISVANSVISMYAKCGSIEDAHQMFNIMNCRDSISWNALISAYALHGQAQKSLFLFEEM 565

Query: 335 RQAFVAPNQFTFVSVLQACAT----MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAK 390
           ++    P++FT +++LQAC       +G+ L N +     + G+   +     + D+  +
Sbjct: 566 KRKGFDPDEFTILAILQACTYSGLWKDGICLFNLMEP---KYGIKPLLEHYACMADLLGR 622

Query: 391 CGRMENSVELFAESP-KRNHVTWNTMI 416
            G +  ++++   SP  ++ + W T++
Sbjct: 623 AGYLSEAMDIIKRSPFPKSTLLWRTLV 649


>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Cucumis sativus]
          Length = 610

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 210/560 (37%), Positives = 323/560 (57%), Gaps = 14/560 (2%)

Query: 257 TIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIA 316
           +I   +  H    K+    D ++   L+  Y K G   +A ++F++MP KD++ W+ +I+
Sbjct: 54  SISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLIS 113

Query: 317 RYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLS 376
            +++  L +     +    +  V PN+ T +S++ AC     LD G  IH   ++VG   
Sbjct: 114 GFSRC-LHMSLTAFYTMKFEMSVKPNEVTILSMISACNG--ALDAGKYIHGFGIKVGGTL 170

Query: 377 DVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML 436
           +V V+N+L+++Y K G + ++  LF   P  N V+WN++I   V  G   + +  F+KM 
Sbjct: 171 EVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMR 230

Query: 437 EEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSIT 496
              +   E T  ++L+AC  L   +    +H L     +   + +A AL+D YAK G ++
Sbjct: 231 RLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLS 290

Query: 497 DARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS 556
            +  VF  +   + V+W AM++GY+ HGL  E +K+F+ M  +G  P+++TF  +LSACS
Sbjct: 291 ASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACS 350

Query: 557 NGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIW 616
           + GL+ +G++YF  M   YGIEP ++HY+ MV LLGR G L+ A ++I+ +P +P+  +W
Sbjct: 351 HSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVW 410

Query: 617 RALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA--------- 667
            ALLGAC +H N+E+G+  A+H+++ EP D   +++LSN+Y+ +RSW+ AA         
Sbjct: 411 GALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKER 470

Query: 668 --SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDV 725
              + PG S IE     H+F  GD SH +   I   LE L  K RKAGY      VL+DV
Sbjct: 471 GLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKAGYSSKTEYVLQDV 530

Query: 726 REDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIII 785
            E+ KE  +  HSEKLA+AF L        + I KNLRIC DCH+  K+IS I +R III
Sbjct: 531 EEEVKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHSTAKLISLIEKRTIII 590

Query: 786 RDVHRFHHFQDGCCSCGDFW 805
           RD  RFHHF DG CSC D+W
Sbjct: 591 RDPKRFHHFSDGFCSCADYW 610



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 192/404 (47%), Gaps = 34/404 (8%)

Query: 148 LHREGHEL----NPFAFTAFLKVLVSMGWAELCPCVFAC------VYKLGHDSNAFVGTA 197
           LHR  H +     P A  + L + V+      CP +  C      V+K     + F+G  
Sbjct: 25  LHRSFHLVRQCATPEAIVSALLIAVNS-----CPSISNCREIHARVFKSLLYRDGFIGDQ 79

Query: 198 LIDAFSVCGCVEFARKVFDGL--------------FNDCFEEALNFFSQMR-AVGFKPNN 242
           L+  ++  G  E A K+FD +              F+ C   +L  F  M+  +  KPN 
Sbjct: 80  LVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSRCLHMSLTAFYTMKFEMSVKPNE 139

Query: 243 FTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEE 302
            T   ++ AC G   +   K  HG  +K    +++ VA +L+++Y KSG++++A R+FE 
Sbjct: 140 VTILSMISACNG--ALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEA 197

Query: 303 MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG 362
           +P  + + W+ +IA       + + ++ F +MR+  +  ++ T +++LQAC  +    L 
Sbjct: 198 IPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLA 257

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
             IH L+   G  + + ++ AL+D YAK GR+  S  +F E    + V W  M+ GY   
Sbjct: 258 ESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAH 317

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ-VHCLTVKANYDMDVVV 481
           G   +A+ +F  M  + +    VT++ +L AC+    +  G    + ++     +  V  
Sbjct: 318 GLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDH 377

Query: 482 ANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHG 524
            + ++D+  +CG + DA  ++ +M  + N   W A++    +HG
Sbjct: 378 YSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHG 421



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 177/377 (46%), Gaps = 27/377 (7%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           IH +V K     D F  + L+  Y KL    DA KLFD+MP ++ +S+ + I G++    
Sbjct: 61  IHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSRCLH 120

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
              ++  F T+  E   + P   T    +    G  +    +     K+G      V  +
Sbjct: 121 M--SLTAFYTMKFE-MSVKPNEVTILSMISACNGALDAGKYIHGFGIKVGGTLEVKVANS 177

Query: 198 LIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPN 241
           LI+ +   G +  A ++F+ +                 N C  E +++F++MR +G + +
Sbjct: 178 LINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQD 237

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
             T   +L+ACL L   ++A+S HG    T +   + +A ALLD Y K G +S +  +F 
Sbjct: 238 EGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFT 297

Query: 302 EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL 361
           E+   D + W+ M+A YA   L  +A++LF  M    + P+  TF  +L AC+    ++ 
Sbjct: 298 EVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNE 357

Query: 362 GNQIHSLVVRV-GLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTM---- 415
           G    +++  V G+   V   + ++D+  +CG + ++ E+    P + N   W  +    
Sbjct: 358 GKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGAC 417

Query: 416 -IVGYVQLG-EVGKAMI 430
            + G ++LG EV + +I
Sbjct: 418 RVHGNIELGKEVAEHLI 434



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 110/254 (43%), Gaps = 19/254 (7%)

Query: 69  NDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTT 128
           N  L     IH   +K G  L++   N L+N+Y K   L  A +LF+ +P+ NT+S+ + 
Sbjct: 150 NGALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSI 209

Query: 129 IQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGH 188
           I     +    E +  F+ + R G E +     A L+  + +G  +L   +   ++  G 
Sbjct: 210 IAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGF 269

Query: 189 DSNAFVGTALIDAFSVCGCVEFARKVFDGL-FND---------------CFEEALNFFSQ 232
            +   + TAL+D ++  G +  +  VF  + F D                  EA+  F  
Sbjct: 270 GAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFES 329

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA--VALLDLYTKS 290
           M   G +P++ TF  +L AC     +   KS     +   Y ++  V     ++DL  + 
Sbjct: 330 MANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFN-VMSEVYGIEPRVDHYSCMVDLLGRC 388

Query: 291 GEISNARRIFEEMP 304
           G +++A  + + MP
Sbjct: 389 GLLNDAYEVIQNMP 402



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 104/215 (48%), Gaps = 7/215 (3%)

Query: 410 VTWNTMIVG--YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVH 467
           + WN+ I+   ++Q       ++  S  L  Q    E   S++L A  S  ++    ++H
Sbjct: 3   LRWNSSILYNFFIQSRTQYPLLLHRSFHLVRQCATPEAIVSALLIAVNSCPSISNCREIH 62

Query: 468 CLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSA 527
               K+    D  + + L+  Y K G   DA  +FD M   + VSWN++ISG+S   L  
Sbjct: 63  ARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFS-RCLHM 121

Query: 528 EVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSM 587
            +   + +  +   +PN +T + ++SAC+  G L+ G+ Y        G    ++   S+
Sbjct: 122 SLTAFYTMKFEMSVKPNEVTILSMISACN--GALDAGK-YIHGFGIKVGGTLEVKVANSL 178

Query: 588 VSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           +++ G++G L  A +L E IP  P+ + W +++ A
Sbjct: 179 INMYGKSGDLTSACRLFEAIP-DPNTVSWNSIIAA 212


>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
          Length = 853

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 226/693 (32%), Positives = 367/693 (52%), Gaps = 35/693 (5%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           ++H+    ++SC     +     +H      G   D++  + L+ +Y     L +A   F
Sbjct: 140 DAHTLPYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAF 199

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS----M 170
           D +PER+ + +   + G   +     AV LF  +   G E N      FL V  +    +
Sbjct: 200 DGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLL 259

Query: 171 GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-----------GLF 219
             A+L      C    G +    V   L+  ++ C C++ A ++F+           G+ 
Sbjct: 260 SGAQLHSLAVKC----GLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMI 315

Query: 220 NDC-----FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
           + C     F EA   F  M+  G +P++ T   +L A   L+ ++  K  HG  ++ C  
Sbjct: 316 SGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVN 375

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
           MD+++  AL+D+Y K  ++  A+ +++     DV+  S MI+ Y    +S +A+++F  +
Sbjct: 376 MDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYL 435

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
            +  + PN  T  SVL  CA+M  L LG QIH  V+R       +V +ALMD+YAKCGR+
Sbjct: 436 LEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRL 495

Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
           + S  +F +  +++ VTWN+MI  + Q G+  +A+ +F +M  E +    +T S+ L AC
Sbjct: 496 DLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSAC 555

Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
           ASL A+  G ++H +T+K     D+   +ALIDMYAKCG++  A  VF+ M D NEVSWN
Sbjct: 556 ASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWN 615

Query: 515 AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
           ++IS Y  HGL  E + +   MQ+ G++P+++TF+ ++SAC++ GL+E+G   F+ M   
Sbjct: 616 SIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKK 675

Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL 634
           Y I P +EH+  MV L  R+G LDKA + I  +PF+P   IW ALL AC +H NVE+  +
Sbjct: 676 YLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADI 735

Query: 635 SAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVH 683
           ++Q +   +P +   +VL+SNI A+A  W+  +            K PG SW++     H
Sbjct: 736 ASQELFKLDPANSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSH 795

Query: 684 YFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIP 716
            F A D SH +   I   L+ L  + R+ GY+P
Sbjct: 796 LFVASDKSHPESEDIYTSLKTLLQELREEGYVP 828



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 137/489 (28%), Positives = 239/489 (48%), Gaps = 18/489 (3%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N  + A  L  C  + DL +   +H   +K G   ++   N LL +Y K   L DA +
Sbjct: 239 EPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWR 298

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           LF+ MP+ + +++   I G   +  FVEA GLF  + R G   +     + L  L  +  
Sbjct: 299 LFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNG 358

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG--------------- 217
            +    V   + +   + + F+ +AL+D +  C  V  A+ ++D                
Sbjct: 359 LKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISG 418

Query: 218 -LFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
            + N   EEAL  F  +     KPN  T A VL  C  +  + + +  HG  L+  YE  
Sbjct: 419 YVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERK 478

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
            YV  AL+D+Y K G +  +  IF +M +KD + W+ MI+ ++Q     +A++LF +M  
Sbjct: 479 CYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCM 538

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
             +  N  T  + L ACA++  +  G +IH + ++  + +D+F  +AL+D+YAKCG +E 
Sbjct: 539 EGIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLEL 598

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           ++ +F   P +N V+WN++I  Y   G V +++ +   M EE      VT+ +++ ACA 
Sbjct: 599 ALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAH 658

Query: 457 LAALEPGMQV-HCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWN 514
              +E G+Q+  C+T K      +     ++D+Y++ G +  A + + DM    +   W 
Sbjct: 659 AGLVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWG 718

Query: 515 AMISGYSMH 523
           A++    +H
Sbjct: 719 ALLHACRVH 727



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 186/359 (51%), Gaps = 1/359 (0%)

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           P+  T  +V+K+C  L  + + +  H  A       D+YV  AL+ +Y  +G + NAR  
Sbjct: 139 PDAHTLPYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDA 198

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL 359
           F+ +P++D + W+ M+    +      AV LF  MR +   PN  T    L  CAT   L
Sbjct: 199 FDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADL 258

Query: 360 DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGY 419
             G Q+HSL V+ GL  +V V+N L+ +YAKC  ++++  LF   P+ + VTWN MI G 
Sbjct: 259 LSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGC 318

Query: 420 VQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDV 479
           VQ G   +A  +F  M         +T  S+L A   L  L+ G +VH   V+   +MDV
Sbjct: 319 VQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDV 378

Query: 480 VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
            + +AL+D+Y KC  +  A+ ++D     + V  + MISGY ++G+S E L++F  + ++
Sbjct: 379 FLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQ 438

Query: 540 GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLD 598
             +PN +T   VL  C++   L  G+     ++ N     C    ++++ +  + G LD
Sbjct: 439 CIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVE-SALMDMYAKCGRLD 496



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/352 (30%), Positives = 178/352 (50%), Gaps = 13/352 (3%)

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMD---LYVAVALLDLYTKSGEISNARRIFEEMP 304
           VL+ C+    + +    H  A+ +    D   L +   LL +Y  +    +A  +F  +P
Sbjct: 38  VLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFSALP 97

Query: 305 KKDV---IPWSFMIARYAQTDLSIDAVELFCRM--RQAFVAPNQFTFVSVLQACATMEGL 359
           +      +PW+++I  +        AV  + +M    A  +P+  T   V+++CA +  +
Sbjct: 98  RAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAALGAM 157

Query: 360 DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGY 419
            LG  +H     +GL +DV+V +AL+ +YA  G + N+ + F   P+R+ V WN M+ G 
Sbjct: 158 SLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDGC 217

Query: 420 VQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDV 479
           ++ G+V  A+ +F  M          T +  L  CA+ A L  G Q+H L VK   + +V
Sbjct: 218 IKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEV 277

Query: 480 VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
            VAN L+ MYAKC  + DA  +F++M   + V+WN MISG   +GL  E   +F  MQ+ 
Sbjct: 278 AVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRS 337

Query: 540 GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLL 591
           G RP+++T V +L A ++   L+QG+      V  Y +  C+     +VS L
Sbjct: 338 GARPDSITLVSLLPALTDLNGLKQGKE-----VHGYIVRNCVNMDVFLVSAL 384



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 140/287 (48%), Gaps = 10/287 (3%)

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSD---VFVSNALMDVYAKCGRMENSVELFA 402
            ++VL+ C +   L LG QIH+  V  G LSD   + +   L+ +Y    R  ++V +F+
Sbjct: 35  LLAVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFS 94

Query: 403 ESPK---RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ-VPATEV-TYSSVLRACASL 457
             P+    + + WN +I G+   G+   A++ + KM      P+ +  T   V+++CA+L
Sbjct: 95  ALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAAL 154

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
            A+  G  VH          DV V +AL+ MYA  G + +AR  FD + + + V WN M+
Sbjct: 155 GAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMM 214

Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
            G    G     +++F  M+  G  PN  T    LS C+    L  G A   S+    G+
Sbjct: 215 DGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSG-AQLHSLAVKCGL 273

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACI 624
           EP +    +++++  +   LD A +L E +P Q  ++ W  ++  C+
Sbjct: 274 EPEVAVANTLLAMYAKCQCLDDAWRLFELMP-QDDLVTWNGMISGCV 319


>gi|115486035|ref|NP_001068161.1| Os11g0583200 [Oryza sativa Japonica Group]
 gi|113645383|dbj|BAF28524.1| Os11g0583200 [Oryza sativa Japonica Group]
          Length = 703

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 221/565 (39%), Positives = 321/565 (56%), Gaps = 14/565 (2%)

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDT-IRVAKSAHGCALKTCY-EMDLYVAVAL 283
           AL+ F+ M  +G +PN+FTF    KA         +    H  A++  Y  +D +V+ A 
Sbjct: 101 ALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAA 160

Query: 284 LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
           LD+Y K+G +  AR +F EMP ++V+ W+ ++         ++ +E +  +R+A   PN 
Sbjct: 161 LDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNV 220

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
            +  +   ACA    L LG Q H  VV+ G   DV V N+++D Y KC     +  +F  
Sbjct: 221 VSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDG 280

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
              RN V+W +M+  Y Q G   +A   +          T+   SS L  CA L  L  G
Sbjct: 281 MGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLG 340

Query: 464 MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMH 523
             +H + V++  D ++ VA+AL+DMY KCG + DA  +F      N V+WNAMI GY+  
Sbjct: 341 RALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHI 400

Query: 524 GLSAEVLKVFDLMQQRG-WRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
           G +   L VFD M + G   PN +T V V+++CS GGL + G   F++M   +GIEP  E
Sbjct: 401 GDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTE 460

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDF 642
           HY  +V LLGRAG  ++A ++I+G+P +PS+ +W ALLGAC +H   E+GR++A+ + + 
Sbjct: 461 HYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFEL 520

Query: 643 EPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTS 691
           +P+D   HVLLSN++A A  W +A             K+PG SW+  + +VH FRA DT 
Sbjct: 521 DPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTK 580

Query: 692 HADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMP 751
           H   N I+ +L  L  + + AGY+PD    L D+ E+EKE  ++ HSEKLALAF L  +P
Sbjct: 581 HEMYNEIQALLSKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLICIP 640

Query: 752 PSSPIRIIKNLRICVDCHTAIKIIS 776
           P  PIRI+KNLRICVDCH A K IS
Sbjct: 641 PGVPIRIMKNLRICVDCHRAFKFIS 665



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/508 (25%), Positives = 233/508 (45%), Gaps = 32/508 (6%)

Query: 60  ATSLQSCIQNDDLQTAMTIHCQVLKK-GNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           A + +S I +   +     H + L+     L  F    L+N+Y KL+    A       P
Sbjct: 19  AAAFESAIASRSPRLGRAAHARALRLIAPALSPFICAHLVNLYSKLDLPAAAAAALASDP 78

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG-WAELCP 177
               +S+   I G     + + A+  F+ + R G   N F F +  K   S    + + P
Sbjct: 79  HPTVVSYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGP 138

Query: 178 CVFACVYKLGH-DSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFE------------ 224
            + +   + G+   + FV  A +D +   G ++ AR +F  + N                
Sbjct: 139 QIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLD 198

Query: 225 ----EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
               E +  +  +R  G  PN  +      AC G   + + +  HG  +K  +EMD+ V 
Sbjct: 199 GRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVL 258

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
            +++D Y K      AR +F+ M  ++ + W  M+A YAQ     +A   +   R++   
Sbjct: 259 NSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEE 318

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           P  F   S L  CA + GL LG  +H++ VR  + +++FV++AL+D+Y KCG +E++ ++
Sbjct: 319 PTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQI 378

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE-QVPATEVTYSSVLRACASLAA 459
           F E+P+RN VTWN MI GY  +G+   A+++F  M+   +     +T  +V+ +C+    
Sbjct: 379 FYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGL 438

Query: 460 LEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDARLVFDMMNDWNEVS-WNAM 516
            + G ++   T++  + ++    +   ++D+  + G    A  V   M     +S W A+
Sbjct: 439 TKDGYELF-ETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGAL 497

Query: 517 ISGYSMHG------LSAEVLKVFDLMQQ 538
           +    MHG      ++AE  K+F+L  Q
Sbjct: 498 LGACKMHGKTELGRIAAE--KLFELDPQ 523



 Score = 41.6 bits (96), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 4/117 (3%)

Query: 511 VSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKS 570
           VS+ A ISG + HG     L  F  M + G RPN+ TF     A ++            S
Sbjct: 83  VSYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHS 142

Query: 571 MVANYGIEPCIEHYTSMVSL--LGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACII 625
           +   +G  P ++ + S  +L    + G L  A  L   +P + +V+ W A++   ++
Sbjct: 143 LAIRFGYLP-VDPFVSCAALDMYFKTGRLKLARHLFGEMPNR-NVVAWNAVMTNAVL 197


>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
          Length = 673

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 233/659 (35%), Positives = 355/659 (53%), Gaps = 75/659 (11%)

Query: 181 ACVYKLGHDSNAFVGTALIDAF------------SVCGCVEFARK----VFDGLFNDCFE 224
           A + + GH  ++++  +L+ ++            S     +F RK    +++ +   C E
Sbjct: 56  ALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIE 115

Query: 225 -----EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
                +A+  + +M     +PN +T+  VLKAC     +      H   +K     D ++
Sbjct: 116 NNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGGDGHI 175

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKK-DVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
             + + +Y   G +  ARRI ++   + D + W+ MI  Y +      A ELF  M    
Sbjct: 176 LSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGM---- 231

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
             P++                                S +   NA++  +++CG +E + 
Sbjct: 232 --PDR--------------------------------SMISTWNAMISGFSRCGMVEVAR 257

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
           E F E  +R+ ++W+ MI GY+Q G   +A+ +F +M +E++   +    SVL ACA+L 
Sbjct: 258 EFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLG 317

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           AL+ G  +H    + +  +D V+  +L+DMYAKCG I  A  VF+ M++    SWNAMI 
Sbjct: 318 ALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIG 377

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           G +MHG + + + +F  M      PN +TFVGVL+AC++GGL+++G   F SM   YG+E
Sbjct: 378 GLAMHGRAEDAIDLFSKMD---IYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVE 434

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P IEHY  +V LLGRAG L +A K++  IP +P+  +W ALLGAC  H NVE+G    + 
Sbjct: 435 PQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKI 494

Query: 639 ILDFEPEDEATHVLLSNIYAMARSWEKAAS-----KE------PGLSWIE-NQGMVHYFR 686
           +L+ EP++   + LLSNIYA A  WE+        KE      PG S I+  +G VH F 
Sbjct: 495 LLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFI 554

Query: 687 AGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFA 746
            GD SH  +  I  ML+ +  + +  GY PD S VL D+ E+EKE  +W HSEKLA+ F 
Sbjct: 555 IGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFG 614

Query: 747 LFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           L    P + IRI+KNLR+C DCH+A K+IS++  REII+RD  R+HHF++G CSC DFW
Sbjct: 615 LINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 673



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 101/408 (24%), Positives = 170/408 (41%), Gaps = 74/408 (18%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           S  N ++Y   L++C  +  +   + +H  ++K G   D    +  + +Y    RL +A 
Sbjct: 134 SRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEAR 193

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
           ++ D+                                  +G E++   + A +   +  G
Sbjct: 194 RILDD----------------------------------KGGEVDAVCWNAMIDGYLRFG 219

Query: 172 WAELCPCVFACVYKLGHDSNAFVGT--ALIDAFSVCGCVEFARKVFD------------- 216
             E    +F      G    + + T  A+I  FS CG VE AR+ FD             
Sbjct: 220 EVEAARELFE-----GMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAM 274

Query: 217 --GLFND-CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY 273
             G   + CF EAL  F QM+    +P  F    VL AC  L  +   +  H  A +   
Sbjct: 275 IDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSI 334

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
           ++D  +  +L+D+Y K G I  A  +FE+M  K+V  W+ MI   A    + DA++LF +
Sbjct: 335 QLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSK 394

Query: 334 MRQAFVAPNQFTFVSVLQACA----TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYA 389
           M    + PN+ TFV VL ACA      +GL + N   S+    G+   +     ++D+  
Sbjct: 395 MD---IYPNEITFVGVLNACAHGGLVQKGLTIFN---SMRKEYGVEPQIEHYGCIVDLLG 448

Query: 390 KCGRMENSVELFAESPKR-NHVTWNTMIV-----GYVQLGE-VGKAMI 430
           + G +  + ++ +  P       W  ++      G V+LGE VGK ++
Sbjct: 449 RAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILL 496



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 142/337 (42%), Gaps = 71/337 (21%)

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCG-----RMENSVELFAESPKRNHVTWNTMIV 417
            Q H+L++R G L D +++ +L+  YA          E+S+ +F    K N   WN MI 
Sbjct: 52  KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 111

Query: 418 GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY-- 475
             ++  E  KA++++ +M+       + TY +VL+AC+    +  G+QVH   VK     
Sbjct: 112 VCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGG 171

Query: 476 ------------------------------DMDVVVANALIDMYAKCGSITDARLVFDMM 505
                                         ++D V  NA+ID Y + G +  AR +F+ M
Sbjct: 172 DGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGM 231

Query: 506 ND------WN--------------------------EVSWNAMISGYSMHGLSAEVLKVF 533
            D      WN                          E+SW+AMI GY   G   E L++F
Sbjct: 232 PDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIF 291

Query: 534 DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGR 593
             MQ+   RP       VLSAC+N G L+QG  +  +      I+      TS+V +  +
Sbjct: 292 HQMQKEKIRPRKFVLPSVLSACANLGALDQGR-WIHTYAKRNSIQLDGVLGTSLVDMYAK 350

Query: 594 AGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
            G +D A ++ E +     V  W A++G   +H   E
Sbjct: 351 CGRIDLAWEVFEKMS-NKEVSSWNAMIGGLAMHGRAE 386


>gi|22328607|ref|NP_193141.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635650|sp|O23266.3|PP308_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g14050, mitochondrial; Flags: Precursor
 gi|332657965|gb|AEE83365.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 612

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 226/603 (37%), Positives = 345/603 (57%), Gaps = 46/603 (7%)

Query: 249 LKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDV 308
           L+ C    T+  AK+ H   +K        +A  L+++Y K G  S+A ++F+EMP +D 
Sbjct: 10  LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69

Query: 309 IPWSFMIARYAQTDLSIDAVELFCRMRQAF-VAPNQFTFVSVLQACATMEGLDLGNQIHS 367
           I W+ ++    Q +LS   + +F  +  +  + P+ F F ++++ACA +  +D G Q+H 
Sbjct: 70  IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129

Query: 368 LVVRVGLLSDVFVSNALMDVYAKCG-------------------------------RMEN 396
             +     +D  V ++L+D+YAKCG                               R E 
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATE-VTYSSVLRACA 455
           ++ELF   P +N  +W  +I G+VQ G+  +A  +F++M  E+V   + +  SS++ ACA
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
           +LAA   G QVH L +   +D  V ++NALIDMYAKC  +  A+ +F  M   + VSW +
Sbjct: 250 NLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTS 309

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           +I G + HG + + L ++D M   G +PN +TFVG++ ACS+ G +E+G   F+SM  +Y
Sbjct: 310 LIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDY 369

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS 635
           GI P ++HYT ++ LLGR+G LD+A  LI  +PF P    W ALL AC      ++G   
Sbjct: 370 GIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRI 429

Query: 636 AQHIL-DFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVH 683
           A H++  F+ +D +T++LLSNIYA A  W K +            K+PG S +E +    
Sbjct: 430 ADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETE 489

Query: 684 YFRAGDTSHADMNIIRGMLEWLNMKSR-KAGYIPDLSAVLRDVREDEKERYLWVHSEKLA 742
            F AG+TSH     I  +L+ L  + R + GY+PD S +L D+ E EKE+ L+ HSE+ A
Sbjct: 490 VFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSA 549

Query: 743 LAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCG 802
           +A+ L K  P +PIRI+KNLR+C DCH  +K IS+I +REII+RD  R+HHF+ G CSC 
Sbjct: 550 VAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCN 609

Query: 803 DFW 805
           DFW
Sbjct: 610 DFW 612



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/407 (24%), Positives = 188/407 (46%), Gaps = 51/407 (12%)

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND---CFEEALNFFSQMRA 235
           + A + KLG      +   L++ +  CG    A +VFD + +     +   L   +Q   
Sbjct: 25  LHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANL 84

Query: 236 VG--------------FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
            G               +P++F F+ ++KAC  L +I   +  H   + + Y  D  V  
Sbjct: 85  SGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKS 144

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVEL----------- 330
           +L+D+Y K G +++A+ +F+ +  K+ I W+ M++ YA++    +A+EL           
Sbjct: 145 SLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYS 204

Query: 331 --------------------FCRMRQAFV-APNQFTFVSVLQACATMEGLDLGNQIHSLV 369
                               F  MR+  V   +     S++ ACA +     G Q+H LV
Sbjct: 205 WTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLV 264

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAM 429
           + +G  S VF+SNAL+D+YAKC  +  + ++F+    R+ V+W ++IVG  Q G+  KA+
Sbjct: 265 IALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKAL 324

Query: 430 IMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV-HCLTVKANYDMDVVVANALIDM 488
            ++  M+   V   EVT+  ++ AC+ +  +E G ++   +T        +     L+D+
Sbjct: 325 ALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDL 384

Query: 489 YAKCGSITDAR-LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
             + G + +A  L+  M    +E +W A++S     G     +++ D
Sbjct: 385 LGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIAD 431



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 114/192 (59%), Gaps = 1/192 (0%)

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           ++  LQ CA    L     +H+ +V++G++    ++N L++VY KCG   +++++F E P
Sbjct: 6   YLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMP 65

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAM-IMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
            R+H+ W +++    Q    GK + +  S      +   +  +S++++ACA+L +++ G 
Sbjct: 66  HRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGR 125

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
           QVHC  + + Y  D VV ++L+DMYAKCG +  A+ VFD +   N +SW AM+SGY+  G
Sbjct: 126 QVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSG 185

Query: 525 LSAEVLKVFDLM 536
              E L++F ++
Sbjct: 186 RKEEALELFRIL 197



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 95/415 (22%), Positives = 173/415 (41%), Gaps = 63/415 (15%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKG--NCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
           Y   LQ C +N  L TA  +H  ++K G   C  L   N L+NVY K      A ++FDE
Sbjct: 6   YLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPL--ANTLVNVYGKCGAASHALQVFDE 63

Query: 117 MPERNTI---SFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNP--FAFTAFLKVLVSMG 171
           MP R+ I   S +T +    +S + +       +       L P  F F+A +K   ++G
Sbjct: 64  MPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSS----SGLRPDDFVFSALVKACANLG 119

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--------------- 216
             +    V        + ++  V ++L+D ++ CG +  A+ VFD               
Sbjct: 120 SIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVS 179

Query: 217 -----GLFNDCFE---------------------------EALNFFSQMRAVGFKP-NNF 243
                G   +  E                           EA + F++MR       +  
Sbjct: 180 GYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPL 239

Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
             + ++ AC  L      +  HG  +   ++  ++++ AL+D+Y K  ++  A+ IF  M
Sbjct: 240 VLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRM 299

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
             +DV+ W+ +I   AQ   +  A+ L+  M    V PN+ TFV ++ AC+ +  ++ G 
Sbjct: 300 RHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGR 359

Query: 364 QI-HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMI 416
           ++  S+    G+   +     L+D+  + G ++ +  L    P   +  TW  ++
Sbjct: 360 ELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALL 414



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/283 (22%), Positives = 120/283 (42%), Gaps = 21/283 (7%)

Query: 97  LLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHE-L 155
           +++ Y K  R  +A +LF  +P +N  S+   I G+  S + +EA  +F+ + RE  + L
Sbjct: 177 MVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDIL 236

Query: 156 NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF 215
           +P   ++ +    ++  +     V   V  LG DS  F+  ALID ++ C  V  A+ +F
Sbjct: 237 DPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIF 296

Query: 216 DGLFNDCF----------------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIR 259
             + +                   E+AL  +  M + G KPN  TF  ++ AC  +  + 
Sbjct: 297 SRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVE 356

Query: 260 VAKSAHGCALKT-CYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIAR 317
             +       K       L     LLDL  +SG +  A  +   MP   D   W+ +++ 
Sbjct: 357 KGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSA 416

Query: 318 YAQTDLSIDAVELFCRMRQAF--VAPNQFTFVSVLQACATMEG 358
             +       + +   +  +F    P+ +  +S + A A++ G
Sbjct: 417 CKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWG 459


>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
 gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 214/615 (34%), Positives = 339/615 (55%), Gaps = 48/615 (7%)

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           +R +  K    +F   L++C  L  +++    H   ++     D++ A  L+ +      
Sbjct: 9   LRKLELKNPKLSF---LESCTTLSHLKII---HAHLIRAHTIFDVFAASCLISISINKNL 62

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           +  A ++F ++   ++  ++  I  ++ +     +   + + ++  + P+  T+  +++A
Sbjct: 63  LDYAAQVFYQIQNPNLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKA 122

Query: 353 CATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYA----------------------- 389
           C     LD+G Q H  ++R G  SDV+V N+L+ +Y+                       
Sbjct: 123 CTQKGSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSW 182

Query: 390 --------KCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVP 441
                   K G + ++ +LF + P++N VTW+ MI GY +     KA+ ++  +  E V 
Sbjct: 183 TSMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVH 242

Query: 442 ATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLV 501
           A E    SV+ +CA L ALE G + H   ++    +++++  AL+DMYA+CGSI  A  V
Sbjct: 243 ANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWV 302

Query: 502 FDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLL 561
           FD +   + +SW  +I+G++MHG + + L+ F  M++ G  P  +TF  VLSACS+GGL+
Sbjct: 303 FDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLV 362

Query: 562 EQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLG 621
           E+G   F+SM  +Y IEP +EHY  MV LLGRAG L +A K +  +P +P+  IW ALLG
Sbjct: 363 ERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLG 422

Query: 622 ACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKE 670
           AC IH N EI   + + +++ +PE    +VLLSNIYA    W           E+   K 
Sbjct: 423 ACRIHKNSEIAERAGKTLIELKPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVKP 482

Query: 671 PGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEK 730
           PG +  E  G VH F  GD +H ++  I  M E +  K R AGY  +    L D+ E+EK
Sbjct: 483 PGYTLFEMDGKVHKFTIGDKTHPEIQQIERMWEEILGKIRLAGYTGNNDDALFDIDEEEK 542

Query: 731 ERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHR 790
           E  +  HSEKLA+A+A+ +     PIRI+KNLR+C DCHTA K+ISK+ +RE+I+RD +R
Sbjct: 543 ESNIHRHSEKLAIAYAIMRTKGHDPIRIVKNLRVCEDCHTATKLISKVYERELIVRDRNR 602

Query: 791 FHHFQDGCCSCGDFW 805
           FHHF+ G CSC D+W
Sbjct: 603 FHHFKGGACSCMDYW 617



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 184/334 (55%), Gaps = 35/334 (10%)

Query: 224 EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
           +++ +F+ Q +  G  P+N T+ F++KAC    ++ +   AHG  ++  ++ D+YV  +L
Sbjct: 95  DKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFDSDVYVQNSL 154

Query: 284 LDLYT-------------------------------KSGEISNARRIFEEMPKKDVIPWS 312
           + +Y+                               KSG++++AR++F++MP+K+++ WS
Sbjct: 155 VTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLVTWS 214

Query: 313 FMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV 372
            MI+ YA+      A+EL+  ++   V  N+   VSV+ +CA +  L+LG + H  ++R 
Sbjct: 215 VMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDYILRN 274

Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMF 432
            +  ++ +  AL+D+YA+CG ++ ++ +F + P R+ ++W T+I G+   G   KA+  F
Sbjct: 275 KMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYF 334

Query: 433 SKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYA 490
           S+M +  +   E+T+++VL AC+    +E G+++   ++K +Y ++  + +   ++D+  
Sbjct: 335 SRMEKAGLTPREITFTAVLSACSHGGLVERGLELF-ESMKRDYRIEPRLEHYGCMVDLLG 393

Query: 491 KCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
           + G + +A + V +M    N   W A++    +H
Sbjct: 394 RAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIH 427



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/403 (20%), Positives = 172/403 (42%), Gaps = 52/403 (12%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L+SC     L+    IH  +++     D+FA + L+++ +  N L  A ++F ++   N 
Sbjct: 22  LESCTTLSHLKI---IHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNPNL 78

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
             + + I+G++ S    ++   +    R G   +   +   +K     G  ++       
Sbjct: 79  FIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQ 138

Query: 183 VYKLGHDSNAFVGTALIDAFSVCG-------------CVEF------------------A 211
           + + G DS+ +V  +L+  +S  G             C++                   A
Sbjct: 139 IIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSA 198

Query: 212 RKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGL 255
           RK+FD +                 N  F++A+  +  +++ G   N      V+ +C  L
Sbjct: 199 RKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHL 258

Query: 256 DTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMI 315
             + + + AH   L+    ++L +  AL+D+Y + G I  A  +F+++P +D + W+ +I
Sbjct: 259 GALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLI 318

Query: 316 ARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLL 375
           A +A    +  A+E F RM +A + P + TF +VL AC+    ++ G ++   + R   +
Sbjct: 319 AGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMKRDYRI 378

Query: 376 SDVFVSNALM-DVYAKCGRMENSVELFAESP-KRNHVTWNTMI 416
                    M D+  + G++  + +   E P K N   W  ++
Sbjct: 379 EPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALL 421



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 116/259 (44%), Gaps = 30/259 (11%)

Query: 82  VLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEA 141
           V ++ +CLD+ +   ++  Y+K   +  A KLFD+MPE+N +++   I GY  +S F +A
Sbjct: 170 VFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKA 229

Query: 142 VGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDA 201
           + L+  L  EG   N     + +     +G  EL       + +     N  +GTAL+D 
Sbjct: 230 IELYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDM 289

Query: 202 FSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTF 245
           ++ CG ++ A  VFD L                 +   E+AL +FS+M   G  P   TF
Sbjct: 290 YARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITF 349

Query: 246 AFVLKAC-------LGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
             VL AC        GL+     K  +        E  L     ++DL  ++G+++ A +
Sbjct: 350 TAVLSACSHGGLVERGLELFESMKRDYRI------EPRLEHYGCMVDLLGRAGKLAEAEK 403

Query: 299 IFEEMPKKDVIP-WSFMIA 316
              EMP K   P W  ++ 
Sbjct: 404 FVNEMPMKPNAPIWGALLG 422


>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 684

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 232/664 (34%), Positives = 377/664 (56%), Gaps = 32/664 (4%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           + + H++   L+ C  + D+   M +H  V K G   D++  N LL +Y     L DA +
Sbjct: 7   QLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARR 66

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGL-FSTLHREGHELNPFAFTAFLKVLVSMG 171
           LFDEMPER+ +S+ T I   +V+  + EA    F  + R   + N  +  + L +  ++ 
Sbjct: 67  LFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALE 126

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--------------- 216
             E+   +     K+G DS      AL+DA+  CG V+   +VF+               
Sbjct: 127 DEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIIN 186

Query: 217 GLF--NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
           GL     C++ ALN F  M   G +PN+ T + +L   + L+  +  K  HG +++   E
Sbjct: 187 GLACKGRCWD-ALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTE 245

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
            D+++A +L+D+Y KSG  + A  IF  + +++++ W+ MIA YA   L ++A+    +M
Sbjct: 246 TDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQM 305

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
           ++    PN  TF +VL ACA +  L  G +IH++ VR+GL SD+FVSN+L+D+YAKCG +
Sbjct: 306 QETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCL 365

Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
            ++  +F  S +++ V++N +I+GY +  +  +++ +FS+M         V++  V+ AC
Sbjct: 366 HSARNVFNTS-RKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISAC 424

Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
           A+LAAL+ G +VH + ++ +    + V+N+L+D Y KCG I  A  +F+ +   +  SWN
Sbjct: 425 ANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWN 484

Query: 515 AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
            MI GY M G     + +F+ M+    + + ++++ VLSACS+GGL+E+G  YF  M+A 
Sbjct: 485 TMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQ 544

Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL 634
             +EP   HYT MV LLGRAG +++AAKLI+ +P  P   IW ALLGAC I+ NVE+GR 
Sbjct: 545 R-LEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGNVELGRR 603

Query: 635 SAQHILDFEPEDEATHVLLSNIYAMARSWEKA-----------ASKEPGLSWIENQGMVH 683
           +A+H+ + +P+    ++LLSNIYA    W++A           A K PG SW++    VH
Sbjct: 604 AAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSWVQIYDQVH 663

Query: 684 YFRA 687
            F A
Sbjct: 664 AFVA 667



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 120/365 (32%), Positives = 196/365 (53%), Gaps = 2/365 (0%)

Query: 237 GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNA 296
           G + ++ TF FVLK C     I      HG   K  ++ D+YV   LL LY   G +++A
Sbjct: 5   GVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDA 64

Query: 297 RRIFEEMPKKDVIPWSFMIARYA-QTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACAT 355
           RR+F+EMP++DV+ W+ +I   +   D +      F  + ++ + PN  + +S+L   A 
Sbjct: 65  RRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAA 124

Query: 356 MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTM 415
           +E  ++  +IH   V+VGL S V   NAL+D Y KCG ++   ++F E+ ++N V+WN++
Sbjct: 125 LEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSI 184

Query: 416 IVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY 475
           I G    G    A+  F  M++       VT SS+L     L   + G ++H  +++   
Sbjct: 185 INGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGT 244

Query: 476 DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDL 535
           + D+ +AN+LIDMYAK G  T+A  +F  ++  N VSWNAMI+ Y+++ L  E ++    
Sbjct: 245 ETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQ 304

Query: 536 MQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAG 595
           MQ+ G  PN +TF  VL AC+  G L  G+    +M    G+   +    S++ +  + G
Sbjct: 305 MQETGECPNAVTFTNVLPACARLGFLGPGKE-IHAMGVRIGLTSDLFVSNSLIDMYAKCG 363

Query: 596 HLDKA 600
            L  A
Sbjct: 364 CLHSA 368



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 1/119 (0%)

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGS 494
           M+   V   + T+  VL+ C+    +  GM+VH +  K  +D DV V N L+ +Y  CG 
Sbjct: 1   MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGF 60

Query: 495 ITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG-WRPNNLTFVGVL 552
           + DAR +FD M + + VSWN +I   S++G   E    +  M  R   +PN ++ + +L
Sbjct: 61  LNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLL 119


>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
          Length = 1113

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 244/752 (32%), Positives = 407/752 (54%), Gaps = 45/752 (5%)

Query: 51  VSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDA 110
           +   +S ++++ L+SCI+  D +    +H ++++     D    N L+++Y K      A
Sbjct: 57  IRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKA 116

Query: 111 TKLFDEM---PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVL 167
             +F+ M    +R+ +S+   +  Y  + + ++A+ +F      G   N + +TA ++  
Sbjct: 117 EDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRAC 176

Query: 168 VSMGWAELCPCVFACVYKLGH-DSNAFVGTALIDAFSVCG--CVEFARKVFDGL------ 218
            +  +  +       + K GH +S+  VG +LID F V G    E A KVFD +      
Sbjct: 177 SNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMF-VKGENSFENAYKVFDKMSELNVV 235

Query: 219 -----FNDCFE-----EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCA 268
                   C +     EA+ FF  M   GF+ + FT + V  AC  L+ + + K  H  A
Sbjct: 236 TWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWA 295

Query: 269 LKTCYEMDLYVAVALLDLYTK---SGEISNARRIFEEMPKKDVIPWSFMIARYAQT-DLS 324
           +++    D  V  +L+D+Y K    G + + R++F+ M    V+ W+ +I  Y +  +L+
Sbjct: 296 IRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLA 353

Query: 325 IDAVELFCRM-RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNA 383
            +A+ LF  M  Q  V PN FTF S  +AC  +    +G Q+     + GL S+  V+N+
Sbjct: 354 TEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANS 413

Query: 384 LMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPAT 443
           ++ ++ K  RME++   F    ++N V++NT + G  +     +A  + S++ E ++  +
Sbjct: 414 VISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVS 473

Query: 444 EVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFD 503
             T++S+L   A++ ++  G Q+H   VK     +  V NALI MY+KCGSI  A  VF+
Sbjct: 474 AFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFN 533

Query: 504 MMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQ 563
            M + N +SW +MI+G++ HG +  VL+ F+ M + G +PN +T+V +LSACS+ GL+ +
Sbjct: 534 FMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSE 593

Query: 564 GEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGAC 623
           G  +F SM  ++ I+P +EHY  MV LL RAG L  A + I  +PFQ  V++WR  LGAC
Sbjct: 594 GWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGAC 653

Query: 624 IIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPG 672
            +H+N E+G+L+A+ IL+ +P + A ++ LSNIYA A  WE++             KE G
Sbjct: 654 RVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGG 713

Query: 673 LSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDV----RED 728
            SWIE    +H F  GDT+H + + I   L+ L  + ++ GY+PD   VL  +     E 
Sbjct: 714 CSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEA 773

Query: 729 EKERYLWVHSEKLALAFALFKMPPSSPIRIIK 760
           EKER L+ HSEK+A+AF L     S P+++I+
Sbjct: 774 EKERLLYQHSEKIAVAFGLISTSKSRPLKMIQ 805



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 129/289 (44%), Gaps = 30/289 (10%)

Query: 47  ITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNR 106
           IT    E N  +++++ ++C    D +    +  Q  K+G   +    N +++++VK +R
Sbjct: 364 ITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDR 423

Query: 107 LPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV 166
           + DA + F+ + E+N +S+ T + G   +  F +A  L S +      ++ F F + L  
Sbjct: 424 MEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSG 483

Query: 167 LVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------- 216
           + ++G       + + V KLG   N  V  ALI  +S CG ++ A +VF+          
Sbjct: 484 VANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISW 543

Query: 217 -----GLFNDCFE-EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALK 270
                G     F    L  F+QM   G KPN  T+  +L AC  +  +    S       
Sbjct: 544 TSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLV----SEGWRHFN 599

Query: 271 TCYE-------MDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPW 311
           + YE       M+ Y    ++DL  ++G +++A      MP + DV+ W
Sbjct: 600 SMYEDHKIKPKMEHY--ACMVDLLCRAGLLTDAFEFINTMPFQADVLVW 646


>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
 gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 254/866 (29%), Positives = 419/866 (48%), Gaps = 115/866 (13%)

Query: 32  AALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDL 91
           ++LS       T  P T S S    H     L+SC    +++    IH  ++      D 
Sbjct: 12  SSLSPSIHKPPTLNPKT-SHSVLRPHWIIDLLKSC---SNIREFSPIHAHLITANLIHDP 67

Query: 92  FATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHRE 151
             T+ +L   + +N L  A ++     E  +I + T ++         E +  +  +  +
Sbjct: 68  EITSQVLAFLLSVNNLDCAHQILSYSHEPESIIWNTLLENKLKEGCPQEVLECYYHMVTQ 127

Query: 152 GHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFA 211
           G  L+   F   +         +L   V   + K G   N  +   L+  +S CG ++  
Sbjct: 128 GVLLDISTFHFLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEV 187

Query: 212 RKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGL 255
            ++F+ +                    + EAL+ F +M   G  P+  T   ++  C  L
Sbjct: 188 CQLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKL 247

Query: 256 DTIRVAK--------------------------------SAHGCALKTC--YEMDLYVAV 281
             + + K                                 AHG  L  C   E+D+ +  
Sbjct: 248 KDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHG-LLSRCDESEVDVVLWT 306

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
            L+  Y KS +I  AR++F++M ++ ++ W+ M++ Y Q     +++ELF +MR   V P
Sbjct: 307 TLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIP 366

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           ++   V+VL AC  +E  DLG  +H+ +V  G+L D F+ NAL+D+YAKCG+++ ++  F
Sbjct: 367 DEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTF 426

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE----------------------- 438
            + P ++  +WN+M+ G+ + G V KA   F+K+ E+                       
Sbjct: 427 EQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFE 486

Query: 439 --------QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYA 490
                    V   + T  S+L +CA + AL  G+ V+    K    +D ++  ALIDMY 
Sbjct: 487 IFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYG 546

Query: 491 KCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVG 550
           KCG +  A  +F  + + N   W AM++ Y+M G + E + ++  M++RG +P+++TF+ 
Sbjct: 547 KCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIA 606

Query: 551 VLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQ 610
           +L+ACS+GGL+++G  YF  + + Y I P I HY  MV LLGR GHL++  K IE +P +
Sbjct: 607 LLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMPIE 666

Query: 611 PSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW------- 663
           P V IW +L+ AC  H+NVE+   + + +++ +P +   HVLLSNIYA A  W       
Sbjct: 667 PDVSIWSSLMRACRSHHNVELAEQAFKQLIEIDPTNNGAHVLLSNIYADAGRWDDVSKVR 726

Query: 664 ----EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLS 719
               E    K+PG + IE  G+VH F A +   AD   I  ML+ +  +      + D +
Sbjct: 727 TKLHETGVPKQPGFTMIEQNGVVHEFVASNLVSAD---ILCMLQDIERRLLVKQELSDTT 783

Query: 720 AVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIV 779
           +                HSE+LA+AF L     +SPIR++ ++R+C DCH+ +K+IS+  
Sbjct: 784 S---------------QHSERLAVAFGLINNQENSPIRVVNSVRMCRDCHSVMKLISQAY 828

Query: 780 QREIIIRDVHRFHHFQDGCCSCGDFW 805
            REI+IRD +RFH F DG CSC D+W
Sbjct: 829 DREIVIRDNYRFHRFTDGHCSCKDYW 854


>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 705

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 242/743 (32%), Positives = 381/743 (51%), Gaps = 107/743 (14%)

Query: 47  ITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNR 106
           +   +S  +S  +A  L +C+++  +  A  +H +++K     ++F  N L++VY K   
Sbjct: 10  VVGDLSFLDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGF 69

Query: 107 LPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV 166
           L DA K+FD M +RNT                                   F++ A L  
Sbjct: 70  LEDARKVFDHMQQRNT-----------------------------------FSWNAVLGA 94

Query: 167 LVSMGWAELCPCVFACVYKLGHDS-NAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEE 225
           L   G  +    +F C+ +    S NA V               FA++       D FEE
Sbjct: 95  LTKFGALDEALNLFKCMPERDQCSWNAMVSG-------------FAQR-------DRFEE 134

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           AL F   M +  F  N ++F   L AC GL  + +    HG   K+ Y +D+Y+  AL+D
Sbjct: 135 ALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVD 194

Query: 286 LYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFT 345
           +Y+K   +++A+R F++M  ++++ W+ +I  Y Q   +  A+E+F RM    + P++ T
Sbjct: 195 MYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEIT 254

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVG-LLSDVFVSNALMDVYAKCGRMENSVELFAES 404
             SV  ACA++  +  G QIH+ V++     +D+ + NAL+D+YAKC R+  +  +F   
Sbjct: 255 LASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRM 314

Query: 405 P-------------------------------KRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
           P                               +RN V+WN +I GY Q GE  +A+ +F 
Sbjct: 315 PLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFL 374

Query: 434 KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY------DMDVVVANALID 487
            +  E +  T  T+ ++L ACA+LA L+ G Q H   +K  +      D D+ V N+LID
Sbjct: 375 LLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLID 434

Query: 488 MYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLT 547
           MY KCG + D RLVF+ M + + VSWNAMI GY+ +G   E L++F  M   G RP+++T
Sbjct: 435 MYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVT 494

Query: 548 FVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGI 607
            +GVLSACS+ GL+E+G  YF+SM   +G+ P  +HYT MV LLGRAG LD+A  LI+ +
Sbjct: 495 MIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTM 554

Query: 608 PFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA 667
           P +P  ++W +LL AC +H N+ +G+  A+ +L+ +P +   +VLLSN+YA    W+   
Sbjct: 555 PMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVV 614

Query: 668 S-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIP 716
                       K+PG SWI  Q  +H F   D  H     I  +L+ L  + ++ GY+P
Sbjct: 615 RVRKQMRQMGVIKQPGCSWISIQSHLHVFMVKDKRHPHKKDIYLILKILTEQMKRVGYVP 674

Query: 717 DLSAVLRDVREDEKERYLWVHSE 739
           +  A   +  E+E +  L +HSE
Sbjct: 675 E--ADDDEPYEEESDSELILHSE 695


>gi|356531902|ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 1011

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 235/670 (35%), Positives = 351/670 (52%), Gaps = 77/670 (11%)

Query: 196  TALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGL 255
            T LI  FS  G  E   K+F                +MRA G  PN +T + + K C   
Sbjct: 359  TILISGFSRAGSSEVVFKLF---------------REMRAKGACPNQYTLSSLFKCCSLD 403

Query: 256  DTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMI 315
              +++ K  H   L+   + D+ +  ++LDLY K      A R+FE M + DV+ W+ MI
Sbjct: 404  INLQLGKGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAERVFELMNEGDVVSWNIMI 463

Query: 316  ARYAQTDLSIDAVELFCRM---------------------RQAF----------VAPNQF 344
            + Y +      ++++F R+                     RQA              +  
Sbjct: 464  SAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQALEQLYCMVECGTEFSVV 523

Query: 345  TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
            TF   L   +++  ++LG Q+H +V++ G   D F+ ++L+++Y KCGRM+N+  +  + 
Sbjct: 524  TFSIALILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMYCKCGRMDNASIVLKDV 583

Query: 405  P----------------KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYS 448
            P                K   V+W  M+ GYV  G+    +  F  M+ E V     T +
Sbjct: 584  PLDFLKNGNAGVTCKELKAGIVSWGLMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVT 643

Query: 449  SVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDW 508
            +++ ACA+   LE G  VH    K  + +D  V ++LIDMY+K GS+ DA  +F   N+ 
Sbjct: 644  TIISACANAGILEFGRHVHAYNHKIGHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTNEP 703

Query: 509  NEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYF 568
            N V W +MISG ++HG   + + +F+ M  +G  PN +TF+GVL+AC + GLLE+G  YF
Sbjct: 704  NIVFWTSMISGCALHGQGKQAICLFEEMLNQGIIPNEVTFLGVLNACCHAGLLEEGCRYF 763

Query: 569  KSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLI--EGIPFQPSVMIWRALLGACIIH 626
            + M   Y I P +EH TSMV L GRAGHL +    I   GI    SV  W++ L +C +H
Sbjct: 764  RMMKDAYCINPGVEHCTSMVDLYGRAGHLTETKNFIFENGISHLTSV--WKSFLSSCRLH 821

Query: 627  NNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSW 675
             NVE+G+  ++ +L   P D   +VLLSN+ A    W++AA            K+PG SW
Sbjct: 822  KNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLMHQRGIKKQPGQSW 881

Query: 676  IENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLW 735
            I+ +  +H F  GD SH     I   L+ L  + ++ GY  D+  V++DV E++ E  + 
Sbjct: 882  IQLKDQIHTFIMGDRSHPQDEEIYSYLDILIGRLKEIGYSFDVKLVMQDVEEEQGEVLIS 941

Query: 736  VHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQ 795
             HSEKLA+ F +      +PIRIIKNLRIC DCH  IK  S+++ REII+RD+HRFHHF+
Sbjct: 942  HHSEKLAVVFGIINTANRTPIRIIKNLRICTDCHNFIKYASQLLDREIILRDIHRFHHFK 1001

Query: 796  DGCCSCGDFW 805
             G CSCGD+W
Sbjct: 1002 HGGCSCGDYW 1011



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 206/416 (49%), Gaps = 59/416 (14%)

Query: 265 HGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLS 324
           H  ++K      L  A  LL LY KS  + +AR++F+E+P+++   W+ +I+ +++   S
Sbjct: 312 HALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGSS 371

Query: 325 IDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNAL 384
               +LF  MR     PNQ+T  S+ + C+    L LG  +H+ ++R G+ +DV + N++
Sbjct: 372 EVVFKLFREMRAKGACPNQYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNSI 431

Query: 385 MDVYAKC-------------------------------GRMENSVELFAESPKRNHVTWN 413
           +D+Y KC                               G +E S+++F   P ++ V+WN
Sbjct: 432 LDLYLKCKVFEYAERVFELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSWN 491

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
           T++ G +Q G   +A+     M+E     + VT+S  L   +SL+ +E G Q+H + +K 
Sbjct: 492 TIVDGLMQFGYERQALEQLYCMVECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLKF 551

Query: 474 NYDMDVVVANALIDMYAKCGSITDARLV-----FDMMNDWNE-----------VSWNAMI 517
            +  D  + ++L++MY KCG + +A +V      D + + N            VSW  M+
Sbjct: 552 GFCRDGFIRSSLVEMYCKCGRMDNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLMV 611

Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE---AYFKSMVAN 574
           SGY  +G   + LK F LM +     +  T   ++SAC+N G+LE G    AY      N
Sbjct: 612 SGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAY------N 665

Query: 575 YGIEPCIEHY--TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
           + I   I+ Y  +S++ +  ++G LD A  +      +P+++ W +++  C +H  
Sbjct: 666 HKIGHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTN-EPNIVFWTSMISGCALHGQ 720



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 120/513 (23%), Positives = 229/513 (44%), Gaps = 67/513 (13%)

Query: 77  TIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSS 136
           T+H   +K G+   L + N LL +YVK + +  A KLFDE+P+RNT ++   I G++ + 
Sbjct: 310 TLHALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAG 369

Query: 137 QFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGT 196
                  LF  +  +G   N +  ++  K        +L   V A + + G D++  +G 
Sbjct: 370 SSEVVFKLFREMRAKGACPNQYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGN 429

Query: 197 ALIDAFSVCGCVEFARKVF----------------------------------------- 215
           +++D +  C   E+A +VF                                         
Sbjct: 430 SILDLYLKCKVFEYAERVFELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVS 489

Query: 216 -----DGLFNDCFE-EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCAL 269
                DGL    +E +AL     M   G + +  TF+  L     L  + + +  HG  L
Sbjct: 490 WNTIVDGLMQFGYERQALEQLYCMVECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVL 549

Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP----------------KKDVIPWSF 313
           K  +  D ++  +L+++Y K G + NA  + +++P                K  ++ W  
Sbjct: 550 KFGFCRDGFIRSSLVEMYCKCGRMDNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGL 609

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
           M++ Y       D ++ F  M +  V  +  T  +++ ACA    L+ G  +H+   ++G
Sbjct: 610 MVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYNHKIG 669

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
              D +V ++L+D+Y+K G ++++  +F ++ + N V W +MI G    G+  +A+ +F 
Sbjct: 670 HRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTNEPNIVFWTSMISGCALHGQGKQAICLFE 729

Query: 434 KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAK 491
           +ML + +   EVT+  VL AC     LE G + +   +K  Y ++  V +  +++D+Y +
Sbjct: 730 EMLNQGIIPNEVTFLGVLNACCHAGLLEEGCR-YFRMMKDAYCINPGVEHCTSMVDLYGR 788

Query: 492 CGSITDAR-LVFDMMNDWNEVSWNAMISGYSMH 523
            G +T+ +  +F+         W + +S   +H
Sbjct: 789 AGHLTETKNFIFENGISHLTSVWKSFLSSCRLH 821



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 95/174 (54%), Gaps = 3/174 (1%)

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
           +H+L V+ G L  +  +N L+ +Y K   M+++ +LF E P+RN  TW  +I G+ + G 
Sbjct: 311 LHALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGS 370

Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA 484
                 +F +M  +     + T SS+ + C+    L+ G  VH   ++   D DVV+ N+
Sbjct: 371 SEVVFKLFREMRAKGACPNQYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNS 430

Query: 485 LIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
           ++D+Y KC     A  VF++MN+ + VSWN MIS Y   G   +V K  D+ ++
Sbjct: 431 ILDLYLKCKVFEYAERVFELMNEGDVVSWNIMISAYLRAG---DVEKSLDMFRR 481



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 97/476 (20%), Positives = 190/476 (39%), Gaps = 84/476 (17%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N ++ ++  + C  + +LQ    +H  +L+ G   D+   N +L++Y+K      A ++F
Sbjct: 389 NQYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAERVF 448

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHRE----------------------- 151
           + M E + +S+   I  Y  +    +++ +F  L  +                       
Sbjct: 449 ELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQALE 508

Query: 152 --------GHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFS 203
                   G E +   F+  L +  S+   EL   +   V K G   + F+ ++L++ + 
Sbjct: 509 QLYCMVECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMYC 568

Query: 204 VCGCVEFARKVFDG--------------------------------LFNDCFEEALNFFS 231
            CG ++ A  V                                   ++N  +E+ L  F 
Sbjct: 569 KCGRMDNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLMVSGYVWNGKYEDGLKTFR 628

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
            M       +  T   ++ AC     +   +  H    K  + +D YV  +L+D+Y+KSG
Sbjct: 629 LMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYNHKIGHRIDAYVGSSLIDMYSKSG 688

Query: 292 EISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQ 351
            + +A  IF +  + +++ W+ MI+  A       A+ LF  M    + PN+ TF+ VL 
Sbjct: 689 SLDDAWTIFRQTNEPNIVFWTSMISGCALHGQGKQAICLFEEMLNQGIIPNEVTFLGVLN 748

Query: 352 ACATMEGLDLGNQIHSLVVRVGLLSDVFVSN-------ALMDVYAKCGRMENSVELFAES 404
           AC     L+ G +         ++ D +  N       +++D+Y + G +  +     E+
Sbjct: 749 ACCHAGLLEEGCRYFR------MMKDAYCINPGVEHCTSMVDLYGRAGHLTETKNFIFEN 802

Query: 405 PKRNHVT--WNTMIVG--YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
              +H+T  W + +      +  E+GK +   S+ML +  P+    Y  +   CAS
Sbjct: 803 GI-SHLTSVWKSFLSSCRLHKNVEMGKWV---SEMLLQVAPSDPGAYVLLSNMCAS 854



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 66/290 (22%), Positives = 125/290 (43%), Gaps = 46/290 (15%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           +EF+  +++ +L        ++    +H  VLK G C D F  + L+ +Y K  R+ +A+
Sbjct: 518 TEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMYCKCGRMDNAS 577

Query: 112 KLFDEMP----------------ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHEL 155
            +  ++P                +   +S+   + GY  + ++ + +  F  + RE   +
Sbjct: 578 IVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLMVSGYVWNGKYEDGLKTFRLMVRELVVV 637

Query: 156 NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF 215
           +    T  +    + G  E    V A  +K+GH  +A+VG++LID +S  G ++ A  +F
Sbjct: 638 DIRTVTTIISACANAGILEFGRHVHAYNHKIGHRIDAYVGSSLIDMYSKSGSLDDAWTIF 697

Query: 216 -----------DGLFNDCF-----EEALNFFSQMRAVGFKPNNFTFAFVLKACL------ 253
                        + + C      ++A+  F +M   G  PN  TF  VL AC       
Sbjct: 698 RQTNEPNIVFWTSMISGCALHGQGKQAICLFEEMLNQGIIPNEVTFLGVLNACCHAGLLE 757

Query: 254 -GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR-IFE 301
            G    R+ K A+      C    +    +++DLY ++G ++  +  IFE
Sbjct: 758 EGCRYFRMMKDAY------CINPGVEHCTSMVDLYGRAGHLTETKNFIFE 801


>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
 gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
          Length = 703

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 238/723 (32%), Positives = 376/723 (52%), Gaps = 82/723 (11%)

Query: 95  NVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHE 154
           N ++  Y    R  +A KLFD+MPERNTIS+   + GY  +    EA  +F  +     E
Sbjct: 51  NAIVAGYFHNKRPAEAQKLFDKMPERNTISWNGLVSGYVKNGMISEARKVFDKMP----E 106

Query: 155 LNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKV 214
            N  ++T+ ++  V  G  +    +F   +++  + N    T ++      G V+ AR++
Sbjct: 107 RNVVSWTSMVRGYVQEGLIDEAELLF---WRM-PEKNVVSWTVMLGGLIEDGRVDEARRL 162

Query: 215 FDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
           F                                        D I V              
Sbjct: 163 F----------------------------------------DMIPVK------------- 169

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
            D+  +  ++      G +S AR IF+EMP+++V+ W+ MI+ YA  +    A +LF   
Sbjct: 170 -DVVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLF--- 225

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
            +     N+ T+ ++L+       ++   ++   +     +  V   N ++  +   G +
Sbjct: 226 -EVMPDKNEVTWTAMLKGYTRSGRINEAAELFKAMP----VKPVAACNGMIMGFGLNGEV 280

Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
             +  +F +  +++  TW+ +I  Y + G   +A+ +FS M  E V     +  S+L  C
Sbjct: 281 GKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVC 340

Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
            SLA+L+ G QVH   V++++D+D+ V++ LI MY KCG +   + VFD  +  + V WN
Sbjct: 341 GSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWN 400

Query: 515 AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
           ++I+GY+ HG   + L+VF  M   G  P+ +TF+GVLSAC   G +++G   F+SM + 
Sbjct: 401 SIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSK 460

Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL 634
           Y ++   EHY  MV LLGRAG L++A  LIE +P +   ++W ALL AC  H N+++  +
Sbjct: 461 YQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLAEI 520

Query: 635 SAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVH 683
           +A+ +L  EP     ++LLSN+YA    W+  A           SK PG SWIE    VH
Sbjct: 521 AAKKLLQLEPSSAGPYILLSNLYASQSRWKDVAELRKTMRARNVSKSPGCSWIEVDNKVH 580

Query: 684 YFRAGDT-SHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLA 742
            F  G + SH +  +I   LE L    R+AGY PD S V+ DV E++K   L  HSEK+A
Sbjct: 581 MFTGGGSASHPEHEMIMKKLEKLGASLREAGYCPDGSFVMHDVDEEDKVHSLRHHSEKMA 640

Query: 743 LAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCG 802
           +A+ L K+P   PIR++KNLR+C DCH+AIK+I+++  REII+RD +RFHHF+DG CSC 
Sbjct: 641 VAYGLLKVPVGKPIRVMKNLRVCGDCHSAIKLIAQVTGREIILRDANRFHHFKDGLCSCR 700

Query: 803 DFW 805
           DFW
Sbjct: 701 DFW 703



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/389 (24%), Positives = 180/389 (46%), Gaps = 36/389 (9%)

Query: 49  FSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLP 108
           + + E N  S+   L   I++  +  A  +   +  K    D+ A+  ++       RL 
Sbjct: 133 WRMPEKNVVSWTVMLGGLIEDGRVDEARRLFDMIPVK----DVVASTNMIGGLCSEGRLS 188

Query: 109 DATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLV 168
           +A ++FDEMP+RN +++ + I GY ++++   A  LF  +     + N   +TA LK   
Sbjct: 189 EAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMP----DKNEVTWTAMLKGYT 244

Query: 169 SMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND------- 221
             G         A ++K            +I  F + G V  AR VFD +          
Sbjct: 245 RSGRINEA----AELFKAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSA 300

Query: 222 --------CFE-EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC 272
                    FE EAL  FS M+  G +PN  +   +L  C  L ++   +  H   +++ 
Sbjct: 301 LIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSH 360

Query: 273 YEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFC 332
           +++D+YV+  L+ +Y K G++   +R+F+    KD++ W+ +IA YAQ      A+E+F 
Sbjct: 361 FDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFH 420

Query: 333 RMRQAFVAPNQFTFVSVLQACA----TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVY 388
            M  +  AP++ TF+ VL AC       EGL++   + S   +V   ++ +    ++D+ 
Sbjct: 421 EMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKS-KYQVDQKTEHYA--CMVDLL 477

Query: 389 AKCGRMENSVELFAESP-KRNHVTWNTMI 416
            + G++  ++ L    P + + + W  ++
Sbjct: 478 GRAGKLNEAMNLIENMPVEADAIVWGALL 506



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 147/348 (42%), Gaps = 66/348 (18%)

Query: 284 LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM--------- 334
           +  + + G+I  AR IF+++  K V  W+ ++A Y       +A +LF +M         
Sbjct: 23  ISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKMPERNTISWN 82

Query: 335 ---------------RQAF---VAPNQFTFVSVLQACATMEGL-----------DLGNQI 365
                          R+ F      N  ++ S+++     EGL              N +
Sbjct: 83  GLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGY-VQEGLIDEAELLFWRMPEKNVV 141

Query: 366 HSLVVRVGLLSDVFVSNA--------LMDVYAKC---------GRMENSVELFAESPKRN 408
              V+  GL+ D  V  A        + DV A           GR+  + E+F E P+RN
Sbjct: 142 SWTVMLGGLIEDGRVDEARRLFDMIPVKDVVASTNMIGGLCSEGRLSEAREIFDEMPQRN 201

Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV-H 467
            V W +MI GY    +V  A  +F  M ++     EVT++++L+       +    ++  
Sbjct: 202 VVAWTSMISGYAMNNKVDVARKLFEVMPDK----NEVTWTAMLKGYTRSGRINEAAELFK 257

Query: 468 CLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSA 527
            + VK      V   N +I  +   G +  AR VFD M + ++ +W+A+I  Y   G   
Sbjct: 258 AMPVKP-----VAACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFEL 312

Query: 528 EVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           E L +F LMQ+ G RPN  + + +LS C +   L+ G      +V ++
Sbjct: 313 EALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSH 360



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 16/182 (8%)

Query: 464 MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMH 523
           M+   +  ++ +     +    I  +A+ G I  AR +FD +      SWNA+++GY  +
Sbjct: 1   MRFRLIPYRSYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHN 60

Query: 524 GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEH 583
              AE  K+FD M +R    N +++ G++S     G++ +    F  M      E  +  
Sbjct: 61  KRPAEAQKLFDKMPER----NTISWNGLVSGYVKNGMISEARKVFDKMP-----ERNVVS 111

Query: 584 YTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL-SAQHILDF 642
           +TSMV    + G +D+A  L   +P + +V+ W  +LG  I     E GR+  A+ + D 
Sbjct: 112 WTSMVRGYVQEGLIDEAELLFWRMP-EKNVVSWTVMLGGLI-----EDGRVDEARRLFDM 165

Query: 643 EP 644
            P
Sbjct: 166 IP 167


>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
 gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 620

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 219/590 (37%), Positives = 327/590 (55%), Gaps = 46/590 (7%)

Query: 262 KSAHGCALKTCYEMDLYVAVALLDL---YTKSGEISNARRIFEEMPKKDVIPWSFMIARY 318
           K  H   LKT    D Y     L      T S  +  A+ +F+   + D   W+ MI  +
Sbjct: 31  KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGF 90

Query: 319 AQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDV 378
           + +D    ++ L+ RM  +    N +TF S+L+AC+ +   +   QIH+ + ++G  +DV
Sbjct: 91  SCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDV 150

Query: 379 FVSNALMDVYA-------------------------------KCGRMENSVELFAESPKR 407
           +  N+L++ YA                               K G+M+ ++ LF +  ++
Sbjct: 151 YAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEK 210

Query: 408 NHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVH 467
           N ++W TMI GYVQ     +A+ +F +M    V    V+ ++ L ACA L ALE G  +H
Sbjct: 211 NAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIH 270

Query: 468 CLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSA 527
               K    MD V+   LIDMYAKCG + +A  VF  +   +  +W A+ISGY+ HG   
Sbjct: 271 SYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGR 330

Query: 528 EVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSM 587
           E +  F  MQ+ G +PN +TF  VL+ACS  GL+E+G+  F SM  +Y ++P IEHY  +
Sbjct: 331 EAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCI 390

Query: 588 VSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDE 647
           V LLGRAG LD+A + I+ +P +P+ +IW ALL AC IH N+E+G    + ++  +P   
Sbjct: 391 VDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHG 450

Query: 648 ATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMN 696
             +V  +NI+AM + W+KAA           +K PG S I  +G  H F AGD SH ++ 
Sbjct: 451 GRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIE 510

Query: 697 IIRGMLEWLNMKSRKAGYIPDLSAVLRD-VREDEKERYLWVHSEKLALAFALFKMPPSSP 755
            I+     +  K  + GY+P+L  +L D V +DE+E  +  HSEKLA+ + L K  P + 
Sbjct: 511 KIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGTI 570

Query: 756 IRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           IRI+KNLR+C DCH   K+ISKI +R+I++RD  RFHHF+DG CSCGD+W
Sbjct: 571 IRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 107/441 (24%), Positives = 191/441 (43%), Gaps = 62/441 (14%)

Query: 48  TFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNR- 106
           +FS+ E N +   + LQ C + ++L+    IH ++LK G   D +A    L+  +     
Sbjct: 7   SFSL-EHNLYETMSCLQRCSKQEELKQ---IHARMLKTGLMQDSYAITKFLSFCISSTSS 62

Query: 107 --LPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFL 164
             LP A  +FD     +T  +   I+G++ S +   ++ L+  +       N + F + L
Sbjct: 63  DFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLL 122

Query: 165 KVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-------- 216
           K   ++   E    + A + KLG++++ +   +LI++++V G  + A  +FD        
Sbjct: 123 KACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDV 182

Query: 217 -------------------GLFN--------------------DCFEEALNFFSQMRAVG 237
                               LF                     D  +EAL  F +M+   
Sbjct: 183 SWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSD 242

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR 297
            +P+N + A  L AC  L  +   K  H    KT   MD  +   L+D+Y K GE+  A 
Sbjct: 243 VEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEAL 302

Query: 298 RIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATME 357
            +F+ + KK V  W+ +I+ YA      +A+  F  M++  + PN  TF +VL AC+   
Sbjct: 303 EVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTG 362

Query: 358 GLDLGNQI-HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTM 415
            ++ G  I +S+     L   +     ++D+  + G ++ +     E P K N V W  +
Sbjct: 363 LVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGAL 422

Query: 416 -----IVGYVQLG-EVGKAMI 430
                I   ++LG E+G+ +I
Sbjct: 423 LKACRIHKNIELGEEIGEILI 443


>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
 gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
          Length = 569

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 214/534 (40%), Positives = 303/534 (56%), Gaps = 19/534 (3%)

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           +L  Y ++  +  A+  FE+MP KD   W+ MI  +AQ      A +LF  M       N
Sbjct: 44  MLSCYVRNSNMERAQAFFEDMPIKDTPSWNTMITGFAQNQQMDKARDLFLIMP----TKN 99

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
             T+ +++        LD   ++            V    A++  Y K GR+  +  LF 
Sbjct: 100 VVTWNAMISGYVECGDLDSALKL----FEKAPFKSVVAWTAMITGYMKLGRIGLAERLFE 155

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
           + P++N VTWN MI GY++       + +F  M+   +     T SS L  C+ L+AL+ 
Sbjct: 156 KMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQL 215

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G QVH L  K+    D     +LI MY KCG + D   +F  +   + V+WNAMISGY+ 
Sbjct: 216 GRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRRDVVTWNAMISGYAQ 275

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
           HG   + L +FD M ++G +P+ +TFV VL AC++ G  + G  YF SM  +YG+    +
Sbjct: 276 HGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDLGVKYFHSMAKDYGLVAKPD 335

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDF 642
           HYT MV LLGRAG L +A  LIE +PF+P   ++  LLGAC IH N E+   ++Q +L+ 
Sbjct: 336 HYTCMVDLLGRAGKLVEAVDLIEKMPFKPHAAVFGTLLGACRIHKNTEMAEFASQKLLNL 395

Query: 643 EPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTS 691
           +P     +V L+N+YA  + W+  A            K PG SWIE + M H FR+GD  
Sbjct: 396 DPASATGYVQLANVYAATKRWDHVARVRKSMKSCKVVKTPGYSWIEVKSMAHQFRSGDKF 455

Query: 692 HADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMP 751
           H ++  I G L+ L  K + AGY+PDL   L DV E++KE+ L  HSEKLA+A+ L K+P
Sbjct: 456 HPELASIHGKLKELEKKMKLAGYVPDLEFALHDVGEEQKEQLLLWHSEKLAIAYGLIKLP 515

Query: 752 PSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           P +PIR+ KNLR+C DCH AIK IS+I +REII+RD  RFHHF+DG CSC D+W
Sbjct: 516 PGTPIRVFKNLRVCGDCHRAIKYISQIERREIIVRDTTRFHHFKDGHCSCADYW 569



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 74/226 (32%), Positives = 121/226 (53%), Gaps = 1/226 (0%)

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
            A++  Y K G I  A R+FE+MP+K+++ W+ MIA Y +   + D V+LF  M    + 
Sbjct: 135 TAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQ 194

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           PN  T  S L  C+ +  L LG Q+H LV +  L  D     +L+ +Y KCG +E+  +L
Sbjct: 195 PNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKL 254

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F + P+R+ VTWN MI GY Q GE  KA+ +F +M+E+ +    +T+ +VL AC      
Sbjct: 255 FVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFT 314

Query: 461 EPGMQ-VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMM 505
           + G++  H +               ++D+  + G + +A  + + M
Sbjct: 315 DLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKM 360



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 88/375 (23%), Positives = 167/375 (44%), Gaps = 25/375 (6%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D  + N +L+ YV+ + +  A   F++MP ++T S+ T I G+  + Q  +A  LF  + 
Sbjct: 37  DAVSYNTMLSCYVRNSNMERAQAFFEDMPIKDTPSWNTMITGFAQNQQMDKARDLFLIMP 96

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
            +    N   + A +   V  G  +    +F    +     +    TA+I  +   G + 
Sbjct: 97  TK----NVVTWNAMISGYVECGDLDSALKLF----EKAPFKSVVAWTAMITGYMKLGRIG 148

Query: 210 FARKVFDGLF----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL 253
            A ++F+ +                 N   E+ +  F  M   G +PN+ T +  L  C 
Sbjct: 149 LAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCS 208

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSF 313
            L  +++ +  H    K+    D     +L+ +Y K G + +  ++F ++P++DV+ W+ 
Sbjct: 209 ELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRRDVVTWNA 268

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRV 372
           MI+ YAQ      A+ LF  M +  + P+  TFV+VL AC      DLG    HS+    
Sbjct: 269 MISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDLGVKYFHSMAKDY 328

Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMF 432
           GL++       ++D+  + G++  +V+L  + P + H      ++G  ++ +  +     
Sbjct: 329 GLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFKPHAAVFGTLLGACRIHKNTEMAEFA 388

Query: 433 SKMLEEQVPATEVTY 447
           S+ L    PA+   Y
Sbjct: 389 SQKLLNLDPASATGY 403



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 125/282 (44%), Gaps = 33/282 (11%)

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
           L + V  ++ L  +  K G+++ + ELF + P+ + V++NTM+  YV+   + +A   F 
Sbjct: 3   LKTTVTWNSVLAGMSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAFFE 62

Query: 434 KMLEEQVPATE---------------------------VTYSSVLRACASLAALEPGMQV 466
            M  +  P+                             VT+++++        L+  ++ 
Sbjct: 63  DMPIKDTPSWNTMITGFAQNQQMDKARDLFLIMPTKNVVTWNAMISGYVECGDLDSALK- 121

Query: 467 HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLS 526
             L  KA +   VV   A+I  Y K G I  A  +F+ M + N V+WNAMI+GY  +  +
Sbjct: 122 --LFEKAPFK-SVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRA 178

Query: 527 AEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTS 586
            + +K+F  M   G +PN+ T    L  CS    L+ G    + +V    +       TS
Sbjct: 179 EDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQ-LVCKSPLCDDTTAGTS 237

Query: 587 MVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
           ++S+  + G L+   KL   +P +  V+ W A++     H  
Sbjct: 238 LISMYCKCGVLEDGWKLFVQVP-RRDVVTWNAMISGYAQHGE 278



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 116/263 (44%), Gaps = 33/263 (12%)

Query: 67  IQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFV 126
           ++  DL +A+    ++ +K     + A   ++  Y+KL R+  A +LF++MPE+N +++ 
Sbjct: 111 VECGDLDSAL----KLFEKAPFKSVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWN 166

Query: 127 TTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKL 186
             I GY  + +  + V LF T+   G + N    ++ L     +   +L   V   V K 
Sbjct: 167 AMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKS 226

Query: 187 GHDSNAFVGTALIDAFSVCGCVEFARKVF-----------DGLFNDCFE-----EALNFF 230
               +   GT+LI  +  CG +E   K+F           + + +   +     +AL  F
Sbjct: 227 PLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLF 286

Query: 231 SQMRAVGFKPNNFTFAFVLKAC-------LGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
            +M   G KP+  TF  VL AC       LG+         +G   K     D Y    +
Sbjct: 287 DEMIEKGMKPDWITFVAVLMACNHAGFTDLGVKYFHSMAKDYGLVAKP----DHY--TCM 340

Query: 284 LDLYTKSGEISNARRIFEEMPKK 306
           +DL  ++G++  A  + E+MP K
Sbjct: 341 VDLLGRAGKLVEAVDLIEKMPFK 363



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 19/199 (9%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           NS + +++L  C +   LQ    +H  V K   C D  A   L+++Y K   L D  KLF
Sbjct: 196 NSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLF 255

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
            ++P R+ +++   I GY    +  +A+GLF  +  +G + +   F A L      G+ +
Sbjct: 256 VQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFTD 315

Query: 175 LCPCVFACVYK-LGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQM 233
           L    F  + K  G  +     T ++D     G +                EA++   +M
Sbjct: 316 LGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKL---------------VEAVDLIEKM 360

Query: 234 RAVGFKPNNFTFAFVLKAC 252
               FKP+   F  +L AC
Sbjct: 361 P---FKPHAAVFGTLLGAC 376


>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1217

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 238/642 (37%), Positives = 341/642 (53%), Gaps = 63/642 (9%)

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMR 234
           N+ +G  L+ A++    V  ARKVFD +                 N  + E +  F  M 
Sbjct: 74  NSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTMC 133

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
           +   KP+++TF  VLKAC     I + K  HG A K      L+V   L+ +Y K G +S
Sbjct: 134 SCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLS 193

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
            AR + +EM ++DV+ W+ ++A YAQ     DA+E+   M    ++ +  T  S+L A  
Sbjct: 194 EARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA-- 251

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
                               +S+    N +   Y K        ++F +  K++ V+WN 
Sbjct: 252 --------------------VSNTTTENVM---YVK--------DMFFKMGKKSLVSWNV 280

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
           MI  Y++     +A+ ++S M  +      V+ +SVL AC   +AL  G ++H    +  
Sbjct: 281 MIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKK 340

Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
              ++++ NALIDMYAKCG +  AR VF+ M   + VSW AMIS Y   G   + + +F 
Sbjct: 341 LIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFS 400

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
            MQ  G  P+++ FV  L+ACS+ GLLE+G + FK M  +Y I P +EH   MV LLGRA
Sbjct: 401 KMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRA 460

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLS 654
           G + +A K I+ +P +P+  +W ALLGAC +H+N +IG L+A  +    PE    +VLLS
Sbjct: 461 GKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGYYVLLS 520

Query: 655 NIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLE 703
           NIYA A  WE           K   K PG S +E   ++H F  GD SH     I   L+
Sbjct: 521 NIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSAEIYRELD 580

Query: 704 WLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMP---PSSPIRIIK 760
            L  K ++ GY+PD  + L DV E++KE +L VHSEKLA+ FAL        ++ IRI K
Sbjct: 581 VLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTEEEDSNNAIRITK 640

Query: 761 NLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCG 802
           NLRIC DCH A K+IS+I  REIIIRD +RFH F+ G CSC 
Sbjct: 641 NLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCA 682



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 117/456 (25%), Positives = 209/456 (45%), Gaps = 21/456 (4%)

Query: 71  DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQ 130
           DL+T  T+H +++ +    +      L+  Y  L  +  A K+FDE+PERN I     I+
Sbjct: 55  DLKTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIR 114

Query: 131 GYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDS 190
            Y  +  + E + +F T+     + + + F   LK     G   +   +     K+G  S
Sbjct: 115 SYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSS 174

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLK 250
             FVG  L+  +  CG +  AR V D +         +  S    V     N  F   L+
Sbjct: 175 TLFVGNGLVSMYGKCGFLSEARLVLDEM------SRRDVVSWNSLVAGYAQNQRFDDALE 228

Query: 251 ACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIP 310
            C  +++++++  A   A        L  AV+     T +  +   + +F +M KK ++ 
Sbjct: 229 VCREMESVKISHDAGTMA-------SLLPAVS----NTTTENVMYVKDMFFKMGKKSLVS 277

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV 370
           W+ MI  Y +  + ++AVEL+  M      P+  +  SVL AC     L LG +IH  + 
Sbjct: 278 WNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIE 337

Query: 371 RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMI 430
           R  L+ ++ + NAL+D+YAKCG ++ + ++F     R+ V+W  MI  Y   G    A+ 
Sbjct: 338 RKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVA 397

Query: 431 MFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDM 488
           +FSKM +  +    + + + L AC+    LE G     L    +Y +   + +   ++D+
Sbjct: 398 LFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTD-HYKITPRLEHLACMVDL 456

Query: 489 YAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
             + G + +A + + +M  + NE  W A++    +H
Sbjct: 457 LGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVH 492



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/384 (24%), Positives = 174/384 (45%), Gaps = 38/384 (9%)

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
           K   F    VL     L T+R   + H   +      +  + V L+  Y    +++ AR+
Sbjct: 40  KETAFMLGQVLDTYPDLKTLR---TVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARK 96

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           +F+E+P+++VI  + MI  Y       + +++F  M    V P+ +TF  VL+AC+    
Sbjct: 97  VFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGN 156

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           + +G +IH    +VGL S +FV N L+ +Y KCG +  +  +  E  +R+ V+WN+++ G
Sbjct: 157 IVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAG 216

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           Y Q      A+ +  +M   ++     T +S+L A ++             T   N    
Sbjct: 217 YAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSN-------------TTTENV--- 260

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
                    MY K         +F  M   + VSWN MI  Y  + +  E ++++  M+ 
Sbjct: 261 ---------MYVKD--------MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEA 303

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLD 598
            G+ P+ ++   VL AC +   L  G+      +    + P +    +++ +  + G LD
Sbjct: 304 DGFEPDAVSITSVLPACGDTSALSLGKK-IHGYIERKKLIPNLLLENALIDMYAKCGCLD 362

Query: 599 KAAKLIEGIPFQPSVMIWRALLGA 622
           +A  + E +  +  V+ W A++ A
Sbjct: 363 RARDVFENMKSR-DVVSWTAMISA 385



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 168/369 (45%), Gaps = 29/369 (7%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           + +++   L++C  + ++     IH    K G    LF  N L+++Y K   L +A  + 
Sbjct: 140 DHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVL 199

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFT-AFLKVLVSMGWA 173
           DEM  R+ +S+ + + GY  + +F +A+ +   +  E  +++  A T A L   VS    
Sbjct: 200 DEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREM--ESVKISHDAGTMASLLPAVSNTTT 257

Query: 174 ELCPCVFACVYKLGHDS----NAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNF 229
           E    V    +K+G  S    N  +G  + +A  V                    EA+  
Sbjct: 258 ENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPV--------------------EAVEL 297

Query: 230 FSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK 289
           +S M A GF+P+  +   VL AC     + + K  HG   +     +L +  AL+D+Y K
Sbjct: 298 YSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAK 357

Query: 290 SGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSV 349
            G +  AR +FE M  +DV+ W+ MI+ Y  +    DAV LF +M+ + + P+   FV+ 
Sbjct: 358 CGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTT 417

Query: 350 LQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALM-DVYAKCGRMENSVELFAESP-KR 407
           L AC+    L+ G     L+     ++      A M D+  + G+++ + +   E P + 
Sbjct: 418 LAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEP 477

Query: 408 NHVTWNTMI 416
           N   W  ++
Sbjct: 478 NERVWGALL 486



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 136/297 (45%), Gaps = 7/297 (2%)

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
           +P +  F+ + Q   T   L     +HS ++   L  +  +   LM  YA    +  + +
Sbjct: 38  SPKETAFM-LGQVLDTYPDLKTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARK 96

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +F E P+RN +  N MI  YV  G   + + +F  M    V     T+  VL+AC+    
Sbjct: 97  VFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGN 156

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
           +  G ++H    K      + V N L+ MY KCG +++ARLV D M+  + VSWN++++G
Sbjct: 157 IVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAG 216

Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
           Y+ +    + L+V   M+      +  T   +L A SN     +   Y K M    G + 
Sbjct: 217 YAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSN--TTTENVMYVKDMFFKMGKKS 274

Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIP---FQPSVMIWRALLGACIIHNNVEIGR 633
            +  +  M+ +  +     +A +L  G+    F+P  +   ++L AC   + + +G+
Sbjct: 275 LVS-WNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGK 330



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 104/253 (41%), Gaps = 23/253 (9%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E ++ S  + L +C     L     IH  + +K    +L   N L+++Y K   L  A  
Sbjct: 307 EPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARD 366

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +F+ M  R+ +S+   I  Y  S +  +AV LFS +   G  L P +  AF+  L +   
Sbjct: 367 VFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSG--LVPDSI-AFVTTLAACSH 423

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN-DCFEEALNFFS 231
           A L     +C +KL           + D + +   +E    + D L      +EA  F  
Sbjct: 424 AGLLEEGRSC-FKL-----------MTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQ 471

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
           +M     +PN   +  +L AC       +   A     +   E   Y  V L ++Y K+G
Sbjct: 472 EM---PMEPNERVWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGYY-VLLSNIYAKAG 527

Query: 292 ---EISNARRIFE 301
              E++N R I +
Sbjct: 528 RWEEVTNIRNIMK 540


>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 833

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 232/664 (34%), Positives = 377/664 (56%), Gaps = 32/664 (4%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           + + H++   L+ C  + D+   M +H  V K G   D++  N LL +Y     L DA +
Sbjct: 156 QLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARR 215

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGL-FSTLHREGHELNPFAFTAFLKVLVSMG 171
           LFDEMPER+ +S+ T I   +V+  + EA    F  + R   + N  +  + L +  ++ 
Sbjct: 216 LFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALE 275

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--------------- 216
             E+   +     K+G DS      AL+DA+  CG V+   +VF+               
Sbjct: 276 DEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIIN 335

Query: 217 GLF--NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
           GL     C++ ALN F  M   G +PN+ T + +L   + L+  +  K  HG +++   E
Sbjct: 336 GLACKGRCWD-ALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTE 394

Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
            D+++A +L+D+Y KSG  + A  IF  + +++++ W+ MIA YA   L ++A+    +M
Sbjct: 395 TDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQM 454

Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
           ++    PN  TF +VL ACA +  L  G +IH++ VR+GL SD+FVSN+L+D+YAKCG +
Sbjct: 455 QETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCL 514

Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
            ++  +F  S +++ V++N +I+GY +  +  +++ +FS+M         V++  V+ AC
Sbjct: 515 HSARNVFNTS-RKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISAC 573

Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
           A+LAAL+ G +VH + ++ +    + V+N+L+D Y KCG I  A  +F+ +   +  SWN
Sbjct: 574 ANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWN 633

Query: 515 AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
            MI GY M G     + +F+ M+    + + ++++ VLSACS+GGL+E+G  YF  M+A 
Sbjct: 634 TMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQ 693

Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL 634
             +EP   HYT MV LLGRAG +++AAKLI+ +P  P   IW ALLGAC I+ NVE+GR 
Sbjct: 694 R-LEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGNVELGRR 752

Query: 635 SAQHILDFEPEDEATHVLLSNIYAMARSWEKA-----------ASKEPGLSWIENQGMVH 683
           +A+H+ + +P+    ++LLSNIYA    W++A           A K PG SW++    VH
Sbjct: 753 AAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSWVQIYDQVH 812

Query: 684 YFRA 687
            F A
Sbjct: 813 AFVA 816



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/410 (32%), Positives = 215/410 (52%), Gaps = 16/410 (3%)

Query: 192 AFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKA 251
           AF+   LI A S+          ++G F D FE     +++M   G + ++ TF FVLK 
Sbjct: 123 AFLWNTLIRAHSI---------AWNGTF-DGFET----YNRMVRRGVQLDDHTFPFVLKL 168

Query: 252 CLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPW 311
           C     I      HG   K  ++ D+YV   LL LY   G +++ARR+F+EMP++DV+ W
Sbjct: 169 CSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSW 228

Query: 312 SFMIARYA-QTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV 370
           + +I   +   D +      F  + ++ + PN  + +S+L   A +E  ++  +IH   V
Sbjct: 229 NTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSV 288

Query: 371 RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMI 430
           +VGL S V   NAL+D Y KCG ++   ++F E+ ++N V+WN++I G    G    A+ 
Sbjct: 289 KVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALN 348

Query: 431 MFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYA 490
            F  M++       VT SS+L     L   + G ++H  +++   + D+ +AN+LIDMYA
Sbjct: 349 AFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYA 408

Query: 491 KCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVG 550
           K G  T+A  +F  ++  N VSWNAMI+ Y+++ L  E ++    MQ+ G  PN +TF  
Sbjct: 409 KSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTN 468

Query: 551 VLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKA 600
           VL AC+  G L  G+    +M    G+   +    S++ +  + G L  A
Sbjct: 469 VLPACARLGFLGPGKE-IHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSA 517



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 106/214 (49%), Gaps = 5/214 (2%)

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLS-DVFVSNALMDVYAKCGRMENSVELFA 402
           +  +++L  C+ ++ L    Q+H+L +  G L   V +  +L+  YAK     +   LF 
Sbjct: 55  YIHINLLTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFN 114

Query: 403 ESPK--RNHVTWNTMIVGY-VQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           ++ +  R    WNT+I  + +           +++M+   V   + T+  VL+ C+    
Sbjct: 115 QTFQNCRTAFLWNTLIRAHSIAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLCSDSFD 174

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
           +  GM+VH +  K  +D DV V N L+ +Y  CG + DAR +FD M + + VSWN +I  
Sbjct: 175 ICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGL 234

Query: 520 YSMHGLSAEVLKVFDLMQQRG-WRPNNLTFVGVL 552
            S++G   E    +  M  R   +PN ++ + +L
Sbjct: 235 LSVNGDYTEARNYYFWMILRSVIKPNLVSVISLL 268


>gi|297739965|emb|CBI30147.3| unnamed protein product [Vitis vinifera]
          Length = 538

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 213/509 (41%), Positives = 313/509 (61%), Gaps = 19/509 (3%)

Query: 311 WSFMIARYAQTDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
           W+ MI  Y+++D   +A+ L+  M  +    PN FTF  +L +CA +  L+ G+++HS +
Sbjct: 2   WNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHI 61

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAM 429
           ++ G  SD+FV NAL+ +Y+  G +  +  LF ES  R+ V++NTMI GY ++ +   A+
Sbjct: 62  IKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESAL 121

Query: 430 IMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV-HCLTVKANYDMDVVVANALIDM 488
            +F +M      + EVT  +VL ACA L A + G ++ H       ++ + ++  A++DM
Sbjct: 122 CLFGEMQN----SDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDM 177

Query: 489 YAKCGSITDARLVFDMM--NDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNL 546
           YAKCGSI  A  +F  +  N      +N+MI+G + HGL    + VF  +   G +P+ +
Sbjct: 178 YAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEV 237

Query: 547 TFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEG 606
           TFVGVL AC + GL+E+G+  F+SM   YGI+P +EHY  MV LLGR G L++A  L++ 
Sbjct: 238 TFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQK 297

Query: 607 IPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKA 666
           +PF+ + +IWRALL AC  H NV+IG ++ Q +L+ E +  A +VLLSNI A A  WE+A
Sbjct: 298 MPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEA 357

Query: 667 AS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYI 715
                        K PG S+IE  G +H F A D SH     I  ML+ + M+ + AGY+
Sbjct: 358 RQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAGYV 417

Query: 716 PDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKII 775
           P+ + V+ D+ E+EKE  +  HSEKLALAF L    P+  IRI+KNLRIC DCH A K++
Sbjct: 418 PNTAQVMFDIDEEEKESVVSYHSEKLALAFGLMYCSPTDTIRIVKNLRICADCHKAFKLV 477

Query: 776 SKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
           S+I  REI +RD  RFHHF++G CSC DF
Sbjct: 478 SEIYGREITVRDTMRFHHFRNGSCSCMDF 506



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 166/312 (53%), Gaps = 12/312 (3%)

Query: 220 NDCFEEALNFFSQMRAVGF-KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
           +D   EA+  +  M A G   PNNFTF F+L +C  L ++      H   +K  +E DL+
Sbjct: 12  SDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFESDLF 71

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V  AL+ LY+  G ++ AR +F+E   +D++ ++ MI  YA+ +    A+ LF  M+ + 
Sbjct: 72  VRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNS- 130

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLS-DVFVSNALMDVYAKCGRMENS 397
              ++ T V+VL ACA +   DLG +++   +  G+ + +  ++ A+MD+YAKCG ++++
Sbjct: 131 ---DEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSA 187

Query: 398 VELFAESPK--RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
           +E+F    K  +    +N+MI G  Q G    A+ +F +++   +   EVT+  VL AC 
Sbjct: 188 LEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACG 247

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVS 512
               +E G ++      A Y +   + +   ++D+  + G + +A  LV  M  + N V 
Sbjct: 248 HSGLIEEGKKLFESMFNA-YGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVI 306

Query: 513 WNAMISGYSMHG 524
           W A++S    HG
Sbjct: 307 WRALLSACRTHG 318



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/297 (23%), Positives = 129/297 (43%), Gaps = 37/297 (12%)

Query: 47  ITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNR 106
           I   ++  N+ ++   L SC +   L+    +H  ++K G   DLF  N L+++Y     
Sbjct: 26  IAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGN 85

Query: 107 LPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV 166
           L  A  LFDE   R+ +S+ T I+GY   +Q   A+ LF  +       +     A L  
Sbjct: 86  LNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNS----DEVTLVAVLSA 141

Query: 167 LVSMGWAELCPCVFACVYKLG-HDSNAFVGTALIDAFSVCGCVEFARKVFDG-------- 217
              +G  +L   ++    + G  + N  +  A++D ++ CG ++ A ++F          
Sbjct: 142 CARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTG 201

Query: 218 -LFNDCF---------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAK----- 262
            +FN            E A+  F ++ + G KP+  TF  VL AC     I   K     
Sbjct: 202 FVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFES 261

Query: 263 --SAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
             +A+G       +M+ Y    ++DL  + G +  A  + ++MP + + + W  +++
Sbjct: 262 MFNAYGIKP----QMEHY--GCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLS 312


>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 212/534 (39%), Positives = 310/534 (58%), Gaps = 19/534 (3%)

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           +L  Y +S  +  A   F +MP KD+  W+ +I+ +AQ      A +LF  M +     N
Sbjct: 142 MLVCYLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEK----N 197

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
             ++ +++        L+   +++     VG+ S V V  A++  Y K G++E +  +F 
Sbjct: 198 GVSWSAMISGYVEHGDLEAAEELYK---NVGMKS-VVVETAMLTGYMKFGKVELAERIFQ 253

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
               +N VTWN+MI GYV+       + +F  M+E +V    ++ SSVL  C++L+AL  
Sbjct: 254 RMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPL 313

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G Q+H L  K+    D     +LI MY KCG +  A  +F  M   + +SWNAMISGY+ 
Sbjct: 314 GRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQ 373

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
           HG   + L +FD M+    +P+ +TFV V+ AC++ G ++ G  YFKSM   +GIE    
Sbjct: 374 HGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPV 433

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDF 642
           HYT ++ LLGRAG LD+A  LI+ +PF+P   I+  LLGAC IH N+++   +A+++L+ 
Sbjct: 434 HYTCVIDLLGRAGRLDEAVSLIKEMPFKPHAAIYGTLLGACRIHKNLDLAEFAARNLLNL 493

Query: 643 EPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTS 691
           +P     +V L+NIYA    W++ A            K PG SWIE + + H FR+ D  
Sbjct: 494 DPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRL 553

Query: 692 HADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMP 751
           H ++  I   L  L+ K + AGY+PDL   L DV E+ KE+ L  HSEKLA+AF L K  
Sbjct: 554 HPELTSIHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTA 613

Query: 752 PSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           P +PIR+ KNLR+C DCH AIK IS I +REII+RD  RFHHF++G CSCGD+W
Sbjct: 614 PGTPIRVFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 195/412 (47%), Gaps = 35/412 (8%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYT-VSSQFVEAVGLFSTL 148
           D+ + N  +  +V+   L  A  +F++M  R T+++ T + GYT V+ +  EA  LF  +
Sbjct: 72  DVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKI 131

Query: 149 HREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCV 208
                         +L+   S G         A   K+     A   T LI  F+  G +
Sbjct: 132 PEPDSVSYNIMLVCYLR---SYG----VEAALAFFNKMPVKDIASWNT-LISGFAQNGQM 183

Query: 209 EFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCA 268
           +   K FD LF+   E+    +S M +   +  +   A  L   +G+ ++          
Sbjct: 184 Q---KAFD-LFSVMPEKNGVSWSAMISGYVEHGDLEAAEELYKNVGMKSV---------- 229

Query: 269 LKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAV 328
                     V  A+L  Y K G++  A RIF+ M  K+++ W+ MIA Y +   + D +
Sbjct: 230 ---------VVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGL 280

Query: 329 ELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVY 388
           ++F  M ++ V PN  +  SVL  C+ +  L LG Q+H LV +  L  D     +L+ +Y
Sbjct: 281 KVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMY 340

Query: 389 AKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYS 448
            KCG ++++ +LF E P+++ ++WN MI GY Q G   KA+ +F KM    +    +T+ 
Sbjct: 341 CKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFV 400

Query: 449 SVLRACASLAALEPGMQVHCLTVKANYDMDV--VVANALIDMYAKCGSITDA 498
           +V+ AC     ++ G+Q +  ++K  + ++   V    +ID+  + G + +A
Sbjct: 401 AVILACNHAGFVDLGVQ-YFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEA 451



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 161/346 (46%), Gaps = 25/346 (7%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D  + N++L  Y++   +  A   F++MP ++  S+ T I G+  + Q  +A  LFS + 
Sbjct: 135 DSVSYNIMLVCYLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMP 194

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
               E N  +++A +   V  G  E    ++  V   G  S   V TA++  +   G VE
Sbjct: 195 ----EKNGVSWSAMISGYVEHGDLEAAEELYKNV---GMKS-VVVETAMLTGYMKFGKVE 246

Query: 210 FARKVFD---------------GLFNDC-FEEALNFFSQMRAVGFKPNNFTFAFVLKACL 253
            A ++F                G   +C  E+ L  F  M     +PN  + + VL  C 
Sbjct: 247 LAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCS 306

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSF 313
            L  + + +  H    K+    D     +L+ +Y K G++ +A ++F EMP+KDVI W+ 
Sbjct: 307 NLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNA 366

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ-IHSLVVRV 372
           MI+ YAQ      A+ LF +MR   + P+  TFV+V+ AC     +DLG Q   S+    
Sbjct: 367 MISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEF 426

Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           G+ +       ++D+  + GR++ +V L  E P + H      ++G
Sbjct: 427 GIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFKPHAAIYGTLLG 472



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 162/357 (45%), Gaps = 56/357 (15%)

