BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039715
(805 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 901 bits (2328), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/783 (55%), Positives = 557/783 (71%), Gaps = 32/783 (4%)
Query: 51 VSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDA 110
+ +SH+Y L+ CIQ +D +A IHC +LKKG+CLDLFATN+LLN YVK DA
Sbjct: 44 IPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDA 103
Query: 111 TKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSM 170
LFDEMPERN +SFVT QGY + +GL+S LHREGHELNP FT+FLK+ VS+
Sbjct: 104 LNLFDEMPERNNVSFVTLAQGYACQ----DPIGLYSRLHREGHELNPHVFTSFLKLFVSL 159
Query: 171 GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------- 219
AE+CP + + + KLG+DSNAFVG ALI+A+SVCG V+ AR VF+G+
Sbjct: 160 DKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIV 219
Query: 220 -----NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
N FE++L S MR GF PNN+TF LKA +GL AK HG LKTCY
Sbjct: 220 SCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYV 279
Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
+D V V LL LYT+ G++S+A ++F EMPK DV+PWSFMIAR+ Q +AV+LF RM
Sbjct: 280 LDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM 339
Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
R+AFV PN+FT S+L CA + LG Q+H LVV+VG D++VSNAL+DVYAKC +M
Sbjct: 340 REAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKM 399
Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
+ +V+LFAE +N V+WNT+IVGY LGE GKA MF + L QV TEVT+SS L AC
Sbjct: 400 DTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGAC 459
Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
ASLA+++ G+QVH L +K N V V+N+LIDMYAKCG I A+ VF+ M + SWN
Sbjct: 460 ASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWN 519
Query: 515 AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
A+ISGYS HGL + L++ D+M+ R +PN LTF+GVLS CSN GL++QG+ F+SM+ +
Sbjct: 520 ALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRD 579
Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL 634
+GIEPC+EHYT MV LLGR+G LDKA KLIEGIP++PSVMIWRA+L A + NN E R
Sbjct: 580 HGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARR 639
Query: 635 SAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVH 683
SA+ IL P+DEAT+VL+SN+YA A+ W AS KEPGLSWIE+QG VH
Sbjct: 640 SAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVH 699
Query: 684 YFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLAL 743
YF G + H DM +I GMLEWLNMK+ +AGY+PD +AVL D+ ++EK++ LWVHSE+LAL
Sbjct: 700 YFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLAL 759
Query: 744 AFALFKMPPS-SPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCG 802
A+ L +MP S + I I+KNLRIC DCH+A+K+IS IVQR+++IRD++RFHHF G CSCG
Sbjct: 760 AYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCG 819
Query: 803 DFW 805
D W
Sbjct: 820 DHW 822
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 548 bits (1411), Expect = e-155, Method: Compositional matrix adjust.
Identities = 276/777 (35%), Positives = 440/777 (56%), Gaps = 29/777 (3%)
Query: 57 HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
+++++ L +C + + L+ +H VLK G D + N L+++Y L L A +F
Sbjct: 289 YAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSN 348
Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
M +R+ +++ T I G + +A+ LF +H +G E + + + + G
Sbjct: 349 MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG 408
Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF-----------------DGLF 219
+ A KLG SN + AL++ ++ C +E A F GL
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLL 468
Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
+D + F QM+ PN +T+ +LK C+ L + + + H +KT ++++ YV
Sbjct: 469 DD-LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV 527
Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
L+D+Y K G++ A I KDV+ W+ MIA Y Q + A+ F +M +
Sbjct: 528 CSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 587
Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
++ + + ACA ++ L G QIH+ G SD+ NAL+ +Y++CG++E S
Sbjct: 588 RSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYL 647
Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
F ++ +++ WN ++ G+ Q G +A+ +F +M E + T+ S ++A + A
Sbjct: 648 AFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETAN 707
Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
++ G QVH + K YD + V NALI MYAKCGSI+DA F ++ NEVSWNA+I+
Sbjct: 708 MKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINA 767
Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
YS HG +E L FD M RPN++T VGVLSACS+ GL+++G AYF+SM + YG+ P
Sbjct: 768 YSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSP 827
Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHI 639
EHY +V +L RAG L +A + I+ +P +P ++WR LL AC++H N+EIG +A H+
Sbjct: 828 KPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHL 887
Query: 640 LDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAG 688
L+ EPED AT+VLLSN+YA+++ W EK KEPG SWIE + +H F G
Sbjct: 888 LELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVG 947
Query: 689 DTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALF 748
D +H + I + L ++ + GY+ D ++L +++ ++K+ +++HSEKLA++F L
Sbjct: 948 DQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLL 1007
Query: 749 KMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
+P + PI ++KNLR+C DCH IK +SK+ REII+RD +RFHHF+ G CSC D+W
Sbjct: 1008 SLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 261 bits (666), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 166/578 (28%), Positives = 276/578 (47%), Gaps = 20/578 (3%)
Query: 63 LQSCIQ-NDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERN 121
L+ C++ N L +H Q+LK G + + L + Y+ L A K+FDEMPER
Sbjct: 91 LEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERT 150
Query: 122 TISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA-ELCPCVF 180
++ I+ + E GLF + E N F+ L+ A ++ +
Sbjct: 151 IFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIH 210
Query: 181 ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFE 224
A + G + V LID +S G V+ AR+VFDGL N+C
Sbjct: 211 ARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEA 270
Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
EA+ F M +G P + F+ VL AC ++++ + + HG LK + D YV AL+
Sbjct: 271 EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALV 330
Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
LY G + +A IF M ++D + ++ +I +Q A+ELF RM + P+
Sbjct: 331 SLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSN 390
Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
T S++ AC+ L G Q+H+ ++G S+ + AL+++YAKC +E +++ F E+
Sbjct: 391 TLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLET 450
Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
N V WN M+V Y L ++ + +F +M E++ + TY S+L+ C L LE G
Sbjct: 451 EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 510
Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
Q+H +K N+ ++ V + LIDMYAK G + A + + VSW MI+GY+ +
Sbjct: 511 QIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN 570
Query: 525 LSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY 584
+ L F M RG R + + +SAC+ L++G+ + G +
Sbjct: 571 FDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS-GFSSDLPFQ 629
Query: 585 TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
++V+L R G ++++ E ++ W AL+
Sbjct: 630 NALVTLYSRCGKIEESYLAFEQTEAGDNIA-WNALVSG 666
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 172/331 (51%), Gaps = 2/331 (0%)
Query: 237 GFKPNNFTFAFVLKACLGLD-TIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISN 295
G +PN+ T ++L+ CL + ++ + H LK + + ++ L D Y G++
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC-A 354
A ++F+EMP++ + W+ MI A +L + LF RM V PN+ TF VL+AC
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
D+ QIH+ ++ GL V N L+D+Y++ G ++ + +F ++H +W
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258
Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
MI G + +A+ +F M + T +SSVL AC + +LE G Q+H L +K
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 318
Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
+ D V NAL+ +Y G++ A +F M+ + V++N +I+G S G + +++F
Sbjct: 319 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK 378
Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGE 565
M G P++ T ++ ACS G L +G+
Sbjct: 379 RMHLDGLEPDSNTLASLVVACSADGTLFRGQ 409
Score = 166 bits (420), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 118/490 (24%), Positives = 226/490 (46%), Gaps = 20/490 (4%)
Query: 53 EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
E +S++ A+ + +C + L +H K G + LLN+Y K + A
Sbjct: 386 EPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALD 445
Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
F E N + + + Y + + +F + E N + + + LK + +G
Sbjct: 446 YFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGD 505
Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCG--------CVEFARK-------VFDG 217
EL + + + K NA+V + LID ++ G + FA K + G
Sbjct: 506 LELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAG 565
Query: 218 LFNDCFEE-ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
F++ AL F QM G + + + AC GL ++ + H A + + D
Sbjct: 566 YTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSD 625
Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
L AL+ LY++ G+I + FE+ D I W+ +++ + Q+ + +A+ +F RM +
Sbjct: 626 LPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNR 685
Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
+ N FTF S ++A + + G Q+H+++ + G S+ V NAL+ +YAKCG + +
Sbjct: 686 EGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISD 745
Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
+ + F E +N V+WN +I Y + G +A+ F +M+ V VT VL AC+
Sbjct: 746 AEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSH 805
Query: 457 LAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDAR-LVFDMMNDWNEVSW 513
+ ++ G+ + ++ + Y + + ++DM + G ++ A+ + +M + + W
Sbjct: 806 IGLVDKGI-AYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVW 864
Query: 514 NAMISGYSMH 523
++S +H
Sbjct: 865 RTLLSACVVH 874
Score = 133 bits (334), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 188/419 (44%), Gaps = 26/419 (6%)
Query: 55 NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
N ++Y + L++CI+ DL+ IH Q++K L+ + +VL+++Y KL +L A +
Sbjct: 489 NQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL 548
Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
++ +S+ T I GYT + +A+ F + G + T + + +
Sbjct: 549 IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALK 608
Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF------DGLFNDCF----- 223
+ A G S+ AL+ +S CG +E + F D + +
Sbjct: 609 EGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQ 668
Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
EEAL F +M G NNFTF +KA ++ K H KT Y+ +
Sbjct: 669 QSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETE 728
Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
V AL+ +Y K G IS+A + F E+ K+ + W+ +I Y++ +A++ F +M +
Sbjct: 729 VCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSN 788
Query: 339 VAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
V PN T V VL AC+ + +D G S+ GL ++D+ + G + +
Sbjct: 789 VRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRA 848
Query: 398 VELFAESP-KRNHVTWNTMIVGYV-----QLGEVGKAMIMFSKMLEEQVPATEVTYSSV 450
E E P K + + W T++ V ++GE ++ LE + AT V S++
Sbjct: 849 KEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLL---ELEPEDSATYVLLSNL 904
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 527 bits (1358), Expect = e-148, Method: Compositional matrix adjust.