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSI-DAVELFCRMRQAFVAPNQFT 345
           + ++ ++ +AR +FE+M  +  + W+ M++ Y +    + +A ELF ++ +    P+  +
Sbjct: 83  FVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKIPE----PDSVS 138

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           +                                   N ++  Y +   +E ++  F + P
Sbjct: 139 Y-----------------------------------NIMLVCYLRSYGVEAALAFFNKMP 163

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
            ++  +WNT+I G+ Q G++ KA  +FS M E+      V++S+++        LE   +
Sbjct: 164 VKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKN----GVSWSAMISGYVEHGDLEAAEE 219

Query: 466 VHCLTVKANYDM-DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
           ++      N  M  VVV  A++  Y K G +  A  +F  M   N V+WN+MI+GY  + 
Sbjct: 220 LY-----KNVGMKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENC 274

Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY 584
            + + LKVF  M +   RPN L+   VL  CSN   L  G      +V+   +       
Sbjct: 275 RAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQ-MHQLVSKSPLSKDTTAC 333

Query: 585 TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
           TS++S+  + G LD A KL   +P +  V+ W A++     H     GR  A H+ D
Sbjct: 334 TSLISMYCKCGDLDSAWKLFLEMP-RKDVISWNAMISGYAQHG---AGR-KALHLFD 385



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 79/156 (50%), Gaps = 9/156 (5%)

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL-GEVGKA 428
           + V   SDV   N  +  + +   +E++  +F +   R  VTWNTM+ GY ++ G+V +A
Sbjct: 65  LHVDTASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEA 124

Query: 429 MIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDM 488
             +F K+ E    +  +     LR+    AAL      + + VK     D+   N LI  
Sbjct: 125 HELFDKIPEPDSVSYNIMLVCYLRSYGVEAALA---FFNKMPVK-----DIASWNTLISG 176

Query: 489 YAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
           +A+ G +  A  +F +M + N VSW+AMISGY  HG
Sbjct: 177 FAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYVEHG 212



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 11/154 (7%)

Query: 478 DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS-MHGLSAEVLKVFDLM 536
           DVV  N  I  + +   +  AR VF+ M+    V+WN M+SGY+ + G   E  ++FD +
Sbjct: 72  DVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKI 131

Query: 537 QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGH 596
            +    P+++++  +L        +E   A+F  M         I  + +++S   + G 
Sbjct: 132 PE----PDSVSYNIMLVCYLRSYGVEAALAFFNKMPVK-----DIASWNTLISGFAQNGQ 182

Query: 597 LDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
           + KA  L   +P +  V  W A++   + H ++E
Sbjct: 183 MQKAFDLFSVMPEKNGVS-WSAMISGYVEHGDLE 215



 Score = 47.4 bits (111), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 78/199 (39%), Gaps = 19/199 (9%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  S ++ L  C     L     +H  V K     D  A   L+++Y K   L  A KLF
Sbjct: 294 NPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLF 353

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
            EMP ++ IS+   I GY       +A+ LF  +     + +   F A +      G+ +
Sbjct: 354 LEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVD 413

Query: 175 LCPCVFACVYK-LGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQM 233
           L    F  + K  G ++     T +ID     G +               +EA++   +M
Sbjct: 414 LGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRL---------------DEAVSLIKEM 458

Query: 234 RAVGFKPNNFTFAFVLKAC 252
               FKP+   +  +L AC
Sbjct: 459 ---PFKPHAAIYGTLLGAC 474


>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
          Length = 830

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 221/587 (37%), Positives = 325/587 (55%), Gaps = 23/587 (3%)

Query: 240 PNNFTF-AFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
           P   T+ + +L A    DT   A           +  D +++  L++ Y     +  AR+
Sbjct: 246 PTQRTYESLLLAAARARDTALAAAVHRRLEADPVFRSDPFLSTRLIEAYAALSALPAARQ 305

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           +F+E P K++  W+ M+   A  D   +A+     M +  V  + +++   L+AC     
Sbjct: 306 VFDEAPVKNIFVWNAMLKALALADHGEEALTCLADMGRLGVPVDSYSYAHGLKACIAASA 365

Query: 359 LDLG-----NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
             L       ++H+  +R G      V+  L+D YAK G +  +  +F   P RN V+W+
Sbjct: 366 SHLPASARVREMHAHAIRRGYGLHTHVATTLIDCYAKLGIVSYAERVFTSMPDRNLVSWS 425

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQ---VPATEVTYSSVLRACASLAALEPGMQVHCLT 470
            MI  Y +    G A+ +F +M+      VP   +T  SVL ACA + AL  G  +H   
Sbjct: 426 AMIGCYAKNERPGDAIQIFQEMMASDADLVP-NSITIVSVLHACAGVNALGQGKVLHAYI 484

Query: 471 VKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDW-NEVSWNAMISGYSMHGLSAEV 529
           ++  +D+ V V NAL+ MY KCG +   R +F+ +    N VSWN++ISGY MHG   E 
Sbjct: 485 LRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWIGRRRNVVSWNSLISGYGMHGFGRES 544

Query: 530 LKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVS 589
           L+VF+ M + G  PN +TFV VL ACS+ GL+EQG+  F+SMV  Y + P  EHY  MV 
Sbjct: 545 LQVFEEMIEEGISPNIITFVSVLGACSHVGLVEQGKKLFESMV-EYNVTPRAEHYACMVD 603

Query: 590 LLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEAT 649
           LLGRAG LD+A +LI+ +  QPS  +W +LLGAC IH +VE   ++  H+ D EP +   
Sbjct: 604 LLGRAGRLDEAVELIQSMRIQPSPQVWGSLLGACRIHGHVEYAEMACSHLFDLEPRNAGN 663

Query: 650 HVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNII 698
           +VLL++IYA A+             E A  K PG SWIE +  ++ F + D  +  +  +
Sbjct: 664 YVLLADIYARAKLQNQVDVLKELLEEHALEKVPGCSWIEVKKKLYSFVSVDNKNPQVEEL 723

Query: 699 RGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRI 758
           + ++     + +  GY+PD  +VL D+ E+EKER L  HSEKLA+AF L K      IRI
Sbjct: 724 QALIGEFVTQMKNEGYVPDTRSVLYDIEEEEKERILLGHSEKLAVAFGLIKTGSGEAIRI 783

Query: 759 IKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            KNLR+C DCH+  K ISK   REI++RDV+RFHHF++G CSC D+W
Sbjct: 784 TKNLRLCEDCHSVTKFISKFTDREIVVRDVNRFHHFRNGVCSCRDYW 830



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 88/371 (23%), Positives = 173/371 (46%), Gaps = 38/371 (10%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D F +  L+  Y  L+ LP A ++FDE P +N   +   ++   ++    EA+   + + 
Sbjct: 283 DPFLSTRLIEAYAALSALPAARQVFDEAPVKNIFVWNAMLKALALADHGEEALTCLADMG 342

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPC-----VFACVYKLGHDSNAFVGTALIDAFSV 204
           R G  ++ +++   LK  ++   + L        + A   + G+  +  V T LID ++ 
Sbjct: 343 RLGVPVDSYSYAHGLKACIAASASHLPASARVREMHAHAIRRGYGLHTHVATTLIDCYAK 402

Query: 205 CGCVEFARKVFDGLFN----------DCFE------EALNFFSQMRA--VGFKPNNFTFA 246
            G V +A +VF  + +           C+       +A+  F +M A      PN+ T  
Sbjct: 403 LGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASDADLVPNSITIV 462

Query: 247 FVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM-PK 305
            VL AC G++ +   K  H   L+  +++ + V  AL+ +Y K G +   R IF  +  +
Sbjct: 463 SVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWIGRR 522

Query: 306 KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
           ++V+ W+ +I+ Y       +++++F  M +  ++PN  TFVSVL AC+ +  ++ G ++
Sbjct: 523 RNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVSVLGACSHVGLVEQGKKL 582

Query: 366 HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE-----SPKRNHVTWNTM----- 415
              +V   +         ++D+  + GR++ +VEL        SP+     W ++     
Sbjct: 583 FESMVEYNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRIQPSPQ----VWGSLLGACR 638

Query: 416 IVGYVQLGEVG 426
           I G+V+  E+ 
Sbjct: 639 IHGHVEYAEMA 649



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 151/386 (39%), Gaps = 86/386 (22%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMT-----IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD 109
           +S+SYA  L++CI         +     +H   +++G  L       L++ Y KL  +  
Sbjct: 349 DSYSYAHGLKACIAASASHLPASARVREMHAHAIRRGYGLHTHVATTLIDCYAKLGIVSY 408

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFT--AFLKVL 167
           A ++F  MP+RN +S+   I  Y  + +  +A+ +F  +     +L P + T  + L   
Sbjct: 409 AERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASDADLVPNSITIVSVLHAC 468

Query: 168 VSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL--------- 218
             +        + A + + G D    V  AL+  +  CGC+E  R +F+ +         
Sbjct: 469 AGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWIGRRRNVVSW 528

Query: 219 --------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALK 270
                    +    E+L  F +M   G  PN  TF  VL AC                  
Sbjct: 529 NSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVSVLGAC------------------ 570

Query: 271 TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIP----WSFMIARYAQTDLSID 326
                            +  G +   +++FE M + +V P    ++ M+    +     +
Sbjct: 571 -----------------SHVGLVEQGKKLFESMVEYNVTPRAEHYACMVDLLGRAGRLDE 613

Query: 327 AVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL----LSDVFVSN 382
           AVEL   MR   + P+   + S+L AC          +IH  V    +    L D+   N
Sbjct: 614 AVELIQSMR---IQPSPQVWGSLLGAC----------RIHGHVEYAEMACSHLFDLEPRN 660

Query: 383 A-----LMDVYAKCGRMENSVELFAE 403
           A     L D+YA+  +++N V++  E
Sbjct: 661 AGNYVLLADIYAR-AKLQNQVDVLKE 685


>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
 gi|194705708|gb|ACF86938.1| unknown [Zea mays]
 gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
          Length = 635

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 210/527 (39%), Positives = 314/527 (59%), Gaps = 14/527 (2%)

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ---AFVAPNQFTFVSV 349
           +++AR +F+ MP++D   WS +++ + +      A+ ++ RM +      A N+FT  S 
Sbjct: 109 LASARALFDRMPRRDHFSWSAIVSAHVRHGQPRAALAIYRRMLREPGGSGADNEFTASSA 168

Query: 350 LQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNH 409
           L A         G ++H  VVR G+ +D  V +AL D+YAK GR++++  +F   P R+ 
Sbjct: 169 LAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDV 228

Query: 410 VTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCL 469
           V+W  M+  Y   G  G+   +F +M+   +   E TY+ VLRACA   + + G QVH  
Sbjct: 229 VSWTAMLDRYFDAGRDGEGFRLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGR 288

Query: 470 TVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEV 529
             K+         +AL+ MY+K G +  A  VF  M   + VSW AMISGY+ +G   E 
Sbjct: 289 MAKSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEA 348

Query: 530 LKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVS 589
           L  FD++   G+RP+++TFVGVLSAC++ GL+++G   F S+   YGIE   +HY  ++ 
Sbjct: 349 LHCFDMLLSSGFRPDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADHYACVID 408

Query: 590 LLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEAT 649
           LL R+G  ++A  +I  +P +P+  +W +LLG C IH NV +   +A+ + + EPE+ AT
Sbjct: 409 LLSRSGLFERAEDMINTMPVKPNKFLWASLLGGCRIHKNVRLAWWAAEALFEIEPENPAT 468

Query: 650 HVLLSNIYA----------MARSWE-KAASKEPGLSWIENQGMVHYFRAGDTSHADMNII 698
           +V L+NIYA          M R+ E +  +K P  SWIE    VH F  GD SH     I
Sbjct: 469 YVTLANIYASVGLFDEVENMRRTMELRGITKMPASSWIEVGTRVHVFLVGDKSHPQAEEI 528

Query: 699 RGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRI 758
             +L+ L +K R+ GY+ D   VL DV +++K++ +  HSE+LA+AF +   P  SPI++
Sbjct: 529 YALLKKLYVKMREEGYVADTGFVLHDVEDEQKQQDIGYHSERLAVAFGIIATPKGSPIKV 588

Query: 759 IKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            KNLRIC DCHT IK+ISKIVQREII+RD +RFHHF++G CSC D+W
Sbjct: 589 FKNLRICGDCHTTIKLISKIVQREIIVRDSNRFHHFKNGSCSCRDYW 635



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 156/322 (48%), Gaps = 21/322 (6%)

Query: 261 AKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQ 320
            +  H   ++   + D  V  AL D+Y K G + +AR +F+ MP +DV+ W+ M+ RY  
Sbjct: 181 GRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVSWTAMLDRYFD 240

Query: 321 TDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFV 380
                +   LF RM ++ + PN+FT+  VL+ACA      LG Q+H  + +       F 
Sbjct: 241 AGRDGEGFRLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGRMAKSRTGDSCFA 300

Query: 381 SNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQV 440
            +AL+ +Y+K G M  ++ +F   PK + V+W  MI GY Q G+  +A+  F  +L    
Sbjct: 301 GSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEALHCFDMLLSSGF 360

Query: 441 PATEVTYSSVLRACASLAALEPGMQV-HCLTVKANYDMDVVVANALIDMYAKCGSITDAR 499
               VT+  VL ACA    ++ G+ + H +  K   +        +ID+ ++ G    A 
Sbjct: 361 RPDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADHYACVIDLLSRSGLFERAE 420

Query: 500 LVFDMMNDW----NEVSWNAMISGYSMHG------LSAEVLKVFDLMQQRGWRPNNLTFV 549
              DM+N      N+  W +++ G  +H        +AE L  F++  +     N  T+V
Sbjct: 421 ---DMINTMPVKPNKFLWASLLGGCRIHKNVRLAWWAAEAL--FEIEPE-----NPATYV 470

Query: 550 GVLSACSNGGLLEQGEAYFKSM 571
            + +  ++ GL ++ E   ++M
Sbjct: 471 TLANIYASVGLFDEVENMRRTM 492



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 175/385 (45%), Gaps = 24/385 (6%)

Query: 90  DLFATNVLLNVYVKLNR-LPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTL 148
           D+ + N L+    +  R L  A  LFD MP R+  S+   +  +    Q   A+ ++  +
Sbjct: 91  DVCSYNTLVAALGRSPRGLASARALFDRMPRRDHFSWSAIVSAHVRHGQPRAALAIYRRM 150

Query: 149 HRE---GHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVC 205
            RE       N F  ++ L    +   A     +   V + G D++A V +AL D ++  
Sbjct: 151 LREPGGSGADNEFTASSALAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKF 210

Query: 206 GCVEFARKVFD-----------GLFNDCFE-----EALNFFSQMRAVGFKPNNFTFAFVL 249
           G ++ AR VFD            + +  F+     E    F +M   G  PN FT+A VL
Sbjct: 211 GRLDDARSVFDRMPVRDVVSWTAMLDRYFDAGRDGEGFRLFVRMMRSGILPNEFTYAGVL 270

Query: 250 KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
           +AC    + ++ K  HG   K+      +   AL+ +Y+K G++  A R+F  MPK D++
Sbjct: 271 RACAEFTSEKLGKQVHGRMAKSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMPKPDLV 330

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI-HSL 368
            W+ MI+ YAQ     +A+  F  +  +   P+  TFV VL ACA    +D G  I HS+
Sbjct: 331 SWTAMISGYAQNGQPDEALHCFDMLLSSGFRPDHVTFVGVLSACAHAGLVDKGLGIFHSI 390

Query: 369 VVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMIVGYVQLGEVGK 427
             + G+         ++D+ ++ G  E + ++    P K N   W +++ G      V  
Sbjct: 391 KDKYGIEHTADHYACVIDLLSRSGLFERAEDMINTMPVKPNKFLWASLLGGCRIHKNVRL 450

Query: 428 AMIMFSKM--LEEQVPATEVTYSSV 450
           A      +  +E + PAT VT +++
Sbjct: 451 AWWAAEALFEIEPENPATYVTLANI 475



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 108/252 (42%), Gaps = 29/252 (11%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           +HC V+++G   D    + L ++Y K  RL DA  +FD MP R+ +S+   +  Y  + +
Sbjct: 184 LHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVSWTAMLDRYFDAGR 243

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
             E   LF  + R G   N F +   L+        +L   V   + K     + F G+A
Sbjct: 244 DGEGFRLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGRMAKSRTGDSCFAGSA 303

Query: 198 LIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRAVGFKPN 241
           L+  +S  G +  A +VF G+                 N   +EAL+ F  + + GF+P+
Sbjct: 304 LVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEALHCFDMLLSSGFRPD 363

Query: 242 NFTFAFVLKACL-------GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
           + TF  VL AC        GL      K  +G      +  D Y  V  +DL ++SG   
Sbjct: 364 HVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGIE----HTADHYACV--IDLLSRSGLFE 417

Query: 295 NARRIFEEMPKK 306
            A  +   MP K
Sbjct: 418 RAEDMINTMPVK 429



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 79/342 (23%), Positives = 131/342 (38%), Gaps = 44/342 (12%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +YA  L++C +    +    +H ++ K       FA + L+++Y K   +  A ++F
Sbjct: 262 NEFTYAGVLRACAEFTSEKLGKQVHGRMAKSRTGDSCFAGSALVHMYSKYGDMGTAMRVF 321

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             MP+ + +S+   I GY  + Q  EA+  F  L   G   +   F   L      G  +
Sbjct: 322 RGMPKPDLVSWTAMISGYAQNGQPDEALHCFDMLLSSGFRPDHVTFVGVLSACAHAGLVD 381

Query: 175 LCPCVFACV---YKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFS 231
               +F  +   Y + H ++ +    +ID  S  G                FE A +  +
Sbjct: 382 KGLGIFHSIKDKYGIEHTADHY--ACVIDLLSRSG---------------LFERAEDMIN 424

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
            M     KPN F +A +L  C     +R+A  A   AL      +    V L ++Y   G
Sbjct: 425 TM---PVKPNKFLWASLLGGCRIHKNVRLAWWA-AEALFEIEPENPATYVTLANIYASVG 480

Query: 292 ---EISNARRIFE-----EMPKKDVIPWSFMIARYAQTDLSIDAVE--------LFCRMR 335
              E+ N RR  E     +MP    I     +  +   D S    E        L+ +MR
Sbjct: 481 LFDEVENMRRTMELRGITKMPASSWIEVGTRVHVFLVGDKSHPQAEEIYALLKKLYVKMR 540

Query: 336 -QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLS 376
            + +VA   F    V       +  D+G     L V  G+++
Sbjct: 541 EEGYVADTGFVLHDVED---EQKQQDIGYHSERLAVAFGIIA 579


>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
          Length = 742

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 239/735 (32%), Positives = 369/735 (50%), Gaps = 96/735 (13%)

Query: 72  LQTAMTIHCQVLKKG-NCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQ 130
           ++ A  +HC +LK        F  N LL  Y K  RL  A ++FDEMP+ N  +    + 
Sbjct: 28  VRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLS 87

Query: 131 GYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDS 190
               S    +   LF+++                                        + 
Sbjct: 88  ALAHSRLVPDMERLFASMP---------------------------------------ER 108

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLK 250
           +A    ALI  FS  G    + +++  L              +R    +P   T + ++ 
Sbjct: 109 DAVSYNALITGFSSTGSPARSVQLYRAL--------------LREESVRPTRITLSAMIM 154

Query: 251 ACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK---- 306
               L    +  S H   L+  +    +V   L+D+Y K G I +ARR+F+EM  K    
Sbjct: 155 VASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVM 214

Query: 307 ---------------------------DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
                                      D I W+ M+    Q  L ++A+++F RMR   V
Sbjct: 215 YNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGV 274

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
             +Q+TF S+L AC  +  L+ G QIH+ + R     +VFV +AL+D+Y+KC  +  +  
Sbjct: 275 GIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEA 334

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +F     RN ++W  MIVGY Q     +A+  FS+M  + +   + T  SV+ +CA+LA+
Sbjct: 335 VFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLAS 394

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
           LE G Q HCL + +     + V+NAL+ +Y KCGSI DA  +FD M+  ++VSW A+++G
Sbjct: 395 LEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTG 454

Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
           Y+  G + E + +F+ M   G +P+ +TF+GVLSACS  GL+E+G  YF SM  ++GI P
Sbjct: 455 YAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVP 514

Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHI 639
             +HYT M+ L  R+G   +A + I+ +P  P    W  LL +C +  N+EIG+ +A+++
Sbjct: 515 IDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENL 574

Query: 640 LDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAG 688
           L+ +P++ A++VLL +++A    W + A            KEPG SWI+ +  VH F A 
Sbjct: 575 LETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSAD 634

Query: 689 DTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALF 748
           D SH   + I   LEWLN K  + GY PD+S+VL DV + +K   +  HSEKLA+AF L 
Sbjct: 635 DQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLI 694

Query: 749 KMPPSSPIRIIKNLR 763
            +P   PIRI+KNLR
Sbjct: 695 FVPQEMPIRIVKNLR 709



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 207/431 (48%), Gaps = 66/431 (15%)

Query: 254 GLDTIRVAKSAHGCALKTCYEMD-LYVAVALLDLYTKSGEISNARRIFEE---------- 302
           G   +RVA + H   LKT  +    ++   LL  Y KSG ++ ARR+F+E          
Sbjct: 24  GRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRN 83

Query: 303 ---------------------MPKKDVIPWSFMIARYAQTDLSIDAVELF-CRMRQAFVA 340
                                MP++D + ++ +I  ++ T     +V+L+   +R+  V 
Sbjct: 84  ALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVR 143

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           P + T  +++   + +    LG+ +H  V+R+G  +  FV + L+D+YAK G + ++  +
Sbjct: 144 PTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRV 203

Query: 401 FAESP-------------------------------KRNHVTWNTMIVGYVQLGEVGKAM 429
           F E                                  R+ +TW TM+ G  Q G   +A+
Sbjct: 204 FQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEAL 263

Query: 430 IMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMY 489
            +F +M  E V   + T+ S+L AC +LAALE G Q+H    +  Y+ +V V +AL+DMY
Sbjct: 264 DVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMY 323

Query: 490 AKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFV 549
           +KC SI  A  VF  M   N +SW AMI GY  +  S E ++ F  MQ  G +P++ T  
Sbjct: 324 SKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLG 383

Query: 550 GVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF 609
            V+S+C+N   LE+G A F  +    G+   I    ++V+L G+ G ++ A +L + + F
Sbjct: 384 SVISSCANLASLEEG-AQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSF 442

Query: 610 QPSVMIWRALL 620
              V  W AL+
Sbjct: 443 HDQVS-WTALV 452



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 118/286 (41%), Gaps = 28/286 (9%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
            + +++ + L +C     L+    IH  + +     ++F  + L+++Y K   +  A  +
Sbjct: 276 IDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAV 335

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           F  M  RN IS+   I GY  ++   EAV  FS +  +G + + F   + +    ++   
Sbjct: 336 FRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASL 395

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-FNDCF--------- 223
           E            G      V  AL+  +  CG +E A ++FD + F+D           
Sbjct: 396 EEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGY 455

Query: 224 ------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
                 +E ++ F +M A G KP+  TF  VL AC      R      GC      + D 
Sbjct: 456 AQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSAC-----SRAGLVEKGCDYFDSMQKDH 510

Query: 278 YVA------VALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
            +         ++DLY++SG    A    ++MP   D   W+ +++
Sbjct: 511 GIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLS 556



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 81/209 (38%), Gaps = 17/209 (8%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           + SC     L+     HC  L  G    +  +N L+ +Y K   + DA +LFDEM   + 
Sbjct: 386 ISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQ 445

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +S+   + GY    +  E + LF  +   G + +   F   L      G  E     F  
Sbjct: 446 VSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDS 505

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNN 242
           + K  H      G   ID    C    ++R       +  F+EA  F  QM      P+ 
Sbjct: 506 MQK-DH------GIVPIDDHYTCMIDLYSR-------SGRFKEAEEFIKQM---PHSPDA 548

Query: 243 FTFAFVLKACLGLDTIRVAKSAHGCALKT 271
           F +A +L +C     + + K A    L+T
Sbjct: 549 FGWATLLSSCRLRGNMEIGKWAAENLLET 577


>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
          Length = 541

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 214/522 (40%), Positives = 305/522 (58%), Gaps = 20/522 (3%)

Query: 304 PKKDVIPWSFMI-----ARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           P  +   W+ +I     AR   T  +   + +F RMR   V P+  TF  +LQ+ A+   
Sbjct: 20  PTLESFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSL 79

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           L LG  +H+ ++R GL  D FV  +L+ +Y+  G ++ +  LFA  P+RN ++W+ MI G
Sbjct: 80  LHLGRSVHAQILRFGLAIDPFVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMING 139

Query: 419 YVQLGEVGKAMIMFSKMLE---EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY 475
           YV+ G+  +A+ +F +M       V   E T S VL AC  L ALE G   H    K   
Sbjct: 140 YVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGM 199

Query: 476 DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEV-SWNAMISGYSMHGLSAEVLKVFD 534
            +DVV+  ALIDMYAKCGS+  A  VF  +    +V +W+AMISG +MHGL+ E + +F 
Sbjct: 200 PVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFS 259

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
            M  +G RPN +TF+ V  AC +GGL+ +G+ Y + M  +Y I P I+HY  MV L GRA
Sbjct: 260 KMINQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRA 319

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLS 654
           G + +A  +++ +P +P V++W ALL    +H ++E   L+ + +++ EP +   +VLLS
Sbjct: 320 GRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLS 379

Query: 655 NIYAMARSWEK-----------AASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLE 703
           N+YA    WE               K PG S IE  G++H F  GD SH +   I  MLE
Sbjct: 380 NVYAKRGRWEDVRHVRDLMETMGIKKVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLE 439

Query: 704 WLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLR 763
            +  + +  GY+ +   VL D+ E+ KE  L +HSEKLALA+   K  P +PIRI+KNLR
Sbjct: 440 EILERLKVEGYVGNTKEVLLDLDEEGKELALSLHSEKLALAYGFLKTSPGTPIRIVKNLR 499

Query: 764 ICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           IC DCH AIK+ISK+  REII+RD +RFHHF  G CSC D+W
Sbjct: 500 ICRDCHVAIKMISKVFDREIIVRDCNRFHHFTQGLCSCRDYW 541



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 162/305 (53%), Gaps = 8/305 (2%)

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           ++ F +MR  G +P+  TF F+L++      + + +S H   L+    +D +V  +L+ +
Sbjct: 49  ISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRSVHAQILRFGLAIDPFVQTSLISM 108

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF---VAPNQ 343
           Y+ SG +  AR +F  MP+++VI WS MI  Y +     +A+ LF  M+      V PN+
Sbjct: 109 YSSSGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNE 168

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
           FT   VL AC  +  L+ G   H+ + + G+  DV +  AL+D+YAKCG +E +  +F+ 
Sbjct: 169 FTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSN 228

Query: 404 -SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
             P ++ + W+ MI G    G   + + +FSKM+ + V    VT+ +V  AC     +  
Sbjct: 229 LGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSE 288

Query: 463 GMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISG 519
           G + +   +  +Y +   + +   ++D+Y + G I +A  +V  M  + + + W A++SG
Sbjct: 289 G-KDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSG 347

Query: 520 YSMHG 524
             MHG
Sbjct: 348 SRMHG 352



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 136/313 (43%), Gaps = 40/313 (12%)

Query: 38  QCSNSTTTPIT------FSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDL 91
           Q +  T +PI+      F   + + H++   LQS      L    ++H Q+L+ G  +D 
Sbjct: 40  QPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRSVHAQILRFGLAIDP 99

Query: 92  FATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHRE 151
           F    L+++Y     +  A  LF  MPERN IS+   I GY    Q+ EA+ LF  +   
Sbjct: 100 FVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQML 159

Query: 152 G-HELNP--FAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCV 208
           G +++ P  F  +  L     +G  E      A + K G   +  +GTALID ++ CG V
Sbjct: 160 GVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSV 219

Query: 209 EFARKVFDGL-----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKA 251
           E A  VF  L                  +   EE +  FS+M   G +PN  TF  V  A
Sbjct: 220 EKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCA 279

Query: 252 CL-------GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
           C+       G D +R     +   + T           ++DLY ++G I  A  + + MP
Sbjct: 280 CVHGGLVSEGKDYLRRMTEDYSI-IPTIQHYG-----CMVDLYGRAGRIKEAWNVVKSMP 333

Query: 305 -KKDVIPWSFMIA 316
            + DV+ W  +++
Sbjct: 334 MEPDVLVWGALLS 346


>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Glycine max]
          Length = 609

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 214/584 (36%), Positives = 340/584 (58%), Gaps = 19/584 (3%)

Query: 237 GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS-- 294
             +P + +   ++  C  L   R  K      +KT ++ +  V   L++  T +  I+  
Sbjct: 30  ALEPPSSSILSLIPKCTSL---RELKQIQAYTIKT-HQNNPTVLTKLINFCTSNPTIASM 85

Query: 295 -NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
            +A R+F+++P+ D++ ++ M   YA+ D  + A+ L  ++  + + P+ +TF S+L+AC
Sbjct: 86  DHAHRMFDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKAC 145

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
           A ++ L+ G Q+H L V++G+  +++V   L+++Y  C  ++ +  +F +  +   V +N
Sbjct: 146 ARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYN 205

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
            +I    +     +A+ +F ++ E  +  T+VT    L +CA L AL+ G  +H    K 
Sbjct: 206 AIITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKN 265

Query: 474 NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVF 533
            +D  V V  ALIDMYAKCGS+ DA  VF  M   +  +W+AMI  Y+ HG  ++ + + 
Sbjct: 266 GFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISML 325

Query: 534 DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGR 593
             M++   +P+ +TF+G+L ACS+ GL+E+G  YF SM   YGI P I+HY  M+ LLGR
Sbjct: 326 REMKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLGR 385

Query: 594 AGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLL 653
           AG L++A K I+ +P +P+ ++WR LL +C  H NVE+ +L  Q I + +      +V+L
Sbjct: 386 AGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGNVEMAKLVIQRIFELDDSHGGDYVIL 445

Query: 654 SNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGML 702
           SN+ A    W           +K A K PG S IE   +VH F +GD  H+   I+   L
Sbjct: 446 SNLCARNGRWDDVNHLRKMMVDKGALKVPGCSSIEVNNVVHEFFSGDGVHSTSTILHHAL 505

Query: 703 EWLNMKSRKAGYIPDLSAVL-RDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKN 761
           + L  + + AGY+PD S V   D+ ++EKE  L  HSEKLA+ + L   PP + IR++KN
Sbjct: 506 DELVKELKLAGYVPDTSLVFYADIEDEEKEIVLRYHSEKLAITYGLLNTPPGTTIRVVKN 565

Query: 762 LRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           LR+CVDCH A K IS I  R+II+RDV RFHHF+DG CSCGD+W
Sbjct: 566 LRVCVDCHNAAKFISLIFGRQIILRDVQRFHHFKDGKCSCGDYW 609



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 187/378 (49%), Gaps = 25/378 (6%)

Query: 188 HDSNAFVGTALID---AFSVCGCVEFARKVFDG-------LFNDCFEEALNFFSQMRAV- 236
           H +N  V T LI+   +      ++ A ++FD        LFN        F   +RA+ 
Sbjct: 62  HQNNPTVLTKLINFCTSNPTIASMDHAHRMFDKIPQPDIVLFNTMARGYARFDDPLRAIL 121

Query: 237 --------GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYT 288
                   G  P+++TF+ +LKAC  L  +   K  H  A+K     ++YV   L+++YT
Sbjct: 122 LCSQVLCSGLLPDDYTFSSLLKACARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYT 181

Query: 289 KSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVS 348
              ++  ARR+F+++ +  V+ ++ +I   A+     +A+ LF  ++++ + P   T + 
Sbjct: 182 ACNDVDAARRVFDKIGEPCVVAYNAIITSCARNSRPNEALALFRELQESGLKPTDVTMLV 241

Query: 349 VLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRN 408
            L +CA +  LDLG  IH  V + G    V V+ AL+D+YAKCG ++++V +F + P+R+
Sbjct: 242 ALSSCALLGALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRD 301

Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ-VH 467
              W+ MIV Y   G   +A+ M  +M + +V   E+T+  +L AC+    +E G +  H
Sbjct: 302 TQAWSAMIVAYATHGHGSQAISMLREMKKAKVQPDEITFLGILYACSHTGLVEEGYEYFH 361

Query: 468 CLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHG-- 524
            +T +      +     +ID+  + G + +A + + ++      + W  ++S  S HG  
Sbjct: 362 SMTHEYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGNV 421

Query: 525 --LSAEVLKVFDLMQQRG 540
                 + ++F+L    G
Sbjct: 422 EMAKLVIQRIFELDDSHG 439



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 163/346 (47%), Gaps = 18/346 (5%)

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A ++FD++P+ + + F T  +GY      + A+ L S +   G   + + F++ LK    
Sbjct: 88  AHRMFDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACAR 147

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF------ 223
           +   E    +     KLG   N +V   LI+ ++ C  V+ AR+VFD +   C       
Sbjct: 148 LKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYNAI 207

Query: 224 ----------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY 273
                      EAL  F +++  G KP + T    L +C  L  + + +  H    K  +
Sbjct: 208 ITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKNGF 267

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
           +  + V  AL+D+Y K G + +A  +F++MP++D   WS MI  YA       A+ +   
Sbjct: 268 DQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISMLRE 327

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQ-IHSLVVRVGLLSDVFVSNALMDVYAKCG 392
           M++A V P++ TF+ +L AC+    ++ G +  HS+    G++  +     ++D+  + G
Sbjct: 328 MKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLGRAG 387

Query: 393 RMENSVELFAESP-KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
           R+E + +   E P K   + W T++      G V  A ++  ++ E
Sbjct: 388 RLEEACKFIDELPIKPTPILWRTLLSSCSSHGNVEMAKLVIQRIFE 433



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 87/441 (19%), Positives = 179/441 (40%), Gaps = 46/441 (10%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           + +++++ L++C +   L+    +HC  +K G   +++    L+N+Y   N +  A ++F
Sbjct: 134 DDYTFSSLLKACARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVF 193

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D++ E   +++   I     +S+  EA+ LF  L   G +         L     +G  +
Sbjct: 194 DKIGEPCVVAYNAIITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALD 253

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFE---------- 224
           L   +   V K G D    V TALID ++ CG ++ A  VF  +     +          
Sbjct: 254 LGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYA 313

Query: 225 ------EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                 +A++   +M+    +P+  TF  +L AC       + +  +       +E  + 
Sbjct: 314 THGHGSQAISMLREMKKAKVQPDEITFLGILYAC---SHTGLVEEGYEYFHSMTHEYGIV 370

Query: 279 VAVA----LLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIARYAQTDLSIDAVELFCR 333
            ++     ++DL  ++G +  A +  +E+P K   I W  +++    +  +++  +L  +
Sbjct: 371 PSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSS-CSSHGNVEMAKLVIQ 429

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLL-----SDVFVSNALMDVY 388
                   +   +V +   CA     D  N +  ++V  G L     S + V+N + + +
Sbjct: 430 RIFELDDSHGGDYVILSNLCARNGRWDDVNHLRKMMVDKGALKVPGCSSIEVNNVVHEFF 489

Query: 389 AKCGRMENSV-------ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIM--------FS 433
           +  G    S        EL  E     +V  +T +V Y  + +  K +++         +
Sbjct: 490 SGDGVHSTSTILHHALDELVKELKLAGYVP-DTSLVFYADIEDEEKEIVLRYHSEKLAIT 548

Query: 434 KMLEEQVPATEVTYSSVLRAC 454
             L    P T +     LR C
Sbjct: 549 YGLLNTPPGTTIRVVKNLRVC 569


>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
          Length = 528

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 213/532 (40%), Positives = 319/532 (59%), Gaps = 26/532 (4%)

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVS------ 348
           +ARR F+E+P  + +  + M + Y + +L   ++ELF    +A +A +  + V       
Sbjct: 2   DARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELF----RAMIASDSASVVDEAAALV 57

Query: 349 VLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR--MENSVELFAESPK 406
              A A +    +   +H+L+ ++G   +  V N ++D YAK G   +E + ++F ++ +
Sbjct: 58  AFSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVF-DTME 116

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE--EQVPATEVTYSSVLRACASLAALEPGM 464
           R+ V+WN+MI  Y Q G   +A+ ++SKML     +    V  S+VL ACA   A++ G 
Sbjct: 117 RDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGK 176

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
            +H   V+   + +V V  +++DMY+KCG +  A   F  + + N +SW+AMI+GY MHG
Sbjct: 177 HIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHG 236

Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY 584
              E L++F  M++ G RPN +TF+ VL+ACS+ GLL++G  ++ +M   +GIE  +EHY
Sbjct: 237 RGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHY 296

Query: 585 TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEP 644
             MV LLGRAG LD+A  LI+ +  +P   IW ALL AC IH NVE+  +S + + + + 
Sbjct: 297 GCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDA 356

Query: 645 EDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHA 693
            +   +VLLSNIYA A  W+           +   K PG S  E +G ++ F  GD SH 
Sbjct: 357 SNSGYYVLLSNIYAEAGMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHP 416

Query: 694 DMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPS 753
               I   LE L  + ++AGY+P+  +VL D+ E+EKE  L +HSEKLA+AFAL    P 
Sbjct: 417 QHIEIYSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPR 476

Query: 754 SPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           S I IIKNLR+C DCHTA+K I+KI +REIIIRD+ RFHHF+DG CSC D+W
Sbjct: 477 SVIHIIKNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 528



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 158/337 (46%), Gaps = 35/337 (10%)

Query: 109 DATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLF--------STLHREGHELNPFAF 160
           DA + FDE+P+ N +       GY  ++    ++ LF        +++  E   L   AF
Sbjct: 2   DARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAAL--VAF 59

Query: 161 TAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGC--VEFARKVFDGL 218
           +A  +V      A L     A + K+G + NA V   ++D+++  G   +E ARKVFD +
Sbjct: 60  SASARVPDRGVTASL----HALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM 115

Query: 219 FNDCFE---------------EALNFFSQMRAVG--FKPNNFTFAFVLKACLGLDTIRVA 261
             D                  EA+  +S+M  VG   K N    + VL AC     I+  
Sbjct: 116 ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTG 175

Query: 262 KSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQT 321
           K  H   ++   E ++YV  +++D+Y+K G +  A R F ++ +K+++ WS MI  Y   
Sbjct: 176 KHIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMH 235

Query: 322 DLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ-IHSLVVRVGLLSDVFV 380
               +A+E+F  M+++ + PN  TF+SVL AC+    LD G    +++    G+ + V  
Sbjct: 236 GRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEH 295

Query: 381 SNALMDVYAKCGRMENSVELFAE-SPKRNHVTWNTMI 416
              ++D+  + G ++ +  L  E   K +   W  ++
Sbjct: 296 YGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALL 332



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 113/249 (45%), Gaps = 26/249 (10%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N+ + +  L +C     +QT   IH QV++ G   +++    ++++Y K  R+  A++ F
Sbjct: 155 NAVALSAVLLACAHAGAIQTGKHIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAF 214

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
            ++ E+N +S+   I GY +  +  EA+ +F+ + R G   N   +  F+ VL +   A 
Sbjct: 215 RKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPN---YITFISVLAACSHAG 271

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN-DCFEEALNFFSQM 233
           L             D   +   A+   F +   VE    + D L    C +EA +   +M
Sbjct: 272 LL------------DEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEM 319

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA---VALLDLYTKS 290
           +    KP+   +  +L AC     + +A+     ++K  +E+D   +   V L ++Y ++
Sbjct: 320 K---VKPDAAIWGALLSACRIHKNVELAE----MSVKRLFELDASNSGYYVLLSNIYAEA 372

Query: 291 GEISNARRI 299
           G   +  RI
Sbjct: 373 GMWKDVERI 381


>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
          Length = 663

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 208/522 (39%), Positives = 316/522 (60%), Gaps = 32/522 (6%)

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV 370
           W+F+I  Y + +   +A+ ++ ++R+     + F   SVL+AC  +    LG +IH  V+
Sbjct: 127 WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 186

Query: 371 RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTW----NTMIVGYVQLGEVG 426
           + GL  DVFV NALM +Y +C  +E +  +F +  +R+ V+W      ++  Y + G +G
Sbjct: 187 KKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTALLDMYAKCGHLG 246

Query: 427 KAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVH-------------CLTVKA 473
            A  +F+ + ++ V    V++++++  C     LE G ++               +  K 
Sbjct: 247 LARQLFNGLTQKTV----VSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLNKE 302

Query: 474 NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVF 533
             ++D ++  AL+DMYAKCG I  A  +F      +   WNA+I+G++MHG   E L +F
Sbjct: 303 RVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIF 362

Query: 534 DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGR 593
             M+++G +PN++TF+G+L ACS+ GL+ +G+  F+ MV  +G+ P IEHY  MV LLGR
Sbjct: 363 AEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGR 422

Query: 594 AGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLL 653
           AG LD+A ++I+ +P +P+ ++W AL+ AC +H N ++G L+A  +L+ EPE+   +VL+
Sbjct: 423 AGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLM 482

Query: 654 SNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGML 702
           SNIYA A  W  AA            KEPG S IE  G VH F  GD SH  +  I  ML
Sbjct: 483 SNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEML 542

Query: 703 EWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNL 762
             +  K  +AGY+PD S VL ++ E+EKE  L  HSEKLA+AF L    PS+PIRI+KNL
Sbjct: 543 AEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNL 602

Query: 763 RICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
           R+C DCH A K++SKI  R II+RD +RFHHF++G CSCGD+
Sbjct: 603 RVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDY 644



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 153/339 (45%), Gaps = 67/339 (19%)

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA----- 280
           ALN ++Q+R + F+ +NF    VLKAC  +   ++ K  HG  LK   + D++V      
Sbjct: 143 ALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALML 202

Query: 281 ------------------------------VALLDLYTKSGEISNARRIFEEMPKKDVIP 310
                                          ALLD+Y K G +  AR++F  + +K V+ 
Sbjct: 203 MYGECACVEYARLVFDKMMERDVVSWIPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVS 262

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV 370
           W+ MIA   +++   +  +LF RM++  + PN+ T ++        E +++         
Sbjct: 263 WTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLN-------KERVEV--------- 306

Query: 371 RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMI 430
                 D  ++ AL+D+YAKCG +  +  LF E+  R+   WN +I G+   G   +A+ 
Sbjct: 307 ------DCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALD 360

Query: 431 MFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ-----VHCLTVKANYDMDVVVANAL 485
           +F++M  + V   ++T+  +L AC+    +  G +     VH   +    +        +
Sbjct: 361 IFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEH----YGCM 416

Query: 486 IDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
           +D+  + G + +A  ++  M    N + W A+++   +H
Sbjct: 417 VDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLH 455



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 100/420 (23%), Positives = 175/420 (41%), Gaps = 55/420 (13%)

Query: 50  SVSEFNSHSYATSLQSCIQND--DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRL 107
           S  +FN     T   S  Q+D   L+    IH  ++K         T+    + + LN  
Sbjct: 67  STLKFNPTPLQTPPTSPSQHDLSTLEQTKQIHAHIIK---------THFHHALQIPLNDF 117

Query: 108 PDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVL 167
           P        +      +FV T   YT  +Q   A+ +++ L +   E++ F   + LK  
Sbjct: 118 PSG------LSPSAQWNFVIT--SYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKAC 169

Query: 168 VSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN------- 220
             + W +L   +   V K G D + FVG AL+  +  C CVE+AR VFD +         
Sbjct: 170 GQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWI 229

Query: 221 DCFEEALNFFSQMRAVGFKP---NNFTFAFVLK-ACLGLDTIRVAKSAHGCAL------- 269
                 L+ +++   +G      N  T   V+    +    IR  +   G  L       
Sbjct: 230 PTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEE 289

Query: 270 -----------KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARY 318
                      K   E+D  +  AL+D+Y K G+I+ A R+F E   +D+  W+ +I  +
Sbjct: 290 NIFPNEITMLNKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGF 349

Query: 319 AQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI-HSLVVRVGLLSD 377
           A      +A+++F  M +  V PN  TF+ +L AC+    +  G ++   +V   GL+  
Sbjct: 350 AMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQ 409

Query: 378 VFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMIVG-----YVQLGEVGKAMIM 431
           +     ++D+  + G ++ + E+    P K N + W  ++         QLGE+    ++
Sbjct: 410 IEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLL 469



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 75/302 (24%), Positives = 127/302 (42%), Gaps = 40/302 (13%)

Query: 49  FSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLP 108
           F V  F + S    L++C Q    Q    IH  VLKKG   D+F  N L+ +Y +   + 
Sbjct: 155 FEVDNFMAPSV---LKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVE 211

Query: 109 DATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFL---- 164
            A  +FD+M ER+ +S++ T             +GL   L     +    ++TA +    
Sbjct: 212 YARLVFDKMMERDVVSWIPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCI 271

Query: 165 ---------KVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF 215
                    K+ + M    + P     + K   + +  + TAL+D ++ CG +  A ++F
Sbjct: 272 RSNRLEEGTKLFIRMQEENIFPNEITMLNKERVEVDCILNTALVDMYAKCGDINAAGRLF 331

Query: 216 -DGLFND-CF--------------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIR 259
            + +  D C               EEAL+ F++M   G KPN+ TF  +L AC     + 
Sbjct: 332 IEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVT 391

Query: 260 VAKSAHGCALKTCYEMDLYVAVA----LLDLYTKSGEISNARRIFEEMP-KKDVIPWSFM 314
             K       K  +   L   +     ++DL  ++G +  A  + + MP K + I W  +
Sbjct: 392 EGKKLFE---KMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGAL 448

Query: 315 IA 316
           +A
Sbjct: 449 VA 450


>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
 gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
          Length = 687

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 232/652 (35%), Positives = 355/652 (54%), Gaps = 48/652 (7%)

Query: 187 GHDSNAFVGTALIDAFSVCGCVEFARKVF--------------------DGLFNDCFEEA 226
           G  ++ FV TAL+D +  C C+  A  +F                     G+++      
Sbjct: 40  GLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHL 99

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD---------- 276
           L+   QM+    +PN  T   +L        +    S H   ++ C   +          
Sbjct: 100 LSM--QMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDG 157

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           + +  ALLD+Y K G +  ARR+F+ MP ++ + WS +I  +        A  LF  M  
Sbjct: 158 VLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLA 217

Query: 337 ---AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
               F++P   +  S L+ACA+++ L +G Q+H+L+ + G+ +D+   N+L+ +YAK G 
Sbjct: 218 QGLCFLSPT--SIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGL 275

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           ++ ++ LF E   ++ V+++ ++ GYVQ G   +A ++F KM    V     T  S++ A
Sbjct: 276 IDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPA 335

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
           C+ LAAL+ G   H   +      +  + NALIDMYAKCG I  +R VF+MM   + VSW
Sbjct: 336 CSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSW 395

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA 573
           N MI+GY +HGL  E   +F  M   G+ P+ +TF+ +LSACS+ GL+ +G+ +F  M  
Sbjct: 396 NTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGH 455

Query: 574 NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGR 633
            YG+ P +EHY  MV LL R G LD+A + I+ +P +  V +W ALLGAC ++ N+++G+
Sbjct: 456 GYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGK 515

Query: 634 LSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMV 682
             ++ I +  PE     VLLSNIY+ A  +++AA            K PG SWIE  G +
Sbjct: 516 KVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSL 575

Query: 683 HYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLA 742
           H F  GD SH     I   L+ + +  +K GY PD S VL+D+ E+EKE+ L  HSEKLA
Sbjct: 576 HAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLA 635

Query: 743 LAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHF 794
           +A+ +  +     I + KNLR+C DCHT IK IS + +R II+RD +RFHHF
Sbjct: 636 IAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRAIIVRDANRFHHF 687



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/401 (31%), Positives = 207/401 (51%), Gaps = 15/401 (3%)

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           PNN+TF F LKAC  L      ++ H  A+    + DL+V+ ALLD+Y K   + +A  I
Sbjct: 8   PNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHI 67

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVE--LFCRMRQAFVAPNQFTFVSVLQACATME 357
           F  MP +D++ W+ M+A YA   +   AV   L  +M+   + PN  T V++L   A   
Sbjct: 68  FATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQG 127

Query: 358 GLDLGNQIHSLVVRVGL---------LSD-VFVSNALMDVYAKCGRMENSVELFAESPKR 407
            L  G  +H+  +R  L         L+D V +  AL+D+YAKCG +  +  +F   P R
Sbjct: 128 ALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR 187

Query: 408 NHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVP-ATEVTYSSVLRACASLAALEPGMQV 466
           N VTW+ +I G+V    + +A ++F  ML + +   +  + +S LRACASL  L  G Q+
Sbjct: 188 NEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQL 247

Query: 467 HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLS 526
           H L  K+    D+   N+L+ MYAK G I  A  +FD M   + VS++A++SGY  +G +
Sbjct: 248 HALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRA 307

Query: 527 AEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTS 586
            E   VF  MQ     P+  T V ++ ACS+   L+ G     S++   G+        +
Sbjct: 308 EEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR-GLASETSICNA 366

Query: 587 MVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
           ++ +  + G +D + ++   +P +  ++ W  ++    IH 
Sbjct: 367 LIDMYAKCGRIDLSRQVFNMMPSR-DIVSWNTMIAGYGIHG 406



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/432 (31%), Positives = 215/432 (49%), Gaps = 33/432 (7%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N++++  +L++C    D      IH   +  G   DLF +  LL++YVK   LPDA  +F
Sbjct: 9   NNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIF 68

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFT--AFLKVL----- 167
             MP R+ +++   + GY     +  AV    ++  + H L P A T  A L +L     
Sbjct: 69  ATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGA 128

Query: 168 VSMGWAELCPCVFACVY-----KLGHDSNAFVGTALIDAFSVCGCVEFARKVFD------ 216
           ++ G +    C+ AC++     K        +GTAL+D ++ CG + +AR+VFD      
Sbjct: 129 LAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARN 188

Query: 217 --------GLFNDC--FEEALNFFSQMRAVG---FKPNNFTFAFVLKACLGLDTIRVAKS 263
                   G F  C    +A   F  M A G     P   + A  L+AC  LD +R+ + 
Sbjct: 189 EVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASLDHLRMGEQ 246

Query: 264 AHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDL 323
            H    K+    DL    +LL +Y K+G I  A  +F+EM  KD + +S +++ Y Q   
Sbjct: 247 LHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGR 306

Query: 324 SIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNA 383
           + +A  +F +M+   V P+  T VS++ AC+ +  L  G   H  V+  GL S+  + NA
Sbjct: 307 AEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNA 366

Query: 384 LMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPAT 443
           L+D+YAKCGR++ S ++F   P R+ V+WNTMI GY   G   +A  +F +M     P  
Sbjct: 367 LIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPD 426

Query: 444 EVTYSSVLRACA 455
            VT+  +L AC+
Sbjct: 427 GVTFICLLSACS 438



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/290 (31%), Positives = 147/290 (50%), Gaps = 18/290 (6%)

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           VAPN +TF   L+AC+ +     G  IH   +  GL +D+FVS AL+D+Y KC  + ++ 
Sbjct: 6   VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAA 65

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAM--IMFSKMLEEQVPATEVTYSSVLRACAS 456
            +FA  P R+ V WN M+ GY   G    A+  ++  +M   ++     T  ++L   A 
Sbjct: 66  HIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQ 125

Query: 457 LAALEPGMQVHCLTVKANYDMD----------VVVANALIDMYAKCGSITDARLVFDMMN 506
             AL  G  VH   ++A    +          V++  AL+DMYAKCGS+  AR VFD M 
Sbjct: 126 QGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMP 185

Query: 507 DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG---WRPNNLTFVGVLSACSNGGLLEQ 563
             NEV+W+A+I G+ +     +   +F  M  +G     P ++     L AC++   L  
Sbjct: 186 ARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASLDHLRM 243

Query: 564 GEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSV 613
           GE    +++A  G+   +    S++S+  +AG +D+A  L + +  + +V
Sbjct: 244 GEQ-LHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTV 292



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 22/207 (10%)

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGS 494
           ML  +V     T+   L+AC++LA    G  +H   + A    D+ V+ AL+DMY KC  
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 495 ITDARLVFDMMNDWNEVSWNAMISGYSMHGL-SAEVLKVFDL-MQQRGWRPNNLTFVGVL 552
           + DA  +F  M   + V+WNAM++GY+ HG+    V  +  + MQ    RPN  T V +L
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHY--------------TSMVSLLGRAGHLD 598
              +  G L QG +     V  Y I  C+                 T+++ +  + G L 
Sbjct: 121 PLLAQQGALAQGTS-----VHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLL 175

Query: 599 KAAKLIEGIPFQPSVMIWRALLGACII 625
            A ++ + +P +  V  W AL+G  ++
Sbjct: 176 YARRVFDAMPARNEV-TWSALIGGFVL 201



 Score = 47.0 bits (110), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 52/112 (46%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E ++ +  + + +C     LQ     H  V+ +G   +    N L+++Y K  R+  + +
Sbjct: 323 EPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQ 382

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFL 164
           +F+ MP R+ +S+ T I GY +     EA  LF  ++  G   +   F   L
Sbjct: 383 VFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLL 434


>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g56690, mitochondrial; Flags: Precursor
 gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
 gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 246/720 (34%), Positives = 375/720 (52%), Gaps = 95/720 (13%)

Query: 105 NRLP-DATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAF 163
           N LP +A +LFDEM ERN +S+   + GY  +   VEA  +F  +     E N  ++TA 
Sbjct: 61  NGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMP----ERNVVSWTAM 116

Query: 164 LKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF 223
           +K                     G+     VG                            
Sbjct: 117 VK---------------------GYMQEGMVG---------------------------- 127

Query: 224 EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM----DLYV 279
            EA + F +M      P     ++ +     +D  R+ K+      +  Y+M    D+  
Sbjct: 128 -EAESLFWRM------PERNEVSWTVMFGGLIDDGRIDKA------RKLYDMMPVKDVVA 174

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
           +  ++    + G +  AR IF+EM +++V+ W+ MI  Y Q +    A +LF    +   
Sbjct: 175 STNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLF----EVMP 230

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSL--VVRVGLLSDVFVSNALMDVYAKCGRMENS 397
              + ++ S+L       G  L  +I        V  +  V   NA++  + + G +  +
Sbjct: 231 EKTEVSWTSMLL------GYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKA 284

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
             +F     R++ TW  MI  Y + G   +A+ +F++M ++ V  +  +  S+L  CA+L
Sbjct: 285 RRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATL 344

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
           A+L+ G QVH   V+  +D DV VA+ L+ MY KCG +  A+LVFD  +  + + WN++I
Sbjct: 345 ASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSII 404

Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
           SGY+ HGL  E LK+F  M   G  PN +T + +L+ACS  G LE+G   F+SM + + +
Sbjct: 405 SGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCV 464

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQ 637
            P +EHY+  V +LGRAG +DKA +LIE +  +P   +W ALLGAC  H+ +++  ++A+
Sbjct: 465 TPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAK 524

Query: 638 HILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYF- 685
            + + EP++  T+VLLS+I A    W   A           SK PG SWIE    VH F 
Sbjct: 525 KLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFT 584

Query: 686 RAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAF 745
           R G  +H +  +I  MLE  +   R+AGY PD S VL DV E+EK   L  HSE+LA+A+
Sbjct: 585 RGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAY 644

Query: 746 ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            L K+P   PIR++KNLR+C DCH AIK+ISK+ +REII+RD +RFHHF +G CSC D+W
Sbjct: 645 GLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 115/449 (25%), Positives = 204/449 (45%), Gaps = 28/449 (6%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           ++ + N L++ Y+K   + +A  +F+ MPERN +S+   ++GY       EA  LF  + 
Sbjct: 78  NVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRM- 136

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
               E N  ++T     L+  G  +        +Y +    +    T +I      G V+
Sbjct: 137 ---PERNEVSWTVMFGGLIDDGRIDKA----RKLYDMMPVKDVVASTNMIGGLCREGRVD 189

Query: 210 FARKVFDGLFNDCFEEALNFFSQMRAVGFKPNN-FTFAFVLKACLGLDT-IRVAKSAHGC 267
            AR +FD    +  E  +  ++ M   G++ NN    A  L   +   T +       G 
Sbjct: 190 EARLIFD----EMRERNVVTWTTM-ITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGY 244

Query: 268 ALKTCYE----------MDLYVAV-ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIA 316
            L    E          M   +A  A++  + + GEIS ARR+F+ M  +D   W  MI 
Sbjct: 245 TLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIK 304

Query: 317 RYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLS 376
            Y +    ++A++LF +M++  V P+  + +S+L  CAT+  L  G Q+H+ +VR     
Sbjct: 305 AYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDD 364

Query: 377 DVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML 436
           DV+V++ LM +Y KCG +  +  +F     ++ + WN++I GY   G   +A+ +F +M 
Sbjct: 365 DVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMP 424

Query: 437 EEQVPATEVTYSSVLRACASLAALEPGMQV-HCLTVKANYDMDVVVANALIDMYAKCGSI 495
                  +VT  ++L AC+    LE G+++   +  K      V   +  +DM  + G +
Sbjct: 425 SSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQV 484

Query: 496 TDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
             A  L+  M    +   W A++     H
Sbjct: 485 DKAMELIESMTIKPDATVWGALLGACKTH 513



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 102/427 (23%), Positives = 194/427 (45%), Gaps = 51/427 (11%)

Query: 49  FSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLP 108
           + + E N  S+       I +  +  A  ++  +  K    D+ A+  ++    +  R+ 
Sbjct: 134 WRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVK----DVVASTNMIGGLCREGRVD 189

Query: 109 DATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFL---- 164
           +A  +FDEM ERN +++ T I GY  +++   A  LF  +     E    ++T+ L    
Sbjct: 190 EARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMP----EKTEVSWTSMLLGYT 245

Query: 165 ---KVLVSMGWAELCPC--VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF 219
              ++  +  + E+ P   V AC              A+I  F   G +  AR+VFD L 
Sbjct: 246 LSGRIEDAEEFFEVMPMKPVIAC-------------NAMIVGFGEVGEISKARRVFD-LM 291

Query: 220 ND----------------CFE-EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAK 262
            D                 FE EAL+ F+QM+  G +P+  +   +L  C  L +++  +
Sbjct: 292 EDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGR 351

Query: 263 SAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTD 322
             H   ++  ++ D+YVA  L+ +Y K GE+  A+ +F+    KD+I W+ +I+ YA   
Sbjct: 352 QVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHG 411

Query: 323 LSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI-HSLVVRVGLLSDVFVS 381
           L  +A+++F  M  +   PN+ T +++L AC+    L+ G +I  S+  +  +   V   
Sbjct: 412 LGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHY 471

Query: 382 NALMDVYAKCGRMENSVELFAE-SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQV 440
           +  +D+  + G+++ ++EL    + K +   W  ++        +  A +   K+ E + 
Sbjct: 472 SCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENE- 530

Query: 441 PATEVTY 447
           P    TY
Sbjct: 531 PDNAGTY 537



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 85/340 (25%), Positives = 147/340 (43%), Gaps = 64/340 (18%)

Query: 288 TKSGEISNARR-------------------------------IFEEMPKKDVIPWSFMIA 316
           ++ G+I+ AR+                               +F+EM +++V+ W+ +++
Sbjct: 28  SRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVS 87

Query: 317 RYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL------GNQIHSLVV 370
            Y +  + ++A  +F  M +  V          +Q     E   L       N++   V+
Sbjct: 88  GYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVM 147

Query: 371 RVGLLSDVFVSNA--------LMDVYA---------KCGRMENSVELFAESPKRNHVTWN 413
             GL+ D  +  A        + DV A         + GR++ +  +F E  +RN VTW 
Sbjct: 148 FGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWT 207

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ-VHCLTVK 472
           TMI GY Q   V  A  +F  M E+    TEV+++S+L        +E   +    + +K
Sbjct: 208 TMITGYRQNNRVDVARKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVMPMK 263

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
                 V+  NA+I  + + G I+ AR VFD+M D +  +W  MI  Y   G   E L +
Sbjct: 264 P-----VIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDL 318

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
           F  MQ++G RP+  + + +LS C+    L+ G      +V
Sbjct: 319 FAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLV 358



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/276 (22%), Positives = 121/276 (43%), Gaps = 57/276 (20%)

Query: 382 NALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYV--------------------- 420
           N+++  Y   G  + + +LF E  +RN V+WN ++ GY+                     
Sbjct: 52  NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV 111

Query: 421 ----------QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLT 470
                     Q G VG+A  +F +M E      EV+++ +         ++   ++    
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRMPERN----EVSWTVMFGGLIDDGRIDKARKL---- 163

Query: 471 VKANYDM----DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLS 526
               YDM    DVV +  +I    + G + +ARL+FD M + N V+W  MI+GY  +   
Sbjct: 164 ----YDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRV 219

Query: 527 AEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTS 586
               K+F++M ++      +++  +L   +  G +E  E +F+ M     ++P I    +
Sbjct: 220 DVARKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVM----PMKPVIA-CNA 270

Query: 587 MVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           M+   G  G + KA ++ + +  + +   WR ++ A
Sbjct: 271 MIVGFGEVGEISKARRVFDLMEDRDNA-TWRGMIKA 305



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 9/141 (6%)

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
           N+++  Y   G   +AR +FD M++ N VSWN ++SGY  + +  E   VF+LM +R   
Sbjct: 52  NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPER--- 108

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
            N +++  ++      G++ + E+ F  M     +      +T M   L   G +DKA K
Sbjct: 109 -NVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVS-----WTVMFGGLIDDGRIDKARK 162

Query: 603 LIEGIPFQPSVMIWRALLGAC 623
           L + +P +  V     + G C
Sbjct: 163 LYDMMPVKDVVASTNMIGGLC 183



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 10/148 (6%)

Query: 486 IDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNN 545
           I   ++ G I +AR  FD +      SWN+++SGY  +GL  E  ++FD M +R    N 
Sbjct: 24  ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSER----NV 79

Query: 546 LTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
           +++ G++S      ++ +    F+ M      E  +  +T+MV    + G + +A  L  
Sbjct: 80  VSWNGLVSGYIKNRMIVEARNVFELMP-----ERNVVSWTAMVKGYMQEGMVGEAESLFW 134

Query: 606 GIPFQPSVMIWRALLGACIIHNNVEIGR 633
            +P +  V  W  + G  I    ++  R
Sbjct: 135 RMPERNEVS-WTVMFGGLIDDGRIDKAR 161


>gi|302818616|ref|XP_002990981.1| hypothetical protein SELMODRAFT_132724 [Selaginella moellendorffii]
 gi|300141312|gb|EFJ08025.1| hypothetical protein SELMODRAFT_132724 [Selaginella moellendorffii]
          Length = 578

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 220/582 (37%), Positives = 335/582 (57%), Gaps = 21/582 (3%)

Query: 240 PNNFTFAFVLKAC---LGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNA 296
           PN+ T+  +L AC     +DTIR    A G       E+D+ VA A+++ Y K G++ +A
Sbjct: 2   PNDVTYVAILGACGHPWEVDTIRARVEACGS-----LELDVIVATAVMNAYGKCGDLDSA 56

Query: 297 RRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM 356
           R +F+ +  +D   W+ MI+     +   +A+EL  +MR   V P++ T V+ L AC   
Sbjct: 57  RGLFDRILVRDAAVWNAMISLLVVHEQGDEALELCRQMRLDGVTPSKGTCVAALNACCHS 116

Query: 357 EGLDLGNQIHSLVVRVGLLSDVFVSNALMDV-YAKCGRMENSVELFAESPKRNHVTWNTM 415
                G +IH+    +G  +D  V  AL+++ YA+ G +E++ E+F     RN ++W  M
Sbjct: 117 RDFSEGLRIHAFARELGGDADTVVQTALVNIMYARLGSLEDAREIFDAMTTRNVISWTAM 176

Query: 416 IVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY 475
           +  + QLG   +A+ +F  +L E V   +VT+++VL A  +LA++     V     +  +
Sbjct: 177 VGVHSQLGLNREALRIFRSILLEGVTPNDVTFTAVLNASGNLASIRAAKLVQACLSETGF 236

Query: 476 DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDL 535
             +V VAN L+    KCGS+ +    F +M   N+VSWN+ I+  + HG     +++F  
Sbjct: 237 LGNVEVANGLLCALGKCGSLEEVAKFFRVMPVQNQVSWNSAIAANAQHGNGVRGVELFQT 296

Query: 536 MQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAG 595
           MQ  G    ++T +GVLS+CS+ GL+ QG +YF +M  +YG+    EHY+ ++ LL RAG
Sbjct: 297 MQLEGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLNMHVDYGLPAEAEHYSCVIDLLSRAG 356

Query: 596 HLDKAAKLIEGIPF-QPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLS 654
            L+ A + ++ +PF   SV  W  LL  C +H ++E G  + Q IL   P     ++++ 
Sbjct: 357 WLEHAEEFVKRLPFGDESVFPWITLLCGCKLHGDLERGGRATQRILGLNPGSTGPYLVMH 416

Query: 655 NIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLE 703
           N+YA A  W +AA+           KEPGLSWIE +G +H FR GDTSH   + I   LE
Sbjct: 417 NLYAGAGKWPEAAAVRKSMVDLGPKKEPGLSWIEVKGRIHEFRVGDTSHPRSSEIHRELE 476

Query: 704 WLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLR 763
            LN K ++AG++ D  AV+ D++  EKE  L  HSEKLA+AF L       P+RI+KNLR
Sbjct: 477 RLNDKMKRAGFVCDTKAVVYDLQAKEKESLLCQHSEKLAIAFGLISTAAGEPLRIMKNLR 536

Query: 764 ICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +C DCH+A K IS +V REI++RD +RFHHF+ G CSC DFW
Sbjct: 537 VCSDCHSATKFISGLVGREIVVRDAYRFHHFRGGACSCEDFW 578



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 151/351 (43%), Gaps = 22/351 (6%)

Query: 89  LDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTL 148
           LD+     ++N Y K   L  A  LFD +  R+   +   I    V  Q  EA+ L   +
Sbjct: 35  LDVIVATAVMNAYGKCGDLDSARGLFDRILVRDAAVWNAMISLLVVHEQGDEALELCRQM 94

Query: 149 HREGHELNPFAFTAFLKVLV-SMGWAELCPCVFACVYKLGHDSNAFVGTALID-AFSVCG 206
             +G   +     A L     S  ++E    + A   +LG D++  V TAL++  ++  G
Sbjct: 95  RLDGVTPSKGTCVAALNACCHSRDFSEGLR-IHAFARELGGDADTVVQTALVNIMYARLG 153

Query: 207 CVEFARKVFDGLFNDCF----------------EEALNFFSQMRAVGFKPNNFTFAFVLK 250
            +E AR++FD +                      EAL  F  +   G  PN+ TF  VL 
Sbjct: 154 SLEDAREIFDAMTTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVTPNDVTFTAVLN 213

Query: 251 ACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIP 310
           A   L +IR AK    C  +T +  ++ VA  LL    K G +    + F  MP ++ + 
Sbjct: 214 ASGNLASIRAAKLVQACLSETGFLGNVEVANGLLCALGKCGSLEEVAKFFRVMPVQNQVS 273

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLV 369
           W+  IA  AQ    +  VELF  M+   +     T + VL +C+    +  G +   ++ 
Sbjct: 274 WNSAIAANAQHGNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLNMH 333

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP--KRNHVTWNTMIVG 418
           V  GL ++    + ++D+ ++ G +E++ E     P    +   W T++ G
Sbjct: 334 VDYGLPAEAEHYSCVIDLLSRAGWLEHAEEFVKRLPFGDESVFPWITLLCG 384



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 108/279 (38%), Gaps = 38/279 (13%)

Query: 62  SLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNV-YVKLNRLPDATKLFDEMPER 120
           +L +C  + D    + IH    + G   D      L+N+ Y +L  L DA ++FD M  R
Sbjct: 109 ALNACCHSRDFSEGLRIHAFARELGGDADTVVQTALVNIMYARLGSLEDAREIFDAMTTR 168

Query: 121 NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVF 180
           N IS+   +  ++      EA+ +F ++  EG   N   FTA L    ++        V 
Sbjct: 169 NVISWTAMVGVHSQLGLNREALRIFRSILLEGVTPNDVTFTAVLNASGNLASIRAAKLVQ 228

Query: 181 ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCFE--------- 224
           AC+ + G   N  V   L+ A   CG +E   K F  +       +N             
Sbjct: 229 ACLSETGFLGNVEVANGLLCALGKCGSLEEVAKFFRVMPVQNQVSWNSAIAANAQHGNGV 288

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL- 283
             +  F  M+  G    + T   VL +C           A   A    Y ++++V   L 
Sbjct: 289 RGVELFQTMQLEGIDTGSVTLIGVLSSC---------SHAGLVAQGYSYFLNMHVDYGLP 339

Query: 284 ---------LDLYTKSGEISNARRIFEEMPKKD--VIPW 311
                    +DL +++G + +A    + +P  D  V PW
Sbjct: 340 AEAEHYSCVIDLLSRAGWLEHAEEFVKRLPFGDESVFPW 378


>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
 gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
          Length = 611

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 223/605 (36%), Positives = 347/605 (57%), Gaps = 19/605 (3%)

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDT--IRVAKSAHGCALKTCYEMDL 277
           N C  EAL FF +M   G +P+  TF+ +L A   +    I   +  H  A  +    ++
Sbjct: 7   NGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPNV 66

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM--R 335
            V  A++ +Y K G + +AR  FEE+  K+ + W+ M+  Y       +A+ELF  M  R
Sbjct: 67  VVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMCER 126

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG--LLSDVFVSNALMDVYAKCGR 393
                P++F+F   ++AC+ +E L+ G +IH ++ R G  L  DV V  AL+++Y+KCG 
Sbjct: 127 SRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSKCGD 186

Query: 394 MENSVELFAE-SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE-QVPATEVTYSSVL 451
           +E + ++F       + V WN MI  Y Q G   +A+ ++  M +   +   + T+ +V+
Sbjct: 187 LEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVI 246

Query: 452 RACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEV 511
             CA L+AL+ G  +H      N+D +++V+NAL+ MY KCG + +A  VF  M   +E+
Sbjct: 247 DVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEI 306

Query: 512 SWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSM 571
           SWN +IS Y+ HG S + L ++  M  +G +P  +TFVG+LSACS+GGL+  G  YF  M
Sbjct: 307 SWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFYRM 366

Query: 572 VANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEI 631
             ++ I+P + H+  ++ LLGR G L +A  +++ +P Q + + W +LLGAC  H +++ 
Sbjct: 367 QDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDLKR 426

Query: 632 GRLSAQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQG 680
           G  +A  ++D  P     +VLLSNIYA A  W+           +   K PG SWIE   
Sbjct: 427 GVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKSWIEIGD 486

Query: 681 MVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEK 740
           +VH F +GD SH     I   L  +  + +  GY+PD S+V  D+ E+EKE  L  HSEK
Sbjct: 487 VVHEFVSGDRSHPQGEEIYVELGKMVEEMKGLGYVPDTSSVFHDLEEEEKEDLLVCHSEK 546

Query: 741 LALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCS 800
           LA+ +    +P  S +RI+KNLR+C+DCHTA K +S+I  R+I++RD  RFH F++G CS
Sbjct: 547 LAIVYGNMVVPGKSMLRIVKNLRVCLDCHTATKFMSRITGRKIVVRDAARFHLFENGSCS 606

Query: 801 CGDFW 805
           C D+W
Sbjct: 607 CRDYW 611



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 98/409 (23%), Positives = 181/409 (44%), Gaps = 43/409 (10%)

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
           +     IH      G   ++     ++++Y K  RL DA   F+E+  +N++++   +  
Sbjct: 47  IDQGREIHRYARISGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTN 106

Query: 132 YTVSSQFVEAVGLFSTLHREGHELNP--FAFTAFLKVLVSMGWAELCPCVFACVYKLGHD 189
           Y +  +  EA+ LF  +        P  F+F+  ++   ++   E    +   + + G +
Sbjct: 107 YKLDGRDREALELFREMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKE 166

Query: 190 --SNAFVGTALIDAFSVCGCVEFARKVFDGLFND----CF-------------EEALNFF 230
              +  VGTAL++ +S CG +E ARKVFD + +D    C+             ++AL+ +
Sbjct: 167 LHKDVVVGTALLNMYSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLY 226

Query: 231 SQMR-AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK 289
             M       P   TF  V+  C  L  ++  ++ H     T ++ +L V+ AL+ +Y K
Sbjct: 227 RSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGK 286

Query: 290 SGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSV 349
            G +  A  +F  M  KD I W+ +I+ YA    S  A+ L+  M    V P + TFV +
Sbjct: 287 CGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGL 346

Query: 350 LQACA----TMEGLDL------GNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
           L AC+      +GLD        ++I   V   G          ++D+  + GR+  +  
Sbjct: 347 LSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFG---------CIIDLLGRGGRLAEAEL 397

Query: 400 LFAESP-KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTY 447
           +    P + N V W +++      G++ K  +  +  + ++VP T   Y
Sbjct: 398 VLKSMPIQANAVQWMSLLGACKTHGDL-KRGVRAADQVVDRVPWTSGGY 445



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 83/377 (22%), Positives = 147/377 (38%), Gaps = 90/377 (23%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCL--DLFATNVLLNVYVKLNRLPDATKLFD 115
           S++ ++++C   +DL+    IH  + ++G  L  D+     LLN+Y K   L +A K+FD
Sbjct: 136 SFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSKCGDLEEARKVFD 195

Query: 116 EMP-ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNP--FAFTAFLKVLVSMGW 172
            +  + +++ +   I  Y    +  +A+ L+ ++H +  +L P    F   + V   +  
Sbjct: 196 SIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMH-DTTDLAPKQGTFVTVIDVCAELSA 254

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------------- 218
            +    + A V     D+N  V  AL+  +  CGC++ A  VF  +              
Sbjct: 255 LKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIISS 314

Query: 219 --FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL-------GLDTIRVAKSAH---- 265
             ++   ++AL  + +M   G KP   TF  +L AC        GLD     +  H    
Sbjct: 315 YAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFYRMQDDHRIKP 374

Query: 266 -----GCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQ 320
                GC               ++DL  + G ++ A  + + MP                
Sbjct: 375 SVPHFGC---------------IIDLLGRGGRLAEAELVLKSMP---------------- 403

Query: 321 TDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV-RVGLLSDVF 379
                             +  N   ++S+L AC T   L  G +    VV RV   S  +
Sbjct: 404 ------------------IQANAVQWMSLLGACKTHGDLKRGVRAADQVVDRVPWTSGGY 445

Query: 380 VSNALMDVYAKCGRMEN 396
           V   L ++YA  GR ++
Sbjct: 446 V--LLSNIYAAAGRWKD 460



 Score = 41.2 bits (95), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 4/106 (3%)

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL--SACSNGGLLEQGEAYFKSMVAN 574
           ++ +S +G  +E L  F  M Q G RP+ +TF  +L   A      ++QG    +    +
Sbjct: 1   MAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARIS 60

Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
            G+ P +   T+++S+ G+ G LD A    E + ++ SV  W A++
Sbjct: 61  -GLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSV-TWNAMM 104


>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Vitis vinifera]
          Length = 650

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 218/582 (37%), Positives = 330/582 (56%), Gaps = 41/582 (7%)

Query: 265 HGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLS 324
           H   ++  +  D ++   LL   +K   I  A RIF+     +V  ++ +I  +  +   
Sbjct: 69  HAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNY 128

Query: 325 IDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNAL 384
            DA++L+ RM    + P+ +   S+L+AC +   L  G ++HS  +++GL S+  V   +
Sbjct: 129 FDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRI 188

Query: 385 MDVYAKCGRMENSVELFAESP------------------------------KRNHVTWNT 414
           M++Y KCG + ++  +F E P                              +++ V W  
Sbjct: 189 MELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTA 248

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
           MI G+V+  E+ +A+  F  M  E V   E T   VL AC+ L ALE G  VH    K  
Sbjct: 249 MIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFE 308

Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
            ++++ V NALI+MY++CGSI +A+ VFD M D + +++N MISG SM+G S + +++F 
Sbjct: 309 IELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFR 368

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
           +M  R  RP N+TFVGVL+ACS+GGL++ G   F SM  +YG+EP IEHY  MV LLGR 
Sbjct: 369 VMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRV 428

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLS 654
           G L++A  LI  +   P  ++   LL AC +H N+E+G   A+ + D    D  T+VLLS
Sbjct: 429 GRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLS 488

Query: 655 NIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLE 703
           ++YA +  W++AA            KEPG S IE    +H F  GD  H     I   LE
Sbjct: 489 HVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPRKERIYEKLE 548

Query: 704 WLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLR 763
            LN   R  GY P+   VL+D+ + EKE  L +HSE+LA+ + L    P + IR++KNLR
Sbjct: 549 ELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAIHSERLAICYGLISTEPCTVIRVMKNLR 608

Query: 764 ICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +C DCH+AIK+I+KI +R++++RD +RFH+F++G CSCGD+W
Sbjct: 609 VCYDCHSAIKLIAKITRRKVVVRDRNRFHYFENGACSCGDYW 650



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 115/435 (26%), Positives = 203/435 (46%), Gaps = 54/435 (12%)

Query: 135 SSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFV 194
           S    + + + + L R GH  +PF     L+        +    +F    +  H+ N ++
Sbjct: 59  SKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIF----QYTHNPNVYL 114

Query: 195 GTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLG 254
            TALID F   G        FD         A+  +S+M      P+N+  A +LKAC  
Sbjct: 115 YTALIDGFVSSG------NYFD---------AIQLYSRMLHDSILPDNYLMASILKACGS 159

Query: 255 LDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP---------- 304
              +R  +  H  ALK     +  V + +++LY K GE+ +ARR+FEEMP          
Sbjct: 160 QLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMI 219

Query: 305 --------------------KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
                               +KD + W+ MI  + + +    A+E F  M+   V PN+F
Sbjct: 220 SSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEF 279

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           T V VL AC+ +  L++G  +HS + +  +  ++FV NAL+++Y++CG ++ +  +F E 
Sbjct: 280 TIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEM 339

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
             R+ +T+NTMI G    G+  +A+ +F  M+  ++  T VT+  VL AC+    ++ G 
Sbjct: 340 KDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGF 399

Query: 465 QV-HCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSM 522
           ++ H +T     +  +     ++D+  + G + +A  L+  M    + +    ++S   M
Sbjct: 400 KIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKM 459

Query: 523 HG---LSAEVLKVFD 534
           H    L  +V KV +
Sbjct: 460 HKNLELGEQVAKVLE 474



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 125/508 (24%), Positives = 210/508 (41%), Gaps = 79/508 (15%)

Query: 30  AQAALSTQQCSNSTTT---PITFS----VSEFNSHSYATSLQSCIQ---------NDDLQ 73
           AQ   ST  C  ++ T    + FS        NS+S   SL+S  Q         +  + 
Sbjct: 4   AQLGNSTMPCPYASMTFAASLPFSGPSPKPHPNSNSNPKSLKSLDQKQIISLLQRSKHIN 63

Query: 74  TAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYT 133
             + IH Q+++ G+  D F    LL    K + +  A+++F      N   +   I G+ 
Sbjct: 64  QVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFV 123

Query: 134 VSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAF 193
            S  + +A+ L+S +  +    + +   + LK   S         V +   KLG  SN  
Sbjct: 124 SSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRL 183

Query: 194 VGTALIDAFSVCGCVEFARKVF-------------------------------------- 215
           V   +++ +  CG +  AR+VF                                      
Sbjct: 184 VRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDT 243

Query: 216 -------DGLF-NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGC 267
                  DG   N+    AL  F  M+    +PN FT   VL AC  L  + + +  H  
Sbjct: 244 VCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSY 303

Query: 268 ALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDA 327
             K   E++L+V  AL+++Y++ G I  A+ +F+EM  +DVI ++ MI+  +    S  A
Sbjct: 304 MRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQA 363

Query: 328 VELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI-HSLVVRVGLLSDVFVSNALMD 386
           +ELF  M    + P   TFV VL AC+    +D G +I HS+    G+   +     ++D
Sbjct: 364 IELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVD 423

Query: 387 VYAKCGRMENSVELFAE---SPKRNHVTWNTMIVG-----YVQLGEVGKAMIMFSKMLEE 438
           +  + GR+E + +L      +P  +H+   T++        ++LGE        +K+LE+
Sbjct: 424 LLGRVGRLEEAYDLIRTMKMTP--DHIMLGTLLSACKMHKNLELGE------QVAKVLED 475

Query: 439 QVPATEVTYSSVLRACASLAALEPGMQV 466
           +  A   TY  +    AS    +   QV
Sbjct: 476 RGQADSGTYVLLSHVYASSGKWKEAAQV 503



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 124/271 (45%), Gaps = 31/271 (11%)

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
           IH+ ++R G   D F+   L+   +KC  ++ +  +F  +   N   +  +I G+V  G 
Sbjct: 68  IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 127

Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA 484
              A+ ++S+ML + +       +S+L+AC S  AL  G +VH   +K     + +V   
Sbjct: 128 YFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLR 187

Query: 485 LIDMYAKCGSITDARLVFDMMND------------------------------WNEVSWN 514
           ++++Y KCG + DAR VF+ M +                               + V W 
Sbjct: 188 IMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWT 247

Query: 515 AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
           AMI G+  +      L+ F  MQ    RPN  T V VLSACS  G LE G  +  S +  
Sbjct: 248 AMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGR-WVHSYMRK 306

Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
           + IE  +    +++++  R G +D+A  + +
Sbjct: 307 FEIELNLFVGNALINMYSRCGSIDEAQTVFD 337


>gi|302798306|ref|XP_002980913.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
 gi|300151452|gb|EFJ18098.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
          Length = 809

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 257/797 (32%), Positives = 390/797 (48%), Gaps = 52/797 (6%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLD-------LFATNVLLNVYVKLNRLPDA 110
           SYA  L+ C +  DL     +H Q+ + G  LD        F  N L+ +Y K  R  +A
Sbjct: 16  SYARLLKECGRLGDLAHGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEA 75

Query: 111 TKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSM 170
            + FD +  +N  S+ + +  Y  +    +A+  F  + + G E +   F A L V   +
Sbjct: 76  QRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGIL 135

Query: 171 GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------- 219
              E    +   +     DS+  +G AL+  +  CG ++ A+++FD L            
Sbjct: 136 KRLEDGAGIHRQIQDKLLDSDLEIGNALVSMYGKCGRLDLAKQLFDCLEMKNVISWTILV 195

Query: 220 -----NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTI-RVAKSAHGCALKTCY 273
                N    E       M   G KP+      +L  C     +   +  AH   + +  
Sbjct: 196 SVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGSGL 255

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMP--KKDVIP-WSFMIARYAQTDLSIDAVEL 330
           + +  VA ALL ++ + G +  AR IFE++      VI  W+ MI  YA    S +A+ L
Sbjct: 256 DREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFL 315

Query: 331 FCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAK 390
              ++   V PN  TF+S L AC++++    G  +H L+   G   +V V+NAL+ +Y +
Sbjct: 316 LDSLQLQGVKPNCITFISSLGACSSLQD---GRALHLLIDESGFDREVSVANALVTMYGR 372

Query: 391 CGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ-VPATEVTYSS 449
           CG + +S +LF+E  +++  +WN+ I  +   G   + + +  +M  E  +  + VT  +
Sbjct: 373 CGSLLDSAKLFSEMAEKDLASWNSAIAAHAYHGRSDECIKLLDQMRGEGGLEPSSVTLVT 432

Query: 450 VLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWN 509
            + AC  LA      +VH    +   + +  VAN L+DMY K G +  AR +FD     N
Sbjct: 433 AMSACGGLADPSSSKRVHERARELGLESETCVANGLVDMYGKAGDVDTARYIFDRALRRN 492

Query: 510 EVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFK 569
             +WNAM   Y   G++  VL +   MQ+ G+RP+++TFV +LS C + GLLE+    F 
Sbjct: 493 VTTWNAMAGAYRQCGVTRGVLWLVRTMQRDGYRPDSVTFVSLLSVCGHSGLLEEARYNFV 552

Query: 570 SMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQP--SVMIWRALLGACIIHN 627
           +M   +GI+P  +HY+ ++ LL RAG L +A   I  I      S  +W ALLGAC    
Sbjct: 553 AMRREFGIDPSPKHYSCVIDLLARAGELQQAEDFIARISVSSPASSPMWMALLGACRSLG 612

Query: 628 NVEIGRL----SAQHILDFEPEDE----ATHVLLSNIYAMARSWEKAAS----------- 668
           +          +A  +   EP  +    A HV L+NI A + +W++A S           
Sbjct: 613 DSSSRARRAARNAMDVEKMEPRSQHDPSAAHVALANICAASGNWDEALSIRKAMAEKGLR 672

Query: 669 KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVRED 728
           KEPG S I  +  +H F AGD  H     I   L  L       GY+ D   V  +V E 
Sbjct: 673 KEPGRSLIAVKNRLHEFVAGDRDHPRREEIYAELRRLERAMVDRGYVVDTGMVTHNVGEA 732

Query: 729 EKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDV 788
           +K   L  HSEKLA+AF +   PP S +RIIKNLR C DCHTAIK+IS I  REI++RD 
Sbjct: 733 DKRDLLGCHSEKLAVAFGVLSTPPGSSLRIIKNLRACGDCHTAIKLISAIEGREIVVRDS 792

Query: 789 HRFHHFQDGCCSCGDFW 805
           +RFHHF++G CSCGD+W
Sbjct: 793 NRFHHFRNGSCSCGDYW 809


>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 866

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 246/759 (32%), Positives = 385/759 (50%), Gaps = 31/759 (4%)

Query: 73  QTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGY 132
           +    ++   L   N L +   N  L ++V+   L DA  +F +M ERN  S+   + GY
Sbjct: 111 EEGSKVYSVALSSMNSLSVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGY 170

Query: 133 TVSSQFVEAVGLF-STLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSN 191
                F EA+ L+   L   G + + + F   L+    +        V   V + G++ +
Sbjct: 171 AKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELD 230

Query: 192 AFVGTALIDAFSVCGCVEFARKVFD---------------GLF-NDCFEEALNFFSQMRA 235
             V  ALI  +  CG V+ AR +FD               G F N    E L  F  MR 
Sbjct: 231 IDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRG 290

Query: 236 VGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISN 295
           +   P+  T   V+ AC  L   R+ +  H   + T + +D+ V  +L  +Y  +G    
Sbjct: 291 LSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWRE 350

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACAT 355
           A ++F  M  KD++ W+ MI+ Y    L   A++ +  M Q  V P++ T  +VL ACAT
Sbjct: 351 AEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACAT 410

Query: 356 MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTM 415
           +  LD G ++H L ++  L+S V V+N L+++Y+KC  ++ ++++F   P++N ++W ++
Sbjct: 411 LGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSI 470

Query: 416 IVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY 475
           I G        +A+I F +M     P   +T ++ L ACA + AL  G ++H   ++   
Sbjct: 471 IAGLRLNNRCFEALIFFRQMKMTLQP-NAITLTAALAACARIGALMCGKEIHAHVLRTGV 529

Query: 476 DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDL 535
            +D  + NAL+DMY +CG +  A   F+     +  SWN +++GYS  G  + V+++FD 
Sbjct: 530 GLDDFLPNALLDMYVRCGRMNIAWNQFNSQKK-DVSSWNILLTGYSERGQGSVVVELFDR 588

Query: 536 MQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAG 595
           M +   RP+ +TF+ +L  C    ++ QG  YF  M   YG+ P ++HY  +V LLGRAG
Sbjct: 589 MVKARVRPDEITFISLLCGCGKSQMVRQGLMYFSKM-EEYGVTPNLKHYACVVDLLGRAG 647

Query: 596 HLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSN 655
            L +A K I+ +P  P   +W ALL AC IH+N+++G LSAQ I + +      ++LL N
Sbjct: 648 ELQEAHKFIQKMPVTPDPAVWGALLNACRIHHNIDLGELSAQRIFELDKGSVGYYILLCN 707

Query: 656 IYAMARSWEKAAS-----KEPGL------SWIENQGMVHYFRAGDTSHADMNIIRGMLEW 704
           +YA    W + A      KE GL      SW+E +G VH F + D  H     I  +L+ 
Sbjct: 708 LYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLDG 767

Query: 705 LNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRI 764
              K  + G      +   D  E  ++     HSE+ A+AF L    P  PI + KNL +
Sbjct: 768 FYEKMSEVGLTTSSESSSMDETEISRDEIFCGHSERKAIAFGLINSVPGMPIWVTKNLNM 827

Query: 765 CVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGD 803
           C  CH  +K ISK V+REI +RD   FHHF+DG CSCGD
Sbjct: 828 CESCHDTVKFISKTVRREISVRDSEHFHHFKDGECSCGD 866



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/409 (26%), Positives = 202/409 (49%), Gaps = 3/409 (0%)

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           N   EEA+   + M+ +    +   F  +++ C            +  AL +   + + +
Sbjct: 72  NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVEL 131

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ-AF 338
             A L ++ + G + +A  +F +M ++++  W+ ++  YA+     +A+ L+ RM     
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGG 191

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           V P+ +TF  VL+ C  +  L  G ++H  VVR G   D+ V NAL+ +Y KCG ++++ 
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            LF   P+R+ ++WN MI GY + G   + + +F  M    V    +T +SV+ AC  L 
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLG 311

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
               G  +H   +   + +D+ V N+L  MY   GS  +A  +F  M+  + VSW  MIS
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMIS 371

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           GY  + L  + +  + +M Q   +P+ +T   VLSAC+  G L+ G    K  +    I 
Sbjct: 372 GYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLIS 431

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
             I    +++++  +   +DKA  +   IP + +V+ W +++    ++N
Sbjct: 432 YVIVA-NNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLRLNN 478


>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
 gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
          Length = 619

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 221/605 (36%), Positives = 331/605 (54%), Gaps = 57/605 (9%)

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSF 313
           G ++++  K  H   L+   + D Y+   +L      G  + + RIF +  + ++  ++ 
Sbjct: 19  GFNSLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNT 78

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
           MI      D   +++E++  MR+  ++P+ FTF  +L+ACA +    LG ++H LVV+ G
Sbjct: 79  MIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAG 138

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
             SD FV+ +L+ +Y KCG ++N+ ++F + P++N   W  +I GY+ +G+  +A+ MF 
Sbjct: 139 CESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFR 198

Query: 434 K-------MLEEQVPATEVTYSS-----------------------------------VL 451
           +       MLE+ +    V++SS                                   VL
Sbjct: 199 RACSVFDGMLEKDI----VSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVL 254

Query: 452 RACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEV 511
            ACA L ALE G     L  +  +  + V+  ALIDMYAKCG +  A  VF  M   + V
Sbjct: 255 CACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIV 314

Query: 512 SWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSM 571
            WNA ISG +M G       +F  M++ G  P+  TFVG+L AC++ GL+++G  YF SM
Sbjct: 315 VWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSM 374

Query: 572 VANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEI 631
              + + P IEHY  MV LLGRAG LD+A +L++ +P + + ++W ALLG C +H + ++
Sbjct: 375 ERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQL 434

Query: 632 GRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQG 680
                + ++  EP +   +VLLSNIY+ +  WE AA            K PG SWIE  G
Sbjct: 435 VEGVLKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDG 494

Query: 681 MVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEK 740
           +VH F  GDTSH     I   L  L    + +GY+P    VL D+ E+EKE ++  HSEK
Sbjct: 495 VVHEFLVGDTSHPLSEKIYAKLGELVKDLKASGYVPTTDYVLFDIEEEEKEHFIGCHSEK 554

Query: 741 LALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCS 800
           LA+AF L    P+  IR++KNLR+C DCH AIK IS+   REII+RD +RFH F DG CS
Sbjct: 555 LAIAFGLISTAPNDKIRVVKNLRVCGDCHEAIKHISRFTGREIIVRDNNRFHCFNDGSCS 614

Query: 801 CGDFW 805
           C D+W
Sbjct: 615 CKDYW 619



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 125/476 (26%), Positives = 217/476 (45%), Gaps = 60/476 (12%)

Query: 161 TAFLKVLVSMGWAEL--CPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-- 216
           +A +K+ +  G+  L     V A + +LG D ++++   ++      G   ++ ++F   
Sbjct: 9   SAHIKIRLFQGFNSLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQT 68

Query: 217 -------------GL-FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAK 262
                        GL  ND F+E++  +  MR  G  P++FTF F+LKAC  L   ++  
Sbjct: 69  KEPNIFLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGI 128

Query: 263 SAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP------------------ 304
             HG  +K   E D +V  +L+ LY K G I NA ++F+++P                  
Sbjct: 129 KLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVG 188

Query: 305 --------------------KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
                               +KD++ WS MI  YA   L  +A++LF +M      P+ +
Sbjct: 189 KCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCY 248

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
             V VL ACA +  L+LGN   +L+ R   L +  +  AL+D+YAKCGRM+++ E+F   
Sbjct: 249 AMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGM 308

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
            K++ V WN  I G    G V  A  +F +M +  +     T+  +L AC     ++ G 
Sbjct: 309 RKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGR 368

Query: 465 Q-VHCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSM 522
           Q  + +        ++     ++D+  + G + +A +LV  M  + N + W A++ G  +
Sbjct: 369 QYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRL 428

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           H  +  V  V  L Q     P+N     +LS   +     +  A  +S+++  GI+
Sbjct: 429 HRDTQLVEGV--LKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIK 482



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/405 (22%), Positives = 173/405 (42%), Gaps = 56/405 (13%)

Query: 70  DDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTI 129
           + L+    +H  +L+ G   D +  N +L           + ++F +  E N   F T I
Sbjct: 21  NSLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMI 80

Query: 130 QGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHD 189
            G  ++  F E++ ++ ++ +EG   + F F   LK    +  ++L   +   V K G +
Sbjct: 81  HGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCE 140

Query: 190 SNAFVGTALIDAFSVCGCVEFARKVFDGL------------------------------- 218
           S+AFV T+L+  +  CG ++ A KVFD +                               
Sbjct: 141 SDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRA 200

Query: 219 ---FNDCFEE--------------------ALNFFSQMRAVGFKPNNFTFAFVLKACLGL 255
              F+   E+                    AL+ F +M   GF+P+ +    VL AC  L
Sbjct: 201 CSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARL 260

Query: 256 DTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMI 315
             + +   A     +  +  +  +  AL+D+Y K G + +A  +F  M KKD++ W+  I
Sbjct: 261 GALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAI 320

Query: 316 ARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLL 375
           +  A +     A  LF +M ++ + P+  TFV +L AC     +D G Q  + + RV  L
Sbjct: 321 SGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTL 380

Query: 376 S-DVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMIVG 418
           + ++     ++D+  + G ++ + +L    P + N + W  ++ G
Sbjct: 381 TPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGG 425



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 83/364 (22%), Positives = 139/364 (38%), Gaps = 97/364 (26%)

Query: 47  ITFSVSEFNSHSYATSLQSCIQNDDLQTAMTI---------------------------- 78
           I     E N   + T +   + ND  Q ++ I                            
Sbjct: 64  IFHQTKEPNIFLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLD 123

Query: 79  -------HCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
                  H  V+K G   D F    L+++Y K   + +A K+FD++PE+N  ++   I G
Sbjct: 124 SKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISG 183

Query: 132 YTVSSQFVEAVGLF--------STLHR---------EGHELNPF---AFTAFLKVLVSMG 171
           Y    +  EA+ +F          L +         +G+  N     A   F K+L + G
Sbjct: 184 YIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKML-NEG 242

Query: 172 W--------AELCPCVFACVYKLGH------DSNAF-----VGTALIDAFSVCGCVEFAR 212
           +          LC C      +LG+      D N F     +GTALID ++ CG ++ A 
Sbjct: 243 FRPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAW 302

Query: 213 KVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL--G 254
           +VF G+                 +   + A   F QM   G +P+  TF  +L AC   G
Sbjct: 303 EVFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAG 362

Query: 255 L-DTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWS 312
           L D  R   ++         E++ Y    ++DL  ++G +  A ++ + MP + + I W 
Sbjct: 363 LVDEGRQYFNSMERVFTLTPEIEHY--GCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWG 420

Query: 313 FMIA 316
            ++ 
Sbjct: 421 ALLG 424


>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 211/534 (39%), Positives = 309/534 (57%), Gaps = 19/534 (3%)

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           +L  Y +S  +  A   F +MP KD+  W+ +I+ +AQ      A +LF  M +     N
Sbjct: 142 MLVCYLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEK----N 197

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
             ++ +++        L+   +++     VG+ S V V  A++  Y K G++E +  +F 
Sbjct: 198 GVSWSAMISGYVEHGDLEAAEELYK---NVGMKS-VVVETAMLTGYMKFGKVELAERIFQ 253

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
               +N VTWN+MI GYV+       + +F  M+E +V    ++ SSVL  C++L+AL  
Sbjct: 254 RMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPL 313

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G Q+H L  K+    D     +LI MY KCG +  A  +F  M   + ++WNAMISGY+ 
Sbjct: 314 GRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQ 373

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
           HG   + L +FD M+    +P+ +TFV V+ AC++ G ++ G  YFKSM   +GIE    
Sbjct: 374 HGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPV 433

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDF 642
           HYT ++ LLGRAG LD+A  LI+ +PF P   I+  LLGAC IH N+++   +A+++L+ 
Sbjct: 434 HYTCVIDLLGRAGRLDEAVSLIKEMPFTPHAAIYGTLLGACRIHKNLDLAEFAARNLLNL 493

Query: 643 EPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTS 691
           +P     +V L+NIYA    W++ A            K PG SWIE + + H FR+ D  
Sbjct: 494 DPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRL 553

Query: 692 HADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMP 751
           H ++  I   L  L+ K + AGY+PDL   L DV E+ KE+ L  HSEKLA+AF L K  
Sbjct: 554 HPELTSIHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTA 613

Query: 752 PSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           P +PIR+ KNLR+C DCH AIK IS I +REII+RD  RFHHF++G CSCGD+W
Sbjct: 614 PGTPIRVFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 111/412 (26%), Positives = 195/412 (47%), Gaps = 35/412 (8%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYT-VSSQFVEAVGLFSTL 148
           D+ + N  +  +V+   L  A  +F++M  R T+++ T + GYT V+ +  EA  LF  +
Sbjct: 72  DVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKI 131

Query: 149 HREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCV 208
                         +L+   S G         A   K+     A   T LI  F+  G +
Sbjct: 132 PEPDSVSYNIMLVCYLR---SYG----VKAALAFFNKMPVKDIASWNT-LISGFAQNGQM 183

Query: 209 EFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCA 268
           +   K FD LF+   E+    +S M +   +  +   A  L   +G+ ++          
Sbjct: 184 Q---KAFD-LFSVMPEKNGVSWSAMISGYVEHGDLEAAEELYKNVGMKSV---------- 229

Query: 269 LKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAV 328
                     V  A+L  Y K G++  A RIF+ M  K+++ W+ MIA Y +   + D +
Sbjct: 230 ---------VVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGL 280

Query: 329 ELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVY 388
           ++F  M ++ V PN  +  SVL  C+ +  L LG Q+H LV +  L  D     +L+ +Y
Sbjct: 281 KVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMY 340

Query: 389 AKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYS 448
            KCG ++++ +LF E P+++ +TWN MI GY Q G   KA+ +F KM    +    +T+ 
Sbjct: 341 CKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFV 400

Query: 449 SVLRACASLAALEPGMQVHCLTVKANYDMDV--VVANALIDMYAKCGSITDA 498
           +V+ AC     ++ G+Q +  ++K  + ++   V    +ID+  + G + +A
Sbjct: 401 AVILACNHAGFVDLGVQ-YFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEA 451



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 160/346 (46%), Gaps = 25/346 (7%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D  + N++L  Y++   +  A   F++MP ++  S+ T I G+  + Q  +A  LFS + 
Sbjct: 135 DSVSYNIMLVCYLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMP 194

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
               E N  +++A +   V  G  E    ++  V   G  S   V TA++  +   G VE
Sbjct: 195 ----EKNGVSWSAMISGYVEHGDLEAAEELYKNV---GMKS-VVVETAMLTGYMKFGKVE 246

Query: 210 FARKVFD---------------GLFNDC-FEEALNFFSQMRAVGFKPNNFTFAFVLKACL 253
            A ++F                G   +C  E+ L  F  M     +PN  + + VL  C 
Sbjct: 247 LAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCS 306

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSF 313
            L  + + +  H    K+    D     +L+ +Y K G++ +A ++F EMP+KDVI W+ 
Sbjct: 307 NLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNA 366

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ-IHSLVVRV 372
           MI+ YAQ      A+ LF +MR   + P+  TFV+V+ AC     +DLG Q   S+    
Sbjct: 367 MISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEF 426

Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           G+ +       ++D+  + GR++ +V L  E P   H      ++G
Sbjct: 427 GIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFTPHAAIYGTLLG 472



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 162/357 (45%), Gaps = 56/357 (15%)

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSI-DAVELFCRMRQAFVAPNQFT 345
           + ++ ++ +AR +FE+M  +  + W+ M++ Y +    + +A ELF ++ +    P+  +
Sbjct: 83  FVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKIPE----PDSVS 138

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           +                                   N ++  Y +   ++ ++  F + P
Sbjct: 139 Y-----------------------------------NIMLVCYLRSYGVKAALAFFNKMP 163