Identities = 290/758 (38%), Positives = 424/758 (55%), Gaps = 34/758 (4%)
Query: 78 IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
+HCQ +K G D+ L++ Y+K + D K+FDEM ERN +++ T I GY +S
Sbjct: 115 LHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSM 174
Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
E + LF + EG + N F F A L VL G V V K G D V +
Sbjct: 175 NDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNS 234
Query: 198 LIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPN 241
LI+ + CG V AR +FD N EAL F MR + +
Sbjct: 235 LINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLS 294
Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
+FA V+K C L +R + H +K + D + AL+ Y+K + +A R+F+
Sbjct: 295 ESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFK 354
Query: 302 EMP-KKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLD 360
E+ +V+ W+ MI+ + Q D +AV+LF M++ V PN+FT+ +L A +
Sbjct: 355 EIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP-- 412
Query: 361 LGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYV 420
+++H+ VV+ V AL+D Y K G++E + ++F+ ++ V W+ M+ GY
Sbjct: 413 --SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYA 470
Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL-AALEPGMQVHCLTVKANYDMDV 479
Q GE A+ MF ++ + + E T+SS+L CA+ A++ G Q H +K+ D +
Sbjct: 471 QTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSL 530
Query: 480 VVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQR 539
V++AL+ MYAK G+I A VF + + VSWN+MISGY+ HG + + L VF M++R
Sbjct: 531 CVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKR 590
Query: 540 GWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDK 599
+ + +TF+GV +AC++ GL+E+GE YF MV + I P EH + MV L RAG L+K
Sbjct: 591 KVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEK 650
Query: 600 AAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAM 659
A K+IE +P IWR +L AC +H E+GRL+A+ I+ +PED A +VLLSN+YA
Sbjct: 651 AMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAE 710
Query: 660 ARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMK 708
+ W E+ KEPG SWIE + + F AGD SH + I LE L+ +
Sbjct: 711 SGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTR 770
Query: 709 SRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDC 768
+ GY PD S VL+D+ ++ KE L HSE+LA+AF L P SP+ IIKNLR+C DC
Sbjct: 771 LKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDC 830
Query: 769 HTAIKIISKIVQREIIIRDVHRFHHF-QDGCCSCGDFW 805
H IK+I+KI +REI++RD +RFHHF DG CSCGDFW
Sbjct: 831 HLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 240 bits (612), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 158/548 (28%), Positives = 277/548 (50%), Gaps = 34/548 (6%)
Query: 102 VKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFT 161
V +RL +A LFD+ P R+ S+++ + G++ + EA LF +HR G E++ F+
Sbjct: 38 VSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFS 97
Query: 162 AFLKVLVSM-----GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD 216
+ LKV ++ G C C+ K G + VGT+L+D + + RKVFD
Sbjct: 98 SVLKVSATLCDELFGRQLHCQCI-----KFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFD 152
Query: 217 GL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRV 260
+ N +E L F +M+ G +PN+FTFA L
Sbjct: 153 EMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGR 212
Query: 261 AKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQ 320
H +K + + V+ +L++LY K G + AR +F++ K V+ W+ MI+ YA
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA 272
Query: 321 TDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFV 380
L ++A+ +F MR +V ++ +F SV++ CA ++ L Q+H VV+ G L D +
Sbjct: 273 NGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332
Query: 381 SNALMDVYAKCGRMENSVELFAE-SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ 439
ALM Y+KC M +++ LF E N V+W MI G++Q +A+ +FS+M +
Sbjct: 333 RTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG 392
Query: 440 VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR 499
V E TYS +L A L + P +VH VK NY+ V AL+D Y K G + +A
Sbjct: 393 VRPNEFTYSVILTA---LPVISPS-EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAA 448
Query: 500 LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSAC-SNG 558
VF ++D + V+W+AM++GY+ G + +K+F + + G +PN TF +L+ C +
Sbjct: 449 KVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATN 508
Query: 559 GLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRA 618
+ QG+ F ++ + ++++++ + G+++ A ++ + + ++ W +
Sbjct: 509 ASMGQGKQ-FHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKR-QREKDLVSWNS 566
Query: 619 LLGACIIH 626
++ H
Sbjct: 567 MISGYAQH 574
Score = 221 bits (563), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 141/494 (28%), Positives = 251/494 (50%), Gaps = 34/494 (6%)
Query: 55 NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
NS ++A +L + + +H V+K G + +N L+N+Y+K + A LF
Sbjct: 193 NSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILF 252
Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
D+ ++ +++ + I GY + +EA+G+F ++ L+ +F + +K+ ++
Sbjct: 253 DKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELR 312
Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVC-------------GC----VEFARKVFDG 217
+ V K G + + TAL+ A+S C GC V + +
Sbjct: 313 FTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGF 372
Query: 218 LFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
L ND EEA++ FS+M+ G +PN FT++ +L A + V H +KT YE
Sbjct: 373 LQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEV----HAQVVKTNYERSS 428
Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
V ALLD Y K G++ A ++F + KD++ WS M+A YAQT + A+++F + +
Sbjct: 429 TVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKG 488
Query: 338 FVAPNQFTFVSVLQAC-ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
+ PN+FTF S+L C AT + G Q H ++ L S + VS+AL+ +YAK G +E+
Sbjct: 489 GIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIES 548
Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
+ E+F +++ V+WN+MI GY Q G+ KA+ +F +M + +V VT+ V AC
Sbjct: 549 AEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTH 608
Query: 457 LAALEPGMQVHCLTVKANYDMDVVVA------NALIDMYAKCGSITDA-RLVFDMMNDWN 509
+E G + + V+ D +A + ++D+Y++ G + A +++ +M N
Sbjct: 609 AGLVEEGEKYFDIMVR-----DCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAG 663
Query: 510 EVSWNAMISGYSMH 523
W +++ +H
Sbjct: 664 STIWRTILAACRVH 677
Score = 149 bits (376), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 171/341 (50%), Gaps = 1/341 (0%)
Query: 290 SGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSV 349
S + NA +F++ P +D + ++ +++ + +A LF + + + + F SV
Sbjct: 40 SSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSV 99
Query: 350 LQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNH 409
L+ AT+ G Q+H ++ G L DV V +L+D Y K ++ ++F E +RN
Sbjct: 100 LKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNV 159
Query: 410 VTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCL 469
VTW T+I GY + + + +F +M E T+++ L A G+QVH +
Sbjct: 160 VTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTV 219
Query: 470 TVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEV 529
VK D + V+N+LI++Y KCG++ AR++FD + V+WN+MISGY+ +GL E
Sbjct: 220 VVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEA 279
Query: 530 LKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVS 589
L +F M+ R + +F V+ C+N L E S+V YG T+++
Sbjct: 280 LGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVV-KYGFLFDQNIRTALMV 338
Query: 590 LLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
+ + A +L + I +V+ W A++ + ++ E
Sbjct: 339 AYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKE 379
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 508 bits (1308), Expect = e-143, Method: Compositional matrix adjust.
Identities = 309/816 (37%), Positives = 452/816 (55%), Gaps = 48/816 (5%)
Query: 29 SAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNC 88
SA S+ Q S T TF S T+ S + D++ I C + K G
Sbjct: 189 SAFRIFSSMQYDGSRPTEYTFG-------SLVTTACS-LTEPDVRLLEQIMCTIQKSGLL 240
Query: 89 LDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTL 148
DLF + L++ + K L A K+F++M RN ++ + G EA LF +
Sbjct: 241 TDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM 300
Query: 149 HREGHELNPFAFTAFLKVLVSMGWAELCPC-----VFACVYKLGH-DSNAFVGTALIDAF 202
+ +++P ++ L AE V V G D +G L++ +
Sbjct: 301 NSM-IDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMY 359
Query: 203 SVCGCVEFARKVF---------------DGL-FNDCFEEALNFFSQMRAVGFKPNNFTFA 246
+ CG + AR+VF GL N CF EA+ + MR P +FT
Sbjct: 360 AKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLI 419
Query: 247 FVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK 306
L +C L ++ + HG +LK ++++ V+ AL+ LY ++G ++ R+IF MP+
Sbjct: 420 SSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEH 479
Query: 307 DVIPWSFMIARYAQTDLSI-DAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
D + W+ +I A+++ S+ +AV F ++A N+ TF SVL A +++ +LG QI
Sbjct: 480 DQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQI 539
Query: 366 HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE-SPKRNHVTWNTMIVGYVQLGE 424
H L ++ + + NAL+ Y KCG M+ ++F+ + +R++VTWN+MI GY+
Sbjct: 540 HGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNEL 599
Query: 425 VGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANA 484
+ KA+ + ML+ Y++VL A AS+A LE GM+VH +V+A + DVVV +A
Sbjct: 600 LAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSA 659
Query: 485 LIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR-P 543
L+DMY+KCG + A F+ M N SWN+MISGY+ HG E LK+F+ M+ G P
Sbjct: 660 LVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPP 719
Query: 544 NNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKL 603
+++TFVGVLSACS+ GLLE+G +F+SM +YG+ P IEH++ M +LGRAG LDK
Sbjct: 720 DHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDF 779
Query: 604 IEGIPFQPSVMIWRALLGACIIHNN--VEIGRLSAQHILDFEPEDEATHVLLSNIYAMAR 661
IE +P +P+V+IWR +LGAC N E+G+ +A+ + EPE+ +VLL N+YA
Sbjct: 780 IEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGG 839
Query: 662 SWE---KA--------ASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSR 710
WE KA KE G SW+ + VH F AGD SH D ++I L+ LN K R
Sbjct: 840 RWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMR 899
Query: 711 KAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSS-PIRIIKNLRICVDCH 769
AGY+P L D+ ++ KE L HSEKLA+AF L S+ PIRI+KNLR+C DCH
Sbjct: 900 DAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCH 959
Query: 770 TAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
+A K ISKI R+II+RD +RFHHFQDG CSC DFW
Sbjct: 960 SAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 192 bits (488), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 158/595 (26%), Positives = 284/595 (47%), Gaps = 33/595 (5%)
Query: 63 LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
+QSC+ + A H ++ K D++ N L+N Y++ A K+FDEMP RN
Sbjct: 10 VQSCVGHRG--AARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNC 67
Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC--PCVF 180
+S+ + GY+ + + EA+ + +EG N +AF + L+ +G + +
Sbjct: 68 VSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIH 127
Query: 181 ACVYKLGHDSNAFVGTALIDAFSVC-GCVEFARKVFDGL-------FNDCF--------- 223
++KL + +A V LI + C G V +A F + +N
Sbjct: 128 GLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQ 187
Query: 224 EEALNFFSQMRAVGFKPNNFTF-AFVLKAC-LGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
A FS M+ G +P +TF + V AC L +R+ + K+ DL+V
Sbjct: 188 RSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGS 247
Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF-VA 340
L+ + KSG +S AR++F +M ++ + + ++ + +A +LF M V+
Sbjct: 248 GLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVS 307
Query: 341 PNQFT-FVSVLQACATME--GLDLGNQIHSLVVRVGLLS-DVFVSNALMDVYAKCGRMEN 396
P + +S + E GL G ++H V+ GL+ V + N L+++YAKCG + +
Sbjct: 308 PESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIAD 367
Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
+ +F ++ V+WN+MI G Q G +A+ + M + T S L +CAS
Sbjct: 368 ARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCAS 427
Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
L + G Q+H ++K D++V V+NAL+ +YA+ G + + R +F M + ++VSWN++
Sbjct: 428 LKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSI 487
Query: 517 ISGYSMHGLS-AEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG-EAYFKSMVAN 574
I + S E + F Q+ G + N +TF VLSA S+ E G + + ++ N
Sbjct: 488 IGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNN 547
Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNV 629
E E+ ++++ G+ G +D K+ + + + W +++ IHN +
Sbjct: 548 IADEATTEN--ALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG-YIHNEL 599
Score = 123 bits (309), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 161/326 (49%), Gaps = 20/326 (6%)
Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
+S +Q+C G HS + + L DV++ N L++ Y + G ++ ++F E P
Sbjct: 7 LSFVQSCVGHRGA--ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL 64
Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP--GM 464
RN V+W ++ GY + GE +A++ M++E + + + + SVLRAC + ++ G
Sbjct: 65 RNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGR 124
Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKC-GSITDARLVFDMMNDWNEVSWNAMISGYSMH 523
Q+H L K +Y +D VV+N LI MY KC GS+ A F + N VSWN++IS YS
Sbjct: 125 QIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQA 184
Query: 524 GLSAEVLKVFDLMQQRGWRPNNLTFVG-VLSACS----NGGLLEQGEAYFKSMVANYGIE 578
G ++F MQ G RP TF V +ACS + LLEQ + G+
Sbjct: 185 GDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQ----IMCTIQKSGLL 240
Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL--SA 636
+ + +VS ++G L A K+ + + +V + ++G E +L
Sbjct: 241 TDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM 300
Query: 637 QHILDFEPEDEATHVLLSNI--YAMA 660
++D PE +LLS+ Y++A
Sbjct: 301 NSMIDVSPESYV--ILLSSFPEYSLA 324
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 499 bits (1285), Expect = e-140, Method: Compositional matrix adjust.