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
            ++  +WNT+I G+ Q G++ KA  +FS M E+      V++S+++        LE   +
Sbjct: 164 VKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKN----GVSWSAMISGYVEHGDLEAAEE 219

Query: 466 VHCLTVKANYDM-DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
           ++      N  M  VVV  A++  Y K G +  A  +F  M   N V+WN+MI+GY  + 
Sbjct: 220 LY-----KNVGMKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENC 274

Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY 584
            + + LKVF  M +   RPN L+   VL  CSN   L  G      +V+   +       
Sbjct: 275 RAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQ-MHQLVSKSPLSKDTTAC 333

Query: 585 TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
           TS++S+  + G LD A KL   +P +  V+ W A++     H     GR  A H+ D
Sbjct: 334 TSLISMYCKCGDLDSAWKLFLEMP-RKDVITWNAMISGYAQHG---AGR-KALHLFD 385



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 79/156 (50%), Gaps = 9/156 (5%)

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL-GEVGKA 428
           + V   SDV   N  +  + +   +E++  +F +   R  VTWNTM+ GY ++ G+V +A
Sbjct: 65  LHVDTASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEA 124

Query: 429 MIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDM 488
             +F K+ E    +  +     LR+    AAL      + + VK     D+   N LI  
Sbjct: 125 HELFDKIPEPDSVSYNIMLVCYLRSYGVKAALA---FFNKMPVK-----DIASWNTLISG 176

Query: 489 YAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
           +A+ G +  A  +F +M + N VSW+AMISGY  HG
Sbjct: 177 FAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYVEHG 212



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 11/154 (7%)

Query: 478 DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS-MHGLSAEVLKVFDLM 536
           DVV  N  I  + +   +  AR VF+ M+    V+WN M+SGY+ + G   E  ++FD +
Sbjct: 72  DVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKI 131

Query: 537 QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGH 596
            +    P+++++  +L        ++   A+F  M         I  + +++S   + G 
Sbjct: 132 PE----PDSVSYNIMLVCYLRSYGVKAALAFFNKMPVK-----DIASWNTLISGFAQNGQ 182

Query: 597 LDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
           + KA  L   +P +  V  W A++   + H ++E
Sbjct: 183 MQKAFDLFSVMPEKNGVS-WSAMISGYVEHGDLE 215



 Score = 43.9 bits (102), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 77/199 (38%), Gaps = 19/199 (9%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  S ++ L  C     L     +H  V K     D  A   L+++Y K   L  A KLF
Sbjct: 294 NPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLF 353

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
            EMP ++ I++   I GY       +A+ LF  +     + +   F A +      G+ +
Sbjct: 354 LEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVD 413

Query: 175 LCPCVFACVYK-LGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQM 233
           L    F  + K  G ++     T +ID     G +               +EA++   +M
Sbjct: 414 LGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRL---------------DEAVSLIKEM 458

Query: 234 RAVGFKPNNFTFAFVLKAC 252
               F P+   +  +L AC
Sbjct: 459 ---PFTPHAAIYGTLLGAC 474


>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Glycine max]
          Length = 782

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 249/821 (30%), Positives = 391/821 (47%), Gaps = 143/821 (17%)

Query: 75  AMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTV 134
           A  +H  +L  G        N L++ Y K   +P A  LFD++P+ + ++  T +  Y+ 
Sbjct: 15  ARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSAYSA 74

Query: 135 SSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFV 194
           +     A  LF+          P +                             D+ ++ 
Sbjct: 75  AGNIKLAHQLFNA--------TPMSI---------------------------RDTVSY- 98

Query: 195 GTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKA-CL 253
             A+I AFS            DG        AL  F QM+ +GF P+ FTF+ VL A  L
Sbjct: 99  -NAMITAFS---------HSHDG------HAALQLFVQMKRLGFVPDPFTFSSVLGALSL 142

Query: 254 GLDTIRVAKSAHGC---------------ALKTCY------------------------- 273
             D     +  H C               AL +CY                         
Sbjct: 143 IADEETHCQQLH-CEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAAARKLFDEA 201

Query: 274 ---EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVEL 330
                D      ++  Y ++ ++  AR + E M     + W+ MI+ Y       +A +L
Sbjct: 202 PPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDL 261

Query: 331 FCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD----VFVSNALMD 386
             RM    +  +++T+ SV+ A +     ++G Q+H+ V+R  +       + V+NAL+ 
Sbjct: 262 LRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNALIT 321

Query: 387 VYAKCG-------------------------------RMENSVELFAESPKRNHVTWNTM 415
           +Y +CG                               R+E +  +F E P R+ +TW  M
Sbjct: 322 LYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVM 381

Query: 416 IVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY 475
           I G  Q G   + + +F++M  E +   +  Y+  + +C+ L +L+ G Q+H   ++  +
Sbjct: 382 ISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGH 441

Query: 476 DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDL 535
           D  + V NALI MY++CG +  A  VF  M   + VSWNAMI+  + HG   + +++++ 
Sbjct: 442 DSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEK 501

Query: 536 MQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAG 595
           M +    P+ +TF+ +LSACS+ GL+++G  YF +M   YGI P  +HY+ ++ LL RAG
Sbjct: 502 MLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSRLIDLLCRAG 561

Query: 596 HLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSN 655
              +A  + E +PF+P   IW ALL  C IH N+E+G  +A  +L+  P+ + T++ LSN
Sbjct: 562 MFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQQDGTYISLSN 621

Query: 656 IYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEW 704
           +YA    W           E+   KEPG SWIE + MVH F   D  H +++ +   LE 
Sbjct: 622 MYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVDDAVHPEVHAVYRYLEQ 681

Query: 705 LNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRI 764
           L  + RK GY+PD   VL D+  ++KE  L  HSEKLA+ + + K+P  + IR+ KNLRI
Sbjct: 682 LVHEMRKLGYVPDTKFVLHDMESEQKEYALSTHSEKLAVVYGIMKLPLGATIRVFKNLRI 741

Query: 765 CVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           C DCH A K ISK+V REII+RD  RFHHF++G CSC ++W
Sbjct: 742 CGDCHNAFKYISKVVDREIIVRDRKRFHHFRNGECSCSNYW 782



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 127/555 (22%), Positives = 218/555 (39%), Gaps = 109/555 (19%)

Query: 3   RLFNYKTFSCKQ-LTHQSKINAWLRGLSAQAALST-QQCSNSTTTPITFSVSEFNSHSYA 60
           +LFN    S +  +++ + I A+       AAL    Q       P  F+   F+S   A
Sbjct: 83  QLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFT---FSSVLGA 139

Query: 61  TSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLP---------DAT 111
            SL +    D+      +HC+V K G        N L++ YV     P          A 
Sbjct: 140 LSLIA----DEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAAAR 195

Query: 112 KLFDEMP--ERNTISFVTTIQGYTVSSQFV------------------------------ 139
           KLFDE P   R+  ++ T I GY  +   V                              
Sbjct: 196 KLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFY 255

Query: 140 -EAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYK-LGHDSNAF---V 194
            EA  L   +H  G +L+ + +T+ +    + G   +   V A V + +   S  F   V
Sbjct: 256 EEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSV 315

Query: 195 GTALIDAFSVCGCVEFARKVFD-------------------------------------- 216
             ALI  ++ CG +  AR+VFD                                      
Sbjct: 316 NNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSL 375

Query: 217 --------GLFNDCF-EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGC 267
                   GL  + F EE L  F+QM+  G +P ++ +A  + +C  L ++   +  H  
Sbjct: 376 LTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQ 435

Query: 268 ALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDA 327
            ++  ++  L V  AL+ +Y++ G +  A  +F  MP  D + W+ MIA  AQ    + A
Sbjct: 436 IIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQA 495

Query: 328 VELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ-IHSLVVRVGLLSDVFVSNALMD 386
           ++L+ +M +  + P++ TF+++L AC+    +  G     ++ V  G+  +    + L+D
Sbjct: 496 IQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSRLID 555

Query: 387 VYAKCGRMENSVELFAESP-KRNHVTWNTMIVGYVQLG--EVGKAMIMFSKMLEEQVPAT 443
           +  + G    +  +    P +     W  ++ G    G  E+G   I  +  L E +P  
Sbjct: 556 LLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELG---IQAADRLLELMPQQ 612

Query: 444 EVTYSSVLRACASLA 458
           + TY S+    A+L 
Sbjct: 613 DGTYISLSNMYAALG 627



 Score = 41.2 bits (95), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 53/257 (20%), Positives = 100/257 (38%), Gaps = 28/257 (10%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
           ++YA ++ SC     L     +H Q+++ G+   L   N L+ +Y +   +  A  +F  
Sbjct: 411 YAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLT 470

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
           MP  +++S+   I         V+A+ L+  + +E  ++ P   T FL +L +       
Sbjct: 471 MPYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKE--DILPDRIT-FLTILSA------- 520

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN-----DCFEEALNFFS 231
            C  A + K G            D   VC  +      +  L +       F EA N   
Sbjct: 521 -CSHAGLVKEGRH--------YFDTMRVCYGITPEEDHYSRLIDLLCRAGMFSEAKNVTE 571

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
            M    F+P    +  +L  C     + +   A    L+   + D    ++L ++Y   G
Sbjct: 572 SM---PFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQQD-GTYISLSNMYAALG 627

Query: 292 EISNARRIFEEMPKKDV 308
           +     R+ + M ++ V
Sbjct: 628 QWDEVARVRKLMRERGV 644


>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 998

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 232/691 (33%), Positives = 377/691 (54%), Gaps = 30/691 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N +  A+ +++C Q   L  A+ IH  V+K G   D++    L++ Y K   + DA  LF
Sbjct: 140 NEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLF 199

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHEL-NPFAFTAFLKVLVSMGWA 173
           D +  + + ++ T I GY+   +   ++ LF  + +EGH   + +  ++ L   + + + 
Sbjct: 200 DGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQM-KEGHVCPDKYVLSSVLSACLMLKFL 258

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF-------------- 219
           E    +   V + G   +  +    ID +  C  V+  RK+FD +               
Sbjct: 259 EGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGC 318

Query: 220 --NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
             N    +AL+ F +M  +G+ P+ F    VL +C  L  +   +  H  A+K   + D 
Sbjct: 319 MQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDD 378

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
           +V   L+D+Y K   +++AR++F  M   D++ ++ MI  Y++ D   +A++LF  MR +
Sbjct: 379 FVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLS 438

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
             +P    FVS+L   A++  L+L NQIH L+++ G+  D F  +AL+DVY+KC R+ ++
Sbjct: 439 LSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDA 498

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
             +F E   ++ V W  M  GY Q  E  +++ ++  +   ++   E T+++V+ A +++
Sbjct: 499 RLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNI 558

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
           A+L  G Q H   +K  +D D  VAN L+DMYAK GSI +A   F   N  +   WN+MI
Sbjct: 559 ASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMI 618

Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
           + Y+ HG + + L+VF+ M   G +PN +TFVGVLSACS+ GLL+ G  +F SM + +GI
Sbjct: 619 ATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSM-SQFGI 677

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQ 637
           EP IEHY  MVSLLGRAG L +A + IE +P + + ++WR+LL AC +  NVE+G  +A+
Sbjct: 678 EPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSACRVSGNVELGTYAAE 737

Query: 638 HILDFEPEDEATHVLLSNIYAMARSW-------EK----AASKEPGLSWIENQGMVHYFR 686
             +   P D  ++VLLSNI+A    W       EK       KEPG SWIE    +H F 
Sbjct: 738 MAISCNPADSGSYVLLSNIFASKGMWVNVRRLREKMDISGVVKEPGCSWIEVNNEIHKFI 797

Query: 687 AGDTSHADMNIIRGMLEWLNMKSRKAGYIPD 717
           A DT+H D   I  +L+ L ++ +  GY+ +
Sbjct: 798 AKDTAHRDSAPISLVLDNLLLQIKGFGYMAN 828



 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 168/587 (28%), Positives = 297/587 (50%), Gaps = 22/587 (3%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKG-NCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERN 121
           L + +Q+  +     IH +++  G +  D+F  N LL+ Y KLN +  A KLFD M  +N
Sbjct: 45  LANLLQSPHIPCCKKIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKN 104

Query: 122 TISFVTTIQGYTVSSQFVEAVGLFSTLHREGHEL-NPFAFTAFLKVLVSMGWAELCPCVF 180
            +++ + +  YT  S  +EA+ LF    R  +E  N +   + ++     G       + 
Sbjct: 105 LVTWSSMVSMYTHHSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIH 164

Query: 181 ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-FNDCF---------------E 224
             V K G+  + +V T+LID ++   C++ AR +FDGL     F               +
Sbjct: 165 GLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQ 224

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
            +L  F QM+     P+ +  + VL ACL L  +   K  H   L++   MD+ +    +
Sbjct: 225 VSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFI 284

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
           D Y K  ++   R++F+ M  K+V+ W+ +IA   Q     DA++LF  M +    P+ F
Sbjct: 285 DFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAF 344

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
              SVL +C ++  L+ G Q+H+  ++V + +D FV N L+D+YAKC  + ++ ++F   
Sbjct: 345 GCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLM 404

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
              + V++N MI GY +  ++ +A+ +F +M       T + + S+L   ASL  LE   
Sbjct: 405 AAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSN 464

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
           Q+H L +K    +D    +ALID+Y+KC  + DARLVF+ + D + V W AM SGY+   
Sbjct: 465 QIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQS 524

Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA-NYGIEPCIEH 583
            + E LK++  +Q    +PN  TF  V++A SN   L  G+ +   ++   +  +P + +
Sbjct: 525 ENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVAN 584

Query: 584 YTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
             ++V +  ++G +++A K      ++ +   W +++     H   E
Sbjct: 585 --TLVDMYAKSGSIEEAHKAFISTNWKDTA-CWNSMIATYAQHGEAE 628


>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
 gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
          Length = 652

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 220/655 (33%), Positives = 356/655 (54%), Gaps = 55/655 (8%)

Query: 202 FSVCGCVEFARKVFDGLFN-DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRV 260
           F   GCVE AR++FD + + D F   +      R+         F  + +  LG  T  +
Sbjct: 2   FGRLGCVERARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLGSWTALL 61

Query: 261 ---AKSAHGCALKTCY----EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSF 313
              A S H    KT +    E DL     +L +      I +A+  F++MP++D++ W+ 
Sbjct: 62  SAFALSGHHEEAKTLFDTMQERDLIAWTIMLTVLATFSNIEDAKYHFDQMPERDLVAWTA 121

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIH------S 367
           M+A  A+     +A E F +M +     N F++ S+L A      +    ++       +
Sbjct: 122 MLAANAERGQMENARETFDQMPER----NLFSWTSLLSAYGRSGDVKAAGRVFDSMPEWN 177

Query: 368 LVVRVGLLS---------------------DVFVSNALMDVYAKCGRMENSVELFAESPK 406
           LV    +L+                     D+    A++  YA  G +  + E+F   P+
Sbjct: 178 LVAWTAMLTGYSLSGDVVRAKRAFDSMPERDLIAWTAMLSAYAFNGHLRYTREIFQRMPE 237

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKM-----LEEQVPATEVTYSSVLRACASLAALE 461
           R+ ++W TM+   V+   + ++  +F +M     L + +    VT+ ++L AC+ L AL 
Sbjct: 238 RDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACSFLGALA 297

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
            G ++H    +  +D D+VV+NAL++ Y +CG++ DA++VFD M   + +SW++MIS ++
Sbjct: 298 EGRKIHAAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFA 357

Query: 522 MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
             G   E ++++  M   G  P+++ F+ VL ACSN G++E    +F+S+V +  +EP +
Sbjct: 358 QRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTL 417

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
           EHY  MV +LGRAG L  A  L+  +PF P  +++  +L AC ++ +VE G  +A+ + +
Sbjct: 418 EHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAAAEVVFE 477

Query: 642 FEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDT 690
            +PE+ + ++ L+NIY+ A+  + AA            K+PG SWIE    VH F AGD 
Sbjct: 478 LDPENSSPYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHEFIAGDK 537

Query: 691 SHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKM 750
            H   + I   ++ L  + ++AGY  D   VL+DV EDEKE  LW HSEKLA+AF L   
Sbjct: 538 MHPQRDEIYAEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIAFGLIST 597

Query: 751 PPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           PP +P+RI+KNLR+C DCH A K+ISK+  REI++RD +RFHHFQ+G CSC D+W
Sbjct: 598 PPGAPLRIVKNLRVCSDCHAATKVISKVTGREILVRDTNRFHHFQNGMCSCNDYW 652



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 125/496 (25%), Positives = 221/496 (44%), Gaps = 66/496 (13%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D F+  ++L++Y +   L +A  +FD MP  +  S+   +  + +S    EA  LF T+ 
Sbjct: 22  DSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLGSWTALLSAFALSGHHEEAKTLFDTMQ 81

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
               E +  A+T  L VL +    E     F  +     + +    TA++ A +  G +E
Sbjct: 82  ----ERDLIAWTIMLTVLATFSNIEDAKYHFDQM----PERDLVAWTAMLAANAERGQME 133

Query: 210 FARKVFDGLFNDCFEEALNFFSQM-RAVGFKPNNFTF------------AFVLKACLGLD 256
            AR+ FD +         +  S   R+   K     F            A +    L  D
Sbjct: 134 NARETFDQMPERNLFSWTSLLSAYGRSGDVKAAGRVFDSMPEWNLVAWTAMLTGYSLSGD 193

Query: 257 TIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIA 316
            +R  +     A  +  E DL    A+L  Y  +G +   R IF+ MP++D+I W+ M+A
Sbjct: 194 VVRAKR-----AFDSMPERDLIAWTAMLSAYAFNGHLRYTREIFQRMPERDLISWATMVA 248

Query: 317 RYAQTDLSIDAVELFCRMRQ-----AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR 371
              + DL  ++ ELF RM +       + PN+ TF+++L AC+ +  L  G +IH+ V  
Sbjct: 249 ALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACSFLGALAEGRKIHAAVAE 308

Query: 372 VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIM 431
            G  +D+ VSNAL++ Y +CG + ++  +F    +R+ ++W++MI  + Q G V +AM +
Sbjct: 309 RGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMEL 368

Query: 432 FSKMLEEQVPATEVTYSSVLRACASLAALE-PGMQVHCLTVKANYDMDVVVANALIDMYA 490
           + +ML E     ++ + SVL AC++   +E  G     +      +  +     ++D+  
Sbjct: 369 YHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVLG 428

Query: 491 KCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVG 550
           + G + DA                                   DL++   + P  L ++ 
Sbjct: 429 RAGKLRDAE----------------------------------DLLRLMPFHPGPLLYMT 454

Query: 551 VLSACSNGGLLEQGEA 566
           +LSAC     +E+GEA
Sbjct: 455 MLSACKLYTDVERGEA 470



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 92/382 (24%), Positives = 173/382 (45%), Gaps = 56/382 (14%)

Query: 286 LYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQT-DLSIDAVELFCRMRQAFVAPNQF 344
           ++ + G +  AR+IF+ +  +D   W  M++ YA++ DLS +A  +F RM +  +     
Sbjct: 1   MFGRLGCVERARQIFDAIADRDSFSWGIMLSIYARSGDLS-NAKGVFDRMPRWSLG---- 55

Query: 345 TFVSVLQACA-------------TMEGLDLGNQIHSLVVRVGLLS--------------D 377
           ++ ++L A A             TM+  DL      L V     +              D
Sbjct: 56  SWTALLSAFALSGHHEEAKTLFDTMQERDLIAWTIMLTVLATFSNIEDAKYHFDQMPERD 115

Query: 378 VFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
           +    A++   A+ G+MEN+ E F + P+RN  +W +++  Y + G+V  A  +F  M E
Sbjct: 116 LVAWTAMLAANAERGQMENARETFDQMPERNLFSWTSLLSAYGRSGDVKAAGRVFDSMPE 175

Query: 438 EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD----MDVVVANALIDMYAKCG 493
             +    V ++++L   +        +    +  K  +D     D++   A++  YA  G
Sbjct: 176 WNL----VAWTAMLTGYS--------LSGDVVRAKRAFDSMPERDLIAWTAMLSAYAFNG 223

Query: 494 SITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ-----RGWRPNNLTF 548
            +   R +F  M + + +SW  M++    + L  E  ++FD M +     +G  PN +TF
Sbjct: 224 HLRYTREIFQRMPERDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTF 283

Query: 549 VGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIP 608
           + +L ACS  G L +G     + VA  G +  +    ++V+  GR G L  A  + +G+ 
Sbjct: 284 ITLLDACSFLGALAEGRK-IHAAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMR 342

Query: 609 FQPSVMIWRALLGACIIHNNVE 630
            +  V+ W +++ A      V+
Sbjct: 343 -RRDVISWSSMISAFAQRGRVD 363



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 16/159 (10%)

Query: 488 MYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLT 547
           M+ + G +  AR +FD + D +  SW  M+S Y+  G  +    VFD M +  W   + T
Sbjct: 1   MFGRLGCVERARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMPR--WSLGSWT 58

Query: 548 FVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGI 607
              +LSA +  G  E+ +  F +M      E  +  +T M+++L    +++ A    + +
Sbjct: 59  --ALLSAFALSGHHEEAKTLFDTMQ-----ERDLIAWTIMLTVLATFSNIEDAKYHFDQM 111

Query: 608 PFQPSVMIWRALLGACIIHNNVEIGRL-SAQHILDFEPE 645
           P +  ++ W A+L A     N E G++ +A+   D  PE
Sbjct: 112 P-ERDLVAWTAMLAA-----NAERGQMENARETFDQMPE 144


>gi|302763721|ref|XP_002965282.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
 gi|300167515|gb|EFJ34120.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
          Length = 721

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 226/661 (34%), Positives = 364/661 (55%), Gaps = 44/661 (6%)

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF----------------EEA 226
           + + G  S+A++   L+   +  G +  AR +FD + +                     A
Sbjct: 67  ITRAGLGSSAYLNNLLVLMLAKHGSLCEARSIFDAIQHKNIFSWNIIISAYAHRGHPSTA 126

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHG-CALKTCYEMDLYVAVALLD 285
           L+ F++M      P   TFA  L AC  L  ++  +  H            + +  A+  
Sbjct: 127 LHLFAKM---DVPPTAMTFATALSACSSLGDLQRGREIHARIKASRGIRPSVILDTAIFS 183

Query: 286 LYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSI-DAVELFCRMRQAFVAPNQF 344
           +Y K G++S A+ +F+ +P K+V+ W+ +IA YAQ+  S   A++LF +M +  V P + 
Sbjct: 184 MYAKCGDLSTAKSVFDRIPAKNVVSWNALIAAYAQSGHSHHQALDLFEKMAEHGVRPCRA 243

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGL---LSDVFVSNALMDVYAKCGRMENSVELF 401
           TFV VL AC  +  L+   +IH+ +V  GL   + DV V NAL+++YAKCG +E + ++F
Sbjct: 244 TFVGVLGACNDVTSLE---KIHARIVETGLQFDVRDVGVQNALLNMYAKCGSLEVARDIF 300

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
            +  +R+ V+ N MI  + Q G   +++ +F +M  E +P  + T++SV+ AC+   ALE
Sbjct: 301 RKMQRRDQVSMNVMIATFAQQGLGKESIQVFREMDLEGLPQDDTTFASVITACSCCGALE 360

Query: 462 PGMQVHCLTVKANYDM-----DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
            G ++H   V+          +VVV  AL+ MY KCG++  A+ VF  M   N VSWNAM
Sbjct: 361 FGKRIHKRVVEPVLGRKCCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTKNSVSWNAM 420

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           ++  +  G   E           G   ++ +F+ VL ACS+ G+LE    +F+ M++++ 
Sbjct: 421 LAACAHQGQGDEAAAFLRAAACEGVELDSASFISVLIACSHSGMLEVAYDHFQLMLSDFD 480

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
           + P  E+Y  MV LL R+G L  A +L+  +PF P  + WR LLG C +  ++E    +A
Sbjct: 481 LVPAAENYRCMVDLLARSGRLGDADELMNSMPFSPDAIAWRTLLGGCRVQGSLENAASAA 540

Query: 637 QHILDFEPEDEATHVLLSNIYAMARSWE-----KAASKE-------PGLSWIENQGMVHY 684
           +   + EP++ A + LLS++Y+     +     +++ KE       PG S IE  G VH 
Sbjct: 541 EQAFNLEPQNTAPYTLLSSLYSATGKKDELVELRSSMKERGLRKLVPGRSVIEVHGRVHE 600

Query: 685 FRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALA 744
           F AGD+SH  ++ I   L+ LN++ ++AG++P    V+ D++ ++KE  L +HSEKLA+A
Sbjct: 601 FVAGDSSHPQIDKILRELDILNVELKQAGFVPSTDGVVHDLKTEDKEEILALHSEKLAVA 660

Query: 745 FALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
           F L       P+ ++KNLR+C DCH AIK+ISK+  R I +RD +RFH FQ G CSCGD+
Sbjct: 661 FGLISTKSGIPLLVLKNLRVCSDCHGAIKLISKLRSRVITVRDANRFHRFQSGTCSCGDY 720

Query: 805 W 805
           W
Sbjct: 721 W 721



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 130/510 (25%), Positives = 228/510 (44%), Gaps = 43/510 (8%)

Query: 46  PITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLN 105
           P+     E  S S+A +++SC    D  +   IH ++ + G     +  N+L+ +  K  
Sbjct: 34  PLDSLEREIQSDSFAAAIRSC---KDSNSVSIIHQKITRAGLGSSAYLNNLLVLMLAKHG 90

Query: 106 RLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFA--FTAF 163
            L +A  +FD +  +N  S+   I  Y        A+ LF+ +     ++ P A  F   
Sbjct: 91  SLCEARSIFDAIQHKNIFSWNIIISAYAHRGHPSTALHLFAKM-----DVPPTAMTFATA 145

Query: 164 LKVLVSMGWAELCPCVFACVY-KLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---- 218
           L    S+G  +    + A +    G   +  + TA+   ++ CG +  A+ VFD +    
Sbjct: 146 LSACSSLGDLQRGREIHARIKASRGIRPSVILDTAIFSMYAKCGDLSTAKSVFDRIPAKN 205

Query: 219 -------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAH 265
                              +AL+ F +M   G +P   TF  VL AC  + ++   +  H
Sbjct: 206 VVSWNALIAAYAQSGHSHHQALDLFEKMAEHGVRPCRATFVGVLGACNDVTSL---EKIH 262

Query: 266 GCALKTCYEMDLY---VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTD 322
              ++T  + D+    V  ALL++Y K G +  AR IF +M ++D +  + MIA +AQ  
Sbjct: 263 ARIVETGLQFDVRDVGVQNALLNMYAKCGSLEVARDIFRKMQRRDQVSMNVMIATFAQQG 322

Query: 323 LSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV-----RVGLLSD 377
           L  +++++F  M    +  +  TF SV+ AC+    L+ G +IH  VV     R   L +
Sbjct: 323 LGKESIQVFREMDLEGLPQDDTTFASVITACSCCGALEFGKRIHKRVVEPVLGRKCCLPN 382

Query: 378 VFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
           V V  AL+ +Y KCG +E +  +F     +N V+WN M+      G+  +A         
Sbjct: 383 VVVETALVSMYGKCGTLEQAKAVFKAMTTKNSVSWNAMLAACAHQGQGDEAAAFLRAAAC 442

Query: 438 EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSI 495
           E V     ++ SVL AC+    LE     H   + +++D+     N   ++D+ A+ G +
Sbjct: 443 EGVELDSASFISVLIACSHSGMLEVAYD-HFQLMLSDFDLVPAAENYRCMVDLLARSGRL 501

Query: 496 TDA-RLVFDMMNDWNEVSWNAMISGYSMHG 524
            DA  L+  M    + ++W  ++ G  + G
Sbjct: 502 GDADELMNSMPFSPDAIAWRTLLGGCRVQG 531



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 76/222 (34%), Positives = 126/222 (56%), Gaps = 10/222 (4%)

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           +F + +++C     + +   IH  + R GL S  +++N L+ + AK G +  +  +F   
Sbjct: 46  SFAAAIRSCKDSNSVSI---IHQKITRAGLGSSAYLNNLLVLMLAKHGSLCEARSIFDAI 102

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
             +N  +WN +I  Y   G    A+ +F+KM    VP T +T+++ L AC+SL  L+ G 
Sbjct: 103 QHKNIFSWNIIISAYAHRGHPSTALHLFAKM---DVPPTAMTFATALSACSSLGDLQRGR 159

Query: 465 QVHCLTVKANYDM--DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           ++H   +KA+  +   V++  A+  MYAKCG ++ A+ VFD +   N VSWNA+I+ Y+ 
Sbjct: 160 EIHA-RIKASRGIRPSVILDTAIFSMYAKCGDLSTAKSVFDRIPAKNVVSWNALIAAYAQ 218

Query: 523 HGLS-AEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQ 563
            G S  + L +F+ M + G RP   TFVGVL AC++   LE+
Sbjct: 219 SGHSHHQALDLFEKMAEHGVRPCRATFVGVLGACNDVTSLEK 260



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 95/187 (50%), Gaps = 9/187 (4%)

Query: 436 LEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSI 495
           LE ++ +   ++++ +R+C    ++     +H    +A       + N L+ M AK GS+
Sbjct: 38  LEREIQSD--SFAAAIRSCKDSNSVSI---IHQKITRAGLGSSAYLNNLLVLMLAKHGSL 92

Query: 496 TDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSAC 555
            +AR +FD +   N  SWN +IS Y+  G  +  L +F  M      P  +TF   LSAC
Sbjct: 93  CEARSIFDAIQHKNIFSWNIIISAYAHRGHPSTALHLFAKMD---VPPTAMTFATALSAC 149

Query: 556 SNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMI 615
           S+ G L++G      + A+ GI P +   T++ S+  + G L  A  + + IP + +V+ 
Sbjct: 150 SSLGDLQRGREIHARIKASRGIRPSVILDTAIFSMYAKCGDLSTAKSVFDRIPAK-NVVS 208

Query: 616 WRALLGA 622
           W AL+ A
Sbjct: 209 WNALIAA 215


>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1112

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 246/748 (32%), Positives = 406/748 (54%), Gaps = 45/748 (6%)

Query: 51  VSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDA 110
           +   +S ++++ L+SCI+    +    +H ++++     D    N L+++Y K   L  A
Sbjct: 57  IRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSGDLTKA 116

Query: 111 TKLFDEMP---ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVL 167
             +F+ M    +R+ +S+   +  +  + +  +A+ LF      G   N + +TA ++  
Sbjct: 117 KDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRAC 176

Query: 168 VSMGWAELCPCVFACVYKLGH-DSNAFVGTALIDAFSVCG--CVEFARKVFDGL------ 218
            +  +  +   +   + K GH +S+  VG +LID F V G    E A KVFD +      
Sbjct: 177 SNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMF-VKGENSFENAYKVFDKMSELNVV 235

Query: 219 -----FNDCFE-----EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCA 268
                   C +     EA+ FF  M   GF+ + FT + V  AC  L+ + + +  H  A
Sbjct: 236 TWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQLHSWA 295

Query: 269 LKTCYEMDLYVAVALLDLYTK---SGEISNARRIFEEMPKKDVIPWSFMIARYAQT-DLS 324
           +++    D  V  +L+D+Y K    G + + R++F+ M    V+ W+ +I  Y Q  +L+
Sbjct: 296 IRSGLADD--VECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQNCNLA 353

Query: 325 IDAVELFCRM-RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNA 383
            +A+ LF  M  Q  V PN FTF S  +AC  +    +G Q+     + GL S+  VSN+
Sbjct: 354 TEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNSSVSNS 413

Query: 384 LMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPAT 443
           ++ ++ KC RME++   F    ++N V++NT + G  +  +   A  + S++ E ++  +
Sbjct: 414 VISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVS 473

Query: 444 EVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFD 503
             T++S+L   A++ +L  G Q+H   +K     +  V NALI MY+KCGSI  A  VF 
Sbjct: 474 AFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTASRVFS 533

Query: 504 MMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQ 563
           +M++ N +SW +MI+G++ HG +  VL+ F+ M + G +PN +T+V +LSACS+ GL+ +
Sbjct: 534 LMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAILSACSHVGLVSE 593

Query: 564 GEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGAC 623
           G  +F SM  ++ I+P +EHY  MV LL RAG L  A + I  +PFQ  V++WR  LGAC
Sbjct: 594 GWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGAC 653

Query: 624 IIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPG 672
            +H+N E+G+L+A+ IL+F+P + A ++ LSNIYA A  WE++             KE G
Sbjct: 654 RVHSNTELGKLAARKILEFDPNEPAAYIQLSNIYASAGKWEESTEMRRKMKERNLVKEGG 713

Query: 673 LSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKER 732
            SWIE    VH F  GDTSH + + I   L+WL  + ++ GY+PD   VL  + E++ E 
Sbjct: 714 CSWIEVGDKVHKFYVGDTSHPNAHQIYDELDWLITEIKRCGYVPDTDLVLHKLEEEDDEA 773

Query: 733 ----YLWVHSEKLALAFALFKMPPSSPI 756
                L+ HSEK+A+AF L     S P+
Sbjct: 774 KKEMLLYQHSEKIAVAFGLISTAKSRPM 801



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 127/289 (43%), Gaps = 30/289 (10%)

Query: 47  ITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNR 106
           IT    E N  +++++ ++C    D +    +     K+G   +   +N +++++VK +R
Sbjct: 364 ITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCDR 423

Query: 107 LPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV 166
           + DA   F+ + E+N +S+ T + G   +  F  A  L S +      ++ F F + L  
Sbjct: 424 MEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVSAFTFASLLSG 483

Query: 167 LVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------- 216
           + ++G       + + V KLG   N  V  ALI  +S CG ++ A +VF           
Sbjct: 484 VANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTASRVFSLMDNRNVISW 543

Query: 217 -----GLFNDCF-EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALK 270
                G     F E  L  F+QM   G KPN  T+  +L AC  +  +    S       
Sbjct: 544 TSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAILSACSHVGLV----SEGWRHFN 599

Query: 271 TCYE-------MDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPW 311
           + YE       M+ Y    ++DL  ++G +++A      MP + DV+ W
Sbjct: 600 SMYEDHKIKPKMEHY--ACMVDLLCRAGLLTDAFEFINTMPFQADVLVW 646


>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Glycine max]
          Length = 628

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 223/568 (39%), Positives = 317/568 (55%), Gaps = 53/568 (9%)

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y   G + ++  +F   P  +V  W+ +I  +A  DL   A+  + +M    + PN FT 
Sbjct: 65  YASLGHLHHSVTLFHRTPNPNVFLWTHIINAHAHFDLFHHALSYYSQMLTHPIQPNAFTL 124

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
            S+L+AC     L     +HS  ++ GL S ++VS  L+D YA+ G + ++ +LF   P+
Sbjct: 125 SSLLKACT----LHPARAVHSHAIKFGLSSHLYVSTGLVDAYARGGDVASAQKLFDAMPE 180

Query: 407 RNHVT-------------------------------WNTMIVGYVQLGEVGKAMIMFSKM 435
           R+ V+                               WN MI GY Q G   +A++ F KM
Sbjct: 181 RSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKM 240

Query: 436 LEE-------QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDM 488
           +         +V   E+T  +VL +C  + ALE G  VH         ++V V  AL+DM
Sbjct: 241 MMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECGKWVHSYVENNGIKVNVRVGTALVDM 300

Query: 489 YAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTF 548
           Y KCGS+ DAR VFD+M   + V+WN+MI GY +HG S E L++F  M   G +P+++TF
Sbjct: 301 YCKCGSLEDARKVFDVMEGKDVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDITF 360

Query: 549 VGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIP 608
           V VL+AC++ GL+ +G   F SM   YG+EP +EHY  MV+LLGRAG + +A  L+  + 
Sbjct: 361 VAVLTACAHAGLVSKGWEVFDSMKDGYGMEPKVEHYGCMVNLLGRAGRMQEAYDLVRSME 420

Query: 609 FQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS 668
            +P  ++W  LL AC IH+NV +G   A+ ++        T+VLLSN+YA AR+W   A 
Sbjct: 421 VEPDPVLWGTLLWACRIHSNVSLGEEIAEILVSNGLASSGTYVLLSNMYAAARNWVGVAK 480

Query: 669 -----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPD 717
                      KEPG S IE +  VH F AGD  H     I  MLE +N   ++  Y P 
Sbjct: 481 VRSMMKGSGVEKEPGCSSIEVKNRVHEFVAGDRRHPRSKDIYSMLEKMNGWLKERHYTPK 540

Query: 718 LSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISK 777
             AVL D+ E EKE+ L VHSEKLALAF L    P + I+I+KNLR+C+DCH  +KI+SK
Sbjct: 541 TDAVLHDIGEQEKEQSLEVHSEKLALAFGLISTSPGAAIKIVKNLRVCLDCHAVMKIMSK 600

Query: 778 IVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           I  R+II+RD +RFHHF++G CSC D+W
Sbjct: 601 ISGRKIIMRDRNRFHHFENGSCSCRDYW 628



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 196/399 (49%), Gaps = 48/399 (12%)

Query: 221 DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
           D F  AL+++SQM     +PN FT + +LKAC    T+  A++ H  A+K      LYV+
Sbjct: 100 DLFHHALSYYSQMLTHPIQPNAFTLSSLLKAC----TLHPARAVHSHAIKFGLSSHLYVS 155

Query: 281 VALLDLYTKSGEISNARRIFEEMPK-------------------------------KDVI 309
             L+D Y + G++++A+++F+ MP+                               KDV+
Sbjct: 156 TGLVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVV 215

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAF-------VAPNQFTFVSVLQACATMEGLDLG 362
            W+ MI  YAQ     +A+  F +M           V PN+ T V+VL +C  +  L+ G
Sbjct: 216 CWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECG 275

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
             +HS V   G+  +V V  AL+D+Y KCG +E++ ++F     ++ V WN+MI+GY   
Sbjct: 276 KWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAWNSMIMGYGIH 335

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
           G   +A+ +F +M    V  +++T+ +VL ACA    +  G +V   ++K  Y M+  V 
Sbjct: 336 GFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKGWEVFD-SMKDGYGMEPKVE 394

Query: 483 N--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
           +   ++++  + G + +A  LV  M  + + V W  ++    +H   +   ++ +++   
Sbjct: 395 HYGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLWACRIHSNVSLGEEIAEILVSN 454

Query: 540 GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           G   +  T+V +LS          G A  +SM+   G+E
Sbjct: 455 GLASSG-TYV-LLSNMYAAARNWVGVAKVRSMMKGSGVE 491



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 135/302 (44%), Gaps = 44/302 (14%)

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
           QIH+ ++R GL     ++  L   YA  G + +SV LF  +P  N   W  +I  +    
Sbjct: 41  QIHAALLRRGLHHHPILNFKLQRSYASLGHLHHSVTLFHRTPNPNVFLWTHIINAHAHFD 100

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN 483
               A+  +S+ML   +     T SS+L+AC     L P   VH   +K      + V+ 
Sbjct: 101 LFHHALSYYSQMLTHPIQPNAFTLSSLLKAC----TLHPARAVHSHAIKFGLSSHLYVST 156

Query: 484 ALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG--- 540
            L+D YA+ G +  A+ +FD M + + VS+ AM++ Y+ HG+  E   +F+ M  +    
Sbjct: 157 GLVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVC 216

Query: 541 W-----------------------------------RPNNLTFVGVLSACSNGGLLEQGE 565
           W                                   RPN +T V VLS+C   G LE G+
Sbjct: 217 WNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECGK 276

Query: 566 AYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACII 625
            +  S V N GI+  +   T++V +  + G L+ A K+ + +  +  V+ W +++    I
Sbjct: 277 -WVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGK-DVVAWNSMIMGYGI 334

Query: 626 HN 627
           H 
Sbjct: 335 HG 336



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 104/410 (25%), Positives = 166/410 (40%), Gaps = 65/410 (15%)

Query: 76  MTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVS 135
           + IH  +L++G          L   Y  L  L  +  LF   P  N   +   I  +   
Sbjct: 40  LQIHAALLRRGLHHHPILNFKLQRSYASLGHLHHSVTLFHRTPNPNVFLWTHIINAHAHF 99

Query: 136 SQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVG 195
             F  A+  +S +    H + P AFT  L  L+          V +   K G  S+ +V 
Sbjct: 100 DLFHHALSYYSQM--LTHPIQPNAFT--LSSLLKACTLHPARAVHSHAIKFGLSSHLYVS 155

Query: 196 TALIDAFSVCGCVEFARKVFDG---------------------------LF--------- 219
           T L+DA++  G V  A+K+FD                            LF         
Sbjct: 156 TGLVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVV 215

Query: 220 -----------NDCFEEALNFFSQMRAV-------GFKPNNFTFAFVLKACLGLDTIRVA 261
                      + C  EAL FF +M  +         +PN  T   VL +C  +  +   
Sbjct: 216 CWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECG 275

Query: 262 KSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQT 321
           K  H        ++++ V  AL+D+Y K G + +AR++F+ M  KDV+ W+ MI  Y   
Sbjct: 276 KWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAWNSMIMGYGIH 335

Query: 322 DLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI-HSLVVRVGLLSDVFV 380
             S +A++LF  M    V P+  TFV+VL ACA    +  G ++  S+    G+   V  
Sbjct: 336 GFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKGWEVFDSMKDGYGMEPKVEH 395

Query: 381 SNALMDVYAKCGRMENSVELF-AESPKRNHVTWNTM-----IVGYVQLGE 424
              ++++  + GRM+ + +L  +   + + V W T+     I   V LGE
Sbjct: 396 YGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLWACRIHSNVSLGE 445



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 93/387 (24%), Positives = 142/387 (36%), Gaps = 104/387 (26%)

Query: 60  ATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPE 119
           A +L S ++   L  A  +H   +K G    L+ +  L++ Y +   +  A KLFD MPE
Sbjct: 121 AFTLSSLLKACTLHPARAVHSHAIKFGLSSHLYVSTGLVDAYARGGDVASAQKLFDAMPE 180

Query: 120 RNTISFVTTIQGYTVSSQFVEAVGLFSTL-----------------HREGHEL------- 155
           R+ +S+   +  Y       EA  LF  +                 H   +E        
Sbjct: 181 RSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKM 240

Query: 156 --------------NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDA 201
                         N     A L     +G  E    V + V   G   N  VGTAL+D 
Sbjct: 241 MMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECGKWVHSYVENNGIKVNVRVGTALVDM 300

Query: 202 FSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTF 245
           +  CG +E ARKVFD +                 +   +EAL  F +M  +G KP++ TF
Sbjct: 301 YCKCGSLEDARKVFDVMEGKDVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDITF 360

Query: 246 AFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPK 305
             VL AC           AH                        +G +S    +F+ M  
Sbjct: 361 VAVLTAC-----------AH------------------------AGLVSKGWEVFDSM-- 383

Query: 306 KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF-------VAPNQFTFVSVLQACATMEG 358
           KD       +  Y      ++ +    RM++A+       V P+   + ++L AC     
Sbjct: 384 KDGYGMEPKVEHYG---CMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLWACRIHSN 440

Query: 359 LDLGNQIHSLVVRVGLLSD---VFVSN 382
           + LG +I  ++V  GL S    V +SN
Sbjct: 441 VSLGEEIAEILVSNGLASSGTYVLLSN 467


>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
          Length = 852

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 225/689 (32%), Positives = 365/689 (52%), Gaps = 27/689 (3%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +SH++   ++SC     +     +H      G   D+F  + L+ +Y     L DA ++F
Sbjct: 145 DSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVF 204

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D M ER+ + +   + GY  +     AV LF  +   G E N      FL V  +     
Sbjct: 205 DGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLF 264

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF-----------DGLFNDCF 223
               +     K G +S   V   L+  ++ C C++   K+F           +G+ + C 
Sbjct: 265 FGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCV 324

Query: 224 E-----EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
           +     +AL  F  M+  G +P++ T   +L A   L+     K  HG  ++ C  MD++
Sbjct: 325 QNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVF 384

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           +  AL+D+Y K   +  A+ +++     DV+  S MI+ Y    +S +AV++F  + +  
Sbjct: 385 LVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQG 444

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           + PN     SVL ACA+M  + LG ++HS  ++       +V +ALMD+YAKCGR++ S 
Sbjct: 445 IRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSH 504

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            +F++   ++ VTWN+MI  + Q GE  +A+ +F +M  E V  + VT SSVL ACASL 
Sbjct: 505 YIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLP 564

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           A+  G ++H + +K     D+   +ALIDMY KCG++  A  VF+ M + NEVSWN++I+
Sbjct: 565 AIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIA 624

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
            Y  +GL  E + +   MQ+ G++ +++TF+ ++SAC++ G +++G   F+ M   Y I 
Sbjct: 625 SYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIA 684

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P +EH+  MV L  RAG LDKA +LI  +PF+P   IW ALL AC +H NVE+  +++Q 
Sbjct: 685 PRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQE 744

Query: 639 ILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRA 687
           +   +P +   +VL+SNI A+A  W+  +            K PG SW++     H F A
Sbjct: 745 LFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVA 804

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIP 716
            D SH D   I   L+ + ++ R+ GYIP
Sbjct: 805 ADKSHPDSEDIYMSLKSILLELREEGYIP 833



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 165/582 (28%), Positives = 288/582 (49%), Gaps = 24/582 (4%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKG-NCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERN 121
           L+ C+    L   + +H + +  G +  D      L+ +YV   R  DA  +F  +P   
Sbjct: 46  LRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRGA 105

Query: 122 ---TISFVTTIQGYTVSSQFVEAVGLFSTL--HREGHELNPFAFTAFLKVLVSMGWAELC 176
               + +   I+G T++  +  A+  +  +  H      +   F   +K   ++G   L 
Sbjct: 106 AACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALG 165

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF-NDC------------- 222
             V      LG D + FVG+ALI  ++  G +  AR+VFDG+   DC             
Sbjct: 166 RLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKA 225

Query: 223 --FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
                A+  F  MRA G +PN  T A  L        +      H  A+K   E ++ VA
Sbjct: 226 GSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVA 285

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
             L+ +Y K   + +  ++F  MP+ D++ W+ MI+   Q      A+ LFC M+++ + 
Sbjct: 286 NTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIR 345

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           P+  T VS+L A   + G + G ++H  +VR  +  DVF+ +AL+D+Y KC  +  +  +
Sbjct: 346 PDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSV 405

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           +  S   + V  +TMI GYV  G   +A+ MF  +LE+ +    V  +SVL ACAS+AA+
Sbjct: 406 YDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAM 465

Query: 461 EPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY 520
           + G ++H   +K  Y+    V +AL+DMYAKCG +  +  +F  ++  +EV+WN+MIS +
Sbjct: 466 KLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSF 525

Query: 521 SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPC 580
           + +G   E L +F  M   G + +N+T   VLSAC++   +  G+     +V    I   
Sbjct: 526 AQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKE-IHGVVIKGPIRAD 584

Query: 581 IEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           +   ++++ + G+ G+L+ A ++ E +P +  V  W +++ +
Sbjct: 585 LFAESALIDMYGKCGNLEWAHRVFESMPEKNEVS-WNSIIAS 625



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 133/490 (27%), Positives = 235/490 (47%), Gaps = 20/490 (4%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N  + A  L       DL   + +H   +K G   ++   N L+++Y K   L D  K
Sbjct: 244 EPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWK 303

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFV-EAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
           LF  MP  + +++   I G  V + FV +A+ LF  + + G   +     + L  L  + 
Sbjct: 304 LFGLMPRDDLVTWNGMISG-CVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLN 362

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG-------------- 217
                  +   + +     + F+ +AL+D +  C  V  A+ V+D               
Sbjct: 363 GFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMIS 422

Query: 218 --LFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
             + N   +EA+  F  +   G +PN    A VL AC  +  +++ +  H  ALK  YE 
Sbjct: 423 GYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEG 482

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
             YV  AL+D+Y K G +  +  IF ++  KD + W+ MI+ +AQ     +A+ LF  M 
Sbjct: 483 RCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMC 542

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
              V  +  T  SVL ACA++  +  G +IH +V++  + +D+F  +AL+D+Y KCG +E
Sbjct: 543 MEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLE 602

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
            +  +F   P++N V+WN++I  Y   G V +++ +   M EE   A  VT+ +++ ACA
Sbjct: 603 WAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACA 662

Query: 456 SLAALEPGMQV-HCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSW 513
               ++ G+++  C+T +      +     ++D+Y++ G +  A  L+ DM    +   W
Sbjct: 663 HAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIW 722

Query: 514 NAMISGYSMH 523
            A++    +H
Sbjct: 723 GALLHACRVH 732



 Score = 43.1 bits (100), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 8/187 (4%)

Query: 449 SVLRACASLAALEPGMQVHCLTVKAN-YDMDVVVANALIDMYAKCGSITDARLVFDMMND 507
           +VLR C S + L  G+QVH   V A  +  D  +   L+ MY       DA  VF  +  
Sbjct: 44  AVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPR 103

Query: 508 WN---EVSWNAMISGYSMHGLSAEVLKVFDLM--QQRGWRPNNLTFVGVLSACSNGGLLE 562
                 + WN +I G +M G     L  +  M        P++ TF  V+ +C+  G + 
Sbjct: 104 GAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIA 163

Query: 563 QGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
            G    ++     G++  +   ++++ +    G L  A ++ +G+  +  V+ W  ++  
Sbjct: 164 LGRLVHRT-ARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVL-WNVMMDG 221

Query: 623 CIIHNNV 629
            +   +V
Sbjct: 222 YVKAGSV 228


>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 758

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 227/666 (34%), Positives = 353/666 (53%), Gaps = 40/666 (6%)

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDC 222
           V   V K G   N FV + L++ ++ CG +E AR+VFD +                 N  
Sbjct: 89  VHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLRRNVVAWTTLMVGFVQNSQ 148

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
            + A++ F +M   G  P+ +T + VL AC  L ++++    H   +K   + D  V  A
Sbjct: 149 PKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASVGSA 208

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L  LY+K G + +A + F  + +K+VI W+  ++  A     +  + LF  M    + PN
Sbjct: 209 LCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPN 268

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           +FT  S L  C  +  L+LG Q++SL ++ G  S++ V N+L+ +Y K G +  +  LF 
Sbjct: 269 EFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFN 328

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGK-----------AMIMFSKMLEEQVPATEVTYSSVL 451
                + VTWN MI G+ Q+ E+ K           A+ +FSK+    +     T SSVL
Sbjct: 329 RMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSVL 388

Query: 452 RACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEV 511
             C+ + A+E G Q+H  T+K  +  DV+V+ +LI MY+KCGSI  A   F  M+    +
Sbjct: 389 SVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTRTMI 448

Query: 512 SWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSM 571
           +W +MI+G+S HG+S + L +F+ M   G RPN +TFVGVLSACS+ G++ Q   YF+ M
Sbjct: 449 AWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQALNYFEIM 508

Query: 572 VANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEI 631
              Y I+P ++HY  MV +  R G L++A   I+ + ++PS  IW   +  C  H N+E+
Sbjct: 509 QKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCKSHGNLEL 568

Query: 632 GRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQG 680
           G  +A+ +L  +P+D  T+VLL N+Y  A  +E  +            K    SWI  + 
Sbjct: 569 GFYAAEQLLSLKPKDPETYVLLLNMYLSAERFEDVSRVRKMMEEEKVGKLKDWSWISIKD 628

Query: 681 MVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGY--IPDLSAVLRDVREDEKERYLWVHS 738
            V+ F+    +H   ++I   LE L  K +  GY  +  +     +  E++       HS
Sbjct: 629 KVYSFKTNGKTHPQSSLICKSLEDLLAKVKNVGYEMLESVEISDEEEEEEKTSSPNIYHS 688

Query: 739 EKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGC 798
           EKLA+ F L  +P SSPIR++K+  IC D H  IK +S +  REII++D  R H F +G 
Sbjct: 689 EKLAITFGLENLPNSSPIRVVKSTLICRDSHNFIKYVSTLAGREIIVKDSKRLHKFANGE 748

Query: 799 CSCGDF 804
           CSCG+F
Sbjct: 749 CSCGNF 754



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 146/496 (29%), Positives = 235/496 (47%), Gaps = 31/496 (6%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           Y   LQ C+          +H  V+K G   + F  + L+NVY K   + DA ++FD M 
Sbjct: 70  YVPLLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNML 129

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
            RN +++ T + G+  +SQ   A+ +F  +   G   + +  +A L    S+   +L   
Sbjct: 130 RRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQ 189

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDC 222
             A + K   D +A VG+AL   +S CG +E A K F  +                 N  
Sbjct: 190 FHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGA 249

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
             + L  F +M AV  KPN FT    L  C  + ++ +    +   +K  YE +L V  +
Sbjct: 250 PVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNS 309

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQ-TDLSID----------AVELF 331
           LL LY KSG I  A R+F  M    ++ W+ MIA +AQ  +L+ D          A++LF
Sbjct: 310 LLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLF 369

Query: 332 CRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC 391
            ++  + + P+ FT  SVL  C+ M  ++ G QIH+  ++ G LSDV VS +L+ +Y+KC
Sbjct: 370 SKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKC 429

Query: 392 GRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVL 451
           G +E + + F E   R  + W +MI G+ Q G   +A+ +F  M    V    VT+  VL
Sbjct: 430 GSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVL 489

Query: 452 RACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDARLVFDMMN-DW 508
            AC+    +   +    +  K  Y +   + +   ++DM+ + G +  A      MN + 
Sbjct: 490 SACSHAGMVSQALNYFEIMQK-KYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEP 548

Query: 509 NEVSWNAMISGYSMHG 524
           +E  W+  I+G   HG
Sbjct: 549 SEFIWSNFIAGCKSHG 564



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 201/366 (54%), Gaps = 12/366 (3%)

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
           +L+ CL   +    +  HG  +KT    + +V   L+++Y K G + +ARR+F+ M +++
Sbjct: 73  LLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLRRN 132

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
           V+ W+ ++  + Q      A+ +F  M  A   P+ +T  +VL AC++++ L LG+Q H+
Sbjct: 133 VVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHA 192

Query: 368 LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK 427
            +++  +  D  V +AL  +Y+KCGR+E++++ F+   ++N ++W + +      G   K
Sbjct: 193 YIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGAPVK 252

Query: 428 AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALID 487
            + +F +M+   +   E T +S L  C  + +LE G QV+ L +K  Y+ ++ V N+L+ 
Sbjct: 253 GLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLY 312

Query: 488 MYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM------HGLSA-----EVLKVFDLM 536
           +Y K G I +A  +F+ M+D + V+WNAMI+G++         LSA     E LK+F  +
Sbjct: 313 LYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKL 372

Query: 537 QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGH 596
              G +P+  T   VLS CS    +EQGE      +    +   I   TS++S+  + G 
Sbjct: 373 NLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVS-TSLISMYSKCGS 431

Query: 597 LDKAAK 602
           +++A+K
Sbjct: 432 IERASK 437



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 143/277 (51%), Gaps = 2/277 (0%)

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           +V +LQ C           +H  V++ G   + FV + L++VYAKCG ME++  +F    
Sbjct: 70  YVPLLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNML 129

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
           +RN V W T++VG+VQ  +   A+ +F +ML      +  T S+VL AC+SL +L+ G Q
Sbjct: 130 RRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQ 189

Query: 466 VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGL 525
            H   +K + D D  V +AL  +Y+KCG + DA   F  + + N +SW + +S  + +G 
Sbjct: 190 FHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGA 249

Query: 526 SAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYT 585
             + L++F  M     +PN  T    LS C     LE G   + S+   +G E  +    
Sbjct: 250 PVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVY-SLCIKFGYESNLRVRN 308

Query: 586 SMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           S++ L  ++G + +A +L   +    S++ W A++  
Sbjct: 309 SLLYLYLKSGCIVEAHRLFNRMD-DASMVTWNAMIAG 344



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 124/505 (24%), Positives = 208/505 (41%), Gaps = 73/505 (14%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
           ++ +  L +C     L+     H  ++K     D    + L ++Y K  RL DA K F  
Sbjct: 169 YTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSR 228

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
           + E+N IS+ + +     +   V+ + LF  +     + N F  T+ L     +   EL 
Sbjct: 229 IREKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELG 288

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL------------------ 218
             V++   K G++SN  V  +L+  +   GC+  A ++F+ +                  
Sbjct: 289 TQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQM 348

Query: 219 -------FNDCFE--EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCAL 269
                   + C    EAL  FS++   G KP+ FT + VL  C  +  I   +  H   +
Sbjct: 349 MELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTI 408

Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVE 329
           KT +  D+ V+ +L+ +Y+K G I  A + F EM  + +I W+ MI  ++Q  +S  A+ 
Sbjct: 409 KTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALH 468

Query: 330 LFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYA 389
           +F  M  A V PN  TFV VL AC+                  G++S       +M    
Sbjct: 469 IFEDMSLAGVRPNAVTFVGVLSACS----------------HAGMVSQALNYFEIMQKKY 512

Query: 390 KCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSS 449
           K              P  +H  +  M+  +V+LG + +A+    KM  E    +E  +S+
Sbjct: 513 KI------------KPAMDH--YECMVDMFVRLGRLEQALNFIKKMNYE---PSEFIWSN 555

Query: 450 VLRACASLAALEPGMQV--HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMM-- 505
            +  C S   LE G       L++K   D +  V   L++MY       D   V  MM  
Sbjct: 556 FIAGCKSHGNLELGFYAAEQLLSLKPK-DPETYV--LLLNMYLSAERFEDVSRVRKMMEE 612

Query: 506 ------NDWNEVSWNAMISGYSMHG 524
                  DW+ +S    +  +  +G
Sbjct: 613 EKVGKLKDWSWISIKDKVYSFKTNG 637



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/342 (22%), Positives = 129/342 (37%), Gaps = 74/342 (21%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +  ++L  C +   L+    ++   +K G   +L   N LL +Y+K   + +A +LF
Sbjct: 268 NEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLF 327

Query: 115 DEMPERNTISFVTTIQGYTVSSQFV-----------EAVGLFSTLHREGHELNPFAFTAF 163
           + M + + +++   I G+    +             EA+ LFS L+  G + + F  ++ 
Sbjct: 328 NRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSV 387

Query: 164 LKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF 223
           L V   M   E    + A   K G  S+  V T+LI  +S CG +E A K F  +     
Sbjct: 388 LSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTRTM 447

Query: 224 ----------------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGC 267
                           ++AL+ F  M   G +PN  TF  VL AC               
Sbjct: 448 IAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSAC--------------- 492

Query: 268 ALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDA 327
                               + +G +S A   FE M KK  I  +         +  +D 
Sbjct: 493 --------------------SHAGMVSQALNYFEIMQKKYKIKPAM-----DHYECMVDM 527

Query: 328 VELFCRMRQAF-------VAPNQFTFVSVLQACATMEGLDLG 362
                R+ QA          P++F + + +  C +   L+LG
Sbjct: 528 FVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCKSHGNLELG 569


>gi|302796918|ref|XP_002980220.1| hypothetical protein SELMODRAFT_112433 [Selaginella moellendorffii]
 gi|300151836|gb|EFJ18480.1| hypothetical protein SELMODRAFT_112433 [Selaginella moellendorffii]
          Length = 739

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 237/682 (34%), Positives = 362/682 (53%), Gaps = 69/682 (10%)

Query: 187 GHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFF 230
           G D++ ++G  L+  +   G ++ A   FD +                 N    EAL  F
Sbjct: 64  GLDADTYLGNNLVRVYGKFGGLDRAWAAFDRIAAKNVFSWTIVISAFAQNGHHREALVLF 123

Query: 231 SQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKS 290
            QM   G K N  T A VL  C  +  +   +S HG  +    + D+ +  AL+++Y+K 
Sbjct: 124 RQMEREGVKANEVTLAAVLGICSSIKDLAGGRSIHGRVIAA--KKDVVIGNALVNMYSKC 181

Query: 291 GEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVL 350
           G +  AR  F+EM  +DV+ W+ MI   ++     +AVE+F  M    VAPN+ + ++VL
Sbjct: 182 GSLREARASFQEMVVRDVVSWTTMITALSEHGEWNEAVEIFWEMVSENVAPNEISCLAVL 241

Query: 351 QACATMEGLDLGNQIHSLVVRVGLLSD--VFVSNALMDVYAKCGRMENSVELFA--ESPK 406
            AC+ +        IH  +   GL  D  + V+N L+  Y +CG   ++  +F   +   
Sbjct: 242 GACSNLGDRSQVRVIHEFIASGGLELDKKLVVANTLIHTYGRCGSPSDARRVFDSLQHSA 301

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKML--EEQVPATEVTYSSVLRACASLAALEPGM 464
           RN V+W +MI  Y    +    + ++ +M+  EE      V Y  VL AC+SL+AL+ G 
Sbjct: 302 RNAVSWASMIAAYTSNEQAKAGVELYQEMIQREESKKMDPVAYLCVLEACSSLSALKVGR 361

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
           QVH   V A +  ++ +A A+++MY KCGS+ +AR VFD M   N ++WN+M+ GY+ HG
Sbjct: 362 QVHEEIVAAGFGDELPLAGAIVNMYCKCGSLVEAREVFDGMKARNMIAWNSMMGGYTQHG 421

Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY 584
                L++F+L    G  P+ +TFV +L+ACS+ G+++ G  +F S+ A++G+EP ++HY
Sbjct: 422 HPKRALQLFELACLDGVLPDEITFVTILTACSHAGMVKPGVWHFGSIRADFGMEPSVDHY 481

Query: 585 TSMVSLLGRAGHLDKAAKLIEGIP--------FQPSVMIWRALLGACIIHNNVE-IGRLS 635
             MV +LGRAG LD A +L+E +P        F P    W ALL +C +H +V+   R+S
Sbjct: 482 VCMVDMLGRAGWLDAAERLVERMPAFSNPADEFVP----WMALLASCKVHTDVKRAARIS 537

Query: 636 AQHILDFE---------------PEDEATHVLLSNIYAMARSWEKA-------------- 666
           +      +                   A  V+LSNIYA A+ WE+               
Sbjct: 538 SVLSAKKKKLLSSSSSGSGSWHLKNSAAPLVMLSNIYAQAKKWEEMTGVRNEITEEWSKG 597

Query: 667 --ASKEPGLSWIENQGMVHYFRAGDTS-HADMNIIRGMLEWLNMKSRKAGYIPDLSAVLR 723
              S++ G S+IE +G +H F AG    H +   I   ++ L    + AGY+PD S V+ 
Sbjct: 598 MITSRQRGCSFIEVEGAIHEFVAGKLHLHPEHKGIDSEMKRLEELIKSAGYVPDTSVVMH 657

Query: 724 DVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREI 783
           DV E EKE  L  HSE++A+AF L +    + +R++ NLRIC DCH A+K+ISK V REI
Sbjct: 658 DVEEAEKEGVLHQHSERMAIAFGLMRGGSDTIVRVVNNLRICSDCHAAVKLISKTVGREI 717

Query: 784 IIRDVHRFHHFQDGCCSCGDFW 805
           ++RD  RFHHF  G CSC D+W
Sbjct: 718 LVRDTRRFHHFASGECSCQDYW 739



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 125/481 (25%), Positives = 225/481 (46%), Gaps = 32/481 (6%)

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
           L     +HC+++ +G   D +  N L+ VY K   L  A   FD +  +N  S+   I  
Sbjct: 50  LAAVEELHCRMIAQGLDADTYLGNNLVRVYGKFGGLDRAWAAFDRIAAKNVFSWTIVISA 109

Query: 132 YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSN 191
           +  +    EA+ LF  + REG + N     A L +  S+        +   V     D  
Sbjct: 110 FAQNGHHREALVLFRQMEREGVKANEVTLAAVLGICSSIKDLAGGRSIHGRVIAAKKD-- 167

Query: 192 AFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRA 235
             +G AL++ +S CG +  AR  F  +                 +  + EA+  F +M +
Sbjct: 168 VVIGNALVNMYSKCGSLREARASFQEMVVRDVVSWTTMITALSEHGEWNEAVEIFWEMVS 227

Query: 236 VGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD--LYVAVALLDLYTKSGEI 293
               PN  +   VL AC  L      +  H        E+D  L VA  L+  Y + G  
Sbjct: 228 ENVAPNEISCLAVLGACSNLGDRSQVRVIHEFIASGGLELDKKLVVANTLIHTYGRCGSP 287

Query: 294 SNARRIFEEM--PKKDVIPWSFMIARYAQTDLSIDAVELFCRM--RQAFVAPNQFTFVSV 349
           S+ARR+F+ +    ++ + W+ MIA Y   + +   VEL+  M  R+     +   ++ V
Sbjct: 288 SDARRVFDSLQHSARNAVSWASMIAAYTSNEQAKAGVELYQEMIQREESKKMDPVAYLCV 347

Query: 350 LQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNH 409
           L+AC+++  L +G Q+H  +V  G   ++ ++ A++++Y KCG +  + E+F     RN 
Sbjct: 348 LEACSSLSALKVGRQVHEEIVAAGFGDELPLAGAIVNMYCKCGSLVEAREVFDGMKARNM 407

Query: 410 VTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCL 469
           + WN+M+ GY Q G   +A+ +F     + V   E+T+ ++L AC+    ++PG+  H  
Sbjct: 408 IAWNSMMGGYTQHGHPKRALQLFELACLDGVLPDEITFVTILTACSHAGMVKPGVW-HFG 466

Query: 470 TVKANYDMDVVVAN--ALIDMYAKCGSITDARLVFDMM----NDWNE-VSWNAMISGYSM 522
           +++A++ M+  V +   ++DM  + G +  A  + + M    N  +E V W A+++   +
Sbjct: 467 SIRADFGMEPSVDHYVCMVDMLGRAGWLDAAERLVERMPAFSNPADEFVPWMALLASCKV 526

Query: 523 H 523
           H
Sbjct: 527 H 527



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 138/273 (50%), Gaps = 6/273 (2%)

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
            ++H  ++  GL +D ++ N L+ VY K G ++ +   F     +N  +W  +I  + Q 
Sbjct: 54  EELHCRMIAQGLDADTYLGNNLVRVYGKFGGLDRAWAAFDRIAAKNVFSWTIVISAFAQN 113

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
           G   +A+++F +M  E V A EVT ++VL  C+S+  L  G  +H   + A    DVV+ 
Sbjct: 114 GHHREALVLFRQMEREGVKANEVTLAAVLGICSSIKDLAGGRSIHGRVIAAKK--DVVIG 171

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
           NAL++MY+KCGS+ +AR  F  M   + VSW  MI+  S HG   E +++F  M      
Sbjct: 172 NALVNMYSKCGSLREARASFQEMVVRDVVSWTTMITALSEHGEWNEAVEIFWEMVSENVA 231

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE--PCIEHYTSMVSLLGRAGHLDKA 600
           PN ++ + VL ACSN G   Q        +A+ G+E    +    +++   GR G    A
Sbjct: 232 PNEISCLAVLGACSNLGDRSQVRV-IHEFIASGGLELDKKLVVANTLIHTYGRCGSPSDA 290

Query: 601 AKLIEGIPFQP-SVMIWRALLGACIIHNNVEIG 632
            ++ + +     + + W +++ A   +   + G
Sbjct: 291 RRVFDSLQHSARNAVSWASMIAAYTSNEQAKAG 323



 Score = 45.1 bits (105), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 44/88 (50%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +Y   L++C     L+    +H +++  G   +L     ++N+Y K   L +A ++FD M
Sbjct: 343 AYLCVLEACSSLSALKVGRQVHEEIVAAGFGDELPLAGAIVNMYCKCGSLVEAREVFDGM 402

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLF 145
             RN I++ + + GYT       A+ LF
Sbjct: 403 KARNMIAWNSMMGGYTQHGHPKRALQLF 430


>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 1000

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 233/728 (32%), Positives = 376/728 (51%), Gaps = 28/728 (3%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N++++AT +  C   ++    + +  QV+  G    +   N L+ ++  L R+ DA KLF
Sbjct: 144 NANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLF 203

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D M E +TIS+   I  Y+      +   +FS +   G   +     + + V  S     
Sbjct: 204 DRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFS 263

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF---------------DGLF 219
               + +   +   DS+  V  AL++ +S  G +  A  +F                   
Sbjct: 264 HGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYV 323

Query: 220 NDCFE-EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            +C   +AL    Q+      PN+ TF+  L AC     +   K  H   L+   + +L 
Sbjct: 324 QNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLL 383

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           V  +L+ +Y K   + +A ++F+ MP  D++ ++ +I  YA  +    A+++F  MR A 
Sbjct: 384 VGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAG 443

Query: 339 VAPNQFTFVSVLQACATMEGL-DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
           + PN  T +++  + A+   L + G  +H+ ++R G LSD +V+N+L+ +YAKCG +E+S
Sbjct: 444 IKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESS 503

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
             +F     +N V+WN +I   VQLG   +A+ +F  M         V  +  L +CASL
Sbjct: 504 TNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASL 563

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
           A+LE GMQ+H L +K+  D D  V NA +DMY KCG + +   V        +  WN +I
Sbjct: 564 ASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLI 623

Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
           SGY+ +G   E  + F  M   G +P+ +TFV +LSACS+ GL+++G  Y+ SM +++G+
Sbjct: 624 SGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGV 683

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQ 637
            P I+H   +V LLGR G   +A K IE +P  P+ +IWR+LL +   H N+EIGR +A+
Sbjct: 684 SPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKTAK 743

Query: 638 HILDFEPEDEATHVLLSNIYAMARSWEKA-----------ASKEPGLSWIENQGMVHYFR 686
            +L+ +P D++ +VLLSN+YA    W               +K P  SW++ +  V  F 
Sbjct: 744 KLLELDPFDDSAYVLLSNLYATNARWADVDKLRSHMKTININKRPACSWLKLKNEVSTFG 803

Query: 687 AGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFA 746
            GD  H     I   L+ + +K R+ GYI D S+ L D  E++KE+ LW HSEKLALA+ 
Sbjct: 804 IGDRGHKHAEKIYAKLDEMLLKLREVGYIADTSSALHDTDEEQKEQNLWNHSEKLALAYG 863

Query: 747 LFKMPPSS 754
           L  +P  S
Sbjct: 864 LIVVPEGS 871



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 157/591 (26%), Positives = 281/591 (47%), Gaps = 27/591 (4%)

Query: 51  VSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDA 110
           +S F   S  T+ +   +++ +     IH    + G   +++    LL++Y     + DA
Sbjct: 39  LSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDA 98

Query: 111 TKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSM 170
            +LF EMPERN +S+   +   + +    EA+  +  + R+G   N  AF   + +  S+
Sbjct: 99  QRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSL 158

Query: 171 GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-------------- 216
                   V + V   G  +   V  +LI  F   G V  A K+FD              
Sbjct: 159 ENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMI 218

Query: 217 ------GLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALK 270
                 G+ + CF      FS MR  G +P+  T   ++  C   D        H   L+
Sbjct: 219 SMYSHQGICSKCFL----VFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLR 274

Query: 271 TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVEL 330
           +  +  + V  AL+++Y+ +G++S+A  +F  M ++D+I W+ MI+ Y Q   S DA++ 
Sbjct: 275 SSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKT 334

Query: 331 FCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAK 390
             ++     +PN  TF S L AC++   L  G  +H++V+++ L  ++ V N+L+ +Y K
Sbjct: 335 LGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGK 394

Query: 391 CGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
           C  ME++ ++F   P  + V++N +I GY  L +  KAM +FS M    +    +T  ++
Sbjct: 395 CNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINI 454

Query: 451 LRACASLAALEP-GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWN 509
             + AS   L   G  +H   ++  +  D  VAN+LI MYAKCG++  +  +F+ + + N
Sbjct: 455 HGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKN 514

Query: 510 EVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFK 569
            VSWNA+I+     G   E LK+F  MQ  G + + +     LS+C++   LE+G     
Sbjct: 515 IVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEG-MQLH 573

Query: 570 SMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
            +    G++       + + + G+ G +D+  +++     +P    W  L+
Sbjct: 574 GLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQ-QCWNTLI 623



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 137/535 (25%), Positives = 249/535 (46%), Gaps = 25/535 (4%)

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
           M +R   ++ T + G     +   A  +   +   G  L+ FA  + +      G  E  
Sbjct: 1   MADRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGI 60

Query: 177 PC---VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL--------------- 218
            C   + A  ++ G   N ++GTAL+  +   G V  A+++F  +               
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVAL 120

Query: 219 -FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
             N   EEAL  + QMR  G   N   FA V+  C  L+            + +  +  +
Sbjct: 121 SSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQV 180

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
            VA +L+ ++   G + +A ++F+ M + D I W+ MI+ Y+   +      +F  MR  
Sbjct: 181 SVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHH 240

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            + P+  T  S++  CA+ +    G+ IHSL +R  L S V V NAL+++Y+  G++ ++
Sbjct: 241 GLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDA 300

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
             LF    +R+ ++WNTMI  YVQ      A+    ++         +T+SS L AC+S 
Sbjct: 301 EFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSP 360

Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
            AL  G  VH + ++ +   +++V N+LI MY KC S+ DA  VF  M   + VS+N +I
Sbjct: 361 GALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLI 420

Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
            GY++     + ++VF  M+  G +PN +T + +  + ++   L        + +   G 
Sbjct: 421 GGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGF 480

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIG 632
                   S++++  + G+L+ +  +   I    +++ W A++ A     NV++G
Sbjct: 481 LSDEYVANSLITMYAKCGNLESSTNIFNSIT-NKNIVSWNAIIAA-----NVQLG 529


>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
          Length = 1215

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 233/728 (32%), Positives = 376/728 (51%), Gaps = 28/728 (3%)

Query: 55   NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
            N++++AT +  C   ++    + +  QV+  G    +   N L+ ++  L R+ DA KLF
Sbjct: 446  NANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLF 505

Query: 115  DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
            D M E +TIS+   I  Y+      +   +FS +   G   +     + + V  S     
Sbjct: 506  DRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFS 565

Query: 175  LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF---------------DGLF 219
                + +   +   DS+  V  AL++ +S  G +  A  +F                   
Sbjct: 566  HGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYV 625

Query: 220  NDCFE-EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
             +C   +AL    Q+      PN+ TF+  L AC     +   K  H   L+   + +L 
Sbjct: 626  QNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLL 685

Query: 279  VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
            V  +L+ +Y K   + +A ++F+ MP  D++ ++ +I  YA  +    A+++F  MR A 
Sbjct: 686  VGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAG 745

Query: 339  VAPNQFTFVSVLQACATMEGL-DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            + PN  T +++  + A+   L + G  +H+ ++R G LSD +V+N+L+ +YAKCG +E+S
Sbjct: 746  IKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESS 805

Query: 398  VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
              +F     +N V+WN +I   VQLG   +A+ +F  M         V  +  L +CASL
Sbjct: 806  TNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASL 865

Query: 458  AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
            A+LE GMQ+H L +K+  D D  V NA +DMY KCG + +   V        +  WN +I
Sbjct: 866  ASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLI 925

Query: 518  SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
            SGY+ +G   E  + F  M   G +P+ +TFV +LSACS+ GL+++G  Y+ SM +++G+
Sbjct: 926  SGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGV 985

Query: 578  EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQ 637
             P I+H   +V LLGR G   +A K IE +P  P+ +IWR+LL +   H N+EIGR +A+
Sbjct: 986  SPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKTAK 1045

Query: 638  HILDFEPEDEATHVLLSNIYAMARSWEKA-----------ASKEPGLSWIENQGMVHYFR 686
             +L+ +P D++ +VLLSN+YA    W               +K P  SW++ +  V  F 
Sbjct: 1046 KLLELDPFDDSAYVLLSNLYATNARWADVDKLRSHMKTININKRPACSWLKLKNEVSTFG 1105

Query: 687  AGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFA 746
             GD  H     I   L+ + +K R+ GYI D S+ L D  E++KE+ LW HSEKLALA+ 
Sbjct: 1106 IGDRGHKHAEKIYAKLDEMLLKLREVGYIADTSSALHDTDEEQKEQNLWNHSEKLALAYG 1165

Query: 747  LFKMPPSS 754
            L  +P  S
Sbjct: 1166 LIVVPEGS 1173



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 157/591 (26%), Positives = 281/591 (47%), Gaps = 27/591 (4%)

Query: 51  VSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDA 110
           +S F   S  T+ +   +++ +     IH    + G   +++    LL++Y     + DA
Sbjct: 341 LSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDA 400

Query: 111 TKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSM 170
            +LF EMPERN +S+   +   + +    EA+  +  + R+G   N  AF   + +  S+
Sbjct: 401 QRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSL 460

Query: 171 GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-------------- 216
                   V + V   G  +   V  +LI  F   G V  A K+FD              
Sbjct: 461 ENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMI 520

Query: 217 ------GLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALK 270
                 G+ + CF      FS MR  G +P+  T   ++  C   D        H   L+
Sbjct: 521 SMYSHQGICSKCFL----VFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLR 576

Query: 271 TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVEL 330
           +  +  + V  AL+++Y+ +G++S+A  +F  M ++D+I W+ MI+ Y Q   S DA++ 
Sbjct: 577 SSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKT 636

Query: 331 FCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAK 390
             ++     +PN  TF S L AC++   L  G  +H++V+++ L  ++ V N+L+ +Y K
Sbjct: 637 LGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGK 696

Query: 391 CGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
           C  ME++ ++F   P  + V++N +I GY  L +  KAM +FS M    +    +T  ++
Sbjct: 697 CNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINI 756

Query: 451 LRACASLAALEP-GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWN 509
             + AS   L   G  +H   ++  +  D  VAN+LI MYAKCG++  +  +F+ + + N
Sbjct: 757 HGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKN 816

Query: 510 EVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFK 569
            VSWNA+I+     G   E LK+F  MQ  G + + +     LS+C++   LE+G     
Sbjct: 817 IVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEG-MQLH 875

Query: 570 SMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
            +    G++       + + + G+ G +D+  +++     +P    W  L+
Sbjct: 876 GLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQ-QCWNTLI 925



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 150/577 (25%), Positives = 265/577 (45%), Gaps = 28/577 (4%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT---KLFDEMPERNTISFVTTIQGYTV 134
           IH   ++    L  F  N LL  Y +      A     LFDEM +R   ++ T + G   
Sbjct: 261 IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 320

Query: 135 SSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC---VFACVYKLGHDSN 191
                +A  +   +   G  L+ FA  + +      G  E   C   + A  ++ G   N
Sbjct: 321 CGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGN 380

Query: 192 AFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRA 235
            ++GTAL+  +   G V  A+++F  +                 N   EEAL  + QMR 
Sbjct: 381 VYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRR 440

Query: 236 VGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISN 295
            G   N   FA V+  C  L+            + +  +  + VA +L+ ++   G + +
Sbjct: 441 DGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHD 500

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACAT 355
           A ++F+ M + D I W+ MI+ Y+   +      +F  MR   + P+  T  S++  CA+
Sbjct: 501 AEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCAS 560

Query: 356 MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTM 415
            +    G+ IHSL +R  L S V V NAL+++Y+  G++ ++  LF    +R+ ++WNTM
Sbjct: 561 SDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTM 620

Query: 416 IVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY 475
           I  YVQ      A+    ++         +T+SS L AC+S  AL  G  VH + ++ + 
Sbjct: 621 ISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSL 680

Query: 476 DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDL 535
             +++V N+LI MY KC S+ DA  VF  M   + VS+N +I GY++     + ++VF  
Sbjct: 681 QRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSW 740

Query: 536 MQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAG 595
           M+  G +PN +T + +  + ++   L        + +   G         S++++  + G
Sbjct: 741 MRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCG 800

Query: 596 HLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIG 632
           +L+ +  +   I    +++ W A++ A     NV++G
Sbjct: 801 NLESSTNIFNSIT-NKNIVSWNAIIAA-----NVQLG 831



 Score = 46.2 bits (108), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 66/151 (43%), Gaps = 8/151 (5%)

Query: 265 HGCALKTCYEMDLYVAVALLDLYTKSGEISNAR---RIFEEMPKKDVIPWSFMIARYAQT 321
           HG A++    +  +    LL  Y +  + S A     +F+EM  +    W   ++   + 
Sbjct: 39  HGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVRC 98

Query: 322 DLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM---EGLDLGNQIHSLVVRVGLLSDV 378
                A E+   MR+  V  + F   S++ AC      EG+  G  IH+L  R GL+ +V
Sbjct: 99  GRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGNV 158

Query: 379 FVSNALMDVYAKCGRMENSVELFAESPKRNH 409
           ++  AL+ +     R   +++  + SP   H
Sbjct: 159 YIGRALLHLPQI--RRREALDAVSLSPSSAH 187


>gi|302785459|ref|XP_002974501.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
 gi|300158099|gb|EFJ24723.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
          Length = 635

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 210/582 (36%), Positives = 325/582 (55%), Gaps = 17/582 (2%)

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           P+    A+ L+ C     I   K  H   +   ++   Y+   L+++Y K G +  A+ +
Sbjct: 55  PSAEVLAWYLRRCGSEAAIAEGKRIHYHIVLCGFKSSRYLCNLLVEMYGKCGSLQAAKSV 114

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL 359
           F   P+++V  W+ M+A +A     +DA+ L   M    ++PN  TF+ +L A A +  L
Sbjct: 115 FHITPRRNVFSWTIMVAAFAHNGHYMDALNLLEIMDLEGISPNSITFIELLGAVAALSWL 174

Query: 360 DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGY 419
           D G  +H  +   G L+D+FV+N L+++YAKC  + ++  +F     R+ + W  ++  Y
Sbjct: 175 DRGRALHRRIACCGFLADIFVANCLINMYAKCRSLADACSVFESLTSRSVIAWTALVAAY 234

Query: 420 VQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDV 479
              G    A+ +F  M  + V  TEVT+ +V+  CA +A    G +VH + + A  + +V
Sbjct: 235 ALNGFFRDALKVFLLMTLDGVEPTEVTFVTVVDVCADIAVFGIGREVHGV-IDARSEANV 293

Query: 480 VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
            V NALI+MY KC S  +AR VFD M   + ++WN+MI+ Y  +G   + L+++  MQ+ 
Sbjct: 294 CVGNALINMYGKCASPDEARKVFDAMQRKDIITWNSMIAVYGQNGYGFQALEIYKRMQES 353

Query: 540 -----GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
                G   +++TF+GVL ACS+ GL++     + SM+ +YG +P       ++ LLGRA
Sbjct: 354 RMTILGITHDDITFIGVLFACSHAGLVKDSCKLYSSMIGDYGFKPTSLQCGCLIDLLGRA 413

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLS 654
           G LD+A + I  +P+ P   IW  LLGACI H +VE    +A  I+   P D  ++V LS
Sbjct: 414 GWLDEAEEFINSMPYHPDHTIWTILLGACITHADVERAARAADRIMALRPTDSGSYVALS 473

Query: 655 NIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLE 703
           N+YA+A  W+  A            K  G S IE  G++H F AGDTSH     I   L 
Sbjct: 474 NLYALAERWDDMARMRKLMDQRGVFKMAGKSSIEIGGVLHEFIAGDTSHPRKREIYEELR 533

Query: 704 WLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLR 763
            +    R+ GY+PD+ AVL +   + KE+    HSE+LA+AF +   P  + +RI+KNLR
Sbjct: 534 RIEGVIRERGYVPDIKAVLHNAAREAKEKMCCFHSERLAIAFGMISSPGGTELRIMKNLR 593

Query: 764 ICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +C DCH+A KIISK   R+II+RD +RFH F++G CSC D+W
Sbjct: 594 VCPDCHSATKIISKFSGRKIIVRDANRFHEFRNGSCSCEDYW 635



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 157/307 (51%), Gaps = 7/307 (2%)

Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL 374
           I R  + DL  DAV+L   +    V+P+       L+ C +   +  G +IH  +V  G 
Sbjct: 33  IDRLERLDLR-DAVQL---LEDRSVSPSAEVLAWYLRRCGSEAAIAEGKRIHYHIVLCGF 88

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
            S  ++ N L+++Y KCG ++ +  +F  +P+RN  +W  M+  +   G    A+ +   
Sbjct: 89  KSSRYLCNLLVEMYGKCGSLQAAKSVFHITPRRNVFSWTIMVAAFAHNGHYMDALNLLEI 148

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGS 494
           M  E +    +T+  +L A A+L+ L+ G  +H       +  D+ VAN LI+MYAKC S
Sbjct: 149 MDLEGISPNSITFIELLGAVAALSWLDRGRALHRRIACCGFLADIFVANCLINMYAKCRS 208

Query: 495 ITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSA 554
           + DA  VF+ +   + ++W A+++ Y+++G   + LKVF LM   G  P  +TFV V+  
Sbjct: 209 LADACSVFESLTSRSVIAWTALVAAYALNGFFRDALKVFLLMTLDGVEPTEVTFVTVVDV 268

Query: 555 CSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVM 614
           C++  +   G      + A      C+ +  +++++ G+    D+A K+ + +  +  ++
Sbjct: 269 CADIAVFGIGREVHGVIDARSEANVCVGN--ALINMYGKCASPDEARKVFDAMQ-RKDII 325

Query: 615 IWRALLG 621
            W +++ 
Sbjct: 326 TWNSMIA 332



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 91/390 (23%), Positives = 164/390 (42%), Gaps = 26/390 (6%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L+ C     +     IH  ++  G     +  N+L+ +Y K   L  A  +F   P RN 
Sbjct: 64  LRRCGSEAAIAEGKRIHYHIVLCGFKSSRYLCNLLVEMYGKCGSLQAAKSVFHITPRRNV 123

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
            S+   +  +  +  +++A+ L   +  EG   N   F   L  + ++ W +    +   
Sbjct: 124 FSWTIMVAAFAHNGHYMDALNLLEIMDLEGISPNSITFIELLGAVAALSWLDRGRALHRR 183

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEA 226
           +   G  ++ FV   LI+ ++ C  +  A  VF+ L                 N  F +A
Sbjct: 184 IACCGFLADIFVANCLINMYAKCRSLADACSVFESLTSRSVIAWTALVAAYALNGFFRDA 243

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           L  F  M   G +P   TF  V+  C  +    + +  HG  +    E ++ V  AL+++
Sbjct: 244 LKVFLLMTLDGVEPTEVTFVTVVDVCADIAVFGIGREVHG-VIDARSEANVCVGNALINM 302

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF-----VAP 341
           Y K      AR++F+ M +KD+I W+ MIA Y Q      A+E++ RM+++      +  
Sbjct: 303 YGKCASPDEARKVFDAMQRKDIITWNSMIAVYGQNGYGFQALEIYKRMQESRMTILGITH 362

Query: 342 NQFTFVSVLQACATMEGL--DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
           +  TF+ VL AC +  GL  D      S++   G          L+D+  + G ++ + E
Sbjct: 363 DDITFIGVLFAC-SHAGLVKDSCKLYSSMIGDYGFKPTSLQCGCLIDLLGRAGWLDEAEE 421

Query: 400 LFAESPKR-NHVTWNTMIVGYVQLGEVGKA 428
                P   +H  W  ++   +   +V +A
Sbjct: 422 FINSMPYHPDHTIWTILLGACITHADVERA 451


>gi|302794420|ref|XP_002978974.1| hypothetical protein SELMODRAFT_109721 [Selaginella moellendorffii]
 gi|300153292|gb|EFJ19931.1| hypothetical protein SELMODRAFT_109721 [Selaginella moellendorffii]
          Length = 948

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 239/784 (30%), Positives = 388/784 (49%), Gaps = 41/784 (5%)

Query: 60  ATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM-- 117
           A ++++     DL      H  + + G  LD      L+ +Y     +  A + FD    
Sbjct: 168 AMAVEAAGMKRDLSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAFL 227

Query: 118 --PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAEL 175
             P  + +S+   +        ++ A+ LF  +  +G   +   F   L  ++ +G    
Sbjct: 228 RAPSSDVVSWTKILAACNEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQ 287

Query: 176 CPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN--------------- 220
              + + V     + ++ +GTA++  ++  G ++ A + FD +                 
Sbjct: 288 GKRIHSMVLDRELERDSMIGTAVVKMYARIGSIQDACRAFDRIDQPGVAAWTVLIGAYCR 347

Query: 221 -DCFEEALNFFSQMRAVGFKPNNFTFAFVLKAC--LGLDTIRVAKSAHGCALKTCYEMDL 277
              F   +    +M A G KPN  TF  +L  C  L L+  +  ++      +   +   
Sbjct: 348 LGSFNSVMQILERMEAEGVKPNEVTFITILDTCKNLALEDGKKIQALASEQQQRSLDASA 407

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
            +  A++ ++++   +  AR  F+++ +K V  ++ MIA YA      +A+ +F  M + 
Sbjct: 408 RIGTAVIGMFSRFSSMILAREAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRR 467

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            VA +       + ACA++  L+ G  +H   + +GL  D  V  AL+D+Y++CG ME++
Sbjct: 468 RVAADNLVLAVAISACASIPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDA 527

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
             +F E  + + + W+ MI    + G+   A+ M ++M ++    T  T   VL ACA  
Sbjct: 528 SAVFGEIERPDTIAWSAMIAALGRHGDPRGAVAMAARMQQDGWRPTGATMVGVLAACAHA 587

Query: 458 AALE-PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
             +E    +VH L V   +D D  V  A++ MYAK GSI +A   FD + + +  +W  M
Sbjct: 588 GMMEEAARKVHSLLVDGGFDSDPEVKFAVMRMYAKVGSIQEACNAFDKIENPDVKAWTTM 647

Query: 517 ISGYSMHG---LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA 573
           +  Y   G    S   LK+  +MQQ G  P+ +TFV +L+AC+ GG L++   YFK M  
Sbjct: 648 LEAYCRLGKYNASDRALKLARMMQQDGVMPDKVTFVDILTACAYGGHLQEAGRYFKDMKF 707

Query: 574 NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGR 633
           +YG+ P +EHY ++V  + R G+L +A  LI  +P Q + +IW ALL  C   N+    +
Sbjct: 708 DYGLVPEMEHYVALVDTVARKGYLQEAEDLIRMVPLQVNEIIWFALLECCKSQNDAPRTQ 767

Query: 634 LSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMV 682
              + I+     +     L +  + +A  WE+A             KEPG S I  +  V
Sbjct: 768 RVGEIIMKI---NNKLDPLGTGAHRVAARWEEAKRVRKLMTDRGIKKEPGKSMISIKNTV 824

Query: 683 HYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLA 742
           H F AGD SH     I   ++ +    +K GYIPD   VL DV ED+KER LW HSE+LA
Sbjct: 825 HGFVAGDRSHPHTREIYAEVDRITALIKKDGYIPDTRYVLHDVPEDKKERLLWYHSERLA 884

Query: 743 LAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHF-QDGCCSC 801
           +A+     PP  P+R+IKNLR+C DCHTA K+ +K++QREII+RD  RFHHF +DG CSC
Sbjct: 885 MAYGHMNTPPGQPLRVIKNLRVCGDCHTASKLYAKVMQREIIVRDNRRFHHFAKDGTCSC 944

Query: 802 GDFW 805
           GD+W
Sbjct: 945 GDYW 948



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 151/592 (25%), Positives = 270/592 (45%), Gaps = 25/592 (4%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
           F+  SY   LQ C +   +     +H  + +     + F  N L+ +Y       +A ++
Sbjct: 61  FDVDSYQHVLQLCTRLRAMAEGARVHDHIRRSRMEAERFVGNDLVFMYAAFGNPGEARRI 120

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           FD +   N +SF   ++ Y  +    EA+ +      +  + +P      ++        
Sbjct: 121 FDGLGSHNILSFTAIMRAYVTAGDPDEALKILHLARLKAFKADPPMLAMAVEAAGMKRDL 180

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF-------------- 219
            L       + + G+D +A V  +LI  +S CG +E A + FD  F              
Sbjct: 181 SLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAFLRAPSSDVVSWTKI 240

Query: 220 -NDCFEE-----ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY 273
              C E      AL+ F +MR  G  P+   F  VL + +GL  I   K  H   L    
Sbjct: 241 LAACNEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMVLDREL 300

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
           E D  +  A++ +Y + G I +A R F+ + +  V  W+ +I  Y +       +++  R
Sbjct: 301 ERDSMIGTAVVKMYARIGSIQDACRAFDRIDQPGVAAWTVLIGAYCRLGSFNSVMQILER 360

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV---RVGLLSDVFVSNALMDVYAK 390
           M    V PN+ TF+++L  C  +  L+ G +I +L     +  L +   +  A++ ++++
Sbjct: 361 MEAEGVKPNEVTFITILDTCKNL-ALEDGKKIQALASEQQQRSLDASARIGTAVIGMFSR 419

Query: 391 CGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
              M  + E F +  +++   +  MI GY    +  +A+ +F +M+  +V A  +  +  
Sbjct: 420 FSSMILAREAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADNLVLAVA 479

Query: 451 LRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE 510
           + ACAS+  LE G  +HC  +      D VV  AL+DMY++CGS+ DA  VF  +   + 
Sbjct: 480 ISACASIPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEIERPDT 539

Query: 511 VSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKS 570
           ++W+AMI+    HG     + +   MQQ GWRP   T VGVL+AC++ G++E+      S
Sbjct: 540 IAWSAMIAALGRHGDPRGAVAMAARMQQDGWRPTGATMVGVLAACAHAGMMEEAARKVHS 599

Query: 571 MVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           ++ + G +   E   +++ +  + G + +A    + I   P V  W  +L A
Sbjct: 600 LLVDGGFDSDPEVKFAVMRMYAKVGSIQEACNAFDKIE-NPDVKAWTTMLEA 650



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 126/488 (25%), Positives = 214/488 (43%), Gaps = 34/488 (6%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           + T L S I   D+     IH  VL +    D      ++ +Y ++  + DA + FD + 
Sbjct: 272 FVTVLDSVIGLGDIAQGKRIHSMVLDRELERDSMIGTAVVKMYARIGSIQDACRAFDRID 331

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW--AELC 176
           +    ++   I  Y     F   + +   +  EG + N   F   L    ++     +  
Sbjct: 332 QPGVAAWTVLIGAYCRLGSFNSVMQILERMEAEGVKPNEVTFITILDTCKNLALEDGKKI 391

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------N 220
             + +   +   D++A +GTA+I  FS    +  AR+ FD +                 N
Sbjct: 392 QALASEQQQRSLDASARIGTAVIGMFSRFSSMILAREAFDKISQKSVAAYTAMIAGYANN 451

Query: 221 DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
               EAL  F +M       +N   A  + AC  +  +   K+ H  A+      D  V 
Sbjct: 452 KQPREALAIFQEMIRRRVAADNLVLAVAISACASIPDLEEGKALHCSAMDLGLHRDDVVR 511

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
            AL+D+Y++ G + +A  +F E+ + D I WS MIA   +      AV +  RM+Q    
Sbjct: 512 TALVDMYSRCGSMEDASAVFGEIERPDTIAWSAMIAALGRHGDPRGAVAMAARMQQDGWR 571

Query: 341 PNQFTFVSVLQACA---TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
           P   T V VL ACA    ME  +   ++HSL+V  G  SD  V  A+M +YAK G ++ +
Sbjct: 572 PTGATMVGVLAACAHAGMME--EAARKVHSLLVDGGFDSDPEVKFAVMRMYAKVGSIQEA 629

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVG---KAMIMFSKMLEEQVPATEVTYSSVLRAC 454
              F +    +   W TM+  Y +LG+     +A+ +   M ++ V   +VT+  +L AC
Sbjct: 630 CNAFDKIENPDVKAWTTMLEAYCRLGKYNASDRALKLARMMQQDGVMPDKVTFVDILTAC 689

Query: 455 ASLAALEPGMQVHCLTVKANY----DMDVVVANALIDMYAKCGSITDARLVFDMMN-DWN 509
           A    L+   + +   +K +Y    +M+  V  AL+D  A+ G + +A  +  M+    N
Sbjct: 690 AYGGHLQEAGR-YFKDMKFDYGLVPEMEHYV--ALVDTVARKGYLQEAEDLIRMVPLQVN 746

Query: 510 EVSWNAMI 517
           E+ W A++
Sbjct: 747 EIIWFALL 754



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 95/210 (45%), Gaps = 5/210 (2%)

Query: 423 GEVGKAMIMFSKMLEEQVPATEV-TYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVV 481
           GE  + +  F ++++ +    +V +Y  VL+ C  L A+  G +VH    ++  + +  V
Sbjct: 41  GEEFRELQEFLRIIDARDEPFDVDSYQHVLQLCTRLRAMAEGARVHDHIRRSRMEAERFV 100

Query: 482 ANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW 541
            N L+ MYA  G+  +AR +FD +   N +S+ A++  Y   G   E LK+  L + + +
Sbjct: 101 GNDLVFMYAAFGNPGEARRIFDGLGSHNILSFTAIMRAYVTAGDPDEALKILHLARLKAF 160

Query: 542 RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAA 601
           + +       + A      L  G  +F   +   G +       S++ +    G ++ A 
Sbjct: 161 KADPPMLAMAVEAAGMKRDLSLGR-FFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAV 219

Query: 602 KLIEGIPFQ-PS--VMIWRALLGACIIHNN 628
           +  +    + PS  V+ W  +L AC  H +
Sbjct: 220 QAFDRAFLRAPSSDVVSWTKILAACNEHRD 249


>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 726

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 226/643 (35%), Positives = 339/643 (52%), Gaps = 46/643 (7%)

Query: 208 VEFARKVFDGLFNDCFEEALNF-FSQMRAV-GFKPNNFTFAFVLKACLGLDTIRVAKSAH 265
             F+ ++   L    F E   F +  +RA+  F  + F+F  +LKA   +         H
Sbjct: 85  THFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSAFNHGLEIH 144

Query: 266 GCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSI 325
           G A K  +  D ++   L+ +Y     I +AR +F++M   D + W+ +I  Y Q     
Sbjct: 145 GLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYD 204

Query: 326 DAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALM 385
           DA+ LF  MR + + P+     +VL AC     L  G  IH  V   G   D  +  AL+
Sbjct: 205 DALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALI 264

Query: 386 DVYAKCGRME-------------------------------NSVELFAESPKRNHVTWNT 414
           ++YA CG M+                               ++  +F +  +R+ V W+ 
Sbjct: 265 NMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSA 324

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
           MI GY +  +  +A+ +F +ML+++    ++T  SV+ AC+ + AL     +H    ++ 
Sbjct: 325 MISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSG 384

Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
           +   + V NALIDMYAKCG++  AR VF+ M   N +SW++MI+ ++MHG +   +K+F 
Sbjct: 385 FGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFR 444

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
            M++    PN +TF+GVL AC + GL+E+GE  F SM+  +GI P  EHY  MV L  RA
Sbjct: 445 RMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRA 504

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLS 654
             L KA +LIE +PF P+V+IW +L+ AC +H   E+G  +A+ +L+ EP+ +   V+LS
Sbjct: 505 NFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPDHDGALVVLS 564

Query: 655 NIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLE 703
           NIYA  + W            K  SKE   S IE    VH F   D  H   + I   L+
Sbjct: 565 NIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADRYHKQSDEIYEKLD 624

Query: 704 WLNMKSRKAGYIPDLSAVLRDV-REDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNL 762
            +  K +  GY P  S +L D+  ED+KE  LW HSEKLA+ + L      S IRI+KNL
Sbjct: 625 EVVSKLKLVGYKPSTSGILIDLEEEDKKELVLW-HSEKLAVCYGLISRRNESCIRIVKNL 683

Query: 763 RICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           RIC DCH+ +K++SK+ Q EI++RD  RFHH   G CSC D+W
Sbjct: 684 RICEDCHSFMKLVSKVYQIEIVVRDRTRFHHCSGGICSCRDYW 726



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 125/470 (26%), Positives = 216/470 (45%), Gaps = 66/470 (14%)

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVE-AVGLFSTLHR-EGHELNPFAFTAFLKVLVSM 170
           +F ++P  +T  F   +  +   S F E  + L+  L       L+ F+F + LK +  +
Sbjct: 76  VFSQIPNPHT-HFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKV 134

Query: 171 GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------- 219
                   +     KLG   + F+ T LI  ++ C  +  AR +FD +            
Sbjct: 135 SAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMII 194

Query: 220 -----NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAH------GCA 268
                N  +++AL  F  MR+   KP++     VL AC     +   ++ H      G A
Sbjct: 195 DGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYA 254

Query: 269 LKT------------CYEMD-------------LYVAVALLDLYTKSGEISNARRIFEEM 303
           + +            C  MD             L V+ A+L  Y K G + +AR IF++M
Sbjct: 255 IDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQM 314

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
            ++D++ WS MI+ YA++D   +A++LF  M Q    P+Q T +SV+ AC+ +  L   N
Sbjct: 315 IERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQAN 374

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
            IH+ V R G    + V+NAL+D+YAKCG +  + E+F   P++N ++W++MI  +   G
Sbjct: 375 WIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHG 434

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV-------HCLT-VKANY 475
               A+ +F +M E  +    VT+  VL AC     +E G ++       H ++  + +Y
Sbjct: 435 NADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHY 494

Query: 476 DMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHG 524
                    ++D+Y +   +  A  L+  M    N + W +++S   +HG
Sbjct: 495 -------GCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHG 537



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/430 (23%), Positives = 181/430 (42%), Gaps = 57/430 (13%)

Query: 49  FSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLP 108
           F++  F   S+ + L++  +       + IH    K G   D F    L+ +Y    R+ 
Sbjct: 117 FALDRF---SFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIM 173