Identities = 288/797 (36%), Positives = 434/797 (54%), Gaps = 48/797 (6%)
Query: 55 NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLD-LFATNVLLNVYVKLNRLPDATKL 113
+++++ L++ D++ IH V K G +D + N L+N+Y K K+
Sbjct: 96 DNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKV 155
Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
FD + ERN +S+ + I ++ A+ F + E E + F + + ++
Sbjct: 156 FDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMP 215
Query: 174 E---LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------- 219
E + V A + G + N+F+ L+ + G + + KV G F
Sbjct: 216 EGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLA-SSKVLLGSFGGRDLVTWNTV 273
Query: 220 ------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT-C 272
N+ EAL + +M G +P+ FT + VL AC L+ +R K H ALK
Sbjct: 274 LSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGS 333
Query: 273 YEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFC 332
+ + +V AL+D+Y ++ + RR+F+ M + + W+ MIA Y+Q + +A+ LF
Sbjct: 334 LDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFI 393
Query: 333 RMRQ-AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC 391
M + A + N T V+ AC IH VV+ GL D FV N LMD+Y++
Sbjct: 394 GMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRL 453
Query: 392 GRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKM--LEEQV--------- 440
G+++ ++ +F + R+ VTWNTMI GYV A+++ KM LE +V
Sbjct: 454 GKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSL 513
Query: 441 PATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARL 500
+T ++L +CA+L+AL G ++H +K N DV V +AL+DMYAKCG + +R
Sbjct: 514 KPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRK 573
Query: 501 VFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGL 560
VFD + N ++WN +I Y MHG E + + +M +G +PN +TF+ V +ACS+ G+
Sbjct: 574 VFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGM 633
Query: 561 LEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQ-PSVMIWRAL 619
+++G F M +YG+EP +HY +V LLGRAG + +A +L+ +P W +L
Sbjct: 634 VDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSL 693
Query: 620 LGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS----------- 668
LGA IHNN+EIG ++AQ+++ EP + +VLL+NIY+ A W+KA
Sbjct: 694 LGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVR 753
Query: 669 KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVRED 728
KEPG SWIE+ VH F AGD+SH + G LE L + RK GY+PD S VL +V ED
Sbjct: 754 KEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEED 813
Query: 729 EKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDV 788
EKE L HSEKLA+AF + P + IR+ KNLR+C DCH A K ISKIV REII+RDV
Sbjct: 814 EKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDV 873
Query: 789 HRFHHFQDGCCSCGDFW 805
RFH F++G CSCGD+W
Sbjct: 874 RRFHRFKNGTCSCGDYW 890
Score = 187 bits (475), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 139/537 (25%), Positives = 253/537 (47%), Gaps = 36/537 (6%)
Query: 125 FVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVY 184
++ ++ S+ EAV + + G + + +AF A LK + + EL + A VY
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 185 KLGHDSNAF-VGTALIDAFSVCGCVEFARKVFDGLFN----------------DCFEEAL 227
K G+ ++ V L++ + CG KVFD + + +E AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 228 NFFSQMRAVGFKPNNFTFAFVLKACLGL---DTIRVAKSAHGCALKTCYEMDLYVAVALL 284
F M +P++FT V+ AC L + + + K H L+ E++ ++ L+
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLV 243
Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
+Y K G++++++ + +D++ W+ +++ Q + ++A+E M V P++F
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD-VFVSNALMDVYAKCGRMENSVELFAE 403
T SVL AC+ +E L G ++H+ ++ G L + FV +AL+D+Y C ++ + +F
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 363
Query: 404 SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ-VPATEVTYSSVLRACASLAALEP 462
R WN MI GY Q +A+++F M E + A T + V+ AC A
Sbjct: 364 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR 423
Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
+H VK D D V N L+DMY++ G I A +F M D + V+WN MI+GY
Sbjct: 424 KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVF 483
Query: 523 HGLSAEVLKVFDLMQ-----------QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSM 571
+ L + MQ + +PN++T + +L +C+ L +G+
Sbjct: 484 SEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYA 543
Query: 572 VANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
+ N + + +++V + + G L + K+ + IP Q +V+ W ++ A +H N
Sbjct: 544 IKN-NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 494 bits (1273), Expect = e-139, Method: Compositional matrix adjust.
Identities = 247/649 (38%), Positives = 392/649 (60%), Gaps = 30/649 (4%)
Query: 186 LGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNF 229
LG + F+ T LI A S G + FAR+VFD L N+ F++AL
Sbjct: 47 LGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLM 106
Query: 230 FSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK 289
+S M+ P++FTF +LKAC GL +++ + H + ++ D++V L+ LY K
Sbjct: 107 YSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAK 166
Query: 290 SGEISNARRIFE--EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFV 347
+ +AR +FE +P++ ++ W+ +++ YAQ ++A+E+F +MR+ V P+ V
Sbjct: 167 CRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALV 226
Query: 348 SVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKR 407
SVL A ++ L G IH+ VV++GL + + +L +YAKCG++ + LF +
Sbjct: 227 SVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSP 286
Query: 408 NHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVH 467
N + WN MI GY + G +A+ MF +M+ + V ++ +S + ACA + +LE ++
Sbjct: 287 NLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMY 346
Query: 468 CLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSA 527
+++Y DV +++ALIDM+AKCGS+ ARLVFD D + V W+AMI GY +HG +
Sbjct: 347 EYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAR 406
Query: 528 EVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSM 587
E + ++ M++ G PN++TF+G+L AC++ G++ +G +F M A++ I P +HY +
Sbjct: 407 EAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKINPQQQHYACV 465
Query: 588 VSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDE 647
+ LLGRAGHLD+A ++I+ +P QP V +W ALL AC H +VE+G +AQ + +P +
Sbjct: 466 IDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNT 525
Query: 648 ATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMN 696
+V LSN+YA AR W EK +K+ G SW+E +G + FR GD SH
Sbjct: 526 GHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYE 585
Query: 697 IIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPI 756
I +EW+ + ++ G++ + A L D+ ++E E L HSE++A+A+ L P +P+
Sbjct: 586 EIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPL 645
Query: 757 RIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
RI KNLR CV+CH A K+ISK+V REI++RD +RFHHF+DG CSCGD+W
Sbjct: 646 RITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 199 bits (506), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 204/369 (55%), Gaps = 6/369 (1%)
Query: 262 KSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQT 321
K H L + ++ L+ + G+I+ AR++F+++P+ + PW+ +I Y++
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 322 DLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVS 381
+ DA+ ++ M+ A V+P+ FTF +L+AC+ + L +G +H+ V R+G +DVFV
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 382 NALMDVYAKCGRMENSVELFA--ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ 439
N L+ +YAKC R+ ++ +F P+R V+W ++ Y Q GE +A+ +FS+M +
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 440 VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR 499
V V SVL A L L+ G +H VK +++ + +L MYAKCG + A+
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 500 LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGG 559
++FD M N + WNAMISGY+ +G + E + +F M + RP+ ++ +SAC+ G
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 560 LLEQGEAYFKSM-VANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRA 618
LEQ + ++ + ++Y + I ++++ + + G ++ A+L+ V++W A
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFIS--SALIDMFAKCGSVE-GARLVFDRTLDRDVVVWSA 394
Query: 619 LLGACIIHN 627
++ +H
Sbjct: 395 MIVGYGLHG 403
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 489 bits (1259), Expect = e-137, Method: Compositional matrix adjust.
Identities = 273/776 (35%), Positives = 416/776 (53%), Gaps = 31/776 (3%)
Query: 57 HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
H A L+ C +L+ + + V K G + F L++++ + + +A ++F+
Sbjct: 38 HPAALLLERCSSLKELRQILPL---VFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEP 94
Query: 117 MPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
+ + + + T ++G+ S +A+ F + + E + FT LKV +
Sbjct: 95 IDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVG 154
Query: 177 PCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FN 220
+ + K G + F T L + ++ C V ARKVFD + N
Sbjct: 155 KEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQN 214
Query: 221 DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVA 280
AL M KP+ T VL A L I V K HG A+++ ++ + ++
Sbjct: 215 GMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIS 274
Query: 281 VALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVA 340
AL+D+Y K G + AR++F+ M +++V+ W+ MI Y Q + +A+ +F +M V
Sbjct: 275 TALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVK 334
Query: 341 PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL 400
P + + L ACA + L+ G IH L V +GL +V V N+L+ +Y KC ++ + +
Sbjct: 335 PTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASM 394
Query: 401 FAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAAL 460
F + R V+WN MI+G+ Q G A+ FS+M V TY SV+ A A L+
Sbjct: 395 FGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSIT 454
Query: 461 EPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGY 520
+H + +++ D +V V AL+DMYAKCG+I ARL+FDMM++ + +WNAMI GY
Sbjct: 455 HHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGY 514
Query: 521 SMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPC 580
HG L++F+ MQ+ +PN +TF+ V+SACS+ GL+E G F M NY IE
Sbjct: 515 GTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELS 574
Query: 581 IEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHIL 640
++HY +MV LLGRAG L++A I +P +P+V ++ A+LGAC IH NV +A+ +
Sbjct: 575 MDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLF 634
Query: 641 DFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGD 689
+ P+D HVLL+NIY A WEK K PG S +E + VH F +G
Sbjct: 635 ELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGS 694
Query: 690 TSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFK 749
T+H D I LE L ++AGY+PD + VL V D KE+ L HSEKLA++F L
Sbjct: 695 TAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLN 753
Query: 750 MPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
+ I + KNLR+C DCH A K IS + REI++RD+ RFHHF++G CSCGD+W
Sbjct: 754 TTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 40.0 bits (92), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 15/151 (9%)
Query: 38 QCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLD--LFATN 95
Q + T P TF+ Y + + + + A IH V++ +CLD +F T
Sbjct: 428 QMRSRTVKPDTFT--------YVSVITAIAELSITHHAKWIHGVVMR--SCLDKNVFVTT 477
Query: 96 VLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHEL 155
L+++Y K + A +FD M ER+ ++ I GY A+ LF + + +
Sbjct: 478 ALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKG--TI 535
Query: 156 NPFAFTAFLKVLVSMGWAELCPCVFACVYKL 186
P T FL V+ + + L C Y +
Sbjct: 536 KPNGVT-FLSVISACSHSGLVEAGLKCFYMM 565
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 486 bits (1250), Expect = e-136, Method: Compositional matrix adjust.
Identities = 246/599 (41%), Positives = 373/599 (62%), Gaps = 16/599 (2%)
Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
N +EAL +M +G + + +L ACL +R + H +KT Y Y+
Sbjct: 33 NGRLQEAL---LEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYL 89
Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
LL Y K + +AR++ +EMP+K+V+ W+ MI+RY+QT S +A+ +F M ++
Sbjct: 90 RTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDG 149
Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
PN+FTF +VL +C GL LG QIH L+V+ S +FV ++L+D+YAK G+++ + E
Sbjct: 150 KPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEARE 209
Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
+F P+R+ V+ +I GY QLG +A+ MF ++ E + VTY+S+L A + LA
Sbjct: 210 IFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLAL 269
Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
L+ G Q HC ++ V+ N+LIDMY+KCG+++ AR +FD M + +SWNAM+ G
Sbjct: 270 LDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVG 329
Query: 520 YSMHGLSAEVLKVFDLMQ-QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN-YGI 577
YS HGL EVL++F LM+ ++ +P+ +T + VLS CS+G + + G F MVA YG
Sbjct: 330 YSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGT 389
Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQ 637
+P EHY +V +LGRAG +D+A + I+ +P +P+ + +LLGAC +H +V+IG +
Sbjct: 390 KPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGR 449
Query: 638 HILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFR 686
+++ EPE+ +V+LSN+YA A W +KA +KEPG SWI+++ +HYF
Sbjct: 450 RLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFH 509
Query: 687 AGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFA 746
A D +H + ++ +++K ++AGY+PDLS VL DV E++KE+ L HSEKLAL F
Sbjct: 510 ANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFG 569
Query: 747 LFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
L PIR+ KNLRICVDCH KI SK+ +RE+ +RD +RFH DG CSCGD+W
Sbjct: 570 LIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 166 bits (419), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 185/397 (46%), Gaps = 27/397 (6%)
Query: 36 TQQCSNSTTTPITFSVS----EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDL 91
+Q CSN ++ E H Y L +C+ L+ +H ++K
Sbjct: 28 SQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPAT 87
Query: 92 FATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHRE 151
+ LL Y K + L DA K+ DEMPE+N +S+ I Y+ + EA+ +F+ + R
Sbjct: 88 YLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRS 147
Query: 152 GHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFA 211
+ N F F L + L + + K +DS+ FVG++L+D ++ G ++ A
Sbjct: 148 DGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEA 207
Query: 212 RKVFDGLFN----DCF------------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGL 255
R++F+ L C EEAL F ++ + G PN T+A +L A GL
Sbjct: 208 REIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGL 267
Query: 256 DTIRVAKSAHGCALKTCYEMDLYVAV--ALLDLYTKSGEISNARRIFEEMPKKDVIPWSF 313
+ K AH L+ E+ Y + +L+D+Y+K G +S ARR+F+ MP++ I W+
Sbjct: 268 ALLDHGKQAHCHVLRR--ELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNA 325
Query: 314 MIARYAQTDLSIDAVELFCRMR-QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVV-- 370
M+ Y++ L + +ELF MR + V P+ T ++VL C+ D G I +V
Sbjct: 326 MLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAG 385
Query: 371 RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKR 407
G ++D+ + GR++ + E P +
Sbjct: 386 EYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 422
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 485 bits (1248), Expect = e-136, Method: Compositional matrix adjust.
Identities = 267/745 (35%), Positives = 404/745 (54%), Gaps = 32/745 (4%)
Query: 93 ATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREG 152
+TN +++ +VK + A LFD MP+R +++ + Y +S F EA LF + R
Sbjct: 81 STNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSS 140
Query: 153 HELNP--FAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVC----- 205
P FT L V A KLG D+N F+ + + S C
Sbjct: 141 SCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRL 200
Query: 206 --GCVEFAR------KVFDGLF-----NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKAC 252
CV F F+ L + + E+++ F +MR G +P++FTF+ VLKA
Sbjct: 201 DLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV 260
Query: 253 LGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWS 312
+GL + + H ++ T + D V +LD Y+K + R +F+EMP+ D + ++
Sbjct: 261 VGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYN 320
Query: 313 FMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV 372
+I+ Y+Q D ++ F M+ F F ++L A + L +G Q+H +
Sbjct: 321 VVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLA 380
Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMF 432
S + V N+L+D+YAKC E + +F P+R V+W +I GYVQ G G + +F
Sbjct: 381 TADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLF 440
Query: 433 SKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKC 492
+KM + A + T+++VL+A AS A+L G Q+H +++ +V + L+DMYAKC
Sbjct: 441 TKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKC 500
Query: 493 GSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL 552
GSI DA VF+ M D N VSWNA+IS ++ +G + F M + G +P++++ +GVL
Sbjct: 501 GSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVL 560
Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
+ACS+ G +EQG YF++M YGI P +HY M+ LLGR G +A KL++ +PF+P
Sbjct: 561 TACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPD 620
Query: 613 VMIWRALLGACIIHNNVEIGRLSAQHILDFEP-EDEATHVLLSNIYAMARSWEK------ 665
++W ++L AC IH N + +A+ + E D A +V +SNIYA A WEK
Sbjct: 621 EIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKK 680
Query: 666 -----AASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSA 720
K P SW+E +H F + D +H + + I + L + + GY PD S+
Sbjct: 681 AMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSS 740
Query: 721 VLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQ 780
V++DV E K L HSE+LA+AFAL P PI ++KNLR C DCH AIK+ISKIV+
Sbjct: 741 VVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVK 800
Query: 781 REIIIRDVHRFHHFQDGCCSCGDFW 805
REI +RD RFHHF +G CSCGD+W
Sbjct: 801 REITVRDTSRFHHFSEGVCSCGDYW 825
Score = 231 bits (588), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 142/492 (28%), Positives = 253/492 (51%), Gaps = 32/492 (6%)
Query: 58 SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFAT--NVLLNVYVKLNRLPDATKLFD 115
++ T L C +H +K G + F T NVLL Y ++ RL A LF+
Sbjct: 149 TFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFE 208
Query: 116 EMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAEL 175
E+PE+++++F T I GY + E++ LF + + GH+ + F F+ LK +V + L
Sbjct: 209 EIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFAL 268
Query: 176 CPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FN-------- 220
+ A G +A VG ++D +S V R +FD + +N
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ 328
Query: 221 -DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
D +E +L+FF +M+ +GF NF FA +L L ++++ + H AL + L+V
Sbjct: 329 ADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHV 388
Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
+L+D+Y K A IF+ +P++ + W+ +I+ Y Q L ++LF +MR + +
Sbjct: 389 GNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNL 448
Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
+Q TF +VL+A A+ L LG Q+H+ ++R G L +VF + L+D+YAKCG ++++V+
Sbjct: 449 RADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQ 508
Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
+F E P RN V+WN +I + G+ A+ F+KM+E + V+ VL AC+
Sbjct: 509 VFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGF 568
Query: 460 LEPGMQ-------VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN-DWNEV 511
+E G + ++ +T K + ++D+ + G +A + D M + +E+
Sbjct: 569 VEQGTEYFQAMSPIYGITPKKKH------YACMLDLLGRNGRFAEAEKLMDEMPFEPDEI 622
Query: 512 SWNAMISGYSMH 523
W+++++ +H
Sbjct: 623 MWSSVLNACRIH 634
Score = 149 bits (376), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 196/406 (48%), Gaps = 43/406 (10%)
Query: 255 LDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD------- 307
LDT RV +KT ++ D + +++ + G++S AR++++EMP K+
Sbjct: 30 LDTRRVDARI----IKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTM 85
Query: 308 ------------------------VIPWSFMIARYAQTDLSIDAVELFCRM--RQAFVAP 341
V+ W+ ++ YA+ +A +LF +M + P
Sbjct: 86 ISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLP 145
Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVF--VSNALMDVYAKCGRMENSVE 399
+ TF ++L C + Q+H+ V++G ++ F VSN L+ Y + R++ +
Sbjct: 146 DHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACV 205
Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
LF E P+++ VT+NT+I GY + G +++ +F KM + ++ T+S VL+A L
Sbjct: 206 LFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHD 265
Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
G Q+H L+V + D V N ++D Y+K + + R++FD M + + VS+N +IS
Sbjct: 266 FALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISS 325
Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG-EAYFKSMVANYGIE 578
YS L F MQ G+ N F +LS +N L+ G + + ++++A +
Sbjct: 326 YSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLAT--AD 383
Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACI 624
+ S+V + + ++A + + +P Q + + W AL+ +
Sbjct: 384 SILHVGNSLVDMYAKCEMFEEAELIFKSLP-QRTTVSWTALISGYV 428
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 479 bits (1233), Expect = e-134, Method: Compositional matrix adjust.