Query: 109 DATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLV 168
           DA  LFD+M   + +++   I GY  +  + +A+ LF  +     + +       L    
Sbjct: 174 DARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACG 233

Query: 169 SMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------- 219
             G       +   V   G+  ++ + TALI+ ++ CG ++ ARK++DGL          
Sbjct: 234 HAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTA 293

Query: 220 --------------------------------------NDCFEEALNFFSQMRAVGFKPN 241
                                                 +D  +EAL  F +M      P+
Sbjct: 294 MLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPD 353

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
             T   V+ AC  +  +  A   H    ++ +   L V  AL+D+Y K G +  AR +FE
Sbjct: 354 QITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFE 413

Query: 302 EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL 361
            MP+K+VI WS MI  +A    +  A++LF RM++  + PN  TF+ VL AC     ++ 
Sbjct: 414 NMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEE 473

Query: 362 GNQI-HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTM---- 415
           G ++  S++   G+         ++D+Y +   +  ++EL    P   N + W ++    
Sbjct: 474 GEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSAC 533

Query: 416 -IVGYVQLGE 424
            + G  +LGE
Sbjct: 534 QVHGEAELGE 543



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/315 (21%), Positives = 126/315 (40%), Gaps = 52/315 (16%)

Query: 39  CSNSTTTPITFSVSEF---NSHSYATSLQSCIQNDDLQ-TAMTIHCQVLKKGNCLDLFAT 94
           C ++       ++ EF   N ++  + LQ+ + N      AM +  ++    +   L  +
Sbjct: 232 CGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVS 291

Query: 95  NVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHE 154
             +L+ Y KL  + DA  +FD+M ER+ + +   I GY  S Q  EA+ LF  + ++   
Sbjct: 292 TAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSV 351

Query: 155 LNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKV 214
            +     + +     +G       +   V + G      V  ALID ++ CG +  AR+V
Sbjct: 352 PDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREV 411

Query: 215 FDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKAC------ 252
           F+ +                 +   + A+  F +M+ V  +PN  TF  VL AC      
Sbjct: 412 FENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLV 471

Query: 253 ----------LGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEE 302
                     +    I   +  +GC               ++DLY ++  +  A  + E 
Sbjct: 472 EEGEKLFSSMINEHGISPTREHYGC---------------MVDLYCRANFLRKAIELIET 516

Query: 303 MP-KKDVIPWSFMIA 316
           MP   +VI W  +++
Sbjct: 517 MPFAPNVIIWGSLMS 531


>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
 gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 592

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 215/531 (40%), Positives = 319/531 (60%), Gaps = 12/531 (2%)

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y  +  IS  RR+F  +PK D   +  +I   ++     +++  + RM  A ++ + +TF
Sbjct: 62  YAAASPISYTRRLFFSIPKPDTFLFHSLITLTSKFSFPQESLLCYRRMLLANISSSNYTF 121

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
            +V+++ A +    +G  IH  V   G   D +V  AL+  YAK G +  + ++F + P+
Sbjct: 122 SAVIKSSADLTAFSIGETIHCHVYICGYGLDAYVQAALVSFYAKSGHVMIARKVFDKMPE 181

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
           +  V WN+MI GY Q G   +A+ +F  M +  V     T+ S+L ACA + A+  G  V
Sbjct: 182 KTVVAWNSMISGYEQNGFGKEAVELFFLMQDLGVKPDSSTFVSLLSACAQVGAIGLGFWV 241

Query: 467 HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLS 526
           H    +  +D++VV+  AL++MY++CG+++ AR VFD M + N V+W AMISGY MHG  
Sbjct: 242 HEYIARNCFDLNVVLGTALMNMYSRCGNVSKAREVFDSMEEKNIVAWTAMISGYGMHGHG 301

Query: 527 AEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTS 586
           ++ +++F+ M   G RPNN+TFV VLSAC++ GL+++G   F +M   YG+ P +EH   
Sbjct: 302 SQAIELFNEMSFDGPRPNNVTFVAVLSACAHAGLVDEGRQIFTTMKQEYGLVPSVEHQVC 361

Query: 587 MVSLLGRAGHLDKAAKLIEGI-PFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPE 645
           MV +LGRAGHL++A + I+   P +P+  +W A+LGAC +H N ++G   A+H+L  EPE
Sbjct: 362 MVDMLGRAGHLNEAYQFIKNTSPKEPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSIEPE 421

Query: 646 DEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHAD 694
           +   +V+LSNIYA+A   ++              KE G S I+    V+ F  GD SH  
Sbjct: 422 NPGHYVMLSNIYALAGRMDRVEKIRNIMIRNRLKKEVGYSTIDVDHKVYLFSMGDKSHPK 481

Query: 695 MNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSS 754
            N I   L+ L  + R+AGYIP   +V+ +V E+E+E  L  HSEKLA+AF L K     
Sbjct: 482 TNQIYLYLDELMSRCREAGYIPASESVMHEVEEEEREYALRYHSEKLAIAFGLLKTGSGV 541

Query: 755 PIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            IRI+KNLR+C DCHTAIK IS I  REI +RD  RFHHF+DG CSC D+W
Sbjct: 542 AIRIVKNLRMCEDCHTAIKYISIIANREINVRDRLRFHHFKDGSCSCQDYW 592



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/317 (31%), Positives = 164/317 (51%), Gaps = 14/317 (4%)

Query: 224 EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC-YEMDLYVAVA 282
           +E+L  + +M       +N+TF+ V+K+   L    + ++ H C +  C Y +D YV  A
Sbjct: 100 QESLLCYRRMLLANISSSNYTFSAVIKSSADLTAFSIGETIH-CHVYICGYGLDAYVQAA 158

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+  Y KSG +  AR++F++MP+K V+ W+ MI+ Y Q     +AVELF  M+   V P+
Sbjct: 159 LVSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQDLGVKPD 218

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
             TFVS+L ACA +  + LG  +H  + R     +V +  ALM++Y++CG +  + E+F 
Sbjct: 219 SSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVVLGTALMNMYSRCGNVSKAREVFD 278

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
              ++N V W  MI GY   G   +A+ +F++M  +      VT+ +VL ACA    ++ 
Sbjct: 279 SMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPRPNNVTFVAVLSACAHAGLVDE 338

Query: 463 GMQVHCLTVKANYDMDVVVANA--LIDMYAKCGSITDARLVFDMMNDWNEVS--WNAMIS 518
           G Q+   T+K  Y +   V +   ++DM  + G + +A       +        W AM+ 
Sbjct: 339 GRQIFT-TMKQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIKNTSPKEPAPAVWTAMLG 397

Query: 519 GYSMHGLSAEVLKVFDL 535
              MH       K FDL
Sbjct: 398 ACKMH-------KNFDL 407



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 141/267 (52%), Gaps = 3/267 (1%)

Query: 363 NQIHSLVVRVGL-LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQ 421
            QIH+ ++  GL  +   ++  L   YA    +  +  LF   PK +   ++++I    +
Sbjct: 36  QQIHARIIITGLGRTRSLITKLLSFAYAAASPISYTRRLFFSIPKPDTFLFHSLITLTSK 95

Query: 422 LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVV 481
                ++++ + +ML   + ++  T+S+V+++ A L A   G  +HC      Y +D  V
Sbjct: 96  FSFPQESLLCYRRMLLANISSSNYTFSAVIKSSADLTAFSIGETIHCHVYICGYGLDAYV 155

Query: 482 ANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW 541
             AL+  YAK G +  AR VFD M +   V+WN+MISGY  +G   E +++F LMQ  G 
Sbjct: 156 QAALVSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQDLGV 215

Query: 542 RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAA 601
           +P++ TFV +LSAC+  G +  G  +    +A    +  +   T+++++  R G++ KA 
Sbjct: 216 KPDSSTFVSLLSACAQVGAIGLG-FWVHEYIARNCFDLNVVLGTALMNMYSRCGNVSKAR 274

Query: 602 KLIEGIPFQPSVMIWRALLGACIIHNN 628
           ++ + +  + +++ W A++    +H +
Sbjct: 275 EVFDSME-EKNIVAWTAMISGYGMHGH 300



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 86/360 (23%), Positives = 155/360 (43%), Gaps = 38/360 (10%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           ++++++  ++S           TIHC V   G  LD +    L++ Y K   +  A K+F
Sbjct: 117 SNYTFSAVIKSSADLTAFSIGETIHCHVYICGYGLDAYVQAALVSFYAKSGHVMIARKVF 176

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D+MPE+  +++ + I GY  +    EAV LF  +   G + +   F + L     +G   
Sbjct: 177 DKMPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQDLGVKPDSSTFVSLLSACAQVGAIG 236

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------- 218
           L   V   + +   D N  +GTAL++ +S CG V  AR+VFD +                
Sbjct: 237 LGFWVHEYIARNCFDLNVVLGTALMNMYSRCGNVSKAREVFDSMEEKNIVAWTAMISGYG 296

Query: 219 FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL-------GLDTIRVAKSAHGCALKT 271
            +    +A+  F++M   G +PNN TF  VL AC        G       K  +G     
Sbjct: 297 MHGHGSQAIELFNEMSFDGPRPNNVTFVAVLSACAHAGLVDEGRQIFTTMKQEYGLVPSV 356

Query: 272 CYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIP--WSFMIAR---YAQTDLSID 326
            ++      V ++D+  ++G ++ A +  +    K+  P  W+ M+     +   DL ++
Sbjct: 357 EHQ------VCMVDMLGRAGHLNEAYQFIKNTSPKEPAPAVWTAMLGACKMHKNFDLGVE 410

Query: 327 AVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMD 386
             E    +      P  +  +S + A A    +D   +I ++++R  L  +V  S   +D
Sbjct: 411 VAEHLLSIEPE--NPGHYVMLSNIYALAGR--MDRVEKIRNIMIRNRLKKEVGYSTIDVD 466


>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
 gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
          Length = 706

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 248/724 (34%), Positives = 373/724 (51%), Gaps = 82/724 (11%)

Query: 95  NVLLNVYVKLNRLPDAT-KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGH 153
           N LL  Y + NRLPDA   LF  MP R+  S+   I G ++  Q +              
Sbjct: 52  NALLAGYFR-NRLPDAALGLFRRMPSRDLASYNALISGLSLRRQTL-------------- 96

Query: 154 ELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARK 213
              P A  A   +          P V +              T+L+  +           
Sbjct: 97  ---PDAAAALASI-------PFPPSVVSF-------------TSLLRGY----------- 122

Query: 214 VFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY 273
           V  GL  D    A+  F QM     + N+ ++  +L   L    +  A+           
Sbjct: 123 VRHGLLAD----AIRLFQQMP----ERNHVSYTVLLGGLLDAGRVNEARRL----FDEMP 170

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
           + D+    A+L  Y ++G I+ AR +F+EMPK++V+ W+ MI+ YAQ      A +LF  
Sbjct: 171 DRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEV 230

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           M +          V  +QA    +  +L N +            V   NA+M  + + G 
Sbjct: 231 MPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPE--------HPVAACNAMMVGFGQRGM 282

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           ++ +  +F +  +R+  TW+ MI  Y Q   + +A+  F +ML   V     +  S+L  
Sbjct: 283 VDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTV 342

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
           CA+LA L+ G +VH   ++ ++DMDV   +ALI MY KCG++  A+ VF      + V W
Sbjct: 343 CAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMW 402

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA 573
           N+MI+GY+ HGL  + L +F  M+  G  P+ +T++G L+ACS  G +++G   F SM  
Sbjct: 403 NSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTV 462

Query: 574 NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGR 633
           N  I P  EHY+ MV LLGR+G +++A  LI+ +P +P  +IW AL+GAC +H N EI  
Sbjct: 463 NSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAE 522

Query: 634 LSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMV 682
            +A+ +L+ EP +   +VLLS+IY     WE A+           +K PG SWIE    V
Sbjct: 523 FAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRV 582

Query: 683 HYFRAGDT-SHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKL 741
           H F +GD  +H +   I  +LE L+    ++GY  D S VL D+ E++K   L  HSE+ 
Sbjct: 583 HLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQ 642

Query: 742 ALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSC 801
           A+A+ L K+P   PIR++KNLR+C DCH+AIK+I+KI  REII+RD +RFHHF+DG CSC
Sbjct: 643 AVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIILRDANRFHHFKDGFCSC 702

Query: 802 GDFW 805
            D+W
Sbjct: 703 RDYW 706



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 163/345 (47%), Gaps = 26/345 (7%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D+ A   +L+ Y +  R+ +A  LFDEMP+RN +S+   I GY  + +   A  LF  + 
Sbjct: 173 DVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMP 232

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
               E N  ++TA L   +  G  E    +F  + +  H   A    A++  F   G V+
Sbjct: 233 ----ERNEVSWTAMLVGYIQAGHVEDAAELFNAMPE--HPVAAC--NAMMVGFGQRGMVD 284

Query: 210 FARKVF-------DGLF---------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL 253
            A+ VF       DG +         N+   EAL+ F +M   G +PN  +   +L  C 
Sbjct: 285 AAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCA 344

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSF 313
            L  +   +  H   L+  ++MD++   AL+ +Y K G +  A+R+F     KD++ W+ 
Sbjct: 345 ALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNS 404

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI-HSLVVRV 372
           MI  YAQ  L   A+ +F  MR A ++P+  T++  L AC+    +  G +I +S+ V  
Sbjct: 405 MITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNS 464

Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMI 416
            +       + ++D+  + G +E + +L    P + + V W  ++
Sbjct: 465 SIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALM 509



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 136/322 (42%), Gaps = 62/322 (19%)

Query: 288 TKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFV 347
            ++G I  AR  FE MP +    ++ ++A Y +  L   A+ LF RM    +A       
Sbjct: 28  ARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYN---- 83

Query: 348 SVLQACATMEGLDLGNQI----HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
                 A + GL L  Q      + +  +     V    +L+  Y + G + +++ LF +
Sbjct: 84  ------ALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQ 137

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
            P+RNHV++  ++ G +  G V +A  +F +M                            
Sbjct: 138 MPERNHVSYTVLLGGLLDAGRVNEARRLFDEMP--------------------------- 170

Query: 464 MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMH 523
                       D DVV   A++  Y + G IT+AR +FD M   N VSW AMISGY+ +
Sbjct: 171 ------------DRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQN 218

Query: 524 GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEH 583
           G      K+F++M +R    N +++  +L      G +E     F +M   + +  C   
Sbjct: 219 GEVNLARKLFEVMPER----NEVSWTAMLVGYIQAGHVEDAAELFNAM-PEHPVAAC--- 270

Query: 584 YTSMVSLLGRAGHLDKAAKLIE 605
             +M+   G+ G +D A  + E
Sbjct: 271 -NAMMVGFGQRGMVDAAKTVFE 291



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 110/259 (42%), Gaps = 42/259 (16%)

Query: 382 NALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKM------ 435
           NA +   A+ G +E +   F   P R   ++N ++ GY +      A+ +F +M      
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80

Query: 436 ----------LEEQV-------------PATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
                     L  Q              P + V+++S+LR       L   +++     +
Sbjct: 81  SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
            N+    V+   L+D     G + +AR +FD M D + V+W AM+SGY   G   E   +
Sbjct: 141 RNHVSYTVLLGGLLD----AGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARAL 196

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
           FD M +R    N +++  ++S  +  G +      F+ M     +      +T+M+    
Sbjct: 197 FDEMPKR----NVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVS-----WTAMLVGYI 247

Query: 593 RAGHLDKAAKLIEGIPFQP 611
           +AGH++ AA+L   +P  P
Sbjct: 248 QAGHVEDAAELFNAMPEHP 266



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 14/166 (8%)

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
           NA I   A+ G+I  AR  F+ M      S+NA+++GY  + L    L +F  M  R   
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
             N    G+        L  Q      + +A+    P +  +TS++    R G L  A +
Sbjct: 81  SYNALISGL-------SLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIR 133

Query: 603 LIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS-AQHILDFEPEDE 647
           L + +P +  V  +  LLG  +     + GR++ A+ + D  P+ +
Sbjct: 134 LFQQMPERNHVS-YTVLLGGLL-----DAGRVNEARRLFDEMPDRD 173



 Score = 39.7 bits (91), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 23/98 (23%), Positives = 44/98 (44%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  S  + L  C     L     +H  +L+    +D+FA + L+ +Y+K   L  A ++F
Sbjct: 332 NYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVF 391

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREG 152
                ++ + + + I GY       +A+G+F  +   G
Sbjct: 392 HTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAG 429


>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
           [Vitis vinifera]
          Length = 684

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 230/712 (32%), Positives = 369/712 (51%), Gaps = 104/712 (14%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           NS  +A  L SC+++   +    +H ++L     +++F  N L++VY K + L DA KLF
Sbjct: 14  NSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLF 73

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D MP+RNT                                   F + + + VL   G+ +
Sbjct: 74  DRMPQRNT-----------------------------------FTWNSLISVLTKSGFLD 98

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMR 234
               +F  +     + +     +++  F+                +D FEE+L +F +M 
Sbjct: 99  EAARLFGSM----PEPDQCSWNSMVSGFAQ---------------HDRFEESLEYFVKMH 139

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
              F  N ++F   L AC GL  + +    H    K+ Y  D+Y+  AL+D+Y+K G ++
Sbjct: 140 REDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVA 199

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
            A  +F  M +++++ W+ +I  Y Q   + +A+E+F RM  + + P++ T  SV+ ACA
Sbjct: 200 CAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACA 259

Query: 355 TMEGLDLGNQIHSLVVRVG-LLSDVFVSNALMDVYAKCGRMENSVE-------------- 399
           ++  L  G QIH+ VV+      D+ + NAL+D+YAKC ++  +                
Sbjct: 260 SLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSET 319

Query: 400 -----------------LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPA 442
                            +F++  +RN V+WN +I GY Q GE  +A+ +F  +  E +  
Sbjct: 320 SMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWP 379

Query: 443 TEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM------DVVVANALIDMYAKCGSIT 496
           T  T+ ++L ACA+LA L  G Q H   +K  ++       D+ V N+LIDMY KCGSI 
Sbjct: 380 THYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIE 439

Query: 497 DARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS 556
           D   VF+ M + + VSWNA+I GY+ +G  AE L++F  M   G +P+++T +GVL ACS
Sbjct: 440 DGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACS 499

Query: 557 NGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIW 616
           + GL+E+G  YF SM   +G+ P  +HYT MV LLGRAG L++A  LIE +P  P  ++W
Sbjct: 500 HAGLVEEGRHYFFSM-EEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVW 558

Query: 617 RALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EK 665
            +LL AC +H N+E+G+ +A+ +L+ +P +   +VLLSN+YA    W           ++
Sbjct: 559 GSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQ 618

Query: 666 AASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPD 717
             +K+PG SWIE +  VH F   D SH     I  +L+ L  + ++ GYIPD
Sbjct: 619 GVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRVGYIPD 670



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 126/255 (49%), Gaps = 31/255 (12%)

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           PN   F  +L +C           +H+ ++      ++F+ N L+DVY KC  ++++ +L
Sbjct: 13  PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72

Query: 401 FAESPKRNHVT-------------------------------WNTMIVGYVQLGEVGKAM 429
           F   P+RN  T                               WN+M+ G+ Q     +++
Sbjct: 73  FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESL 132

Query: 430 IMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMY 489
             F KM  E     E ++ S L ACA L  L  G QVH L  K+ Y  DV + +ALIDMY
Sbjct: 133 EYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMY 192

Query: 490 AKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFV 549
           +KCGS+  A  VF  M + N V+WN++I+ Y  +G ++E L+VF  M   G  P+ +T  
Sbjct: 193 SKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLA 252

Query: 550 GVLSACSNGGLLEQG 564
            V+SAC++   L++G
Sbjct: 253 SVVSACASLCALKEG 267


>gi|302786698|ref|XP_002975120.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
 gi|300157279|gb|EFJ23905.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
          Length = 485

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 191/480 (39%), Positives = 292/480 (60%), Gaps = 13/480 (2%)

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           V  N+ T+V+VL    T   L+ G ++HS V   GL  DV V  AL+++Y KC  +E + 
Sbjct: 6   VERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQSVEEAR 65

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKM--LEEQVPATEVTYSSVLRACAS 456
             F +  + N V+W+ M+  Y Q G    A+ ++ +M    + +    VT+ ++L AC+ 
Sbjct: 66  AAFEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLLDACSF 125

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           L AL  G ++H    +  +D D+VV NAL++ Y +CGS+ DA++VFD M   + +SW++M
Sbjct: 126 LGALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISWSSM 185

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           IS ++  G   E ++++  M   G  P+++ F+ VL ACSN G++E    +F+S+V +  
Sbjct: 186 ISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQ 245

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
           +EP +EHY  MV +LGRAG L  A  L+  +PF P  +++  +L AC ++ +VE G  +A
Sbjct: 246 VEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAAA 305

Query: 637 QHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYF 685
           + + + +PE+ + ++ L+NIY+ A+  + AA            K+PG SWIE    VH F
Sbjct: 306 EVVFELDPENSSPYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHEF 365

Query: 686 RAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAF 745
            AGD  H   + I   ++ L  + ++AGY  D   VL+DV EDEKE  LW HSEKLA+AF
Sbjct: 366 IAGDKMHPQRDEIYAEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIAF 425

Query: 746 ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            L   PP +P+RI+KNLR+C DCH A K+ISK+  REI++RD +RFHHF DG CSC D+W
Sbjct: 426 GLISTPPGAPLRIVKNLRVCSDCHAATKVISKVTGREILVRDTNRFHHFLDGMCSCNDYW 485



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 160/337 (47%), Gaps = 37/337 (10%)

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           M   G + N  T+  VL       ++   +  H        E+D+ V  AL+++Y K   
Sbjct: 1   MEIRGVERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQS 60

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF--VAPNQFTFVSVL 350
           +  AR  FE++ + +V+ WS M+A YAQ   +  A+EL+  M  A   +APN+ TF+++L
Sbjct: 61  VEEARAAFEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLL 120

Query: 351 QACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHV 410
            AC+ +  L  G +IH+ V   G  +D+ V NAL++ Y +CG + ++  +F    +R+ +
Sbjct: 121 DACSFLGALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVI 180

Query: 411 TWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE-PGMQVHCL 469
           +W++MI  + Q G V +AM ++ +ML E     ++ + SVL AC++   +E  G     +
Sbjct: 181 SWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSI 240

Query: 470 TVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEV 529
                 +  +     ++D+  + G + DA                               
Sbjct: 241 VGDTQVEPTLEHYACMVDVLGRAGKLRDAE------------------------------ 270

Query: 530 LKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEA 566
               DL++   + P  L ++ +LSAC     +E+GEA
Sbjct: 271 ----DLLRLMPFHPGPLLYMTMLSACKLYTDVERGEA 303



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 124/273 (45%), Gaps = 19/273 (6%)

Query: 152 GHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFA 211
           G E N   +   L    + G  E    V + V   G + +  VGTAL++ +  C  VE A
Sbjct: 5   GVERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQSVEEA 64

Query: 212 RKVFDGLF----------------NDCFEEALNFFSQMRAV--GFKPNNFTFAFVLKACL 253
           R  F+ +                 N     AL  + +M +   G  PN  TF  +L AC 
Sbjct: 65  RAAFEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLLDACS 124

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSF 313
            L  +   +  H    +  ++ DL V  AL++ Y + G + +A+ +F+ M ++DVI WS 
Sbjct: 125 FLGALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISWSS 184

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL-GNQIHSLVVRV 372
           MI+ +AQ     +A+EL+ RM      P+   F+SVL AC+    ++  G+   S+V   
Sbjct: 185 MISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDT 244

Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
            +   +     ++DV  + G++ ++ +L    P
Sbjct: 245 QVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMP 277



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 61/274 (22%), Positives = 112/274 (40%), Gaps = 25/274 (9%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N  +Y T L        L+    +H +V   G  +D+     L+N+Y K   + +A  
Sbjct: 7   ERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQSVEEARA 66

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH--REGHELNPFAFTAFLKVLVSM 170
            F+++   N +S+   +  Y  +     A+ L+  +   R+G   N   F   L     +
Sbjct: 67  AFEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLLDACSFL 126

Query: 171 GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------- 219
           G       + A V + G D++  V  AL++ +  CG +  A+ VFDG+            
Sbjct: 127 GALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISWSSMI 186

Query: 220 -----NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVA----KSAHGCALK 270
                    +EA+  + +M + G  P++  F  VL AC     +  +    +S  G    
Sbjct: 187 SAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVG---D 243

Query: 271 TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
           T  E  L     ++D+  ++G++ +A  +   MP
Sbjct: 244 TQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMP 277



 Score = 45.8 bits (107), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 2/87 (2%)

Query: 536 MQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAG 595
           M+ RG   N +T+V VLS  +  G LE+G     S VA  G+E  +   T++V++ G+  
Sbjct: 1   MEIRGVERNKVTYVTVLSGFTTPGSLEEGR-RVHSRVAGAGLEVDVIVGTALVNMYGKCQ 59

Query: 596 HLDKAAKLIEGIPFQPSVMIWRALLGA 622
            +++A    E I  +P+V+ W A+L A
Sbjct: 60  SVEEARAAFEKIS-RPNVVSWSAMLAA 85


>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
          Length = 843

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 241/757 (31%), Positives = 380/757 (50%), Gaps = 87/757 (11%)

Query: 51  VSEFNSHSYATS--LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLP 108
           ++EF    + T+  +Q  I+  DL+ A  +   + ++    D  + N +L  Y     + 
Sbjct: 70  LTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQR----DTVSWNAMLFGYAGRGDIG 125

Query: 109 DATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLV 168
            A KLFD MPER+ +S+ + I GY  +    + + +F  + R G   +   F   LK   
Sbjct: 126 VAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCS 185

Query: 169 SMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------- 218
           S+        +     K+G D +   G+AL+D ++ C  ++ + + F  +          
Sbjct: 186 SLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSA 245

Query: 219 ------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC 272
                  ND     L  F +M+  G   +  TFA V ++C GL  +R+    HG ALKT 
Sbjct: 246 IIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTD 305

Query: 273 YEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTD--LSIDAVEL 330
           +  D+ +  A LD+Y K   +S+A+++F  +P  ++  ++ +I  YA++D  L +D V L
Sbjct: 306 FGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGLGLDEVSL 365

Query: 331 FCRMRQAFVAPNQFTFVSV-----------------------------LQACATMEGL-- 359
               R   V       + V                             ++AC   E +  
Sbjct: 366 SGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVS 425

Query: 360 --------------DLGNQ-------IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
                           GN+       IH+ +++  L  D FV  AL+D+Y+KCG ME + 
Sbjct: 426 RDAVSWNAIIAAHEQNGNEEKTLSLFIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAE 485

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
           +L     ++  V+WN +I G+    +  +A   FSKMLE  V     TY+++L  CA+L 
Sbjct: 486 KLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLV 545

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
            +E G Q+H   +K     D  +++ L+DMY+KCG++ D +L+F+   + + V+WNAM+ 
Sbjct: 546 TVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVC 605

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           GY+ HGL  E LK+F+ MQ    +PN+ TF+ VL AC + GL+E+G  YF SM++NYG++
Sbjct: 606 GYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLD 665

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P +EHY+ +V ++GR+G + KA +LIEG+PF+   +IWR LL  C IH NVE+   +A  
Sbjct: 666 PQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYS 725

Query: 639 ILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRA 687
           IL  EPED A +VLLSNIYA A  W +              KEPG SWIE +  VH F  
Sbjct: 726 ILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLV 785

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRD 724
           GD +H     I   L+ L  + +  GY+PD   +L D
Sbjct: 786 GDKAHPRSKEIYENLDVLTDEMKWVGYMPDTDFILND 822



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 222/441 (50%), Gaps = 27/441 (6%)

Query: 196 TALIDAFSVCGCVEFARKVFDGLFNDCFEE-----ALNFFSQMRAVGFKPNNFTFAFVLK 250
           T  I  FS        +K F  +F +C +           ++M    FKP  F    +++
Sbjct: 26  TLPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQ 85

Query: 251 ACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIP 310
             +    +  A            + D     A+L  Y   G+I  A+++F+ MP++DV+ 
Sbjct: 86  MYIKCSDLEFAFKV----FDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVS 141

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV 370
           W+ +I+ Y         +++F +M +     ++ TF  VL++C+++E    G QIH L V
Sbjct: 142 WNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAV 201

Query: 371 RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMI 430
           ++G   DV   +AL+D+YAKC +++ S++ F   P++N V+W+ +I G VQ  ++   + 
Sbjct: 202 KMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLE 261

Query: 431 MFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYA 490
           +F +M +  V  ++ T++SV R+CA L+AL  G Q+H   +K ++  DVV+  A +DMY 
Sbjct: 262 LFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYM 321

Query: 491 KCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVG 550
           KC +++DA+ +F+ + + N  S+NA+I GY+                 +G   + ++  G
Sbjct: 322 KCNNLSDAQKLFNSLPNHNLQSYNAIIVGYA--------------RSDKGLGLDEVSLSG 367

Query: 551 VLSACSN-GGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF 609
              AC+   G LE  + +  SM +      C+ +  +++ + G+ G L +A  + E +  
Sbjct: 368 AFRACAVIKGDLEGLQVHGLSMKSLCQSNICVAN--AILDMYGKCGALVEACLVFEEMVS 425

Query: 610 QPSVMIWRALLGACIIHNNVE 630
           + +V  W A++ A   + N E
Sbjct: 426 RDAVS-WNAIIAAHEQNGNEE 445


>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
          Length = 798

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 247/724 (34%), Positives = 374/724 (51%), Gaps = 82/724 (11%)

Query: 95  NVLLNVYVKLNRLPDAT-KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGH 153
           N LL  Y + NRLPDA   LF  MP R+  S+   I G ++  Q +              
Sbjct: 52  NALLAGYFR-NRLPDAALGLFRRMPSRDLASYNALISGLSLRRQTL-------------- 96

Query: 154 ELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARK 213
              P A  A   +          P V +              T+L+  +           
Sbjct: 97  ---PDAAAALASI-------PFPPSVVSF-------------TSLLRGY----------- 122

Query: 214 VFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY 273
           V  GL  D    A+  F QM     + N+ ++  +L   L    +  A+           
Sbjct: 123 VRHGLLAD----AIRLFQQMP----ERNHVSYTVLLGGLLDAGRVNEARRL----FDEMP 170

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
           + D+    A+L  Y ++G I+ AR +F+EMPK++V+ W+ MI+ YAQ      A +LF  
Sbjct: 171 DRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEV 230

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           M +          V  +QA    +  +L N +            V   NA+M  + + G 
Sbjct: 231 MPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPE--------HPVAACNAMMVGFGQRGM 282

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           ++ +  +F +  +R+  TW+ MI  Y Q   + +A+  F +ML   V     +  S+L  
Sbjct: 283 VDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTV 342

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
           CA+LA L+ G +VH   ++ ++DMDV   +ALI MY KCG++  A+ VF      + V W
Sbjct: 343 CAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMW 402

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA 573
           N+MI+GY+ HGL  + L +F  M+  G  P+ +T++G L+ACS  G +++G   F SM  
Sbjct: 403 NSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTV 462

Query: 574 NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGR 633
           N  I P  EHY+ MV LLGR+G +++A  LI+ +P +P  +IW AL+GAC +H N EI  
Sbjct: 463 NSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAE 522

Query: 634 LSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMV 682
           ++A+ +L+ EP +   +VLLS+IY     WE A+           +K PG SWIE    V
Sbjct: 523 VAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRV 582

Query: 683 HYFRAGDT-SHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKL 741
           H F +GD  +H +   I  +LE L+    ++GY  D S VL D+ E++K   L  HSE+ 
Sbjct: 583 HLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQ 642

Query: 742 ALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSC 801
           A+A+ L K+P   PIR++KNLR+C DCH+AIK+I+KI  REI++RD +RFHHF+DG CSC
Sbjct: 643 AVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIVLRDANRFHHFKDGFCSC 702

Query: 802 GDFW 805
            D+W
Sbjct: 703 RDYW 706



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/376 (26%), Positives = 174/376 (46%), Gaps = 27/376 (7%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D+ A   +L+ Y +  R+ +A  LFDEMP+RN +S+   I GY  + +   A  LF  + 
Sbjct: 173 DVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMP 232

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
               E N  ++TA L   +  G  E    +F  + +  H   A    A++  F   G V+
Sbjct: 233 ----ERNEVSWTAMLVGYIQAGHVEDAAELFNAMPE--HPVAAC--NAMMVGFGQRGMVD 284

Query: 210 FARKVF-------DGLF---------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL 253
            A+ VF       DG +         N+   EAL+ F +M   G +PN  +   +L  C 
Sbjct: 285 AAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCA 344

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSF 313
            L  +   +  H   L+  ++MD++   AL+ +Y K G +  A+R+F     KD++ W+ 
Sbjct: 345 ALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNS 404

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI-HSLVVRV 372
           MI  YAQ  L   A+ +F  MR A ++P+  T++  L AC+    +  G +I +S+ V  
Sbjct: 405 MITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNS 464

Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMIVGYVQLGEVGKAMIM 431
            +       + ++D+  + G +E + +L    P + + V W  ++ G  ++    +   +
Sbjct: 465 SIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALM-GACRMHRNAEIAEV 523

Query: 432 FSKMLEEQVPATEVTY 447
            +K L E  P     Y
Sbjct: 524 AAKKLLELEPGNAGPY 539



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 136/322 (42%), Gaps = 62/322 (19%)

Query: 288 TKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFV 347
            ++G I  AR  FE MP +    ++ ++A Y +  L   A+ LF RM    +A       
Sbjct: 28  ARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYN---- 83

Query: 348 SVLQACATMEGLDLGNQI----HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
                 A + GL L  Q      + +  +     V    +L+  Y + G + +++ LF +
Sbjct: 84  ------ALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQ 137

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
            P+RNHV++  ++ G +  G V +A  +F +M                            
Sbjct: 138 MPERNHVSYTVLLGGLLDAGRVNEARRLFDEM---------------------------- 169

Query: 464 MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMH 523
                       D DVV   A++  Y + G IT+AR +FD M   N VSW AMISGY+ +
Sbjct: 170 -----------PDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQN 218

Query: 524 GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEH 583
           G      K+F++M +R    N +++  +L      G +E     F +M   + +  C   
Sbjct: 219 GEVNLARKLFEVMPER----NEVSWTAMLVGYIQAGHVEDAAELFNAM-PEHPVAAC--- 270

Query: 584 YTSMVSLLGRAGHLDKAAKLIE 605
             +M+   G+ G +D A  + E
Sbjct: 271 -NAMMVGFGQRGMVDAAKTVFE 291



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 110/259 (42%), Gaps = 42/259 (16%)

Query: 382 NALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKM------ 435
           NA +   A+ G +E +   F   P R   ++N ++ GY +      A+ +F +M      
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80

Query: 436 ----------LEEQV-------------PATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
                     L  Q              P + V+++S+LR       L   +++     +
Sbjct: 81  SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
            N+    V+   L+D     G + +AR +FD M D + V+W AM+SGY   G   E   +
Sbjct: 141 RNHVSYTVLLGGLLD----AGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARAL 196

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
           FD M +R    N +++  ++S  +  G +      F+ M     +      +T+M+    
Sbjct: 197 FDEMPKR----NVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVS-----WTAMLVGYI 247

Query: 593 RAGHLDKAAKLIEGIPFQP 611
           +AGH++ AA+L   +P  P
Sbjct: 248 QAGHVEDAAELFNAMPEHP 266



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 14/166 (8%)

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
           NA I   A+ G+I  AR  F+ M      S+NA+++GY  + L    L +F  M  R   
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
             N    G+        L  Q      + +A+    P +  +TS++    R G L  A +
Sbjct: 81  SYNALISGL-------SLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIR 133

Query: 603 LIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS-AQHILDFEPEDE 647
           L + +P +  V  +  LLG  +     + GR++ A+ + D  P+ +
Sbjct: 134 LFQQMPERNHVS-YTVLLGGLL-----DAGRVNEARRLFDEMPDRD 173



 Score = 40.0 bits (92), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 23/98 (23%), Positives = 44/98 (44%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  S  + L  C     L     +H  +L+    +D+FA + L+ +Y+K   L  A ++F
Sbjct: 332 NYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVF 391

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREG 152
                ++ + + + I GY       +A+G+F  +   G
Sbjct: 392 HTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAG 429


>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Cucumis sativus]
 gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Cucumis sativus]
          Length = 679

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 221/601 (36%), Positives = 335/601 (55%), Gaps = 54/601 (8%)

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           N  FE +++FF  M      P+  TF FVLK+   L    V ++ H   LK   E D +V
Sbjct: 118 NSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLEFDSFV 177

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKK----DVIPWSFMIARYAQTDLSIDAVELFCRMR 335
            V+L+D+Y K  E+ +A ++F+E P+      V+ W+ +I  Y +    + A ELF  M 
Sbjct: 178 RVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELFDSM- 236

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
                P +                D G+                  N+L++ + K G M 
Sbjct: 237 -----PKK----------------DTGSW-----------------NSLINGFMKMGDMG 258

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
            + ELF + P++N V+W TM+ G+ Q G+  KA+  F  MLEE     + T  S L ACA
Sbjct: 259 RAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCMLEEGARPNDYTIVSALSACA 318

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
            + AL+ G+++H       + +++V+  AL+DMYAKCG+I  A  VF    +   + W+ 
Sbjct: 319 KIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSV 378

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           MI G+++HG   + L+ F+ M+  G +P+++ F+ VL+ACS+ G + +G  +F +M   Y
Sbjct: 379 MIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFFDNMRRGY 438

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS 635
            IEP ++HYT +V +LGRAG LD+A K I  +P  P  ++W AL  AC  H NVE+  L+
Sbjct: 439 LIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMPITPDFVVWGALFCACRTHKNVEMAELA 498

Query: 636 AQHILDFEPEDEATHVLLSNIYAMARSWEKA-----------ASKEPGLSWIENQGMVHY 684
           ++ +L  EP+   ++V LSN YA    W+ A           A K+PG S+IE    +H 
Sbjct: 499 SKKLLQLEPKHPGSYVFLSNAYASVGRWDDAERVRVSMRDHGAHKDPGWSFIEVDHKLHR 558

Query: 685 FRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALA 744
           F AGD +H     I   L+ ++  +R+ GY  ++  VL ++ E+EKE  L  HSEKLALA
Sbjct: 559 FVAGDNTHNRAVEIYSKLDEISASAREKGYTKEIECVLHNIEEEEKEEALGYHSEKLALA 618

Query: 745 FALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
           F +    P + +RI+KNLR+CVDCH+ +K  SK+ +REII+RD+ RFHHF DG CSCGD+
Sbjct: 619 FGIVSTRPGTTVRIVKNLRVCVDCHSFMKYASKMSKREIILRDMKRFHHFNDGVCSCGDY 678

Query: 805 W 805
           W
Sbjct: 679 W 679



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/395 (23%), Positives = 171/395 (43%), Gaps = 30/395 (7%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPER----NTISFVTTIQGYT 133
           +HC +LK G   D F    L+++YVK+  L  A K+FDE PE     + + +   I GY 
Sbjct: 162 LHCGILKFGLEFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYC 221

Query: 134 VSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAF 193
                V+A  LF ++ ++    +  ++ + +   + MG       +F  +     + N  
Sbjct: 222 RMGDLVKATELFDSMPKK----DTGSWNSLINGFMKMGDMGRAKELFVKM----PEKNVV 273

Query: 194 VGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL 253
             T +++ FS  G  E               +AL  F  M   G +PN++T    L AC 
Sbjct: 274 SWTTMVNGFSQNGDPE---------------KALETFFCMLEEGARPNDYTIVSALSACA 318

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSF 313
            +  +      H       ++++L +  AL+D+Y K G I +A ++F E  +K ++ WS 
Sbjct: 319 KIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSV 378

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
           MI  +A       A++ F  M+     P+   F++VL AC+    ++ G +    + R  
Sbjct: 379 MIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFFDNMRRGY 438

Query: 374 LLSDVFVSNAL-MDVYAKCGRMENSVELFAESP-KRNHVTWNTMIVGYVQLGEVGKAMIM 431
           L+        L +D+  + GR++ +++     P   + V W  +         V  A + 
Sbjct: 439 LIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMPITPDFVVWGALFCACRTHKNVEMAELA 498

Query: 432 FSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
             K+L+ + P    +Y  +  A AS+   +   +V
Sbjct: 499 SKKLLQLE-PKHPGSYVFLSNAYASVGRWDDAERV 532



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/349 (20%), Positives = 136/349 (38%), Gaps = 71/349 (20%)

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           F+ ++ A  +   L    QIH  + R  + S   V    +   +    ++ ++ +F    
Sbjct: 45  FIDLIHASNSTHKL---RQIHGQLYRCNVFSSSRVVTQFISSCSSLNSVDYAISIFQRFE 101

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
            +N   +N +I G  +      ++  F  ML+ ++    +T+  VL++ A+L+    G  
Sbjct: 102 LKNSYLFNALIRGLAENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRA 161

Query: 466 VHCLTVKANYDMDVVVANALIDMYAKC--------------------------------- 492
           +HC  +K   + D  V  +L+DMY K                                  
Sbjct: 162 LHCGILKFGLEFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYC 221

Query: 493 --GSITDARLVFDMMNDWNEVSWNA-------------------------------MISG 519
             G +  A  +FD M   +  SWN+                               M++G
Sbjct: 222 RMGDLVKATELFDSMPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNG 281

Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
           +S +G   + L+ F  M + G RPN+ T V  LSAC+  G L+ G      +  N G + 
Sbjct: 282 FSQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGN-GFKL 340

Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
            +   T++V +  + G+++ A K+      +  ++IW  ++    IH +
Sbjct: 341 NLVIGTALVDMYAKCGNIEHAEKVFHETK-EKGLLIWSVMIWGWAIHGH 388



 Score = 45.8 bits (107), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 26/110 (23%), Positives = 50/110 (45%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N ++  ++L +C +   L   + IH  +   G  L+L     L+++Y K   +  A K+F
Sbjct: 306 NDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEKVF 365

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFL 164
            E  E+  + +   I G+ +   F +A+  F  +   G + +   F A L
Sbjct: 366 HETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVL 415


>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 742

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 231/675 (34%), Positives = 356/675 (52%), Gaps = 84/675 (12%)

Query: 214 VFDGLFNDCF------EEALNFFSQMRAVGFKPNNFTFAFVLKACL-GLDTIRVAKSAHG 266
           +FD     CF      +  +  + +M  V   P+ FTF F+ K C  G   + + +  H 
Sbjct: 69  LFDTALRACFRASSGPDRPIILYRRMHGVDVPPDAFTFHFLFKCCARGGAHVLLGRMLHA 128

Query: 267 CALKTCYEMDL-YVAVALLDLYTKSGEISNARRIFEEM---------------------- 303
              +T     +  +A  ++ +Y + G   +ARR F+E                       
Sbjct: 129 ACFRTLLPSAVPLIASPIIHMYAELGLPGDARRAFDEASVKDVVAWTTVISGLAKMGLLD 188

Query: 304 ---------PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
                    P ++V+ W+ +I+ Y++   + +AV+ F  M    +AP++ T + +L AC 
Sbjct: 189 DARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTVIGMLSACG 248

Query: 355 TMEGLDLGNQIHSLVV-RVGLLSDVFVSNALMDVYAKCGRMENSVELF-----AESP--- 405
            ++ L+ G  +H LV  +  L+SD  V  AL+D+YAKCG    + E+F        P   
Sbjct: 249 QLKDLNFGCSLHMLVGDKRMLMSDKLVV-ALIDMYAKCGDTGRAREVFDALGRGRGPQPW 307

Query: 406 --------KRNHV----------------TWNTMIVGYVQLGEVGKAMIMFSKMLEEQVP 441
                   K  HV                T+N++I GY+  G + +A+++F+KM    + 
Sbjct: 308 NAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREALLLFTKMRRHGLG 367

Query: 442 ATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLV 501
           A   T   +L A ASL AL  G  +H    +   + DV +  AL+DMY KCG + +A + 
Sbjct: 368 ADNFTMVGLLTASASLGALPQGRALHACIEQRLVERDVYLGTALLDMYMKCGRVEEAMVA 427

Query: 502 FDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLL 561
           F  M+  +  +W+AMI G + +G+    L+ F  M+  G+  N++T++ VL+ACS+  LL
Sbjct: 428 FKQMSVRDVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGFHANSVTYIAVLTACSHSCLL 487

Query: 562 EQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLG 621
           ++G  YF  M   + I P IEHY  M+ LLGR+G LD+A  L++ +P QP+ +IW ++L 
Sbjct: 488 DEGRLYFDEMRLLHNIRPQIEHYGCMIDLLGRSGLLDEAMDLVQTMPMQPNAVIWASILS 547

Query: 622 ACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKE 670
           AC +H NV++ + +A H+L  EP ++A +V + NIY  +R WE A+            K 
Sbjct: 548 ACRVHKNVDLAQNAAHHLLKLEPAEDAVYVQMYNIYIDSRQWEDASKIRRLMEKRGVKKT 607

Query: 671 PGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEK 730
            G S I   G VH F  GD SH  +  I  M+E +  + + AGY P  S +  DV E+EK
Sbjct: 608 AGYSSIAVAGQVHKFIVGDRSHPQIAEIVVMMEEIGRRLKSAGYSPITSQITVDVDEEEK 667

Query: 731 ERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHR 790
           E+ L  HSEKLA+AF L  + P+ P+ IIKNLR+C DCH+AIK+IS++  REII+RD  R
Sbjct: 668 EQALLAHSEKLAIAFGLVSLAPNLPVHIIKNLRVCEDCHSAIKLISRLWNREIIVRDRSR 727

Query: 791 FHHFQDGCCSCGDFW 805
           FHHF+ G CSC DFW
Sbjct: 728 FHHFRGGVCSCNDFW 742



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 158/377 (41%), Gaps = 50/377 (13%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D+ A   +++   K+  L DA +L    P RN +++   I GY+ + +  EAV  F+++ 
Sbjct: 170 DVVAWTTVISGLAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSML 229

Query: 150 REG---------------HELNPFAFTAFLKVLVS---MGWAELCPCVFACVYK------ 185
            +G                +L    F   L +LV    M  ++        +Y       
Sbjct: 230 SDGIAPDEVTVIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKCGDTG 289

Query: 186 --------LGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDC-------- 222
                   LG         A+ID +   G V+ AR +FD +       FN          
Sbjct: 290 RAREVFDALGRGRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGG 349

Query: 223 -FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
              EAL  F++MR  G   +NFT   +L A   L  +   ++ H C  +   E D+Y+  
Sbjct: 350 RLREALLLFTKMRRHGLGADNFTMVGLLTASASLGALPQGRALHACIEQRLVERDVYLGT 409

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           ALLD+Y K G +  A   F++M  +DV  WS MI   A   +   A+E F  M+      
Sbjct: 410 ALLDMYMKCGRVEEAMVAFKQMSVRDVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGFHA 469

Query: 342 NQFTFVSVLQACATMEGLDLGN-QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           N  T+++VL AC+    LD G      + +   +   +     ++D+  + G ++ +++L
Sbjct: 470 NSVTYIAVLTACSHSCLLDEGRLYFDEMRLLHNIRPQIEHYGCMIDLLGRSGLLDEAMDL 529

Query: 401 FAESP-KRNHVTWNTMI 416
               P + N V W +++
Sbjct: 530 VQTMPMQPNAVIWASIL 546



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 95/389 (24%), Positives = 164/389 (42%), Gaps = 67/389 (17%)

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           +F+ MP    +  + + A +  +      + L+ RM    V P+ FTF  + + CA    
Sbjct: 59  LFDRMPCSTFLFDTALRACFRASSGPDRPIILYRRMHGVDVPPDAFTFHFLFKCCARGGA 118

Query: 359 -LDLGNQIHSLVVRVGLLSDV-FVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTM- 415
            + LG  +H+   R  L S V  +++ ++ +YA+ G   ++   F E+  ++ V W T+ 
Sbjct: 119 HVLLGRMLHAACFRTLLPSAVPLIASPIIHMYAELGLPGDARRAFDEASVKDVVAWTTVI 178

Query: 416 ------------------------------IVGYVQLGEVGKAMIMFSKMLEEQVPATEV 445
                                         I GY + G   +A+  F+ ML + +   EV
Sbjct: 179 SGLAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAPDEV 238

Query: 446 TYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLV---- 501
           T   +L AC  L  L  G  +H L       M   +  ALIDMYAKCG    AR V    
Sbjct: 239 TVIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKCGDTGRAREVFDAL 298

Query: 502 ----------------------------FDMMNDWNEVSWNAMISGYSMHGLSAEVLKVF 533
                                       FD M D + +++N++I+GY   G   E L +F
Sbjct: 299 GRGRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREALLLF 358

Query: 534 DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGR 593
             M++ G   +N T VG+L+A ++ G L QG A   + +    +E  +   T+++ +  +
Sbjct: 359 TKMRRHGLGADNFTMVGLLTASASLGALPQGRA-LHACIEQRLVERDVYLGTALLDMYMK 417

Query: 594 AGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
            G +++A    + +  +  V  W A++G 
Sbjct: 418 CGRVEEAMVAFKQMSVR-DVHTWSAMIGG 445



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 122/292 (41%), Gaps = 50/292 (17%)

Query: 95  NVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHE 154
           N +++ Y K+  +  A  LFD+M + + I+F + I GY    +  EA+ LF+ + R G  
Sbjct: 308 NAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREALLLFTKMRRHGLG 367

Query: 155 LNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKV 214
            + F     L    S+G       + AC+ +   + + ++GTAL+D +  CG VE A   
Sbjct: 368 ADNFTMVGLLTASASLGALPQGRALHACIEQRLVERDVYLGTALLDMYMKCGRVEEAMVA 427

Query: 215 FDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTI 258
           F  +                FN   + AL  F  M+  GF  N+ T+  VL AC      
Sbjct: 428 FKQMSVRDVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGFHANSVTYIAVLTAC------ 481

Query: 259 RVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARY 318
                +H C L    E  LY        + +   + N R   E         +  MI   
Sbjct: 482 -----SHSCLLD---EGRLY--------FDEMRLLHNIRPQIEH--------YGCMIDLL 517

Query: 319 AQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLV 369
            ++ L  +A++L   M    + PN   + S+L AC   + +DL  N  H L+
Sbjct: 518 GRSGLLDEAMDLVQTMP---MQPNAVIWASILSACRVHKNVDLAQNAAHHLL 566


>gi|242041629|ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
 gi|241922063|gb|EER95207.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
          Length = 635

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 207/527 (39%), Positives = 316/527 (59%), Gaps = 14/527 (2%)

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM-RQAFVA--PNQFTFVSV 349
           +++AR +F+ MP++D   WS +++ +A+      A+ ++ RM R+   A   N+FT  S 
Sbjct: 109 LASARALFDRMPRRDHFSWSAIVSAHARHGQPRAALAIYRRMLREPGSAGVDNEFTASSA 168

Query: 350 LQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNH 409
           L A         G ++H  VVR G+ +D  V +AL D+YAKCGR++++  +F   P R+ 
Sbjct: 169 LAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKCGRVDDARSVFDRMPVRDV 228

Query: 410 VTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCL 469
           V+W  M+  Y      G+   +F +ML   +   E TY+ VLRACA   + + G QVH  
Sbjct: 229 VSWTAMVERYFDARRDGEGFRLFVRMLRSGIQPNEFTYAGVLRACAEFTSEKLGKQVHGR 288

Query: 470 TVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEV 529
             K+         +AL+ MY+K G +  A  VF  M   + VSW AMISGY+ +G   E 
Sbjct: 289 MTKSRAGDSCFAESALVHMYSKYGDMGTAVRVFRGMPKLDLVSWTAMISGYAQNGQPDEA 348

Query: 530 LKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVS 589
           L+ FD++ + G RP+++TFVGVLSAC++ GL+++G + F S+   YGIE   +HY  ++ 
Sbjct: 349 LRYFDMLLRSGCRPDHVTFVGVLSACAHAGLVDKGLSIFHSIKDEYGIEHTADHYACVID 408

Query: 590 LLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEAT 649
           LL R+G  ++A ++I  +  +P+  +W +LLG C IH NV + R +A+ + + EPE+ AT
Sbjct: 409 LLSRSGLFERAEEMINTMSVKPNKFLWASLLGGCRIHKNVRLARWAAEALFEIEPENPAT 468

Query: 650 HVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNII 698
           +V L+NIYA    ++           K  +K P  SWIE    +H F  GD  H     +
Sbjct: 469 YVTLANIYASVGLFDEVENTRRIMELKGITKMPASSWIEVGTRMHVFLVGDKLHPQAEQV 528

Query: 699 RGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRI 758
             +L+ L +K R+ GY+ D   VL DV +++K++ +  HSE+LA+AF +   P  +PI++
Sbjct: 529 YALLKKLYVKMREEGYVADTGFVLHDVEDEQKQQDIGYHSERLAVAFGIIATPKGAPIKV 588

Query: 759 IKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            KNLRIC DCHT IK+ISKIVQREII+RD +RFHHF++G CSC D+W
Sbjct: 589 FKNLRICGDCHTTIKLISKIVQREIIVRDSNRFHHFKNGSCSCRDYW 635



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 135/266 (50%), Gaps = 4/266 (1%)

Query: 261 AKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQ 320
            +  H   ++   + D  V  AL D+Y K G + +AR +F+ MP +DV+ W+ M+ RY  
Sbjct: 181 GRELHCHVVRRGIDADAVVWSALADMYAKCGRVDDARSVFDRMPVRDVVSWTAMVERYFD 240

Query: 321 TDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFV 380
                +   LF RM ++ + PN+FT+  VL+ACA      LG Q+H  + +       F 
Sbjct: 241 ARRDGEGFRLFVRMLRSGIQPNEFTYAGVLRACAEFTSEKLGKQVHGRMTKSRAGDSCFA 300

Query: 381 SNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQV 440
            +AL+ +Y+K G M  +V +F   PK + V+W  MI GY Q G+  +A+  F  +L    
Sbjct: 301 ESALVHMYSKYGDMGTAVRVFRGMPKLDLVSWTAMISGYAQNGQPDEALRYFDMLLRSGC 360

Query: 441 PATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA 498
               VT+  VL ACA    ++ G+ +   ++K  Y ++    +   +ID+ ++ G    A
Sbjct: 361 RPDHVTFVGVLSACAHAGLVDKGLSIFH-SIKDEYGIEHTADHYACVIDLLSRSGLFERA 419

Query: 499 RLVFDMMN-DWNEVSWNAMISGYSMH 523
             + + M+   N+  W +++ G  +H
Sbjct: 420 EEMINTMSVKPNKFLWASLLGGCRIH 445



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 179/388 (46%), Gaps = 30/388 (7%)

Query: 90  DLFATNVLLNVYVKLNR-LPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTL 148
           D+ + N L+    +  R L  A  LFD MP R+  S+   +  +    Q   A+ ++  +
Sbjct: 91  DVCSYNTLVAALGRSPRGLASARALFDRMPRRDHFSWSAIVSAHARHGQPRAALAIYRRM 150

Query: 149 HREGHEL---NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVC 205
            RE       N F  ++ L    +   A     +   V + G D++A V +AL D ++ C
Sbjct: 151 LREPGSAGVDNEFTASSALAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKC 210

Query: 206 GCVEFARKVFD-----------GLFNDCFE-----EALNFFSQMRAVGFKPNNFTFAFVL 249
           G V+ AR VFD            +    F+     E    F +M   G +PN FT+A VL
Sbjct: 211 GRVDDARSVFDRMPVRDVVSWTAMVERYFDARRDGEGFRLFVRMLRSGIQPNEFTYAGVL 270

Query: 250 KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
           +AC    + ++ K  HG   K+      +   AL+ +Y+K G++  A R+F  MPK D++
Sbjct: 271 RACAEFTSEKLGKQVHGRMTKSRAGDSCFAESALVHMYSKYGDMGTAVRVFRGMPKLDLV 330

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI-HSL 368
            W+ MI+ YAQ     +A+  F  + ++   P+  TFV VL ACA    +D G  I HS+
Sbjct: 331 SWTAMISGYAQNGQPDEALRYFDMLLRSGCRPDHVTFVGVLSACAHAGLVDKGLSIFHSI 390

Query: 369 VVRVGLLSDVFVSNALMDVYAKCGRMENSVELF-AESPKRNHVTWNTMIVG-----YVQL 422
               G+         ++D+ ++ G  E + E+    S K N   W +++ G      V+L
Sbjct: 391 KDEYGIEHTADHYACVIDLLSRSGLFERAEEMINTMSVKPNKFLWASLLGGCRIHKNVRL 450

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSV 450
                A  +F   +E + PAT VT +++
Sbjct: 451 ARWA-AEALFE--IEPENPATYVTLANI 475



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 106/252 (42%), Gaps = 29/252 (11%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           +HC V+++G   D    + L ++Y K  R+ DA  +FD MP R+ +S+   ++ Y  + +
Sbjct: 184 LHCHVVRRGIDADAVVWSALADMYAKCGRVDDARSVFDRMPVRDVVSWTAMVERYFDARR 243

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
             E   LF  + R G + N F +   L+        +L   V   + K     + F  +A
Sbjct: 244 DGEGFRLFVRMLRSGIQPNEFTYAGVLRACAEFTSEKLGKQVHGRMTKSRAGDSCFAESA 303

Query: 198 LIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRAVGFKPN 241
           L+  +S  G +  A +VF G+                 N   +EAL +F  +   G +P+
Sbjct: 304 LVHMYSKYGDMGTAVRVFRGMPKLDLVSWTAMISGYAQNGQPDEALRYFDMLLRSGCRPD 363

Query: 242 NFTFAFVLKACL-------GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
           + TF  VL AC        GL      K  +G      +  D Y  V  +DL ++SG   
Sbjct: 364 HVTFVGVLSACAHAGLVDKGLSIFHSIKDEYGIE----HTADHYACV--IDLLSRSGLFE 417

Query: 295 NARRIFEEMPKK 306
            A  +   M  K
Sbjct: 418 RAEEMINTMSVK 429



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 105/253 (41%), Gaps = 27/253 (10%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +YA  L++C +    +    +H ++ K       FA + L+++Y K   +  A ++F
Sbjct: 262 NEFTYAGVLRACAEFTSEKLGKQVHGRMTKSRAGDSCFAESALVHMYSKYGDMGTAVRVF 321

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             MP+ + +S+   I GY  + Q  EA+  F  L R G   +   F   L      G  +
Sbjct: 322 RGMPKLDLVSWTAMISGYAQNGQPDEALRYFDMLLRSGCRPDHVTFVGVLSACAHAGLVD 381

Query: 175 LCPCVFACV---YKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFS 231
               +F  +   Y + H ++ +    +ID  S  G  E A            EE +N  S
Sbjct: 382 KGLSIFHSIKDEYGIEHTADHY--ACVIDLLSRSGLFERA------------EEMINTMS 427

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
                  KPN F +A +L  C     +R+A+ A   AL      +    V L ++Y   G
Sbjct: 428 ------VKPNKFLWASLLGGCRIHKNVRLARWA-AEALFEIEPENPATYVTLANIYASVG 480

Query: 292 ---EISNARRIFE 301
              E+ N RRI E
Sbjct: 481 LFDEVENTRRIME 493


>gi|302824721|ref|XP_002994001.1| hypothetical protein SELMODRAFT_138033 [Selaginella moellendorffii]
 gi|300138163|gb|EFJ04941.1| hypothetical protein SELMODRAFT_138033 [Selaginella moellendorffii]
          Length = 948

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 240/784 (30%), Positives = 388/784 (49%), Gaps = 41/784 (5%)

Query: 60  ATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM-- 117
           A ++++     DL      H  + + G  LD      L+ +Y     +  A + FD    
Sbjct: 168 AMAVEAAGMKRDLSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAFL 227

Query: 118 --PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAEL 175
             P  + +S+   +        ++ A+ LF  +  +G   +   F   L  ++ +G    
Sbjct: 228 RAPSSDVVSWTKILAACNEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQ 287

Query: 176 CPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN--------------- 220
              + + V     + ++ VGTA++  ++  G ++ A + FD +                 
Sbjct: 288 GKRIHSMVLDRELERDSMVGTAVVKMYARIGSIQDACRAFDRIDQPGVAAWTVLVGAYCR 347

Query: 221 -DCFEEALNFFSQMRAVGFKPNNFTFAFVLKAC--LGLDTIRVAKSAHGCALKTCYEMDL 277
              F   +    +M A G KPN  TF  +L  C  L L+  +  ++      +   +   
Sbjct: 348 LGSFNSVMQILERMEAEGVKPNEVTFITILDTCKNLALEDGKKIQALASEQQQRSLDASA 407

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
            +  A++ ++++   +  AR  F+++ +K V  ++ MIA YA      +A+ +F  M + 
Sbjct: 408 RIGTAVIGMFSRFSSMILAREAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRR 467

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            VA +       + ACA++  L+ G  +H   + +GL  D  V  AL+D+Y++CG ME++
Sbjct: 468 RVAADNLVLAVAISACASIPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDA 527

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
             +F E  + + V W+ MI    + G+   A+ M ++M ++    +  T   VL ACA  
Sbjct: 528 SAVFGEIERPDTVAWSAMIAALGRHGDPRGAVAMAARMQQDGWRPSGATMVGVLAACAHA 587

Query: 458 AALE-PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
             +E    +VH L V   +D D  V  A++ MYAK GSI +A   FD + + +  +W  M
Sbjct: 588 GMIEEAARKVHSLLVDGGFDSDPEVKFAVMRMYAKVGSIQEACNAFDKIENPDVKAWTTM 647

Query: 517 ISGYSMHG---LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA 573
           +  Y   G    S   LK+  +MQQ G  P+ +TFV +L+AC+ GG L++   YFK M  
Sbjct: 648 LEAYCRLGKYNASDRALKLARMMQQDGVMPDKVTFVDILTACAYGGHLQEAGRYFKDMKF 707

Query: 574 NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGR 633
           +YG+ P +EHY ++V  + R G+L +A  LI  +P Q + +IW ALL  C   N+    +
Sbjct: 708 DYGLVPEMEHYVALVDTVARKGYLQEAEDLIRMVPLQVNEIIWFALLECCKSQNDAPRTQ 767

Query: 634 LSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMV 682
              + I+     +     L +  + +A  WE+A             KEPG S I  +  V
Sbjct: 768 RVGEIIMKI---NNKLDPLGTGAHRVAARWEEAKRVRKLMTDRGIKKEPGKSMISIKNTV 824

Query: 683 HYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLA 742
           H F AGD SH     I   ++ +    +K GYIPD   VL DV ED+KER LW HSE+LA
Sbjct: 825 HGFVAGDRSHPHTREIYAEVDRITALIKKDGYIPDTRYVLHDVPEDKKERLLWYHSERLA 884

Query: 743 LAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHF-QDGCCSC 801
           +A+     PP  P+R+IKNLR+C DCHTA K+ +K++QREII+RD  RFHHF +DG CSC
Sbjct: 885 MAYGHMNTPPGQPLRVIKNLRVCGDCHTASKLYAKVMQREIIVRDNRRFHHFAKDGTCSC 944

Query: 802 GDFW 805
           GD+W
Sbjct: 945 GDYW 948



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 152/592 (25%), Positives = 271/592 (45%), Gaps = 25/592 (4%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
           F+  SY   LQ C +   +     +H  + +     + F  N L+ +Y       +A ++
Sbjct: 61  FDVDSYQHVLQLCTRLRAMAEGARVHDHIRRSRMEAERFVGNDLVFMYAAFGNPGEARRI 120

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           FD +   N +SF   ++ Y  +    EA+ +      +  + +P      ++        
Sbjct: 121 FDGLGSHNVLSFTAIMRAYVTAGDPDEALKILHLARLKAFKADPSMLAMAVEAAGMKRDL 180

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF-------------- 219
            L       + + G+D +A V  +LI  +S CG +E A + FD  F              
Sbjct: 181 SLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAFLRAPSSDVVSWTKI 240

Query: 220 -NDCFEE-----ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY 273
              C E      AL+ F +MR  G  P+   F  VL + +GL  I   K  H   L    
Sbjct: 241 LAACNEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMVLDREL 300

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
           E D  V  A++ +Y + G I +A R F+ + +  V  W+ ++  Y +       +++  R
Sbjct: 301 ERDSMVGTAVVKMYARIGSIQDACRAFDRIDQPGVAAWTVLVGAYCRLGSFNSVMQILER 360

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV---RVGLLSDVFVSNALMDVYAK 390
           M    V PN+ TF+++L  C  +  L+ G +I +L     +  L +   +  A++ ++++
Sbjct: 361 MEAEGVKPNEVTFITILDTCKNL-ALEDGKKIQALASEQQQRSLDASARIGTAVIGMFSR 419

Query: 391 CGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
              M  + E F +  +++   +  MI GY    +  +A+ +F +M+  +V A  +  +  
Sbjct: 420 FSSMILAREAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADNLVLAVA 479

Query: 451 LRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE 510
           + ACAS+  LE G  +HC  +      D VV  AL+DMY++CGS+ DA  VF  +   + 
Sbjct: 480 ISACASIPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEIERPDT 539

Query: 511 VSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKS 570
           V+W+AMI+    HG     + +   MQQ GWRP+  T VGVL+AC++ G++E+      S
Sbjct: 540 VAWSAMIAALGRHGDPRGAVAMAARMQQDGWRPSGATMVGVLAACAHAGMIEEAARKVHS 599

Query: 571 MVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           ++ + G +   E   +++ +  + G + +A    + I   P V  W  +L A
Sbjct: 600 LLVDGGFDSDPEVKFAVMRMYAKVGSIQEACNAFDKIE-NPDVKAWTTMLEA 650



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 122/486 (25%), Positives = 214/486 (44%), Gaps = 30/486 (6%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           + T L S I   D+     IH  VL +    D      ++ +Y ++  + DA + FD + 
Sbjct: 272 FVTVLDSVIGLGDIAQGKRIHSMVLDRELERDSMVGTAVVKMYARIGSIQDACRAFDRID 331

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW--AELC 176
           +    ++   +  Y     F   + +   +  EG + N   F   L    ++     +  
Sbjct: 332 QPGVAAWTVLVGAYCRLGSFNSVMQILERMEAEGVKPNEVTFITILDTCKNLALEDGKKI 391

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------N 220
             + +   +   D++A +GTA+I  FS    +  AR+ FD +                 N
Sbjct: 392 QALASEQQQRSLDASARIGTAVIGMFSRFSSMILAREAFDKISQKSVAAYTAMIAGYANN 451

Query: 221 DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
               EAL  F +M       +N   A  + AC  +  +   K+ H  A+      D  V 
Sbjct: 452 KQPREALAIFQEMIRRRVAADNLVLAVAISACASIPDLEEGKALHCSAMDLGLHRDDVVR 511

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
            AL+D+Y++ G + +A  +F E+ + D + WS MIA   +      AV +  RM+Q    
Sbjct: 512 TALVDMYSRCGSMEDASAVFGEIERPDTVAWSAMIAALGRHGDPRGAVAMAARMQQDGWR 571

Query: 341 PNQFTFVSVLQACATMEGL-DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
           P+  T V VL ACA    + +   ++HSL+V  G  SD  V  A+M +YAK G ++ +  
Sbjct: 572 PSGATMVGVLAACAHAGMIEEAARKVHSLLVDGGFDSDPEVKFAVMRMYAKVGSIQEACN 631

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVG---KAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
            F +    +   W TM+  Y +LG+     +A+ +   M ++ V   +VT+  +L ACA 
Sbjct: 632 AFDKIENPDVKAWTTMLEAYCRLGKYNASDRALKLARMMQQDGVMPDKVTFVDILTACAY 691

Query: 457 LAALEPGMQVHCLTVKANY----DMDVVVANALIDMYAKCGSITDARLVFDMMN-DWNEV 511
              L+   + +   +K +Y    +M+  V  AL+D  A+ G + +A  +  M+    NE+
Sbjct: 692 GGHLQEAGR-YFKDMKFDYGLVPEMEHYV--ALVDTVARKGYLQEAEDLIRMVPLQVNEI 748

Query: 512 SWNAMI 517
            W A++
Sbjct: 749 IWFALL 754


>gi|242096366|ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
 gi|241916896|gb|EER90040.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
          Length = 588

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 207/565 (36%), Positives = 325/565 (57%), Gaps = 32/565 (5%)

Query: 252 CLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPW 311
           C+    +R  +  H   +   Y   LY+A  L+ +Y + G + +AR + + MP+++V+ W
Sbjct: 45  CVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMPERNVVSW 104

Query: 312 SFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR 371
           + MI+ Y+Q +    A ELF  M +A                    G+    Q+H+  V+
Sbjct: 105 TAMISGYSQNERPDQAWELFIMMLRA--------------------GIHQVKQVHAFAVK 144

Query: 372 VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIM 431
                 +FV ++L+D+YAK   ++ +  +F   P R+ V++  ++ GY QLG   +A+ +
Sbjct: 145 TNFELHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQLGLDEEALDL 204

Query: 432 FSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAK 491
           F  +  E +   +VT++++L A + L++++ G QVH L ++      + + N+LIDMY+K
Sbjct: 205 FRLLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSK 264

Query: 492 CGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGV 551
           CG +  +R VFD M + + VSWNAM+ GY  HGL+ EV+++F  M     +P+++T + V
Sbjct: 265 CGKLLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSMCDE-VKPDSVTLLAV 323

Query: 552 LSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQP 611
           LS  S+GGL+++G   F  +V         EHY  ++ LLGR+G L KA  LIE +PFQP
Sbjct: 324 LSGYSHGGLVDEGLDMFDHIVKEQSTLLNTEHYGCVIDLLGRSGQLQKALNLIEKMPFQP 383

Query: 612 SVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE------- 664
           +  IW +LLGAC +H NV +G   AQ +LD EPE+   +V+LSNIYA A  W+       
Sbjct: 384 TRAIWGSLLGACRVHTNVHVGEFVAQKLLDIEPENAGNYVILSNIYAAAGMWKDVFRVRK 443

Query: 665 ----KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSA 720
               K   KEPG SW+    ++H F + +  H     I   ++ + +  + AG++PDLS 
Sbjct: 444 LMLKKTVIKEPGRSWMILDKVIHTFHSCERFHPRKEDINAKIKEIYVAIKAAGFVPDLSC 503

Query: 721 VLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQ 780
           VL DV +++KER L  HSEKLA+ F L   P    I+++KNLRICVDCH   K +SK+  
Sbjct: 504 VLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCHNFAKFVSKVYG 563

Query: 781 REIIIRDVHRFHHFQDGCCSCGDFW 805
           REI +RD +RFH   +G C+CGD+W
Sbjct: 564 REISLRDKNRFHLITEGACTCGDYW 588



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/384 (25%), Positives = 181/384 (47%), Gaps = 51/384 (13%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
           H Y  ++  C++   L+    +H +++  G    L+    L+ +Y +   L DA  + D 
Sbjct: 36  HDYDDAITECVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDG 95

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREG-HELNPFAFTAFLKVLVSMGWAEL 175
           MPERN +S+   I GY+ + +  +A  LF  + R G H++                    
Sbjct: 96  MPERNVVSWTAMISGYSQNERPDQAWELFIMMLRAGIHQVKQ------------------ 137

Query: 176 CPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-FNDCF----------- 223
              V A   K   + + FVG++L+D ++    ++ AR+VFD L   D             
Sbjct: 138 ---VHAFAVKTNFELHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQ 194

Query: 224 ----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
               EEAL+ F  +   G + N  TF  +L A  GL ++   K  HG  L+   E+  ++
Sbjct: 195 LGLDEEALDLFRLLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRR--ELPFFM 252

Query: 280 AV--ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
           A+  +L+D+Y+K G++  +RR+F+ MP++ V+ W+ M+  Y +  L+ + V+LF  M   
Sbjct: 253 ALQNSLIDMYSKCGKLLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSMCDE 312

Query: 338 FVAPNQFTFVSVLQACA----TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
            V P+  T ++VL   +      EGLD+ + I   V     L +      ++D+  + G+
Sbjct: 313 -VKPDSVTLLAVLSGYSHGGLVDEGLDMFDHI---VKEQSTLLNTEHYGCVIDLLGRSGQ 368

Query: 394 MENSVELFAESP-KRNHVTWNTMI 416
           ++ ++ L  + P +     W +++
Sbjct: 369 LQKALNLIEKMPFQPTRAIWGSLL 392



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 52/94 (55%)

Query: 447 YSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN 506
           Y   +  C    AL  G QVH   V A Y   + +A  L+ MYA+CG++ DAR V D M 
Sbjct: 38  YDDAITECVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMP 97

Query: 507 DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG 540
           + N VSW AMISGYS +    +  ++F +M + G
Sbjct: 98  ERNVVSWTAMISGYSQNERPDQAWELFIMMLRAG 131


>gi|356519586|ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Glycine max]
          Length = 582

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 219/560 (39%), Positives = 327/560 (58%), Gaps = 12/560 (2%)

Query: 258 IRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIAR 317
           +R  + AH   + T       +   LL L   +G I+  RR+F  +   D   ++ +I  
Sbjct: 23  LRRLQQAHAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVSDPDSFLFNSLIKA 82

Query: 318 YAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD 377
            +    S+DAV  + RM  + + P+ +TF SV++ACA +  L LG  +HS V   G  S+
Sbjct: 83  SSNFGFSLDAVFFYRRMLHSRIVPSTYTFTSVIKACADLSLLRLGTIVHSHVFVSGYASN 142

Query: 378 VFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
            FV  AL+  YAK      + ++F E P+R+ + WN+MI GY Q G   +A+ +F+KM E
Sbjct: 143 SFVQAALVTFYAKSCTPRVARKVFDEMPQRSIIAWNSMISGYEQNGLASEAVEVFNKMRE 202

Query: 438 EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITD 497
                   T+ SVL AC+ L +L+ G  +H   V     M+VV+A +L++M+++CG +  
Sbjct: 203 SGGEPDSATFVSVLSACSQLGSLDLGCWLHECIVGTGIRMNVVLATSLVNMFSRCGDVGR 262

Query: 498 ARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSN 557
           AR VFD MN+ N VSW AMISGY MHG   E ++VF  M+  G  PN +T+V VLSAC++
Sbjct: 263 ARAVFDSMNEGNVVSWTAMISGYGMHGYGVEAMEVFHRMKACGVVPNRVTYVAVLSACAH 322

Query: 558 GGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSV-MIW 616
            GL+ +G   F SM   YG+ P +EH+  MV + GR G L++A + + G+  +  V  +W
Sbjct: 323 AGLINEGRLVFASMKQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVRGLSSEELVPAVW 382

Query: 617 RALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-------- 668
            A+LGAC +H N ++G   A++++  EPE+   +VLLSN+YA+A   ++  S        
Sbjct: 383 TAMLGACKMHKNFDLGVEVAENLISAEPENPGHYVLLSNMYALAGRMDRVESVRNVMIQR 442

Query: 669 ---KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDV 725
              K+ G S I+ +   + F  GD SH + N I   L+ L  + + AGY P   + + ++
Sbjct: 443 GLKKQVGYSTIDVENRSYLFSMGDKSHPETNEIYCYLDELMWRCKDAGYAPAPESAMHEL 502

Query: 726 REDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIII 785
            E+E+E  L  HSEKLA+AF L K      +RI+KNLRIC DCH+AIK IS ++ REII+
Sbjct: 503 EEEEREYALRYHSEKLAVAFGLMKTCHGVTLRIVKNLRICEDCHSAIKFISVVMNREIIV 562

Query: 786 RDVHRFHHFQDGCCSCGDFW 805
           RD  RFHHF++G CSC D+W
Sbjct: 563 RDKLRFHHFREGSCSCSDYW 582



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 184/368 (50%), Gaps = 29/368 (7%)

Query: 188 HDSNAFVGTALIDAFSVCGCVEFARKVFDG-------LFNDCFEEALNFFSQMRAVGFK- 239
           H S A + T L+      G + + R++F         LFN   + + NF   + AV F  
Sbjct: 39  HRSRALL-TKLLTLSCAAGSIAYTRRLFRSVSDPDSFLFNSLIKASSNFGFSLDAVFFYR 97

Query: 240 --------PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
                   P+ +TF  V+KAC  L  +R+    H     + Y  + +V  AL+  Y KS 
Sbjct: 98  RMLHSRIVPSTYTFTSVIKACADLSLLRLGTIVHSHVFVSGYASNSFVQAALVTFYAKSC 157

Query: 292 EISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQ 351
               AR++F+EMP++ +I W+ MI+ Y Q  L+ +AVE+F +MR++   P+  TFVSVL 
Sbjct: 158 TPRVARKVFDEMPQRSIIAWNSMISGYEQNGLASEAVEVFNKMRESGGEPDSATFVSVLS 217

Query: 352 ACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
           AC+ +  LDLG  +H  +V  G+  +V ++ +L++++++CG +  +  +F    + N V+
Sbjct: 218 ACSQLGSLDLGCWLHECIVGTGIRMNVVLATSLVNMFSRCGDVGRARAVFDSMNEGNVVS 277

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
           W  MI GY   G   +AM +F +M    V    VTY +VL ACA    +  G  V   ++
Sbjct: 278 WTAMISGYGMHGYGVEAMEVFHRMKACGVVPNRVTYVAVLSACAHAGLINEGRLVFA-SM 336

Query: 472 KANYDMDVVVAN--ALIDMYAKCGSITDARLVFDMMNDWNEVS--WNAMISGYSMHGLSA 527
           K  Y +   V +   ++DM+ + G + +A      ++    V   W AM+    MH    
Sbjct: 337 KQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVRGLSSEELVPAVWTAMLGACKMH---- 392

Query: 528 EVLKVFDL 535
              K FDL
Sbjct: 393 ---KNFDL 397



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/321 (24%), Positives = 157/321 (48%), Gaps = 17/321 (5%)

Query: 97  LLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELN 156
           LL +      +    +LF  + + ++  F + I+  +     ++AV  +  +       +
Sbjct: 48  LLTLSCAAGSIAYTRRLFRSVSDPDSFLFNSLIKASSNFGFSLDAVFFYRRMLHSRIVPS 107

Query: 157 PFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD 216
            + FT+ +K    +    L   V + V+  G+ SN+FV  AL+  ++       ARKVFD
Sbjct: 108 TYTFTSVIKACADLSLLRLGTIVHSHVFVSGYASNSFVQAALVTFYAKSCTPRVARKVFD 167

Query: 217 GL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRV 260
            +                 N    EA+  F++MR  G +P++ TF  VL AC  L ++ +
Sbjct: 168 EMPQRSIIAWNSMISGYEQNGLASEAVEVFNKMRESGGEPDSATFVSVLSACSQLGSLDL 227

Query: 261 AKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQ 320
               H C + T   M++ +A +L++++++ G++  AR +F+ M + +V+ W+ MI+ Y  
Sbjct: 228 GCWLHECIVGTGIRMNVVLATSLVNMFSRCGDVGRARAVFDSMNEGNVVSWTAMISGYGM 287

Query: 321 TDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIH-SLVVRVGLLSDVF 379
               ++A+E+F RM+   V PN+ T+V+VL ACA    ++ G  +  S+    G++  V 
Sbjct: 288 HGYGVEAMEVFHRMKACGVVPNRVTYVAVLSACAHAGLINEGRLVFASMKQEYGVVPGVE 347

Query: 380 VSNALMDVYAKCGRMENSVEL 400
               ++D++ + G +  + + 
Sbjct: 348 HHVCMVDMFGRGGLLNEAYQF 368



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 95/403 (23%), Positives = 169/403 (41%), Gaps = 45/403 (11%)

Query: 27  GLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKG 86
           G S  A    ++  +S   P T++        + + +++C     L+    +H  V   G
Sbjct: 87  GFSLDAVFFYRRMLHSRIVPSTYT--------FTSVIKACADLSLLRLGTIVHSHVFVSG 138

Query: 87  NCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFS 146
              + F    L+  Y K      A K+FDEMP+R+ I++ + I GY  +    EAV +F+
Sbjct: 139 YASNSFVQAALVTFYAKSCTPRVARKVFDEMPQRSIIAWNSMISGYEQNGLASEAVEVFN 198

Query: 147 TLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCG 206
            +   G E +   F + L     +G  +L   +  C+   G   N  + T+L++ FS CG
Sbjct: 199 KMRESGGEPDSATFVSVLSACSQLGSLDLGCWLHECIVGTGIRMNVVLATSLVNMFSRCG 258

Query: 207 CVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLK 250
            V  AR VFD +                 +    EA+  F +M+A G  PN  T+  VL 
Sbjct: 259 DVGRARAVFDSMNEGNVVSWTAMISGYGMHGYGVEAMEVFHRMKACGVVPNRVTYVAVLS 318

Query: 251 ACLGLDTIRVAKSAHGCALKTCYEMDLYVA--VALLDLYTKSGEISNARRIFEEMPKKDV 308
           AC     I   +     ++K  Y +   V   V ++D++ + G ++ A +    +  +++
Sbjct: 319 ACAHAGLINEGRLVFA-SMKQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVRGLSSEEL 377

Query: 309 IP--WSFMIAR---YAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
           +P  W+ M+     +   DL ++  E           P  +  +S + A A    +D   
Sbjct: 378 VPAVWTAMLGACKMHKNFDLGVEVAENLISAEPE--NPGHYVLLSNMYALAGR--MDRVE 433

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
            + +++++ GL   V  S   +DV       EN   LF+   K
Sbjct: 434 SVRNVMIQRGLKKQVGYST--IDV-------ENRSYLFSMGDK 467


>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
 gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
          Length = 696

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 220/652 (33%), Positives = 359/652 (55%), Gaps = 46/652 (7%)

Query: 196 TALIDAFSVCGCVEFARKVFDGL-FNDCF---------------EEALNFFSQMRAVGFK 239
           TAL+  ++ CG ++ A++VF+G+   D F               E A+  + +M A G +
Sbjct: 49  TALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVE 108

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           PN  TFA  L  C  +  +   ++ H   L +    D  +  +LL++Y K  E+  AR++
Sbjct: 109 PNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKV 168

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA-FVAPNQFTFVSVLQACATMEG 358
           FE M  ++V  ++ MI+ Y Q     +A+ELF RM +   + PN +TF ++L A   +  
Sbjct: 169 FEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGN 228

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           L+ G ++H  +   G  ++V V NAL+ +Y KCG    + ++F     RN ++W +MI  
Sbjct: 229 LEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAA 288

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           Y Q G   +A+ +F +M    V  + V++SS L ACA L AL+ G ++H   V+A+    
Sbjct: 289 YAQHGNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHL-AS 344

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
             +  +L+ MYA+CGS+ DAR VF+ M   +  S NAMI+ ++ HG   + L+++  M+Q
Sbjct: 345 PQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQ 404

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLD 598
            G   + +TFV VL ACS+  L+     +F+S+V ++G+ P +EHY  MV +LGR+G L 
Sbjct: 405 EGIPADGITFVSVLVACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLG 464

Query: 599 KAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYA 658
            A +L+E +P+Q   + W  LL  C  H ++  G  +A+ + +  P +   +V LSN+YA
Sbjct: 465 DAEELVETMPYQTDAVAWMTLLSGCKRHGDLNRGERAARKVFELAPAETLPYVFLSNMYA 524

Query: 659 MARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHAD-------MNIIRG 700
            A+ +           E+  +    +S+IE    +H F +G             M  +R 
Sbjct: 525 AAKRFDDARRVRKEMEERGVTTPVAVSYIEIDNELHMFTSGGRDEQQEGHDGRTMERVRS 584

Query: 701 MLEWLNMKSRKAGYIPDLSAVLRD----VREDEKERYLWVHSEKLALAFALF--KMPPSS 754
           +L  L    ++AGY+PD   V  +      E+EK+R L  HSE+LA+A+ L   K P  S
Sbjct: 585 LLLELLEPMKQAGYVPDTREVYLEQQGGTSEEEKQRSLCFHSERLAIAYGLIAAKDPDDS 644

Query: 755 -PIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            P+R++ + R+C DCH+AIK++S I+++ I +RD +RFHHF+ G CSCGD W
Sbjct: 645 RPLRVVNSHRVCSDCHSAIKLLSDIIEKTIFVRDGNRFHHFEKGACSCGDHW 696



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 125/372 (33%), Positives = 195/372 (52%), Gaps = 6/372 (1%)

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           M   G   + F    ++ AC  L  +   +  H   + T +  D+ +  ALL +Y K G 
Sbjct: 1   MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           + +A+R+FE M  KD+  WS +I+ YA+      AV L+ RM    V PN  TF   L  
Sbjct: 61  LDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGG 120

Query: 353 CATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTW 412
           CA++ GL  G  IH  ++   +  D  + ++L+++Y KC  M  + ++F     RN  ++
Sbjct: 121 CASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSY 180

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLE-EQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
             MI  YVQ GE  +A+ +FS+M + E +     T++++L A   L  LE G +VH    
Sbjct: 181 TAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLA 240

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
              +D +VVV NAL+ MY KCGS  +AR VFD M   N +SW +MI+ Y+ HG   E L 
Sbjct: 241 SRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALN 300

Query: 532 VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLL 591
           +F  M      P+ ++F   L+AC+  G L++G      +V  +   P +E  TS++S+ 
Sbjct: 301 LFKRMD---VEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQME--TSLLSMY 355

Query: 592 GRAGHLDKAAKL 603
            R G LD A ++
Sbjct: 356 ARCGSLDDARRV 367



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 165/312 (52%), Gaps = 4/312 (1%)

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           M +  +  ++F   S++ AC  ++ L+ G ++H  ++  G  +D+ +  AL+ +YAKCG 
Sbjct: 1   MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           ++++  +F     ++   W+++I  Y + G    A++++ +M+ E V    VT++  L  
Sbjct: 61  LDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGG 120

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
           CAS+A L  G  +H   + +    D V+ ++L++MY KC  + +AR VF+ M   N  S+
Sbjct: 121 CASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSY 180

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQ-RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
            AMIS Y   G  AE L++F  M +     PN  TF  +L A    G LE+G    + + 
Sbjct: 181 TAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHL- 239

Query: 573 ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIG 632
           A+ G +  +    ++V++ G+ G   +A K+ + +  + +V+ W +++ A   H N +  
Sbjct: 240 ASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTAR-NVISWTSMIAAYAQHGNPQEA 298

Query: 633 RLSAQHILDFEP 644
            L+    +D EP
Sbjct: 299 -LNLFKRMDVEP 309



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 189/414 (45%), Gaps = 24/414 (5%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N  ++A +L  C     L     IH ++L      D    + LLN+Y+K + + +A K
Sbjct: 108 EPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARK 167

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHR-EGHELNPFAFTAFLKVLVSMG 171
           +F+ M  RN  S+   I  Y  + +  EA+ LFS + + E  E N + F   L  +  +G
Sbjct: 168 VFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLG 227

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------------ 219
             E    V   +   G D+N  V  AL+  +  CG    ARKVFD +             
Sbjct: 228 NLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIA 287

Query: 220 ----NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
               +   +EALN F +M     +P+  +F+  L AC  L  +   +  H   ++  +  
Sbjct: 288 AYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEA-HLA 343

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
              +  +LL +Y + G + +ARR+F  M  +D    + MIA + Q      A+ ++ RM 
Sbjct: 344 SPQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRME 403

Query: 336 QAFVAPNQFTFVSVLQACA-TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
           Q  +  +  TFVSVL AC+ T    D  +   SLV+  G++  V     ++DV  + GR+
Sbjct: 404 QEGIPADGITFVSVLVACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRL 463

Query: 395 ENSVELFAESP-KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTY 447
            ++ EL    P + + V W T++ G  + G++ +      K+  E  PA  + Y
Sbjct: 464 GDAEELVETMPYQTDAVAWMTLLSGCKRHGDLNRGERAARKVF-ELAPAETLPY 516


>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
 gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
          Length = 710

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 234/714 (32%), Positives = 364/714 (50%), Gaps = 103/714 (14%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +S  +A  L  C++    + A ++H ++++   C ++F  N L++VY K   L  A K+F
Sbjct: 23  DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D M ER                                   N F+F + +  L+  G+ +
Sbjct: 83  DRMSER-----------------------------------NVFSFNSIISTLMRWGFVD 107

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMR 234
               +F+    L  + +     ++I  F+                +D FEEAL++F +M 
Sbjct: 108 ESAWLFS----LMPEKDQCSWNSMIAGFAQ---------------HDRFEEALDWFVRMH 148

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
              F  N+++F   L AC  L  +++    HG   K+ Y +D+++   L+D Y+K G + 
Sbjct: 149 RDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVG 208

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
            ARR+F+ M +K+V+ W+ +I  Y Q   +I+A+E F RM +    P++ T  SV+ ACA
Sbjct: 209 CARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACA 268

Query: 355 TMEGLDLGNQIHSLVVRVG-LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT-- 411
           T+     G QIH+ VV+     +D+ + NAL+D+YAKCGR+  +  +F   P RN V+  
Sbjct: 269 TLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSET 328

Query: 412 -----------------------------WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPA 442
                                        WN +I GY Q GE  +A+ +F  +  E V  
Sbjct: 329 TMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCP 388

Query: 443 TEVTYSSVLRACASLAALEPGMQVHCLTVKANY------DMDVVVANALIDMYAKCGSIT 496
           T  T+ ++L A A+LA LE G Q H   VK  +      + D+ V N+LIDMY KCGS+ 
Sbjct: 389 THYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVE 448

Query: 497 DARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS 556
           +   VF+ M + + VSWN MI GY+ +G   E L++F  M + G +P+++T +G L ACS
Sbjct: 449 EGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACS 508

Query: 557 NGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIW 616
           + GL+E+G  YF SM   +G+ P  +HYT MV LLGRAG L++A  LIE +P QP  ++W
Sbjct: 509 HAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVW 568

Query: 617 RALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-------- 668
            +LL AC +H N+ +G+  A+ I + +P     +VLL+N+Y+    W  A S        
Sbjct: 569 SSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMRRR 628

Query: 669 ---KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLS 719
              K+PG SWI+ Q  VH F   D  H     I  +L+ L    R+AGY+PD S
Sbjct: 629 GVVKQPGCSWIDIQSNVHVFMVKDKRHPQKKEIYSILKLLTKHMRQAGYVPDAS 682



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 133/438 (30%), Positives = 221/438 (50%), Gaps = 68/438 (15%)

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR 297
           F  ++  FA +L  C+ L + R A+S HG  ++T +  ++++   L+D+Y K G +  AR
Sbjct: 20  FFTDSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYAR 79

Query: 298 RIFEE-------------------------------MPKKDVIPWSFMIARYAQTDLSID 326
           ++F+                                MP+KD   W+ MIA +AQ D   +
Sbjct: 80  KVFDRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEE 139

Query: 327 AVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMD 386
           A++ F RM +     N ++F S L AC+ ++ L LG QIH L+ +     DVF+ + L+D
Sbjct: 140 ALDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLID 199

Query: 387 VYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVT 446
            Y+KCG +  +  +F    ++N V+WN +I  Y Q G   +A+  F +M E      EVT
Sbjct: 200 FYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVT 259

Query: 447 YSSVLRACASLAALEPGMQVHCLTVKAN-YDMDVVVANALIDMYAKCGSITDARLVFDMM 505
            +SV+ ACA+LAA + G+Q+H   VK++ +  D+++ NAL+DMYAKCG + +AR VFD M
Sbjct: 260 LASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRM 319

Query: 506 NDWNE-------------------------------VSWNAMISGYSMHGLSAEVLKVFD 534
              N                                VSWNA+I+GY+ +G + E L +F 
Sbjct: 320 PVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFR 379

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN-----YGIEPCIEHYTSMVS 589
           ++++    P + TF  +L+A +N   LE G      +V +      G EP I    S++ 
Sbjct: 380 MLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLID 439

Query: 590 LLGRAGHLDKAAKLIEGI 607
           +  + G +++  ++ E +
Sbjct: 440 MYMKCGSVEEGLRVFENM 457


>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
          Length = 606

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 216/523 (41%), Positives = 306/523 (58%), Gaps = 44/523 (8%)

Query: 296 ARRIFE--EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
           A++IFE  E  K +   W+  +   A+ D  IDA+ LF R+RQ  V P+ FT  SVL+AC
Sbjct: 79  AQQIFECVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRAC 138

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM------------------- 394
             +  L  G  +H +V +VG  S++++ N ++ +YA CG M                   
Sbjct: 139 LNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWN 198

Query: 395 ------------ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPA 442
                       E + +LF+  P+RN  +W +MI GYVQ G+  +A+ +F+KM E  V  
Sbjct: 199 IMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKC 258

Query: 443 TEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVF 502
            EVT  +VL ACA L AL+ GM++H  + +  +  +V ++N LIDMY KCG + +A  VF
Sbjct: 259 NEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVF 318

Query: 503 DMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLE 562
           + M +   VSW+AMI G +MHG + E L++F  M Q G  PN +TF+G+L ACS+ GL+ 
Sbjct: 319 EEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLIS 378

Query: 563 QGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           +G  +F SM  +YGI P IEHY  MV LL RAG L +A + I  +P +P+ ++W ALLGA
Sbjct: 379 EGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGA 438

Query: 623 CIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEP 671
           C +H NVE+   + +H+L+ +P ++  +V+LSNIYA A  WE  A            K P
Sbjct: 439 CRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTP 498

Query: 672 GLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKE 731
           G S I   G+VH F AG+ SH D   I    E L  + R  GY+P+ S VL D+ E EK 
Sbjct: 499 GWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKV 558

Query: 732 RYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKI 774
           +++  HSEKLAL F L   P  +PIRI+KNLRIC DCH+A +I
Sbjct: 559 KFVSRHSEKLALVFGLMNTPAETPIRIMKNLRICEDCHSAFQI 601



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 167/333 (50%), Gaps = 35/333 (10%)

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           +A+  F ++R     P+ FT + VL+ACL L  +   +  HG   K  +  +LY+   ++
Sbjct: 111 DAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIV 170

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIAR--------------------------- 317
            LY   GE+  AR +FE+MP++DV+ W+ MIA+                           
Sbjct: 171 HLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTS 230

Query: 318 ----YAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
               Y Q   + +A+ LF +M +A V  N+ T V+VL ACA +  LDLG +IH    R G
Sbjct: 231 MIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHG 290

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
              +V +SN L+D+Y KCG +E + ++F E  +R  V+W+ MI G    G   +A+ +FS
Sbjct: 291 FKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFS 350

Query: 434 KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAK 491
            M +  +    VT+  +L AC+ +  +  G +    ++  +Y +   + +   ++D+ ++
Sbjct: 351 DMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFA-SMTRDYGIIPQIEHYGCMVDLLSR 409

Query: 492 CGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
            G + +A   + +M    N V W A++    +H
Sbjct: 410 AGLLHEAHEFILNMPMKPNGVVWGALLGACRVH 442



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 85/373 (22%), Positives = 158/373 (42%), Gaps = 64/373 (17%)

Query: 46  PITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLN 105
           P TF+ S        + L++C+   DL     +H  V K G   +L+  N+++++Y    
Sbjct: 126 PDTFTCS--------SVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCG 177

Query: 106 RLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLK 165
            + +A  LF++MP+R+ +++   I           A  LFS +                 
Sbjct: 178 EMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMP---------------- 221

Query: 166 VLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEE 225
                                  + N    T++I  +  CG  +               E
Sbjct: 222 -----------------------ERNVRSWTSMIAGYVQCGKAK---------------E 243

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           A++ F++M   G K N  T   VL AC  L  + +    H  + +  ++ ++ ++  L+D
Sbjct: 244 AIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLID 303

Query: 286 LYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFT 345
           +Y K G +  A ++FEEM ++ V+ WS MI   A    + +A+ LF  M Q  + PN  T
Sbjct: 304 MYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVT 363

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVR-VGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           F+ +L AC+ M  +  G +  + + R  G++  +     ++D+ ++ G +  + E     
Sbjct: 364 FIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNM 423

Query: 405 P-KRNHVTWNTMI 416
           P K N V W  ++
Sbjct: 424 PMKPNGVVWGALL 436



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 26/258 (10%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +    L +C     L   M IH    + G   ++  +N L+++YVK   L +A K+F
Sbjct: 259 NEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVF 318

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           +EM ER  +S+   I G  +  +  EA+ LFS + + G E N   F   L     MG   
Sbjct: 319 EEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLIS 378

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGC-VEFARKVFDGLFNDCFEEALNFFSQM 233
                FA + +            +I      GC V+   +   GL ++  E  LN     
Sbjct: 379 EGRRFFASMTR---------DYGIIPQIEHYGCMVDLLSRA--GLLHEAHEFILN----- 422

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY---VAVALLDLYTKS 290
             +  KPN   +  +L AC     + +A+     A+K   E+D       V L ++Y ++
Sbjct: 423 --MPMKPNGVVWGALLGACRVHKNVEMAEE----AIKHLLELDPLNDGYYVVLSNIYAEA 476

Query: 291 GEISNARRIFEEMPKKDV 308
           G   +  R+ + M  + V
Sbjct: 477 GRWEDTARVRKFMKDRQV 494


>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 692

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 222/581 (38%), Positives = 315/581 (54%), Gaps = 18/581 (3%)

Query: 240 PNNFTFAFVLKACLGLD-TIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
           P++ TF   LK+   L   +R  +  H  +LK     + +V  +LL LY + G +  A+R
Sbjct: 115 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 174

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF---VAPNQFTFVSVLQACAT 355
           +F+EMP    + W+ +I  Y       +AV +    R AF   + P+ FT V VL ACA 
Sbjct: 175 VFDEMPHPSTVSWTALITAYMDAGDLREAVHV---ARNAFANGMRPDSFTAVRVLTACAR 231

Query: 356 MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTM 415
           +  L  G  +     + G+   VFV+ A +D+Y KCG M  + E+F +   ++ V W  M
Sbjct: 232 VADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAM 291

Query: 416 IVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY 475
           + GY   G   +A+ +F  M  E V       +  L AC  L AL+ G Q   +     +
Sbjct: 292 VGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEF 351

Query: 476 DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDL 535
             + V+  ALIDMYAKCGS  +A +VF  M   + + WNAMI G  M G       +   
Sbjct: 352 LDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQ 411

Query: 536 MQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAG 595
           M++ G + N+ TF+G+L +C++ GL++ G  YF +M   Y I P IEHY  +V LL RAG
Sbjct: 412 MEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAG 471

Query: 596 HLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSN 655
            L +A +LI+ +P   + +I  ALLG C IH N E+       ++  EP +   +V+LSN
Sbjct: 472 LLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSN 531

Query: 656 IYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEW 704
           IY+    WE AA            K P  SW+E +G VH FR GD SH   + I   L+ 
Sbjct: 532 IYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDE 591

Query: 705 LNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRI 764
           L ++ +  GY P    V+ DV ++EKE  L  HSEKLA+AF L    P   IR+ KNLR+
Sbjct: 592 LGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRV 651

Query: 765 CVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           C DCHTAIK+IS+I  REII+RD +RFH F+DG CSC D+W
Sbjct: 652 CSDCHTAIKLISRITHREIIVRDNNRFHCFRDGSCSCNDYW 692



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 194/414 (46%), Gaps = 24/414 (5%)

Query: 185 KLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDC----------------FEEALN 228
           KL   +N  V T+L+  ++ CG +  A++VFD + +                    EA++
Sbjct: 146 KLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVH 205

Query: 229 FFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYT 288
                 A G +P++FT   VL AC  +  +   ++    A +      ++VA A +DLY 
Sbjct: 206 VARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYV 265

Query: 289 KSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVS 348
           K GE++ AR +F++M  KD + W  M+  YA      +A++LF  M+   V P+ +    
Sbjct: 266 KCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAG 325

Query: 349 VLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRN 408
            L AC  +  LDLG Q   +V     L +  +  AL+D+YAKCG    +  +F +  K++
Sbjct: 326 ALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKD 385

Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ-VH 467
            + WN MI+G    G    A  +  +M +  V   + T+  +L +C     ++ G +  H
Sbjct: 386 IIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFH 445

Query: 468 CLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHGLS 526
            +T   +    +     ++D+ ++ G + +A +L+ DM    N V   A++ G  +H  +
Sbjct: 446 NMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIH-RN 504

Query: 527 AEVLK--VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           AE+ +  +  L++   W   N  +V + +  SN G  E   A  +  +   G+E
Sbjct: 505 AELAEHVLTQLIRLEPWNSGN--YVMLSNIYSNRGRWEDA-AKLRLDMKEKGVE 555



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 163/367 (44%), Gaps = 27/367 (7%)

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
           L+    +H + LK  +  +      LL +Y +   L  A ++FDEMP  +T+S+   I  
Sbjct: 134 LRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITA 193

Query: 132 YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC--PCVFACVYKLGHD 189
           Y  +    EAV +       G  + P +FTA   +      A+L     V+    + G  
Sbjct: 194 YMDAGDLREAVHVARNAFANG--MRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIA 251

Query: 190 SNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQM 233
            + FV TA +D +  CG +  AR+VFD +                 N    EAL+ F  M
Sbjct: 252 QSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAM 311

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
           +A G +P+ +  A  L AC  L  + + + A        +  +  +  AL+D+Y K G  
Sbjct: 312 QAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGST 371

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
           + A  +F++M KKD+I W+ MI     T     A  L  +M ++ V  N  TF+ +L +C
Sbjct: 372 AEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSC 431

Query: 354 ATMEGL--DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
            T  GL  D     H++     +   +     ++D+ ++ G ++ + +L  + P    + 
Sbjct: 432 -THTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMP----MP 486

Query: 412 WNTMIVG 418
            N +I+G
Sbjct: 487 ANAVILG 493



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 111/260 (42%), Gaps = 19/260 (7%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L +C +  DL T  T+     ++G    +F     +++YVK   +  A ++FD+M +++ 
Sbjct: 226 LTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDA 285

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +++   + GY  +    EA+ LF  +  EG   + +A    L     +G  +L       
Sbjct: 286 VAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRM 345

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GLFNDCFEE-A 226
           V       N  +GTALID ++ CG    A  VF                GL     E+ A
Sbjct: 346 VDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTA 405

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA--VALL 284
                QM   G K N+ TF  +L +C     I+  +  +   +   Y +   +     ++
Sbjct: 406 FTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRR-YFHNMTKLYHISPRIEHYGCIV 464

Query: 285 DLYTKSGEISNARRIFEEMP 304
           DL +++G +  A ++ ++MP
Sbjct: 465 DLLSRAGLLQEAHQLIDDMP 484


>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
          Length = 645

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 221/581 (38%), Positives = 316/581 (54%), Gaps = 18/581 (3%)

Query: 240 PNNFTFAFVLKACLGLD-TIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
           P++ T    LK+   L   +R  +  H  +LK     + +V  +LL LY K G +  A+R
Sbjct: 68  PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 127

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF---VAPNQFTFVSVLQACAT 355
           +F+EMP    +PW+ +I  Y       +AV +    R AF   + P+ FT V VL ACA 
Sbjct: 128 VFDEMPHPSTVPWTALITAYMDAGDLREAVHV---ARNAFANGMRPDSFTAVRVLTACAR 184

Query: 356 MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTM 415
           +  L  G  +     + G+   VFV+ A +D+Y KCG M  + E+F +   ++ V W  M
Sbjct: 185 IADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAM 244

Query: 416 IVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY 475
           + GY   G   +A+ +F  M  E +       +  L AC  L AL+ G Q   +     +
Sbjct: 245 VGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEF 304

Query: 476 DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDL 535
             + V+  ALIDMYAKCGS  +A +VF  M   + + WNAMI G  M G       +   
Sbjct: 305 LDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQ 364

Query: 536 MQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAG 595
           M++ G + N+ TF+G+L +C++ GL++ G  YF +M   Y I P IEHY  MV LL RAG
Sbjct: 365 MEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAG 424

Query: 596 HLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSN 655
            L +A +L++ +P   + +I  ALLG C IH N E+     + ++  EP +   +V+LSN
Sbjct: 425 LLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSN 484

Query: 656 IYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEW 704
           IY+    WE AA            K P  SW+E +G VH FR GD SH   + I   L+ 
Sbjct: 485 IYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDE 544

Query: 705 LNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRI 764
           L ++ +  GY P    V+ DV ++EKE  L  HSEKLA+AF L    P   IR+ KNLR+
Sbjct: 545 LGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRV 604

Query: 765 CVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           C DCHTAIK++S+I  REII+RD +RFH F+DG CSC D+W
Sbjct: 605 CSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 645



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 192/415 (46%), Gaps = 26/415 (6%)

Query: 185 KLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDC----------------FEEALN 228
           KL   +N  V T+L+  ++ CG +  A++VFD + +                    EA++
Sbjct: 99  KLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVH 158

Query: 229 FFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYT 288
                 A G +P++FT   VL AC  +  +   ++    A +      ++VA A +DLY 
Sbjct: 159 VARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYV 218

Query: 289 KSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVS 348
           K GE++ AR +F++M  KD + W  M+  YA      +A++LF  M+   + P+ +    
Sbjct: 219 KCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAG 278

Query: 349 VLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRN 408
            L AC  +  LDLG Q   +V     L +  +  AL+D+YAKCG    +  +F +  K++
Sbjct: 279 ALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKD 338

Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ-VH 467
            + WN MI+G    G    A  +  +M +  V   + T+  +L +C     ++ G +  H
Sbjct: 339 IIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFH 398

Query: 468 CLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH--- 523
            +T   +    +     ++D+ ++ G + +A +LV DM    N V   A++ G  +H   
Sbjct: 399 NMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNT 458

Query: 524 GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
            L+  VLK   L++   W   N  +V + +  SN G  E        M A  G+E
Sbjct: 459 ELAEHVLKQLILLEP--WNSGN--YVMLSNIYSNRGRWEDAAKLRLDMKAK-GVE 508



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 162/367 (44%), Gaps = 27/367 (7%)

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
           L+    +H + LK  +  +      LL++Y K   L  A ++FDEMP  +T+ +   I  
Sbjct: 87  LRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITA 146

Query: 132 YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC--PCVFACVYKLGHD 189
           Y  +    EAV +       G  + P +FTA   +      A+L     V+    + G  
Sbjct: 147 YMDAGDLREAVHVARNAFANG--MRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVA 204

Query: 190 SNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQM 233
            + FV TA +D +  CG +  AR+VFD +                 N    EAL+ F  M
Sbjct: 205 QSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAM 264

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
           +A G KP+ +  A  L AC  L  + + + A        +  +  +  AL+D+Y K G  
Sbjct: 265 QAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGST 324

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
             A  +F++M KKD+I W+ MI     T     A  L  +M ++ V  N  TF+ +L +C
Sbjct: 325 VEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSC 384

Query: 354 ATMEGL--DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
            T  GL  D     H++     +   +     ++D+ ++ G ++ + +L  + P    + 
Sbjct: 385 -THTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMP----MP 439

Query: 412 WNTMIVG 418
            N +I+G
Sbjct: 440 ANAVILG 446



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 111/260 (42%), Gaps = 19/260 (7%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L +C +  DL T  T+     ++G    +F     +++YVK   +  A ++FD+M  ++ 
Sbjct: 179 LTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDA 238

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +++   + GY  +    EA+ LF  +  EG + + +A    L     +G  +L       
Sbjct: 239 VAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRM 298

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GLFNDCFEE-A 226
           V       N  +GTALID ++ CG    A  VF                GL     E+ A
Sbjct: 299 VDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIA 358

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA--VALL 284
                QM   G K N+ TF  +L +C     I+  +  +   +   Y +   +     ++
Sbjct: 359 FALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRR-YFHNMTKLYHISPRIEHYGCMV 417

Query: 285 DLYTKSGEISNARRIFEEMP 304
           DL +++G +  A ++ ++MP
Sbjct: 418 DLLSRAGLLQEAHQLVDDMP 437


>gi|302821737|ref|XP_002992530.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
 gi|300139732|gb|EFJ06468.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
          Length = 849

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 245/753 (32%), Positives = 396/753 (52%), Gaps = 55/753 (7%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D    N ++  Y K   + DA  +F  +   N  S+   +  Y  +      + L   + 
Sbjct: 115 DRLLLNCVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMD 174

Query: 150 REGHELNPFAFTAFLKVLVSMG-WAEL--CPCVFACVYKLGHDSNAFVGTALIDAFSVCG 206
             G   N       +  +  +G W E        A   +L +D    + TALID ++ CG
Sbjct: 175 LLGVWPNAVTLATVIGAVSELGDWDEARKIHARAAATCQLTYD--VVLVTALIDMYAKCG 232

Query: 207 CVEFARKVFDGLFNDCFE----------------EALNFFSQMRAVGFKPNNFTFAFVLK 250
            +  A  VFD   N                    +A++ F++++  G +PN  T+A + +
Sbjct: 233 DIFHAEVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFR 292

Query: 251 ACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIP 310
           AC        A+ AH C + +    D+ V  AL+ +Y++ G + +ARR+F+ MP K+V+ 
Sbjct: 293 ACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNVVT 352

Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV 370
           W+ MIA YAQ   + +A++L+  M  A V P++ TFV+VL++C+  E L  G  IH  VV
Sbjct: 353 WNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHVV 412

Query: 371 RVGLLSDVFVSNALMDVYAKCGRMENSVELFAE--SPKRNHVTWNTMIVGYVQLGEVGKA 428
             G  S + V +AL+ +Y+ CG + ++V++F +  +   + ++W  M+    + GE   A
Sbjct: 413 DAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRSA 472

Query: 429 MIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDM 488
           + +F KM  E V A  VT+ S + AC+S+ AL  G  +    +   Y +DVV+  +LI++
Sbjct: 473 LALFRKMDLEGVKANVVTFVSTIDACSSIGALVEGHAIFERVIVTGYLIDVVLGTSLINL 532

Query: 489 YAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG---LSAEVLKVFDLMQQRGWRPNN 545
           Y KCG +  A  VF  ++  N V+WN +++  S +G   LSAE+L+  DL    G +PN 
Sbjct: 533 YGKCGRLDYALEVFHHLSFKNIVTWNTILAASSQNGEETLSAELLQEMDL---DGAQPNE 589

Query: 546 LTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
           +T + +L  CS+ GL+ +  +YF+SMV  + + P  EHY  +V LLGR+G L++    I 
Sbjct: 590 MTLLNMLFGCSHNGLVAKAVSYFRSMVYGHCLVPTSEHYGCLVDLLGRSGQLEEVEAFIS 649

Query: 606 GIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYA------- 658
             PF    ++W +LLG+C+IH++VE G  +A+ +L  +P++ + +VLLSN++A       
Sbjct: 650 SKPFSLDSVLWMSLLGSCVIHSDVERGLRAARRVLGLDPKNASPYVLLSNMFAAIGMLDA 709

Query: 659 ---MAR-SWEKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGY 714
              +A+ + E+A  KE   S+IE  G+VH F      H     I   L   + +  +AG+
Sbjct: 710 VKSLAKLAGERAMKKEQSRSYIEVNGVVHEFGVRAGLHRLGEKIGAQLREWSEEMEEAGF 769

Query: 715 IPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKI 774
           +P     L DVR          H EKLA+AF     PP  P+ ++KNLR+CV CH  IK 
Sbjct: 770 VP-----LHDVR--------GYHDEKLAIAFGAISSPPGVPLFVVKNLRMCVCCHGEIKH 816

Query: 775 ISKIVQREIIIRDVHRFHHFQ--DGCCSCGDFW 805
           I K+  R+I +R+ +R HHF+  D  CSCGD+W
Sbjct: 817 ICKMTGRDISVREGNRVHHFRPMDASCSCGDYW 849



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 18/213 (8%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE- 116
           ++   L+SC   + L     IH  V+  G    L   + L+ +Y     L DA  +F + 
Sbjct: 387 TFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKG 446

Query: 117 -MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAEL 175
                + IS+   +   T + +   A+ LF  +  EG + N   F + +    S+G    
Sbjct: 447 VTTHSSVISWTAMLTALTRNGEGRSALALFRKMDLEGVKANVVTFVSTIDACSSIGALVE 506

Query: 176 CPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-FNDCF----------- 223
              +F  V   G+  +  +GT+LI+ +  CG +++A +VF  L F +             
Sbjct: 507 GHAIFERVIVTGYLIDVVLGTSLINLYGKCGRLDYALEVFHHLSFKNIVTWNTILAASSQ 566

Query: 224 --EEALN--FFSQMRAVGFKPNNFTFAFVLKAC 252
             EE L+     +M   G +PN  T   +L  C
Sbjct: 567 NGEETLSAELLQEMDLDGAQPNEMTLLNMLFGC 599


>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
          Length = 798

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 248/724 (34%), Positives = 373/724 (51%), Gaps = 82/724 (11%)

Query: 95  NVLLNVYVKLNRLPDAT-KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGH 153
           N LL  Y + NRLPDA   LF  MP R+  S+   I G ++  Q +              
Sbjct: 52  NALLAGYFR-NRLPDAALGLFRRMPSRDLASYNALISGLSLRRQTL-------------- 96

Query: 154 ELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARK 213
              P A  A   +          P V +              T+L+  +           
Sbjct: 97  ---PDAAAALASI-------PFPPSVVSF-------------TSLLRGY----------- 122

Query: 214 VFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY 273
           V  GL  D    A+  F QM     + N+ ++  +L   L    +  A+           
Sbjct: 123 VRHGLLAD----AIRLFQQMP----ERNHVSYTVLLGGLLDAGRVNEARRL----FDEMP 170

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
           + D+    A+L  Y ++G I+ AR +F+EMPK++V+ W+ MI+ YAQ      A +LF  
Sbjct: 171 DRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEV 230

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           M +          V  +QA    +  +L N +            V   NA+M  + + G 
Sbjct: 231 MPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPE--------HPVAACNAMMVGFGQRGM 282

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           ++ +  +F +  +R+  TW+ MI  Y Q   + +A+  F +ML   V     +  S+L  
Sbjct: 283 VDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTV 342

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
           CA+LA L+ G +VH   ++ ++DMDV   +ALI MY KCG++  A+ VF      + V W
Sbjct: 343 CAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMW 402

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA 573
           N+MI+GY+ HGL  + L +F  M+  G  P+ +T++G L+ACS  G +++G   F SM  
Sbjct: 403 NSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTV 462

Query: 574 NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGR 633
           N  I P  EHY+ MV LLGR+G +++A  LI+ +P +P  +IW AL+GAC +H N EI  
Sbjct: 463 NSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAE 522

Query: 634 LSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMV 682
            +A+ +L+ EP +   +VLLS+IY     WE A+           +K PG SWIE    V
Sbjct: 523 FAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRV 582

Query: 683 HYFRAGDT-SHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKL 741
           H F +GD  +H +   I  +LE L+    ++GY  D S VL D+ E++K   L  HSE+ 
Sbjct: 583 HLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQ 642

Query: 742 ALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSC 801
           A+A+ L K+P   PIR++KNLR+C DCH+AIK+I+KI  REII+RD +RFHHF+DG CSC
Sbjct: 643 AVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIILRDANRFHHFKDGFCSC 702

Query: 802 GDFW 805
            D+W
Sbjct: 703 RDYW 706



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 163/345 (47%), Gaps = 26/345 (7%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D+ A   +L+ Y +  R+ +A  LFDEMP+RN +S+   I GY  + +   A  LF  + 
Sbjct: 173 DVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMP 232

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
               E N  ++TA L   +  G  E    +F  + +  H   A    A++  F   G V+
Sbjct: 233 ----ERNEVSWTAMLVGYIQAGHVEDAAELFNAMPE--HPVAAC--NAMMVGFGQRGMVD 284

Query: 210 FARKVF-------DGLF---------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL 253
            A+ VF       DG +         N+   EAL+ F +M   G +PN  +   +L  C 
Sbjct: 285 AAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCA 344

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSF 313
            L  +   +  H   L+  ++MD++   AL+ +Y K G +  A+R+F     KD++ W+ 
Sbjct: 345 ALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNS 404

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI-HSLVVRV 372
           MI  YAQ  L   A+ +F  MR A ++P+  T++  L AC+    +  G +I +S+ V  
Sbjct: 405 MITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNS 464

Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMI 416
            +       + ++D+  + G +E + +L    P + + V W  ++
Sbjct: 465 SIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALM 509



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 136/322 (42%), Gaps = 62/322 (19%)

Query: 288 TKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFV 347
            ++G I  AR  FE MP +    ++ ++A Y +  L   A+ LF RM    +A       
Sbjct: 28  ARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYN---- 83

Query: 348 SVLQACATMEGLDLGNQI----HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
                 A + GL L  Q      + +  +     V    +L+  Y + G + +++ LF +
Sbjct: 84  ------ALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQ 137

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
            P+RNHV++  ++ G +  G V +A  +F +M                            
Sbjct: 138 MPERNHVSYTVLLGGLLDAGRVNEARRLFDEM---------------------------- 169

Query: 464 MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMH 523
                       D DVV   A++  Y + G IT+AR +FD M   N VSW AMISGY+ +
Sbjct: 170 -----------PDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQN 218

Query: 524 GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEH 583
           G      K+F++M +R    N +++  +L      G +E     F +M   + +  C   
Sbjct: 219 GEVNLARKLFEVMPER----NEVSWTAMLVGYIQAGHVEDAAELFNAM-PEHPVAAC--- 270

Query: 584 YTSMVSLLGRAGHLDKAAKLIE 605
             +M+   G+ G +D A  + E
Sbjct: 271 -NAMMVGFGQRGMVDAAKTVFE 291



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 110/259 (42%), Gaps = 42/259 (16%)

Query: 382 NALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKM------ 435
           NA +   A+ G +E +   F   P R   ++N ++ GY +      A+ +F +M      
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80

Query: 436 ----------LEEQV-------------PATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
                     L  Q              P + V+++S+LR       L   +++     +
Sbjct: 81  SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
            N+    V+   L+D     G + +AR +FD M D + V+W AM+SGY   G   E   +
Sbjct: 141 RNHVSYTVLLGGLLD----AGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARAL 196

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
           FD M +R    N +++  ++S  +  G +      F+ M     +      +T+M+    
Sbjct: 197 FDEMPKR----NVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVS-----WTAMLVGYI 247

Query: 593 RAGHLDKAAKLIEGIPFQP 611
           +AGH++ AA+L   +P  P
Sbjct: 248 QAGHVEDAAELFNAMPEHP 266



 Score = 44.7 bits (104), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 14/166 (8%)

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
           NA I   A+ G+I  AR  F+ M      S+NA+++GY  + L    L +F  M  R   
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
             N    G+        L  Q      + +A+    P +  +TS++    R G L  A +
Sbjct: 81  SYNALISGL-------SLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIR 133

Query: 603 LIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS-AQHILDFEPEDE 647
           L + +P +  V  +  LLG  +     + GR++ A+ + D  P+ +
Sbjct: 134 LFQQMPERNHVS-YTVLLGGLL-----DAGRVNEARRLFDEMPDRD 173



 Score = 40.0 bits (92), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 23/98 (23%), Positives = 44/98 (44%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  S  + L  C     L     +H  +L+    +D+FA + L+ +Y+K   L  A ++F
Sbjct: 332 NYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVF 391

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREG 152
                ++ + + + I GY       +A+G+F  +   G
Sbjct: 392 HTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAG 429


>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 624

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 210/560 (37%), Positives = 313/560 (55%), Gaps = 42/560 (7%)

Query: 288 TKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFV 347
           +KSG+++ A  +F+++P  D   ++ +   Y +  L+ + + ++ RM    V+PN+FT+ 
Sbjct: 65  SKSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYP 124

Query: 348 SVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVY------------------- 388
            +++AC     ++ G QIH+ V++ G  +D F  N L+ +Y                   
Sbjct: 125 PLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQR 184

Query: 389 ------------AKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML 436
                       ++ G ++ + E+F   P+RN V+WN MI  YVQ   + +A  +F +M 
Sbjct: 185 DVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMR 244

Query: 437 EEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSIT 496
            E V   +   +S+L AC  L ALE G  +H    K+  ++D  +A  +IDMY KCG + 
Sbjct: 245 LENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLE 304

Query: 497 DARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS 556
            A  VF+ +      SWN MI G +MHG     +++F  M++    P+ +TFV VLSAC+
Sbjct: 305 KASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACA 364

Query: 557 NGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIW 616
           + GL+E+G+ YF+ M    G++P +EH+  MV LLGRAG L++A KLI  +P  P   + 
Sbjct: 365 HSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVL 424

Query: 617 RALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA--------- 667
            AL+GAC IH N E+G    + +++ EP +   +VLL+N+YA A  WE  A         
Sbjct: 425 GALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDR 484

Query: 668 --SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDV 725
              K PG S IE++  V  F AG  +H     I   L+ +    R  GY+PD   VL D+
Sbjct: 485 GVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDI 544

Query: 726 REDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIII 785
            E+EKE  L+ HSEKLA+AF L K  P   +RI KNLRIC DCH A K+ISK+  REIII
Sbjct: 545 DEEEKENPLYYHSEKLAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIII 604

Query: 786 RDVHRFHHFQDGCCSCGDFW 805
           RD +RFHHF+ G CSC D+W
Sbjct: 605 RDRNRFHHFRMGGCSCKDYW 624



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/388 (25%), Positives = 170/388 (43%), Gaps = 49/388 (12%)

Query: 186 LGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCFEEALNF--------- 229
           L  D++A        A S  G + +A +VFD +       +N  F   L +         
Sbjct: 48  LSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFM 107

Query: 230 FSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK 289
           +S+M      PN FT+  +++AC     I   K  H   LK  +  D +    L+ +Y  
Sbjct: 108 YSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVN 167

Query: 290 SGEISNARRIFEEMPKKDVIPWS-------------------------------FMIARY 318
              +  ARR+F+ MP++DV+ W+                                MIA Y
Sbjct: 168 FQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAY 227

Query: 319 AQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDV 378
            Q++   +A  LF RMR   V  ++F   S+L AC  +  L+ G  IH  + + G+  D 
Sbjct: 228 VQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDS 287

Query: 379 FVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE 438
            ++  ++D+Y KCG +E + E+F E P++   +WN MI G    G+   A+ +F +M  E
Sbjct: 288 KLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMERE 347

Query: 439 QVPATEVTYSSVLRACASLAALEPGMQ-VHCLTVKANYDMDVVVANALIDMYAKCGSITD 497
            V    +T+ +VL ACA    +E G      +T        +     ++D+  + G + +
Sbjct: 348 MVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEE 407

Query: 498 AR-LVFDMMNDWNEVSWNAMISGYSMHG 524
           AR L+ +M  + +     A++    +HG
Sbjct: 408 ARKLINEMPVNPDAGVLGALVGACRIHG 435



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 149/314 (47%), Gaps = 38/314 (12%)

Query: 350 LQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYA--KCGRMENSVELFAESPKR 407
           L +C+TM  L    Q HS ++R+GL +D      ++   A  K G +  ++E+F + P  
Sbjct: 27  LDSCSTMAEL---KQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHP 83

Query: 408 NHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVH 467
           +   +NT+  GY++       + M+S+ML + V   + TY  ++RAC    A+E G Q+H
Sbjct: 84  DAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIH 143

Query: 468 CLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSA 527
              +K  +  D    N LI MY    S+  AR VFD M   + VSW ++I+GYS  G   
Sbjct: 144 AHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVD 203

Query: 528 EVLKVFDLMQQR---GW-----------------------RPNNLTF-----VGVLSACS 556
           +  +VF+LM +R    W                       R  N+         +LSAC+
Sbjct: 204 KAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACT 263

Query: 557 NGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIW 616
             G LEQG+ +    +   GIE   +  T+++ +  + G L+KA+++   +P Q  +  W
Sbjct: 264 GLGALEQGK-WIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELP-QKGISSW 321

Query: 617 RALLGACIIHNNVE 630
             ++G   +H   E
Sbjct: 322 NCMIGGLAMHGKGE 335



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 91/395 (23%), Positives = 150/395 (37%), Gaps = 93/395 (23%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +Y   +++C  +  ++    IH  VLK G   D F+ N L+++YV    L  A ++F
Sbjct: 119 NKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVF 178

Query: 115 DEMPERNTISFVTTIQGYT-------------------------------VSSQFVEAVG 143
           D MP+R+ +S+ + I GY+                                S++  EA  
Sbjct: 179 DNMPQRDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFA 238

Query: 144 LFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFS 203
           LF  +  E   L+ F   + L     +G  E    +   + K G + ++ + T +ID + 
Sbjct: 239 LFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYC 298

Query: 204 VCGCVEFARKVFDGLFN------DCF----------EEALNFFSQMRAVGFKPNNFTFAF 247
            CGC+E A +VF+ L        +C           E A+  F +M      P+  TF  
Sbjct: 299 KCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVN 358

Query: 248 VLKACLGLDTIRVAKS-----AHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEE 302
           VL AC     +   K           LK   E        ++DL  ++G +  AR++  E
Sbjct: 359 VLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEH----FGCMVDLLGRAGLLEEARKLINE 414

Query: 303 MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG 362
           MP                                  V P+     +++ AC      +LG
Sbjct: 415 MP----------------------------------VNPDAGVLGALVGACRIHGNTELG 440

Query: 363 NQIHSLVVRVGLL-SDVFVSNALMDVYAKCGRMEN 396
            QI   V+ +    S  +V   L ++YA  GR E+
Sbjct: 441 EQIGKKVIELEPHNSGRYV--LLANLYASAGRWED 473


>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
 gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
          Length = 539

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 210/538 (39%), Positives = 301/538 (55%), Gaps = 64/538 (11%)

Query: 332 CRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC 391
           C++    + P+  + V+VL ACA+M     G  +H + VR G   D+FV NAL+D+YAKC
Sbjct: 2   CKLGDIDMRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKC 61

Query: 392 GRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSV- 450
           G ++ + ++F    +++ V+WN M+ GY Q+G    A+ +F KM EE +    V++S+V 
Sbjct: 62  GMVDEASKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVI 121

Query: 451 ---------------------------------------------------LRACASLAA 459
                                                              L ACA LAA
Sbjct: 122 AAFAQRGLGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAA 181

Query: 460 LEPGMQVHCLTVKANYDMDVV-VANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           L  G Q+H   ++ ++D   + VAN LIDMYAK G I  AR VFD +   N VSW ++++
Sbjct: 182 LRLGRQIHAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMT 241

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           GY MHG   E L+VFD M++ G +P+ +T + VL ACS+ G+++QG  +F SM   +G+ 
Sbjct: 242 GYGMHGRGKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVI 301

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P  EHY  MV LLGRAG L++A +LIEG+  +PS ++W ALL  C IH NVE+G  +A+ 
Sbjct: 302 PGQEHYACMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQ 361

Query: 639 ILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRA 687
           +L+   E++ ++ LLSNIYA AR W+  A            K PG SW++ +     F  
Sbjct: 362 LLELNSENDGSYTLLSNIYANARRWKDVARVRSLMKNSGIRKRPGCSWVQGKKGTTTFYV 421

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFAL 747
            D +H     I  +L  L  + +  GY+P+ S  L DV ++EK   L+ HSEKLALA+ +
Sbjct: 422 ADKTHPQSKQIYEILRSLTQRIKVLGYVPETSFALHDVDDEEKVDLLFEHSEKLALAYGI 481

Query: 748 FKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
               P +PIRI KNLR+C DCH AI  IS I+  EII+RD  RFHHF+ G CSC  +W
Sbjct: 482 LISAPGAPIRITKNLRVCGDCHNAITYISMIIDHEIILRDSSRFHHFKKGSCSCSGYW 539



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 170/356 (47%), Gaps = 41/356 (11%)

Query: 77  TIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSS 136
            +H   ++ G+  DLF  N L+++Y K   + +A+K+FD + E++ +S+   + GY+   
Sbjct: 34  AVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEASKVFDRIKEKDVVSWNAMVNGYSQIG 93

Query: 137 QFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGT 196
           +F +A+GLF  +  E  ELN  +++A +      G                      +G 
Sbjct: 94  RFEDALGLFEKMREENIELNVVSWSAVIAAFAQRG----------------------LGC 131

Query: 197 ALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLD 256
             +D F         R++  G  ND  E     F Q   V  KPN FT +  L AC  L 
Sbjct: 132 ETLDVF---------REMQHGEANDALELFSWMFKQDGLV--KPNCFTISCALIACARLA 180

Query: 257 TIRVAKSAHGCALKTCYEMD-LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMI 315
            +R+ +  H   L+  ++   LYVA  L+D+Y KSG+I  AR +F+ + +K+ + W+ ++
Sbjct: 181 ALRLGRQIHAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLM 240

Query: 316 ARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ-IHSLVVRVGL 374
             Y       +A+E+F  MR+  + P+  T + VL AC+    +D G +  +S+    G+
Sbjct: 241 TGYGMHGRGKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGV 300

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELF-AESPKRNHVTWNTMIVG-----YVQLGE 424
           +        ++D+  + GR+  ++EL      + + + W  ++ G      V+LGE
Sbjct: 301 IPGQEHYACMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGE 356



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/346 (25%), Positives = 156/346 (45%), Gaps = 61/346 (17%)

Query: 236 VGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISN 295
           +  +P+  +   VL AC  +      K+ HG A+++    DL+V  AL+D+Y K G +  
Sbjct: 7   IDMRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDE 66

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ------------------- 336
           A ++F+ + +KDV+ W+ M+  Y+Q     DA+ LF +MR+                   
Sbjct: 67  ASKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQ 126

Query: 337 ---------------------------------AFVAPNQFTFVSVLQACATMEGLDLGN 363
                                              V PN FT    L ACA +  L LG 
Sbjct: 127 RGLGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGR 186

Query: 364 QIHSLVVRVGLLSD-VFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
           QIH+ ++R    S  ++V+N L+D+YAK G ++ +  +F    ++N V+W +++ GY   
Sbjct: 187 QIHAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMH 246

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
           G   +A+ +F +M    +    VT   VL AC+    ++ G++      K   +  V+  
Sbjct: 247 GRGKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSK---EFGVIPG 303

Query: 483 NA----LIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
                 ++D+  + G + +A  L+  M  + + + W A++SG  +H
Sbjct: 304 QEHYACMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIH 349


>gi|115451769|ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group]
 gi|108707037|gb|ABF94832.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113547956|dbj|BAF11399.1| Os03g0235200 [Oryza sativa Japonica Group]
 gi|125585525|gb|EAZ26189.1| hypothetical protein OsJ_10058 [Oryza sativa Japonica Group]
 gi|215706461|dbj|BAG93317.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 641

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 212/531 (39%), Positives = 316/531 (59%), Gaps = 18/531 (3%)

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV---APNQFTFVSV 349
           + +AR +F+ MP++D   WS +++ Y +      A+ L+ RM++      A N+FT  S 
Sbjct: 111 LPSARELFDRMPQRDHFAWSALVSGYTRHGQPEAALALYRRMQEEPGNDGADNEFTASSA 170

Query: 350 LQACATMEGLDLGNQIHSLVVRVGLLS---DVFVSNALMDVYAKCGRMENSVELFAESPK 406
           L A A       G ++H  VVR G+ +   D  + +AL D+YAKCGR++++  +F   P 
Sbjct: 171 LAAAAAARCGRAGRELHCHVVRRGIDAAGGDAVLWSALADMYAKCGRVDDARRVFDRMPV 230

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ-VPATEVTYSSVLRACASLAALEPGMQ 465
           R+ V+W  M+  Y   G  G+   +F  ML  + V   E TY+ VLRACA  A    G Q
Sbjct: 231 RDAVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNEFTYAGVLRACAQFAVESFGRQ 290

Query: 466 VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGL 525
           VH    K+         +AL+ MY+KCG +  A  VF+ M   + VSW A+ISGY+ +G 
Sbjct: 291 VHGRMAKSGTGDSCFAESALLRMYSKCGDMGSAVRVFEAMAKPDLVSWTAVISGYAQNGQ 350

Query: 526 SAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYT 585
             E L+ FD+  + G +P+++TFVGVLSAC++ GL+++G   F S+   Y IE   +HY 
Sbjct: 351 PEEALRYFDMFLRSGIKPDHVTFVGVLSACAHAGLVDKGLEIFHSIKEQYCIEHTADHYA 410

Query: 586 SMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPE 645
            ++ LL R+G  ++A K+I  +  +P+  +W +LLG C IH NV + R +A+ + + EPE
Sbjct: 411 CVIDLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGGCRIHKNVGLARRAAEALFEIEPE 470

Query: 646 DEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHAD 694
           + AT+V L+NIYA    ++           K  +K P  SWIE    VH F  GD SH  
Sbjct: 471 NPATYVTLANIYASVGLFDEVEDVRRIMESKGITKMPASSWIEVGRRVHVFLVGDKSHPK 530

Query: 695 MNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSS 754
            + I  +L+ L +K  + GY+ D+  VL DV +++KE+ +  HSE+LA+AF +   P  S
Sbjct: 531 ADEIYALLKKLYVKMVEEGYVADIEFVLHDVEDEQKEQDIGYHSERLAVAFGIIATPEGS 590

Query: 755 PIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           PI++ KNLRIC DCH AIK+IS+IVQR+II+RD +RFHHF+DG CSC D+W
Sbjct: 591 PIKVFKNLRICGDCHAAIKLISQIVQRDIIVRDSNRFHHFKDGICSCRDYW 641



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 109/391 (27%), Positives = 183/391 (46%), Gaps = 32/391 (8%)

Query: 90  DLFATNVLLNVYVKLNR-LPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTL 148
           D+ + N L++   +  R LP A +LFD MP+R+  ++   + GYT   Q   A+ L+  +
Sbjct: 93  DICSHNTLISALSRSPRHLPSARELFDRMPQRDHFAWSALVSGYTRHGQPEAALALYRRM 152

Query: 149 HRE-GHELNPFAFTAFLKVLVSM-------GWAELCPCVFACVYKLGHDSNAFVGTALID 200
             E G++     FTA   +  +        G    C  V   +   G D  A + +AL D
Sbjct: 153 QEEPGNDGADNEFTASSALAAAAAARCGRAGRELHCHVVRRGIDAAGGD--AVLWSALAD 210

Query: 201 AFSVCGCVEFARKVFD-----------GLFNDCFE-----EALNFFSQM-RAVGFKPNNF 243
            ++ CG V+ AR+VFD            +    F+     E    F  M R  G +PN F
Sbjct: 211 MYAKCGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNEF 270

Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
           T+A VL+AC         +  HG   K+      +   ALL +Y+K G++ +A R+FE M
Sbjct: 271 TYAGVLRACAQFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCGDMGSAVRVFEAM 330

Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
            K D++ W+ +I+ YAQ     +A+  F    ++ + P+  TFV VL ACA    +D G 
Sbjct: 331 AKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSACAHAGLVDKGL 390

Query: 364 QI-HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE-SPKRNHVTWNTMIVGYVQ 421
           +I HS+  +  +         ++D+ ++ G+ E + ++    + K N   W +++ G   
Sbjct: 391 EIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGGCRI 450

Query: 422 LGEVGKAMIMFSKM--LEEQVPATEVTYSSV 450
              VG A      +  +E + PAT VT +++
Sbjct: 451 HKNVGLARRAAEALFEIEPENPATYVTLANI 481



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 101/253 (39%), Gaps = 27/253 (10%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  +YA  L++C Q         +H ++ K G     FA + LL +Y K   +  A ++F
Sbjct: 268 NEFTYAGVLRACAQFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCGDMGSAVRVF 327

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           + M + + +S+   I GY  + Q  EA+  F    R G + +   F   L      G  +
Sbjct: 328 EAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSACAHAGLVD 387

Query: 175 LCPCVFACV---YKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFS 231
               +F  +   Y + H ++ +    +ID  S  G  E A K+   +             
Sbjct: 388 KGLEIFHSIKEQYCIEHTADHY--ACVIDLLSRSGQFERAEKMIGNM------------- 432

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
                  KPN F +A +L  C     + +A+ A   AL      +    V L ++Y   G
Sbjct: 433 -----AVKPNKFLWASLLGGCRIHKNVGLARRA-AEALFEIEPENPATYVTLANIYASVG 486

Query: 292 ---EISNARRIFE 301
              E+ + RRI E
Sbjct: 487 LFDEVEDVRRIME 499


>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
 gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
 gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
          Length = 645

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 222/581 (38%), Positives = 315/581 (54%), Gaps = 18/581 (3%)

Query: 240 PNNFTFAFVLKACLGLD-TIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
           P++ TF   LK+   L   +R  +  H  +LK     + +V  +LL LY + G +  A+R
Sbjct: 68  PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 127

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF---VAPNQFTFVSVLQACAT 355
           +F+EMP    + W+ +I  Y       +AV +    R AF   + P+ FT V VL ACA 
Sbjct: 128 VFDEMPHPSTVSWTALITAYMDAGDLREAVHV---ARNAFANGMRPDSFTAVRVLTACAR 184

Query: 356 MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTM 415
           +  L  G  +     + G+   VFV+ A +D+Y KCG M  + E+F +   ++ V W  M
Sbjct: 185 VADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAM 244

Query: 416 IVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY 475
           + GY   G   +A+ +F  M  E V       +  L AC  L AL+ G Q   +     +
Sbjct: 245 VGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEF 304

Query: 476 DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDL 535
             + V+  ALIDMYAKCGS  +A +VF  M   + + WNAMI G  M G       +   
Sbjct: 305 LDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQ 364

Query: 536 MQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAG 595
           M++ G + N+ TF+G+L +C++ GL++ G  YF +M   Y I P IEHY  +V LL RAG
Sbjct: 365 MEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAG 424

Query: 596 HLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSN 655
            L +A +LI+ +P   + +I  ALLG C IH N E+       ++  EP +   +V+LSN
Sbjct: 425 LLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSN 484

Query: 656 IYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEW 704
           IY+    WE AA            K P  SW+E +G VH FR GD SH   + I   L+ 
Sbjct: 485 IYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDE 544

Query: 705 LNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRI 764
           L ++ +  GY P    V+ DV ++EKE  L  HSEKLA+AF L    P   IR+ KNLR+
Sbjct: 545 LGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRV 604

Query: 765 CVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           C DCHTAIK+IS+I  REII+RD +RFH F+DG CSC D+W
Sbjct: 605 CSDCHTAIKLISRITHREIIVRDNNRFHCFRDGSCSCNDYW 645



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 194/414 (46%), Gaps = 24/414 (5%)

Query: 185 KLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDC----------------FEEALN 228
           KL   +N  V T+L+  ++ CG +  A++VFD + +                    EA++
Sbjct: 99  KLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVH 158

Query: 229 FFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYT 288
                 A G +P++FT   VL AC  +  +   ++    A +      ++VA A +DLY 
Sbjct: 159 VARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYV 218

Query: 289 KSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVS 348
           K GE++ AR +F++M  KD + W  M+  YA      +A++LF  M+   V P+ +    
Sbjct: 219 KCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAG 278

Query: 349 VLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRN 408
            L AC  +  LDLG Q   +V     L +  +  AL+D+YAKCG    +  +F +  K++
Sbjct: 279 ALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKD 338

Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ-VH 467
            + WN MI+G    G    A  +  +M +  V   + T+  +L +C     ++ G +  H
Sbjct: 339 IIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFH 398

Query: 468 CLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHGLS 526
            +T   +    +     ++D+ ++ G + +A +L+ DM    N V   A++ G  +H  +
Sbjct: 399 NMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIH-RN 457

Query: 527 AEVLK--VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           AE+ +  +  L++   W   N  +V + +  SN G  E   A  +  +   G+E
Sbjct: 458 AELAEHVLTQLIRLEPWNSGN--YVMLSNIYSNRGRWEDA-AKLRLDMKEKGVE 508



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 163/367 (44%), Gaps = 27/367 (7%)

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
           L+    +H + LK  +  +      LL +Y +   L  A ++FDEMP  +T+S+   I  
Sbjct: 87  LRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITA 146

Query: 132 YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC--PCVFACVYKLGHD 189
           Y  +    EAV +       G  + P +FTA   +      A+L     V+    + G  
Sbjct: 147 YMDAGDLREAVHVARNAFANG--MRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIA 204

Query: 190 SNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQM 233
            + FV TA +D +  CG +  AR+VFD +                 N    EAL+ F  M
Sbjct: 205 QSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAM 264

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
           +A G +P+ +  A  L AC  L  + + + A        +  +  +  AL+D+Y K G  
Sbjct: 265 QAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGST 324

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
           + A  +F++M KKD+I W+ MI     T     A  L  +M ++ V  N  TF+ +L +C
Sbjct: 325 AEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSC 384

Query: 354 ATMEGL--DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
            T  GL  D     H++     +   +     ++D+ ++ G ++ + +L  + P    + 
Sbjct: 385 -THTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMP----MP 439

Query: 412 WNTMIVG 418
            N +I+G
Sbjct: 440 ANAVILG 446



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 111/260 (42%), Gaps = 19/260 (7%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           L +C +  DL T  T+     ++G    +F     +++YVK   +  A ++FD+M +++ 
Sbjct: 179 LTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDA 238

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
           +++   + GY  +    EA+ LF  +  EG   + +A    L     +G  +L       
Sbjct: 239 VAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRM 298

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GLFNDCFEE-A 226
           V       N  +GTALID ++ CG    A  VF                GL     E+ A
Sbjct: 299 VDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTA 358

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA--VALL 284
                QM   G K N+ TF  +L +C     I+  +  +   +   Y +   +     ++
Sbjct: 359 FTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRR-YFHNMTKLYHISPRIEHYGCIV 417

Query: 285 DLYTKSGEISNARRIFEEMP 304
           DL +++G +  A ++ ++MP
Sbjct: 418 DLLSRAGLLQEAHQLIDDMP 437


>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Glycine max]
          Length = 721

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 220/625 (35%), Positives = 338/625 (54%), Gaps = 43/625 (6%)

Query: 224 EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALK-TCYEMDLYVAVA 282
           E  L+ +  +R  GF  + F+F  +LKA   L  + +    HG A K   +  D ++  A
Sbjct: 97  ENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSALNLGLEIHGLASKFGFFHADPFIQSA 156

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+ +Y   G I +AR +F++M  +DV+ W+ MI  Y+Q       ++L+  M+ +   P+
Sbjct: 157 LIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPD 216

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
                +VL ACA    L  G  IH  +   G      +  +L+++YA CG M  + E++ 
Sbjct: 217 AIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYD 276

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE------------------------ 438
           + P ++ V    M+ GY +LG V  A  +F +M+E+                        
Sbjct: 277 QLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQL 336

Query: 439 -------QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAK 491
                  ++   ++T  SV+ ACA++ AL     +H    K  +   + + NALIDMYAK
Sbjct: 337 FNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAK 396

Query: 492 CGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGV 551
           CG++  AR VF+ M   N +SW++MI+ ++MHG +   + +F  M+++   PN +TF+GV
Sbjct: 397 CGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGV 456

Query: 552 LSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQP 611
           L ACS+ GL+E+G+ +F SM+  + I P  EHY  MV L  RA HL KA +LIE +PF P
Sbjct: 457 LYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFPP 516

Query: 612 SVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE------- 664
           +V+IW +L+ AC  H  +E+G  +A  +L+ EP+ +   V+LSNIYA  + W+       
Sbjct: 517 NVIIWGSLMSACQNHGEIELGEFAATRLLELEPDHDGALVVLSNIYAKEKRWDDVGLVRK 576

Query: 665 ----KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSA 720
               K  SKE   S IE    VH F   D  H   + I   L+ +  + +  GY P  S 
Sbjct: 577 LMKHKGVSKEKACSRIEVNNEVHVFMMADRYHKQSDEIYKKLDAVVSQLKLVGYTPSTSG 636

Query: 721 VLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQ 780
           +L D+ E+EK+  +  HSEKLAL + L      S IRI+KNLRIC DCH+ +K++SK+ +
Sbjct: 637 ILVDLEEEEKKEVVLWHSEKLALCYGLIGERKESCIRIVKNLRICEDCHSFMKLVSKVHR 696

Query: 781 REIIIRDVHRFHHFQDGCCSCGDFW 805
            EI++RD  RFHHF  G CSC D+W
Sbjct: 697 IEIVMRDRTRFHHFNGGICSCRDYW 721



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/504 (22%), Positives = 218/504 (43%), Gaps = 81/504 (16%)

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A  LF  +P   T      ++ ++        + L+  L R G  L+ F+F   LK +  
Sbjct: 68  ALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSK 127

Query: 170 MGWAELCPCVFACVYKLGH-DSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------- 219
           +    L   +     K G   ++ F+ +ALI  ++ CG +  AR +FD +          
Sbjct: 128 LSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNI 187

Query: 220 -------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC 272
                  N  ++  L  + +M+  G +P+      VL AC     +   K+ H       
Sbjct: 188 MIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNG 247

Query: 273 YEMDLYVAVALLDLYTKSGEISNARRIFEEMP---------------------------- 304
           + +  ++  +L+++Y   G +  AR +++++P                            
Sbjct: 248 FRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFD 307

Query: 305 ---KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL 361
              +KD++ WS MI+ YA++   ++A++LF  M++  + P+Q T +SV+ ACA +  L  
Sbjct: 308 RMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQ 367

Query: 362 GNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQ 421
              IH+   + G    + ++NAL+D+YAKCG +  + E+F   P++N ++W++MI  +  
Sbjct: 368 AKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAM 427

Query: 422 LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVV 481
            G+   A+ +F +M E+ +    VT+  VL AC+    +E G +     +  +       
Sbjct: 428 HGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEH------- 480

Query: 482 ANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW 541
                        I+  R  +  M D              ++  +  + K  +L++   +
Sbjct: 481 ------------RISPQREHYGCMVD--------------LYCRANHLRKAMELIETMPF 514

Query: 542 RPNNLTFVGVLSACSNGGLLEQGE 565
            PN + +  ++SAC N G +E GE
Sbjct: 515 PPNVIIWGSLMSACQNHGEIELGE 538



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 112/465 (24%), Positives = 193/465 (41%), Gaps = 85/465 (18%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D F  + L+ +Y    R+ DA  LFD+M  R+ +++   I GY+ ++ +   + L+  + 
Sbjct: 150 DPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMK 209

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
             G E +       L      G       +   +   G    + + T+L++ ++ CG + 
Sbjct: 210 TSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMH 269

Query: 210 FARKVFD--------------------GLFND--------------CFE----------- 224
            AR+V+D                    G+  D              C+            
Sbjct: 270 LAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQ 329

Query: 225 --EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
             EAL  F++M+     P+  T   V+ AC  +  +  AK  H  A K  +   L +  A
Sbjct: 330 PLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNA 389

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+D+Y K G +  AR +FE MP+K+VI WS MI  +A    +  A+ LF RM++  + PN
Sbjct: 390 LIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPN 449

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
             TF+ VL AC+    ++ G +  S ++                        E+ +    
Sbjct: 450 GVTFIGVLYACSHAGLVEEGQKFFSSMIN-----------------------EHRI---- 482

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
            SP+R H  +  M+  Y +   + KAM +   M     P   + + S++ AC +   +E 
Sbjct: 483 -SPQREH--YGCMVDLYCRANHLRKAMELIETM---PFPPNVIIWGSLMSACQNHGEIEL 536

Query: 463 G--MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMM 505
           G       L ++ ++D  +VV   L ++YAK     D  LV  +M
Sbjct: 537 GEFAATRLLELEPDHDGALVV---LSNIYAKEKRWDDVGLVRKLM 578



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/262 (22%), Positives = 110/262 (41%), Gaps = 22/262 (8%)

Query: 75  AMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTV 134
           AM +  +V  +     +  +  +L+ Y KL  + DA  +FD M E++ + +   I GY  
Sbjct: 267 AMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAE 326

Query: 135 SSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFV 194
           S Q +EA+ LF+ + R     +     + +    ++G       +     K G      +
Sbjct: 327 SYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPI 386

Query: 195 GTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGF 238
             ALID ++ CG +  AR+VF+ +                 +   + A+  F +M+    
Sbjct: 387 NNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNI 446

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCAL---KTCYEMDLYVAVALLDLYTKSGEISN 295
           +PN  TF  VL AC     +   +      +   +   + + Y    ++DLY ++  +  
Sbjct: 447 EPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHY--GCMVDLYCRANHLRK 504

Query: 296 ARRIFEEMP-KKDVIPWSFMIA 316
           A  + E MP   +VI W  +++
Sbjct: 505 AMELIETMPFPPNVIIWGSLMS 526



 Score = 47.8 bits (112), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 46/112 (41%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           + +C     L  A  IH    K G    L   N L+++Y K   L  A ++F+ MP +N 
Sbjct: 356 ISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNV 415

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           IS+ + I  + +      A+ LF  +  +  E N   F   L      G  E
Sbjct: 416 ISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVE 467


>gi|359481819|ref|XP_002283419.2| PREDICTED: MATE efflux family protein 1 [Vitis vinifera]
          Length = 977

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 198/467 (42%), Positives = 280/467 (59%), Gaps = 1/467 (0%)

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           V P+   F S  +AC  +   D+G  +HS  V+ G   DVFV ++++D+YAKCG + ++ 
Sbjct: 6   VRPDDHIFPSATKACGILSRCDIGQSVHSFAVKTGYDCDVFVGSSMVDMYAKCGEIGDAR 65

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
           ++F E P RN V+W+ MI GY Q+GE  +A+ +F + L E +   + T+SSV+R C +  
Sbjct: 66  KMFDEMPDRNVVSWSGMIYGYSQMGEDEEALRLFKQALIEDLDVNDFTFSSVVRVCGNST 125

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
            LE G Q+H L +K +YD    V ++LI +Y+KCG I DA LVF  +   N   WNAM+ 
Sbjct: 126 LLELGKQIHGLCLKTSYDSSSFVGSSLISLYSKCGVIEDAYLVFHEIPIRNLGMWNAMLI 185

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
             + H  + +   +F  M+  G +PN +TF+ VL ACS+ GL+E+G+ YF+ M   YGIE
Sbjct: 186 ACAQHAHTEKAFDLFKQMEGVGMKPNFITFLCVLYACSHAGLVEKGQFYFELM-KEYGIE 244

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P  +HY SMV LLGRAG L  A  +I+ +P +P+  +W ALL  C IH + E+    A  
Sbjct: 245 PGAQHYASMVDLLGRAGKLKDAVSIIKKMPMEPTESVWGALLTGCRIHGDTELASFVADR 304

Query: 639 ILDFEPEDEATHVLLSNIYAMARSWEKAASKEPGLSWIENQGMVHYFRAGDTSHADMNII 698
           + +  P   A         A     ++   KE GLSW+E    +H F AGD SH     I
Sbjct: 305 VFELGPVSSAAGRYEEAARARKMLRDQGVKKETGLSWVEEGNRIHTFAAGDRSHPYTKDI 364

Query: 699 RGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRI 758
              LE L  +  +AGYI D S VL++V  +EK + +  HSE+LA+AF L   PP  PIR+
Sbjct: 365 YKKLEELGEEMERAGYIADTSFVLQEVDGEEKNQTIRYHSERLAIAFGLISFPPERPIRV 424

Query: 759 IKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +KNLR+C DCHTAIK +SK   R II+RD +RFH F+DG CSC D+W
Sbjct: 425 MKNLRVCGDCHTAIKFMSKCCGRTIIVRDNNRFHRFEDGNCSCRDYW 471



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 94/292 (32%), Positives = 157/292 (53%), Gaps = 7/292 (2%)

Query: 237 GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNA 296
           G +P++  F    KAC  L    + +S H  A+KT Y+ D++V  +++D+Y K GEI +A
Sbjct: 5   GVRPDDHIFPSATKACGILSRCDIGQSVHSFAVKTGYDCDVFVGSSMVDMYAKCGEIGDA 64

Query: 297 RRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP---NQFTFVSVLQAC 353
           R++F+EMP ++V+ WS MI  Y+Q     +A+ LF   +QA +     N FTF SV++ C
Sbjct: 65  RKMFDEMPDRNVVSWSGMIYGYSQMGEDEEALRLF---KQALIEDLDVNDFTFSSVVRVC 121

Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
                L+LG QIH L ++    S  FV ++L+ +Y+KCG +E++  +F E P RN   WN
Sbjct: 122 GNSTLLELGKQIHGLCLKTSYDSSSFVGSSLISLYSKCGVIEDAYLVFHEIPIRNLGMWN 181

Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
            M++   Q     KA  +F +M    +    +T+  VL AC+    +E G     L  + 
Sbjct: 182 AMLIACAQHAHTEKAFDLFKQMEGVGMKPNFITFLCVLYACSHAGLVEKGQFYFELMKEY 241

Query: 474 NYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHG 524
             +       +++D+  + G + DA  ++  M  +  E  W A+++G  +HG
Sbjct: 242 GIEPGAQHYASMVDLLGRAGKLKDAVSIIKKMPMEPTESVWGALLTGCRIHG 293



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 130/266 (48%), Gaps = 16/266 (6%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           + H + ++ ++C          ++H   +K G   D+F  + ++++Y K   + DA K+F
Sbjct: 9   DDHIFPSATKACGILSRCDIGQSVHSFAVKTGYDCDVFVGSSMVDMYAKCGEIGDARKMF 68

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           DEMP+RN +S+   I GY+   +  EA+ LF     E  ++N F F++ ++V  +    E
Sbjct: 69  DEMPDRNVVSWSGMIYGYSQMGEDEEALRLFKQALIEDLDVNDFTFSSVVRVCGNSTLLE 128

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-------GLFNDCF---- 223
           L   +     K  +DS++FVG++LI  +S CG +E A  VF        G++N       
Sbjct: 129 LGKQIHGLCLKTSYDSSSFVGSSLISLYSKCGVIEDAYLVFHEIPIRNLGMWNAMLIACA 188

Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                E+A + F QM  VG KPN  TF  VL AC     +   +       +   E    
Sbjct: 189 QHAHTEKAFDLFKQMEGVGMKPNFITFLCVLYACSHAGLVEKGQFYFELMKEYGIEPGAQ 248

Query: 279 VAVALLDLYTKSGEISNARRIFEEMP 304
              +++DL  ++G++ +A  I ++MP
Sbjct: 249 HYASMVDLLGRAGKLKDAVSIIKKMP 274



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/197 (35%), Positives = 104/197 (52%), Gaps = 4/197 (2%)

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGS 494
           ML+  V   +  + S  +AC  L+  + G  VH   VK  YD DV V ++++DMYAKCG 
Sbjct: 1   MLDNGVRPDDHIFPSATKACGILSRCDIGQSVHSFAVKTGYDCDVFVGSSMVDMYAKCGE 60

Query: 495 ITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSA 554
           I DAR +FD M D N VSW+ MI GYS  G   E L++F          N+ TF  V+  
Sbjct: 61  IGDARKMFDEMPDRNVVSWSGMIYGYSQMGEDEEALRLFKQALIEDLDVNDFTFSSVVRV 120

Query: 555 CSNGGLLEQG-EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSV 613
           C N  LLE G + +   +  +Y     +   +S++SL  + G ++ A  +   IP + ++
Sbjct: 121 CGNSTLLELGKQIHGLCLKTSYDSSSFVG--SSLISLYSKCGVIEDAYLVFHEIPIR-NL 177

Query: 614 MIWRALLGACIIHNNVE 630
            +W A+L AC  H + E
Sbjct: 178 GMWNAMLIACAQHAHTE 194



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 125/251 (49%), Gaps = 17/251 (6%)

Query: 185 KLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF----------------EEALN 228
           K G+D + FVG++++D ++ CG +  ARK+FD + +                   EEAL 
Sbjct: 38  KTGYDCDVFVGSSMVDMYAKCGEIGDARKMFDEMPDRNVVSWSGMIYGYSQMGEDEEALR 97

Query: 229 FFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYT 288
            F Q        N+FTF+ V++ C     + + K  HG  LKT Y+   +V  +L+ LY+
Sbjct: 98  LFKQALIEDLDVNDFTFSSVVRVCGNSTLLELGKQIHGLCLKTSYDSSSFVGSSLISLYS 157

Query: 289 KSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVS 348
           K G I +A  +F E+P +++  W+ M+   AQ   +  A +LF +M    + PN  TF+ 
Sbjct: 158 KCGVIEDAYLVFHEIPIRNLGMWNAMLIACAQHAHTEKAFDLFKQMEGVGMKPNFITFLC 217

Query: 349 VLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KR 407
           VL AC+    ++ G     L+   G+        +++D+  + G+++++V +  + P + 
Sbjct: 218 VLYACSHAGLVEKGQFYFELMKEYGIEPGAQHYASMVDLLGRAGKLKDAVSIIKKMPMEP 277

Query: 408 NHVTWNTMIVG 418
               W  ++ G
Sbjct: 278 TESVWGALLTG 288


>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Vitis vinifera]
          Length = 650

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 216/582 (37%), Positives = 328/582 (56%), Gaps = 41/582 (7%)

Query: 265 HGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLS 324
           H   ++  +  D ++   LL   +K   I  A RIF+     +V  ++ +I  +  +   
Sbjct: 69  HAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNY 128

Query: 325 IDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNAL 384
           ++A++L+ RM    + P+ +   S+L+AC +   L  G ++HS  +++G  S+  V   +
Sbjct: 129 LEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRI 188

Query: 385 MDVYAKCGRMENSVELFAESP------------------------------KRNHVTWNT 414
           M++Y KCG + ++  +F E P                              +++ V W  
Sbjct: 189 MELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTA 248

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
           MI G+V+  E  +A+  F  M  E V   E T   VL AC+ L ALE G  VH    K  
Sbjct: 249 MIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFE 308

Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
            ++++ V NALI+MY++CGSI +A+ VFD M D + +++N MISG SM+G S + +++F 
Sbjct: 309 IELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFR 368

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
           +M  R  RP N+TFVGVL+ACS+GGL++ G   F SM  +Y +EP IEHY  MV LLGR 
Sbjct: 369 VMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRV 428

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLS 654
           G L++A  LI  +   P  ++   LL AC +H N+E+G   A+ + D    D  T+VLLS
Sbjct: 429 GRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLS 488

Query: 655 NIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLE 703
           ++YA +  W++AA            KEPG S IE    +H F  GD  H     I   LE
Sbjct: 489 HVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPQKERIYEKLE 548

Query: 704 WLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLR 763
            LN   R  GY P+   VL+D+ + EKE  L +HSE+LA+ + L    P + IR++KNLR
Sbjct: 549 ELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAMHSERLAICYGLISTEPCTMIRVMKNLR 608

Query: 764 ICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           +C DCH+AIK+I+KI +R+I++RD +RFH+F++G CSCGD+W
Sbjct: 609 VCYDCHSAIKLIAKITRRKIVVRDRNRFHYFENGACSCGDYW 650



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 198/421 (47%), Gaps = 51/421 (12%)

Query: 135 SSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFV 194
           S    + + + + L R GH  +PF     L+        +    +F    +  H+ N ++
Sbjct: 59  SRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIF----QYTHNPNVYL 114

Query: 195 GTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLG 254
            TALID F   G                + EA+  +S+M      P+N+  A +LKAC  
Sbjct: 115 YTALIDGFVSSGN---------------YLEAIQLYSRMLHESILPDNYLMASILKACGS 159

Query: 255 LDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP---------- 304
              +R  +  H  ALK  +  +  V + +++LY K GE+ +ARR+FEEMP          
Sbjct: 160 QLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMI 219

Query: 305 --------------------KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
                               +KD + W+ MI  + + + +  A+E F  M+   V PN+F
Sbjct: 220 SSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEF 279

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           T V VL AC+ +  L++G  +HS + +  +  ++FV NAL+++Y++CG ++ +  +F E 
Sbjct: 280 TIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEM 339

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
             R+ +T+NTMI G    G+  +A+ +F  M+  ++  T VT+  VL AC+    ++ G 
Sbjct: 340 KDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGF 399

Query: 465 QV-HCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSM 522
           ++ H +      +  +     ++D+  + G + +A  L+  M    + +    ++S   M
Sbjct: 400 EIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKM 459

Query: 523 H 523
           H
Sbjct: 460 H 460



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 129/508 (25%), Positives = 213/508 (41%), Gaps = 79/508 (15%)

Query: 30  AQAALSTQQCSNSTTT---PITFS----VSEFNSHSYATSLQSCIQND---------DLQ 73
           AQ   ST  C  ++TT    + FS        NS+S   SL+S  Q            + 
Sbjct: 4   AQLGNSTMPCPYASTTFAASLPFSGPSPKPHPNSNSNPKSLKSLDQKQIISLLQRSRHIN 63

Query: 74  TAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYT 133
             + IH Q+++ G+  D F    LL    K + +  A+++F      N   +   I G+ 
Sbjct: 64  QVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFV 123

Query: 134 VSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAF 193
            S  ++EA+ L+S +  E    + +   + LK   S         V +   KLG  SN  
Sbjct: 124 SSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRL 183

Query: 194 VGTALIDAFSVCGCVEFARKVFDGLFNDC---------------FEEALNFFSQMRAV-- 236
           V   +++ +  CG +  AR+VF+ +  D                 EEA   FS++R    
Sbjct: 184 VRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDT 243

Query: 237 --------GF---------------------KPNNFTFAFVLKACLGLDTIRVAKSAHGC 267
                   GF                     +PN FT   VL AC  L  + + +  H  
Sbjct: 244 VCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSY 303

Query: 268 ALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDA 327
             K   E++L+V  AL+++Y++ G I  A+ +F+EM  +DVI ++ MI+  +    S  A
Sbjct: 304 MRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQA 363

Query: 328 VELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI-HSLVVRVGLLSDVFVSNALMD 386
           +ELF  M    + P   TFV VL AC+    +D G +I HS+     +   +     ++D
Sbjct: 364 IELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVD 423

Query: 387 VYAKCGRMENSVELFAE---SPKRNHVTWNTMIVG-----YVQLGEVGKAMIMFSKMLEE 438
           +  + GR+E + +L      +P  +H+   T++        ++LGE        +K LE+
Sbjct: 424 LLGRVGRLEEAYDLIRTMKMTP--DHIMLGTLLSACKMHKNLELGE------QVAKELED 475

Query: 439 QVPATEVTYSSVLRACASLAALEPGMQV 466
           +  A   TY  +    AS    +   QV
Sbjct: 476 RGQADSGTYVLLSHVYASSGKWKEAAQV 503



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 127/271 (46%), Gaps = 31/271 (11%)

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGE 424
           IH+ ++R G   D F+   L+   +KC  ++ +  +F  +   N   +  +I G+V  G 
Sbjct: 68  IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 127

Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA 484
             +A+ ++S+ML E +       +S+L+AC S  AL  G +VH   +K  +  + +V   
Sbjct: 128 YLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLR 187

Query: 485 LIDMYAKCGSITDARLVFDMMND------------------------------WNEVSWN 514
           ++++Y KCG + DAR VF+ M +                               + V W 
Sbjct: 188 IMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWT 247

Query: 515 AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
           AMI G+  +  +   L+ F  MQ    RPN  T V VLSACS  G LE G  +  S +  
Sbjct: 248 AMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGR-WVHSYMRK 306

Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
           + IE  +    +++++  R G +D+A  + +
Sbjct: 307 FEIELNLFVGNALINMYSRCGSIDEAQTVFD 337


>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 855

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 233/693 (33%), Positives = 364/693 (52%), Gaps = 29/693 (4%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           +  S +Y   + +C     L+    IH  +LK     DL   N +LN+Y K   L DA K
Sbjct: 154 QLESSTYGNLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARK 213

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
            FD M  RN +S+   I GY+ + Q  +A+ ++  + + G+  +P  F + +K     G 
Sbjct: 214 AFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGD 273

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------G 217
            +L   +   V K G+D +     ALI  ++  G +  A  VF                G
Sbjct: 274 IDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITG 333

Query: 218 LFNDCFE-EALNFFSQMRAVGF-KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
                +E EAL  F  M   GF +PN F F  V  AC  L      +  HG   K     
Sbjct: 334 FTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGR 393

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
           +++   +L D+Y K G + +A R F ++   D++ W+ +IA ++ +    +A+  FC+M 
Sbjct: 394 NVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMM 453

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
              + P+  TF+S+L AC +   ++ G QIHS ++++GL  +  V N+L+ +Y KC  + 
Sbjct: 454 HTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLH 513

Query: 396 NSVELFAE-SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
           ++  +F + S   N V+WN ++   +Q  + G+   +F  ML  +     +T +++L  C
Sbjct: 514 DAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTC 573

Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
           A LA+LE G QVHC +VK+   +DV V+N LIDMYAKCGS+  AR VF    + + VSW+
Sbjct: 574 AELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSWS 633

Query: 515 AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
           ++I GY+  GL  E L +F +M+  G +PN +T++GVLSACS+ GL+E+G  ++ +M   
Sbjct: 634 SLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYNTMEIE 693

Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL 634
            GI P  EH + MV LL RAG L +A   I+ + F P + +W+ LL +C  H NV+I   
Sbjct: 694 LGIPPTREHVSCMVDLLARAGCLYEAENFIKKMGFNPDITMWKTLLASCKTHGNVDIAER 753

Query: 635 SAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVH 683
           +A++IL  +P + A  VLLSNI+A   +W++ A            K PG SWI  +  +H
Sbjct: 754 AAENILKLDPSNSAALVLLSNIHASVGNWKEVARLRNLMKQMGVQKVPGQSWIAVKDQIH 813

Query: 684 YFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIP 716
            F + D SH     I  MLE L ++    GY P
Sbjct: 814 VFFSEDNSHQQRGDIYTMLEDLWLQMLDDGYDP 846



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 55/252 (21%), Positives = 103/252 (40%), Gaps = 23/252 (9%)

Query: 49  FSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLP 108
           FS ++ ++ +  T L +C +   L+    +HC  +K G  +D+  +N L+++Y K   L 
Sbjct: 556 FSENKPDNITITTILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLK 615

Query: 109 DATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLV 168
            A  +F      + +S+ + I GY       EA+ LF  +   G + N   +   L    
Sbjct: 616 HARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACS 675

Query: 169 SMGWAELCPCVFACV-YKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEAL 227
            +G  E     +  +  +LG        + ++D  +  GC+                EA 
Sbjct: 676 HIGLVEEGWHFYNTMEIELGIPPTREHVSCMVDLLARAGCL---------------YEAE 720

Query: 228 NFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLY 287
           NF  +M   GF P+   +  +L +C     + +A+ A    LK    +D   + AL+ L 
Sbjct: 721 NFIKKM---GFNPDITMWKTLLASCKTHGNVDIAERAAENILK----LDPSNSAALVLLS 773

Query: 288 TKSGEISNARRI 299
                + N + +
Sbjct: 774 NIHASVGNWKEV 785


>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 874

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 223/654 (34%), Positives = 351/654 (53%), Gaps = 62/654 (9%)

Query: 206 GCVEFARKVFDGLFN----------------DCFEEALNFFSQMRAVGFKPNNFTFAFVL 249
           G V +ARKVFD +                  +C E  ++ +  M     KP+ FTF F+L
Sbjct: 83  GDVYYARKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLL 142

Query: 250 KACLGLDTIRVAKSAHGCALKTCY-EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDV 308
           K       ++  K     A+   + + +L+V    + L++  G ++ AR+IF+     +V
Sbjct: 143 KGFTKDMALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEV 202

Query: 309 IPWSFMIARYAQTDLSIDAVELFCRMRQAF--VAPNQFTFVSVLQACATMEGLDLGNQIH 366
           + W+ +++ Y +     ++  LF  M +    V+PN  T V +L AC+ ++ L  G  I+
Sbjct: 203 VTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIY 262

Query: 367 SLVVRVGLLS-DVFVSNALMDVYAKCGRMENSVELFAES--------------------- 404
           +  ++ G++  ++ + NAL+D++A CG M+ +  +F E                      
Sbjct: 263 NKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRI 322

Query: 405 ----------PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
                     P+R++V+W  MI GY+++    + + +F  M    V   E T  S+L AC
Sbjct: 323 DLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTAC 382

Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
           A L ALE G        K     D  + NALIDMY KCG++  A+ +F+ M   ++ +W 
Sbjct: 383 AHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWT 442

Query: 515 AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
           AMI G + +G   E L +F  M +    P+ +T++GV+ AC++ GL+ +G+ +F +M   
Sbjct: 443 AMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQ 502

Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL 634
           +GI+P + HY  MV LLGRAGHL +A ++I  +P +P+ ++W +LLGAC +H NV++  +
Sbjct: 503 HGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLAEM 562

Query: 635 SAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVH 683
           +A  IL+ EPE+ A +VLL NIYA  + W           E+   K PG S +E  G+V+
Sbjct: 563 AANEILELEPENGAVYVLLCNIYAACKKWKNLHNVRKMMMERGIKKIPGCSLMEMNGIVY 622

Query: 684 YFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLAL 743
            F AGD SH     I   LE +      AGY PD S V  DV E++KE  L++HSEKLA+
Sbjct: 623 EFVAGDKSHPQSKEIYAKLENMKQDLSNAGYSPDTSEVFLDVGEEDKETALYMHSEKLAI 682

Query: 744 AFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDG 797
           A+AL        IRI+KNLR+CVDCH    ++SK+  RE+I+RD  RFHHF+ G
Sbjct: 683 AYALISSGKGVTIRIVKNLRMCVDCHHMAMVVSKVYNRELIVRDKTRFHHFRHG 736



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 146/529 (27%), Positives = 245/529 (46%), Gaps = 68/529 (12%)

Query: 57  HSYATSLQSCIQN-DDLQTAMTIHCQVLKKG-NCLDLFATNVLLNVYVKLN-RLPDATKL 113
           HS+  S  S ++  + +     IH Q +K G +   LF T V++    K +  +  A K+
Sbjct: 32  HSFVKSPISLLETCNTMYEINQIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKV 91

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           FDE+P+ +   + T I+GY+  +     V L+  +     + + F F   LK     G+ 
Sbjct: 92  FDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLK-----GFT 146

Query: 174 ELCPCVFACVYKLGH-------DSNAFVGTALIDAFSVCGCVEFARKVFD---------- 216
           +     +  V  L H       DSN FV    I  FS+CG V +ARK+FD          
Sbjct: 147 KDMALKYGKVL-LNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTW 205

Query: 217 ----GLFN--DCFEEALNFFSQM--RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCA 268
                 +N    +EE+   F +M  +     PN+ T   +L AC  L  +   K  +   
Sbjct: 206 NVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKY 265

Query: 269 LKT-CYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQT---DLS 324
           +K    E +L +  AL+D++   GE+  AR +F+EM  +DVI W+ ++  +A T   DL+
Sbjct: 266 IKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLA 325

Query: 325 ------------------IDA----------VELFCRMRQAFVAPNQFTFVSVLQACATM 356
                             ID           + LF  M+ + V P++FT VS+L ACA +
Sbjct: 326 RKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHL 385

Query: 357 EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMI 416
             L+LG    + + +  + +D F+ NAL+D+Y KCG +E + ++F E  K++  TW  MI
Sbjct: 386 GALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMI 445

Query: 417 VGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHC-LTVKANY 475
           VG    G   +A+ MFS MLE  V   E+TY  V+ AC  +  +  G      + V+   
Sbjct: 446 VGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGI 505

Query: 476 DMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
             ++     ++D+  + G + +A  ++ +M    N + W +++    +H
Sbjct: 506 KPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVH 554



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 173/367 (47%), Gaps = 37/367 (10%)

Query: 289 KSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVS 348
           +SG++  AR++F+E+P+  V  W+ MI  Y++ + S   V L+  M    + P+ FTF  
Sbjct: 81  ESGDVYYARKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPF 140

Query: 349 VLQACATMEGLDLGNQIHSLVVRVGLL-SDVFVSNALMDVYAKCGRMENSVELFAESPKR 407
           +L+       L  G  + +  V  G L S++FV    + +++ CG +  + ++F      
Sbjct: 141 LLKGFTKDMALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGW 200

Query: 408 NHVTWNTMIVGYVQLGEVGKAMIMFSKMLE--EQVPATEVTYSSVLRACASLAALEPGMQ 465
             VTWN ++ GY +     ++  +F +M +  E V    VT   +L AC+ L  L  G  
Sbjct: 201 EVVTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKC 260

Query: 466 VHCLTVKAN-YDMDVVVANALIDMYAKCGSITDARLVFDMMN-----DWNE--------- 510
           ++   +K    + ++++ NALIDM+A CG +  AR VFD M       W           
Sbjct: 261 IYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTC 320

Query: 511 -----------------VSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLS 553
                            VSW AMI GY       EVL +F  MQ    +P+  T V +L+
Sbjct: 321 RIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILT 380

Query: 554 ACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSV 613
           AC++ G LE GE + K+ +    I+       +++ +  + G+++KA K+   +  +   
Sbjct: 381 ACAHLGALELGE-WAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQ-KKDK 438

Query: 614 MIWRALL 620
             W A++
Sbjct: 439 FTWTAMI 445


>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
 gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
          Length = 654

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 229/606 (37%), Positives = 327/606 (53%), Gaps = 51/606 (8%)

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR--RIFEEMPK 305
            L  C  L  I   K  H   L    +   YV   L+   TK     +     IF ++  
Sbjct: 52  TLDGCKNLTQI---KQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIFNQVNY 108

Query: 306 KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
            +   ++ +I  Y   +   ++ E +  MR+  V P  FTF ++ +AC     + LG QI
Sbjct: 109 PNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLGRQI 168

Query: 366 HSLVVRVGLLS-DVFVSNALMDVYAKCG-------------------------------R 393
           H   + VG    D+ V N+++D+Y KCG                                
Sbjct: 169 HGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVKSGN 228

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           ME++ ELF   P ++ V W  M+ G+ Q  +  +A++ F KM E  V   E+T   V+ A
Sbjct: 229 MESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISA 288

Query: 454 CASLAALEPGMQVHCLTVKANY--DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEV 511
           CA L A +    +  +  K+ +     VVV +ALIDMY+KCGS+ DA  VF  M + N  
Sbjct: 289 CAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVY 348

Query: 512 SWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSM 571
           S+++MI G++MHG   + +K+FD M +   +PN +TF+GVL+ACS+ G++EQG   F+ M
Sbjct: 349 SYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELM 408

Query: 572 VANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEI 631
              YGI+P  +HYT MV LLGRAG L +A +L++ +P +P   +W ALLGAC IH + +I
Sbjct: 409 EKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALLGACRIHKSPDI 468

Query: 632 GRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQ- 679
             ++A H+ + EP     ++LL+NIYA    W   ++           K P  SWIE++ 
Sbjct: 469 AAIAANHLFELEPYCIGNYILLANIYASCGRWNDVSTVRKLMRTRGLRKNPAFSWIESEK 528

Query: 680 GMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSE 739
           GMVH F +GD +H     I+  LE L  +    GY P LS+V  DV +++K R L  HSE
Sbjct: 529 GMVHEFFSGDMTHPRSGEIKQALEDLLDRLEAKGYQPHLSSVSYDVNDEDKRRILMTHSE 588

Query: 740 KLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCC 799
           KLALAF L    P S IRI+KNLRIC DCH+ I   S+I  REII+RD+ RFHHF DG C
Sbjct: 589 KLALAFGLISTIPGSKIRIVKNLRICEDCHSVICGASQITGREIIVRDIMRFHHFHDGIC 648

Query: 800 SCGDFW 805
           SCG+FW
Sbjct: 649 SCGNFW 654



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 164/346 (47%), Gaps = 44/346 (12%)

Query: 218 LFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHG-CALKTCYEMD 276
           L  +  +E+  F+S MR  G  P +FTF  + KAC     + + +  HG   L   +  D
Sbjct: 122 LIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLGRQIHGQTILVGGFGED 181

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARY------------------ 318
           L+V  +++D+Y K G +   R++F+EMP +DVI W+ +I+ Y                  
Sbjct: 182 LHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVKSGNMESAGELFDGLPV 241

Query: 319 -------------AQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
                        AQ     +A+  F +M++  V  ++ T + V+ ACA +      + I
Sbjct: 242 KDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGAAKYADWI 301

Query: 366 HSLVVR--VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
             +  +   G    V V +AL+D+Y+KCG + ++  +F    +RN  ++++MI+G+   G
Sbjct: 302 RDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMILGFAMHG 361

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV-----HCLTVKANYDMD 478
            V  AM +F +M++ ++    VT+  VL AC+    +E G Q+      C  +K + D  
Sbjct: 362 RVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYGIKPSADH- 420

Query: 479 VVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
                 ++D+  + G + +A  LV  M  + +   W A++    +H
Sbjct: 421 ---YTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALLGACRIH 463



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 135/559 (24%), Positives = 227/559 (40%), Gaps = 118/559 (21%)

Query: 61  TSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL--FDEMP 118
           T+L  C    +L     +H ++L  G     +    L+    KLN   D   L  F+++ 
Sbjct: 51  TTLDGC---KNLTQIKQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIFNQVN 107

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVL---VSMGWAEL 175
             N   +   I+GY +  +  E+   +S + +EG     F FTA  K     + +G    
Sbjct: 108 YPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLGRQ 167

Query: 176 CPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN--------------- 220
                  V   G D +  VG ++ID +  CG +E  RKVFD + N               
Sbjct: 168 IHGQTILVGGFGEDLH--VGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVK 225

Query: 221 --------DCFE------------------------EALNFFSQMRAVGFKPNNFTFAFV 248
                   + F+                        EA+ FF +M+  G + +  T   V
Sbjct: 226 SGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGV 285

Query: 249 LKACLGLDTIRVAKSAHGCALKTCY--EMDLYVAVALLDLYTKSGEISNARRIFEEMPKK 306
           + AC  L   + A      A K+ +  +  + V  AL+D+Y+K G + +A R+F+ M ++
Sbjct: 286 ISACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKER 345

Query: 307 DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIH 366
           +V  +S MI  +A      DA++LF  M +  + PN+ TF+ VL AC+    ++ G QI 
Sbjct: 346 NVYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIF 405

Query: 367 SLVVR-VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEV 425
            L+ +  G+         ++D+  + GR++ + EL    P   H             G V
Sbjct: 406 ELMEKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPH-------------GGV 452

Query: 426 GKAMIMFSKMLEEQVPATEVTYSSVLRACAS--LAALEPGMQVHCLTVKANYDMDVVVAN 483
             A++           A  +  S  + A A+  L  LEP    +C+    NY   +++AN
Sbjct: 453 WGALL----------GACRIHKSPDIAAIAANHLFELEP----YCI---GNY---ILLAN 492

Query: 484 ALIDMYAKCGSITDARLVFDMMN----------DWNEVSWNAMI----SGYSMHGLSAEV 529
               +YA CG   D   V  +M            W E S   M+    SG   H  S E+
Sbjct: 493 ----IYASCGRWNDVSTVRKLMRTRGLRKNPAFSWIE-SEKGMVHEFFSGDMTHPRSGEI 547

Query: 530 LK----VFDLMQQRGWRPN 544
            +    + D ++ +G++P+
Sbjct: 548 KQALEDLLDRLEAKGYQPH 566


>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 654

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 212/584 (36%), Positives = 329/584 (56%), Gaps = 19/584 (3%)

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           P   TF  ++ +C+  +++      H   + +  + D Y+A  L+++Y   G + +A ++
Sbjct: 72  PTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKV 131

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATME-- 357
           F+E  +K +  W+ +    A      D + L+ +M    +  N+FT+  VL+AC   E  
Sbjct: 132 FDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELS 191

Query: 358 --GLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTM 415
              L  G +IH+ ++R G    V V   L+DVYA+ G +  +  +F   P +N V+W+ M
Sbjct: 192 ICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAM 251

Query: 416 IVGYVQLGEVGKAMIMFSKMLEE---QVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
           I  Y +     KA+ +F  M+ E    VP   +T  SVL+ACASLAALE G  VH   ++
Sbjct: 252 IACYAKNEMPMKALELFQIMMLEACDTVP-NPITMVSVLQACASLAALEHGKLVHAYVLR 310

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
              D  + V N LI MY +CG I+  + VFD M   + +SWN++IS Y MHGL  + +++
Sbjct: 311 RGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQI 370

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
           F+ M  RG  P+ +TF+ VL ACS+ GL+E+ +  F+SM+  Y I P +EHY  MV +LG
Sbjct: 371 FENMINRGVSPSYITFITVLCACSHAGLVEEAKILFESMLNKYRIHPRMEHYACMVDILG 430

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVL 652
           RA  LD+A +LI+ + F+P   +W +LLG+C IH NVE+   ++  + + EP++   +VL
Sbjct: 431 RANRLDEAIELIQNMDFKPGPTVWGSLLGSCRIHCNVELAERASAMLFELEPKNAGNYVL 490

Query: 653 LSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGM 701
           LS+IYA +R W            +   K P  SWIE +  ++   + +  +  +  +   
Sbjct: 491 LSHIYAKSRMWNDVRRVRKQLESRGLQKIPSCSWIEVKRKIYSLVSIEEYNPQIEELCAF 550

Query: 702 LEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKN 761
           L  L  + +  GY+P  + V  D+ E+EKER +  HS KLA+AF L        IRI  N
Sbjct: 551 LITLLTEIKNQGYVPQTNVVTYDLDEEEKERIVLGHSGKLAVAFGLINTSKGEIIRISNN 610

Query: 762 LRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           LR+C DCH  +K +SK   REI++RDV+RFH F+DG CSCGD+W
Sbjct: 611 LRLCEDCHAFMKFVSKFTNREILLRDVNRFHCFKDGVCSCGDYW 654



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 111/455 (24%), Positives = 200/455 (43%), Gaps = 44/455 (9%)

Query: 7   YKTFSCKQLTHQSKINAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSC 66
           Y T   K   +   I +  RG + + A+    C  + T             ++   + SC
Sbjct: 36  YPTKDIKSNNNDDLIQSLCRGGNLKQAVQLLCCEPNPT-----------KKTFELLINSC 84

Query: 67  IQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFV 126
           I+ + L   + +H +++  G   D +    L+N+Y  L  +  A K+FDE  E+    + 
Sbjct: 85  IEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKVFDETREKTIFVWN 144

Query: 127 TTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC-----VFA 181
              +   ++S+  + + L+  ++  G   N F +T  LK  V +    +CP      + A
Sbjct: 145 AIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACV-VSELSICPLRKGKEIHA 203

Query: 182 CVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND----------CFE------E 225
            + + G++ +  V T L+D ++  G V +A  VF  + +           C+       +
Sbjct: 204 HILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMK 263

Query: 226 ALNFFSQM--RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
           AL  F  M   A    PN  T   VL+AC  L  +   K  H   L+   +  L V   L
Sbjct: 264 ALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTL 323

Query: 284 LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
           + +Y + GEIS  +R+F+ M K+DVI W+ +I+ Y    L   A+++F  M    V+P+ 
Sbjct: 324 ITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSY 383

Query: 344 FTFVSVLQACATMEGLDLGNQI--HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
            TF++VL AC +  GL    +I   S++ +  +   +     ++D+  +  R++ ++EL 
Sbjct: 384 ITFITVLCAC-SHAGLVEEAKILFESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELI 442

Query: 402 AESP-KRNHVTWNTM-----IVGYVQLGEVGKAMI 430
                K     W ++     I   V+L E   AM+
Sbjct: 443 QNMDFKPGPTVWGSLLGSCRIHCNVELAERASAML 477


>gi|359493563|ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71420-like [Vitis vinifera]
          Length = 741

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 227/656 (34%), Positives = 359/656 (54%), Gaps = 50/656 (7%)

Query: 189 DSNAFVGTALIDAFSVCGCVEFARKVFD--------------------GLFNDCFEEALN 228
           D N F+   +++ ++ CG +++A ++FD                    G  N+CF     
Sbjct: 97  DFNLFLTNHVVNMYAKCGSLDYAHQMFDEMPEKNIVSWTALVSGYAQHGRSNECFR---- 152

Query: 229 FFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYT 288
            F  M  +  +P  F FA V+ AC G D     +  H  ALKT ++  +YV  AL+ +Y 
Sbjct: 153 VFRGM-LIWHQPTEFAFASVISACGGDDN--CGRQVHALALKTSFDSCVYVGNALIMMYC 209

Query: 289 KS-GEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFV 347
           KS G    A  ++E M  ++++ W+ MIA +        A+ELF +M    +  ++ T V
Sbjct: 210 KSCGGADEAWNVYEAMGFRNLVSWNSMIAGFQVCGCGNRALELFSQMHVGGIRFDRATLV 269

Query: 348 SVLQA-CATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCG-RMENSVELFAESP 405
           S+    C   +GL+   Q+  L ++ G +  + V+ AL+  Y+  G  + +   +F E  
Sbjct: 270 SIFSCLCGMGDGLECCFQLQCLTIKTGFILKIEVATALVKAYSSLGGEVSDCYRIFLELD 329

Query: 406 KRNHV-TWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
            R  V +W  +I  + +  +  KA+++F + L E +      +S VL+ACA LA     +
Sbjct: 330 GRQDVVSWTGIIAAFAER-DPKKALVIFRQFLRECLAPDRHMFSIVLKACAGLATERHAL 388

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
            V    +K  ++ D+V+ANALI   A+CGS+  ++ VFD M   + VSWN+M+  Y+MHG
Sbjct: 389 TVQSHVLKVGFEDDIVLANALIHACARCGSVALSKQVFDKMGSRDTVSWNSMLKAYAMHG 448

Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY 584
              E L +F  M  +   P+  TFV +LSACS+ G+ E+G   F++M  N+GI P ++HY
Sbjct: 449 QGKEALLLFSQMDAQ---PDGATFVALLSACSHAGMAEEGAKIFETMSNNHGIVPQLDHY 505

Query: 585 TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEP 644
             MV +LGRAG + +A +LI+ +P +P  ++W ALLG+C  H   ++ +L+A  + + +P
Sbjct: 506 ACMVDILGRAGQISEAKELIDKMPMEPDSVVWSALLGSCRKHGETKLAKLAAVKLKELDP 565

Query: 645 EDEATHVLLSNIYA----------MARSWE-KAASKEPGLSWIENQGMVHYFRAGDTSHA 693
            +   +VL+SNI+           + R  E K   KEPGLSWIE    VH F +G   H 
Sbjct: 566 NNSLGYVLMSNIFCTDGRFNEARLIRREMEGKIVRKEPGLSWIEVGNQVHEFASGGQQHP 625

Query: 694 DMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMP-- 751
           +   I   LE L  + +  GY+P +S  L D+ ++ KE  L+ HSEKLALAFAL  +   
Sbjct: 626 EKEAICARLEELVRRLKDLGYVPQISLALHDIEDEHKEEQLYYHSEKLALAFALMNVGSI 685

Query: 752 --PSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
               + I+I+KN+RICVDCH  +K+ S++V  EI++RD +RFHHF+   CSC D+W
Sbjct: 686 CCSGNTIKIMKNIRICVDCHNFMKLASELVDMEIVVRDSNRFHHFKAKVCSCNDYW 741



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 144/521 (27%), Positives = 253/521 (48%), Gaps = 49/521 (9%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVL--KKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           H+YA   Q+C +   L     +H  +      +  +LF TN ++N+Y K   L  A ++F
Sbjct: 64  HTYAALFQACARRSSLPEGQALHRHMFLHNPNSDFNLFLTNHVVNMYAKCGSLDYAHQMF 123

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           DEMPE+N +S+   + GY    +  E   +F  +    H+   FAF +   V+ + G  +
Sbjct: 124 DEMPEKNIVSWTALVSGYAQHGRSNECFRVFRGM-LIWHQPTEFAFAS---VISACGGDD 179

Query: 175 LCP-CVFACVYKLGHDSNAFVGTALIDAF-SVCGCVEFARKVFDGL-FND---------- 221
            C   V A   K   DS  +VG ALI  +   CG  + A  V++ + F +          
Sbjct: 180 NCGRQVHALALKTSFDSCVYVGNALIMMYCKSCGGADEAWNVYEAMGFRNLVSWNSMIAG 239

Query: 222 -----CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGL-DTIRVAKSAHGCALKTCYEM 275
                C   AL  FSQM   G + +  T   +     G+ D +          +KT + +
Sbjct: 240 FQVCGCGNRALELFSQMHVGGIRFDRATLVSIFSCLCGMGDGLECCFQLQCLTIKTGFIL 299

Query: 276 DLYVAVALLDLYTK-SGEISNARRIFEEMP-KKDVIPWSFMIARYAQTDLSIDAVELFCR 333
            + VA AL+  Y+   GE+S+  RIF E+  ++DV+ W+ +IA +A+ D    A+ +F +
Sbjct: 300 KIEVATALVKAYSSLGGEVSDCYRIFLELDGRQDVVSWTGIIAAFAERDPK-KALVIFRQ 358

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
             +  +AP++  F  VL+ACA +        + S V++VG   D+ ++NAL+   A+CG 
Sbjct: 359 FLRECLAPDRHMFSIVLKACAGLATERHALTVQSHVLKVGFEDDIVLANALIHACARCGS 418

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           +  S ++F +   R+ V+WN+M+  Y   G+  +A+++FS+M  +   A   T+ ++L A
Sbjct: 419 VALSKQVFDKMGSRDTVSWNSMLKAYAMHGQGKEALLLFSQMDAQPDGA---TFVALLSA 475

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDARLVFDMMN-DWNE 510
           C+     E G ++   T+  N+ +   + +   ++D+  + G I++A+ + D M  + + 
Sbjct: 476 CSHAGMAEEGAKIF-ETMSNNHGIVPQLDHYACMVDILGRAGQISEAKELIDKMPMEPDS 534

Query: 511 VSWNAMISGYSMHG------LSAEVLKVFDLMQQRGWRPNN 545
           V W+A++     HG      L+A  LK  D        PNN
Sbjct: 535 VVWSALLGSCRKHGETKLAKLAAVKLKELD--------PNN 567



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 96/181 (53%), Gaps = 10/181 (5%)

Query: 446 TYSSVLRACASLAALEPG--MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFD 503
           TY+++ +ACA  ++L  G  +  H      N D ++ + N +++MYAKCGS+  A  +FD
Sbjct: 65  TYAALFQACARRSSLPEGQALHRHMFLHNPNSDFNLFLTNHVVNMYAKCGSLDYAHQMFD 124

Query: 504 MMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW-RPNNLTFVGVLSACSNGGLLE 562
            M + N VSW A++SGY+ HG S E  +VF  M    W +P    F  V+SAC  GG   
Sbjct: 125 EMPEKNIVSWTALVSGYAQHGRSNECFRVFRGMLI--WHQPTEFAFASVISAC--GGDDN 180

Query: 563 QGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA-GHLDKAAKLIEGIPFQPSVMIWRALLG 621
            G     ++      + C+    +++ +  ++ G  D+A  + E + F+ +++ W +++ 
Sbjct: 181 CGRQ-VHALALKTSFDSCVYVGNALIMMYCKSCGGADEAWNVYEAMGFR-NLVSWNSMIA 238

Query: 622 A 622
            
Sbjct: 239 G 239


>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 216/567 (38%), Positives = 324/567 (57%), Gaps = 18/567 (3%)

Query: 257 TIRVAKSAHGCALKTCYEMDLYVAVALLDLY--TKSGEISNARRIFEEMPKKDVIPWSFM 314
           +I   K AH   L+T    +   +  L+     + SG+++ AR++F +M   D    + M
Sbjct: 23  SISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTM 82

Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL 374
           I  YA++    +AV L+  M +  V  + +T+  VL ACA +  + LG + H  V++ G 
Sbjct: 83  IRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGF 142

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
            SD+FV NAL+  Y  CG    + ++F ES  R+ VTWN MI  ++  G   KA  +  +
Sbjct: 143 GSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDE 202

Query: 435 MLE-EQVPATEVTYSSVLRACASLAALEPGMQVHCLTV---KANYDMDVVVANALIDMYA 490
           M + + +   EVT  S++ ACA L  LE G  +H  +    K   + D+V+  AL+DMYA
Sbjct: 203 MTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALVDMYA 262

Query: 491 KCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVG 550
           KCGSI  A  VF  M   N  +WNA+I G +MHG   + + +FD M+     P+++TF+ 
Sbjct: 263 KCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIA 322

Query: 551 VLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQ 610
           +L ACS+ GL+++G A F++M   + IEP +EHY  +V LL RA  +D A   IE +P +
Sbjct: 323 LLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIK 382

Query: 611 PSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE------ 664
            + ++W  LLGAC    + ++     + +++ EP+    +V+LSN+YA    W+      
Sbjct: 383 ANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLR 442

Query: 665 -----KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMK-SRKAGYIPDL 718
                K   K PG SWIE  GM+H F AGD SH     I  M+E +  + +   G++P  
Sbjct: 443 KQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGT 502

Query: 719 SAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKI 778
           + VL D+ E+EKE  L++HSEKLA+A  L   P  SPIRI+KNLR+C DCH+ +K+ SK+
Sbjct: 503 ANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTSKV 562

Query: 779 VQREIIIRDVHRFHHFQDGCCSCGDFW 805
             REI+ RD  RFHHF++G CSC DFW
Sbjct: 563 YNREIVARDRSRFHHFKEGSCSCMDFW 589



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 86/349 (24%), Positives = 151/349 (43%), Gaps = 28/349 (8%)

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A KLF +M   +     T I+GY  S    EAV L+  +   G  ++ + +   L     
Sbjct: 64  ARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACAR 123

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD------------- 216
           +G  +L       V K G  S+ FV  ALI  +  CG    A  VFD             
Sbjct: 124 LGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIM 183

Query: 217 ---GLFNDCFEEALNFFSQMRAV-GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALK-T 271
               L     E+A +   +M  +   +P+  T   ++ AC  L  +   K  H  + +  
Sbjct: 184 INAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELD 243

Query: 272 CYEM--DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVE 329
            +E+  DL +  AL+D+Y K G I  A ++F  M  ++V  W+ +I   A      DA+ 
Sbjct: 244 KFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAIS 303

Query: 330 LFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVY 388
           LF +M    + P+  TF+++L AC+    +D G     ++  +  +   +     ++D+ 
Sbjct: 304 LFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLL 363

Query: 389 AKCGRMENSVELFAESP-KRNHVTWNTMI-----VGYVQLGE-VGKAMI 430
            +  ++++++      P K N V W T++      G+  L E +G+ +I
Sbjct: 364 CRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVI 412



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/291 (22%), Positives = 118/291 (40%), Gaps = 36/291 (12%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           ++++Y   L +C +   ++     HC+VLK G   DLF  N L+  Y        A  +F
Sbjct: 110 DNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVF 169

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           DE   R+ +++   I  +       +A  L   + +  + L P   T    V        
Sbjct: 170 DESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDN-LRPDEVTMVSLVPACAQLGN 228

Query: 175 LCPCVFACVY-----KLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-FNDCF----- 223
           L    F   Y     K   + +  + TAL+D ++ CG ++ A +VF  +   + F     
Sbjct: 229 LERGKFLHSYSKELDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAL 288

Query: 224 ----------EEALNFFSQMRAVGFKPNNFTFAFVLKACL-------GLDTIRVAKSAHG 266
                     E+A++ F QM      P++ TF  +L AC        GL   +  K+   
Sbjct: 289 IGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKN--- 345

Query: 267 CALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
              +    M+ Y  V  +DL  ++ ++ +A    E MP K + + W+ ++ 
Sbjct: 346 -KFQIEPRMEHYGCV--VDLLCRARKVDDALAFIENMPIKANSVLWATLLG 393


>gi|302807997|ref|XP_002985693.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
 gi|300146602|gb|EFJ13271.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
          Length = 706

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 216/651 (33%), Positives = 353/651 (54%), Gaps = 32/651 (4%)

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG-----------LFNDCFE-----EA 226
           + ++G  S+ +V   L+  +  CG +E AR VF+            L   C +     EA
Sbjct: 60  IRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCAQHGRSQEA 119

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKAC-LGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           L  F +M   G +P++ +F   + AC  G + +   ++ H    +  ++  +    +L+ 
Sbjct: 120 LALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVS 179

Query: 286 LYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFT 345
           +Y+K G +  + + FE M + + + W+ MIA +A+    ++A+    +M    +     T
Sbjct: 180 MYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRRGLEALRTLQKMFLEGIRACSVT 239

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           +++++ A      L     IH  ++R G   DV   N ++++Y KCG ++++  +F    
Sbjct: 240 YITLMSAYDQPSQLKSARYIHDCILRTGFDQDVV--NVILNMYGKCGCLQDAEAMFKSMS 297

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
           + + + WNTMI  Y Q G   +A+  +  M EE V   + TY SV+ ACA+L  +E G Q
Sbjct: 298 QPDVIAWNTMIAAYSQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDACATLGDMEVGKQ 357

Query: 466 VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGL 525
           VH       + +   +AN+L++MY KCG +  AR +FD       V+WNAMI  Y+ H  
Sbjct: 358 VHRRLGDRAFQV-TELANSLVNMYGKCGILDVARSIFDKTAK-GSVTWNAMIGAYAQHSH 415

Query: 526 SAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYT 585
             +  ++F LM+  G  P+ +TF+ VLSAC+N GL E+  +YF  M  ++G+ P   HY 
Sbjct: 416 EQQAFELFLLMRLDGEEPSYITFMSVLSACANAGLPEEAHSYFVCMQQDHGVRPGGGHYG 475

Query: 586 SMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPE 645
            MV  LG+AG L  A  LI+G+PF+P V+ W + L  C  H +++ G+ +A+  +  +PE
Sbjct: 476 CMVESLGKAGRLSDAEALIQGMPFEPDVLTWTSFLANCRSHGDMKRGKFAAKGAIRIDPE 535

Query: 646 DEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHAD 694
               +V L+ I+A A  +++A+            K  G S I+    V+ F AGD S+  
Sbjct: 536 ASTGYVALARIHADAGDFQEASRIRKLMLDRGIRKNAGRSIIKLGTSVYEFTAGDQSNPR 595

Query: 695 MNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSS 754
              I   L+ L+ + ++AGY PD++ V  DV   +KE  L+ HSE+LA+AF +      +
Sbjct: 596 SKEIFDELKRLDKEMKRAGYDPDMTHVAHDVEAGQKEPLLFAHSERLAIAFGIISTSQGT 655

Query: 755 PIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           P+RI+KNLR+C DCH   K+ SKI +REII+RD +RFHHF++G CSC DFW
Sbjct: 656 PLRIMKNLRVCGDCHAMTKLTSKITRREIIVRDSNRFHHFKNGSCSCKDFW 706



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 203/382 (53%), Gaps = 7/382 (1%)

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
           V+++C  L  +   +  H    +     D+YV+  L+ +Y K G +  AR +FE  P K+
Sbjct: 40  VIQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKN 99

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC-ATMEGLDLGNQIH 366
           V  W+ +I   AQ   S +A+ LF  M +  + P+  +F + + AC A  E L  G  +H
Sbjct: 100 VFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALH 159

Query: 367 SLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVG 426
           +L+ R G    V  + +L+ +Y+KCG +E SV+ F    + N V+WN MI  + +     
Sbjct: 160 ALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRRGL 219

Query: 427 KAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALI 486
           +A+    KM  E + A  VTY +++ A    + L+    +H   ++  +D DVV  N ++
Sbjct: 220 EALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGFDQDVV--NVIL 277

Query: 487 DMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNL 546
           +MY KCG + DA  +F  M+  + ++WN MI+ YS HG ++E L+ ++LMQ+ G  P++ 
Sbjct: 278 NMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALRFYELMQEEGVVPDDY 337

Query: 547 TFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEG 606
           T+V V+ AC+  G +E G+   + +  +   +   E   S+V++ G+ G LD A  + + 
Sbjct: 338 TYVSVIDACATLGDMEVGKQVHRRL-GDRAFQ-VTELANSLVNMYGKCGILDVARSIFDK 395

Query: 607 IPFQPSVMIWRALLGACIIHNN 628
                  + W A++GA   H++
Sbjct: 396 TA--KGSVTWNAMIGAYAQHSH 415



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 129/488 (26%), Positives = 234/488 (47%), Gaps = 37/488 (7%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
           +QSC +   L     IH  + + G   D++ +N L+ +Y K   L +A  +F+  P +N 
Sbjct: 41  IQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNV 100

Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP---CV 179
            S+   I       +  EA+ LF  + ++G + +  +FTA +    S G  E  P    +
Sbjct: 101 FSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINA-CSAG-PEFLPAGRAL 158

Query: 180 FACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDCFE-------- 224
            A + + G        T+L+  +S CG +E + K F+ +       +N            
Sbjct: 159 HALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRRG 218

Query: 225 -EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
            EAL    +M   G +  + T+  ++ A      ++ A+  H C L+T ++ D  V   +
Sbjct: 219 LEALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGFDQD--VVNVI 276

Query: 284 LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
           L++Y K G + +A  +F+ M + DVI W+ MIA Y+Q   + +A+  +  M++  V P+ 
Sbjct: 277 LNMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALRFYELMQEEGVVPDD 336

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVRVG--LLSDVFVSNALMDVYAKCGRMENSVELF 401
           +T+VSV+ ACAT+  +++G Q+H    R+G        ++N+L+++Y KCG ++ +  +F
Sbjct: 337 YTYVSVIDACATLGDMEVGKQVHR---RLGDRAFQVTELANSLVNMYGKCGILDVARSIF 393

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
            ++ K   VTWN MI  Y Q     +A  +F  M  +    + +T+ SVL ACA+    E
Sbjct: 394 DKTAK-GSVTWNAMIGAYAQHSHEQQAFELFLLMRLDGEEPSYITFMSVLSACANAGLPE 452

Query: 462 PGMQVHCLTVKANYDMDVVVANA----LIDMYAKCGSITDAR-LVFDMMNDWNEVSWNAM 516
              + H   V    D  V         +++   K G ++DA  L+  M  + + ++W + 
Sbjct: 453 ---EAHSYFVCMQQDHGVRPGGGHYGCMVESLGKAGRLSDAEALIQGMPFEPDVLTWTSF 509

Query: 517 ISGYSMHG 524
           ++    HG
Sbjct: 510 LANCRSHG 517



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 151/284 (53%), Gaps = 5/284 (1%)

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
           V V+Q+CA +  L  G +IH L+ RVGL SDV+VSN L+ +Y KCG +E +  +F  +P 
Sbjct: 38  VRVIQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPA 97

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP-GMQ 465
           +N  +W  +I    Q G   +A+ +F +ML++ +    V++++ + AC++     P G  
Sbjct: 98  KNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRA 157

Query: 466 VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGL 525
           +H L  +  +   VV   +L+ MY+KCGS+ ++   F+ M + N VSWNAMI+ ++ H  
Sbjct: 158 LHALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRR 217

Query: 526 SAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYT 585
             E L+    M   G R  ++T++ ++SA      L+    Y    +   G +  +    
Sbjct: 218 GLEALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSAR-YIHDCILRTGFDQDV--VN 274

Query: 586 SMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNV 629
            ++++ G+ G L  A  + + +  QP V+ W  ++ A   H + 
Sbjct: 275 VILNMYGKCGCLQDAEAMFKSMS-QPDVIAWNTMIAAYSQHGHT 317



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 120/225 (53%), Gaps = 11/225 (4%)