Identities = 273/797 (34%), Positives = 443/797 (55%), Gaps = 45/797 (5%)
Query: 51 VSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDA 110
+ +S ++++ L+SCI+ D + +H ++++ D N L+++Y K A
Sbjct: 57 IRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKA 116
Query: 111 TKLFDEM---PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVL 167
+F+ M +R+ +S+ + Y + + ++A+ +F G N + +TA ++
Sbjct: 117 EDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRAC 176
Query: 168 VSMGWAELCPCVFACVYKLGH-DSNAFVGTALIDAFSVCG--CVEFARKVFDGL------ 218
+ + + + K GH +S+ VG +LID F V G E A KVFD +
Sbjct: 177 SNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMF-VKGENSFENAYKVFDKMSELNVV 235
Query: 219 -----FNDCFE-----EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCA 268
C + EA+ FF M GF+ + FT + V AC L+ + + K H A
Sbjct: 236 TWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWA 295
Query: 269 LKTCYEMDLYVAVALLDLYTK---SGEISNARRIFEEMPKKDVIPWSFMIARYAQT-DLS 324
+++ D V +L+D+Y K G + + R++F+ M V+ W+ +I Y + +L+
Sbjct: 296 IRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLA 353
Query: 325 IDAVELFCRM-RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNA 383
+A+ LF M Q V PN FTF S +AC + +G Q+ + GL S+ V+N+
Sbjct: 354 TEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANS 413
Query: 384 LMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPAT 443
++ ++ K RME++ F ++N V++NT + G + +A + S++ E ++ +
Sbjct: 414 VISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVS 473
Query: 444 EVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFD 503
T++S+L A++ ++ G Q+H VK + V NALI MY+KCGSI A VF+
Sbjct: 474 AFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFN 533
Query: 504 MMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQ 563
M + N +SW +MI+G++ HG + VL+ F+ M + G +PN +T+V +LSACS+ GL+ +
Sbjct: 534 FMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSE 593
Query: 564 GEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGAC 623
G +F SM ++ I+P +EHY MV LL RAG L A + I +PFQ V++WR LGAC
Sbjct: 594 GWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGAC 653
Query: 624 IIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPG 672
+H+N E+G+L+A+ IL+ +P + A ++ LSNIYA A WE++ KE G
Sbjct: 654 RVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGG 713
Query: 673 LSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDV----RED 728
SWIE +H F GDT+H + + I L+ L + ++ GY+PD VL + E
Sbjct: 714 CSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEA 773
Query: 729 EKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDV 788
EKER L+ HSEK+A+AF L S P+R+ KNLR+C DCH A+K IS + REI++RD+
Sbjct: 774 EKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDL 833
Query: 789 HRFHHFQDGCCSCGDFW 805
+RFHHF+DG CSC D+W
Sbjct: 834 NRFHHFKDGKCSCNDYW 850
Score = 87.0 bits (214), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 138/313 (44%), Gaps = 31/313 (9%)
Query: 23 AWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQV 82
A + G L+T+ N + IT E N +++++ ++C D + + Q
Sbjct: 341 ALITGYMKNCNLATEAI-NLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQA 399
Query: 83 LKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAV 142
K+G + N +++++VK +R+ DA + F+ + E+N +S+ T + G + F +A
Sbjct: 400 FKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAF 459
Query: 143 GLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAF 202
L S + ++ F F + L + ++G + + V KLG N V ALI +
Sbjct: 460 KLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMY 519
Query: 203 SVCGCVEFARKVFD---------------GLFNDCFE-EALNFFSQMRAVGFKPNNFTFA 246
S CG ++ A +VF+ G F L F+QM G KPN T+
Sbjct: 520 SKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYV 579
Query: 247 FVLKACLGLDTIRVAKSAHGCALKTCYE-------MDLYVAVALLDLYTKSGEISNARRI 299
+L AC + + S + YE M+ Y ++DL ++G +++A
Sbjct: 580 AILSACSHVGLV----SEGWRHFNSMYEDHKIKPKMEHY--ACMVDLLCRAGLLTDAFEF 633
Query: 300 FEEMP-KKDVIPW 311
MP + DV+ W
Sbjct: 634 INTMPFQADVLVW 646
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 478 bits (1231), Expect = e-134, Method: Compositional matrix adjust.
Identities = 265/781 (33%), Positives = 416/781 (53%), Gaps = 28/781 (3%)
Query: 53 EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
+ + + + LQ C + L+ + + G +D + L +Y L +A++
Sbjct: 91 DIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASR 150
Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
+FDE+ + + + S F ++GLF + G E++ + F+ K S+
Sbjct: 151 VFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRS 210
Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF------------- 219
+ + K G VG +L+ + V+ ARKVFD +
Sbjct: 211 VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 270
Query: 220 ---NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMD 276
N E+ L+ F QM G + + T V C I + ++ H +K C+ +
Sbjct: 271 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 330
Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
LLD+Y+K G++ +A+ +F EM + V+ ++ MIA YA+ L+ +AV+LF M +
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390
Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
++P+ +T +VL CA LD G ++H + L D+FVSNALMD+YAKCG M+
Sbjct: 391 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQE 450
Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ-VPATEVTYSSVLRACA 455
+ +F+E ++ ++WNT+I GY + +A+ +F+ +LEE+ E T + VL ACA
Sbjct: 451 AELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACA 510
Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
SL+A + G ++H ++ Y D VAN+L+DMYAKCG++ A ++FD + + VSW
Sbjct: 511 SLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTV 570
Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
MI+GY MHG E + +F+ M+Q G + ++FV +L ACS+ GL+++G +F M
Sbjct: 571 MIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHEC 630
Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS 635
IEP +EHY +V +L R G L KA + IE +P P IW ALL C IH++V++
Sbjct: 631 KIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKV 690
Query: 636 AQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHY 684
A+ + + EPE+ +VL++NIYA A WE + K PG SWIE +G V+
Sbjct: 691 AEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNI 750
Query: 685 FRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALA 744
F AGD+S+ + I L + + + GY P L D E EKE L HSEKLA+A
Sbjct: 751 FVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMA 810
Query: 745 FALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDF 804
+ IR+ KNLR+C DCH K +SK+ +REI++RD +RFH F+DG CSC F
Sbjct: 811 LGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGF 870
Query: 805 W 805
W
Sbjct: 871 W 871
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 475 bits (1223), Expect = e-133, Method: Compositional matrix adjust.