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
           P+R     +T++    QLG++  A+      L+++  A       V+++CA L AL  G 
Sbjct: 3   PRR----LSTLLSKRQQLGQIAAAI----DALQKRKDADLKECVRVIQSCARLGALAEGR 54

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
           ++H L  +     DV V+N L+ MY KCGS+ +ARLVF+     N  SW  +I+  + HG
Sbjct: 55  RIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCAQHG 114

Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGG-LLEQGEAYFKSMVANYGIEPCIEH 583
            S E L +F  M ++G +P++++F   ++ACS G   L  G A   +++  YG +  +  
Sbjct: 115 RSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRA-LHALLRRYGFQDAVVA 173

Query: 584 YTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
            TS+VS+  + G L+++ K  E +  + + + W A++ A   H  
Sbjct: 174 TTSLVSMYSKCGSLEESVKTFESMT-ELNAVSWNAMIAAFAEHRR 217


>gi|449434296|ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
 gi|449479547|ref|XP_004155632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 638

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 213/569 (37%), Positives = 320/569 (56%), Gaps = 44/569 (7%)

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
           +A L + + S     A  I+  +    V   + MI  + + DL   ++ L+  M ++FVA
Sbjct: 70  LAFLAISSSSLPSDYALSIYNSISHPTVFATNNMIRCFVKGDLPRHSISLYSHMCRSFVA 129

Query: 341 -PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
            PN+ T   VLQAC+    +  G Q+ + V+++G + DVFV NAL+ +Y  C R+E++ +
Sbjct: 130 APNKHTLTFVLQACSNAFAIREGAQVQTHVIKLGFVKDVFVRNALIHLYCTCCRVESAKQ 189

Query: 400 LFAESPK-RNHVTWNTMIVGYVQLGEVG-------------------------------K 427
           +F E P  R+ V+WN+MIVG+V+LG++                                K
Sbjct: 190 VFDEVPSSRDVVSWNSMIVGFVRLGQISVAQKLFVEMPEKDVISWGTIISGCVQNGELEK 249

Query: 428 AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALID 487
           A+  F ++ E+++   E    S+L A A L  LE G ++H +     + M   +  AL+D
Sbjct: 250 ALDYFKELGEQKLRPNEAILVSLLAAAAQLGTLEYGKRIHSIANSLRFPMTASLGTALVD 309

Query: 488 MYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLT 547
           MYAKCG I ++R +FD M + ++ SWN MI G + HGL  E L +F+    +G+ P N+T
Sbjct: 310 MYAKCGCIDESRFLFDRMPEKDKWSWNVMICGLATHGLGQEALALFEKFLTQGFHPVNVT 369

Query: 548 FVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGI 607
           F+GVL+ACS  GL+ +G+ +FK M   YGIEP +EHY  MV LL RAG +  A ++I  +
Sbjct: 370 FIGVLTACSRAGLVSEGKHFFKLMTDTYGIEPEMEHYGCMVDLLSRAGFVYDAVEMINRM 429

Query: 608 PFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW---- 663
           P  P  ++W ++LG+C +H  +E+G      ++  +P     +V L+ I+A  R W    
Sbjct: 430 PAPPDPVLWASVLGSCQVHGFIELGEEIGNKLIQMDPTHNGHYVQLARIFARLRKWEDVS 489

Query: 664 -------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIP 716
                  E+ ++K  G S IE +G VH F AGD  H     I  MLE + ++   AGY  
Sbjct: 490 KVRRLMAERNSNKIAGWSLIEAEGRVHRFVAGDKEHERTTEIYKMLEIMGVRIAAAGYSA 549

Query: 717 DLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIIS 776
           ++S+VL D+ E+EKE  +  HSE+LA+AF L        IRIIKNLR+C DCH   KIIS
Sbjct: 550 NVSSVLHDIEEEEKENAIKEHSERLAIAFGLLVTKDGDCIRIIKNLRVCGDCHEVSKIIS 609

Query: 777 KIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            + +REII+RD  RFHHF+ G CSC D+W
Sbjct: 610 LVFEREIIVRDGSRFHHFKKGICSCQDYW 638



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 100/433 (23%), Positives = 174/433 (40%), Gaps = 70/433 (16%)

Query: 51  VSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDA 110
           V+  N H+    LQ+C     ++    +   V+K G   D+F  N L+++Y    R+  A
Sbjct: 128 VAAPNKHTLTFVLQACSNAFAIREGAQVQTHVIKLGFVKDVFVRNALIHLYCTCCRVESA 187

Query: 111 TKLFDEMPE-RNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
            ++FDE+P  R+ +S+ + I G+    Q   A  LF  +  +                  
Sbjct: 188 KQVFDEVPSSRDVVSWNSMIVGFVRLGQISVAQKLFVEMPEKD----------------V 231

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNF 229
           + W  +                            + GCV+          N   E+AL++
Sbjct: 232 ISWGTI----------------------------ISGCVQ----------NGELEKALDY 253

Query: 230 FSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK 289
           F ++     +PN      +L A   L T+   K  H  A    + M   +  AL+D+Y K
Sbjct: 254 FKELGEQKLRPNEAILVSLLAAAAQLGTLEYGKRIHSIANSLRFPMTASLGTALVDMYAK 313

Query: 290 SGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSV 349
            G I  +R +F+ MP+KD   W+ MI   A   L  +A+ LF +       P   TF+ V
Sbjct: 314 CGCIDESRFLFDRMPEKDKWSWNVMICGLATHGLGQEALALFEKFLTQGFHPVNVTFIGV 373

Query: 350 LQACATMEGLDLGNQIHSLVVRV-GLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KR 407
           L AC+    +  G     L+    G+  ++     ++D+ ++ G + ++VE+    P   
Sbjct: 374 LTACSRAGLVSEGKHFFKLMTDTYGIEPEMEHYGCMVDLLSRAGFVYDAVEMINRMPAPP 433

Query: 408 NHVTWNTM-----IVGYVQLG-EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
           + V W ++     + G+++LG E+G  +I          P     Y  + R  A L   E
Sbjct: 434 DPVLWASVLGSCQVHGFIELGEEIGNKLIQMD-------PTHNGHYVQLARIFARLRKWE 486

Query: 462 PGMQVHCLTVKAN 474
              +V  L  + N
Sbjct: 487 DVSKVRRLMAERN 499



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 116/245 (47%), Gaps = 13/245 (5%)

Query: 358 GLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT---WNT 414
           G+    Q H+ ++ +GL +D  +++ L+   A       S    +     +H T    N 
Sbjct: 43  GITQIKQAHARILVLGLANDGRITSHLLAFLAISSSSLPSDYALSIYNSISHPTVFATNN 102

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPA-TEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
           MI  +V+      ++ ++S M    V A  + T + VL+AC++  A+  G QV    +K 
Sbjct: 103 MIRCFVKGDLPRHSISLYSHMCRSFVAAPNKHTLTFVLQACSNAFAIREGAQVQTHVIKL 162

Query: 474 NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE-VSWNAMISGYSMHGLSAEVLKV 532
            +  DV V NALI +Y  C  +  A+ VFD +    + VSWN+MI G+   G  +   K+
Sbjct: 163 GFVKDVFVRNALIHLYCTCCRVESAKQVFDEVPSSRDVVSWNSMIVGFVRLGQISVAQKL 222

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
           F  M ++    + +++  ++S C   G LE+   YFK +    G +    +   +VSLL 
Sbjct: 223 FVEMPEK----DVISWGTIISGCVQNGELEKALDYFKEL----GEQKLRPNEAILVSLLA 274

Query: 593 RAGHL 597
            A  L
Sbjct: 275 AAAQL 279


>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 605

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 213/595 (35%), Positives = 345/595 (57%), Gaps = 19/595 (3%)

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           A  F   ++     PN      ++  C   ++ R        A+K+ ++ D+     L++
Sbjct: 15  AETFTKPLKIDTVNPNPPNPILLISKC---NSERELMQIQAYAIKS-HQEDVSFNTKLIN 70

Query: 286 LYTKS---GEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
             T+S     +S AR +F+ M + D++ ++ +   Y+++   ++   LF  + +  + P+
Sbjct: 71  FCTESPTESSMSYARHLFDAMSEPDIVIFNSIARGYSRSTNPLEVFNLFVEILEDDLLPD 130

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
            +TF S+L+ACA  + L+ G Q+H L +++G+  +V+V   L+++Y +C  ++ +  +F 
Sbjct: 131 NYTFPSLLKACAVAKALEEGRQLHCLSMKLGVDDNVYVCPTLINMYTECEDVDAARCVFD 190

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
              +   V +N MI GY +     +A+ +F +M  + +   E+T  SVL +CA L +L+ 
Sbjct: 191 RIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKNLKPNEITLLSVLSSCALLGSLDL 250

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G  +H    K  +   V V  ALIDM+AKCGS+ DA  +F+ M   +  +W+AMI  Y+ 
Sbjct: 251 GKWIHEYAKKHGFCKYVKVNTALIDMFAKCGSLDDAVSIFENMRYKDTQAWSAMIVAYAN 310

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
           HG +   + +F+ M+    +P+ +TF+G+L+ACS+ GL+E+G  YF  MV  +GI P I+
Sbjct: 311 HGQAENSMLMFERMRSENVQPDEITFLGLLNACSHTGLVEEGREYFSWMVHEFGIVPSIK 370

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDF 642
           HY SMV LLGRAGHL+ A + I+ +P  P+ M+WR LL AC  HNN+E+    ++ IL+ 
Sbjct: 371 HYGSMVDLLGRAGHLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLELAEKVSERILEL 430

Query: 643 EPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTS 691
           +      +V+LSN+YA  + WE           + A K PG S IE   +VH F +GD  
Sbjct: 431 DDSHGGDYVILSNLYARNKKWEAVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGV 490

Query: 692 HADMNIIRGMLEWLNMKSRKAGYIPDLSAVLR-DVREDEKERYLWVHSEKLALAFALFKM 750
            +    +   L+ +  + + AGY+PD S V+  D+ + EKE  L  HSEKLA+AF L   
Sbjct: 491 KSATTKLHRALDEMVKELKLAGYVPDTSMVVHADMGDQEKEITLRYHSEKLAIAFGLLNT 550

Query: 751 PPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           PP + IR++KNLR+C DCH+A K+IS I  R++++RDV RFHHF+DG CSC DFW
Sbjct: 551 PPGTTIRVVKNLRVCRDCHSAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCRDFW 605



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 148/313 (47%), Gaps = 17/313 (5%)

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A  LFD M E + + F +  +GY+ S+  +E   LF  +  +    + + F + LK    
Sbjct: 84  ARHLFDAMSEPDIVIFNSIARGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKACAV 143

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF------ 223
               E    +     KLG D N +V   LI+ ++ C  V+ AR VFD +   C       
Sbjct: 144 AKALEEGRQLHCLSMKLGVDDNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNAM 203

Query: 224 ----------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY 273
                      EAL+ F +M+    KPN  T   VL +C  L ++ + K  H  A K  +
Sbjct: 204 ITGYARRNRPNEALSLFREMQGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHGF 263

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
              + V  AL+D++ K G + +A  IFE M  KD   WS MI  YA    + +++ +F R
Sbjct: 264 CKYVKVNTALIDMFAKCGSLDDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFER 323

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS-LVVRVGLLSDVFVSNALMDVYAKCG 392
           MR   V P++ TF+ +L AC+    ++ G +  S +V   G++  +    +++D+  + G
Sbjct: 324 MRSENVQPDEITFLGLLNACSHTGLVEEGREYFSWMVHEFGIVPSIKHYGSMVDLLGRAG 383

Query: 393 RMENSVELFAESP 405
            +E++ E   + P
Sbjct: 384 HLEDAYEFIDKLP 396



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 122/273 (44%), Gaps = 29/273 (10%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +++++ + L++C     L+    +HC  +K G   +++    L+N+Y +   +  A  +F
Sbjct: 130 DNYTFPSLLKACAVAKALEEGRQLHCLSMKLGVDDNVYVCPTLINMYTECEDVDAARCVF 189

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS---MG 171
           D + E   + +   I GY   ++  EA+ LF  +  +G  L P   T  L VL S   +G
Sbjct: 190 DRIVEPCVVCYNAMITGYARRNRPNEALSLFREM--QGKNLKPNEIT-LLSVLSSCALLG 246

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-FNDC-------- 222
             +L   +     K G      V TALID F+ CG ++ A  +F+ + + D         
Sbjct: 247 SLDLGKWIHEYAKKHGFCKYVKVNTALIDMFAKCGSLDDAVSIFENMRYKDTQAWSAMIV 306

Query: 223 -------FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
                   E ++  F +MR+   +P+  TF  +L AC     +   +      +   +E 
Sbjct: 307 AYANHGQAENSMLMFERMRSENVQPDEITFLGLLNACSHTGLVEEGREYFSWMV---HEF 363

Query: 276 DLYVAV----ALLDLYTKSGEISNARRIFEEMP 304
            +  ++    +++DL  ++G + +A    +++P
Sbjct: 364 GIVPSIKHYGSMVDLLGRAGHLEDAYEFIDKLP 396


>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
 gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
          Length = 1124

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 221/581 (38%), Positives = 316/581 (54%), Gaps = 18/581 (3%)

Query: 240  PNNFTFAFVLKACLGLD-TIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
            P++ T    LK+   L   +R  +  H  +LK     + +V  +LL LY K G +  A+R
Sbjct: 547  PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 606

Query: 299  IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF---VAPNQFTFVSVLQACAT 355
            +F+EMP    +PW+ +I  Y       +AV +    R AF   + P+ FT V VL ACA 
Sbjct: 607  VFDEMPHPSTVPWTALITAYMDAGDLREAVHV---ARNAFANGMRPDSFTAVRVLTACAR 663

Query: 356  MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTM 415
            +  L  G  +     + G+   VFV+ A +D+Y KCG M  + E+F +   ++ V W  M
Sbjct: 664  IADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAM 723

Query: 416  IVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY 475
            + GY   G   +A+ +F  M  E +       +  L AC  L AL+ G Q   +     +
Sbjct: 724  VGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEF 783

Query: 476  DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDL 535
              + V+  ALIDMYAKCGS  +A +VF  M   + + WNAMI G  M G       +   
Sbjct: 784  LDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQ 843

Query: 536  MQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAG 595
            M++ G + N+ TF+G+L +C++ GL++ G  YF +M   Y I P IEHY  MV LL RAG
Sbjct: 844  MEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAG 903

Query: 596  HLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSN 655
             L +A +L++ +P   + +I  ALLG C IH N E+     + ++  EP +   +V+LSN
Sbjct: 904  LLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSN 963

Query: 656  IYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEW 704
            IY+    WE AA            K P  SW+E +G VH FR GD SH   + I   L+ 
Sbjct: 964  IYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDE 1023

Query: 705  LNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRI 764
            L ++ +  GY P    V+ DV ++EKE  L  HSEKLA+AF L    P   IR+ KNLR+
Sbjct: 1024 LGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRV 1083

Query: 765  CVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            C DCHTAIK++S+I  REII+RD +RFH F+DG CSC D+W
Sbjct: 1084 CSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 1124



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 192/415 (46%), Gaps = 26/415 (6%)

Query: 185 KLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDC----------------FEEALN 228
           KL   +N  V T+L+  ++ CG +  A++VFD + +                    EA++
Sbjct: 578 KLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVH 637

Query: 229 FFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYT 288
                 A G +P++FT   VL AC  +  +   ++    A +      ++VA A +DLY 
Sbjct: 638 VARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYV 697

Query: 289 KSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVS 348
           K GE++ AR +F++M  KD + W  M+  YA      +A++LF  M+   + P+ +    
Sbjct: 698 KCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAG 757

Query: 349 VLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRN 408
            L AC  +  LDLG Q   +V     L +  +  AL+D+YAKCG    +  +F +  K++
Sbjct: 758 ALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKD 817

Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ-VH 467
            + WN MI+G    G    A  +  +M +  V   + T+  +L +C     ++ G +  H
Sbjct: 818 IIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFH 877

Query: 468 CLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHG-- 524
            +T   +    +     ++D+ ++ G + +A +LV DM    N V   A++ G  +H   
Sbjct: 878 NMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNT 937

Query: 525 -LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
            L+  VLK   L++   W   N  +V + +  SN G  E        M A  G+E
Sbjct: 938 ELAEHVLKQLILLEP--WNSGN--YVMLSNIYSNRGRWEDAAKLRLDMKAK-GVE 987



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 162/367 (44%), Gaps = 27/367 (7%)

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
           L+    +H + LK  +  +      LL++Y K   L  A ++FDEMP  +T+ +   I  
Sbjct: 566 LRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITA 625

Query: 132 YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP--CVFACVYKLGHD 189
           Y  +    EAV +       G  + P +FTA   +      A+L     V+    + G  
Sbjct: 626 YMDAGDLREAVHVARNAFANG--MRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVA 683

Query: 190 SNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQM 233
            + FV TA +D +  CG +  AR+VFD +                 N    EAL+ F  M
Sbjct: 684 QSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAM 743

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
           +A G KP+ +  A  L AC  L  + + + A        +  +  +  AL+D+Y K G  
Sbjct: 744 QAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGST 803

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
             A  +F++M KKD+I W+ MI     T     A  L  +M ++ V  N  TF+ +L +C
Sbjct: 804 VEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSC 863

Query: 354 ATMEGL--DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
            T  GL  D     H++     +   +     ++D+ ++ G ++ + +L  + P    + 
Sbjct: 864 -THTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMP----MP 918

Query: 412 WNTMIVG 418
            N +I+G
Sbjct: 919 ANAVILG 925



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 114/268 (42%), Gaps = 19/268 (7%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +S +    L +C +  DL T  T+     ++G    +F     +++YVK   +  A ++F
Sbjct: 650 DSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVF 709

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D+M  ++ +++   + GY  +    EA+ LF  +  EG + + +A    L     +G  +
Sbjct: 710 DKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALD 769

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GLF 219
           L       V       N  +GTALID ++ CG    A  VF                GL 
Sbjct: 770 LGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLG 829

Query: 220 NDCFEE-ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
               E+ A     QM   G K N+ TF  +L +C     I+  +  +   +   Y +   
Sbjct: 830 MTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRR-YFHNMTKLYHISPR 888

Query: 279 VA--VALLDLYTKSGEISNARRIFEEMP 304
           +     ++DL +++G +  A ++ ++MP
Sbjct: 889 IEHYGCMVDLLSRAGLLQEAHQLVDDMP 916


>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
          Length = 1100

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 221/581 (38%), Positives = 316/581 (54%), Gaps = 18/581 (3%)

Query: 240  PNNFTFAFVLKACLGLD-TIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
            P++ T    LK+   L   +R  +  H  +LK     + +V  +LL LY K G +  A+R
Sbjct: 523  PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 582

Query: 299  IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF---VAPNQFTFVSVLQACAT 355
            +F+EMP    +PW+ +I  Y       +AV +    R AF   + P+ FT V VL ACA 
Sbjct: 583  VFDEMPHPSTVPWTALITAYMDAGDLREAVHV---ARNAFANGMRPDSFTAVRVLTACAR 639

Query: 356  MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTM 415
            +  L  G  +     + G+   VFV+ A +D+Y KCG M  + E+F +   ++ V W  M
Sbjct: 640  IADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAM 699

Query: 416  IVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANY 475
            + GY   G   +A+ +F  M  E +       +  L AC  L AL+ G Q   +     +
Sbjct: 700  VGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEF 759

Query: 476  DMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDL 535
              + V+  ALIDMYAKCGS  +A +VF  M   + + WNAMI G  M G       +   
Sbjct: 760  LDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQ 819

Query: 536  MQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAG 595
            M++ G + N+ TF+G+L +C++ GL++ G  YF +M   Y I P IEHY  MV LL RAG
Sbjct: 820  MEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAG 879

Query: 596  HLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSN 655
             L +A +L++ +P   + +I  ALLG C IH N E+     + ++  EP +   +V+LSN
Sbjct: 880  LLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSN 939

Query: 656  IYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEW 704
            IY+    WE AA            K P  SW+E +G VH FR GD SH   + I   L+ 
Sbjct: 940  IYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDE 999

Query: 705  LNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRI 764
            L ++ +  GY P    V+ DV ++EKE  L  HSEKLA+AF L    P   IR+ KNLR+
Sbjct: 1000 LGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRV 1059

Query: 765  CVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            C DCHTAIK++S+I  REII+RD +RFH F+DG CSC D+W
Sbjct: 1060 CSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 1100



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 192/415 (46%), Gaps = 26/415 (6%)

Query: 185 KLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDC----------------FEEALN 228
           KL   +N  V T+L+  ++ CG +  A++VFD + +                    EA++
Sbjct: 554 KLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVH 613

Query: 229 FFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYT 288
                 A G +P++FT   VL AC  +  +   ++    A +      ++VA A +DLY 
Sbjct: 614 VARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYV 673

Query: 289 KSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVS 348
           K GE++ AR +F++M  KD + W  M+  YA      +A++LF  M+   + P+ +    
Sbjct: 674 KCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAG 733

Query: 349 VLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRN 408
            L AC  +  LDLG Q   +V     L +  +  AL+D+YAKCG    +  +F +  K++
Sbjct: 734 ALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKD 793

Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ-VH 467
            + WN MI+G    G    A  +  +M +  V   + T+  +L +C     ++ G +  H
Sbjct: 794 IIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFH 853

Query: 468 CLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHG-- 524
            +T   +    +     ++D+ ++ G + +A +LV DM    N V   A++ G  +H   
Sbjct: 854 NMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNT 913

Query: 525 -LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
            L+  VLK   L++   W   N  +V + +  SN G  E        M A  G+E
Sbjct: 914 ELAEHVLKQLILLEP--WNSGN--YVMLSNIYSNRGRWEDAAKLRLDMKAK-GVE 963



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 162/367 (44%), Gaps = 27/367 (7%)

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
           L+    +H + LK  +  +      LL++Y K   L  A ++FDEMP  +T+ +   I  
Sbjct: 542 LRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITA 601

Query: 132 YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC--PCVFACVYKLGHD 189
           Y  +    EAV +       G  + P +FTA   +      A+L     V+    + G  
Sbjct: 602 YMDAGDLREAVHVARNAFANG--MRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVA 659

Query: 190 SNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQM 233
            + FV TA +D +  CG +  AR+VFD +                 N    EAL+ F  M
Sbjct: 660 QSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAM 719

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
           +A G KP+ +  A  L AC  L  + + + A        +  +  +  AL+D+Y K G  
Sbjct: 720 QAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGST 779

Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
             A  +F++M KKD+I W+ MI     T     A  L  +M ++ V  N  TF+ +L +C
Sbjct: 780 VEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSC 839

Query: 354 ATMEGL--DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
            T  GL  D     H++     +   +     ++D+ ++ G ++ + +L  + P    + 
Sbjct: 840 -THTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMP----MP 894

Query: 412 WNTMIVG 418
            N +I+G
Sbjct: 895 ANAVILG 901



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 114/268 (42%), Gaps = 19/268 (7%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +S +    L +C +  DL T  T+     ++G    +F     +++YVK   +  A ++F
Sbjct: 626 DSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVF 685

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D+M  ++ +++   + GY  +    EA+ LF  +  EG + + +A    L     +G  +
Sbjct: 686 DKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALD 745

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GLF 219
           L       V       N  +GTALID ++ CG    A  VF                GL 
Sbjct: 746 LGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLG 805

Query: 220 NDCFEE-ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
               E+ A     QM   G K N+ TF  +L +C     I+  +  +   +   Y +   
Sbjct: 806 MTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRR-YFHNMTKLYHISPR 864

Query: 279 VA--VALLDLYTKSGEISNARRIFEEMP 304
           +     ++DL +++G +  A ++ ++MP
Sbjct: 865 IEHYGCMVDLLSRAGLLQEAHQLVDDMP 892


>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g01510, mitochondrial; Flags: Precursor
 gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 584

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 216/557 (38%), Positives = 319/557 (57%), Gaps = 13/557 (2%)

Query: 262 KSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQT 321
           K  H   L+T +     +   LL+     G++  AR++F+EM K  +  W+ +   Y + 
Sbjct: 28  KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87

Query: 322 DLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVS 381
            L  +++ L+ +MR   V P++FT+  V++A + +     G  +H+ VV+ G      V+
Sbjct: 88  QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVA 147

Query: 382 NALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVP 441
             L+ +Y K G + ++  LF     ++ V WN  +   VQ G    A+  F+KM  + V 
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQ 207

Query: 442 ATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLV 501
               T  S+L AC  L +LE G +++    K   D +++V NA +DM+ KCG+   AR++
Sbjct: 208 FDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVL 267

Query: 502 FDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLL 561
           F+ M   N VSW+ MI GY+M+G S E L +F  MQ  G RPN +TF+GVLSACS+ GL+
Sbjct: 268 FEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLV 327

Query: 562 EQGEAYFKSMVA--NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRAL 619
            +G+ YF  MV   +  +EP  EHY  MV LLGR+G L++A + I+ +P +P   IW AL
Sbjct: 328 NEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGAL 387

Query: 620 LGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW---EKAASKEPGL--- 673
           LGAC +H ++ +G+  A  +++  P+  + HVLLSNIYA A  W   +K  SK   L   
Sbjct: 388 LGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTK 447

Query: 674 -----SWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVRED 728
                S +E +G +H+F  GD SH     I   L+ +  K RK GY+PD  +V  DV  +
Sbjct: 448 KVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEME 507

Query: 729 EKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDV 788
           EKE  L  HSEKLA+AF L K  P  PIR++KNLR C DCH   K +S +   EII+RD 
Sbjct: 508 EKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDK 567

Query: 789 HRFHHFQDGCCSCGDFW 805
           +RFHHF++G CSC +FW
Sbjct: 568 NRFHHFRNGVCSCKEFW 584



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 185/366 (50%), Gaps = 22/366 (6%)

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG-------LFNDCFE------- 224
           + A V + G      + T L++   V G + +AR+VFD        L+N  F+       
Sbjct: 30  IHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQL 89

Query: 225 --EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
             E+L  + +MR +G +P+ FT+ FV+KA   L       + H   +K  +     VA  
Sbjct: 90  PFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATE 149

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L+ +Y K GE+S+A  +FE M  KD++ W+  +A   QT  S  A+E F +M    V  +
Sbjct: 150 LVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFD 209

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
            FT VS+L AC  +  L++G +I+    +  +  ++ V NA +D++ KCG  E +  LF 
Sbjct: 210 SFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFE 269

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
           E  +RN V+W+TMIVGY   G+  +A+ +F+ M  E +    VT+  VL AC+    +  
Sbjct: 270 EMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNE 329

Query: 463 GMQVHCLTVKANYDMDVVVANA----LIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMI 517
           G +   L V++N D ++         ++D+  + G + +A   +  M  + +   W A++
Sbjct: 330 GKRYFSLMVQSN-DKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALL 388

Query: 518 SGYSMH 523
              ++H
Sbjct: 389 GACAVH 394



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 154/347 (44%), Gaps = 19/347 (5%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           IH  VL+ G          LL   V +  +  A ++FDEM +     + T  +GY  +  
Sbjct: 30  IHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQL 89

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
             E++ L+  +   G   + F +   +K +  +G       + A V K G      V T 
Sbjct: 90  PFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATE 149

Query: 198 LIDAFSVCGCVEFARKVFDGL-----------FNDCFEE-----ALNFFSQMRAVGFKPN 241
           L+  +   G +  A  +F+ +              C +      AL +F++M A   + +
Sbjct: 150 LVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFD 209

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
           +FT   +L AC  L ++ + +  +  A K   + ++ V  A LD++ K G    AR +FE
Sbjct: 210 SFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFE 269

Query: 302 EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL 361
           EM +++V+ WS MI  YA    S +A+ LF  M+   + PN  TF+ VL AC+    ++ 
Sbjct: 270 EMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNE 329

Query: 362 GNQIHSLVVRV---GLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           G +  SL+V+     L         ++D+  + G +E + E   + P
Sbjct: 330 GKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMP 376



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 87/200 (43%), Gaps = 8/200 (4%)

Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGM--QVHCLTVKANYDMDVVVANALIDMYAKC 492
           ML +Q P T+   S +LRA +S    +P    ++H + ++  +     +   L++     
Sbjct: 1   MLAKQTPLTKQMLSELLRASSS----KPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVI 56

Query: 493 GSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL 552
           G +  AR VFD M+      WN +  GY  + L  E L ++  M+  G RP+  T+  V+
Sbjct: 57  GDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVV 116

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
            A S  G    G A   + V  YG        T +V +  + G L  A  L E +  +  
Sbjct: 117 KAISQLGDFSCGFA-LHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVK-D 174

Query: 613 VMIWRALLGACIIHNNVEIG 632
           ++ W A L  C+   N  I 
Sbjct: 175 LVAWNAFLAVCVQTGNSAIA 194



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 3/123 (2%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           +F+S +  + L +C Q   L+    I+ +  K+    ++   N  L++++K      A  
Sbjct: 207 QFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARV 266

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           LF+EM +RN +S+ T I GY ++    EA+ LF+T+  EG   N   +  FL VL +   
Sbjct: 267 LFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPN---YVTFLGVLSACSH 323

Query: 173 AEL 175
           A L
Sbjct: 324 AGL 326


>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 749

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 227/663 (34%), Positives = 354/663 (53%), Gaps = 42/663 (6%)

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEA 226
           + K G   + FV T L++ +S CG +E A KVFD L                 N     A
Sbjct: 84  IVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLA 143

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           L  F +M   G  P+N+T   VL AC  L +I   K  H   +K   + D  +  +L   
Sbjct: 144 LQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSF 203

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y+K   +  A + F+ + +KDVI W+ +I+       +  ++  F  M    + PN++T 
Sbjct: 204 YSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTL 263

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
            SVL AC  M  LDLG QIHSL +++G  S + + N++M +Y KCG +  + +LF     
Sbjct: 264 TSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMET 323

Query: 407 RNHVTWNTMIVGYVQLGEVGK-----------AMIMFSKMLEEQVPATEVTYSSVLRACA 455
            N VTWN MI G+ ++ ++ +           A+ MF K+    +     T+SSVL  C+
Sbjct: 324 LNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCS 383

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
           +L ALE G Q+H   +K+    DVVV  AL+ MY KCGSI  A   F  M     +SW +
Sbjct: 384 NLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTS 443

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           MI+G++ HGLS + L++F+ M+  G +PN +TFVGVLSACS+ GL ++   YF+ M   Y
Sbjct: 444 MITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQY 503

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS 635
            I+P ++H+  ++ +  R G +++A  ++  + F+P+  IW  L+  C  H   ++G  +
Sbjct: 504 NIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYA 563

Query: 636 AQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHY 684
           A+ +L  +P+D  T+V L N++  A  W           E+   K    SWI  +  V+ 
Sbjct: 564 AEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYS 623

Query: 685 FRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYL---WVHSEKL 741
           F+  D SH     +  +LE +  + +  GY P +  V    +E+ +ER L    +HSEKL
Sbjct: 624 FKPNDKSHCQSLEMYKLLETVLNEVKALGYEP-IEDVEVIEKEENEERVLSSTVLHSEKL 682

Query: 742 ALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSC 801
           A+AF L  +P ++PIR++K++ +C DCH  I+ IS +  REI+IRD  + H F +G CSC
Sbjct: 683 AIAFGLLNLPTATPIRVVKSITMCRDCHNFIRFISLLKGREIVIRDSKQLHKFLNGYCSC 742

Query: 802 GDF 804
           G +
Sbjct: 743 GGY 745



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 157/539 (29%), Positives = 264/539 (48%), Gaps = 34/539 (6%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           +   S  Y   LQ CI  +    A  IH  ++K G   DLF    L+NVY K   +  A 
Sbjct: 54  TRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAH 113

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
           K+FD +P RN  ++ T + GY  +S  + A+ LF  +   G   + +     L    S+ 
Sbjct: 114 KVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQ 173

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-----------GLFN 220
             E    V A + K   D +  +G +L   +S    +EFA K F             + +
Sbjct: 174 SIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVIS 233

Query: 221 DCFE-----EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
            C +      +L+FF  M + G KPN +T   VL AC  + T+ +    H  ++K  Y  
Sbjct: 234 SCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGS 293

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQ-TDLSID-------- 326
            + +  +++ LY K G +  A+++FE M   +++ W+ MIA +A+  DL+ D        
Sbjct: 294 SILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSG 353

Query: 327 --AVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNAL 384
             A+ +F ++ ++ + P+ FTF SVL  C+ +  L+ G QIH  +++ G+L+DV V  AL
Sbjct: 354 STALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTAL 413

Query: 385 MDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATE 444
           + +Y KCG ++ + + F E P R  ++W +MI G+ + G   +A+ +F  M    +   +
Sbjct: 414 VSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQ 473

Query: 445 VTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDARLVF 502
           VT+  VL AC S A L      +   ++  Y++  V+ +   LIDMY + G + +A  V 
Sbjct: 474 VTFVGVLSAC-SHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVV 532

Query: 503 DMMN-DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNL-TFVGVLSACSNGG 559
             MN + NE  W+ +I+G   HG S   L  +   Q    +P ++ T+V +L+   + G
Sbjct: 533 HKMNFEPNETIWSMLIAGCRSHGKSD--LGFYAAEQLLKLKPKDVETYVSLLNMHISAG 589



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 225/407 (55%), Gaps = 19/407 (4%)

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
           +L+ C+  +    A+  HG  +KT +  DL+V   L+++Y+K G + +A ++F+ +P+++
Sbjct: 64  LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRN 123

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
           V  W+ ++  Y Q    + A++LF +M +A   P+ +T   VL AC++++ ++ G Q+H+
Sbjct: 124 VNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHA 183

Query: 368 LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK 427
            +++  +  D  + N+L   Y+K  R+E +++ F    +++ ++W ++I      G+  +
Sbjct: 184 YLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAAR 243

Query: 428 AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALID 487
           ++  F  ML + +   E T +SVL AC  +  L+ G Q+H L++K  Y   +++ N+++ 
Sbjct: 244 SLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMY 303

Query: 488 MYAKCGSITDARLVFDMMNDWNEVSWNAMISGY-----------SMHGLSAEVLKVFDLM 536
           +Y KCG + +A+ +F+ M   N V+WNAMI+G+           + H   +  L +F  +
Sbjct: 304 LYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKL 363

Query: 537 QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGH 596
            + G +P+  TF  VLS CSN   LEQGE     ++ + G+   +   T++VS+  + G 
Sbjct: 364 YRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKS-GVLADVVVGTALVSMYNKCGS 422

Query: 597 LDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFE 643
           +DKA+K    +P + +++ W +++     H       LS Q +  FE
Sbjct: 423 IDKASKAFLEMPSR-TMISWTSMITGFARHG------LSQQALQLFE 462



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 162/347 (46%), Gaps = 24/347 (6%)

Query: 325 IDAVE--LFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSN 382
           +DA E  L  R+  ++  P       +LQ C           IH  +V+ G   D+FV  
Sbjct: 45  VDAEEPKLGTRIESSYYFP-------LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMT 97

Query: 383 ALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPA 442
            L++VY+KCG ME++ ++F   P+RN   W T++ GYVQ      A+ +F KMLE     
Sbjct: 98  FLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYP 157

Query: 443 TEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVF 502
           +  T   VL AC+SL ++E G QVH   +K + D D  + N+L   Y+K   +  A   F
Sbjct: 158 SNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAF 217

Query: 503 DMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLE 562
            ++ + + +SW ++IS    +G +A  L  F  M   G +PN  T   VLSAC     L+
Sbjct: 218 KIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLD 277

Query: 563 QGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
            G A   S+    G    I    S++ L  + G L +A KL EG+    +++ W A++  
Sbjct: 278 LG-AQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGME-TLNLVTWNAMIAG 335

Query: 623 CIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAASK 669
                           ++D   +D A H   S   AM +   ++  K
Sbjct: 336 -------------HAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMK 369


>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
 gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
          Length = 716

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 226/709 (31%), Positives = 378/709 (53%), Gaps = 46/709 (6%)

Query: 139 VEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTAL 198
           ++A+ L+  +   G   + F  T+ +     +   E    +   +   G  ++  + TAL
Sbjct: 12  LQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETAL 71

Query: 199 IDAFSVCGCVEFARKVFDGL-FNDCF---------------EEALNFFSQMRAVGFKPNN 242
           +  ++ CG ++ A++VF+G+   D F               E A+  + +M A G +PN 
Sbjct: 72  LQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVEPNV 131

Query: 243 FTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEE 302
            TFA  L  C  +  +   ++ H   L +    D  +  +LL++Y K  E+  AR++FE 
Sbjct: 132 VTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEG 191

Query: 303 MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA-FVAPNQFTFVSVLQACATMEGLDL 361
           M  ++V  ++ MI+ Y Q     +A+ELF RM +   + PN +TF ++L A   +  L+ 
Sbjct: 192 MKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEK 251

Query: 362 GNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQ 421
           G ++H  +   G  ++V V NAL+ +Y KCG    + ++F     RN ++W +MI  Y Q
Sbjct: 252 GRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQ 311

Query: 422 LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVV 481
            G   +A+ +F +M    V  + V++SS L ACA L AL+ G ++H   V+AN      +
Sbjct: 312 HGNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEANL-ASPQM 367

Query: 482 ANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW 541
             +L+ MYA+CGS+ DAR VF+ M   +  S NAMI+ ++ HG   + L+++  M+Q G 
Sbjct: 368 ETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGI 427

Query: 542 RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAA 601
             + +TFV VL ACS+  L+     + +S+V ++G+ P +EHY  MV +LGR+G L  A 
Sbjct: 428 PADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAE 487

Query: 602 KLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMAR 661
           +L+E +P+Q   + W  LL  C  H +++ G  +A+ + +  P +   +V LSN+YA A+
Sbjct: 488 ELVETMPYQADAVAWMTLLSGCKRHGDLDRGERAARKVFELAPAETLPYVFLSNMYAAAK 547

Query: 662 SW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHAD-------MNIIRGMLE 703
            +           E+  ++   +S+IE    +H F +G             M  +R +L 
Sbjct: 548 RFDDARRVRKEMEERGVTRPVAVSYIEIDNELHMFTSGGRDEQQEGHDGRTMERVRSLLV 607

Query: 704 WLNMKSRKAGYIPDLSAVLRD----VREDEKERYLWVHSEKLALAFALF--KMPPSS-PI 756
            L    ++AGY+PD   V  +      E+EK+R L  HSE+LA+A+ L   K P  S P+
Sbjct: 608 ELLEPMKQAGYVPDTREVYLEQQGVTSEEEKQRSLCFHSERLAIAYGLIAAKDPDDSRPL 667

Query: 757 RIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           R++ + R+C  CH+AIK++S I ++ I +RD  RFHHF+ G CSCGD W
Sbjct: 668 RVVNSHRVCSGCHSAIKLLSDITEKRIFVRDGSRFHHFEKGACSCGDHW 716



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 175/332 (52%), Gaps = 4/332 (1%)

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
           MIA   +    + A+EL+  M +  +  ++F   S++ AC  ++ L+ G ++H  ++  G
Sbjct: 1   MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
             +D+ +  AL+ +YAKCG ++++  +F     ++   W+++I  Y + G    A++++ 
Sbjct: 61  FRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYR 120

Query: 434 KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCG 493
           +M+ E V    VT++  L  CAS+A L  G  +H   + +    D V+ ++L++MY KC 
Sbjct: 121 RMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCD 180

Query: 494 SITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ-RGWRPNNLTFVGVL 552
            + +AR VF+ M   N  S+ AMIS Y   G  AE L++F  M +     PN  TF  +L
Sbjct: 181 EMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATIL 240

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
            A    G LE+G    + + A+ G +  +    ++V++ G+ G   +A K+ + +  + +
Sbjct: 241 GAVEGLGNLEKGRKVHRHL-ASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTAR-N 298

Query: 613 VMIWRALLGACIIHNNVEIGRLSAQHILDFEP 644
           V+ W +++ A   H N +   L+    +D EP
Sbjct: 299 VISWTSMIAAYAQHGNPQEA-LNLFKRMDVEP 329



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 190/417 (45%), Gaps = 30/417 (7%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N  ++A +L  C     L     IH ++L      D    + LLN+Y+K + + +A K
Sbjct: 128 EPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARK 187

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHR-EGHELNPFAFTAFLKVLVSMG 171
           +F+ M  RN  S+   I  Y  + +  EA+ LFS + + E  E N + F   L  +  +G
Sbjct: 188 VFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLG 247

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------------ 219
             E    V   +   G D+N  V  AL+  +  CG    ARKVFD +             
Sbjct: 248 NLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIA 307

Query: 220 ----NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
               +   +EALN F +M     +P+  +F+  L AC  L  +   +  H        E 
Sbjct: 308 AYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIH----HRVVEA 360

Query: 276 DL---YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFC 332
           +L    +  +LL +Y + G + +ARR+F  M  +D    + MIA + Q      A+ ++ 
Sbjct: 361 NLASPQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYR 420

Query: 333 RMRQAFVAPNQFTFVSVLQACA-TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC 391
           +M Q  +  +  TFVSVL AC+ T    D  + + SLV+  G++  V     ++DV  + 
Sbjct: 421 KMEQEGIPADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRS 480

Query: 392 GRMENSVELFAESP-KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTY 447
           GR+ ++ EL    P + + V W T++ G  + G++ +      K+  E  PA  + Y
Sbjct: 481 GRLGDAEELVETMPYQADAVAWMTLLSGCKRHGDLDRGERAARKVF-ELAPAETLPY 536


>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 755

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 227/663 (34%), Positives = 354/663 (53%), Gaps = 42/663 (6%)

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEA 226
           + K G   + FV T L++ +S CG +E A KVFD L                 N     A
Sbjct: 90  IVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLA 149

Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
           L  F +M   G  P+N+T   VL AC  L +I   K  H   +K   + D  +  +L   
Sbjct: 150 LQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSF 209

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           Y+K   +  A + F+ + +KDVI W+ +I+       +  ++  F  M    + PN++T 
Sbjct: 210 YSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTL 269

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
            SVL AC  M  LDLG QIHSL +++G  S + + N++M +Y KCG +  + +LF     
Sbjct: 270 TSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMET 329

Query: 407 RNHVTWNTMIVGYVQLGEVGK-----------AMIMFSKMLEEQVPATEVTYSSVLRACA 455
            N VTWN MI G+ ++ ++ +           A+ MF K+    +     T+SSVL  C+
Sbjct: 330 LNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCS 389

Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
           +L ALE G Q+H   +K+    DVVV  AL+ MY KCGSI  A   F  M     +SW +
Sbjct: 390 NLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTS 449

Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
           MI+G++ HGLS + L++F+ M+  G +PN +TFVGVLSACS+ GL ++   YF+ M   Y
Sbjct: 450 MITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQY 509

Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS 635
            I+P ++H+  ++ +  R G +++A  ++  + F+P+  IW  L+  C  H   ++G  +
Sbjct: 510 NIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYA 569

Query: 636 AQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHY 684
           A+ +L  +P+D  T+V L N++  A  W           E+   K    SWI  +  V+ 
Sbjct: 570 AEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYS 629

Query: 685 FRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLW---VHSEKL 741
           F+  D SH     +  +LE +  + +  GY P +  V    +E+ +ER L    +HSEKL
Sbjct: 630 FKPNDKSHCQSLEMYKLLETVLNEVKALGYEP-IEDVEVIEKEENEERVLSSTVLHSEKL 688

Query: 742 ALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSC 801
           A+AF L  +P ++PIR++K++ +C DCH  I+ IS +  REI+IRD  + H F +G CSC
Sbjct: 689 AIAFGLLNLPTATPIRVVKSITMCRDCHNFIRFISLLKGREIVIRDSKQLHKFLNGYCSC 748

Query: 802 GDF 804
           G +
Sbjct: 749 GGY 751



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 157/539 (29%), Positives = 264/539 (48%), Gaps = 34/539 (6%)

Query: 52  SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
           +   S  Y   LQ CI  +    A  IH  ++K G   DLF    L+NVY K   +  A 
Sbjct: 60  TRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAH 119

Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
           K+FD +P RN  ++ T + GY  +S  + A+ LF  +   G   + +     L    S+ 
Sbjct: 120 KVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQ 179

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-----------GLFN 220
             E    V A + K   D +  +G +L   +S    +EFA K F             + +
Sbjct: 180 SIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVIS 239

Query: 221 DCFE-----EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
            C +      +L+FF  M + G KPN +T   VL AC  + T+ +    H  ++K  Y  
Sbjct: 240 SCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGS 299

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQ-TDLSID-------- 326
            + +  +++ LY K G +  A+++FE M   +++ W+ MIA +A+  DL+ D        
Sbjct: 300 SILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSG 359

Query: 327 --AVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNAL 384
             A+ +F ++ ++ + P+ FTF SVL  C+ +  L+ G QIH  +++ G+L+DV V  AL
Sbjct: 360 STALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTAL 419

Query: 385 MDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATE 444
           + +Y KCG ++ + + F E P R  ++W +MI G+ + G   +A+ +F  M    +   +
Sbjct: 420 VSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQ 479

Query: 445 VTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDARLVF 502
           VT+  VL AC S A L      +   ++  Y++  V+ +   LIDMY + G + +A  V 
Sbjct: 480 VTFVGVLSAC-SHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVV 538

Query: 503 DMMN-DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNL-TFVGVLSACSNGG 559
             MN + NE  W+ +I+G   HG S   L  +   Q    +P ++ T+V +L+   + G
Sbjct: 539 HKMNFEPNETIWSMLIAGCRSHGKSD--LGFYAAEQLLKLKPKDVETYVSLLNMHISAG 595



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 225/407 (55%), Gaps = 19/407 (4%)

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
           +L+ C+  +    A+  HG  +KT +  DL+V   L+++Y+K G + +A ++F+ +P+++
Sbjct: 70  LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRN 129

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
           V  W+ ++  Y Q    + A++LF +M +A   P+ +T   VL AC++++ ++ G Q+H+
Sbjct: 130 VNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHA 189

Query: 368 LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK 427
            +++  +  D  + N+L   Y+K  R+E +++ F    +++ ++W ++I      G+  +
Sbjct: 190 YLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAAR 249

Query: 428 AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALID 487
           ++  F  ML + +   E T +SVL AC  +  L+ G Q+H L++K  Y   +++ N+++ 
Sbjct: 250 SLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMY 309

Query: 488 MYAKCGSITDARLVFDMMNDWNEVSWNAMISGY-----------SMHGLSAEVLKVFDLM 536
           +Y KCG + +A+ +F+ M   N V+WNAMI+G+           + H   +  L +F  +
Sbjct: 310 LYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKL 369

Query: 537 QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGH 596
            + G +P+  TF  VLS CSN   LEQGE     ++ + G+   +   T++VS+  + G 
Sbjct: 370 YRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKS-GVLADVVVGTALVSMYNKCGS 428

Query: 597 LDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFE 643
           +DKA+K    +P + +++ W +++     H       LS Q +  FE
Sbjct: 429 IDKASKAFLEMPSR-TMISWTSMITGFARHG------LSQQALQLFE 468



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 162/347 (46%), Gaps = 24/347 (6%)

Query: 325 IDAVE--LFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSN 382
           +DA E  L  R+  ++  P       +LQ C           IH  +V+ G   D+FV  
Sbjct: 51  VDAEEPKLGTRIESSYYFP-------LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMT 103

Query: 383 ALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPA 442
            L++VY+KCG ME++ ++F   P+RN   W T++ GYVQ      A+ +F KMLE     
Sbjct: 104 FLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYP 163

Query: 443 TEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVF 502
           +  T   VL AC+SL ++E G QVH   +K + D D  + N+L   Y+K   +  A   F
Sbjct: 164 SNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAF 223

Query: 503 DMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLE 562
            ++ + + +SW ++IS    +G +A  L  F  M   G +PN  T   VLSAC     L+
Sbjct: 224 KIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLD 283

Query: 563 QGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
            G A   S+    G    I    S++ L  + G L +A KL EG+    +++ W A++  
Sbjct: 284 LG-AQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGME-TLNLVTWNAMIAG 341

Query: 623 CIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAASK 669
                           ++D   +D A H   S   AM +   ++  K
Sbjct: 342 -------------HAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMK 375


>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
 gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
          Length = 665

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 229/646 (35%), Positives = 344/646 (53%), Gaps = 81/646 (12%)

Query: 241 NNFTFAFVLKACLGLDTIRVA------KSAHGCALKTCYEMDLYVAVALLDLYTKS--GE 292
           N FT     K  L L   + +      K  H  AL+T +  D YV+  L+  Y       
Sbjct: 20  NKFTSQLSQKTILDLLNTKSSTSLHHLKQVHAVALRTGHFQDHYVSGTLVKCYANPHFSN 79

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           ++ A ++FE +P  +V  ++ +I    Q +    A+  + +M  A   PN+FT+ ++ +A
Sbjct: 80  LNFALKVFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKA 139

Query: 353 CATMEGLDLGNQIHSLVVRVGLLSDVFVS------------------------------- 381
           C   E  + G Q+H+ V++ GL  DV +                                
Sbjct: 140 CTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICF 199

Query: 382 NALMDVY-------------------------------AKCGRMENSVELFAESPKRNHV 410
           NA++D Y                               AKCG +E + ELF E  ++N +
Sbjct: 200 NAMIDGYLKCGEVEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEI 259

Query: 411 TWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLT 470
           +W+ MI GY++ G   +A+ +F+ M  E++   +   SSVL ACA+L AL+ G  +H   
Sbjct: 260 SWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYV 319

Query: 471 VKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVL 530
              +   D V+  AL+DMYAKCG +  A  VF+ M      +WNAMI G  MHG + + +
Sbjct: 320 NNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAI 379

Query: 531 KVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSL 590
           ++F  MQ++ +RPN +T +GVLSAC++ G++++G   F SM   YGIEP +EHY  +V L
Sbjct: 380 ELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDL 439

Query: 591 LGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATH 650
           LGRAG L +A +++  +P +PS  +W ALLGAC  H +VE+G    + +L+ EP++   +
Sbjct: 440 LGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRY 499

Query: 651 VLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIR 699
            LLSNIYA A  W           E+      G+S I+  G+VH F+ GD SH  M  I 
Sbjct: 500 ALLSNIYARAGRWDDVANVRKLMKERGVKTSTGISMIDFDGVVHEFKMGDGSHPQMKNIY 559

Query: 700 GMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRII 759
            ML+ +  + +  G+ P+ S VL D+ E+EKE  L  HSEKLA+AF L    P + I ++
Sbjct: 560 LMLKNMIKRLKMEGFSPNTSQVLFDIEEEEKEAELQYHSEKLAIAFGLINTKPGTTIHVV 619

Query: 760 KNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           KNLR+C DCH+A K+IS++  REII+RD  R+HHF+ G CSC DFW
Sbjct: 620 KNLRMCEDCHSAFKLISQVYDREIIVRDRARYHHFKTGTCSCKDFW 665



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 104/233 (44%), Gaps = 29/233 (12%)

Query: 95  NVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHE 154
           NV+++   K   + +A +LF+EM E+N IS+   I GY     + EA+ +F+ + RE   
Sbjct: 231 NVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIR 290

Query: 155 LNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKV 214
              F  ++ L    ++G  +    + A V    +  +A +GTAL+D ++ CG ++ A  V
Sbjct: 291 PRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDV 350

Query: 215 FDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL----- 253
           F+ +                 +   E+A+  F +M+   F+PN  T   VL AC      
Sbjct: 351 FEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMV 410

Query: 254 --GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
             GL      +  +G        M+ Y  V  +DL  ++G +  A  +   MP
Sbjct: 411 DEGLRIFNSMEEVYGIEPG----MEHYGCV--VDLLGRAGLLGEAEEVMYSMP 457


>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 642

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 225/624 (36%), Positives = 323/624 (51%), Gaps = 84/624 (13%)

Query: 228 NFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLY 287
           N    + A G  P   ++A V +   GL+ +++    H   L    +    V   ++  Y
Sbjct: 57  NLLQPLSAPG-PPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFY 115

Query: 288 TKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFV 347
             SG+I ++  +F              I  Y                         FTF 
Sbjct: 116 ASSGDIDSSVSVFNG------------IGDY-------------------------FTFP 138

Query: 348 SVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS---------- 397
            VL++   +  + +G  +H L++R+GL  D++V+ +L+ +Y KCG + ++          
Sbjct: 139 FVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIR 198

Query: 398 ---------------------VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML 436
                                + +F   P RN V+W TMI GY Q G   +A+ +F +M+
Sbjct: 199 DVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMV 258

Query: 437 EEQ--VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGS 494
           +E   V    VT  SVL ACA L+ LE G Q+H L  +   + +  V  AL  MYAKCGS
Sbjct: 259 KEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGS 318

Query: 495 ITDARLVFDMMN--DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL 552
           + DAR  FD +N  + N ++WN MI+ Y+ +G   + +  F  M Q G +P+++TF G+L
Sbjct: 319 LVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLL 378

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
           S CS+ GL++ G  YF  M   Y I P +EHY  +  LLGRAG L +A+KL+  +P    
Sbjct: 379 SGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAG 438

Query: 613 VMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE-------- 664
             IW +LL AC  H N+E+   +A+ +   EPE+   +VLLSN+YA A  W+        
Sbjct: 439 PSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAI 498

Query: 665 ---KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAV 721
              +   K PG SWIE  G  H F  GDTSH     I   LE L  K + AGY PD S V
Sbjct: 499 VKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYV 558

Query: 722 LRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQR 781
           L D+ E+EKE  L  HSEKLA+AF +   P  + +R+ KNLRIC DCHTA+  IS+I  R
Sbjct: 559 LHDISEEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGR 618

Query: 782 EIIIRDVHRFHHFQDGCCSCGDFW 805
           E+I+RD++RFHHF+ GCCSCGD+W
Sbjct: 619 EVIVRDINRFHHFKGGCCSCGDYW 642



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 115/448 (25%), Positives = 206/448 (45%), Gaps = 64/448 (14%)

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
            D +P  ++  F  +I   T+S+       L   L   G      ++    + L  +   
Sbjct: 31  IDTVPPPSSPPFKCSISPLTISATLQN---LLQPLSAPGPP-PILSYAPVFQFLTGLNML 86

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQM 233
           +L   V A +   G    A VG+ ++  ++  G ++ +  VF+G+               
Sbjct: 87  KLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGI--------------- 131

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
                  + FTF FVLK+ + L ++ + K  HG  L+   + DLYVA +L+ LY K GEI
Sbjct: 132 ------GDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEI 185

Query: 294 SNARR-------------------------------IFEEMPKKDVIPWSFMIARYAQTD 322
           ++A +                               IFE MP ++++ W+ MI+ Y+Q+ 
Sbjct: 186 NDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSG 245

Query: 323 LSIDAVELFCRM--RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFV 380
           L+  A+ LF  M    + V PN  T +SVL ACA +  L+ G QIH L  R+GL S+  V
Sbjct: 246 LAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASV 305

Query: 381 SNALMDVYAKCGRMENSVELFAE--SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE 438
             AL  +YAKCG + ++   F +    ++N + WNTMI  Y   G   +A+  F +M++ 
Sbjct: 306 LIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQA 365

Query: 439 QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSIT 496
            +   ++T++ +L  C+    ++ G++ +   +   Y ++  V +   + D+  + G + 
Sbjct: 366 GIQPDDITFTGLLSGCSHSGLVDVGLK-YFNHMSTTYSINPRVEHYACVADLLGRAGRLA 424

Query: 497 DA-RLVFDMMNDWNEVSWNAMISGYSMH 523
           +A +LV +M        W ++++    H
Sbjct: 425 EASKLVGEMPMPAGPSIWGSLLAACRKH 452



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 83/351 (23%), Positives = 144/351 (41%), Gaps = 63/351 (17%)

Query: 14  QLTHQSKINAWLRGLSAQAALSTQQCS-NSTTTPITFSVSEFNS----HSYATSLQSCIQ 68
           +L HQ   +  LRGL   A + ++  +  +++  I  SVS FN      ++   L+S ++
Sbjct: 87  KLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGDYFTFPFVLKSSVE 146

Query: 69  NDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFD------------- 115
              +     +H  +L+ G   DL+    L+ +Y K   + DA K+FD             
Sbjct: 147 LLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNAL 206

Query: 116 ------------------EMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNP 157
                              MP RN +S+ T I GY+ S    +A+ LF  + +E   + P
Sbjct: 207 LAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRP 266

Query: 158 --FAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF 215
                 + L     +   E    +     ++G +SNA V  AL   ++ CG +  AR  F
Sbjct: 267 NWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCF 326

Query: 216 DGL---------FNDCFE---------EALNFFSQMRAVGFKPNNFTFAFVLKAC--LGL 255
           D L         +N             +A++ F +M   G +P++ TF  +L  C   GL
Sbjct: 327 DKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGL 386

Query: 256 DTIRVAKSAHGCALKTCYEMDLYVA--VALLDLYTKSGEISNARRIFEEMP 304
             + +    H   + T Y ++  V     + DL  ++G ++ A ++  EMP
Sbjct: 387 VDVGLKYFNH---MSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMP 434


>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
          Length = 734

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 212/635 (33%), Positives = 338/635 (53%), Gaps = 55/635 (8%)

Query: 198 LIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRAVGFKPN 241
           L+  +  CG     +KVFD +                 N   E+A+  FS M+A G +PN
Sbjct: 128 LLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPN 187

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
           +  +  +L++CLG   + + K  H   ++     ++ V  A+ ++Y + G +  A+ +F+
Sbjct: 188 SAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFD 247

Query: 302 EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL 361
            M  ++ + W+ ++  Y Q      A+ELF RM    V  ++F F  VL+ C  +E  D+
Sbjct: 248 GMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDM 307

Query: 362 GNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQ 421
           G QIHS +V++G  S+V V   L+D Y KCG +E++   F    + N V+W+ +I G+ Q
Sbjct: 308 GKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQ 367

Query: 422 LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVV 481
            G +   + +F+ +  E V      Y+SV +ACA+ A L  G Q H   +K      +  
Sbjct: 368 SGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYG 427

Query: 482 ANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW 541
            +A++ MY+KCG +  AR  F+ +++ + V+W A+ISGY+ HG +AE L  F  MQ  G 
Sbjct: 428 ESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGV 487

Query: 542 RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAA 601
           RPN +TF+ VL+ACS+ GL+ + + Y  SM  +YG++P I+HY  M+    RAG L +A 
Sbjct: 488 RPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLXEAL 547

Query: 602 KLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMAR 661
           +LI  +PF+P  M W++LLG C  H ++++G+++A+++   +P D A ++LL N+Y+   
Sbjct: 548 ELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFG 607

Query: 662 SWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSR 710
            WE+A             KE   SWI  +G VH                  +  LN +  
Sbjct: 608 KWEEAGHVRKLMAERELKKEVSCSWISVKGQVHR----------------PVRLLNEEDD 651

Query: 711 KAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHT 770
            +  +P     L D            HSEKLA+AF L     ++PI + KNLR C DCH 
Sbjct: 652 VSCSLPARKEQLLD------------HSEKLAIAFGLISTEDNAPILVFKNLRACRDCHE 699

Query: 771 AIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
             K +S +  R+I++RD  RFHHF+ G CSC D+W
Sbjct: 700 FGKQVSMVTGRQIVVRDSTRFHHFKSGKCSCNDYW 734



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 209/412 (50%), Gaps = 14/412 (3%)

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
            +EA +F  +M          ++  + +AC  L ++   +  H    +T       +   
Sbjct: 68  LKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENC 127

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           LL +Y   G   + +++F+EM  K+++ W  +I+ YA+      A+ LF  M+ + + PN
Sbjct: 128 LLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPN 187

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
              ++S+LQ+C     L+LG Q+HS V+R  L +++ V  A+ ++Y +CG +E +  +F 
Sbjct: 188 SAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFD 247

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
               +N VTW  ++VGY Q  ++  A+ +F++M  E V   E  +S VL+ C  L   + 
Sbjct: 248 GMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDM 307

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G Q+H   VK   + +V V   L+D Y KCG I  A   F  +++ N+VSW+A+ISG+S 
Sbjct: 308 GKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQ 367

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS-----NGGLLEQGEAYFKSMVAN-YG 576
            G   + +K+F  ++  G   N+  +  V  AC+     N G    G+A  + +V+  YG
Sbjct: 368 SGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYG 427

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
                   ++MV++  + G LD A +  E I  +P  + W A++     H N
Sbjct: 428 -------ESAMVTMYSKCGRLDYARRAFESID-EPDAVAWTAIISGYAYHGN 471



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 130/486 (26%), Positives = 234/486 (48%), Gaps = 20/486 (4%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
           HSY    ++C +   L     IH ++ +          N LL +Y       D  K+FDE
Sbjct: 88  HSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSXIDVQKVFDE 147

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
           M  +N +S+V  I  Y  + +  +A+ LFS +   G   N   + + L+  +   + EL 
Sbjct: 148 MLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELG 207

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDC-------------- 222
             + + V +   ++N  V TA+ + +  CG +E A+ VFDG+                  
Sbjct: 208 KQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQA 267

Query: 223 --FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
              E AL  F++M   G + + F F+ VLK C  L+   + K  H   +K   E ++ V 
Sbjct: 268 KKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVG 327

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
             L+D Y K G+I +A R F  + + + + WS +I+ ++Q+    D +++F  +R   V 
Sbjct: 328 TPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVV 387

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
            N F + SV QACA    L++G+Q H   ++ GL+S ++  +A++ +Y+KCGR++ +   
Sbjct: 388 LNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRA 447

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F    + + V W  +I GY   G   +A+  F +M    V    VT+ +VL AC+    +
Sbjct: 448 FESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLV 507

Query: 461 EPGMQVHCLTVKANYDMDVVVA--NALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMI 517
               Q +  ++  +Y +   +   + +ID Y++ G + +A  L+  M  + + +SW +++
Sbjct: 508 AEAKQ-YLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLXEALELINRMPFEPDAMSWKSLL 566

Query: 518 SGYSMH 523
            G   H
Sbjct: 567 GGCWAH 572



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 190/383 (49%), Gaps = 20/383 (5%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           NS  Y + LQSC+    L+    +H  V++     ++     + N+YV+   L  A  +F
Sbjct: 187 NSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVF 246

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D M  +N +++   + GYT + +   A+ LF+ +  EG EL+ F F+  LKV   +   +
Sbjct: 247 DGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWD 306

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--NDC---------- 222
           +   + + + KLG +S   VGT L+D +  CG +E A + F  +   ND           
Sbjct: 307 MGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFS 366

Query: 223 ----FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
                E+ +  F+ +R+ G   N+F +  V +AC     + +   AHG A+K      LY
Sbjct: 367 QSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLY 426

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
              A++ +Y+K G +  ARR FE + + D + W+ +I+ YA    + +A+  F RM+   
Sbjct: 427 GESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYG 486

Query: 339 VAPNQFTFVSVLQACATMEGL--DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
           V PN  TF++VL AC +  GL  +    + S+    G+   +   + ++D Y++ G +  
Sbjct: 487 VRPNAVTFIAVLTAC-SHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLXE 545

Query: 397 SVELFAESP-KRNHVTWNTMIVG 418
           ++EL    P + + ++W +++ G
Sbjct: 546 ALELINRMPFEPDAMSWKSLLGG 568



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/298 (23%), Positives = 134/298 (44%), Gaps = 25/298 (8%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E +   ++  L+ C   +D      IH  ++K G   ++     L++ YVK   +  A +
Sbjct: 286 ELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYR 345

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
            F  + E N +S+   I G++ S +  + + +F++L  EG  LN F +T+  +   +   
Sbjct: 346 SFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQAN 405

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------------- 218
             +         K G  S  +  +A++  +S CG +++AR+ F+ +              
Sbjct: 406 LNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISG 465

Query: 219 --FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY--- 273
             ++    EAL FF +M++ G +PN  TF  VL AC     +  AK   G ++   Y   
Sbjct: 466 YAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLG-SMSRDYGVK 524

Query: 274 -EMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPW-SFMIARYAQTDLSIDAV 328
             +D Y    ++D Y+++G +  A  +   MP + D + W S +   +A  DL +  +
Sbjct: 525 PTIDHY--DCMIDTYSRAGLLXEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKI 580


>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
 gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 215/547 (39%), Positives = 317/547 (57%), Gaps = 33/547 (6%)

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
            L+  Y ++G IS AR++F++MP+++V+ W+ MI  Y Q  L  +A  LF RM +     
Sbjct: 30  GLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWRMPER---- 85

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           N  ++  +L        +D   Q+  ++     + DV  S  ++D     GR+  + E+F
Sbjct: 86  NVVSWTVMLGGLIEDGRVDEARQLFDMMP----VKDVVASTNMIDGLCSEGRLIEAREIF 141

Query: 402 AESPKRNHVTWNTMIVG-------------YVQLGEVGKAMIMFSKMLEEQVPATEVTYS 448
            E P+RN V W +MI G             Y + G   +A+ +FS M  E V  +  +  
Sbjct: 142 DEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPSFPSVI 201

Query: 449 SVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDW 508
           SVL  C SLA+L+ G QVH   V++ +D+D+ V++ LI MY KCG +  A+ VFD  +  
Sbjct: 202 SVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSK 261

Query: 509 NEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYF 568
           + V WN++I+GY+ HG   + L+VF  M      P+ +TF+GVLSACS  G +++G   F
Sbjct: 262 DIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIF 321

Query: 569 KSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
           +SM + Y ++P  EHY  MV LLGRAG L++A  LIE +P +   ++W ALLGAC  H N
Sbjct: 322 ESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGACRTHKN 381

Query: 629 VEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIE 677
           +++  ++A+ +L  EP +   ++LLSN+Y+    W+           K   K PG SWIE
Sbjct: 382 LDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSRWKDVVELRKTMRAKNLRKSPGCSWIE 441

Query: 678 NQGMVHYFR-AGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWV 736
               VH F   G TSH +  +I   L  L    R+AGY PD S V+ DV E+EK   L  
Sbjct: 442 VDKKVHIFSGGGSTSHPEHEMILKKLGKLGALLREAGYCPDGSFVMHDVDEEEKVHSLRD 501

Query: 737 HSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQD 796
           HSEKLA+A+ L K+P   PIR++KNLR+C D H+ IK+I+++  REII+RD +RFHHF+D
Sbjct: 502 HSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDSHSTIKLIAQVTGREIILRDTNRFHHFKD 561

Query: 797 GCCSCGD 803
           G CSC D
Sbjct: 562 GLCSCSD 568



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 190/426 (44%), Gaps = 53/426 (12%)

Query: 101 YVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAF 160
           Y +  R  +A KLFD+MPE NTIS+   + GY  +    EA  +F  +     E N  ++
Sbjct: 4   YFQNKRPREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKM----PERNVVSW 59

Query: 161 TAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN 220
           TA ++  V  G  E    +F   +++  + N    T ++      G V+ AR++FD +  
Sbjct: 60  TAMIRGYVQEGLIEEAELLF---WRM-PERNVVSWTVMLGGLIEDGRVDEARQLFDMMPV 115

Query: 221 DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
                + N    +                                      C E  L  A
Sbjct: 116 KDVVASTNMIDGL--------------------------------------CSEGRLIEA 137

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
             + D   +   ++    I  E   KD   WS MI  Y +    ++A+ LF  M++  V 
Sbjct: 138 REIFDEMPQRNVVAWTSMISGE---KDDGTWSTMIKIYERKGFELEALALFSLMQREGVR 194

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           P+  + +SVL  C ++  LD G Q+HS +VR     D++VS+ L+ +Y KCG +  +  +
Sbjct: 195 PSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRV 254

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F     ++ V WN++I GY Q G   KA+ +F  M    +   E+T+  VL AC+    +
Sbjct: 255 FDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKV 314

Query: 461 EPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMI 517
           + G+++   ++K+ Y +D    +   ++D+  + G + +A  L+ +M  + + + W A++
Sbjct: 315 KEGLEIF-ESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALL 373

Query: 518 SGYSMH 523
                H
Sbjct: 374 GACRTH 379



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 170/356 (47%), Gaps = 45/356 (12%)

Query: 95  NVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHE 154
           N L++ YV+   + +A K+FD+MPERN +S+   I+GY       EA  LF  +     E
Sbjct: 29  NGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWRMP----E 84

Query: 155 LNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKV 214
            N  ++T  L  L+  G  +    +F  +       +    T +ID     G +  AR++
Sbjct: 85  RNVVSWTVMLGGLIEDGRVDEARQLFDMMPV----KDVVASTNMIDGLCSEGRLIEAREI 140

Query: 215 FD---------------GLFNDC-------------FE-EALNFFSQMRAVGFKPNNFTF 245
           FD               G  +D              FE EAL  FS M+  G +P+  + 
Sbjct: 141 FDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPSFPSV 200

Query: 246 AFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPK 305
             VL  C  L ++   +  H   +++ +++D+YV+  L+ +Y K G++  A+R+F+    
Sbjct: 201 ISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSS 260

Query: 306 KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA----TMEGLDL 361
           KD++ W+ +IA YAQ      A+E+F  M  + +AP++ TF+ VL AC+      EGL++
Sbjct: 261 KDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEI 320

Query: 362 GNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMI 416
              + S   +V   ++ +    ++D+  + G++  ++ L    P + + + W  ++
Sbjct: 321 FESMKS-KYQVDPKTEHYA--CMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALL 373



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 125/265 (47%), Gaps = 35/265 (13%)

Query: 382 NALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVP 441
           N L+  Y + G +  + ++F + P+RN V+W  MI GYVQ G + +A ++F +M E  V 
Sbjct: 29  NGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWRMPERNV- 87

Query: 442 ATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM----DVVVANALIDMYAKCGSITD 497
              V+++ +L        ++   Q+        +DM    DVV +  +ID     G + +
Sbjct: 88  ---VSWTVMLGGLIEDGRVDEARQL--------FDMMPVKDVVASTNMIDGLCSEGRLIE 136

Query: 498 ARLVFDMMNDWNEVSWNAMISG-------------YSMHGLSAEVLKVFDLMQQRGWRPN 544
           AR +FD M   N V+W +MISG             Y   G   E L +F LMQ+ G RP+
Sbjct: 137 AREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPS 196

Query: 545 NLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTS--MVSLLGRAGHLDKAAK 602
             + + VLS C +   L+ G      +V +   +  I+ Y S  ++++  + G L  A +
Sbjct: 197 FPSVISVLSVCGSLASLDHGRQVHSQLVRS---QFDIDIYVSSVLITMYIKCGDLVTAKR 253

Query: 603 LIEGIPFQPSVMIWRALLGACIIHN 627
           + +    +  VM W +++     H 
Sbjct: 254 VFDRFSSKDIVM-WNSIIAGYAQHG 277



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 77/322 (23%), Positives = 137/322 (42%), Gaps = 48/322 (14%)

Query: 49  FSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLP 108
           + + E N  S+   L   I++  +  A     Q+       D+ A+  +++      RL 
Sbjct: 80  WRMPERNVVSWTVMLGGLIEDGRVDEAR----QLFDMMPVKDVVASTNMIDGLCSEGRLI 135

Query: 109 DATKLFDEMPERNTISFVTTIQG-------------YTVSSQFVEAVGLFSTLHREGHEL 155
           +A ++FDEMP+RN +++ + I G             Y      +EA+ LFS + REG   
Sbjct: 136 EAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRP 195

Query: 156 NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF 215
           +  +  + L V  S+   +    V + + +   D + +V + LI  +  CG +  A++VF
Sbjct: 196 SFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVF 255

Query: 216 D---------------GLFNDCF-EEALNFFSQMRAVGFKPNNFTFAFVLKACL------ 253
           D               G     F E+AL  F  M +    P+  TF  VL AC       
Sbjct: 256 DRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVK 315

Query: 254 -GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPW 311
            GL+     KS +    KT +         ++DL  ++G+++ A  + E MP + D I W
Sbjct: 316 EGLEIFESMKSKYQVDPKTEH------YACMVDLLGRAGKLNEAMNLIENMPVEADAIVW 369

Query: 312 SFMIARYAQTDLSIDAVELFCR 333
             ++    +T  ++D  E+  +
Sbjct: 370 GALLG-ACRTHKNLDLAEIAAK 390



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 75/150 (50%), Gaps = 16/150 (10%)

Query: 497 DARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS 556
           +AR +FD M + N +SWN ++SGY  +G+ +E  KVFD M +R    N +++  ++    
Sbjct: 12  EARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPER----NVVSWTAMIRGYV 67

Query: 557 NGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIW 616
             GL+E+ E  F  M      E  +  +T M+  L   G +D+A +L + +P +  V   
Sbjct: 68  QEGLIEEAELLFWRMP-----ERNVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVAST 122

Query: 617 RALLGACIIHNNVEIGRL-SAQHILDFEPE 645
             + G C        GRL  A+ I D  P+
Sbjct: 123 NMIDGLC------SEGRLIEAREIFDEMPQ 146


>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 803

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 233/736 (31%), Positives = 381/736 (51%), Gaps = 45/736 (6%)

Query: 107 LPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV 166
           + DA +LFDEM + +T  +   I+G+T    + EA+ L+  +   G + + F +   +K 
Sbjct: 76  MEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKADSFTYPFVIKS 135

Query: 167 LVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------- 218
           +  +   E    + A V KL   S+ +V  +LI  +   GC   A KVF+ +        
Sbjct: 136 VTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPERDIVSW 195

Query: 219 ---------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCAL 269
                      D F  +L  F +M   GFKP+ F+    L AC  + +  + K  H  A+
Sbjct: 196 NSMISGYLALEDGFR-SLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKELHCHAV 254

Query: 270 KTCYEM-DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAV 328
           ++  E  D+ V  ++LD+Y+K GE+S A RIF+ + +++++ W+ +I  YA+     DA 
Sbjct: 255 RSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSRVTDAF 314

Query: 329 ELFCRM-RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDV 387
             F +M  Q  + P+  T +++L ACA +EG      IH   +R G L  + +  AL+D+
Sbjct: 315 LCFQKMSEQNGLQPDVITLINLLPACAILEG----RTIHGYAMRRGFLPHIVLDTALIDM 370

Query: 388 YAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTY 447
           Y + G+++++  +F    ++N ++WN++I  YVQ G+   A+ +F K+ +  +     T 
Sbjct: 371 YGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLPDSTTI 430

Query: 448 SSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND 507
           +S+L A A   +L  G Q+H   VK+ Y  + ++ N+L+ MYA CG + DAR  F+ +  
Sbjct: 431 ASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLL 490

Query: 508 WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAY 567
            + VSWN++I  Y++HG     + +F  M      PN  TF  +L+ACS  G++++G  Y
Sbjct: 491 KDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSISGMVDEGWEY 550

Query: 568 FKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
           F+SM   YGI+P IEHY  M+ L+GR G+   A + I  +PF P+  IW +LL A   HN
Sbjct: 551 FESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMPFLPTARIWGSLLNASRNHN 610

Query: 628 NVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWI 676
           ++ +   +A+ I   E ++   +VLL N+YA AR WE           K  S+    S +
Sbjct: 611 DITVAEFAAEQIFKMEHDNTGCYVLLLNMYAEARRWEDVNRIKLLMESKGISRTSSRSTV 670

Query: 677 ENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAG-------YIPDLSAVLRDVREDE 729
           E +   H    GD SH + N I    E L++ SR  G       Y+  +S + R+     
Sbjct: 671 EAKSKTHVLTNGDRSHVETNKI---YEVLDIVSRMIGEEEEEDSYVHYVSKLRRETLAKS 727

Query: 730 KERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVH 789
           +      HS +LA  F L        + +  N RIC  CH  ++  SK+ +REI++ D  
Sbjct: 728 RSNSPRRHSVRLATCFGLISTETGRTVTVRNNTRICRKCHEFLEKASKMTRREIVVGDSK 787

Query: 790 RFHHFQDGCCSCGDFW 805
            FHHF +G CSCG++W
Sbjct: 788 IFHHFSNGRCSCGNYW 803



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 122/477 (25%), Positives = 241/477 (50%), Gaps = 33/477 (6%)

Query: 47  ITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNR 106
           + FS  + +S +Y   ++S      L+    IH  V+K     D++  N L+++Y+KL  
Sbjct: 117 MVFSGVKADSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGC 176

Query: 107 LPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKV 166
             DA K+F+EMPER+ +S+ + I GY        ++ LF  + + G + + F+  + L  
Sbjct: 177 SWDAEKVFEEMPERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGA 236

Query: 167 LV-----SMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF-- 219
                  +MG    C  V + +       +  V T+++D +S  G V +A ++F  +   
Sbjct: 237 CSHVYSPNMGKELHCHAVRSRI----ETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQR 292

Query: 220 --------------NDCFEEALNFFSQM-RAVGFKPNNFTFAFVLKACLGLDTIRVAKSA 264
                         N    +A   F +M    G +P+  T   +L AC  L+     ++ 
Sbjct: 293 NIVAWNVLIGCYARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPACAILE----GRTI 348

Query: 265 HGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLS 324
           HG A++  +   + +  AL+D+Y + G++ +A  IF+ + +K++I W+ +IA Y Q   +
Sbjct: 349 HGYAMRRGFLPHIVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKN 408

Query: 325 IDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNAL 384
             A+ELF ++  + + P+  T  S+L A A    L  G QIH+ +V+    S+  + N+L
Sbjct: 409 YSALELFQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSL 468

Query: 385 MDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATE 444
           + +YA CG +E++ + F     ++ V+WN++I+ Y   G    ++ +FS+M+  +V   +
Sbjct: 469 VHMYAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNK 528

Query: 445 VTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDAR 499
            T++S+L AC+    ++ G + +  ++K  Y +D  + +   ++D+  + G+ + A+
Sbjct: 529 STFASLLAACSISGMVDEGWE-YFESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAK 584



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 192/340 (56%), Gaps = 8/340 (2%)

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
           +  SG + +A ++F+EM K D   W+ MI  +    L  +A++L+CRM  + V  + FT+
Sbjct: 70  FADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKADSFTY 129

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
             V+++   +  L+ G +IH++V+++  +SDV+V N+L+ +Y K G   ++ ++F E P+
Sbjct: 130 PFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPE 189

Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
           R+ V+WN+MI GY+ L +  +++++F +ML+        +  S L AC+ + +   G ++
Sbjct: 190 RDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKEL 249

Query: 467 HCLTVKANYDM-DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGL 525
           HC  V++  +  DV+V  +++DMY+K G ++ A  +F  +   N V+WN +I  Y+ +  
Sbjct: 250 HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSR 309

Query: 526 SAEVLKVFDLM-QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY 584
             +    F  M +Q G +P+ +T + +L AC+   +LE    +  +M    G  P I   
Sbjct: 310 VTDAFLCFQKMSEQNGLQPDVITLINLLPACA---ILEGRTIHGYAM--RRGFLPHIVLD 364

Query: 585 TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACI 624
           T+++ + G  G L  A  + + I  + +++ W +++ A +
Sbjct: 365 TALIDMYGEWGQLKSAEVIFDRIA-EKNLISWNSIIAAYV 403


>gi|20197649|gb|AAM15176.1| putative selenium-binding protein [Arabidopsis thaliana]
          Length = 472

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 200/476 (42%), Positives = 291/476 (61%), Gaps = 17/476 (3%)

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           +FT+  +L A   +      +++H+ VV+        V  AL+D Y K G++E + ++F+
Sbjct: 1   EFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFS 56

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL-AALE 461
               ++ V W+ M+ GY Q GE   A+ MF ++ +  +   E T+SS+L  CA+  A++ 
Sbjct: 57  GIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMG 116

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
            G Q H   +K+  D  + V++AL+ MYAK G+I  A  VF    + + VSWN+MISGY+
Sbjct: 117 QGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYA 176

Query: 522 MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
            HG + + L VF  M++R  + + +TF+GV +AC++ GL+E+GE YF  MV +  I P  
Sbjct: 177 QHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTK 236

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
           EH + MV L  RAG L+KA K+IE +P      IWR +L AC +H   E+GRL+A+ I+ 
Sbjct: 237 EHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIA 296

Query: 642 FEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDT 690
            +PED A +VLLSN+YA +  W++ A            KEPG SWIE +   + F AGD 
Sbjct: 297 MKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDR 356

Query: 691 SHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKM 750
           SH   + I   LE L+ + +  GY PD S VL+D+ ++ KE  L  HSE+LA+AF L   
Sbjct: 357 SHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIAT 416

Query: 751 PPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHF-QDGCCSCGDFW 805
           P  SP+ IIKNLR+C DCH  IK+I+KI +REI++RD +RFHHF  DG CSCGDFW
Sbjct: 417 PKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 472



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 153/285 (53%), Gaps = 7/285 (2%)

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
            FT++ +L A   +    V    H   +KT YE    V  ALLD Y K G++  A ++F 
Sbjct: 1   EFTYSVILTALPVISPSEV----HAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFS 56

Query: 302 EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC-ATMEGLD 360
            +  KD++ WS M+A YAQT  +  A+++F  + +  + PN+FTF S+L  C AT   + 
Sbjct: 57  GIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMG 116

Query: 361 LGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYV 420
            G Q H   ++  L S + VS+AL+ +YAK G +E++ E+F    +++ V+WN+MI GY 
Sbjct: 117 QGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYA 176

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV 480
           Q G+  KA+ +F +M + +V    VT+  V  AC     +E G +   + V+        
Sbjct: 177 QHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTK 236

Query: 481 VANA-LIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
             N+ ++D+Y++ G +  A +++ +M N      W  +++   +H
Sbjct: 237 EHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVH 281



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 114/252 (45%), Gaps = 32/252 (12%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           +H QV+K            LL+ YVKL ++ +A K+F  + +++ +++   + GY  + +
Sbjct: 19  VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGE 78

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVL----VSMGWAELCPCVFACVYKLGHDSNAF 193
              A+ +F  L + G + N F F++ L V      SMG  +     FA   +L  DS+  
Sbjct: 79  TEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHG-FAIKSRL--DSSLC 135

Query: 194 VGTALIDAFSVCGCVEFARKVF-----------DGLFNDCFE-----EALNFFSQMRAVG 237
           V +AL+  ++  G +E A +VF           + + +   +     +AL+ F +M+   
Sbjct: 136 VSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRK 195

Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKS-----AHGCALKTCYEMDLYVAVALLDLYTKSGE 292
            K +  TF  V  AC     +   +         C +    E +      ++DLY+++G+
Sbjct: 196 VKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHN----SCMVDLYSRAGQ 251

Query: 293 ISNARRIFEEMP 304
           +  A ++ E MP
Sbjct: 252 LEKAMKVIENMP 263


>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Brachypodium distachyon]
          Length = 868

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 244/735 (33%), Positives = 374/735 (50%), Gaps = 29/735 (3%)

Query: 95  NVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHE 154
           N +L++ V+      A K+F +MPER+  S+   + GY  +    EA+ L+  +   G  
Sbjct: 133 NAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGAR 192

Query: 155 LNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKV 214
            + + F   L+    +    +   V A V + G      V  AL+  ++ CG VE ARKV
Sbjct: 193 PDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKV 252

Query: 215 FDGL-FNDCF---------------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTI 258
           FDG+   DC                E  L  F  M     +PN  T   V  A   L  +
Sbjct: 253 FDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDL 312

Query: 259 RVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARY 318
             AK  H  A+K  +  D+    +L+ +Y+  G +  A  +F  M  +D + W+ MI+ Y
Sbjct: 313 DFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGY 372

Query: 319 AQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDV 378
            +      A+E++  M    V+P+  T  S L ACA++  LD+G ++H L    G +  +
Sbjct: 373 EKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYI 432

Query: 379 FVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE 438
            V+NAL+++YAK   +E ++E+F   P ++ ++W++MI G+    +  +A+  F  ML +
Sbjct: 433 VVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHMLAD 492

Query: 439 QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDA 498
             P + VT+ + L ACA+  +L  G ++H   ++     +  V NAL+D+Y KCG    A
Sbjct: 493 VKPNS-VTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYA 551

Query: 499 RLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNG 558
              F      + VSWN M++G+  HG     L  F+ M + G  P+ +TFV +L  CS  
Sbjct: 552 WAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSRA 611

Query: 559 GLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRA 618
           G++ QG   F SM   Y I P ++HY  MV LL R G L +    I  +P  P   +W A
Sbjct: 612 GMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWGA 671

Query: 619 LLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAA 667
           LL  C IH N+E+G L+A+ +L+ EP D   HVLLS++YA A  W            K  
Sbjct: 672 LLNGCRIHRNIELGELAAKIVLELEPNDAGYHVLLSDLYADAGMWAEVSKVRKTMRVKGL 731

Query: 668 SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVRE 727
             + G SW+E +G +H F   D SH  +  I  +L+ +  + + +G+ P  S  L D +E
Sbjct: 732 EHDYGCSWVEVKGAIHAFLTDDESHPQIKEINDVLDGIYERMKASGFAPVESYSLED-KE 790

Query: 728 DEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRD 787
             K+  L  HSE+LA+AF L    P + I + KN   C  CH  +++ISKIV+REI +RD
Sbjct: 791 VSKDDVLCGHSERLAVAFGLINTTPGTSICVTKNQYTCESCHGILRMISKIVRREITVRD 850

Query: 788 VHRFHHFQDGCCSCG 802
              FHHF+DG CSCG
Sbjct: 851 TKEFHHFRDGSCSCG 865



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/392 (30%), Positives = 207/392 (52%), Gaps = 10/392 (2%)

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSF 313
           GL     A +AHG          L +  A+L +  + GE  +A ++F +MP++DV  W+ 
Sbjct: 113 GLRACGHADAAHGT-------FGLRLGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNV 165

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
           M+  Y +     +A++L+ RM  A   P+ +TF  VL++C  +  L +G ++H+ V+R G
Sbjct: 166 MVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFG 225

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
           L  +V V NAL+ +YAKCG +E + ++F      + ++WN MI G+ +  E    + +F 
Sbjct: 226 LGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFL 285

Query: 434 KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCG 493
            MLE++V    +T +SV  A   L+ L+   ++H L VK  +  DV   N+LI MY+  G
Sbjct: 286 HMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLG 345

Query: 494 SITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLS 553
            + +A  VF  M   + +SW AMISGY  +G   + L+V+ LM+     P+++T    L+
Sbjct: 346 RMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALA 405

Query: 554 ACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSV 613
           AC++ G L+ G      +  + G    I    ++V +  ++  ++KA ++ + +P    V
Sbjct: 406 ACASLGRLDVG-IKLHELATSKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMP-DKDV 463

Query: 614 MIWRALL-GACIIHNNVEIGRLSAQHILDFEP 644
           + W +++ G C  H N E        + D +P
Sbjct: 464 ISWSSMIAGFCFNHKNFEALYYFRHMLADVKP 495



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 138/488 (28%), Positives = 231/488 (47%), Gaps = 25/488 (5%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
           +++   L+SC    DL     +H  VL+ G  +++   N L+ +Y K   +  A K+FD 
Sbjct: 196 YTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDG 255

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW---A 173
           M   + IS+   I G+  + +    + LF  LH    E+ P   T    V V+ G     
Sbjct: 256 MSLTDCISWNAMIAGHFENHECEAGLELF--LHMLEDEVEPNLMT-ITSVTVASGLLSDL 312

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCG-----CVEFAR----------KVFDGL 218
           +    + A   K G  ++     +LI  +S  G     C  F+R           +  G 
Sbjct: 313 DFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGY 372

Query: 219 FNDCF-EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
             + F ++AL  ++ M      P++ T A  L AC  L  + V    H  A    +   +
Sbjct: 373 EKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYI 432

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
            VA AL+++Y KS  I  A  +F+ MP KDVI WS MIA +     + +A+  F R   A
Sbjct: 433 VVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYF-RHMLA 491

Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
            V PN  TF++ L ACA    L  G +IH+ V+R G+ S+ +V NAL+D+Y KCG+   +
Sbjct: 492 DVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYA 551

Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
              F     ++ V+WN M+ G+V  G    A+  F++MLE      EVT+ ++L  C+  
Sbjct: 552 WAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSRA 611

Query: 458 AALEPGMQV-HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS-WNA 515
             +  G ++ H +T K +   ++     ++D+ ++ G +T+     + M    + + W A
Sbjct: 612 GMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWGA 671

Query: 516 MISGYSMH 523
           +++G  +H
Sbjct: 672 LLNGCRIH 679



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 92/384 (23%), Positives = 166/384 (43%), Gaps = 24/384 (6%)

Query: 71  DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQ 130
           DL  A  IH   +K+G   D+   N L+ +Y  L R+ +A  +F  M  R+ +S+   I 
Sbjct: 311 DLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMIS 370

Query: 131 GYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDS 190
           GY  +    +A+ +++ +       +     + L    S+G  ++   +       G   
Sbjct: 371 GYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIR 430

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFDGLFND------------CFE----EALNFFSQMR 234
              V  AL++ ++    +E A +VF  + +             CF     EAL +F  M 
Sbjct: 431 YIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHML 490

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
           A   KPN+ TF   L AC    ++R  K  H   L+     + YV  ALLDLY K G+  
Sbjct: 491 A-DVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTG 549

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
            A   F     KDV+ W+ M+A +        A+  F  M +    P++ TFV++L  C+
Sbjct: 550 YAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCS 609

Query: 355 TMEGLDLGNQI-HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTW 412
               +  G ++ HS+  +  ++ ++     ++D+ ++ GR+          P   +   W
Sbjct: 610 RAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVW 669

Query: 413 NTMIVG-----YVQLGEVGKAMIM 431
             ++ G      ++LGE+   +++
Sbjct: 670 GALLNGCRIHRNIELGELAAKIVL 693



 Score = 41.2 bits (95), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 5/123 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           NS ++  +L +C     L+    IH  VL++G   + +  N LL++YVK  +   A   F
Sbjct: 496 NSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYAWAQF 555

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFL-----KVLVS 169
                ++ +S+   + G+        A+  F+ +   G   +   F A L       +VS
Sbjct: 556 GAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSRAGMVS 615

Query: 170 MGW 172
            GW
Sbjct: 616 QGW 618


>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
 gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 905

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 232/698 (33%), Positives = 370/698 (53%), Gaps = 28/698 (4%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           ++A  L+SC   ++L   + +H   +K G  +D+   + L+++Y K   L DA   F  M
Sbjct: 193 TFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGM 252

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
           PERN +S+   I G   + Q+V  + LF  + R G  ++  ++ +  +   +M       
Sbjct: 253 PERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGR 312

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFE------------- 224
            + A   K    S+  VGTA++D ++    +  AR+ F GL N   E             
Sbjct: 313 QLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAG 372

Query: 225 ---EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
              EA+  F  M     + +  + + V  AC         +  H  A+K+ +++D+ V  
Sbjct: 373 LGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNN 432

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           A+LDLY K   +  A  IF+ M +KD + W+ +IA   Q     D +  F  M +  + P
Sbjct: 433 AVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKP 492

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           + FT+ SVL+ACA +  L+ G  +H  V++ GL SD FV++ ++D+Y KCG ++ + +L 
Sbjct: 493 DDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLH 552

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
                +  V+WN ++ G+    E  +A   FS+ML+  +     T+++VL  CA+LA +E
Sbjct: 553 DRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIE 612

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
            G Q+H   +K     D  +++ L+DMYAKCG + D+ LVF+ +   + VSWNAMI GY+
Sbjct: 613 LGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYA 672

Query: 522 MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
           +HGL  E L++F+ MQ+    PN+ TFV VL ACS+ GL + G  YF  M  +Y +EP +
Sbjct: 673 LHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQL 732

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
           EH+  MV +LGR+    +A K I  +PFQ   +IW+ LL  C I  +VEI  L+A ++L 
Sbjct: 733 EHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLL 792

Query: 642 FEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDT 690
            +P+D + ++LLSN+YA +  W   +            KEPG SWIE Q  +H F  GD 
Sbjct: 793 LDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDK 852

Query: 691 SHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVRED 728
           +H     +  ML  L  + + +GY PD SA   +V E+
Sbjct: 853 AHPRSGELYEMLNDLIGEMKLSGYEPD-SASFVEVDEE 889



 Score =  248 bits (633), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 154/564 (27%), Positives = 273/564 (48%), Gaps = 23/564 (4%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D  + N +L  Y     +  A  LFD MP+ + +S+   + GY     F E+V LF  + 
Sbjct: 124 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 183

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
           R G   +   F   LK   ++    L   V A   K G + +   G+AL+D +  C  ++
Sbjct: 184 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 243

Query: 210 FARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL 253
            A   F G+                 N+ +   L  F +M+ +G   +  ++A   ++C 
Sbjct: 244 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 303

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSF 313
            +  +   +  H  A+K  +  D  V  A++D+Y K+  +++ARR F  +P   V   + 
Sbjct: 304 AMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNA 363

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
           M+    +  L I+A+ LF  M ++ +  +  +   V  ACA  +G   G Q+H L ++ G
Sbjct: 364 MMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSG 423

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
              D+ V+NA++D+Y KC  +  +  +F    +++ V+WN +I    Q G     ++ F+
Sbjct: 424 FDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFN 483

Query: 434 KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCG 493
           +ML   +   + TY SVL+ACA+L +LE G+ VH   +K+    D  VA+ ++DMY KCG
Sbjct: 484 EMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCG 543

Query: 494 SITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLS 553
            I +A+ + D +     VSWNA++SG+S++  S E  K F  M   G +P++ TF  VL 
Sbjct: 544 IIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLD 603

Query: 554 ACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTS--MVSLLGRAGHLDKAAKLIEGIPFQP 611
            C+N   +E G+     ++    ++   + Y S  +V +  + G +  +  + E +  + 
Sbjct: 604 TCANLATIELGKQIHGQIIKQEMLD---DEYISSTLVDMYAKCGDMPDSLLVFEKVE-KR 659

Query: 612 SVMIWRALLGACIIHN-NVEIGRL 634
             + W A++    +H   VE  R+
Sbjct: 660 DFVSWNAMICGYALHGLGVEALRM 683



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 136/461 (29%), Positives = 237/461 (51%), Gaps = 20/461 (4%)

Query: 198 LIDAFSVCGCVEFARKVFDGLFN----------------DCFEEALNFFSQMRAVGFKPN 241
           ++ A+S  G +  A  +FDG+ +                  F+E+++ F +M   G  P+
Sbjct: 131 MLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPD 190

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
             TFA +LK+C  L+ + +    H  A+KT  E+D+    AL+D+Y K   + +A   F 
Sbjct: 191 RTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFY 250

Query: 302 EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL 361
            MP+++ + W   IA   Q +  +  +ELF  M++  +  +Q ++ S  ++CA M  L+ 
Sbjct: 251 GMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNT 310

Query: 362 GNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQ 421
           G Q+H+  ++    SD  V  A++DVYAK   + ++   F   P     T N M+VG V+
Sbjct: 311 GRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVR 370

Query: 422 LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVV 481
            G   +AM +F  M+   +    V+ S V  ACA       G QVHCL +K+ +D+D+ V
Sbjct: 371 AGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICV 430

Query: 482 ANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW 541
            NA++D+Y KC ++ +A L+F  M   + VSWNA+I+    +G   + +  F+ M + G 
Sbjct: 431 NNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGM 490

Query: 542 RPNNLTFVGVLSACSNGGLLEQG-EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKA 600
           +P++ T+  VL AC+    LE G   + K + +  G +  +   +++V +  + G +D+A
Sbjct: 491 KPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVA--STVVDMYCKCGIIDEA 548

Query: 601 AKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
            KL + I  Q  V+ W A+L    ++   E  +     +LD
Sbjct: 549 QKLHDRIGGQ-QVVSWNAILSGFSLNKESEEAQKFFSEMLD 588



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 229/443 (51%), Gaps = 39/443 (8%)

Query: 240 PNNFTFAFVLKACL--GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR 297
           P   TF+ V ++C   G + +   ++AH   + + +    +V+  LL +Y +    + AR
Sbjct: 55  PARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAACAR 114

Query: 298 RIFEEMPKKDVIPWSFMIARYAQT-DLSI------------------------------D 326
           R+F+ MP++D + W+ M+  Y+   D+S                               +
Sbjct: 115 RVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQE 174

Query: 327 AVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMD 386
           +V+LF  M +  V+P++ TF  +L++C+ +E L LG Q+H+L V+ GL  DV   +AL+D
Sbjct: 175 SVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVD 234

Query: 387 VYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVT 446
           +Y KC  +++++  F   P+RN V+W   I G VQ  +  + + +F +M    +  ++ +
Sbjct: 235 MYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPS 294

Query: 447 YSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN 506
           Y+S  R+CA+++ L  G Q+H   +K  +  D VV  A++D+YAK  S+TDAR  F  + 
Sbjct: 295 YASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLP 354

Query: 507 DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS-NGGLLEQGE 565
           +    + NAM+ G    GL  E + +F  M +   R + ++  GV SAC+   G  +  +
Sbjct: 355 NHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQ 414

Query: 566 AYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACII 625
            +  ++ + + ++ C+ +  +++ L G+   L +A  + +G+  + SV  W A++ A   
Sbjct: 415 VHCLAIKSGFDVDICVNN--AVLDLYGKCKALMEAYLIFQGMKQKDSVS-WNAIIAALEQ 471

Query: 626 HNNVEIGRLSAQHILDF--EPED 646
           + + +   L    +L F  +P+D
Sbjct: 472 NGHYDDTILHFNEMLRFGMKPDD 494



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 189/381 (49%), Gaps = 18/381 (4%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
           F+  S +    +C +         +HC  +K G  +D+   N +L++Y K   L +A  +
Sbjct: 391 FDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLI 450

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           F  M +++++S+   I     +  + + +  F+ + R G + + F + + LK   ++   
Sbjct: 451 FQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSL 510

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL--------------- 218
           E    V   V K G  S+AFV + ++D +  CG ++ A+K+ D +               
Sbjct: 511 EYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGF 570

Query: 219 -FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
             N   EEA  FFS+M  +G KP++FTFA VL  C  L TI + K  HG  +K     D 
Sbjct: 571 SLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDE 630

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
           Y++  L+D+Y K G++ ++  +FE++ K+D + W+ MI  YA   L ++A+ +F RM++ 
Sbjct: 631 YISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKE 690

Query: 338 FVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
            V PN  TFV+VL+AC+ +   D G    H +     L   +     ++D+  +    + 
Sbjct: 691 NVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQE 750

Query: 397 SVELFAESP-KRNHVTWNTMI 416
           +V+     P + + V W T++
Sbjct: 751 AVKFINSMPFQADAVIWKTLL 771



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 139/304 (45%), Gaps = 36/304 (11%)

Query: 339 VAPNQFTFVSVLQACATM--EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
           VAP + TF  V Q+CA    E L  G   H+ +V  G +   FVSN L+ +YA+C     
Sbjct: 53  VAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAAC 112

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS----------------------- 433
           +  +F   P+R+ V+WNTM+  Y   G++  A+ +F                        
Sbjct: 113 ARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMF 172

Query: 434 --------KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANAL 485
                   +M    V     T++ +L++C++L  L  G+QVH L VK   ++DV   +AL
Sbjct: 173 QESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSAL 232

Query: 486 IDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNN 545
           +DMY KC S+ DA   F  M + N VSW A I+G   +      L++F  MQ+ G   + 
Sbjct: 233 VDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQ 292

Query: 546 LTFVGVLSACSNGGLLEQGEAYFKSMVAN-YGIEPCIEHYTSMVSLLGRAGHLDKAAKLI 604
            ++     +C+    L  G       + N +  +  +   T++V +  +A  L  A +  
Sbjct: 293 PSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVG--TAIVDVYAKANSLTDARRAF 350

Query: 605 EGIP 608
            G+P
Sbjct: 351 FGLP 354



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 99/236 (41%), Gaps = 40/236 (16%)

Query: 427 KAMIMFSKMLEEQ-----VPATEVTYSSVLRACASLA--ALEPGMQVHCLTVKANYDMDV 479
           +A+   ++M  EQ     V    VT+S V ++CA     AL  G   H   V + +    
Sbjct: 35  RALAEHARMPAEQQQPPPVAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTA 94

Query: 480 VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM----------------------- 516
            V+N L+ MYA+C     AR VFD M   + VSWN M                       
Sbjct: 95  FVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDP 154

Query: 517 --------ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYF 568
                   +SGY   G+  E + +F  M +RG  P+  TF  +L +CS    L  G    
Sbjct: 155 DVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLG-VQV 213

Query: 569 KSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACI 624
            ++    G+E  +   +++V + G+   LD A     G+P + + + W A +  C+
Sbjct: 214 HALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMP-ERNWVSWGAAIAGCV 268


>gi|242077758|ref|XP_002448815.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
 gi|241939998|gb|EES13143.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
          Length = 913

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 224/669 (33%), Positives = 354/669 (52%), Gaps = 48/669 (7%)

Query: 185 KLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF----------------EEALN 228
           KLG  S+  +G  LID ++ CG ++ A +VF G+ +                      L 
Sbjct: 245 KLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMRDRNVVSWTALMVGFLQHGDATGCLR 304

Query: 229 FFSQMRAVG-FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLY 287
              +MRA     PN +T +  LKAC   + +      HG  ++T YE    VA +L+ LY
Sbjct: 305 LLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGVGIHGLCVRTGYEEHYVVASSLVLLY 364

Query: 288 TKSGEISNARRIFE-EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA------ 340
           +K G I +ARR+F+     + +  W+ MI+ YA      DA+ +F  MR+          
Sbjct: 365 SKGGRIGDARRVFDCAGLGRGLATWNAMISGYAHAGHGRDALLVFREMRRRRRRHEDQHQ 424