Identities = 240/630 (38%), Positives = 368/630 (58%), Gaps = 47/630 (7%)
Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
F +AL F +MRA G P++ F VLK+C + +R +S HG ++ + DLY A
Sbjct: 86 FSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNA 145
Query: 283 LLDLYTK-----------------------SGE-------------ISNARRIFEEMPKK 306
L+++Y K SG+ I + RR+FE MP+K
Sbjct: 146 LMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRK 205
Query: 307 DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIH 366
DV+ ++ +IA YAQ+ + DA+ + M + P+ FT SVL + + G +IH
Sbjct: 206 DVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIH 265
Query: 367 SLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVG 426
V+R G+ SDV++ ++L+D+YAK R+E+S +F+ R+ ++WN+++ GYVQ G
Sbjct: 266 GYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYN 325
Query: 427 KAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALI 486
+A+ +F +M+ +V V +SSV+ ACA LA L G Q+H ++ + ++ +A+AL+
Sbjct: 326 EALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALV 385
Query: 487 DMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNL 546
DMY+KCG+I AR +FD MN +EVSW A+I G+++HG E + +F+ M+++G +PN +
Sbjct: 386 DMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQV 445
Query: 547 TFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEG 606
FV VL+ACS+ GL+++ YF SM YG+ +EHY ++ LLGRAG L++A I
Sbjct: 446 AFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISK 505
Query: 607 IPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKA 666
+ +P+ +W LL +C +H N+E+ A+ I + E+ +VL+ N+YA W++
Sbjct: 506 MCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEM 565
Query: 667 AS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYI 715
A K+P SWIE + H F +GD SH M+ I L+ + + K GY+
Sbjct: 566 AKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYV 625
Query: 716 PDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKII 775
D S VL DV E+ K L+ HSE+LA+AF + P + IR+ KN+RIC DCH AIK I
Sbjct: 626 ADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFI 685
Query: 776 SKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
SKI +REII+RD RFHHF G CSCGD+W
Sbjct: 686 SKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 150 bits (378), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 183/398 (45%), Gaps = 53/398 (13%)
Query: 59 YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKL-------------N 105
+ + L+SC DL+ ++H +++ G DL+ N L+N+Y KL +
Sbjct: 108 FPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFD 167
Query: 106 RLPDAT-----------------------KLFDEMPERNTISFVTTIQGYTVSSQFVEAV 142
+P T ++F+ MP ++ +S+ T I GY S + +A+
Sbjct: 168 EMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDAL 227
Query: 143 GLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAF 202
+ + + + F ++ L + + V + G DS+ ++G++L+D +
Sbjct: 228 RMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMY 287
Query: 203 SVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRAVGFKPNNFTFA 246
+ +E + +VF L+ N + EAL F QM KP F+
Sbjct: 288 AKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFS 347
Query: 247 FVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK 306
V+ AC L T+ + K HG L+ + ++++A AL+D+Y+K G I AR+IF+ M
Sbjct: 348 SVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVL 407
Query: 307 DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLG-NQI 365
D + W+ +I +A +AV LF M++ V PNQ FV+VL AC+ + +D
Sbjct: 408 DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYF 467
Query: 366 HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE 403
+S+ GL ++ A+ D+ + G++E + ++
Sbjct: 468 NSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISK 505
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 173/385 (44%), Gaps = 38/385 (9%)
Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
A ++ +YT + A +F+ + V+ W +I + L A+ F MR +
Sbjct: 42 ASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGR 101
Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC-------- 391
P+ F SVL++C M L G +H +VR+G+ D++ NALM++YAK
Sbjct: 102 CPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKIS 161
Query: 392 ---------GRMENSVE-------------------LFAESPKRNHVTWNTMIVGYVQLG 423
R NS + +F P+++ V++NT+I GY Q G
Sbjct: 162 VGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSG 221
Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN 483
A+ M +M + T SSVL + + G ++H ++ D DV + +
Sbjct: 222 MYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGS 281
Query: 484 ALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRP 543
+L+DMYAK I D+ VF + + +SWN++++GY +G E L++F M +P
Sbjct: 282 SLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKP 341
Query: 544 NNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKL 603
+ F V+ AC++ L G+ V G I +++V + + G++ A K+
Sbjct: 342 GAVAFSSVIPACAHLATLHLGKQ-LHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKI 400
Query: 604 IEGIPFQPSVMIWRALLGACIIHNN 628
+ + V W A++ +H +
Sbjct: 401 FDRMNVLDEVS-WTAIIMGHALHGH 424
Score = 96.3 bits (238), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 125/268 (46%), Gaps = 26/268 (9%)
Query: 71 DLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQ 130
D+ IH V++KG D++ + L+++Y K R+ D+ ++F + R+ IS+ + +
Sbjct: 257 DVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVA 316
Query: 131 GYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDS 190
GY + ++ EA+ LF + + AF++ + + L + V + G S
Sbjct: 317 GYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGS 376
Query: 191 NAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMR 234
N F+ +AL+D +S CG ++ ARK+FD + + EA++ F +M+
Sbjct: 377 NIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMK 436
Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC---YEMDLYVAVALLDLYTKSG 291
G KPN F VL AC + + A K E++ Y AVA DL ++G
Sbjct: 437 RQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVA--DLLGRAG 494
Query: 292 EISNARRIFEEM---PKKDVIPWSFMIA 316
++ A +M P V WS +++
Sbjct: 495 KLEEAYNFISKMCVEPTGSV--WSTLLS 520
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 121/298 (40%), Gaps = 39/298 (13%)
Query: 363 NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQL 422
Q+H+ +R LS S ++ +Y + ++ LF + W ++I +
Sbjct: 25 KQLHAQFIRTQSLSHTSAS-IVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQ 83
Query: 423 GEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVA 482
KA+ F +M + SVL++C + L G VH V+ D D+
Sbjct: 84 SLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTG 143
Query: 483 NALIDMYAK---------CGSITD---------------------------ARLVFDMMN 506
NAL++MYAK G++ D R VF++M
Sbjct: 144 NALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMP 203
Query: 507 DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEA 566
+ VS+N +I+GY+ G+ + L++ M +P++ T VL S + +G+
Sbjct: 204 RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKE 263
Query: 567 YFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACI 624
V GI+ + +S+V + ++ ++ + ++ + + + W +L+ +
Sbjct: 264 -IHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGIS-WNSLVAGYV 319
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 104/252 (41%), Gaps = 24/252 (9%)
Query: 58 SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
++++ + +C L +H VL+ G ++F + L+++Y K + A K+FD M
Sbjct: 345 AFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM 404
Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
+ +S+ I G+ + EAV LF + R+G + N AF A L +G +
Sbjct: 405 NVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAW 464
Query: 178 CVFAC---VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMR 234
F VY L + + A+ D G + EEA NF S+M
Sbjct: 465 GYFNSMTKVYGLNQELEHY--AAVADLLGRAGKL---------------EEAYNFISKM- 506
Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
+P ++ +L +C + +A+ + T ++ V + ++Y +G
Sbjct: 507 --CVEPTGSVWSTLLSSCSVHKNLELAEKV-AEKIFTVDSENMGAYVLMCNMYASNGRWK 563
Query: 295 NARRIFEEMPKK 306
++ M KK
Sbjct: 564 EMAKLRLRMRKK 575
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 466 bits (1199), Expect = e-130, Method: Compositional matrix adjust.