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL--LSDVFVSNALMDVYAKCGRMENSV 398
           P++FTF S+L+AC  +     G Q+H+ +   G    S+  ++ AL+D+Y KCGR+  ++
Sbjct: 425 PDEFTFASLLKACGGLGAPREGAQVHAAMAASGFSTASNAILAGALVDMYVKCGRLPVAM 484

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
           ++F    ++N + W T++VG+ Q G+V +A+ +F +       A     SS++   A  A
Sbjct: 485 QVFERLERKNAIQWTTVVVGHAQEGQVMEALELFRRFWRSGARADAHVLSSIVGVLADFA 544

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
            +E G QVHC  VK+    DV   N+++DMY KCG   +A  +F  +   N VSW  MI+
Sbjct: 545 LVEQGRQVHCYGVKSPAGTDVSAGNSIVDMYLKCGLPDEAERMFREIPARNVVSWTTMIN 604

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
           G   HGL  E + +F+ M+  G  P+ +T++ +LSACS+ GL+++   YF  +  +  + 
Sbjct: 605 GLGKHGLGREAVAMFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVR 664

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P  EHY  MV LLGRAG L +A  LI  +P +P+V +W+ LL AC +H +V +GR +   
Sbjct: 665 PKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDV 724

Query: 639 ILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRA 687
           +L  + ++   +V LSN++A A +W            +   K+ G SW+E    VH+F  
Sbjct: 725 LLAIDGDNPVNYVTLSNVFAEAGAWRECHKVRDAMRRRGLKKQGGCSWVEIGKEVHFFYG 784

Query: 688 G--DTSHADMNIIRGMLEWLNMKSRKA-GYIP-DLSAVLRDVREDEKERYLWVHSEKLAL 743
           G  + +H     IR +L  +  + R+  GY   D+   L DV E+ +   L  HSE+LA+
Sbjct: 785 GGDEEAHPQAGDIRRVLRDVETRVREQLGYCADDVQFALHDVDEESRAESLRAHSERLAV 844

Query: 744 AFALFK-------MPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQD 796
              L +            PIR+ KNLR+C DCH   K +S +V+R +++RD +RFH F+ 
Sbjct: 845 GLWLLRNGVDGGGGGHRQPIRVYKNLRVCGDCHEFFKGLSAVVRRALVVRDANRFHRFEH 904

Query: 797 GCCSCGDFW 805
           G CSC D+W
Sbjct: 905 GTCSCKDYW 913



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 191/397 (48%), Gaps = 20/397 (5%)

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
            A +L+A     ++R     HG   K  +  D  +   L+D+Y K GE+  A  +F  M 
Sbjct: 220 IADLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMR 279

Query: 305 KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF-VAPNQFTFVSVLQACATMEGLDLGN 363
            ++V+ W+ ++  + Q   +   + L   MR A   APN++T  + L+AC   E +  G 
Sbjct: 280 DRNVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGV 339

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF-AESPKRNHVTWNTMIVGYVQL 422
            IH L VR G      V+++L+ +Y+K GR+ ++  +F      R   TWN MI GY   
Sbjct: 340 GIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAHA 399

Query: 423 GEVGKAMIMFSKML------EEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD 476
           G    A+++F +M       E+Q    E T++S+L+AC  L A   G QVH     + + 
Sbjct: 400 GHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFS 459

Query: 477 M--DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
              + ++A AL+DMY KCG +  A  VF+ +   N + W  ++ G++  G   E L++F 
Sbjct: 460 TASNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALELFR 519

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE-PC---IEHYTSMVSL 590
              + G R +      ++   ++  L+EQG       V  YG++ P    +    S+V +
Sbjct: 520 RFWRSGARADAHVLSSIVGVLADFALVEQGR-----QVHCYGVKSPAGTDVSAGNSIVDM 574

Query: 591 LGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
             + G  D+A ++   IP + +V+ W  ++     H 
Sbjct: 575 YLKCGLPDEAERMFREIPAR-NVVSWTTMINGLGKHG 610



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 134/519 (25%), Positives = 231/519 (44%), Gaps = 41/519 (7%)

Query: 39  CSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLL 98
           C+N    P   +  E      A  L++  +   L+  + +H  + K G   D    N L+
Sbjct: 201 CTNPVAFPFPTNPME-RRKMIADLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLI 259

Query: 99  NVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH--REGHELN 156
           ++Y K   L  A ++F  M +RN +S+   + G+    Q  +A G    L   R   E  
Sbjct: 260 DMYAKCGELDMAGEVFGGMRDRNVVSWTALMVGFL---QHGDATGCLRLLGEMRAASEAA 316

Query: 157 P--FAFTAFLK---VLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFA 211
           P  +  +A LK   V   MG       +     + G++ +  V ++L+  +S  G +  A
Sbjct: 317 PNEYTLSASLKACCVTEDMGAG---VGIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDA 373

Query: 212 RKVFD--GLFNDCF---------------EEALNFFSQMRAVG------FKPNNFTFAFV 248
           R+VFD  GL                     +AL  F +MR          +P+ FTFA +
Sbjct: 374 RRVFDCAGLGRGLATWNAMISGYAHAGHGRDALLVFREMRRRRRRHEDQHQPDEFTFASL 433

Query: 249 LKACLGLDTIRVAKSAHGCALKTCYEM--DLYVAVALLDLYTKSGEISNARRIFEEMPKK 306
           LKAC GL   R     H     + +    +  +A AL+D+Y K G +  A ++FE + +K
Sbjct: 434 LKACGGLGAPREGAQVHAAMAASGFSTASNAILAGALVDMYVKCGRLPVAMQVFERLERK 493

Query: 307 DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIH 366
           + I W+ ++  +AQ    ++A+ELF R  ++    +     S++   A    ++ G Q+H
Sbjct: 494 NAIQWTTVVVGHAQEGQVMEALELFRRFWRSGARADAHVLSSIVGVLADFALVEQGRQVH 553

Query: 367 SLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVG 426
              V+    +DV   N+++D+Y KCG  + +  +F E P RN V+W TMI G  + G   
Sbjct: 554 CYGVKSPAGTDVSAGNSIVDMYLKCGLPDEAERMFREIPARNVVSWTTMINGLGKHGLGR 613

Query: 427 KAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ-VHCLTVKANYDMDVVVANAL 485
           +A+ MF +M    V   EVTY ++L AC+    ++   +   C+               +
Sbjct: 614 EAVAMFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACM 673

Query: 486 IDMYAKCGSITDAR-LVFDMMNDWNEVSWNAMISGYSMH 523
           +D+  + G + +AR L+  M  +     W  ++S   +H
Sbjct: 674 VDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVH 712



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 88/280 (31%), Positives = 136/280 (48%), Gaps = 15/280 (5%)

Query: 309 IPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN-----QFTFVSVLQACATMEGLDLGN 363
           +P+S  +A     D       L C    AF  P      +     +L+A A    L  G 
Sbjct: 178 LPFSEPLASTLHPDCVDICTRLLCTNPVAFPFPTNPMERRKMIADLLRASAKGSSLRGGV 237

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
           Q+H  + ++G  SD  + N L+D+YAKCG ++ + E+F     RN V+W  ++VG++Q G
Sbjct: 238 QLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMRDRNVVSWTALMVGFLQHG 297

Query: 424 EVGKAMIMFSKM--LEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVV 481
           +    + +  +M    E  P  E T S+ L+AC     +  G+ +H L V+  Y+   VV
Sbjct: 298 DATGCLRLLGEMRAASEAAP-NEYTLSASLKACCVTEDMGAGVGIHGLCVRTGYEEHYVV 356

Query: 482 ANALIDMYAKCGSITDARLVFDMMN-DWNEVSWNAMISGYSMHGLSAEVLKVFDLM---- 536
           A++L+ +Y+K G I DAR VFD         +WNAMISGY+  G   + L VF  M    
Sbjct: 357 ASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAHAGHGRDALLVFREMRRRR 416

Query: 537 --QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
              +   +P+  TF  +L AC   G   +G     +M A+
Sbjct: 417 RRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAAS 456


>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
          Length = 863

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 232/698 (33%), Positives = 370/698 (53%), Gaps = 28/698 (4%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           ++A  L+SC   ++L   + +H   +K G  +D+   + L+++Y K   L DA   F  M
Sbjct: 151 TFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGM 210

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
           PERN +S+   I G   + Q+V  + LF  + R G  ++  ++ +  +   +M       
Sbjct: 211 PERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGR 270

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFE------------- 224
            + A   K    S+  VGTA++D ++    +  AR+ F GL N   E             
Sbjct: 271 QLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAG 330

Query: 225 ---EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
              EA+  F  M     + +  + + V  AC         +  H  A+K+ +++D+ V  
Sbjct: 331 LGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNN 390

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           A+LDLY K   +  A  IF+ M +KD + W+ +IA   Q     D +  F  M +  + P
Sbjct: 391 AVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKP 450

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           + FT+ SVL+ACA +  L+ G  +H  V++ GL SD FV++ ++D+Y KCG ++ + +L 
Sbjct: 451 DDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLH 510

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
                +  V+WN ++ G+    E  +A   FS+ML+  +     T+++VL  CA+LA +E
Sbjct: 511 DRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIE 570

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
            G Q+H   +K     D  +++ L+DMYAKCG + D+ LVF+ +   + VSWNAMI GY+
Sbjct: 571 LGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYA 630

Query: 522 MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
           +HGL  E L++F+ MQ+    PN+ TFV VL ACS+ GL + G  YF  M  +Y +EP +
Sbjct: 631 LHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQL 690

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
           EH+  MV +LGR+    +A K I  +PFQ   +IW+ LL  C I  +VEI  L+A ++L 
Sbjct: 691 EHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLL 750

Query: 642 FEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDT 690
            +P+D + ++LLSN+YA +  W   +            KEPG SWIE Q  +H F  GD 
Sbjct: 751 LDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDK 810

Query: 691 SHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVRED 728
           +H     +  ML  L  + + +GY PD SA   +V E+
Sbjct: 811 AHPRSGELYEMLNDLIGEMKLSGYEPD-SASFVEVDEE 847



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 154/564 (27%), Positives = 273/564 (48%), Gaps = 23/564 (4%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D  + N +L  Y     +  A  LFD MP+ + +S+   + GY     F E+V LF  + 
Sbjct: 82  DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 141

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
           R G   +   F   LK   ++    L   V A   K G + +   G+AL+D +  C  ++
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 201

Query: 210 FARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL 253
            A   F G+                 N+ +   L  F +M+ +G   +  ++A   ++C 
Sbjct: 202 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 261

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSF 313
            +  +   +  H  A+K  +  D  V  A++D+Y K+  +++ARR F  +P   V   + 
Sbjct: 262 AMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNA 321

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
           M+    +  L I+A+ LF  M ++ +  +  +   V  ACA  +G   G Q+H L ++ G
Sbjct: 322 MMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSG 381

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
              D+ V+NA++D+Y KC  +  +  +F    +++ V+WN +I    Q G     ++ F+
Sbjct: 382 FDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFN 441

Query: 434 KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCG 493
           +ML   +   + TY SVL+ACA+L +LE G+ VH   +K+    D  VA+ ++DMY KCG
Sbjct: 442 EMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCG 501

Query: 494 SITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLS 553
            I +A+ + D +     VSWNA++SG+S++  S E  K F  M   G +P++ TF  VL 
Sbjct: 502 IIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLD 561

Query: 554 ACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTS--MVSLLGRAGHLDKAAKLIEGIPFQP 611
            C+N   +E G+     ++    ++   + Y S  +V +  + G +  +  + E +  + 
Sbjct: 562 TCANLATIELGKQIHGQIIKQEMLD---DEYISSTLVDMYAKCGDMPDSLLVFEKVE-KR 617

Query: 612 SVMIWRALLGACIIHN-NVEIGRL 634
             + W A++    +H   VE  R+
Sbjct: 618 DFVSWNAMICGYALHGLGVEALRM 641



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 136/461 (29%), Positives = 237/461 (51%), Gaps = 20/461 (4%)

Query: 198 LIDAFSVCGCVEFARKVFDGLFN----------------DCFEEALNFFSQMRAVGFKPN 241
           ++ A+S  G +  A  +FDG+ +                  F+E+++ F +M   G  P+
Sbjct: 89  MLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPD 148

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
             TFA +LK+C  L+ + +    H  A+KT  E+D+    AL+D+Y K   + +A   F 
Sbjct: 149 RTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFY 208

Query: 302 EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL 361
            MP+++ + W   IA   Q +  +  +ELF  M++  +  +Q ++ S  ++CA M  L+ 
Sbjct: 209 GMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNT 268

Query: 362 GNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQ 421
           G Q+H+  ++    SD  V  A++DVYAK   + ++   F   P     T N M+VG V+
Sbjct: 269 GRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVR 328

Query: 422 LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVV 481
            G   +AM +F  M+   +    V+ S V  ACA       G QVHCL +K+ +D+D+ V
Sbjct: 329 AGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICV 388

Query: 482 ANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW 541
            NA++D+Y KC ++ +A L+F  M   + VSWNA+I+    +G   + +  F+ M + G 
Sbjct: 389 NNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGM 448

Query: 542 RPNNLTFVGVLSACSNGGLLEQG-EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKA 600
           +P++ T+  VL AC+    LE G   + K + +  G +  +   +++V +  + G +D+A
Sbjct: 449 KPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVA--STVVDMYCKCGIIDEA 506

Query: 601 AKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
            KL + I  Q  V+ W A+L    ++   E  +     +LD
Sbjct: 507 QKLHDRIGGQ-QVVSWNAILSGFSLNKESEEAQKFFSEMLD 546



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 230/443 (51%), Gaps = 39/443 (8%)

Query: 240 PNNFTFAFVLKACL--GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR 297
           P   TF+ V ++C   G + +   ++AH   + + +  + +V+  LL +Y +    + AR
Sbjct: 13  PARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPNAFVSNCLLQMYARCAGAACAR 72

Query: 298 RIFEEMPKKDVIPWSFMIARYAQT-DLSI------------------------------D 326
           R+F+ MP++D + W+ M+  Y+   D+S                               +
Sbjct: 73  RVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQE 132

Query: 327 AVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMD 386
           +V+LF  M +  V+P++ TF  +L++C+ +E L LG Q+H+L V+ GL  DV   +AL+D
Sbjct: 133 SVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVD 192

Query: 387 VYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVT 446
           +Y KC  +++++  F   P+RN V+W   I G VQ  +  + + +F +M    +  ++ +
Sbjct: 193 MYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPS 252

Query: 447 YSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN 506
           Y+S  R+CA+++ L  G Q+H   +K  +  D VV  A++D+YAK  S+TDAR  F  + 
Sbjct: 253 YASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLP 312

Query: 507 DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS-NGGLLEQGE 565
           +    + NAM+ G    GL  E + +F  M +   R + ++  GV SAC+   G  +  +
Sbjct: 313 NHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQ 372

Query: 566 AYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACII 625
            +  ++ + + ++ C+ +  +++ L G+   L +A  + +G+  + SV  W A++ A   
Sbjct: 373 VHCLAIKSGFDVDICVNN--AVLDLYGKCKALMEAYLIFQGMKQKDSVS-WNAIIAALEQ 429

Query: 626 HNNVEIGRLSAQHILDF--EPED 646
           + + +   L    +L F  +P+D
Sbjct: 430 NGHYDDTILHFNEMLRFGMKPDD 452



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 189/381 (49%), Gaps = 18/381 (4%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
           F+  S +    +C +         +HC  +K G  +D+   N +L++Y K   L +A  +
Sbjct: 349 FDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLI 408

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           F  M +++++S+   I     +  + + +  F+ + R G + + F + + LK   ++   
Sbjct: 409 FQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSL 468

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL--------------- 218
           E    V   V K G  S+AFV + ++D +  CG ++ A+K+ D +               
Sbjct: 469 EYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGF 528

Query: 219 -FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
             N   EEA  FFS+M  +G KP++FTFA VL  C  L TI + K  HG  +K     D 
Sbjct: 529 SLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDE 588

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
           Y++  L+D+Y K G++ ++  +FE++ K+D + W+ MI  YA   L ++A+ +F RM++ 
Sbjct: 589 YISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKE 648

Query: 338 FVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
            V PN  TFV+VL+AC+ +   D G    H +     L   +     ++D+  +    + 
Sbjct: 649 NVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQE 708

Query: 397 SVELFAESP-KRNHVTWNTMI 416
           +V+     P + + V W T++
Sbjct: 709 AVKFINSMPFQADAVIWKTLL 729



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 140/304 (46%), Gaps = 36/304 (11%)

Query: 339 VAPNQFTFVSVLQACATM--EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
           VAP + TF  V Q+CA    E L  G   H+ +V  G + + FVSN L+ +YA+C     
Sbjct: 11  VAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPNAFVSNCLLQMYARCAGAAC 70

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS----------------------- 433
           +  +F   P+R+ V+WNTM+  Y   G++  A+ +F                        
Sbjct: 71  ARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMF 130

Query: 434 --------KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANAL 485
                   +M    V     T++ +L++C++L  L  G+QVH L VK   ++DV   +AL
Sbjct: 131 QESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSAL 190

Query: 486 IDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNN 545
           +DMY KC S+ DA   F  M + N VSW A I+G   +      L++F  MQ+ G   + 
Sbjct: 191 VDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQ 250

Query: 546 LTFVGVLSACSNGGLLEQGEAYFKSMVAN-YGIEPCIEHYTSMVSLLGRAGHLDKAAKLI 604
            ++     +C+    L  G       + N +  +  +   T++V +  +A  L  A +  
Sbjct: 251 PSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVG--TAIVDVYAKANSLTDARRAF 308

Query: 605 EGIP 608
            G+P
Sbjct: 309 FGLP 312


>gi|225427070|ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
           [Vitis vinifera]
 gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera]
          Length = 605

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 211/588 (35%), Positives = 338/588 (57%), Gaps = 17/588 (2%)

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKS- 290
           Q   + FK        +LK C  ++     K +H   LK     D + A  L+     S 
Sbjct: 21  QSPELSFKLGEKECVSLLKKCSNMEEF---KQSHARILKLGLFGDSFCASNLVATCALSD 77

Query: 291 -GEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSV 349
            G +  A  IF +M +     ++ M+  + +   + +A+  +  M +  V P+ FT+ ++
Sbjct: 78  WGSMDYACSIFRQMDELGSFQFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTL 137

Query: 350 LQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNH 409
           L+ACA +  ++ G Q+H+ ++++GL +DVFV N+L+ +Y KCG +     +F +  +R+ 
Sbjct: 138 LKACARLPAVEEGMQVHAHILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSV 197

Query: 410 VTWNTMIVGYVQLGEVGKAMIMFSKMLEEQV-PATEVTYSSVLRACASLAALEPGMQVHC 468
            +W+ +I  +  LG     + +   M  E    A E    SVL AC  L AL+ G  VH 
Sbjct: 198 ASWSALITAHASLGMWSDCLRLLGDMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHG 257

Query: 469 LTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAE 528
             ++    ++V+V  +LI+MY KCGS+     +F  M   N++S++ MISG +MHG   E
Sbjct: 258 FLLRNVSGLNVIVETSLIEMYLKCGSLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGRE 317

Query: 529 VLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMV 588
            L++F  M ++G  P+++ +VGVL+ACS+ GL+++G   F  M   +GIEP I+HY  MV
Sbjct: 318 GLRIFTEMLEQGLEPDDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMV 377

Query: 589 SLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEA 648
            L+GRAG +D+A +LI+ +P +P+ ++WR+LL A  +HNN++ G ++A+ +   + +  +
Sbjct: 378 DLMGRAGKIDEALELIKSMPMEPNDVLWRSLLSASKVHNNLQAGEIAAKQLFKLDSQKAS 437

Query: 649 THVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNI 697
            +V+LSN+YA A+ WE           K  S+ PG S +E +  +H F + D  H     
Sbjct: 438 DYVVLSNMYAQAQRWEDVAKTRTNMFSKGLSQRPGFSLVEVKRKMHRFVSQDAGHPQSES 497

Query: 698 IRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIR 757
           +  ML  +  + +  GY PD + VL DV E+EK++ L  HS+KLA+A+AL      SPIR
Sbjct: 498 VYEMLYQMEWQLKFEGYSPDTTQVLCDVDEEEKKQRLSGHSQKLAIAYALIHTSQGSPIR 557

Query: 758 IIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           I++NLR+C DCHT  K+IS I  REI +RD HRFHHF+DG CSC D+W
Sbjct: 558 IVRNLRMCNDCHTYTKLISIIFDREITVRDRHRFHHFKDGACSCRDYW 605



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 183/366 (50%), Gaps = 25/366 (6%)

Query: 181 ACVYKLGHDSNAFVGTALID--AFSVCGCVEFARKVFDGL-------FNDCF-------- 223
           A + KLG   ++F  + L+   A S  G +++A  +F  +       FN           
Sbjct: 52  ARILKLGLFGDSFCASNLVATCALSDWGSMDYACSIFRQMDELGSFQFNTMMRGHVKDMN 111

Query: 224 -EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
            EEAL  + +M   G KP+NFT+  +LKAC  L  +      H   LK   E D++V  +
Sbjct: 112 TEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGLENDVFVQNS 171

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM-RQAFVAP 341
           L+ +Y K GEI     +FE+M ++ V  WS +I  +A   +  D + L   M  + +   
Sbjct: 172 LISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDMSNEGYWRA 231

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
            +   VSVL AC  +  LDLG  +H  ++R     +V V  +L+++Y KCG +   + LF
Sbjct: 232 EESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCGSLYKGMCLF 291

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
            +  K+N ++++ MI G    G   + + +F++MLE+ +   ++ Y  VL AC+    ++
Sbjct: 292 QKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGLVQ 351

Query: 462 PGMQVHCLT-VKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMI 517
            G+Q  C   +K  + ++  + +   ++D+  + G I +A  L+  M  + N+V W +++
Sbjct: 352 EGLQ--CFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLL 409

Query: 518 SGYSMH 523
           S   +H
Sbjct: 410 SASKVH 415



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/382 (22%), Positives = 169/382 (44%), Gaps = 38/382 (9%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKGNCLDLF-ATNVLLNVYVK-LNRLPDATKLFDEMPER 120
           L+ C   ++ + +   H ++LK G   D F A+N++    +     +  A  +F +M E 
Sbjct: 38  LKKCSNMEEFKQS---HARILKLGLFGDSFCASNLVATCALSDWGSMDYACSIFRQMDEL 94

Query: 121 NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVF 180
            +  F T ++G+       EA+  +  +   G + + F +   LK    +   E    V 
Sbjct: 95  GSFQFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVH 154

Query: 181 ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--------------------GLFN 220
           A + KLG +++ FV  +LI  +  CG +     VF+                    G+++
Sbjct: 155 AHILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWS 214

Query: 221 DCFEEALNFFSQMRAVGF-KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           DC    L     M   G+ +        VL AC  L  + + +S HG  L+    +++ V
Sbjct: 215 DC----LRLLGDMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIV 270

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
             +L+++Y K G +     +F++M KK+ + +S MI+  A      + + +F  M +  +
Sbjct: 271 ETSLIEMYLKCGSLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGL 330

Query: 340 APNQFTFVSVLQACA----TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
            P+   +V VL AC+      EGL   N++    +  G+   +     ++D+  + G+++
Sbjct: 331 EPDDIVYVGVLNACSHAGLVQEGLQCFNRMK---LEHGIEPTIQHYGCMVDLMGRAGKID 387

Query: 396 NSVELFAESP-KRNHVTWNTMI 416
            ++EL    P + N V W +++
Sbjct: 388 EALELIKSMPMEPNDVLWRSLL 409



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 77/346 (22%), Positives = 142/346 (41%), Gaps = 48/346 (13%)

Query: 20  KINAWLRGL-----SAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQT 74
           + N  +RG      + +A ++ ++ +     P  F+        Y T L++C +   ++ 
Sbjct: 98  QFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFT--------YPTLLKACARLPAVEE 149

Query: 75  AMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTV 134
            M +H  +LK G   D+F  N L+++Y K   +     +F++M ER+  S+   I  +  
Sbjct: 150 GMQVHAHILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHAS 209

Query: 135 SSQFVEAVGLFSTLHREGH-ELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAF 193
              + + + L   +  EG+         + L     +G  +L   V   + +     N  
Sbjct: 210 LGMWSDCLRLLGDMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVI 269

Query: 194 VGTALIDAFSVCGCV--------EFARK-------VFDGLFNDCF-EEALNFFSQMRAVG 237
           V T+LI+ +  CG +        + A+K       +  GL    +  E L  F++M   G
Sbjct: 270 VETSLIEMYLKCGSLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQG 329

Query: 238 FKPNNFTFAFVLKACL-------GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKS 290
            +P++  +  VL AC        GL      K  HG       E  +     ++DL  ++
Sbjct: 330 LEPDDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHG------IEPTIQHYGCMVDLMGRA 383

Query: 291 GEISNARRIFEEMPKK--DVIPWSFMIARYAQTDLS---IDAVELF 331
           G+I  A  + + MP +  DV+  S + A     +L    I A +LF
Sbjct: 384 GKIDEALELIKSMPMEPNDVLWRSLLSASKVHNNLQAGEIAAKQLF 429


>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
          Length = 863

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 254/738 (34%), Positives = 381/738 (51%), Gaps = 34/738 (4%)

Query: 95  NVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHE 154
           N +L++ V+      A ++F +MPER+  S+   + GY  S    EA+ L+  +   G  
Sbjct: 127 NAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVR 186

Query: 155 LNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKV 214
            + + F   L+    +    +   V A V + G      V  AL+  ++ CG V  ARKV
Sbjct: 187 PDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKV 246

Query: 215 FDGL-FNDC----------FEEA-----LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTI 258
           FD +   DC          FE       L  F  M     +PN  T   V  A   L  +
Sbjct: 247 FDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDV 306

Query: 259 RVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARY 318
             AK  HG A+K  +  D+    +L+ +Y   G +  AR +F  M  +D + W+ MI+ Y
Sbjct: 307 TFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGY 366

Query: 319 AQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDV 378
            +      A+E++  M    V+P+  T  S L ACA +  LD+G ++H L    G +S +
Sbjct: 367 EKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYI 426

Query: 379 FVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE 438
            V+NA++++YAK  R++ ++E+F    +++ V+W++MI G+       +A+  F  ML +
Sbjct: 427 VVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLAD 486

Query: 439 QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDA 498
             P   VT+ + L ACA+  AL  G ++H   ++   + +  + NALID+Y KCG    A
Sbjct: 487 VKP-NSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGYA 545

Query: 499 RLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNG 558
              F      + VSWN MI+G+  HG     L  F+ M + G  P+ +TFV +L ACS G
Sbjct: 546 WAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSRG 605

Query: 559 GLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRA 618
           G++ +G   F SM   Y I P ++HY  MV LL RAG L +A   I  +P  P   +W A
Sbjct: 606 GMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWGA 665

Query: 619 LLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----KEPGL 673
           LL  C IH +VE+G L+A+++L  EP D   HVLL ++YA A  W+K A      +E GL
Sbjct: 666 LLNGCRIHRHVELGELAAKYVLALEPNDAGYHVLLCDLYADACLWDKLARVRKTMREKGL 725

Query: 674 ------SWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVRE 727
                 SW+E +G+VH F   D SH  +  I  +LE +  + + +GY P    V     E
Sbjct: 726 DHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGYAP----VESHCPE 781

Query: 728 DE--KERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIII 785
           DE  K+     HSE+LA+AF L    P + I + KN   C  CH  +K+IS IV+R+II+
Sbjct: 782 DEVLKDDIFCGHSERLAVAFGLINTTPGTSISVTKNQYTCQSCHRILKMISNIVRRDIIV 841

Query: 786 RDVHRFHHFQDGCCSCGD 803
           RD  + HHF+DG CSCGD
Sbjct: 842 RDSKQLHHFKDGSCSCGD 859



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 131/490 (26%), Positives = 230/490 (46%), Gaps = 29/490 (5%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
           +++   L+SC    D +    +H  VL+ G   ++   N L+ +Y K   +  A K+FD 
Sbjct: 190 YTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDS 249

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
           M   + IS+   I G+  + +    + LF T+  +  + N    T+     V++    L 
Sbjct: 250 MTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITS-----VTVASGLLS 304

Query: 177 PCVFA-----CVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF---------------D 216
              FA        K G   +     +LI  ++  G +  AR VF                
Sbjct: 305 DVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMIS 364

Query: 217 GLFNDCF-EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
           G   + F ++AL  ++ M      P++ T A  L AC  L ++ V    H  A    +  
Sbjct: 365 GYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFIS 424

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
            + V  A+L++Y KS  I  A  +F+ M +KDV+ WS MIA +     + +A+  F R  
Sbjct: 425 YIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYF-RHM 483

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
            A V PN  TF++ L ACA    L  G +IH+ V+R G+  + ++ NAL+D+Y KCG+  
Sbjct: 484 LADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTG 543

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
            +   F     ++ V+WN MI G+V  G    A+  F++M++      EVT+ ++L AC+
Sbjct: 544 YAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACS 603

Query: 456 SLAALEPGMQV-HCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSW 513
               +  G ++ H +T K +   ++     ++D+ ++ G +T+A   + +M    +   W
Sbjct: 604 RGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVW 663

Query: 514 NAMISGYSMH 523
            A+++G  +H
Sbjct: 664 GALLNGCRIH 673



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 112/214 (52%)

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           P++  +V++ + C     ++ G +  +          + + NA++ +  + G   ++  +
Sbjct: 86  PDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLGNAMLSMLVRFGETWHAWRV 145

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           FA+ P+R+  +WN M+ GY + G + +A+ ++ +M+   V     T+  VLR+C  +   
Sbjct: 146 FAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDW 205

Query: 461 EPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY 520
             G +VH   ++  +  +V V NAL+ MYAKCG +  AR VFD M   + +SWNAMI+G+
Sbjct: 206 RMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIAGH 265

Query: 521 SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSA 554
             +G     L++F  M     +PN +T   V  A
Sbjct: 266 FENGECNAGLELFLTMLHDEVQPNLMTITSVTVA 299



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 87/200 (43%), Gaps = 5/200 (2%)

Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
           G++ +A+ +     E   P  E  Y ++ R C    A+EPG++        +    + + 
Sbjct: 70  GQLAQALWLLESSAE---PPDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLG 126

Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
           NA++ M  + G    A  VF  M + +  SWN M+ GY   GL  E L ++  M   G R
Sbjct: 127 NAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVR 186

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           P+  TF  VL +C        G     + V  +G    ++   +++++  + G +  A K
Sbjct: 187 PDVYTFPCVLRSCGGVPDWRMGRE-VHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARK 245

Query: 603 LIEGIPFQPSVMIWRALLGA 622
           + + +     +  W A++  
Sbjct: 246 VFDSMTVMDCIS-WNAMIAG 264


>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
 gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
          Length = 643

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 231/659 (35%), Positives = 358/659 (54%), Gaps = 71/659 (10%)

Query: 179 VFACVYKLGHDSNAFVGTALID--AFSVCGCVEFARKVFD---------------GLF-N 220
           + A V KLG +S+ F+   L+   A S+   +++A ++F                GL+ +
Sbjct: 24  IHANVLKLGLESDPFIAGKLLHHCAISLSDSLDYACRLFRYTPNPDVFMHNTLIRGLYES 83

Query: 221 DCFEEALNFFSQMRAVGFKP-NNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           D  +++L  F +MR   F P ++F+FAF++KA   L ++RV    H  AL    +  L+V
Sbjct: 84  DRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRSVRVGIQLHCQALVHGLDTHLFV 143

Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
              L+ +Y + G +  AR++F+EMP+ + I W+ M+                        
Sbjct: 144 GTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVT----------------------- 180

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
                       AC     +  G ++  L+    L+S     N ++  Y K G +E + E
Sbjct: 181 ------------ACCRGGDMKGGRELFDLMPVRNLMS----WNVMLAGYTKAGELELARE 224

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +F E P ++ V+W+TMIVG+   G   +A   F ++  + +   E + + VL ACA   A
Sbjct: 225 MFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGA 284

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFD-MMNDWNEVSWNAMIS 518
           LE G  +H    K+     V V NAL+D Y+KCG++  A+LVF+ +MN+ N VSW +M++
Sbjct: 285 LEFGKILHGFIEKSGLAWIVSVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMA 344

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
             +MHG   E + +F  M++ G RP+ + F+ +L ACS+ GL+EQG  YF  M   Y IE
Sbjct: 345 ALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLYACSHAGLVEQGCEYFDKMKGMYNIE 404

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P IEHY  MV L GRAG L KA + +  +P   + +IWR LLGAC +H +V++     + 
Sbjct: 405 PSIEHYGCMVDLYGRAGQLQKAYEFVCQMPIPCTAIIWRTLLGACSMHGDVKLAEQVKER 464

Query: 639 ILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRA 687
           + + +P + + HVLLSN YA+A  W+ AAS           K PG S IE   +++ F A
Sbjct: 465 LSELDPNNSSDHVLLSNAYAVAGKWKDAASVRRSMTEQRITKTPGWSMIEVDKIMYTFLA 524

Query: 688 GDTSHADMNIIRGMLEWLNMKSR-KAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFA 746
           G   +         L+ +  + R + GY+P++  VL D+ E+EKE  + VHSEKLA+AF 
Sbjct: 525 GTKQYKITEEAYKKLKEIIRRLRVEGGYVPEIGRVLHDIEEEEKEGSVSVHSEKLAVAFG 584

Query: 747 LFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           + ++     IRI+KNLRIC DCH  +K+IS+I + EI++RD  RFH F+DG CSC D+W
Sbjct: 585 IARLCKGRTIRIVKNLRICRDCHAVMKLISQIYKVEIVVRDRSRFHSFKDGYCSCRDYW 643



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 128/467 (27%), Positives = 210/467 (44%), Gaps = 45/467 (9%)

Query: 72  LQTAMTIHCQVLKKGNCLDLF-ATNVLLNVYVKL-NRLPDATKLFDEMPERNTISFVTTI 129
           L T   IH  VLK G   D F A  +L +  + L + L  A +LF   P  +     T I
Sbjct: 18  LTTFKQIHANVLKLGLESDPFIAGKLLHHCAISLSDSLDYACRLFRYTPNPDVFMHNTLI 77

Query: 130 QGYTVSSQFVEAVGLFSTLHREGHEL-NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGH 188
           +G   S +  +++  F  + R      + F+F   +K   ++    +   +       G 
Sbjct: 78  RGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRSVRVGIQLHCQALVHGL 137

Query: 189 DSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFV 248
           D++ FVGT LI  +  CG V FARKVFD +                    +PN   +  +
Sbjct: 138 DTHLFVGTTLISMYGECGFVGFARKVFDEMP-------------------EPNAIAWNAM 178

Query: 249 LKACLGLDTIRVAKSAHGCALKTCYEM-------DLYVAVALLDLYTKSGEISNARRIFE 301
           + AC             G  +K   E+       +L     +L  YTK+GE+  AR +F 
Sbjct: 179 VTAC-----------CRGGDMKGGRELFDLMPVRNLMSWNVMLAGYTKAGELELAREMFL 227

Query: 302 EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL 361
           EMP KD + WS MI  +A      +A   F  +++  + PN+ +   VL ACA    L+ 
Sbjct: 228 EMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEF 287

Query: 362 GNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE-SPKRNHVTWNTMIVGYV 420
           G  +H  + + GL   V V+NAL+D Y+KCG +  +  +F     +RN V+W +M+    
Sbjct: 288 GKILHGFIEKSGLAWIVSVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALA 347

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV 480
             G   +A+ +F KM E  +   E+ + S+L AC+    +E G + +   +K  Y+++  
Sbjct: 348 MHGHGEEAIGIFHKMEESGIRPDEIAFISLLYACSHAGLVEQGCE-YFDKMKGMYNIEPS 406

Query: 481 VAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHG 524
           + +   ++D+Y + G +  A   V  M      + W  ++   SMHG
Sbjct: 407 IEHYGCMVDLYGRAGQLQKAYEFVCQMPIPCTAIIWRTLLGACSMHG 453



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 137/294 (46%), Gaps = 18/294 (6%)

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMD--VYAKCGRMENSVELFAES 404
           +S+L  C ++       QIH+ V+++GL SD F++  L+     +    ++ +  LF  +
Sbjct: 9   LSLLNICKSLTTF---KQIHANVLKLGLESDPFIAGKLLHHCAISLSDSLDYACRLFRYT 65

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQV-PATEVTYSSVLRACASLAALEPG 463
           P  +    NT+I G  +      +++ F +M      P    +++ +++A A+L ++  G
Sbjct: 66  PNPDVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRSVRVG 125

Query: 464 MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMH 523
           +Q+HC  +    D  + V   LI MY +CG +  AR VFD M + N ++WNAM++     
Sbjct: 126 IQLHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACCRG 185

Query: 524 GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEH 583
           G      ++FDLM  R    N +++  +L+  +  G LE     F  M     +      
Sbjct: 186 GDMKGGRELFDLMPVR----NLMSWNVMLAGYTKAGELELAREMFLEMPMKDDVS----- 236

Query: 584 YTSMVSLLGRAGHLDKAAKLIEGIP---FQPSVMIWRALLGACIIHNNVEIGRL 634
           +++M+      G+ ++A      +     +P+      +L AC     +E G++
Sbjct: 237 WSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFGKI 290



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 80/353 (22%), Positives = 129/353 (36%), Gaps = 94/353 (26%)

Query: 50  SVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD 109
           S S  +S S+A  +++      ++  + +HCQ L  G    LF    L+++Y +   +  
Sbjct: 100 SFSPPDSFSFAFIVKAAANLRSVRVGIQLHCQALVHGLDTHLFVGTTLISMYGECGFVGF 159

Query: 110 ATKLFDEMPE-------------------------------RNTISFVTTIQGYTVSSQ- 137
           A K+FDEMPE                               RN +S+   + GYT + + 
Sbjct: 160 ARKVFDEMPEPNAIAWNAMVTACCRGGDMKGGRELFDLMPVRNLMSWNVMLAGYTKAGEL 219

Query: 138 ------------------------------FVEAVGLFSTLHREGHELNPFAFTAFLKVL 167
                                         F EA   F  L R+G   N  + T  L   
Sbjct: 220 ELAREMFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSAC 279

Query: 168 VSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND------ 221
              G  E    +   + K G      V  AL+D +S CG V  A+ VF+ + N+      
Sbjct: 280 AQAGALEFGKILHGFIEKSGLAWIVSVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSW 339

Query: 222 -----------CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGC--- 267
                        EEA+  F +M   G +P+   F  +L AC     +       GC   
Sbjct: 340 TSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLYACSHAGLVE-----QGCEYF 394

Query: 268 -ALKTCYEMDLYVA--VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIAR 317
             +K  Y ++  +     ++DLY ++G++  A     +MP    IP + +I R
Sbjct: 395 DKMKGMYNIEPSIEHYGCMVDLYGRAGQLQKAYEFVCQMP----IPCTAIIWR 443


>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
 gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
          Length = 673

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 233/667 (34%), Positives = 353/667 (52%), Gaps = 42/667 (6%)

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDC 222
           V A V K G     FV + L++ ++ CG +  ARKVFD L                 N  
Sbjct: 2   VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
            E A+  F  M   G  P+NFT +  L AC  L++I + K  H   +K     D  +  A
Sbjct: 62  PEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNA 121

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L  LY+K G + ++ + F E  +KDVI W+ +I+       +   + LF  M    V PN
Sbjct: 122 LCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPN 181

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
            FT  SVL  C+T++  DLG Q+HSL  ++G  S++ ++N+L+ +Y KCG ++ +  LF 
Sbjct: 182 DFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFN 241

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGK-----------AMIMFSKMLEEQVPATEVTYSSVL 451
               +N +TWN MI G+ Q  ++ K           A+ M+ K+          T SS+L
Sbjct: 242 RMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSIL 301

Query: 452 RACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEV 511
             C+ LAALE G Q+H  T+K+ +  DVVV  AL+DMY KCGSI  AR  F  M+    +
Sbjct: 302 TVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLI 361

Query: 512 SWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSM 571
           SW +MI+ ++ HG S   L++F+ M+  G+RPN +TFVGVL+ACS+ G++++   YF+ M
Sbjct: 362 SWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIM 421

Query: 572 VANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEI 631
              Y I+P ++HY  +V +  R G LD+A  +I+ +  +P+  IW  L+  C  H N E+
Sbjct: 422 QKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGNEEL 481

Query: 632 GRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQG 680
           G  +A+ +L  +P    T+V+L N+Y  A  WE  +            K    S I  +G
Sbjct: 482 GFYAAEQLLKLKPRSTETYVVLLNMYISAERWEDVSMVRRLMKEEKVGKLKDWSRISIKG 541

Query: 681 MVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIP-DLSAVLRDVREDEKERYLW---V 736
            VH F+  +  H     +  +L  L  +++  GY   +   V+ D  E+ +E+       
Sbjct: 542 EVHSFKTNNRLHNHNAELHTLLNDLVDRAKSLGYEQLENMEVIDDEEEEAEEKAFSSAVY 601

Query: 737 HSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQD 796
           HSEKLA+ F L   P  +PIR+IK++ +C DCH  +K++S    R III+D  R H F +
Sbjct: 602 HSEKLAVTFGLLNTPIGAPIRVIKSVTMCKDCHDFMKVVSSQTTRHIIIKDGKRLHKFVN 661

Query: 797 GCCSCGD 803
           G CSC D
Sbjct: 662 GQCSCAD 668



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 134/479 (27%), Positives = 233/479 (48%), Gaps = 35/479 (7%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           +H  V+K G   + F  + L+NVY K   + +A K+FD +P RN + + T + GY  +SQ
Sbjct: 2   VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61

Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACV--YKLGHDSNAFVG 195
              AV +F  +   G   + F  +  L    S+    L     A +  Y++ HDS+  +G
Sbjct: 62  PEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSS--IG 119

Query: 196 TALIDAFSVCGCVEFARKVF-----------DGLFNDCFEE-----ALNFFSQMRAVGFK 239
            AL   +S  G ++ + K F             + + C +       L  F +M     +
Sbjct: 120 NALCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVE 179

Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
           PN+FT   VL  C  + +  +    H  + K  +E +L +  +L+ LY K G I  A+ +
Sbjct: 180 PNDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNL 239

Query: 300 FEEMPKKDVIPWSFMIARYAQT-DLSID----------AVELFCRMRQAFVAPNQFTFVS 348
           F  M  K++I W+ MIA +AQ  DL+ D          A+ ++ ++ ++   P+ FT  S
Sbjct: 240 FNRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSS 299

Query: 349 VLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRN 408
           +L  C+ +  L+ G QIH+  ++ G LSDV V  AL+D+Y KCG +E + + F +   R 
Sbjct: 300 ILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRT 359

Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHC 468
            ++W +MI  + + G+   A+ +F  M        ++T+  VL AC+    ++  ++   
Sbjct: 360 LISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFE 419

Query: 469 LTVKANYDMDVVVAN--ALIDMYAKCGSITDARLVFDMMN-DWNEVSWNAMISGYSMHG 524
           +  K  Y +  V+ +   L+DM+ + G + +A  V   M+ + NE  W  +I+G   HG
Sbjct: 420 IMQK-EYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHG 477



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 108/423 (25%), Positives = 190/423 (44%), Gaps = 30/423 (7%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           + + +L +C   + +      H  ++K     D    N L ++Y K   L  + K F E 
Sbjct: 83  TLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNALCSLYSKFGSLDSSVKAFRET 142

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
            E++ IS+ T I     + +    + LF  +  E  E N F  T+ L +  ++  ++L  
Sbjct: 143 GEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPNDFTLTSVLSLCSTIQSSDLGM 202

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--------------------- 216
            V +   KLGH+SN  +  +L+  +  CGC++ A+ +F+                     
Sbjct: 203 QVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFNRMEYKNLITWNAMIAGHAQAM 262

Query: 217 GLFNDCFE------EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALK 270
            L  D F       EAL  + ++   G KP+ FT + +L  C  L  +   +  H   +K
Sbjct: 263 DLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSILTVCSRLAALEQGEQIHAQTIK 322

Query: 271 TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVEL 330
           + +  D+ V  AL+D+Y K G I  AR+ F +M  + +I W+ MI  +A+   S  A++L
Sbjct: 323 SGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLISWTSMITSFARHGQSQHALQL 382

Query: 331 FCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVS-NALMDVYA 389
           F  MR A   PNQ TFV VL AC+    +D   +   ++ +   +  V      L+D++ 
Sbjct: 383 FEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIMQKEYKIKPVMDHYGCLVDMFV 442

Query: 390 KCGRMENSVELFAE-SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYS 448
           + GR++ + ++      + N   W  +I G    G          ++L+ +  +TE TY 
Sbjct: 443 RLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGNEELGFYAAEQLLKLKPRSTE-TYV 501

Query: 449 SVL 451
            +L
Sbjct: 502 VLL 504


>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
          Length = 1229

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 232/644 (36%), Positives = 341/644 (52%), Gaps = 65/644 (10%)

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMR 234
           N+ +G  L+ A++    V  ARKVFD +                 N  + E +  F  M 
Sbjct: 73  NSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMC 132

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
               +P+++TF  VLKAC    TI + +  HG A K      L+V   L+ +Y K G +S
Sbjct: 133 GCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLS 192

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
            AR + +EM ++DV+ W+ ++  YAQ     DA+E+   M    ++ +  T  S+L A  
Sbjct: 193 EARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA-- 250

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
                               +S+    N +   Y K        ++F +  K++ V+WN 
Sbjct: 251 --------------------VSNTTTENVM---YVK--------DMFFKMGKKSLVSWNV 279

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
           MI  Y++     +A+ ++S+M  +      V+ +SVL AC   +AL  G ++H    +  
Sbjct: 280 MIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKK 339

Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
              ++++ NALIDMYAKCG +  AR VF+ M   + VSW AMIS Y   G   + + +F 
Sbjct: 340 LIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFS 399

Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
            +Q  G  P+++ FV  L+ACS+ GLLE+G + FK M  +Y I P +EH   MV LLGRA
Sbjct: 400 KLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRA 459

Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLS 654
           G + +A + I+ +  +P+  +W ALLGAC +H++ +IG L+A  +    PE    +VLLS
Sbjct: 460 GKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLS 519

Query: 655 NIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLE 703
           NIYA A  WE           K   K PG S +E   ++H F  GD SH   + I   L+
Sbjct: 520 NIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELD 579

Query: 704 WLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMP-----PSSPIRI 758
            L  K ++ GY+PD  + L DV E++KE +L VHSEKLA+ FAL          ++ IRI
Sbjct: 580 VLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRI 639

Query: 759 IKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCG 802
            KNLRIC DCH A K+IS+I  REIIIRD +RFH F+ G CSC 
Sbjct: 640 TKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCA 683



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 123/457 (26%), Positives = 215/457 (47%), Gaps = 23/457 (5%)

Query: 71  DLQTAMTIHCQV-LKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTI 129
           D++T  T+H ++ L+   C        L+  Y  L  +  A K+FDE+PERN I     I
Sbjct: 54  DIRTLRTVHSRIILEDLRCNSSLGVK-LMRAYASLKDVASARKVFDEIPERNVIIINVMI 112

Query: 130 QGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHD 189
           + Y  +  + E V +F T+       + + F   LK     G   +   +     K+G  
Sbjct: 113 RSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLS 172

Query: 190 SNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVL 249
           S  FVG  L+  +  CG +  AR V D +      + +++ S +  VG+  N   F   L
Sbjct: 173 STLFVGNGLVSMYGKCGFLSEARLVLDEMSR---RDVVSWNSLV--VGYAQNQ-RFDDAL 226

Query: 250 KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
           + C  +++++++  A   A        L  AV+     T +  +   + +F +M KK ++
Sbjct: 227 EVCREMESVKISHDAGTMA-------SLLPAVS----NTTTENVMYVKDMFFKMGKKSLV 275

Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
            W+ MI  Y +  + ++AVEL+ RM      P+  +  SVL AC     L LG +IH  +
Sbjct: 276 SWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYI 335

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAM 429
            R  L+ ++ + NAL+D+YAKCG +E + ++F     R+ V+W  MI  Y   G    A+
Sbjct: 336 ERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAV 395

Query: 430 IMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALID 487
            +FSK+ +  +    + + + L AC+    LE G     L    +Y +   + +   ++D
Sbjct: 396 ALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTD-HYKITPRLEHLACMVD 454

Query: 488 MYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
           +  + G + +A R + DM  + NE  W A++    +H
Sbjct: 455 LLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVH 491



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 94/371 (25%), Positives = 174/371 (46%), Gaps = 38/371 (10%)

Query: 255 LDT---IRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPW 311
           LDT   IR  ++ H   +      +  + V L+  Y    ++++AR++F+E+P+++VI  
Sbjct: 49  LDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIII 108

Query: 312 SFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR 371
           + MI  Y       + V++F  M    V P+ +TF  VL+AC+    + +G +IH    +
Sbjct: 109 NVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATK 168

Query: 372 VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIM 431
           VGL S +FV N L+ +Y KCG +  +  +  E  +R+ V+WN+++VGY Q      A+ +
Sbjct: 169 VGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEV 228

Query: 432 FSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAK 491
             +M   ++     T +S+L A ++             T   N             MY K
Sbjct: 229 CREMESVKISHDAGTMASLLPAVSN-------------TTTENV------------MYVK 263

Query: 492 CGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGV 551
                    +F  M   + VSWN MI  Y  + +  E ++++  M+  G+ P+ ++   V
Sbjct: 264 D--------MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSV 315

Query: 552 LSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQP 611
           L AC +   L  G+      +    + P +    +++ +  + G L+KA  + E +  + 
Sbjct: 316 LPACGDTSALSLGKK-IHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSR- 373

Query: 612 SVMIWRALLGA 622
            V+ W A++ A
Sbjct: 374 DVVSWTAMISA 384



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/369 (25%), Positives = 167/369 (45%), Gaps = 29/369 (7%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           + +++   L++C  +  +     IH    K G    LF  N L+++Y K   L +A  + 
Sbjct: 139 DHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVL 198

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFT-AFLKVLVSMGWA 173
           DEM  R+ +S+ + + GY  + +F +A+ +   +  E  +++  A T A L   VS    
Sbjct: 199 DEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM--ESVKISHDAGTMASLLPAVSNTTT 256

Query: 174 ELCPCVFACVYKLGHDS----NAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNF 229
           E    V    +K+G  S    N  +G  + +A  V                    EA+  
Sbjct: 257 ENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPV--------------------EAVEL 296

Query: 230 FSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK 289
           +S+M A GF+P+  +   VL AC     + + K  HG   +     +L +  AL+D+Y K
Sbjct: 297 YSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAK 356

Query: 290 SGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSV 349
            G +  AR +FE M  +DV+ W+ MI+ Y  +    DAV LF +++ + + P+   FV+ 
Sbjct: 357 CGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTT 416

Query: 350 LQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALM-DVYAKCGRMENSVELFAE-SPKR 407
           L AC+    L+ G     L+     ++      A M D+  + G+++ +     + S + 
Sbjct: 417 LAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEP 476

Query: 408 NHVTWNTMI 416
           N   W  ++
Sbjct: 477 NERVWGALL 485


>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
          Length = 1866

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 220/572 (38%), Positives = 329/572 (57%), Gaps = 13/572 (2%)

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           +AL FF+ MR  G  PN++TF+ VL AC         +  H    K  +  +++V  AL+
Sbjct: 113 KALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALV 172

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELF-CRMRQAFVAPNQ 343
           D+Y K  ++  A ++FEEMP ++++ W+ MI  + Q  L   A+  F   + +   A ++
Sbjct: 173 DMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDE 232

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
            +F SV  ACA    L+ G Q+H + +++G+ + V+++N+L D+Y KCG   +  +LF+ 
Sbjct: 233 VSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSN 292

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
           +  R+ VTWN MI+ YV       A   F  M  +     E +YSSVL +CA+LAAL  G
Sbjct: 293 TGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQG 352

Query: 464 MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMH 523
             +H   +++ +  ++ VA++LI MYAKCGS+ DA  +F+   D N V W A+I+    H
Sbjct: 353 TLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQH 412

Query: 524 GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEH 583
           G +  V+++F+ M + G +P+ +TFV VLSACS+ G +E+G  YF SM+  +GI P  EH
Sbjct: 413 GHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEH 472

Query: 584 YTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFE 643
           Y  +V LL RAG LD+A + IE +P +P   +W ALL AC  H+N+ +G+  A  + D E
Sbjct: 473 YACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFDLE 532

Query: 644 PEDEATHVLLSNIYA----------MARSWEK-AASKEPGLSWIENQGMVHYFRAGDTSH 692
           P++   +VLL NI            + R  E     KEPG SWI+ +   + F   D SH
Sbjct: 533 PDNPGNYVLLCNILTRNGMLNEADEVRRKMESIGVRKEPGCSWIDIKNSTYVFTVHDKSH 592

Query: 693 ADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPP 752
                I  MLE L    +K GY+ +    + +  E+ KE+ LW HSEK+ALAF L  +P 
Sbjct: 593 EKTKEIYEMLEKLKELVKKKGYVAETEFAI-NTAEEYKEQSLWYHSEKIALAFGLLSLPA 651

Query: 753 SSPIRIIKNLRICVDCHTAIKIISKIVQREII 784
            +PIRI KNLR C DCHT +K  S+I  REII
Sbjct: 652 GAPIRIKKNLRTCGDCHTVMKFASEIFAREII 683



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/349 (33%), Positives = 187/349 (53%), Gaps = 5/349 (1%)

Query: 283 LLDLYTKSGEISNARRIFEEMP--KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
           LL+LY K G +     +F   P   K+V+ W+ +I +  +      A+  F  MR++ V 
Sbjct: 68  LLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVY 127

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           PN +TF +VL AC        G Q+HSLV + G L++VFV +AL+D+YAKC  M  + ++
Sbjct: 128 PNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKV 187

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPA-TEVTYSSVLRACASLAA 459
           F E P RN V+WNTMIVG++Q     +A+  F  +L E + A  EV++SSV  ACA+   
Sbjct: 188 FEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGN 247

Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
           LE G QVH + +K      V + N+L DMY KCG   D   +F      + V+WN MI  
Sbjct: 248 LEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMA 307

Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
           Y  +    +    F +M+++G  P+  ++  VL +C+N   L QG     + +   G   
Sbjct: 308 YVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQG-TLIHNQIIRSGFVK 366

Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
            +   +S++++  + G L  A ++ E    + +V+ W A++ AC  H +
Sbjct: 367 NLRVASSLITMYAKCGSLVDAFQIFEETEDR-NVVCWTAIIAACQQHGH 414



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 145/568 (25%), Positives = 259/568 (45%), Gaps = 56/568 (9%)

Query: 46  PITFSVSEFNSHSYAT----------SLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATN 95
           P+  ++S F SH + T          SL +C +    + A  IH Q++        F  N
Sbjct: 9   PLHPNLSFFKSHYHQTPFLHPLTSLNSLLNCSRTS--KHATQIHSQLITTALLSLPFLFN 66

Query: 96  VLLNVYVKLNRLPDATKLFDEMPE--RNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGH 153
            LLN+Y K   +     LF   P+  +N +S+ + I   T   +  +A+  F+ + R G 
Sbjct: 67  NLLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGV 126

Query: 154 ELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARK 213
             N + F+A L        +     + + V+K G  +  FV +AL+D ++ C  +  A K
Sbjct: 127 YPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEK 186

Query: 214 VFDG----------------LFNDCFEEALNFFSQMRAVGFKP-NNFTFAFVLKACLGLD 256
           VF+                 L N  +++A+ FF  +        +  +F+ V  AC    
Sbjct: 187 VFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAG 246

Query: 257 TIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIA 316
            +   K  HG ALK      +Y+  +L D+Y K G  ++  ++F     +DV+ W+ MI 
Sbjct: 247 NLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIM 306

Query: 317 RYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLS 376
            Y       DA   F  MR+    P++ ++ SVL +CA +  L  G  IH+ ++R G + 
Sbjct: 307 AYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVK 366

Query: 377 DVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML 436
           ++ V+++L+ +YAKCG + ++ ++F E+  RN V W  +I    Q G     + +F +ML
Sbjct: 367 NLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQML 426

Query: 437 EEQVPATEVTYSSVLRACASLAALEPG-------MQVHCLTVKANYDMDVVVANALIDMY 489
            E +    +T+ SVL AC+    +E G       ++VH +     +         ++D+ 
Sbjct: 427 REGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEH------YACIVDLL 480

Query: 490 AKCGSITDARLVFDMMNDWNEVS-WNAMISGYSMHG---LSAEV-LKVFDLMQQRGWRPN 544
           ++ G +  A+   ++M    + S W A++S    H    +  EV LK+FDL       P+
Sbjct: 481 SRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFDL------EPD 534

Query: 545 NL-TFVGVLSACSNGGLLEQGEAYFKSM 571
           N   +V + +  +  G+L + +   + M
Sbjct: 535 NPGNYVLLCNILTRNGMLNEADEVRRKM 562



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 139/272 (51%), Gaps = 5/272 (1%)

Query: 362 GNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP--KRNHVTWNTMIVGY 419
             QIHS ++   LLS  F+ N L+++YAKCG ++ ++ LF+ +P   +N V+W ++I   
Sbjct: 46  ATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLITQL 105

Query: 420 VQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDV 479
            +     KA+  F+ M    V     T+S+VL AC    A   G Q+H L  K  +  +V
Sbjct: 106 TRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEV 165

Query: 480 VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD-LMQQ 538
            V +AL+DMYAKC  +  A  VF+ M   N VSWN MI G+  + L  + +  F  L+ +
Sbjct: 166 FVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLE 225

Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLD 598
                + ++F  V SAC+N G LE G+     +    G+   +    S+  + G+ G  +
Sbjct: 226 NLTALDEVSFSSVFSACANAGNLEFGKQ-VHGVALKLGVWNLVYINNSLSDMYGKCGLFN 284

Query: 599 KAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
             AKL      +  V+ W  ++ A + ++N E
Sbjct: 285 DVAKLFSNTGAR-DVVTWNIMIMAYVYNHNYE 315


>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
 gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
          Length = 863

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 232/698 (33%), Positives = 370/698 (53%), Gaps = 28/698 (4%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           ++A  L+SC   ++L   + +H   +K G  +D+   + L+++Y K   L DA   F  M
Sbjct: 151 TFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGM 210

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
           PERN +S+   I G   + Q+V  + LF  + R G  ++  ++ +  +   +M       
Sbjct: 211 PERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGR 270

Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFE------------- 224
            + A   K    S+  VGTA++D ++    +  AR+ F GL N   E             
Sbjct: 271 QLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAG 330

Query: 225 ---EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
              EA+  F  M     + +  + + V  AC         +  H  A+K+ +++D+ V  
Sbjct: 331 LGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNN 390

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           A+LDLY K   +  A  IF+ M +KD + W+ +IA   Q     D +  F  M +  + P
Sbjct: 391 AVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKP 450

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           + FT+ SVL+ACA +  L+ G  +H  V++ GL SD FV++ ++D+Y KCG ++ + +L 
Sbjct: 451 DDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLH 510

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
                +  V+WN ++ G+    E  +A   FS+ML+  +     T+++VL  CA+LA +E
Sbjct: 511 DRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIE 570

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
            G Q+H   +K     D  +++ L+DMYAKCG + D+ LVF+ +   + VSWNAMI GY+
Sbjct: 571 LGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYA 630

Query: 522 MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
           +HGL  E L++F+ MQ+    PN+ TFV VL ACS+ GL + G  YF  M  +Y +EP +
Sbjct: 631 LHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQL 690

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
           EH+  MV +LGR+    +A K I  +PFQ   +IW+ LL  C I  +VEI  L+A ++L 
Sbjct: 691 EHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLL 750

Query: 642 FEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDT 690
            +P+D + ++LLSN+YA +  W   +            KEPG SWIE Q  +H F  GD 
Sbjct: 751 LDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDK 810

Query: 691 SHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVRED 728
           +H     +  ML  L  + + +GY PD SA   +V E+
Sbjct: 811 AHPRSGELYEMLNDLIGEMKLSGYEPD-SASFVEVDEE 847



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 154/564 (27%), Positives = 273/564 (48%), Gaps = 23/564 (4%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D  + N +L  Y     +  A  LFD MP+ + +S+   + GY     F E+V LF  + 
Sbjct: 82  DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 141

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
           R G   +   F   LK   ++    L   V A   K G + +   G+AL+D +  C  ++
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 201

Query: 210 FARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL 253
            A   F G+                 N+ +   L  F +M+ +G   +  ++A   ++C 
Sbjct: 202 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 261

Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSF 313
            +  +   +  H  A+K  +  D  V  A++D+Y K+  +++ARR F  +P   V   + 
Sbjct: 262 AMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNA 321

Query: 314 MIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
           M+    +  L I+A+ LF  M ++ +  +  +   V  ACA  +G   G Q+H L ++ G
Sbjct: 322 MMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSG 381

Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
              D+ V+NA++D+Y KC  +  +  +F    +++ V+WN +I    Q G     ++ F+
Sbjct: 382 FDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFN 441

Query: 434 KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCG 493
           +ML   +   + TY SVL+ACA+L +LE G+ VH   +K+    D  VA+ ++DMY KCG
Sbjct: 442 EMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCG 501

Query: 494 SITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLS 553
            I +A+ + D +     VSWNA++SG+S++  S E  K F  M   G +P++ TF  VL 
Sbjct: 502 IIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLD 561

Query: 554 ACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTS--MVSLLGRAGHLDKAAKLIEGIPFQP 611
            C+N   +E G+     ++    ++   + Y S  +V +  + G +  +  + E +  + 
Sbjct: 562 TCANLATIELGKQIHGQIIKQEMLD---DEYISSTLVDMYAKCGDMPDSLLVFEKVE-KR 617

Query: 612 SVMIWRALLGACIIHN-NVEIGRL 634
             + W A++    +H   VE  R+
Sbjct: 618 DFVSWNAMICGYALHGLGVEALRM 641



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 136/461 (29%), Positives = 237/461 (51%), Gaps = 20/461 (4%)

Query: 198 LIDAFSVCGCVEFARKVFDGLFN----------------DCFEEALNFFSQMRAVGFKPN 241
           ++ A+S  G +  A  +FDG+ +                  F+E+++ F +M   G  P+
Sbjct: 89  MLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPD 148

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
             TFA +LK+C  L+ + +    H  A+KT  E+D+    AL+D+Y K   + +A   F 
Sbjct: 149 RTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFY 208

Query: 302 EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL 361
            MP+++ + W   IA   Q +  +  +ELF  M++  +  +Q ++ S  ++CA M  L+ 
Sbjct: 209 GMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNT 268

Query: 362 GNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQ 421
           G Q+H+  ++    SD  V  A++DVYAK   + ++   F   P     T N M+VG V+
Sbjct: 269 GRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVR 328

Query: 422 LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVV 481
            G   +AM +F  M+   +    V+ S V  ACA       G QVHCL +K+ +D+D+ V
Sbjct: 329 AGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICV 388

Query: 482 ANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW 541
            NA++D+Y KC ++ +A L+F  M   + VSWNA+I+    +G   + +  F+ M + G 
Sbjct: 389 NNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGM 448

Query: 542 RPNNLTFVGVLSACSNGGLLEQG-EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKA 600
           +P++ T+  VL AC+    LE G   + K + +  G +  +   +++V +  + G +D+A
Sbjct: 449 KPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVA--STVVDMYCKCGIIDEA 506

Query: 601 AKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
            KL + I  Q  V+ W A+L    ++   E  +     +LD
Sbjct: 507 QKLHDRIGGQ-QVVSWNAILSGFSLNKESEEAQKFFSEMLD 546



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 229/443 (51%), Gaps = 39/443 (8%)

Query: 240 PNNFTFAFVLKACL--GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR 297
           P   TF+ V ++C   G + +   ++AH   + + +    +V+  LL +Y +    + AR
Sbjct: 13  PARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAACAR 72

Query: 298 RIFEEMPKKDVIPWSFMIARYAQT-DLSI------------------------------D 326
           R+F+ MP++D + W+ M+  Y+   D+S                               +
Sbjct: 73  RVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQE 132

Query: 327 AVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMD 386
           +V+LF  M +  V+P++ TF  +L++C+ +E L LG Q+H+L V+ GL  DV   +AL+D
Sbjct: 133 SVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVD 192

Query: 387 VYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVT 446
           +Y KC  +++++  F   P+RN V+W   I G VQ  +  + + +F +M    +  ++ +
Sbjct: 193 MYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPS 252

Query: 447 YSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN 506
           Y+S  R+CA+++ L  G Q+H   +K  +  D VV  A++D+YAK  S+TDAR  F  + 
Sbjct: 253 YASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLP 312

Query: 507 DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS-NGGLLEQGE 565
           +    + NAM+ G    GL  E + +F  M +   R + ++  GV SAC+   G  +  +
Sbjct: 313 NHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQ 372

Query: 566 AYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACII 625
            +  ++ + + ++ C+ +  +++ L G+   L +A  + +G+  + SV  W A++ A   
Sbjct: 373 VHCLAIKSGFDVDICVNN--AVLDLYGKCKALMEAYLIFQGMKQKDSVS-WNAIIAALEQ 429

Query: 626 HNNVEIGRLSAQHILDF--EPED 646
           + + +   L    +L F  +P+D
Sbjct: 430 NGHYDDTILHFNEMLRFGMKPDD 452



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 189/381 (49%), Gaps = 18/381 (4%)

Query: 54  FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
           F+  S +    +C +         +HC  +K G  +D+   N +L++Y K   L +A  +
Sbjct: 349 FDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLI 408

Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
           F  M +++++S+   I     +  + + +  F+ + R G + + F + + LK   ++   
Sbjct: 409 FQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSL 468

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL--------------- 218
           E    V   V K G  S+AFV + ++D +  CG ++ A+K+ D +               
Sbjct: 469 EYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGF 528

Query: 219 -FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
             N   EEA  FFS+M  +G KP++FTFA VL  C  L TI + K  HG  +K     D 
Sbjct: 529 SLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDE 588

Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
           Y++  L+D+Y K G++ ++  +FE++ K+D + W+ MI  YA   L ++A+ +F RM++ 
Sbjct: 589 YISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKE 648

Query: 338 FVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
            V PN  TFV+VL+AC+ +   D G    H +     L   +     ++D+  +    + 
Sbjct: 649 NVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQE 708

Query: 397 SVELFAESP-KRNHVTWNTMI 416
           +V+     P + + V W T++
Sbjct: 709 AVKFINSMPFQADAVIWKTLL 729



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 139/304 (45%), Gaps = 36/304 (11%)

Query: 339 VAPNQFTFVSVLQACATM--EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
           VAP + TF  V Q+CA    E L  G   H+ +V  G +   FVSN L+ +YA+C     
Sbjct: 11  VAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAAC 70

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS----------------------- 433
           +  +F   P+R+ V+WNTM+  Y   G++  A+ +F                        
Sbjct: 71  ARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMF 130

Query: 434 --------KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANAL 485
                   +M    V     T++ +L++C++L  L  G+QVH L VK   ++DV   +AL
Sbjct: 131 QESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSAL 190

Query: 486 IDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNN 545
           +DMY KC S+ DA   F  M + N VSW A I+G   +      L++F  MQ+ G   + 
Sbjct: 191 VDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQ 250

Query: 546 LTFVGVLSACSNGGLLEQGEAYFKSMVAN-YGIEPCIEHYTSMVSLLGRAGHLDKAAKLI 604
            ++     +C+    L  G       + N +  +  +   T++V +  +A  L  A +  
Sbjct: 251 PSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVG--TAIVDVYAKANSLTDARRAF 308

Query: 605 EGIP 608
            G+P
Sbjct: 309 FGLP 312


>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 622

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 225/602 (37%), Positives = 335/602 (55%), Gaps = 47/602 (7%)

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL--YTKSGEISNARRIFEEMPK 305
           +L+ C  ++ +R     HG  LKT   +D   A  LL       SG ++ AR +F+ + +
Sbjct: 24  LLQRCSNMEELR---QIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFR 80

Query: 306 KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
            +   W+ MI  Y+ +    +A+ L+  M    V  N +TF  +L+AC++M  L+   QI
Sbjct: 81  PNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQI 140

Query: 366 HSLVVRVGLLSDVFVSNALMDVYAK-------------------------------CGRM 394
           H+ ++++G  S+++ +N+L++VY+K                               CG +
Sbjct: 141 HAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEI 200

Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
           E + E+F   P+RN ++W +MI G V  G+  +A+ +F +M    +    V   S L+AC
Sbjct: 201 EMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQAC 260

Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
           A L  L+ G  +H    K   ++D ++   LIDMYAKCG + +A  VF  M +     W 
Sbjct: 261 ADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWT 320

Query: 515 AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
           AMISGY++HG   E L+ F  MQ  G  PN +TF G+L+ACS+ GL+ + +  F+SM   
Sbjct: 321 AMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERI 380

Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL 634
           +G +P IEHY  MV LLGRAG L +A +LIE +P +P+  IW ALL AC IH N+E+G+ 
Sbjct: 381 HGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQ 440

Query: 635 SAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVH 683
             + ++  +P     ++ L++I+A A  W +AA           SK PG S I   G  H
Sbjct: 441 IGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAH 500

Query: 684 YFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLAL 743
            F AGD SH  +  I  MLE +  + R+ GY P L  +L D+ + EKE  +  HSEKLA+
Sbjct: 501 EFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEKETAIHHHSEKLAV 560

Query: 744 AFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGD 803
            F L    P   IRI+KNLR+C DCHT IK+ISK+  REI++RD  RFH F+DG C+CGD
Sbjct: 561 TFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDRTRFHLFKDGNCTCGD 620

Query: 804 FW 805
           +W
Sbjct: 621 YW 622



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 167/368 (45%), Gaps = 49/368 (13%)

Query: 206 GCVEFARKVFDGLFN-DCF---------------EEALNFFSQMRAVGFKPNNFTFAFVL 249
           G + +AR VFD +F  + F               EEAL  +  M       N +TF F+L
Sbjct: 66  GSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLL 125

Query: 250 KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR------------ 297
           KAC  +  +   +  H   +K  +  ++Y   +LL++Y+KSG+I +AR            
Sbjct: 126 KACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTV 185

Query: 298 -------------------RIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
                               IF  MP++++I W+ MI+         +A+ LF RM+ A 
Sbjct: 186 SWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAG 245

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           +  +    VS LQACA +  LD G  IH+ + +  +  D  +   L+D+YAKCG +E ++
Sbjct: 246 IKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAI 305

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
           E+F +  ++    W  MI GY   G   +A+  F KM    V   ++T++ +L AC+   
Sbjct: 306 EVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAG 365

Query: 459 AL-EPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAM 516
            + E  +    +     +   +     ++D+  + G + +A  L+ +M    N   W A+
Sbjct: 366 LVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGAL 425

Query: 517 ISGYSMHG 524
           ++   +HG
Sbjct: 426 LNACHIHG 433



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 118/443 (26%), Positives = 189/443 (42%), Gaps = 60/443 (13%)

Query: 45  TPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKL 104
           TP +   SE N+      LQ C   ++L+    IH Q+LK G  LD    + LL      
Sbjct: 7   TPTSQLSSESNAAQTLHLLQRCSNMEELRQ---IHGQMLKTGLILDEIPASKLLAFCASP 63

Query: 105 NR--LPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTA 162
           N   L  A  +FD +   NT  + T I+GY+ S +  EA+ L+  +       N + F  
Sbjct: 64  NSGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPF 123

Query: 163 FLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTAL------------------------ 198
            LK   SM   E    + A + K+G  S  +   +L                        
Sbjct: 124 LLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRD 183

Query: 199 -------IDAFSVCGCVEFARKVFD-----------GLFNDCF-----EEALNFFSQMRA 235
                  ID ++ CG +E A ++F+            + + C      +EALN F +M+ 
Sbjct: 184 TVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQT 243

Query: 236 VGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISN 295
            G K +N      L+AC  L  +   K  H    K   E+D  +   L+D+Y K G++  
Sbjct: 244 AGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEE 303

Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACAT 355
           A  +F +M +K V  W+ MI+ YA      +A+E F +M+ A V PNQ TF  +L AC+ 
Sbjct: 304 AIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSH 363

Query: 356 MEGLDLGNQIHSLVVRV-GLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWN 413
              +     +   + R+ G    +     ++D+  + G ++ + EL    P K N   W 
Sbjct: 364 AGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWG 423

Query: 414 TM-----IVGYVQLG-EVGKAMI 430
            +     I G ++LG ++GK +I
Sbjct: 424 ALLNACHIHGNLELGKQIGKILI 446


>gi|449434268|ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Cucumis sativus]
 gi|449533166|ref|XP_004173548.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Cucumis sativus]
          Length = 712

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 211/591 (35%), Positives = 325/591 (54%), Gaps = 20/591 (3%)

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           A N F +M     + N  ++  ++   L    + VA+    C  +     D+    +++ 
Sbjct: 131 ACNMFDKMS----ERNVVSWTTIINGLLEFGRVEVAE----CLFRVMPTKDVTAWNSMVH 182

Query: 286 LYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFT 345
            +  +G + +A  +FE+MP ++VI W+ +I        S +A+ +F +M  +F A +  T
Sbjct: 183 GFFSNGRVEDAIELFEKMPNRNVISWTSVIGGLDHNGRSFEALVVFHKMLASFKATSS-T 241

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
               L ACA +    +G QIH L+V+ G   + ++S +L+  YA C  ++N+  +F ++ 
Sbjct: 242 LACALTACANICTPFIGVQIHGLIVKTGYCFNEYISASLISFYANCKLIDNASSIFNDNV 301

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
            RN V W  ++ GY        A+ +F  M+   V   + + +S L +C  L A++ G +
Sbjct: 302 SRNVVVWTALLTGYGLNCRHTDALQVFKGMMRMSVLPNQSSLTSALNSCCGLEAVDRGRE 361

Query: 466 VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGL 525
           VH +  K   + D+ V+N+L+ MY KCG I D   VF  M+  N VSWN++I G + HG 
Sbjct: 362 VHAVAHKLGLESDIFVSNSLVVMYTKCGHINDGIAVFTRMSRKNVVSWNSIIVGCAQHGF 421

Query: 526 SAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYT 585
               L +F  M +    P+ +T  G+LSAC + G+L +G  +FK    N+GIE   EHY+
Sbjct: 422 GRWALTLFAQMIRTRVDPDEITLAGLLSACGHSGMLTKGRCFFKHFGKNFGIEMTNEHYS 481

Query: 586 SMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPE 645
           SMV LLGR G L++A  LI  +P + + M+W ALL + I H+NV +   +A+ +LD +P 
Sbjct: 482 SMVDLLGRYGQLEEAEALIHIMPGKANYMVWLALLSSSINHSNVHVAERAAKCVLDLQPN 541

Query: 646 DEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHAD 694
             A + LLSN+YA    W + +            K+PG SWI  +G+ H F +GD SH  
Sbjct: 542 CSAAYTLLSNLYASTGKWTEVSKIRKKMKDEGILKQPGSSWITIKGIKHNFISGDQSHPL 601

Query: 695 MNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSS 754
              I   LEWL  K ++ GY+PD      DV  ++KE  L  HSE+LA+ F L      S
Sbjct: 602 SRKIYQKLEWLGGKLKELGYVPDPKFSFHDVETEQKEEMLSYHSERLAIGFGLISTVEGS 661

Query: 755 PIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            I ++KNLRIC DCH A+K+ SK+V REI++RD  RFHHF +G CSCGD+W
Sbjct: 662 TIIVMKNLRICGDCHNAVKLTSKVVGREIVVRDPSRFHHFHNGTCSCGDYW 712



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 217/449 (48%), Gaps = 33/449 (7%)

Query: 96  VLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHEL 155
           +++  Y    RL DA KLF EMP ++ IS+ + ++G         A  +F  +     E 
Sbjct: 86  MMIGGYADEGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLTMACNMFDKM----SER 141

Query: 156 NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF 215
           N  ++T  +  L+  G  E+  C+F  +     D  A+   +++  F   G VE A ++F
Sbjct: 142 NVVSWTTIINGLLEFGRVEVAECLFRVMPT--KDVTAW--NSMVHGFFSNGRVEDAIELF 197

Query: 216 DGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIR 259
           + +                 N    EAL  F +M A  FK  + T A  L AC  + T  
Sbjct: 198 EKMPNRNVISWTSVIGGLDHNGRSFEALVVFHKMLA-SFKATSSTLACALTACANICTPF 256

Query: 260 VAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYA 319
           +    HG  +KT Y  + Y++ +L+  Y     I NA  IF +   ++V+ W+ ++  Y 
Sbjct: 257 IGVQIHGLIVKTGYCFNEYISASLISFYANCKLIDNASSIFNDNVSRNVVVWTALLTGYG 316

Query: 320 QTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVF 379
                 DA+++F  M +  V PNQ +  S L +C  +E +D G ++H++  ++GL SD+F
Sbjct: 317 LNCRHTDALQVFKGMMRMSVLPNQSSLTSALNSCCGLEAVDRGREVHAVAHKLGLESDIF 376

Query: 380 VSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ 439
           VSN+L+ +Y KCG + + + +F    ++N V+WN++IVG  Q G    A+ +F++M+  +
Sbjct: 377 VSNSLVVMYTKCGHINDGIAVFTRMSRKNVVSWNSIIVGCAQHGFGRWALTLFAQMIRTR 436

Query: 440 VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN----ALIDMYAKCGSI 495
           V   E+T + +L AC     L  G    C       +  + + N    +++D+  + G +
Sbjct: 437 VDPDEITLAGLLSACGHSGMLTKG---RCFFKHFGKNFGIEMTNEHYSSMVDLLGRYGQL 493

Query: 496 TDAR-LVFDMMNDWNEVSWNAMISGYSMH 523
            +A  L+  M    N + W A++S    H
Sbjct: 494 EEAEALIHIMPGKANYMVWLALLSSSINH 522



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 106/394 (26%), Positives = 182/394 (46%), Gaps = 33/394 (8%)

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR------- 335
           LL  + ++G I  AR +F +M    V  ++ MI  YA      DA++LF  M        
Sbjct: 56  LLSFHLRNGRIDEARSLFNKMSSPGVNLYTMMIGGYADEGRLEDALKLFYEMPVKDLISW 115

Query: 336 -----------QAFVAPNQFTFVS---VLQACATMEG-LDLGN-QIHSLVVRVGLLSDVF 379
                         +A N F  +S   V+     + G L+ G  ++   + RV    DV 
Sbjct: 116 NSMLKGCLKCGDLTMACNMFDKMSERNVVSWTTIINGLLEFGRVEVAECLFRVMPTKDVT 175

Query: 380 VSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ 439
             N+++  +   GR+E+++ELF + P RN ++W ++I G    G   +A+++F KML   
Sbjct: 176 AWNSMVHGFFSNGRVEDAIELFEKMPNRNVISWTSVIGGLDHNGRSFEALVVFHKML-AS 234

Query: 440 VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR 499
             AT  T +  L ACA++     G+Q+H L VK  Y  +  ++ +LI  YA C  I +A 
Sbjct: 235 FKATSSTLACALTACANICTPFIGVQIHGLIVKTGYCFNEYISASLISFYANCKLIDNAS 294

Query: 500 LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGG 559
            +F+     N V W A+++GY ++    + L+VF  M +    PN  +    L++C    
Sbjct: 295 SIFNDNVSRNVVVWTALLTGYGLNCRHTDALQVFKGMMRMSVLPNQSSLTSALNSCCGLE 354

Query: 560 LLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRAL 619
            +++G     ++    G+E  I    S+V +  + GH++    +   +  + +V+ W ++
Sbjct: 355 AVDRGRE-VHAVAHKLGLESDIFVSNSLVVMYTKCGHINDGIAVFTRMS-RKNVVSWNSI 412

Query: 620 LGACIIHNNVEIGR----LSAQHILDFEPEDEAT 649
           +  C  H     GR    L AQ I      DE T
Sbjct: 413 IVGCAQHG---FGRWALTLFAQMIRTRVDPDEIT 443



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/349 (24%), Positives = 157/349 (44%), Gaps = 35/349 (10%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D+ A N +++ +    R+ DA +LF++MP RN IS+ + I G   + +  EA+ +F  + 
Sbjct: 173 DVTAWNSMVHGFFSNGRVEDAIELFEKMPNRNVISWTSVIGGLDHNGRSFEALVVFHKM- 231

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPC-----VFACVYKLGHDSNAFVGTALIDAFSV 204
                L  F  T+          A +C       +   + K G+  N ++  +LI  ++ 
Sbjct: 232 -----LASFKATSSTLACALTACANICTPFIGVQIHGLIVKTGYCFNEYISASLISFYAN 286

Query: 205 CGCVEFARKVFD---------------GLFNDC-FEEALNFFSQMRAVGFKPNNFTFAFV 248
           C  ++ A  +F+               G   +C   +AL  F  M  +   PN  +    
Sbjct: 287 CKLIDNASSIFNDNVSRNVVVWTALLTGYGLNCRHTDALQVFKGMMRMSVLPNQSSLTSA 346

Query: 249 LKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDV 308
           L +C GL+ +   +  H  A K   E D++V+ +L+ +YTK G I++   +F  M +K+V
Sbjct: 347 LNSCCGLEAVDRGREVHAVAHKLGLESDIFVSNSLVVMYTKCGHINDGIAVFTRMSRKNV 406

Query: 309 IPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSL 368
           + W+ +I   AQ      A+ LF +M +  V P++ T   +L AC     L  G      
Sbjct: 407 VSWNSIIVGCAQHGFGRWALTLFAQMIRTRVDPDEITLAGLLSACGHSGMLTKG---RCF 463

Query: 369 VVRVGLLSDVFVSN----ALMDVYAKCGRMENSVELFAESP-KRNHVTW 412
               G    + ++N    +++D+  + G++E +  L    P K N++ W
Sbjct: 464 FKHFGKNFGIEMTNEHYSSMVDLLGRYGQLEEAEALIHIMPGKANYMVW 512


>gi|15241448|ref|NP_199236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170229|sp|Q9FFG8.1|PP417_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g44230
 gi|9759524|dbj|BAB10990.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|91806984|gb|ABE66219.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332007694|gb|AED95077.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 657

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 223/605 (36%), Positives = 332/605 (54%), Gaps = 51/605 (8%)

Query: 249 LKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISN--ARRIFEEMPKK 306
           L  C+ L+ I   K  HG  L+   +   Y+   L+   TK G   +  ARR+ E +  +
Sbjct: 56  LDDCINLNQI---KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFR 112

Query: 307 DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIH 366
           +   W+ +I  YA      +A+ ++  MR+  + P  FTF ++L+AC TM+ L+LG Q H
Sbjct: 113 NPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFH 172

Query: 367 SLVVRVGLLSDVFVSNALMDVYAKC-------------------------------GRME 395
           +   R+     V+V N ++D+Y KC                               G ME
Sbjct: 173 AQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNME 232

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
            + ELF   P ++ V W  M+ G+ Q  +  +A+  F +M +  + A EVT +  + ACA
Sbjct: 233 CAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACA 292

Query: 456 SLAALEPGMQVHCLTVKANYDMD--VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
            L A +   +   +  K+ Y     VV+ +ALIDMY+KCG++ +A  VF  MN+ N  ++
Sbjct: 293 QLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTY 352

Query: 514 NAMISGYSMHGLSAEVLKVFDLM-QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
           ++MI G + HG + E L +F  M  Q   +PN +TFVG L ACS+ GL++QG   F SM 
Sbjct: 353 SSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMY 412

Query: 573 ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIG 632
             +G++P  +HYT MV LLGR G L +A +LI+ +  +P   +W ALLGAC IHNN EI 
Sbjct: 413 QTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIA 472

Query: 633 RLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSW-IENQG 680
            ++A+H+ + EP+    ++LLSN+YA A  W           EK   K P +SW ++  G
Sbjct: 473 EIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNG 532

Query: 681 MVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEK 740
            +H F  G+ +H   N I+  LE L  +    GY PDLS+V  DV ++ K   L  H+EK
Sbjct: 533 QMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEK 592

Query: 741 LALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCS 800
           LALAF+L      S I I+KNLR+C+DCH  +++ S++  + II+RD  RFHHF+ G CS
Sbjct: 593 LALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCS 652

Query: 801 CGDFW 805
           CGDFW
Sbjct: 653 CGDFW 657



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 97/414 (23%), Positives = 184/414 (44%), Gaps = 61/414 (14%)

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
           R+G + + +  T  ++ L  +G   + P     +  +    N F+ TA+I  +++ G   
Sbjct: 74  RKGLDQSCYILTKLIRTLTKLG-VPMDPYARRVIEPVQF-RNPFLWTAVIRGYAIEGK-- 129

Query: 210 FARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCAL 269
                        F+EA+  +  MR     P +FTF+ +LKAC  +  + + +  H    
Sbjct: 130 -------------FDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTF 176

Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARY----------- 318
           +      +YV   ++D+Y K   I  AR++F+EMP++DVI W+ +IA Y           
Sbjct: 177 RLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAE 236

Query: 319 --------------------AQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
                               AQ     +A+E F RM ++ +  ++ T    + ACA +  
Sbjct: 237 LFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGA 296

Query: 359 LDLGNQIHSLVVRVGL-LSD-VFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMI 416
               ++   +  + G   SD V + +AL+D+Y+KCG +E +V +F     +N  T+++MI
Sbjct: 297 SKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMI 356

Query: 417 VGYVQLGEVGKAMIMFSKML-EEQVPATEVTYSSVLRACASLAALEPGMQV-----HCLT 470
           +G    G   +A+ +F  M+ + ++    VT+   L AC+    ++ G QV         
Sbjct: 357 LGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFG 416

Query: 471 VKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
           V+   D        ++D+  + G + +A  L+  M  + +   W A++    +H
Sbjct: 417 VQPTRDH----YTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIH 466



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 173/417 (41%), Gaps = 60/417 (14%)

Query: 40  SNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLN 99
           +NS T     +  E    S  + L  CI   +L     IH  VL+KG     +    L+ 
Sbjct: 33  NNSGTFSEISNQKELLVSSLISKLDDCI---NLNQIKQIHGHVLRKGLDQSCYILTKLIR 89

Query: 100 VYVKLNRL--PDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNP 157
              KL     P A ++ + +  RN   +   I+GY +  +F EA+ ++  + +E  E+ P
Sbjct: 90  TLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKE--EITP 147

Query: 158 --FAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF 215
             F F+A LK   +M    L     A  ++L      +VG  +ID +  C  ++ ARKVF
Sbjct: 148 VSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVF 207

Query: 216 DGLFN-----------------------DCFE------------------------EALN 228
           D +                         + FE                        EAL 
Sbjct: 208 DEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALE 267

Query: 229 FFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV--ALLDL 286
           +F +M   G + +  T A  + AC  L   + A  A   A K+ Y    +V +  AL+D+
Sbjct: 268 YFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDM 327

Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM-RQAFVAPNQFT 345
           Y+K G +  A  +F  M  K+V  +S MI   A    + +A+ LF  M  Q  + PN  T
Sbjct: 328 YSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVT 387

Query: 346 FVSVLQACATMEGLDLGNQI-HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           FV  L AC+    +D G Q+  S+    G+         ++D+  + GR++ ++EL 
Sbjct: 388 FVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELI 444


>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 819

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 226/687 (32%), Positives = 365/687 (53%), Gaps = 27/687 (3%)

Query: 60  ATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPE 119
           A+ L++C Q+  +     +H   +K     +++    L+N+Y KL  + +A  +F  +P 
Sbjct: 124 ASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFHALPV 183

Query: 120 RNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCV 179
           R  +++ T I GY        A+ LF  +  EG   + F   + +    ++G+ E    +
Sbjct: 184 RTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQI 243

Query: 180 FACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------GLFNDCFE 224
               Y+   +++  V   LID +  C  +  ARK+FD               G   + F 
Sbjct: 244 HGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSFN 303

Query: 225 -EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
            EA+  F  M   G++P+ F    +L +C  L  I   +  H   +K   E D YV  AL
Sbjct: 304 AEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNAL 363

Query: 284 LDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ 343
           +D+Y K   ++ AR +F+ + + D I ++ MI  Y++     +AV +F RMR   + P+ 
Sbjct: 364 IDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSL 423

Query: 344 FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
            TFVS+L   ++   ++L  QIH L+++ G   D++ ++AL+DVY+KC  + ++  +F  
Sbjct: 424 LTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNM 483

Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPG 463
              ++ V WN+MI G+ Q  +  +A+ +F+++L   +   E T+ +++   ++LA++  G
Sbjct: 484 LHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHG 543

Query: 464 MQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMH 523
            Q H   +KA  D D  V+NALIDMYAKCG I + R++F+     + + WN+MI+ Y+ H
Sbjct: 544 QQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMITTYAQH 603

Query: 524 GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEH 583
           G + E L+VF LM +    PN +TFVGVLSAC++ G + +G  +F SM +NY IEP IEH
Sbjct: 604 GHAEEALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGLNHFNSMKSNYDIEPGIEH 663

Query: 584 YTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFE 643
           Y S+V+L GR+G L  A + IE +P +P+  +WR+LL AC +  N EIGR +A+  L  +
Sbjct: 664 YASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSACHLFGNAEIGRYAAEMALLAD 723

Query: 644 PEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSH 692
           P D   +VLLSNIYA    W                KE G SWIE    VH F      H
Sbjct: 724 PTDSGPYVLLSNIYASKGLWADVHNLRQQMDSSGTVKETGCSWIEVTKEVHTFIVRGREH 783

Query: 693 ADMNIIRGMLEWLNMKSRKAGYIPDLS 719
            +  +I  +L+ L    +  GY+PD S
Sbjct: 784 PEAELIYSVLDELTSLIKNLGYVPDTS 810



 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 171/570 (30%), Positives = 292/570 (51%), Gaps = 19/570 (3%)

Query: 78  IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
           IH +    G   DLF TN+LL  Y  L RL DA  LFD MP RN +S+ + I  YT   +
Sbjct: 40  IHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGR 99

Query: 138 FVEAVGLFSTLHREGHEL-NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGT 196
              A+ LF    +   E+ N F   + L+         L   V     KL  D+N +VGT
Sbjct: 100 DDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGT 159

Query: 197 ALIDAFSVCGCVEFARKVFDGL-------FN---------DCFEEALNFFSQMRAVGFKP 240
           ALI+ ++  GC++ A  VF  L       +N          C   AL  F +M   G +P
Sbjct: 160 ALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRP 219

Query: 241 NNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIF 300
           + F  A  + AC  L  +   +  HG A ++  E D  V   L+DLY K   +S AR++F
Sbjct: 220 DRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLF 279

Query: 301 EEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLD 360
           + M  ++++ W+ MI+ Y Q   + +A+ +F  M QA   P+ F   S+L +C ++  + 
Sbjct: 280 DCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIW 339

Query: 361 LGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYV 420
            G QIH+ V++  L +D +V NAL+D+YAKC  +  +  +F    + + +++N MI GY 
Sbjct: 340 QGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYS 399

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV 480
           +  ++ +A+ +F +M    +  + +T+ S+L   +S  A+E   Q+H L +K+   +D+ 
Sbjct: 400 KNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLY 459

Query: 481 VANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG 540
            A+ALID+Y+KC  + DA+ VF+M++  + V WN+MI G++ +    E +K+F+ +   G
Sbjct: 460 AASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSG 519

Query: 541 WRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKA 600
             PN  TFV +++  S    +  G+  F + +   G++       +++ +  + G + + 
Sbjct: 520 MAPNEFTFVALVTVASTLASMFHGQQ-FHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEG 578

Query: 601 AKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
             L E    +  V+ W +++     H + E
Sbjct: 579 RMLFESTCGE-DVICWNSMITTYAQHGHAE 607



 Score =  223 bits (567), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 137/404 (33%), Positives = 207/404 (51%), Gaps = 23/404 (5%)

Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL--------------- 218
            L P + A     G   + F+   L+  +S  G +  AR +FD +               
Sbjct: 35  RLNPAIHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMY 94

Query: 219 ----FNDCFEEALNFFSQMRAVGFK-PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY 273
                +DC   A++ F   +    + PN F  A VL+AC     + + +  HG A+K   
Sbjct: 95  TQHGRDDC---AISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDL 151

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
           + ++YV  AL++LY K G +  A  +F  +P +  + W+ +I  YAQ      A+ELF R
Sbjct: 152 DANVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDR 211

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           M    V P++F   S + AC+ +  L+ G QIH    R    +D  V N L+D+Y KC R
Sbjct: 212 MGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSR 271

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           +  + +LF     RN V+W TMI GY+Q     +A+ MF  M +          +S+L +
Sbjct: 272 LSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNS 331

Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
           C SLAA+  G Q+H   +KA+ + D  V NALIDMYAKC  +T+AR VFD + + + +S+
Sbjct: 332 CGSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISY 391

Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSN 557
           NAMI GYS +   AE + +F  M+    RP+ LTFV +L   S+
Sbjct: 392 NAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSS 435


>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 959

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 229/689 (33%), Positives = 367/689 (53%), Gaps = 27/689 (3%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           + +++   +++C   +++     +H      G  +DLF  + L+ +Y     + DA  LF
Sbjct: 176 DKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLF 235

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           DE+P R+ I +   + GY  +  F  A+G F  +     + N  +F   L V  + G   
Sbjct: 236 DELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVR 295

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-----------GLF---- 219
               +   V + G +S+  V   +I  +S CG +  ARK+FD           GL     
Sbjct: 296 AGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYV 355

Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
            N   +EA+  F  M   G K ++ TFA  L + L   +++  K  H   ++     D+Y
Sbjct: 356 QNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVY 415

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           +  AL+D+Y K G++  A + F++    DV   + MI+ Y    L+++A+ LF  + Q  
Sbjct: 416 LKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEG 475

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           + PN  T  SVL ACA +  L LG ++H  +++ GL +   V +++  +YAK GR++ + 
Sbjct: 476 MVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAY 535

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
           + F   P ++ V WN MIV + Q G+   A+ +F +M         V+ S+ L ACA+  
Sbjct: 536 QFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYP 595

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           AL  G ++HC  V+ ++  D  VA+ LIDMY+KCG +  AR VFDMM+  NEVSWN++I+
Sbjct: 596 ALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIA 655

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
            Y  HG   E L +F  M + G +P+++TF+ ++SAC + GL+++G  YF+ M   YGI 
Sbjct: 656 AYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGIC 715

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
             +EH+  MV L GRAG L +A   I+ +PF P    W +LLGAC +H NVE+ +L+++H
Sbjct: 716 ARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVELAKLASKH 775

Query: 639 ILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRA 687
           +++ +P +   +VLLSN++A A  W           EK   K PG SWI+  G  H F A
Sbjct: 776 LVELDPNNSGYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMFSA 835

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIP 716
            D  H     I  +L+ L ++ RK GY+P
Sbjct: 836 ADGCHPQSVEIYLILKNLLLELRKHGYVP 864



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 131/392 (33%), Positives = 213/392 (54%), Gaps = 1/392 (0%)

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
           CF+ AL FF +M      P+ +TF +V+KAC GL+ + + K  H  A    + MDL++  
Sbjct: 157 CFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGS 216

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
           +L+ LYT +G I +A+ +F+E+P +D I W+ M+  Y +      A+  F  MR + V P
Sbjct: 217 SLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKP 276

Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
           N  +FV +L  CAT   +  G Q+H LV+R G  SD  V+N ++ +Y+KCG + ++ ++F
Sbjct: 277 NSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIF 336

Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
              P+ + VTWN +I GYVQ G   +A+ +F  M+   V    +T++S L +     +L+
Sbjct: 337 DIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLK 396

Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
              +VH   V+     DV + +AL+D+Y K G +  A   F      +     AMISGY 
Sbjct: 397 YCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYV 456

Query: 522 MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
           ++GL+ E L +F  + Q G  PN LT   VL AC+    L+ G+     ++   G+E   
Sbjct: 457 LNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKK-GLENVC 515

Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSV 613
           +  +S+  +  ++G LD A +    +P + SV
Sbjct: 516 QVGSSITYMYAKSGRLDLAYQFFRRMPVKDSV 547



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 153/566 (27%), Positives = 269/566 (47%), Gaps = 18/566 (3%)

Query: 73  QTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGY 132
           Q    IH +VL  G    L   + +L +YV      D   LF  +    ++ +   I+G+
Sbjct: 93  QQVRQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGF 152

Query: 133 TVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNA 192
           ++   F  A+  F  +       + + F   +K    +    LC  V      +G   + 
Sbjct: 153 SMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDL 212

Query: 193 FVGTALIDAFSVCGCVEFARKVFDGL-FNDC---------------FEEALNFFSQMRAV 236
           F+G++LI  ++  G +  A+ +FD L   DC               F  AL  F +MR  
Sbjct: 213 FIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNS 272

Query: 237 GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNA 296
             KPN+ +F  +L  C     +R     HG  +++ +E D  VA  ++ +Y+K G + +A
Sbjct: 273 CVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDA 332

Query: 297 RRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM 356
           R+IF+ MP+ D + W+ +IA Y Q   + +AV LF  M  + V  +  TF S L +    
Sbjct: 333 RKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKS 392

Query: 357 EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMI 416
             L    ++HS +VR G+  DV++ +AL+D+Y K G +E + + F ++   +      MI
Sbjct: 393 GSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMI 452

Query: 417 VGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD 476
            GYV  G   +A+ +F  +++E +    +T +SVL ACA+LA+L+ G ++HC  +K   +
Sbjct: 453 SGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLE 512

Query: 477 MDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLM 536
               V +++  MYAK G +  A   F  M   + V WN MI  +S +G     + +F  M
Sbjct: 513 NVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQM 572

Query: 537 QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGH 596
              G + ++++    LSAC+N   L  G+     +V N  I       ++++ +  + G 
Sbjct: 573 GTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVA-STLIDMYSKCGK 631

Query: 597 LDKAAKLIEGIPFQPSVMIWRALLGA 622
           L  A  + + + ++  V  W +++ A
Sbjct: 632 LALARSVFDMMDWKNEVS-WNSIIAA 656



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/435 (22%), Positives = 192/435 (44%), Gaps = 19/435 (4%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           + +S ++A+ L S +++  L+    +H  +++ G   D++  + L+++Y K   +  A K
Sbjct: 376 KLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACK 435

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
            F +    +       I GY ++   VEA+ LF  L +EG   N     + L    ++  
Sbjct: 436 TFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALAS 495

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------------- 218
            +L   +   + K G ++   VG+++   ++  G ++ A + F  +              
Sbjct: 496 LKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVS 555

Query: 219 --FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
              N   E A++ F QM   G K ++ + +  L AC     +   K  H   ++  +  D
Sbjct: 556 FSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISD 615

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
            +VA  L+D+Y+K G+++ AR +F+ M  K+ + W+ +IA Y       + ++LF  M +
Sbjct: 616 TFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVE 675

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
           A + P+  TF+ ++ AC     +D G      +    G+ + +     ++D+Y + GR+ 
Sbjct: 676 AGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICARMEHFACMVDLYGRAGRLH 735

Query: 396 NSVELFAESP-KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
            + +     P   +  TW +++      G V  A +  SK L E  P     Y  +    
Sbjct: 736 EAFDTIKSMPFTPDAGTWGSLLGACRLHGNVELAKLA-SKHLVELDPNNSGYYVLLSNVH 794

Query: 455 ASLAALEPGMQVHCL 469
           A     E  ++V  L
Sbjct: 795 AGAGEWESVLKVRSL 809



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 2/261 (0%)

Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
           QIH+ V+  G+   + + + ++ +Y  C   ++   LF        + WN +I G+  LG
Sbjct: 97  QIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSMLG 156

Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN 483
               A++ F +ML   V   + T+  V++AC  L  +     VH L     + MD+ + +
Sbjct: 157 CFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGS 216

Query: 484 ALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRP 543
           +LI +Y   G I DA+ +FD +   + + WN M++GY  +G     L  F  M+    +P
Sbjct: 217 SLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKP 276

Query: 544 NNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKL 603
           N+++FV +LS C+  G++  G      +V   G E       +++++  + G+L  A K+
Sbjct: 277 NSVSFVCLLSVCATRGIVRAG-IQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKI 335

Query: 604 IEGIPFQPSVMIWRALLGACI 624
            + +P Q   + W  L+   +
Sbjct: 336 FDIMP-QTDTVTWNGLIAGYV 355



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 115/266 (43%), Gaps = 32/266 (12%)

Query: 50  SVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPD 109
           S ++F+S S + +L +C     L     +HC V++     D F  + L+++Y K  +L  
Sbjct: 575 SGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLAL 634

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A  +FD M  +N +S+ + I  Y    +  E + LF  +   G  + P   T FL ++ +
Sbjct: 635 ARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAG--IQPDHVT-FLVIMSA 691

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE-FARKVFDGLFNDCFEEALN 228
            G A L             D   +    + + + +C  +E FA  V      D +  A  
Sbjct: 692 CGHAGLV------------DEGIYYFRCMTEEYGICARMEHFACMV------DLYGRAGR 733

Query: 229 F---FSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA---VA 282
               F  ++++ F P+  T+  +L AC     + +AK A     K   E+D   +   V 
Sbjct: 734 LHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVELAKLAS----KHLVELDPNNSGYYVL 789

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDV 308
           L +++  +GE  +  ++   M +K V
Sbjct: 790 LSNVHAGAGEWESVLKVRSLMKEKGV 815


>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
 gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
           Group]
 gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
          Length = 658

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 223/654 (34%), Positives = 347/654 (53%), Gaps = 28/654 (4%)

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDC 222
           V   + K G  +   V  ALI  ++    +E A  VFD +                 N  
Sbjct: 6   VHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGL 65

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
           +++A+  F +M   G + ++ T   V+ AC+      +    HG +++T    +  +  A
Sbjct: 66  YDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNA 125

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           LLD+Y+   +  +  +IF  M +K+V+ W+ MI  Y +         LF  M    + P+
Sbjct: 126 LLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPD 185

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
            F   S L A A  E L  G  +H   +R G+   + V+NALM++Y KCG ME +  +F 
Sbjct: 186 VFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFD 245

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
              K++ ++WNT+I GY +     +A  +F++ML +  P   VT + +L A ASL++LE 
Sbjct: 246 HVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQLRP-NAVTMACILPAAASLSSLER 304

Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
           G ++H   V+  Y  D  VANAL+DMY KCG++  AR +FDM+ + N +SW  MI+GY M
Sbjct: 305 GREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGM 364

Query: 523 HGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
           HG   + + +F+ M+  G +P+  +F  +L ACS+ GL ++G  +F +M   + IEP ++
Sbjct: 365 HGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKLK 424

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDF 642
           HY  MV LL   G+L +A + IE +P +P   IW +LL  C IH NV++    A+ + + 
Sbjct: 425 HYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMVFEL 484

Query: 643 EPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTS 691
           EPE+   +VLL+NIYA A  WE           +   +  G SWIE +G  H F A + +
Sbjct: 485 EPENTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVRGKAHIFFAENRN 544

Query: 692 HADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMP 751
           H     I   L+ +  + ++ G+ P     L    +   +  L  HS KLA+AF +  + 
Sbjct: 545 HPQGMRIAEFLDDVARRMQEEGHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVLNLS 604

Query: 752 PSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
              PIR+ KN R+C  CH A K ISK+  REII+RD +RFHHF++G CSC  +W
Sbjct: 605 QGRPIRVTKNSRVCSHCHEAAKFISKMCGREIILRDSNRFHHFEEGRCSCRGYW 658



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 129/467 (27%), Positives = 226/467 (48%), Gaps = 19/467 (4%)

Query: 75  AMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTV 134
            + +H  ++K G        N L++ Y K NR+ DA  +FDEMP+R+ IS+ + I G   
Sbjct: 3   GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62

Query: 135 SSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFV 194
           +  + +AV LF  +  EG EL+     + +   V   ++ +   V     + G  S   +
Sbjct: 63  NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSL 122

Query: 195 GTALIDAFSVCGCVEFARKVFDGLFNDC----------------FEEALNFFSQMRAVGF 238
           G AL+D +S C       K+F  +                    F++    F +M   G 
Sbjct: 123 GNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGI 182

Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
           +P+ F     L A  G ++++  KS HG A++   E  L VA AL+++Y K G +  AR 
Sbjct: 183 RPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARF 242

Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
           IF+ + KKD I W+ +I  Y++++L+ +A  LF  M    + PN  T   +L A A++  
Sbjct: 243 IFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLSS 301

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           L+ G ++H+  VR G L D FV+NAL+D+Y KCG +  +  LF     +N ++W  MI G
Sbjct: 302 LERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAG 361

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ-VHCLTVKANYDM 477
           Y   G    A+ +F +M    +     ++S++L AC+     + G +  + +  +   + 
Sbjct: 362 YGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEP 421

Query: 478 DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS-WNAMISGYSMH 523
            +     ++D+    G++ +A    + M    + S W +++ G  +H
Sbjct: 422 KLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIH 468



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 149/318 (46%), Gaps = 17/318 (5%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E +S +  + + +C+Q+        +H   ++ G   +    N LL++Y   +      K
Sbjct: 82  ELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNK 141

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
           +F  M ++N +S+   I  YT +  F +  GLF  +  EG   + FA T+ L        
Sbjct: 142 IFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNES 201

Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------------- 219
            +    V     + G +    V  AL++ +  CG +E AR +FD +              
Sbjct: 202 LKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGG 261

Query: 220 ---NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
              ++   EA   F++M  +  +PN  T A +L A   L ++   +  H  A++  Y  D
Sbjct: 262 YSRSNLANEAFTLFNEM-LLQLRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLED 320

Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
            +VA AL+D+Y K G +  ARR+F+ +  K++I W+ MIA Y       DA+ LF +M+ 
Sbjct: 321 NFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKG 380

Query: 337 AFVAPNQFTFVSVLQACA 354
           + + P+  +F ++L AC+
Sbjct: 381 SGIQPDAGSFSAILYACS 398


>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
          Length = 539

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 214/531 (40%), Positives = 307/531 (57%), Gaps = 52/531 (9%)

Query: 324 SIDAVELFCRM-RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSN 382
           S +++ +F  M R +   PN++TFV V +AC    G+  G QI    +++GL S++FV+N
Sbjct: 12  SHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTN 71

Query: 383 ALMDVYAK-------------------------------CGRMENSVELFAESPKRNHVT 411
           A++ +YA                                 G +  + E+F E  +R+ V+
Sbjct: 72  AMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVS 131

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
           W T+I GYVQ+G   +A+ +F +ML+   P  E T +S L ACA+L AL+ G  +H    
Sbjct: 132 WTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYID 191

Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFD-----MMNDWNEVSWNAMISGYSMHGLS 526
           K+   M+  +  +L+DMYAKCG I  A  VF       +  W    WNAMI GY+MHG S
Sbjct: 192 KSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVW---PWNAMIGGYAMHGKS 248

Query: 527 AEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTS 586
            E + +F+ M+     PN +TFV +L+ACS+G L+E+G  YFKSM ++YGIEP IEHY  
Sbjct: 249 KEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGC 308

Query: 587 MVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPED 646
           MV LLGR+G L +A + +  +P  P   IW ALLGAC IH ++E G+   + I + + + 
Sbjct: 309 MVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDH 368

Query: 647 EATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADM 695
              HVLL+N+Y+ +  W++A +           K PG S IE  G+ H F  GD SH   
Sbjct: 369 IGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQT 428

Query: 696 NIIRGMLEWLNMKSRKAGYIPDLSAVLRDV-REDEKERYLWVHSEKLALAFALFKMPPSS 754
             +   L+ +  K + AGY+P+   VL D+  E++KE  L  HSEKLA+AF L   PP +
Sbjct: 429 KQLYLFLDEMTTKLKNAGYVPEFGEVLLDIDDEEDKETALSKHSEKLAIAFGLINTPPGT 488

Query: 755 PIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            IRI+KNLR+C DCH A K ISK+ +REII+RD  R+HHF+DG CSC D+W
Sbjct: 489 AIRIVKNLRVCADCHEATKFISKVYKREIIVRDRIRYHHFKDGFCSCKDYW 539



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 168/337 (49%), Gaps = 49/337 (14%)

Query: 229 FFSQMRAVGFKPNNFTFAFVLKAC---LGL---DTIRVAKSAHGCALKTCYEMDLYVAVA 282
           F S +R  GF PN +TF FV KAC   LG+   + IRV       A+K   E +L+V  A
Sbjct: 19  FLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVH------AIKIGLESNLFVTNA 72

Query: 283 LLDLYTK-------------------------------SGEISNARRIFEEMPKKDVIPW 311
           ++ +Y                                 SGEI  A+ +F+EM ++DV+ W
Sbjct: 73  MIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSW 132

Query: 312 SFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR 371
           + +IA Y Q     +A++LF  M Q    PN+FT  S L ACA +  LD G  IH  + +
Sbjct: 133 TTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDK 192

Query: 372 VGLLSDVFVSNALMDVYAKCGRMENSVELFAE--SPKRNHVTWNTMIVGYVQLGEVGKAM 429
             +  +  +  +L+D+YAKCG ++ + ++F +    K     WN MI GY   G+  +A+
Sbjct: 193 SEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAI 252

Query: 430 IMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALID 487
            +F +M  E+V   +VT+ ++L AC+    +E G + +  ++ ++Y ++  + +   ++D
Sbjct: 253 DLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEG-RGYFKSMASSYGIEPEIEHYGCMVD 311

Query: 488 MYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
           +  + G + +A   VF+M    +   W A++    +H
Sbjct: 312 LLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIH 348



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 128/283 (45%), Gaps = 51/283 (18%)

Query: 185 KLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------------------G 217
           K+G +SN FV  A+I  ++  G V+ AR+VFD                            
Sbjct: 60  KIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKE 119

Query: 218 LFND--------------------CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDT 257
           +F++                    CF+EAL+ F +M   G  PN FT A  L AC  L  
Sbjct: 120 MFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVA 179

Query: 258 IRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIF--EEMPKKDVIPWSFMI 315
           +   +  H    K+  +M+  +  +LLD+Y K GEI  A ++F  E   K  V PW+ MI
Sbjct: 180 LDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMI 239

Query: 316 ARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGL 374
             YA    S +A++LF +M+   V+PN+ TFV++L AC+  + ++ G     S+    G+
Sbjct: 240 GGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGI 299

Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT-WNTMI 416
             ++     ++D+  + G ++ + E     P     T W  ++
Sbjct: 300 EPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALL 342



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 108/248 (43%), Gaps = 22/248 (8%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           DL++ N+++  YV    +  A ++FDEM ER+ +S+ T I GY     F EA+ LF  + 
Sbjct: 97  DLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEML 156

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
           + G   N F   + L    ++   +    +   + K     N  +  +L+D ++ CG ++
Sbjct: 157 QTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEID 216

Query: 210 FARKVFDGLF------------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKA 251
           FA KVF   +                  +   +EA++ F QM+     PN  TF  +L A
Sbjct: 217 FAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNA 276

Query: 252 CLGLDTIRVAKSAHGCALKTCY--EMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDV 308
           C     +   +  +  ++ + Y  E ++     ++DL  +SG +  A      MP   D 
Sbjct: 277 CSHGKLVEEGR-GYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDA 335

Query: 309 IPWSFMIA 316
             W  ++ 
Sbjct: 336 TIWGALLG 343


>gi|224080790|ref|XP_002306231.1| predicted protein [Populus trichocarpa]
 gi|222849195|gb|EEE86742.1| predicted protein [Populus trichocarpa]
          Length = 480

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 193/484 (39%), Positives = 302/484 (62%), Gaps = 16/484 (3%)

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           M +  + PN FT+ ++L A   +   ++    H+  ++   +    V  AL+D Y K G 
Sbjct: 1   MSREGIKPNDFTYSTILTAQPGVSPFEM----HAQAIKRNYVKSPSVGTALLDAYVKRGN 56

Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
           ++ + ++F    +++ V W+ MI GY Q+G+   A+ +F +M +E++   E T+S ++ A
Sbjct: 57  VDEASKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGIINA 116

Query: 454 CAS-LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS 512
           CA+  A +E G Q+H  ++K+ ++  + V++AL+ MY+K G I  A  VF    + + VS
Sbjct: 117 CAAPTAGVEQGKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVFKRQRERDLVS 176

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
           WN++ISGY+ HG   + L+VF+ MQ++    + +TF+GV+SAC++ GL  +G+ YF  MV
Sbjct: 177 WNSIISGYAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLANEGQRYFDIMV 236

Query: 573 ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIG 632
            ++ IEP +EHY+ MV L GRAG L KA ++I  +PF  S  +WR LL A  IH N+E+G
Sbjct: 237 KDHHIEPRMEHYSCMVDLYGRAGMLVKAMEIINEMPFPASANVWRTLLAASCIHRNLEVG 296

Query: 633 RLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGM 681
           +L+A  ++  +P++ A++VLL+N+YA   +W           EK   K  G SWIE +  
Sbjct: 297 KLAADKLISLQPQNPASYVLLTNMYASVGNWKERAKVRKLMEEKKVKKVAGYSWIEVKNK 356

Query: 682 VHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKL 741
            + F AGD SH   N I   LE L+ + + AGY PD S V +DV E+ KE  L  HSE+L
Sbjct: 357 TYTFLAGDVSHPLSNQIYAKLEELSCQLKGAGYQPDTSYVFQDVDEEHKEAILSQHSERL 416

Query: 742 ALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSC 801
           A+AF L   PP +P++I+KNLR+C DCH+ IK+IS +  R+I++RD +RFHHF+ G CSC
Sbjct: 417 AIAFGLIGTPPGTPLQIVKNLRVCGDCHSVIKLISILEGRDIVVRDSNRFHHFKGGLCSC 476

Query: 802 GDFW 805
           GD+W
Sbjct: 477 GDYW 480



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 150/275 (54%), Gaps = 6/275 (2%)

Query: 233 MRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
           M   G KPN+FT++ +L A  G+    +    H  A+K  Y     V  ALLD Y K G 
Sbjct: 1   MSREGIKPNDFTYSTILTAQPGVSPFEM----HAQAIKRNYVKSPSVGTALLDAYVKRGN 56

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           +  A ++F+ + +KD++ WS MI  YAQ   +  AV +F +M +  + PN++TF  ++ A
Sbjct: 57  VDEASKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGIINA 116

Query: 353 CAT-MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
           CA    G++ G Q+H+  ++    + + VS+AL+ +Y+K G +E++ E+F    +R+ V+
Sbjct: 117 CAAPTAGVEQGKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVFKRQRERDLVS 176

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
           WN++I GY Q G   KA+ +F +M  + +    VT+  V+ AC        G +   + V
Sbjct: 177 WNSIISGYAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLANEGQRYFDIMV 236

Query: 472 KANY-DMDVVVANALIDMYAKCGSITDARLVFDMM 505
           K ++ +  +   + ++D+Y + G +  A  + + M
Sbjct: 237 KDHHIEPRMEHYSCMVDLYGRAGMLVKAMEIINEM 271



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/249 (21%), Positives = 101/249 (40%), Gaps = 18/249 (7%)

Query: 74  TAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYT 133
           +   +H Q +K+           LL+ YVK   + +A+K+F  + E++ +++   I GY 
Sbjct: 24  SPFEMHAQAIKRNYVKSPSVGTALLDAYVKRGNVDEASKVFQRIEEKDIVAWSAMICGYA 83

Query: 134 VSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS-MGWAELCPCVFACVYKLGHDSNA 192
                  AV +F  + +E  + N + F+  +    +     E    + A   K   ++  
Sbjct: 84  QIGDTEGAVRIFVQMAKEKIKPNEYTFSGIINACAAPTAGVEQGKQLHAWSIKSRFNNAL 143

Query: 193 FVGTALIDAFSVCGCVEFARKVF---------------DGLFNDCF-EEALNFFSQMRAV 236
            V +AL+  +S  G +E A +VF                G     +  +AL  F +M+  
Sbjct: 144 CVSSALLTMYSKRGDIESAFEVFKRQRERDLVSWNSIISGYAQHGYGRKALEVFEEMQRQ 203

Query: 237 GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY-EMDLYVAVALLDLYTKSGEISN 295
             + +  TF  V+ AC         +      +K  + E  +     ++DLY ++G +  
Sbjct: 204 NLEMDGVTFIGVISACTHTGLANEGQRYFDIMVKDHHIEPRMEHYSCMVDLYGRAGMLVK 263

Query: 296 ARRIFEEMP 304
           A  I  EMP
Sbjct: 264 AMEIINEMP 272


>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
          Length = 631

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 216/597 (36%), Positives = 327/597 (54%), Gaps = 57/597 (9%)

Query: 265 HGCALKTCYEMDLYVAVALLDLYT--KSGEISNARRIFEEMPKKDVIPWSFMIARYAQTD 322
           H  +LKT      +V+  LL LY+  K  ++  AR IF+ + ++ +I W+ +I  Y +  
Sbjct: 36  HAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYVENQ 95

Query: 323 LSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSN 382
            S D + LF  +   ++ P+ FT   V++ CA +  +  G QIH L +++G  SDVFV  
Sbjct: 96  FSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQG 154

Query: 383 ALMDVYAKCGRME------------------------------------------NSVEL 400
           +L+++Y+KCG ++                                          +++EL
Sbjct: 155 SLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAMINGYMKSGDFDSALEL 214

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           F + P  + VTWN MI GY   G+   A+ MF  ML+     +  T  SVL A + LA L
Sbjct: 215 FYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVL 274

Query: 461 EPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY 520
             G  +H    K  +++D ++  +LI+MYAKCG I  A  VF  +       W A+I G 
Sbjct: 275 GKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGL 334

Query: 521 SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPC 580
            +HG++   L +F  M + G +PN + F+GVL+AC++ GL++ G  YF  M+  Y IEP 
Sbjct: 335 GIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPT 394

Query: 581 IEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHIL 640
           +EHY  +V +L RAGHL++A   IE +P  P+ +IW +LLG    H  ++IG  +AQ ++
Sbjct: 395 LEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVI 454

Query: 641 DFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGD 689
           +  PE    ++LLSN+YA +  WEK +            K+PG S +E++G +H F  GD
Sbjct: 455 EVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTLHEFIVGD 514

Query: 690 TSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVR-EDEKERYLWVHSEKLALAFALF 748
            SH     I   +  +  K +  G++PD + VL  +  E EKE  L  HSE+LA+AF L 
Sbjct: 515 ISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLCIEGEKEKEAELENHSERLAIAFGLI 574

Query: 749 KMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
            + P  PIRI+KNLR+C DCH+  K++SKI  REII+RD  RFHHF++G CSC D+W
Sbjct: 575 NVKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREIIVRDNCRFHHFKNGSCSCMDYW 631



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 154/324 (47%), Gaps = 50/324 (15%)

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYA--KCGRMENSVELFAES 404
           +S+ Q C+  + ++   Q+H+  ++  + +  FVS+ L+ +Y+  K   +  +  +F   
Sbjct: 20  LSLFQTCSAPQEVE---QLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRI 76

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
            +R+ + WNT+I  YV+       +++F +++ E +P    T   V++ CA L  ++ G 
Sbjct: 77  QRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYLP-DNFTLPCVIKGCARLGVVQEGK 135

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND----------------- 507
           Q+H L +K  +  DV V  +L++MY+KCG I  AR VFD M D                 
Sbjct: 136 QIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSW 195

Query: 508 -------------------------WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
                                    W+ V+WN MI+GY ++G   + +K+F +M + G R
Sbjct: 196 NAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSR 255

Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
           P++ T V VLSA S   +L +G  +  S +   G E      TS++ +  + G ++ A  
Sbjct: 256 PSHATLVSVLSAVSGLAVLGKGR-WIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALT 314

Query: 603 LIEGIPFQPSVMIWRALLGACIIH 626
           +   I  +  V  W A++    IH
Sbjct: 315 VFRAIQ-KKKVGHWTAIIVGLGIH 337



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 103/444 (23%), Positives = 179/444 (40%), Gaps = 77/444 (17%)

Query: 50  SVSEFNSHSYATSL-QSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYV--KLNR 106
           S+ ++  H+   SL Q+C    +++    +H   LK       F ++ LL +Y   K+N 
Sbjct: 9   SLQQYLPHNLHLSLFQTCSAPQEVEQ---LHAFSLKTAIFNHPFVSSRLLALYSDPKIND 65

Query: 107 LPDATKLFDEMPERNTISFVTTIQGYTVSSQFV-EAVGLFSTLHREGHELNPFAFT--AF 163
           L  A  +FD +  R+ I + T I+ Y V +QF  + + LF   H   HE  P  FT    
Sbjct: 66  LGYARSIFDRIQRRSLIHWNTIIKCY-VENQFSHDGIVLF---HELVHEYLPDNFTLPCV 121

Query: 164 LKVLVSMGWAELCPCVFACVYKLGHDSNAFVG---------------------------- 195
           +K    +G  +    +     K+G  S+ FV                             
Sbjct: 122 IKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDV 181

Query: 196 --------------TALIDAFSVCGCVEFARKVFDGL----------------FNDCFEE 225
                          A+I+ +   G  + A ++F  +                 N  F +
Sbjct: 182 VLWNSLIDGNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMD 241

Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           A+  F  M  +G +P++ T   VL A  GL  +   +  H    K  +E+D  +  +L++
Sbjct: 242 AVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIE 301

Query: 286 LYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFT 345
           +Y K G I +A  +F  + KK V  W+ +I       ++  A+ LF  M +  + PN   
Sbjct: 302 MYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAII 361

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVS-NALMDVYAKCGRME---NSVELF 401
           F+ VL AC     +D G Q   +++    +         L+D+  + G +E   N++E  
Sbjct: 362 FIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENM 421

Query: 402 AESPKRNHVTWNTMIVGYVQLGEV 425
             SP  N V W +++ G    G++
Sbjct: 422 PISP--NKVIWMSLLGGSRNHGKI 443


>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 682

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 230/635 (36%), Positives = 340/635 (53%), Gaps = 30/635 (4%)

Query: 198 LIDAFSVCGCVEFARKVFDGL-FNDCFEEAL------------NFFSQMRAVGFKPNNFT 244
           LI  ++ CG V  AR VFD + F +     L                 +R V F  N + 
Sbjct: 51  LISFYAKCGRVGLARTVFDAMPFRNAVSANLLMSGYASSGRHKESLQLLRVVDFGMNEYV 110

Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP 304
            +  + A   + +  + +  HG A+K  +    YV  A+L +Y +   + +A ++FE + 
Sbjct: 111 LSAAVSATANVRSYDMGRQCHGYAVKAGFAEQRYVFNAVLYMYCQCAHMEDASKVFESVS 170

Query: 305 KKDVIPWSFMIARY---AQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL 361
             D   ++ MI  Y    Q D S+  V     M       +  ++V+VL  CA+M+   L
Sbjct: 171 GFDAFAFNSMINGYLDRGQLDGSLGIVR---NMTGEAEKWDYVSYVAVLGHCASMKDSVL 227

Query: 362 GNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQ 421
           G Q+H+  ++  L  +V+V +AL+D+Y KC  + ++   F   P++N V+W  ++  Y Q
Sbjct: 228 GAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHDANRAFEVLPEKNVVSWTAVMTAYTQ 287

Query: 422 LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVV 481
                 A+ +F  M  E V   E TY+  L +CA LAAL  G  +    +K  +   ++V
Sbjct: 288 NELYEDALQLFLDMEMEGVQPNEFTYAVALNSCAGLAALRTGNALGACVMKTGHWDHLLV 347

Query: 482 ANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGW 541
           +NAL++MY+K GSI DA  VF  M   + VSWN +I+GY+ HGL+ E ++ F  M     
Sbjct: 348 SNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNLIITGYAHHGLAREGMEAFHSMLSAAV 407

Query: 542 RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAA 601
            P+ +TFVGVLSAC+  GL+++   Y  +M+   GI P  EHYT MV LL R G LD+A 
Sbjct: 408 IPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKEVGITPGKEHYTCMVGLLCRVGRLDEAE 467

Query: 602 KLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMAR 661
           + I        V+ WR+LL +C ++ N  +G   A+ IL  EP D  T+VLLSN+YA A 
Sbjct: 468 RFIVNNCIGTDVVAWRSLLNSCQVYKNYGLGHRVAEQILQLEPSDVGTYVLLSNMYAKAN 527

Query: 662 SW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSR 710
            W           E+A  K PG+SWI     VH F + +  H  M+ I   LE L  + +
Sbjct: 528 RWDGVVKVRKHMRERAVRKSPGVSWIHVGSDVHVFTSEEKVHPQMDQIAKKLEELIDQIK 587

Query: 711 KAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHT 770
             GY+P+ + VL D+ ++ KE +L  HSEKLALAF L   P  + I I+KNLRIC DCH 
Sbjct: 588 AIGYVPNFAVVLHDIDDERKEEHLMYHSEKLALAFGLIHTPKGATIHIMKNLRICDDCHV 647

Query: 771 AIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           AIK+IS +  R+I++RD  RFH  + G CSC D+W
Sbjct: 648 AIKLISVVTSRKIVVRDAVRFHCIEGGICSCNDYW 682



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 195/407 (47%), Gaps = 20/407 (4%)

Query: 71  DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQ 130
           DL     +H +++   +  D+   N L++ Y K  R+  A  +FD MP RN +S    + 
Sbjct: 26  DLSKGKALHARLITAAH-FDVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMS 84

Query: 131 GYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDS 190
           GY  S +  E++ L   +      +N +  +A +    ++   ++         K G   
Sbjct: 85  GYASSGRHKESLQLLRVV---DFGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFAE 141

Query: 191 NAFVGTALIDAFSVCGCVEFARKVFDGL-------FNDC---------FEEALNFFSQMR 234
             +V  A++  +  C  +E A KVF+ +       FN            + +L     M 
Sbjct: 142 QRYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMT 201

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
               K +  ++  VL  C  +    +    H  ALK   E+++YV  AL+D+Y K   + 
Sbjct: 202 GEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVH 261

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
           +A R FE +P+K+V+ W+ ++  Y Q +L  DA++LF  M    V PN+FT+   L +CA
Sbjct: 262 DANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSCA 321

Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
            +  L  GN + + V++ G    + VSNALM++Y+K G +E++  +F   P R+ V+WN 
Sbjct: 322 GLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNL 381

Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
           +I GY   G   + M  F  ML   V  + VT+  VL ACA L  ++
Sbjct: 382 IITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVD 428



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 169/349 (48%), Gaps = 19/349 (5%)

Query: 28  LSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGN 87
           +S  A+    + S      + F ++E+   S A S  + +++ D+      H   +K G 
Sbjct: 83  MSGYASSGRHKESLQLLRVVDFGMNEY-VLSAAVSATANVRSYDM--GRQCHGYAVKAGF 139

Query: 88  CLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFST 147
               +  N +L +Y +   + DA+K+F+ +   +  +F + I GY    Q   ++G+   
Sbjct: 140 AEQRYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRN 199

Query: 148 LHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGC 207
           +  E  + +  ++ A L    SM  + L   V A   K   + N +VG+AL+D +  C  
Sbjct: 200 MTGEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDH 259

Query: 208 VEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKA 251
           V  A + F+ L                 N+ +E+AL  F  M   G +PN FT+A  L +
Sbjct: 260 VHDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNS 319

Query: 252 CLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPW 311
           C GL  +R   +   C +KT +   L V+ AL+++Y+KSG I +A R+F  MP +DV+ W
Sbjct: 320 CAGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSW 379

Query: 312 SFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLD 360
           + +I  YA   L+ + +E F  M  A V P+  TFV VL ACA +  +D
Sbjct: 380 NLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVD 428



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 138/292 (47%), Gaps = 19/292 (6%)

Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
           L  G  +H+ ++      DV + N L+  YAKCGR+  +  +F   P RN V+ N ++ G
Sbjct: 27  LSKGKALHARLITAAHF-DVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMSG 85

Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
           Y   G   +++ +   +        E   S+ + A A++ + + G Q H   VKA +   
Sbjct: 86  YASSGRHKESLQLLRVV---DFGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFAEQ 142

Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
             V NA++ MY +C  + DA  VF+ ++ ++  ++N+MI+GY   G     L +   M  
Sbjct: 143 RYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMTG 202

Query: 539 RGWRPNNLTFVGVLSACSNG-----GLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGR 593
              + + +++V VL  C++      G     +A  K +  N  +       +++V + G+
Sbjct: 203 EAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVG------SALVDMYGK 256

Query: 594 AGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPE 645
             H+  A +  E +P + +V+ W A++ A   +   E+   + Q  LD E E
Sbjct: 257 CDHVHDANRAFEVLP-EKNVVSWTAVMTA---YTQNELYEDALQLFLDMEME 304


>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 750

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 209/638 (32%), Positives = 347/638 (54%), Gaps = 39/638 (6%)

Query: 198 LIDAFSVCGCVEFARKVFDGLFN----------------DCFEEALNFFSQMRAVGFKPN 241
           ++  +  CG +E A K+FD + +                   ++A+  FS+M   G KP 
Sbjct: 122 VLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPP 181

Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
           +  +  +LK+ +    + + +  H   ++     +  +   ++++Y K G +  A+R+F+
Sbjct: 182 SSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFD 241

Query: 302 EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL 361
           +M  K  + W+ ++  Y Q   + DA++LF  +    V  + F F  VL+ACA++E L  
Sbjct: 242 QMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEELRF 301

Query: 362 GNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQ 421
           G QIH+ V ++GL  +V V   L+D Y KC   E++   F E  + N V+W+ +I GY Q
Sbjct: 302 GKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQ 361

Query: 422 LGEVGKAMIMFSKMLEEQ-VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV 480
           + +  +A+  F  +  +  V     TY+S+ +AC+ LA    G QVH   +K +      
Sbjct: 362 MSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQY 421

Query: 481 VANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRG 540
             +ALI MY+KCG + DA  VF+ M++ + V+W A ISG++ +G ++E L++F+ M   G
Sbjct: 422 GESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCG 481

Query: 541 WRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKA 600
            +PN++TF+ VL+ACS+ GL+EQG+ Y  +M+  Y + P I+HY  M+ +  R+G LD+A
Sbjct: 482 MKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEA 541

Query: 601 AKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMA 660
            + ++ +PF+P  M W+  L  C  H N+E+G+++ + +   +PED A +VL  N+Y  A
Sbjct: 542 LRFMKNMPFEPDAMSWKCFLSGCWTHKNLELGKIAGEELRQLDPEDTAGYVLPFNLYTWA 601

Query: 661 RSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKS 709
             WE+AA            KE   SWI+ +G +H F  GD  H     I   L+  +   
Sbjct: 602 GKWEEAAEVMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQSQEIYEKLKEFD--- 658

Query: 710 RKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPS--SPIRIIKNLRICVD 767
              G+   +   +      E+   L  HSE+LA+AF L  +  +  +PI++ KNLR C D
Sbjct: 659 ---GF---MEGDMFQCSMTERREQLLDHSERLAIAFGLISVNGNARAPIKVFKNLRACPD 712

Query: 768 CHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           CH   K +S +   EI+IRD  RFHHF++G CSC D+W
Sbjct: 713 CHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 750



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 252/521 (48%), Gaps = 27/521 (5%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
           +SY    ++C +   L     +H ++        +   N +L +Y +   L DA KLFDE
Sbjct: 82  YSYQCLFEACRELRSLSHGRLLHNRMRMGIENPSVLLQNCVLQMYCECGSLEDADKLFDE 141

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
           M + N +S  T I  Y       +AVGLFS +   G +     +T  LK LV+    ++ 
Sbjct: 142 MSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLVNPRALDIG 201

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-----------GLFNDCFE- 224
             + A V + G  SNA + T +++ +  CG +  A++VFD           GL     + 
Sbjct: 202 RQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQA 261

Query: 225 ----EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
               +AL  F  +   G + ++F F+ VLKAC  L+ +R  K  H C  K   E ++ V 
Sbjct: 262 GRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECEVSVG 321

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR-QAFV 339
             L+D Y K     +A R F+E+ + + + WS +I+ Y Q     +AV+ F  +R +  V
Sbjct: 322 TPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAV 381

Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
             N FT+ S+ QAC+ +   ++G Q+H+  ++  L+   +  +AL+ +Y+KCG ++++ E
Sbjct: 382 VLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAHE 441

Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
           +F      + V W   I G+   G   +A+ +F KM+   +    VT+ +VL AC+    
Sbjct: 442 VFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGL 501

Query: 460 LEPGMQ-VHCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMI 517
           +E G   +  +  K N    +   + +ID+YA+ G + +A R + +M  + + +SW   +
Sbjct: 502 VEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALRFMKNMPFEPDAMSWKCFL 561

Query: 518 SGYSMH------GLSAEVLKVFDLMQQRGW-RPNNL-TFVG 550
           SG   H       ++ E L+  D     G+  P NL T+ G
Sbjct: 562 SGCWTHKNLELGKIAGEELRQLDPEDTAGYVLPFNLYTWAG 602



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 200/411 (48%), Gaps = 15/411 (3%)

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           EA  FF +M   G   + +++  + +AC  L ++   +  H           + +   +L
Sbjct: 64  EAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHNRMRMGIENPSVLLQNCVL 123

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
            +Y + G + +A ++F+EM   + +  + MI+ YA+  L   AV LF RM ++   P   
Sbjct: 124 QMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPPSS 183

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
            + ++L++      LD+G QIH+ V+R GL S+  +   ++++Y KCG +  +  +F + 
Sbjct: 184 MYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQM 243

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
             +  V W  ++VGY Q G    A+ +F  ++ E V      +S VL+ACASL  L  G 
Sbjct: 244 AVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEELRFGK 303

Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
           Q+H    K   + +V V   L+D Y KC S   A   F  + + N+VSW+A+ISGY    
Sbjct: 304 QIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMS 363

Query: 525 LSAEVLKVF-DLMQQRGWRPNNLTFVGVLSACS-----NGGLLEQGEAYFKSMV-ANYGI 577
              E +K F  L  +     N+ T+  +  ACS     N G     +A  +S++ + YG 
Sbjct: 364 QFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYG- 422

Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
                  ++++++  + G LD A ++ E +   P ++ W A +     + N
Sbjct: 423 ------ESALITMYSKCGCLDDAHEVFESMD-NPDIVAWTAFISGHAYYGN 466



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 181/382 (47%), Gaps = 19/382 (4%)

Query: 56  SHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFD 115
           S  Y T L+S +    L     IH  V++ G C +      ++N+YVK   L  A ++FD
Sbjct: 182 SSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFD 241

Query: 116 EMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAEL 175
           +M  +  +++   + GYT + +  +A+ LF  L  EG E + F F+  LK   S+     
Sbjct: 242 QMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEELRF 301

Query: 176 CPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--NDC----------- 222
              + ACV KLG +    VGT L+D +  C   E A + F  +   ND            
Sbjct: 302 GKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQ 361

Query: 223 ---FEEALNFFSQMRAV-GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
              FEEA+  F  +R+      N+FT+  + +AC  L    +    H  A+K       Y
Sbjct: 362 MSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQY 421

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
              AL+ +Y+K G + +A  +FE M   D++ W+  I+ +A    + +A+ LF +M    
Sbjct: 422 GESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCG 481

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQ-IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
           + PN  TF++VL AC+    ++ G   + +++ +  +   +   + ++D+YA+ G ++ +
Sbjct: 482 MKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEA 541

Query: 398 VELFAESP-KRNHVTWNTMIVG 418
           +      P + + ++W   + G
Sbjct: 542 LRFMKNMPFEPDAMSWKCFLSG 563



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 133/298 (44%), Gaps = 24/298 (8%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E++S  ++  L++C   ++L+    IH  V K G   ++     L++ Y+K +    A +
Sbjct: 280 EWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACR 339

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH-REGHELNPFAFTAFLKVLVSMG 171
            F E+ E N +S+   I GY   SQF EAV  F +L  +    LN F +T+  +    + 
Sbjct: 340 AFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLA 399

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF-------- 223
              +   V A   K     + +  +ALI  +S CGC++ A +VF+ + N           
Sbjct: 400 DCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFIS 459

Query: 224 --------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALK---TC 272
                    EAL  F +M + G KPN+ TF  VL AC     +   K      L+     
Sbjct: 460 GHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVA 519

Query: 273 YEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWS-FMIARYAQTDLSIDAV 328
             +D Y    ++D+Y +SG +  A R  + MP + D + W  F+   +   +L +  +
Sbjct: 520 PTIDHY--DCMIDIYARSGLLDEALRFMKNMPFEPDAMSWKCFLSGCWTHKNLELGKI 575


>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
          Length = 616

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 207/550 (37%), Positives = 311/550 (56%), Gaps = 44/550 (8%)

Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL 359
           F    + D   W+ MI   + +D    ++ L+ RM       N +TF  +L+AC+ +   
Sbjct: 67  FNGFDRPDTFLWNLMIRGLSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAF 126

Query: 360 DLGNQIHSLVVRVGLLSDVFVSNALMDVYA------------------------------ 389
               QIH+ + + G   D++  N+L++ YA                              
Sbjct: 127 QETTQIHAHITKFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGY 186

Query: 390 -KCGRMENSVELFAESPKRNH-VTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTY 447
            K G M+ ++ LF + P++N+ ++W TMI GYVQ G   +A+ +F +M    VP   V+ 
Sbjct: 187 VKAGEMDMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSL 246

Query: 448 SSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND 507
           +S L AC+ L ALE G  +H    K    +D V+   LIDMYAKCG + +A  VF  M  
Sbjct: 247 ASALSACSQLGALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKT 306

Query: 508 WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAY 567
            +   W A+ISGY+ HGL  E +  F  MQ  G +PN +TF  VL+ACS  GL+E+G++ 
Sbjct: 307 KSVQVWTALISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGKSV 366

Query: 568 FKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
           F ++  +Y ++P IEHY  MV LLGRAG L++A + I+ +P +P+ +IW +LL AC IH 
Sbjct: 367 FNTIERDYNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLLKACQIHK 426

Query: 628 NVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWI 676
           N+E+G    + +++ +      +V ++NI+AM + W+KAA            K PG S I
Sbjct: 427 NIELGEKIGEILIEMDSNHGGRYVHMANIHAMGKKWDKAAETRRLMREQGVVKVPGCSAI 486

Query: 677 ENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVRED-EKERYLW 735
             +G  H F AGD SHA++  IR    ++  K  + GY+P+L  +L D+ +D EKE  + 
Sbjct: 487 SLEGTTHEFLAGDRSHAEIQEIRTKWRFVRRKLEENGYVPELEDMLLDLVDDEEKEAIVH 546

Query: 736 VHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQ 795
            HSEKLA+ + L K  P + IRI+KNLR+C DCH  + +ISKI +R+I++RD  RFHHF+
Sbjct: 547 QHSEKLAITYGLMKTKPGTTIRIMKNLRVCKDCHKVMNLISKIYKRDIVMRDRTRFHHFK 606

Query: 796 DGCCSCGDFW 805
           DG CSCGD+W
Sbjct: 607 DGKCSCGDYW 616



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 156/339 (46%), Gaps = 36/339 (10%)

Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
           +D  + +L  + +M       N +TF F+LKAC  L   +     H    K  Y  D+Y 
Sbjct: 88  SDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAFQETTQIHAHITKFGYGHDIYA 147

Query: 280 AVALLDLYT-------------------------------KSGEISNARRIFEEMPKKD- 307
             +L++ Y                                K+GE+  A  +F +MP+K+ 
Sbjct: 148 VNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVKAGEMDMALTLFRKMPEKNN 207

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
            I W+ MI+ Y Q  ++ +A++LF  M+ + V P+  +  S L AC+ +  L+ G  IHS
Sbjct: 208 AISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALSACSQLGALEQGKWIHS 267

Query: 368 LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK 427
              +     D  +   L+D+YAKCG ME ++ +F     ++   W  +I GY   G   +
Sbjct: 268 YANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTKSVQVWTALISGYAYHGLGRE 327

Query: 428 AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--AL 485
           A+  F +M    V    +T+++VL AC+    +E G  V   T++ +Y++   + +   +
Sbjct: 328 AISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGKSVFN-TIERDYNLKPTIEHYGCM 386

Query: 486 IDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
           +D+  + G + +A R +  M    N V W +++    +H
Sbjct: 387 VDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLLKACQIH 425



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 94/384 (24%), Positives = 158/384 (41%), Gaps = 61/384 (15%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N++++   L++C      Q    IH  + K G   D++A N L+N Y        A  LF
Sbjct: 109 NAYTFPFLLKACSNLSAFQETTQIHAHITKFGYGHDIYAVNSLINSYAVTGNFKHAHLLF 168

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D + E + +S+ + I+GY  + +   A+ LF                             
Sbjct: 169 DRIQEPDAVSWNSVIKGYVKAGEMDMALTLFR---------------------------- 200

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMR 234
                     K+   +NA   T +I  +   G  +               EAL  F +M+
Sbjct: 201 ----------KMPEKNNAISWTTMISGYVQAGMNK---------------EALQLFHEMQ 235

Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
                P+N + A  L AC  L  +   K  H  A KT   +D  +   L+D+Y K GE+ 
Sbjct: 236 NSNVPPDNVSLASALSACSQLGALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEME 295

Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
            A  +F+ M  K V  W+ +I+ YA   L  +A+  F  M+   V PN  TF +VL AC+
Sbjct: 296 EALGVFKNMKTKSVQVWTALISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACS 355

Query: 355 TMEGLDLGNQIHSLVVR-VGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTW 412
               ++ G  + + + R   L   +     ++D+  + G +  +     + P K N V W
Sbjct: 356 YTGLVEEGKSVFNTIERDYNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAVIW 415

Query: 413 NTM-----IVGYVQLGE-VGKAMI 430
            ++     I   ++LGE +G+ +I
Sbjct: 416 GSLLKACQIHKNIELGEKIGEILI 439



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 150/334 (44%), Gaps = 49/334 (14%)

Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
           +S LQ C T   L    QIH+ +++ GLL D +     +           + ++F     
Sbjct: 15  LSCLQKCPTEVEL---KQIHARMLKSGLLQDPYAMTKFLSFCLSSSFSSYAHDVFFNGFD 71

Query: 407 R-NHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
           R +   WN MI G     +  ++++++ +ML    P    T+  +L+AC++L+A +   Q
Sbjct: 72  RPDTFLWNLMIRGLSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAFQETTQ 131

Query: 466 VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA---------- 515
           +H    K  Y  D+   N+LI+ YA  G+   A L+FD + + + VSWN+          
Sbjct: 132 IHAHITKFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVKAGE 191

Query: 516 ----------------------MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLS 553
                                 MISGY   G++ E L++F  MQ     P+N++    LS
Sbjct: 192 MDMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALS 251

Query: 554 ACSNGGLLEQGE---AYF-KSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF 609
           ACS  G LEQG+   +Y  K+      +  C+     ++ +  + G +++A  + + +  
Sbjct: 252 ACSQLGALEQGKWIHSYANKTRTRIDSVLCCV-----LIDMYAKCGEMEEALGVFKNMKT 306

Query: 610 QPSVMIWRALLGACIIHNNVEIGRLSAQHILDFE 643
           + SV +W AL+     H    +GR +    L+ +
Sbjct: 307 K-SVQVWTALISGYAYHG---LGREAISKFLEMQ 336


>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 754

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 227/665 (34%), Positives = 354/665 (53%), Gaps = 39/665 (5%)

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDC 222
           V   V K G   N FV + L++ ++ CG +E AR+VF+ +                 N  
Sbjct: 86  VHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFENMPRRNVVAWTTLMVGFVQNSQ 145

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
            + A++ F +M   G  P+ +T + VL AC  L ++++    H   +K   + D  V  A
Sbjct: 146 PKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTSVGSA 205

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
           L  LY+K G + +A + F  + +K+VI W+  ++        +  + LF  M    + PN
Sbjct: 206 LCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSACGDNGAPVKGLRLFVEMISEDIKPN 265

Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
           +FT  S L  C  +  L+LG Q+ SL ++ G  S++ V N+L+ +Y K G +  +   F 
Sbjct: 266 EFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAHRFFN 325

Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGK-----------AMIMFSKMLEEQVPATEVTYSSVL 451
                + VTWN MI G+ Q+ E+ K           A+ +FSK+ +  +     T SSVL
Sbjct: 326 RMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKLNQSGMKPDLFTLSSVL 385

Query: 452 RACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEV 511
             C+ + A+E G Q+H  T+K  +  DV+V+ +LI MY KCGSI  A   F  M+    +
Sbjct: 386 SVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSIERASKAFLEMSTRTMI 445

Query: 512 SWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSM 571
           +W +MI+G+S HG+S + L +F+ M   G RPN +TFVGVLSACS+ G++ Q   YF+ M
Sbjct: 446 AWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSACSHAGMVSQALNYFEIM 505

Query: 572 VANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEI 631
              Y I+P ++HY  MV +  R G L++A   I+ + ++PS  IW   +  C  H N+E+
Sbjct: 506 QKKYKIKPVMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCRSHGNLEL 565

Query: 632 GRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQG 680
           G  +++ +L  +P+D  T+VLL N+Y  A  ++  +            K    SWI  + 
Sbjct: 566 GFYASEQLLSLKPKDPETYVLLLNMYLSADRFDDVSRVRKMMEVEKVGKLKDWSWISIKD 625

Query: 681 MVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWV-HSE 739
            V+ F+  D +H   ++I   LE L  K++  GY    S  + D  E+EK     + HSE
Sbjct: 626 KVYSFKTNDKTHPPSSLICKSLEDLLAKAKNLGYEMLESVEISDEEEEEKTSSPTIYHSE 685

Query: 740 KLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCC 799
           KLA+ F L  +P SSPIR++K+  IC D H  IK +S +  REII++D  R H F +G C
Sbjct: 686 KLAITFGLENLPNSSPIRVVKSTLICRDSHNFIKCVSTLTGREIIVKDSKRLHKFVNGEC 745

Query: 800 SCGDF 804
           SCG+F
Sbjct: 746 SCGNF 750



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 144/496 (29%), Positives = 233/496 (46%), Gaps = 31/496 (6%)

Query: 59  YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
           Y   LQ C+          +H  V+K G   + F  + L+NVY K   + DA ++F+ MP
Sbjct: 67  YVPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFENMP 126

Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
            RN +++ T + G+  +SQ   A+ +F  +   G   + +  +A L    S+   +L   
Sbjct: 127 RRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGDQ 186

Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDC 222
             A + K   D +  VG+AL   +S CG +E A K F  +                 N  
Sbjct: 187 FHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSACGDNGA 246

Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
             + L  F +M +   KPN FT    L  C  + ++ +        +K  YE +L V  +
Sbjct: 247 PVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRVRNS 306

Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQ-TDLSID----------AVELF 331
           LL LY KSG I  A R F  M    ++ W+ MIA +AQ  +L+ D          A+++F
Sbjct: 307 LLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIF 366

Query: 332 CRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC 391
            ++ Q+ + P+ FT  SVL  C+ M  ++ G QIH+  ++ G LSDV VS +L+ +Y KC
Sbjct: 367 SKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKC 426

Query: 392 GRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVL 451
           G +E + + F E   R  + W +MI G+ Q G   +A+ +F  M    V    VT+  VL
Sbjct: 427 GSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVL 486

Query: 452 RACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDARLVFDMMN-DW 508
            AC+    +   +    +  K  Y +  V+ +   ++DM+ + G +  A      MN + 
Sbjct: 487 SACSHAGMVSQALNYFEIMQK-KYKIKPVMDHYECMVDMFVRLGRLEQALNFIKKMNYEP 545

Query: 509 NEVSWNAMISGYSMHG 524
           +E  W+  I+G   HG
Sbjct: 546 SEFIWSNFIAGCRSHG 561



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 202/366 (55%), Gaps = 12/366 (3%)

Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
           +L+ CL   +    +  HG  +KT    + +V   L+++Y K G + +ARR+FE MP+++
Sbjct: 70  LLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFENMPRRN 129

Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
           V+ W+ ++  + Q      A+ +F  M  A   P+ +T  +VL AC++++ L LG+Q H+
Sbjct: 130 VVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGDQFHA 189

Query: 368 LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK 427
            +++  L  D  V +AL  +Y+KCGR+E++++ F+   ++N ++W + +      G   K
Sbjct: 190 YIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSACGDNGAPVK 249

Query: 428 AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALID 487
            + +F +M+ E +   E T +S L  C  + +LE G QV  L +K  Y+ ++ V N+L+ 
Sbjct: 250 GLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRVRNSLLY 309

Query: 488 MYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM------HGLSA-----EVLKVFDLM 536
           +Y K G I +A   F+ M+D + V+WNAMI+G++         LSA     E LK+F  +
Sbjct: 310 LYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKL 369

Query: 537 QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGH 596
            Q G +P+  T   VLS CS    +EQGE      +    +   I   TS++S+  + G 
Sbjct: 370 NQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVS-TSLISMYNKCGS 428

Query: 597 LDKAAK 602
           +++A+K
Sbjct: 429 IERASK 434



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 141/277 (50%), Gaps = 2/277 (0%)

Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
           +V +LQ C           +H  V++ G   + FV + L++VYAKCG ME++  +F   P
Sbjct: 67  YVPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFENMP 126

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
           +RN V W T++VG+VQ  +   A+ +F +ML      +  T S+VL AC+SL +L+ G Q
Sbjct: 127 RRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGDQ 186

Query: 466 VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGL 525
            H   +K + D D  V +AL  +Y+KCG + DA   F  + + N +SW + +S    +G 
Sbjct: 187 FHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSACGDNGA 246

Query: 526 SAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYT 585
             + L++F  M     +PN  T    LS C     LE G     S+   +G E  +    
Sbjct: 247 PVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVC-SLCIKFGYESNLRVRN 305

Query: 586 SMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           S++ L  ++G + +A +    +    S++ W A++  
Sbjct: 306 SLLYLYLKSGFIVEAHRFFNRMD-DVSMVTWNAMIAG 341



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 123/493 (24%), Positives = 201/493 (40%), Gaps = 73/493 (14%)

Query: 57  HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
           ++ +  L +C     L+     H  ++K     D    + L ++Y K  RL DA K F  
Sbjct: 166 YTLSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSR 225

Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
           + E+N IS+ + +     +   V+ + LF  +  E  + N F  T+ L     +   EL 
Sbjct: 226 IREKNVISWTSAVSACGDNGAPVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELG 285

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL------------------ 218
             V +   K G++SN  V  +L+  +   G +  A + F+ +                  
Sbjct: 286 TQVCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQM 345

Query: 219 -------FNDCFE--EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCAL 269
                   + C    EAL  FS++   G KP+ FT + VL  C  +  I   +  H   +
Sbjct: 346 MELTKDNLSACQRGSEALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTI 405

Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVE 329
           KT +  D+ V+ +L+ +Y K G I  A + F EM  + +I W+ MI  ++Q  +S  A+ 
Sbjct: 406 KTGFLSDVIVSTSLISMYNKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALH 465

Query: 330 LFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYA 389
           +F  M  A V PN  TFV VL AC+                  G++S       +M    
Sbjct: 466 IFEDMSLAGVRPNTVTFVGVLSACS----------------HAGMVSQALNYFEIMQKKY 509

Query: 390 KCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSS 449
           K              P  +H  +  M+  +V+LG + +A+    KM  E    +E  +S+
Sbjct: 510 KI------------KPVMDH--YECMVDMFVRLGRLEQALNFIKKMNYE---PSEFIWSN 552

Query: 450 VLRACASLAALEPGMQV--HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMM-- 505
            +  C S   LE G       L++K   D +  V   L++MY       D   V  MM  
Sbjct: 553 FIAGCRSHGNLELGFYASEQLLSLKPK-DPETYV--LLLNMYLSADRFDDVSRVRKMMEV 609

Query: 506 ------NDWNEVS 512
                  DW+ +S
Sbjct: 610 EKVGKLKDWSWIS 622


>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
 gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 603

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 205/565 (36%), Positives = 335/565 (59%), Gaps = 16/565 (2%)

Query: 256 DTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKS---GEISNARRIFEEMPKKDVIPWS 312
           +++R        A+K+  E D+     L++  T+S     +S AR +FE M + D++ ++
Sbjct: 40  NSLRELMQIQAYAIKSHIE-DVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFN 98

Query: 313 FMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV 372
            M   Y++    ++   LF  + +  + P+ +TF S+L+ACA  + L+ G Q+H L +++
Sbjct: 99  SMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKL 158

Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMF 432
           GL  +V+V   L+++Y +C  ++++  +F    +   V +N MI GY +     +A+ +F
Sbjct: 159 GLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLF 218

Query: 433 SKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKC 492
            +M  + +   E+T  SVL +CA L +L+ G  +H    K ++   V V  ALIDM+AKC
Sbjct: 219 REMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKC 278

Query: 493 GSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL 552
           GS+ DA  +F+ M   +  +W+AMI  Y+ HG + + + +F+ M+    +P+ +TF+G+L
Sbjct: 279 GSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLL 338

Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
           +ACS+ G +E+G  YF  MV+ +GI P I+HY SMV LL RAG+L+ A + I+ +P  P+
Sbjct: 339 NACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPT 398

Query: 613 VMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE-------- 664
            M+WR LL AC  HNN+++    ++ I + +      +V+LSN+YA  + WE        
Sbjct: 399 PMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKV 458

Query: 665 ---KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAV 721
              + A K PG S IE   +VH F +GD   +    +   L+ +  + + +GY+PD S V
Sbjct: 459 MKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMV 518

Query: 722 LR-DVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQ 780
           +  ++ + EKE  L  HSEKLA+ F L   PP + IR++KNLR+C DCH A K+IS I  
Sbjct: 519 VHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFG 578

Query: 781 REIIIRDVHRFHHFQDGCCSCGDFW 805
           R++++RDV RFHHF+DG CSCGDFW
Sbjct: 579 RKVVLRDVQRFHHFEDGKCSCGDFW 603



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 171/322 (53%), Gaps = 6/322 (1%)

Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
           E  + F ++   G  P+N+TF  +LKAC     +   +  H  ++K   + ++YV   L+
Sbjct: 112 EVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLI 171

Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
           ++YT+  ++ +AR +F+ + +  V+ ++ MI  YA+ +   +A+ LF  M+  ++ PN+ 
Sbjct: 172 NMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEI 231

Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           T +SVL +CA +  LDLG  IH    +      V V+ AL+D++AKCG ++++V +F + 
Sbjct: 232 TLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKM 291

Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
             ++   W+ MIV Y   G+  K+M+MF +M  E V   E+T+  +L AC+    +E G 
Sbjct: 292 RYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGR 351

Query: 465 QVHCLTV-KANYDMDVVVANALIDMYAKCGSITDARLVFDMMN-DWNEVSWNAMISGYSM 522
           +     V K      +    +++D+ ++ G++ DA    D +      + W  +++  S 
Sbjct: 352 KYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSS 411

Query: 523 HG---LSAEVL-KVFDLMQQRG 540
           H    L+ +V  ++F+L    G
Sbjct: 412 HNNLDLAEKVSERIFELDDSHG 433



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 150/313 (47%), Gaps = 17/313 (5%)

Query: 110 ATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS 169
           A  LF+ M E + + F +  +GY+  +  +E   LF  +  +G   + + F + LK    
Sbjct: 82  ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141

Query: 170 MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF------ 223
               E    +     KLG D N +V   LI+ ++ C  V+ AR VFD +   C       
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201

Query: 224 ----------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCY 273
                      EAL+ F +M+    KPN  T   VL +C  L ++ + K  H  A K  +
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF 261

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
              + V  AL+D++ K G + +A  IFE+M  KD   WS MI  YA    +  ++ +F R
Sbjct: 262 CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFER 321

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS-LVVRVGLLSDVFVSNALMDVYAKCG 392
           MR   V P++ TF+ +L AC+    ++ G +  S +V + G++  +    +++D+ ++ G
Sbjct: 322 MRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAG 381

Query: 393 RMENSVELFAESP 405
            +E++ E   + P
Sbjct: 382 NLEDAYEFIDKLP 394



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/335 (21%), Positives = 137/335 (40%), Gaps = 65/335 (19%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +++++ + L++C     L+    +HC  +K G   +++    L+N+Y +   +  A  +F
Sbjct: 128 DNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVF 187

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS---MG 171
           D + E   + +   I GY   ++  EA+ LF  +  +G  L P   T  L VL S   +G
Sbjct: 188 DRIVEPCVVCYNAMITGYARRNRPNEALSLFREM--QGKYLKPNEIT-LLSVLSSCALLG 244

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-FNDC-------- 222
             +L   +     K        V TALID F+ CG ++ A  +F+ + + D         
Sbjct: 245 SLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIV 304

Query: 223 -------FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
                   E+++  F +MR+   +P+  TF  +L AC                       
Sbjct: 305 AYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNAC----------------------- 341

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKK-DVIP----WSFMIARYAQTDLSIDAVEL 330
                       + +G +   R+ F +M  K  ++P    +  M+   ++     DA E 
Sbjct: 342 ------------SHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEF 389

Query: 331 FCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
             ++    ++P    +  +L AC++   LDL  ++
Sbjct: 390 IDKLP---ISPTPMLWRILLAACSSHNNLDLAEKV 421


>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
 gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 843

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 226/697 (32%), Positives = 369/697 (52%), Gaps = 28/697 (4%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           +SH++   ++SC     +     +H      G   D+F  + L+ +Y     L DA ++F
Sbjct: 145 DSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVF 204

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D M ER+ + +   + GY  +     AV LF  +   G E N      FL V  +     
Sbjct: 205 DGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLF 264

Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF-----------DGLFNDCF 223
               +     K G +S   V   L+  ++ C C++   K+F           +G+ + C 
Sbjct: 265 FGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCV 324

Query: 224 E-----EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
           +     +AL  F  M+  G +P++ T   +L A   L+     K  HG  ++ C  MD++
Sbjct: 325 QNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVF 384

Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
           +  AL+D+Y K   +  A+ +++     DV+  S MI+ Y    +S +AV++F  + +  
Sbjct: 385 LVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQG 444

Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
           + PN     SVL ACA+M  + LG ++HS  ++       +V +ALMD+YAKCGR++ S 
Sbjct: 445 IRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSH 504

Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
            +F++   ++ VTWN+MI  + Q GE  +A+ +F +M  E V  + VT SSVL ACASL 
Sbjct: 505 YIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLP 564

Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
           A+  G ++H + +K     D+   +ALIDMY KCG++  A  VF+ M + NEVSWN++I+
Sbjct: 565 AIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIA 624

Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
            Y  +GL  E + +   MQ+ G++ +++TF+ ++SAC++ G +++G   F+ M   Y I 
Sbjct: 625 SYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIA 684

Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
           P +EH+  MV L  RAG LDKA +LI  +PF+P   IW ALL AC +H NVE+  +++Q 
Sbjct: 685 PRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQE 744

Query: 639 ILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRA 687
           +   +P +   +VL+SNI A+A  W+  +            K PG SW++     H F A
Sbjct: 745 LFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVA 804

Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRD 724
            D SH D   I   L+ + ++ R+ G+  DL A+L +
Sbjct: 805 ADKSHPDSEDIYMSLKSILLELREEGH-GDLIAMLSN 840



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 165/582 (28%), Positives = 288/582 (49%), Gaps = 24/582 (4%)

Query: 63  LQSCIQNDDLQTAMTIHCQVLKKG-NCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERN 121
           L+ C+    L   + +H + +  G +  D      L+ +YV   R  DA  +F  +P   
Sbjct: 46  LRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRGA 105

Query: 122 ---TISFVTTIQGYTVSSQFVEAVGLFSTL--HREGHELNPFAFTAFLKVLVSMGWAELC 176
               + +   I+G T++  +  A+  +  +  H      +   F   +K   ++G   L 
Sbjct: 106 AACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALG 165

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF-NDC------------- 222
             V      LG D + FVG+ALI  ++  G +  AR+VFDG+   DC             
Sbjct: 166 RLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKA 225

Query: 223 --FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
                A+  F  MRA G +PN  T A  L        +      H  A+K   E ++ VA
Sbjct: 226 GSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVA 285

Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
             L+ +Y K   + +  ++F  MP+ D++ W+ MI+   Q      A+ LFC M+++ + 
Sbjct: 286 NTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIR 345

Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
           P+  T VS+L A   + G + G ++H  +VR  +  DVF+ +AL+D+Y KC  +  +  +
Sbjct: 346 PDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSV 405

Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
           +  S   + V  +TMI GYV  G   +A+ MF  +LE+ +    V  +SVL ACAS+AA+
Sbjct: 406 YDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAM 465

Query: 461 EPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY 520
           + G ++H   +K  Y+    V +AL+DMYAKCG +  +  +F  ++  +EV+WN+MIS +
Sbjct: 466 KLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSF 525

Query: 521 SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPC 580
           + +G   E L +F  M   G + +N+T   VLSAC++   +  G+     +V    I   
Sbjct: 526 AQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKE-IHGVVIKGPIRAD 584

Query: 581 IEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
           +   ++++ + G+ G+L+ A ++ E +P +  V  W +++ +
Sbjct: 585 LFAESALIDMYGKCGNLEWAHRVFESMPEKNEVS-WNSIIAS 625



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 133/490 (27%), Positives = 235/490 (47%), Gaps = 20/490 (4%)

Query: 53  EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
           E N  + A  L       DL   + +H   +K G   ++   N L+++Y K   L D  K
Sbjct: 244 EPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWK 303

Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFV-EAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
           LF  MP  + +++   I G  V + FV +A+ LF  + + G   +     + L  L  + 
Sbjct: 304 LFGLMPRDDLVTWNGMISG-CVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLN 362

Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG-------------- 217
                  +   + +     + F+ +AL+D +  C  V  A+ V+D               
Sbjct: 363 GFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMIS 422

Query: 218 --LFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
             + N   +EA+  F  +   G +PN    A VL AC  +  +++ +  H  ALK  YE 
Sbjct: 423 GYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEG 482

Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
             YV  AL+D+Y K G +  +  IF ++  KD + W+ MI+ +AQ     +A+ LF  M 
Sbjct: 483 RCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMC 542

Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
              V  +  T  SVL ACA++  +  G +IH +V++  + +D+F  +AL+D+Y KCG +E
Sbjct: 543 MEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLE 602

Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
            +  +F   P++N V+WN++I  Y   G V +++ +   M EE   A  VT+ +++ ACA
Sbjct: 603 WAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACA 662

Query: 456 SLAALEPGMQV-HCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSW 513
               ++ G+++  C+T +      +     ++D+Y++ G +  A  L+ DM    +   W
Sbjct: 663 HAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIW 722

Query: 514 NAMISGYSMH 523
            A++    +H
Sbjct: 723 GALLHACRVH 732



 Score = 43.1 bits (100), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 8/187 (4%)

Query: 449 SVLRACASLAALEPGMQVHCLTVKAN-YDMDVVVANALIDMYAKCGSITDARLVFDMMND 507
           +VLR C S + L  G+QVH   V A  +  D  +   L+ MY       DA  VF  +  
Sbjct: 44  AVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPR 103

Query: 508 WN---EVSWNAMISGYSMHGLSAEVLKVFDLM--QQRGWRPNNLTFVGVLSACSNGGLLE 562
                 + WN +I G +M G     L  +  M        P++ TF  V+ +C+  G + 
Sbjct: 104 GAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIA 163

Query: 563 QGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
            G    ++     G++  +   ++++ +    G L  A ++ +G+  +  V+ W  ++  
Sbjct: 164 LGRLVHRT-ARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVL-WNVMMDG 221

Query: 623 CIIHNNV 629
            +   +V
Sbjct: 222 YVKAGSV 228


>gi|356534091|ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic-like [Glycine max]
          Length = 903

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 244/776 (31%), Positives = 404/776 (52%), Gaps = 43/776 (5%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N  + +++L+SC    + +    IH  V+K G  L+      L+++Y K +   +  KL 
Sbjct: 116 NEFTLSSALRSCSALGEFEFGAKIHASVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKLL 175

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
             + + + +S+ T I     +S++ EA+ L+  +   G   N F F   L +   +G  +
Sbjct: 176 AFVKDGDVVSWTTMISSLVETSKWSEALQLYVKMIEAGIYPNEFTFVKLLGMPSFLGLGK 235

Query: 175 -LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKV---------------FDGL 218
                + + +   G + N  + TA+I  ++ C  +E A KV                 G 
Sbjct: 236 GYGKVLHSQLITFGVEMNLMLKTAIICMYAKCRRMEDAIKVSQQTPKYDVCLWTSIISGF 295

Query: 219 F-NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
             N    EA+N    M   G  PNNFT+A +L A   + ++ + +  H   +    E D+
Sbjct: 296 VQNSQVREAVNALVDMELSGILPNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDI 355

Query: 278 YVAVALLDLYTK-SGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
           YV  AL+D+Y K S   +N  + F  +   +VI W+ +IA +A+     ++V+LF  M+ 
Sbjct: 356 YVGNALVDMYMKCSHTTTNGVKAFRGIALPNVISWTSLIAGFAEHGFEEESVQLFAEMQA 415

Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
           A V PN FT  ++L AC+ M+ +    ++H  +++  +  D+ V NAL+D YA  G  + 
Sbjct: 416 AGVQPNSFTLSTILGACSKMKSIIQTKKLHGYIIKTQVDIDMAVGNALVDAYAGGGMADE 475

Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
           +  +      R+ +T+ T+     Q G+   A+ + + M  ++V   E + +S + A A 
Sbjct: 476 AWSVIGMMNHRDIITYTTLAARLNQQGDHEMALRVITHMCNDEVKMDEFSLASFISAAAG 535

Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
           L  +E G Q+HC + K+ ++    V+N+L+  Y+KCGS+ DA  VF  + + + VSWN +
Sbjct: 536 LGIMETGKQLHCYSFKSGFERCNSVSNSLVHSYSKCGSMRDAYRVFKDITEPDRVSWNGL 595

Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
           ISG + +GL ++ L  FD M+  G +P+++TF+ ++ ACS G LL QG  YF SM   Y 
Sbjct: 596 ISGLASNGLISDALSAFDDMRLAGVKPDSVTFLSLIFACSQGSLLNQGLDYFYSMEKTYH 655

Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
           I P ++HY  +V LLGR G L++A  +IE +PF+P  +I++ LL AC +H NV +G   A
Sbjct: 656 ITPKLDHYVCLVDLLGRGGRLEEAMGVIETMPFKPDSVIYKTLLNACNLHGNVPLGEDMA 715

Query: 637 QHILDFEPEDEATHVLLSNIYAMAR-----------SWEKAASKEPGLSWIENQGMVHYF 685
           +  L+ +P D A ++LL+++Y  A              E+   + P   W+E +  ++ F
Sbjct: 716 RRCLELDPCDPAIYLLLASLYDNAGLPDFGDKTRKLMRERGLRRSPRQCWMEVKSKIYLF 775

Query: 686 RAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAF 745
            A +    D   I   LE L  + +  GY           +E E + Y   HSE+LALAF
Sbjct: 776 SAREKIGNDE--INEKLESLITEIKNRGY---------PYQESEDKLY---HSEQLALAF 821

Query: 746 ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSC 801
            +  +P  +PIRI KN  IC  CH+ I ++++ V REII+RD  RFH F+DG CSC
Sbjct: 822 GVLSVPTLAPIRINKNSLICTHCHSFIMLLTQFVDREIIVRDRKRFHVFKDGQCSC 877



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 180/667 (26%), Positives = 311/667 (46%), Gaps = 49/667 (7%)

Query: 55  NSHSYATSLQSCIQ------NDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLP 108
           NS S     ++C+Q      +  L+    +H  ++K G   DL+ +N LL +Y K   + 
Sbjct: 9   NSFSPCRFRETCLQVLSLCNSQTLKEGACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVG 68

Query: 109 DATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLV 168
            A  LFDEMP R+ +S+ T +  +T +    EA+ LF  +   G   N F  ++ L+   
Sbjct: 69  QARHLFDEMPHRDVVSWTTLLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCS 128

Query: 169 SMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF----DG------- 217
           ++G  E    + A V KLG + N  +GT L+D ++ C C     K+     DG       
Sbjct: 129 ALGEFEFGAKIHASVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTT 188

Query: 218 -----LFNDCFEEALNFFSQMRAVGFKPNNFTFAFVL--KACLGLDTIRVAKSAHGCALK 270
                +    + EAL  + +M   G  PN FTF  +L   + LGL      K  H   + 
Sbjct: 189 MISSLVETSKWSEALQLYVKMIEAGIYPNEFTFVKLLGMPSFLGLGK-GYGKVLHSQLIT 247

Query: 271 TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVEL 330
              EM+L +  A++ +Y K   + +A ++ ++ PK DV  W+ +I+ + Q     +AV  
Sbjct: 248 FGVEMNLMLKTAIICMYAKCRRMEDAIKVSQQTPKYDVCLWTSIISGFVQNSQVREAVNA 307

Query: 331 FCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAK 390
              M  + + PN FT+ S+L A +++  L+LG Q HS V+ VGL  D++V NAL+D+Y K
Sbjct: 308 LVDMELSGILPNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDIYVGNALVDMYMK 367

Query: 391 CGR-MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSS 449
           C     N V+ F      N ++W ++I G+ + G   +++ +F++M    V     T S+
Sbjct: 368 CSHTTTNGVKAFRGIALPNVISWTSLIAGFAEHGFEEESVQLFAEMQAAGVQPNSFTLST 427

Query: 450 VLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWN 509
           +L AC+ + ++    ++H   +K   D+D+ V NAL+D YA  G   +A  V  MMN  +
Sbjct: 428 ILGACSKMKSIIQTKKLHGYIIKTQVDIDMAVGNALVDAYAGGGMADEAWSVIGMMNHRD 487

Query: 510 EVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAY-- 567
            +++  + +  +  G     L+V   M     + +  +    +SA +  G++E G+    
Sbjct: 488 IITYTTLAARLNQQGDHEMALRVITHMCNDEVKMDEFSLASFISAAAGLGIMETGKQLHC 547

Query: 568 --FKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACII 625
             FKS     G E C     S+V    + G +  A ++ + I  +P  + W  L+   + 
Sbjct: 548 YSFKS-----GFERCNSVSNSLVHSYSKCGSMRDAYRVFKDIT-EPDRVSWNGLISG-LA 600

Query: 626 HNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAASKEPGLSWIENQGMVHYF 685
            N +    LSA   +        +   LS I+A ++              + NQG+ +++
Sbjct: 601 SNGLISDALSAFDDMRLAGVKPDSVTFLSLIFACSQ------------GSLLNQGLDYFY 648

Query: 686 RAGDTSH 692
               T H
Sbjct: 649 SMEKTYH 655


>gi|302816964|ref|XP_002990159.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
 gi|300142014|gb|EFJ08719.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
          Length = 849

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 248/776 (31%), Positives = 403/776 (51%), Gaps = 56/776 (7%)

Query: 68  QNDDLQTAMTIHCQVL-KKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFV 126
           Q+ D+    TI   +   K    D    N ++  Y K   + DA  +F  +   N  S+ 
Sbjct: 92  QSGDVTALKTIQAHISHSKRFAGDRLLLNCVVEAYGKCGCVKDARLVFSSIRHPNVYSWT 151

Query: 127 TTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG-WAEL--CPCVFACV 183
             +  Y  +      + L   +   G   N       +  +  +G W E        A  
Sbjct: 152 ILLAAYAQNGHHKTVLELLRQMDLLGVWPNAVTLATVIGAVSELGNWDEARKIHARAAAT 211

Query: 184 YKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFE----------------EAL 227
            +L +D    + TALID ++ CG +  A  VFD   N                    +A+
Sbjct: 212 CQLTYD--VVLVTALIDMYAKCGDIFHAEVVFDQARNKDLACCNAMISAYIQLGYTVDAV 269

Query: 228 NFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLY 287
           + F++++  G +PN  T+A + +AC        A+ AH C + +    D+ V  AL+ +Y
Sbjct: 270 STFNRIQPSGLQPNQVTYALLFRACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMY 329

Query: 288 TKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFV 347
           ++ G + +ARR+F+ MP K+V+ W+ MIA YAQ   + +A++L+  M  A V P++ TFV
Sbjct: 330 SRCGSLEDARRVFDRMPGKNVVTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFV 389

Query: 348 SVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE--SP 405
           +VL++C+  E L  G  IH  VV  G  S + V +AL+ +Y+ CG + ++V++F +  + 
Sbjct: 390 NVLESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTT 449

Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
             + ++W  M+    + GE   A+ +F KM  E V A  VT+ S + AC+S+ AL  G  
Sbjct: 450 HSSVISWTAMLTALTRNGEGRSALALFRKMDLEGVRANVVTFVSTIDACSSIGALVEGHA 509

Query: 466 VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG- 524
           +    +   + +DVV+  +LI++Y KCG +  A  VF  ++  N V+WN +++  S +G 
Sbjct: 510 IFERVIVTGHLIDVVLGTSLINLYGKCGRLDYALEVFHYLSFKNIVTWNTILAASSQNGE 569

Query: 525 --LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIE 582
             LS E+L+  DL    G +PN +T + +L  CS+ GL+ +  +YF+SMV  + + P  E
Sbjct: 570 ETLSDELLQEMDL---DGAQPNEMTLLNMLFGCSHNGLVAKAVSYFRSMVYGHCLVPTSE 626

Query: 583 HYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDF 642
           HY  +V LLGR+G L++    I   PF    ++W +LLG+C+IH++VE G  +A+ +L  
Sbjct: 627 HYGCLVDLLGRSGQLEEVEAFISSKPFSLDSVLWMSLLGSCVIHSDVERGLRAARRVLGL 686

Query: 643 EPEDEATHVLLSNIYA----------MAR-SWEKAASKEPGLSWIENQGMVHYFRAGDTS 691
           +P++ + +VLLSN++A          +A+ + E+A  KE   S+IE  G+VH F      
Sbjct: 687 DPKNASPYVLLSNMFAAIGMLDAVKSLAKLAGERAMKKEQSRSYIEVNGVVHEFGVRAGL 746

Query: 692 HADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMP 751
           H     I   L   + +  +AG++P     L DVR          H EKLA+AF     P
Sbjct: 747 HRLGEKIGAQLREWSEEMEEAGFVP-----LHDVR--------GYHDEKLAIAFGAISSP 793

Query: 752 PSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQ--DGCCSCGDFW 805
           P  P+ ++KNLR+CV CH  IK I K+  R+I +R+ +R HHF+  D  CSCGD+W
Sbjct: 794 PGVPLFVVKNLRMCVCCHGEIKHICKMTGRDISVREGNRVHHFRPMDASCSCGDYW 849



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 87/213 (40%), Gaps = 18/213 (8%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE- 116
           ++   L+SC   + L     IH  V+  G    L   + L+ +Y     L DA  +F + 
Sbjct: 387 TFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKG 446

Query: 117 -MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAEL 175
                + IS+   +   T + +   A+ LF  +  EG   N   F + +    S+G    
Sbjct: 447 VTTHSSVISWTAMLTALTRNGEGRSALALFRKMDLEGVRANVVTFVSTIDACSSIGALVE 506

Query: 176 CPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-FNDCF----------- 223
              +F  V   GH  +  +GT+LI+ +  CG +++A +VF  L F +             
Sbjct: 507 GHAIFERVIVTGHLIDVVLGTSLINLYGKCGRLDYALEVFHYLSFKNIVTWNTILAASSQ 566

Query: 224 --EEALN--FFSQMRAVGFKPNNFTFAFVLKAC 252
             EE L+     +M   G +PN  T   +L  C
Sbjct: 567 NGEETLSDELLQEMDLDGAQPNEMTLLNMLFGC 599


>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 809

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 233/644 (36%), Positives = 353/644 (54%), Gaps = 65/644 (10%)

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNN 242
           V KLG DS+ +V   LI+ FSVC  +  A +VF            N  S + +V +    
Sbjct: 104 VLKLGFDSDVYVRNTLINCFSVCSNMTDACRVF------------NESSVLDSVSWNS-- 149

Query: 243 FTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEE 302
                +L   + +  +  AK  +        E  +  + +++ L+   G +  A ++F+E
Sbjct: 150 -----ILAGYIEIGNVEEAKHIY----HQMPERSIIASNSMIVLFGMRGLVVEACKLFDE 200

Query: 303 MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG 362
           M +KD++ WS +IA + Q ++  +A+  F  M +  V  ++   VS L ACA +  +++G
Sbjct: 201 MLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMG 260

Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
             IHSL +++G  S + + NAL+ +Y+KCG +  + +LF E+   + ++WN+MI GY++ 
Sbjct: 261 KLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKC 320

Query: 423 GEVGKAMIMFSKMLEEQVPA-------------------------------TEVTYSSVL 451
             V  A  +F  M E+ V +                                E T  SV+
Sbjct: 321 NLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVI 380

Query: 452 RACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEV 511
            ACA LAALE G  VH    +    ++V++   LIDMY KCG +  A  VF  M +    
Sbjct: 381 SACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGIS 440

Query: 512 SWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSM 571
           +WNA+I G +M+GL    L +F  M++    PN +TF+GVL AC + GL+++G+ +F SM
Sbjct: 441 TWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSM 500

Query: 572 VANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEI 631
           + ++ I+P ++HY  MV LLGRAG L +A +L+  +P  P V  W ALLGAC  H + E+
Sbjct: 501 IHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEM 560

Query: 632 GRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQG 680
           GR   + +++ +P+ +  HVLLSNIYA    W+               K PG S IE  G
Sbjct: 561 GRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANG 620

Query: 681 MVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEK 740
           ++H F AGD +H DM+ I  ML  + MK +  GY PD++ VL DV E+EKE  L+ HSEK
Sbjct: 621 VIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDVDEEEKESTLFRHSEK 680

Query: 741 LALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREII 784
           LA+AF L  + P +PIRI+KNLRIC DCHTA K+ISK   R+I+
Sbjct: 681 LAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIV 724



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 133/507 (26%), Positives = 236/507 (46%), Gaps = 60/507 (11%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           ++++Y   +Q+C        A  +H  VLK G   D++  N L+N +   + + DA ++F
Sbjct: 77  DNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVF 136

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           +E    +++S+ + + GY       EA  ++       H++   +  A   ++V  G   
Sbjct: 137 NESSVLDSVSWNSILAGYIEIGNVEEAKHIY-------HQMPERSIIASNSMIVLFGMRG 189

Query: 175 LCPCVFAC-VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQM 233
           L   V AC ++    + +    +ALI  F                 N+ +EEA+  F  M
Sbjct: 190 L--VVEACKLFDEMLEKDMVTWSALIACFQQ---------------NEMYEEAIRTFVGM 232

Query: 234 RAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
             +G   +       L AC  L  + + K  H  +LK   E  + +  AL+ +Y+K G+I
Sbjct: 233 HKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDI 292

Query: 294 -------------------------------SNARRIFEEMPKKDVIPWSFMIARYAQTD 322
                                           NA+ IF+ MP+KDV+ WS MI+ YAQ D
Sbjct: 293 MVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQND 352

Query: 323 LSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSN 382
           L  + + LF  M+ +   P++ T VSV+ ACA +  L+ G  +H+ + R GL  +V +  
Sbjct: 353 LFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGT 412

Query: 383 ALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPA 442
            L+D+Y KCG +E ++E+F    ++   TWN +I+G    G V  ++ MFS M +  V  
Sbjct: 413 TLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTP 472

Query: 443 TEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDARL 500
            E+T+  VL AC  +  ++ G Q H  ++  ++ +   V +   ++D+  + G + +A  
Sbjct: 473 NEITFMGVLGACRHMGLVDEG-QHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEE 531

Query: 501 VFDMMNDWNEV-SWNAMISGYSMHGLS 526
           + + M    +V +W A++     HG S
Sbjct: 532 LLNRMPMTPDVATWGALLGACKKHGDS 558



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/451 (22%), Positives = 198/451 (43%), Gaps = 54/451 (11%)

Query: 39  CSNSTTTPITFSVSE-FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVL 97
           CSN T     F+ S   +S S+ + L   I+  +++ A  I+ Q+ ++     + A+N +
Sbjct: 126 CSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERS----IIASNSM 181

Query: 98  LNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNP 157
           + ++     + +A KLFDEM E++ +++   I  +  +  + EA+  F  +H+ G  ++ 
Sbjct: 182 IVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDE 241

Query: 158 FAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG 217
               + L    ++    +   + +   K+G +S   +  ALI  +S CG +  ARK+FD 
Sbjct: 242 VVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDE 301

Query: 218 LF-----------------------------------------------NDCFEEALNFF 230
            +                                               ND F+E L  F
Sbjct: 302 AYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALF 361

Query: 231 SQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKS 290
            +M+  GFKP+  T   V+ AC  L  +   K  H    +    +++ +   L+D+Y K 
Sbjct: 362 QEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKC 421

Query: 291 GEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVL 350
           G +  A  +F  M +K +  W+ +I   A   L   ++++F  M++  V PN+ TF+ VL
Sbjct: 422 GCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVL 481

Query: 351 QACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNH 409
            AC  M  +D G +  +S++    +  +V     ++D+  + G+++ + EL    P    
Sbjct: 482 GACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPD 541

Query: 410 V-TWNTMIVGYVQLGEVGKAMIMFSKMLEEQ 439
           V TW  ++    + G+      +  K++E Q
Sbjct: 542 VATWGALLGACKKHGDSEMGRRVGRKLIELQ 572



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/355 (22%), Positives = 166/355 (46%), Gaps = 45/355 (12%)

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           I   RRIF  +   +   W+ MI  Y QT+    A  L+  M   ++  + +T+  ++QA
Sbjct: 28  IDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQA 87

Query: 353 CATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTW 412
           C+         Q+H+ V+++G  SDV+V N L++ ++ C  M ++  +F ES   + V+W
Sbjct: 88  CSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSW 147

Query: 413 NTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK 472
           N+++ GY+++G V +A  ++ +M E                                   
Sbjct: 148 NSILAGYIEIGNVEEAKHIYHQMPERS--------------------------------- 174

Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
                 ++ +N++I ++   G + +A  +FD M + + V+W+A+I+ +  + +  E ++ 
Sbjct: 175 ------IIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRT 228

Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLG 592
           F  M + G   + +  V  LSAC+N  ++  G+    S+    G E  I    +++ +  
Sbjct: 229 FVGMHKIGVMVDEVVAVSALSACANLLVVNMGK-LIHSLSLKIGTESYINLQNALIYMYS 287

Query: 593 RAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDE 647
           + G +  A KL +   +   ++ W +++   +  N V+    +A+ I D  PE +
Sbjct: 288 KCGDIMVARKLFDE-AYLLDLISWNSMISGYLKCNLVD----NAKAIFDSMPEKD 337


>gi|297802258|ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314849|gb|EFH45272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 693

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 219/627 (34%), Positives = 339/627 (54%), Gaps = 43/627 (6%)

Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
           C ++ L    Q+     KP   T+  +++ C     +   K  H     + +   + +  
Sbjct: 67  CGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWN 126

Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM------- 334
            +L +Y K G + +AR++F+EMP++DV  W+ M+  YA+  L  +A  LF  M       
Sbjct: 127 RILGMYAKCGSLVDARKVFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDSYS 186

Query: 335 --------------RQAFV-----------APNQFTFVSVLQACATMEGLDLGNQIHSLV 369
                          +A V            PN FT  S + A A ++ +  G +IH  +
Sbjct: 187 WTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHI 246

Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAM 429
           VR GL SD  + ++LMD+Y KCG ++ +  +F +   ++ V+W +MI  Y +     +  
Sbjct: 247 VRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWREGF 306

Query: 430 IMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMY 489
            +FS+++       E T+S VL ACA L   E G QVH    +  +D     +++LIDMY
Sbjct: 307 SLFSELIGSCERPNEYTFSGVLNACADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDMY 366

Query: 490 AKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFV 549
            KCG+I  AR V D     + VS  ++I GY+ +G   E LK FDL+ + G +P+++TFV
Sbjct: 367 TKCGNIESARHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFV 426

Query: 550 GVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPF 609
            VLSAC++ GL+E+G  +F S+   + +    +HYT +V LL R+G  ++   ++  +P 
Sbjct: 427 NVLSACTHAGLVEKGLEFFYSITEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEMPM 486

Query: 610 QPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-- 667
           +PS  +W ++LG C  + N+++   +AQ +   EPE+  T+V ++NIYA A  WE+    
Sbjct: 487 KPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKM 546

Query: 668 ---------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDL 718
                    +K+PG SW E +   H F A DTSH   N I   L  L  K ++ GY+P  
Sbjct: 547 RKRMQEIGITKKPGSSWTEIKRKRHVFIAADTSHPMYNQIIEFLGELRKKMKEEGYVPAT 606

Query: 719 SAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKI 778
           S VL DV +++KE  L  HSEKLA+AFA+      + I++ KNLR CVDCH+AIK ISKI
Sbjct: 607 SLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHSAIKFISKI 666

Query: 779 VQREIIIRDVHRFHHFQDGCCSCGDFW 805
            +R+I IRD  RFH F++G CSC D+W
Sbjct: 667 TKRKITIRDSTRFHCFENGQCSCRDYW 693



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 174/346 (50%), Gaps = 19/346 (5%)

Query: 198 LIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAV-GFKP 240
           +++ ++  G +E AR +FD +                  D  EEAL  +S M+ V   KP
Sbjct: 159 MVNGYAEVGLLEEARNLFDEMPERDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSKP 218

Query: 241 NNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIF 300
           N FT +  + A   +  IR  K  HG  ++   + D  +  +L+D+Y K G I  AR IF
Sbjct: 219 NIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIF 278

Query: 301 EEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLD 360
           +++  KDV+ W+ MI RY ++    +   LF  +  +   PN++TF  VL ACA +   +
Sbjct: 279 DKIIDKDVVSWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTFSGVLNACADLTTEE 338

Query: 361 LGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYV 420
           LG Q+H  + RVG     F S++L+D+Y KCG +E++  +    PK + V+  ++I GY 
Sbjct: 339 LGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVVDGCPKPDLVSLTSLIGGYA 398

Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ-VHCLTVKANYDMDV 479
           Q G+  +A+  F  +L+       VT+ +VL AC     +E G++  + +T K +     
Sbjct: 399 QNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHDLTHTS 458

Query: 480 VVANALIDMYAKCGSITDARLVF-DMMNDWNEVSWNAMISGYSMHG 524
                L+D+ A+ G     + V  +M    ++  W +++ G S +G
Sbjct: 459 DHYTCLVDLLARSGRFEQLKSVLSEMPMKPSKFLWASVLGGCSTYG 504



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 112/454 (24%), Positives = 198/454 (43%), Gaps = 60/454 (13%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           +Y   +Q C Q   L+    +H  +   G    +   N +L +Y K   L DA K+FDEM
Sbjct: 89  TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGMYAKCGSLVDARKVFDEM 148

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC- 176
           PER+  S+   + GY       EA  LF     E  E + +++TA +   V     E   
Sbjct: 149 PERDVCSWNVMVNGYAEVGLLEEARNLFD----EMPERDSYSWTAMVTGYVKKDQPEEAL 204

Query: 177 -------------PCVFAC----------------------VYKLGHDSNAFVGTALIDA 201
                        P +F                        + + G DS+  + ++L+D 
Sbjct: 205 VLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDM 264

Query: 202 FSVCGCVEFARKVFDGLFN----------------DCFEEALNFFSQMRAVGFKPNNFTF 245
           +  CGC++ AR +FD + +                  + E  + FS++     +PN +TF
Sbjct: 265 YGKCGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTF 324

Query: 246 AFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPK 305
           + VL AC  L T  + +  HG   +  ++   + + +L+D+YTK G I +AR + +  PK
Sbjct: 325 SGVLNACADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVVDGCPK 384

Query: 306 KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQ- 364
            D++  + +I  YAQ     +A++ F  + ++   P+  TFV+VL AC     ++ G + 
Sbjct: 385 PDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEF 444

Query: 365 IHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMIVGYVQLG 423
            +S+  +  L         L+D+ A+ GR E    + +E P K +   W +++ G    G
Sbjct: 445 FYSITEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEMPMKPSKFLWASVLGGCSTYG 504

Query: 424 EVGKAMIMFSKM--LEEQVPATEVTYSSVLRACA 455
            +  A     ++  +E + P T VT +++  A  
Sbjct: 505 NIDLAEEAAQELFKIEPENPVTYVTMANIYAAAG 538



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/348 (24%), Positives = 144/348 (41%), Gaps = 66/348 (18%)

Query: 72  LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
           ++    IH  +++ G   D    + L+++Y K   + +A  +FD++ +++ +S+ + I  
Sbjct: 236 IRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTSMIDR 295

Query: 132 YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSN 191
           Y  SS++ E   LFS L       N + F+  L     +   EL   V   + ++G D  
Sbjct: 296 YFKSSRWREGFSLFSELIGSCERPNEYTFSGVLNACADLTTEELGRQVHGYMTRVGFDPY 355

Query: 192 AFVGTALIDAFSVCGCVEFARKVFDG----------------LFNDCFEEALNFFSQMRA 235
           +F  ++LID ++ CG +E AR V DG                  N   +EAL +F  +  
Sbjct: 356 SFASSSLIDMYTKCGNIESARHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLK 415

Query: 236 VGFKPNNFTFAFVLKACL-------GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYT 288
            G KP++ TF  VL AC        GL+        H       +  D Y    L+DL  
Sbjct: 416 SGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHDLT----HTSDHY--TCLVDLLA 469

Query: 289 KSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVS 348
           +SG     + +  EMP K                                  P++F + S
Sbjct: 470 RSGRFEQLKSVLSEMPMK----------------------------------PSKFLWAS 495

Query: 349 VLQACATMEGLDLGNQIHSLVVRVGLLSDV-FVSNALMDVYAKCGRME 395
           VL  C+T   +DL  +    + ++   + V +V+ A  ++YA  G+ E
Sbjct: 496 VLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMA--NIYAAAGKWE 541



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/252 (21%), Positives = 102/252 (40%), Gaps = 24/252 (9%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           N ++++  L +C      +    +H  + + G     FA++ L+++Y K   +  A  + 
Sbjct: 320 NEYTFSGVLNACADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVV 379

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           D  P+ + +S  + I GY  + +  EA+  F  L + G + +   F   L      G  E
Sbjct: 380 DGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVE 439

Query: 175 LCPCVFACV---YKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFS 231
                F  +   + L H S+ +  T L+D  +  G                FE+  +  S
Sbjct: 440 KGLEFFYSITEKHDLTHTSDHY--TCLVDLLARSG---------------RFEQLKSVLS 482

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
           +M     KP+ F +A VL  C     I +A+ A     K   E  +   V + ++Y  +G
Sbjct: 483 EM---PMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPV-TYVTMANIYAAAG 538

Query: 292 EISNARRIFEEM 303
           +     ++ + M
Sbjct: 539 KWEEEGKMRKRM 550


>gi|225468727|ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
          Length = 558

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 214/526 (40%), Positives = 317/526 (60%), Gaps = 18/526 (3%)

Query: 293 ISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQA 352
           +S AR IF+ +   D   ++ +I  +A +  S        +M  A V+P+ FTF  VL+A
Sbjct: 38  LSYARSIFDLIAFPDTFAFNTIIRAHADSSPSFSLSLFS-KMAMAGVSPDHFTFPFVLKA 96

Query: 353 CATME-GLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
           CA ++ GLDL    HSL+ ++G  SDV+V N L+  Y  CG ++ ++++F E P+R+ V+
Sbjct: 97  CARLQTGLDL----HSLLFKLGFDSDVYVQNGLIHFYGCCGFLDFALKVFEEMPERDLVS 152

Query: 412 WNTMIVGYVQLGEVGKAMIMFSKM-LEEQVPATEVTYSSVLRACASLAALEPGMQVHCLT 470
           W++MI  + + G   +A+ +F +M L   V   EV   SV+ A + L  LE G  +    
Sbjct: 153 WSSMIACFAKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFI 212

Query: 471 VKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVL 530
            +   +  V +  AL+DM+++CG I ++  VFD M + N ++W A+I+G ++HG SAE L
Sbjct: 213 SRNGLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLAVHGRSAEAL 272

Query: 531 KVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSL 590
           ++F  M+  G++P+++TF GVL ACS+GGL+ +G   F+S+   YG+EP  EHY  MV L
Sbjct: 273 RMFYEMRNHGFQPDHVTFTGVLVACSHGGLVSEGWHVFESIRNEYGMEPLPEHYGCMVDL 332

Query: 591 LGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATH 650
           LGRAG L++A K ++G+P +P+ +IWR LLGAC+ HN +E+     + I + +   +  +
Sbjct: 333 LGRAGLLNEACKFVDGMPIRPNSIIWRTLLGACVNHNYIELAEKVKEKINELDSYHDGDY 392

Query: 651 VLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIR 699
           VLLSN+Y     W           EK  SK+PG S I    ++H F AGD +H     IR
Sbjct: 393 VLLSNVYGGVGRWAEKAGVRNSMREKRISKKPGCSLINVNHLIHEFVAGDNNHPQFESIR 452

Query: 700 GMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRII 759
             L  +    +  GY PD+S VL D+ E+EKE  L  HSEKLA+AFAL     S  IR++
Sbjct: 453 EFLVSMIDSLKVVGYTPDISNVLFDIEEEEKESTLGYHSEKLAVAFALLCFKDSRTIRVM 512

Query: 760 KNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
           KNLRIC DCH  +K  S + +REIIIRD +RFHHF  G CSC D+W
Sbjct: 513 KNLRICHDCHCFMKYASDVFEREIIIRDRNRFHHFSKGSCSCRDYW 558



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 125/272 (45%), Gaps = 24/272 (8%)

Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND----------CFE------EA 226
           ++KLG DS+ +V   LI  +  CG ++FA KVF+ +             CF       EA
Sbjct: 110 LFKLGFDSDVYVQNGLIHFYGCCGFLDFALKVFEEMPERDLVSWSSMIACFAKNGFGYEA 169

Query: 227 LNFFSQMRAVG-FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
           L  F +M+ VG  KP+      V+ A   L  + + K   G   +   E  + +  AL+D
Sbjct: 170 LALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFTVSLGTALVD 229

Query: 286 LYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFT 345
           ++++ G I  + R+F+EM +++V+ W+ +I   A    S +A+ +F  MR     P+  T
Sbjct: 230 MFSRCGCIEESMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVT 289

Query: 346 FVSVLQACATMEGLDLGNQI-HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
           F  VL AC+    +  G  +  S+    G+         ++D+  + G +  + +     
Sbjct: 290 FTGVLVACSHGGLVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDGM 349

Query: 405 PKR-NHVTWNTMIVG-----YVQLGEVGKAMI 430
           P R N + W T++       Y++L E  K  I
Sbjct: 350 PIRPNSIIWRTLLGACVNHNYIELAEKVKEKI 381



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 136/282 (48%), Gaps = 30/282 (10%)

Query: 58  SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
           ++   L++C +   LQT + +H  + K G   D++  N L++ Y     L  A K+F+EM
Sbjct: 89  TFPFVLKACAR---LQTGLDLHSLLFKLGFDSDVYVQNGLIHFYGCCGFLDFALKVFEEM 145

Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGH-ELNPFAFTAFLKVLVSMGWAELC 176
           PER+ +S+ + I  +  +    EA+ LF  +   G  + +     + +  +  +G  EL 
Sbjct: 146 PERDLVSWSSMIACFAKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELG 205

Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-----------GLFNDCF-- 223
             +   + + G +    +GTAL+D FS CGC+E + +VFD            L N     
Sbjct: 206 KWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLAVH 265

Query: 224 ---EEALNFFSQMRAVGFKPNNFTFAFVLKACL--GLDTIRVAKSAHGC-ALKTCYEMDL 277
               EAL  F +MR  GF+P++ TF  VL AC   GL    V++  H   +++  Y M+ 
Sbjct: 266 GRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSHGGL----VSEGWHVFESIRNEYGMEP 321

Query: 278 YVA--VALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
                  ++DL  ++G ++ A +  + MP + + I W  ++ 
Sbjct: 322 LPEHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSIIWRTLLG 363


>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
 gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g16835, mitochondrial; AltName: Full=Protein DYW10;
           Flags: Precursor
 gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
          Length = 656

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 220/544 (40%), Positives = 314/544 (57%), Gaps = 20/544 (3%)

Query: 274 EMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCR 333
           E D +    +L  Y ++     A+  F+ MP KD   W+ MI  YA+      A ELF  
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYS 180

Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
           M +     N+ ++ +++     +E  DL    H    +V  +  V    A++  Y K  +
Sbjct: 181 MMEK----NEVSWNAMISG--YIECGDLEKASH--FFKVAPVRGVVAWTAMITGYMKAKK 232

Query: 394 MENSVELFAE-SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLR 452
           +E +  +F + +  +N VTWN MI GYV+       + +F  MLEE +       SS L 
Sbjct: 233 VELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALL 292

Query: 453 ACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS 512
            C+ L+AL+ G Q+H +  K+    DV    +LI MY KCG + DA  +F++M   + V+
Sbjct: 293 GCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVA 352

Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
           WNAMISGY+ HG + + L +F  M     RP+ +TFV VL AC++ GL+  G AYF+SMV
Sbjct: 353 WNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMV 412

Query: 573 ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIG 632
            +Y +EP  +HYT MV LLGRAG L++A KLI  +PF+P   ++  LLGAC +H NVE+ 
Sbjct: 413 RDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELA 472

Query: 633 RLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGM 681
             +A+ +L    ++ A +V L+NIYA    WE  A            K PG SWIE +  
Sbjct: 473 EFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNK 532

Query: 682 VHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKL 741
           VH+FR+ D  H +++ I   L+ L  K + AGY P+L   L +V E++KE+ L  HSEKL
Sbjct: 533 VHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKL 592

Query: 742 ALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSC 801
           A+AF   K+P  S I++ KNLRIC DCH AIK IS+I +REII+RD  RFHHF+DG CSC
Sbjct: 593 AVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSC 652

Query: 802 GDFW 805
           GD+W
Sbjct: 653 GDYW 656



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 150/340 (44%), Gaps = 30/340 (8%)

Query: 90  DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
           D F+ N++L+ YV+      A   FD MP ++  S+ T I GY    +  +A  LF ++ 
Sbjct: 123 DTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMM 182

Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
               E N  ++ A +   +  G  E     F    K+         TA+I  +     VE
Sbjct: 183 ----EKNEVSWNAMISGYIECGDLEKASHFF----KVAPVRGVVAWTAMITGYMKAKKVE 234

Query: 210 FARKVFDGLF-----------------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKAC 252
            A  +F  +                  N   E+ L  F  M   G +PN+   +  L  C
Sbjct: 235 LAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGC 294

Query: 253 LGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWS 312
             L  +++ +  H    K+    D+    +L+ +Y K GE+ +A ++FE M KKDV+ W+
Sbjct: 295 SELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWN 354

Query: 313 FMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR- 371
            MI+ YAQ   +  A+ LF  M    + P+  TFV+VL AC     +++G      +VR 
Sbjct: 355 AMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRD 414

Query: 372 --VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNH 409
             V    D +    ++D+  + G++E +++L    P R H
Sbjct: 415 YKVEPQPDHYT--CMVDLLGRAGKLEEALKLIRSMPFRPH 452



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 144/344 (41%), Gaps = 49/344 (14%)

Query: 288 TKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFV 347
            +SG+I  A R+F  M  K+ I W+ ++       +S D   +                 
Sbjct: 72  VRSGDIDGALRVFHGMRAKNTITWNSLL-----IGISKDPSRM----------------- 109

Query: 348 SVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKR 407
                   ME   L ++I           D F  N ++  Y +    E +   F   P +
Sbjct: 110 --------MEAHQLFDEIPE--------PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK 153

Query: 408 NHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVH 467
           +  +WNTMI GY + GE+ KA  +F  M+E+     EV++++++        LE      
Sbjct: 154 DAASWNTMITGYARRGEMEKARELFYSMMEK----NEVSWNAMISGYIECGDLEKASHF- 208

Query: 468 CLTVKANYDMDVVVANALIDMYAKCGSITDARLVF-DMMNDWNEVSWNAMISGYSMHGLS 526
               K      VV   A+I  Y K   +  A  +F DM  + N V+WNAMISGY  +   
Sbjct: 209 ---FKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRP 265

Query: 527 AEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTS 586
            + LK+F  M + G RPN+      L  CS    L+ G      +V+   +   +   TS
Sbjct: 266 EDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQ-IHQIVSKSTLCNDVTALTS 324

Query: 587 MVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
           ++S+  + G L  A KL E +  +  V+ W A++     H N +
Sbjct: 325 LISMYCKCGELGDAWKLFEVMK-KKDVVAWNAMISGYAQHGNAD 367



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/201 (23%), Positives = 92/201 (45%), Gaps = 19/201 (9%)

Query: 378 VFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
           +F  N ++    + G ++ ++ +F     +N +TWN++++G  +      + +M +  L 
Sbjct: 61  IFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISK----DPSRMMEAHQLF 116

Query: 438 EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM----DVVVANALIDMYAKCG 493
           +++P  +    +++ +C           V+    ++ +D     D    N +I  YA+ G
Sbjct: 117 DEIPEPDTFSYNIMLSCYV-------RNVNFEKAQSFFDRMPFKDAASWNTMITGYARRG 169

Query: 494 SITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLS 553
            +  AR +F  M + NEVSWNAMISGY   G   +    F +   RG     + +  +++
Sbjct: 170 EMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRG----VVAWTAMIT 225

Query: 554 ACSNGGLLEQGEAYFKSMVAN 574
                  +E  EA FK M  N
Sbjct: 226 GYMKAKKVELAEAMFKDMTVN 246



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 58/258 (22%), Positives = 106/258 (41%), Gaps = 24/258 (9%)

Query: 55  NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
           NS   +++L  C +   LQ    IH  V K   C D+ A   L+++Y K   L DA KLF
Sbjct: 283 NSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLF 342

Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
           + M +++ +++   I GY       +A+ LF  +       +   F A L      G   
Sbjct: 343 EVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVN 402

Query: 175 LCPCVFACV---YKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFS 231
           +    F  +   YK+    + +  T ++D     G +E A K+                 
Sbjct: 403 IGMAYFESMVRDYKVEPQPDHY--TCMVDLLGRAGKLEEALKL----------------- 443

Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
            +R++ F+P+   F  +L AC     + +A+ A    L+   + +    V L ++Y    
Sbjct: 444 -IRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQ-NAAGYVQLANIYASKN 501

Query: 292 EISNARRIFEEMPKKDVI 309
              +  R+ + M + +V+
Sbjct: 502 RWEDVARVRKRMKESNVV 519


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.325    0.136    0.417 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,647,679,042
Number of Sequences: 23463169
Number of extensions: 450929157
Number of successful extensions: 1542414
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8557
Number of HSP's successfully gapped in prelim test: 3174
Number of HSP's that attempted gapping in prelim test: 1319021
Number of HSP's gapped (non-prelim): 71038
length of query: 805
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 654
effective length of database: 8,816,256,848
effective search space: 5765831978592
effective search space used: 5765831978592
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 81 (35.8 bits)