Identities = 228/569 (40%), Positives = 343/569 (60%), Gaps = 12/569 (2%)
Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
+LK C + + H L++ + D+ + LL++Y K G + AR++FE+MP++D
Sbjct: 66 LLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRD 125
Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
+ W+ +I+ Y+Q D DA+ F +M + +PN+FT SV++A A G+Q+H
Sbjct: 126 FVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHG 185
Query: 368 LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK 427
V+ G S+V V +AL+D+Y + G M+++ +F RN V+WN +I G+ + K
Sbjct: 186 FCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEK 245
Query: 428 AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALID 487
A+ +F ML + + +Y+S+ AC+S LE G VH +K+ + N L+D
Sbjct: 246 ALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLD 305
Query: 488 MYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLT 547
MYAK GSI DAR +FD + + VSWN++++ Y+ HG E + F+ M++ G RPN ++
Sbjct: 306 MYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEIS 365
Query: 548 FVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGI 607
F+ VL+ACS+ GLL++G Y++ M + GI P HY ++V LLGRAG L++A + IE +
Sbjct: 366 FLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEM 424
Query: 608 PFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA 667
P +P+ IW+ALL AC +H N E+G +A+H+ + +P+D HV+L NIYA W AA
Sbjct: 425 PIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAA 484
Query: 668 -----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIP 716
KEP SW+E + +H F A D H I E + K ++ GY+P
Sbjct: 485 RVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVP 544
Query: 717 DLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIIS 776
D S V+ V + E+E L HSEK+ALAFAL PP S I I KN+R+C DCHTAIK+ S
Sbjct: 545 DTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLAS 604
Query: 777 KIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
K+V REII+RD +RFHHF+DG CSC D+W
Sbjct: 605 KVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 180 bits (457), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 184/363 (50%), Gaps = 16/363 (4%)
Query: 59 YATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP 118
Y T L+ C L +H +L+ D+ N LLN+Y K L +A K+F++MP
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
+R+ +++ T I GY+ + +A+ F+ + R G+ N F ++ +K +
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL--FNDC-------------- 222
+ K G DSN VG+AL+D ++ G ++ A+ VFD L ND
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242
Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
E+AL F M GF+P++F++A + AC + K H +K+ ++ +
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 302
Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
LLD+Y KSG I +AR+IF+ + K+DV+ W+ ++ YAQ +AV F MR+ + PN
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPN 362
Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
+ +F+SVL AC+ LD G + L+ + G++ + + ++D+ + G + ++
Sbjct: 363 EISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIE 422
Query: 403 ESP 405
E P
Sbjct: 423 EMP 425
Score = 167 bits (422), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 168/293 (57%), Gaps = 2/293 (0%)
Query: 334 MRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
+ +++ ++ + ++L+ C + L G +H+ +++ D+ + N L+++YAKCG
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110
Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
+E + ++F + P+R+ VTW T+I GY Q A++ F++ML E T SSV++A
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170
Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
A+ G Q+H VK +D +V V +AL+D+Y + G + DA+LVFD + N+VSW
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 230
Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVA 573
NA+I+G++ + + L++F M + G+RP++ ++ + ACS+ G LEQG+ M+
Sbjct: 231 NALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK 290
Query: 574 NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH 626
+ G + +++ + ++G + A K+ + + + V+ W +LL A H
Sbjct: 291 S-GEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQH 341
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 107/265 (40%), Gaps = 32/265 (12%)
Query: 49 FSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLP 108
F S F SYA+ +C L+ +H ++K G L FA N LL++Y K +
Sbjct: 258 FRPSHF---SYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIH 314
Query: 109 DATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLV 168
DA K+FD + +R+ +S+ + + Y EAV F + R G N +F + L
Sbjct: 315 DARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACS 374
Query: 169 SMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALN 228
G + + + K G A+ ++D G + AL
Sbjct: 375 HSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDL---------------NRALR 419
Query: 229 FFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAH--GCALKTCYEM---DLYVAVAL 283
F +M +P + +L AC R+ K+ A + +E+ D V L
Sbjct: 420 FIEEM---PIEPTAAIWKALLNAC------RMHKNTELGAYAAEHVFELDPDDPGPHVIL 470
Query: 284 LDLYTKSGEISNARRIFEEMPKKDV 308
++Y G ++A R+ ++M + V
Sbjct: 471 YNIYASGGRWNDAARVRKKMKESGV 495
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 465 bits (1196), Expect = e-130, Method: Compositional matrix adjust.
Identities = 281/805 (34%), Positives = 412/805 (51%), Gaps = 78/805 (9%)
Query: 78 IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMP--ERNTISFVTTIQGYTVS 135
IH ++L G L L T+ L++ Y+ + L A L P + + + I+ Y +
Sbjct: 47 IHQKLLSFG-ILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDN 105
Query: 136 SQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVG 195
+ + LF +H + + F K + A G SN FVG
Sbjct: 106 GCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVG 165
Query: 196 TALIDAFSVCGCVEFARKVFDGL-------FNDCFEE---------ALNFFSQM-RAVGF 238
AL+ +S C + ARKVFD + +N E AL FS+M G
Sbjct: 166 NALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGC 225
Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
+P+N T VL C L T + K H A+ + +++V L+D+Y K G + A
Sbjct: 226 RPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANT 285
Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ---------------------- 336
+F M KDV+ W+ M+A Y+Q DAV LF +M++
Sbjct: 286 VFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGL 345
Query: 337 -------------AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV-------GLLS 376
+ + PN+ T +SVL CA++ L G +IH ++ G
Sbjct: 346 GYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGD 405
Query: 377 DVFVSNALMDVYAKCGRMENSVELFAE-SPK-RNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
+ V N L+D+YAKC +++ + +F SPK R+ VTW MI GY Q G+ KA+ + S+
Sbjct: 406 ENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSE 465
Query: 435 MLEE--QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYD-MDVVVANALIDMYAK 491
M EE Q T S L ACASLAAL G Q+H ++ + + + V+N LIDMYAK
Sbjct: 466 MFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAK 525
Query: 492 CGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGV 551
CGSI+DARLVFD M NEV+W ++++GY MHG E L +FD M++ G++ + +T + V
Sbjct: 526 CGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVV 585
Query: 552 LSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQP 611
L ACS+ G+++QG YF M +G+ P EHY +V LLGRAG L+ A +LIE +P +P
Sbjct: 586 LYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEP 645
Query: 612 SVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE------- 664
++W A L C IH VE+G +A+ I + + ++ LLSN+YA A W+
Sbjct: 646 PPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRS 705
Query: 665 ----KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSA 720
K K PG SW+E F GD +H I +L + + GY+P+
Sbjct: 706 LMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGF 765
Query: 721 VLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQ 780
L DV ++EK+ L+ HSEKLALA+ + P + IRI KNLR+C DCHTA +S+I+
Sbjct: 766 ALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIID 825
Query: 781 REIIIRDVHRFHHFQDGCCSCGDFW 805
+II+RD RFHHF++G CSC +W
Sbjct: 826 HDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 143/539 (26%), Positives = 234/539 (43%), Gaps = 72/539 (13%)
Query: 55 NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
+++++ ++C + ++ + H L G ++F N L+ +Y + L DA K+F
Sbjct: 126 DNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVF 185
Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHRE-GHELNPFAFTAFLKVLVSMGWA 173
DEM + +S+ + I+ Y + A+ +FS + E G + L S+G
Sbjct: 186 DEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTH 245
Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD----------------- 216
L + N FVG L+D ++ CG ++ A VF
Sbjct: 246 SLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGY 305
Query: 217 ---GLFNDC---FE----------------------------EALNFFSQMRAVGFKPNN 242
G F D FE EAL QM + G KPN
Sbjct: 306 SQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNE 365
Query: 243 FTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL---------YVAVALLDLYTKSGEI 293
T VL C + + K H A+K Y +DL V L+D+Y K ++
Sbjct: 366 VTLISVLSGCASVGALMHGKEIHCYAIK--YPIDLRKNGHGDENMVINQLIDMYAKCKKV 423
Query: 294 SNARRIFEEM-PK-KDVIPWSFMIARYAQTDLSIDAVELFCRM--RQAFVAPNQFTFVSV 349
AR +F+ + PK +DV+ W+ MI Y+Q + A+EL M PN FT
Sbjct: 424 DTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCA 483
Query: 350 LQACATMEGLDLGNQIHSLVVRVGLLS-DVFVSNALMDVYAKCGRMENSVELFAESPKRN 408
L ACA++ L +G QIH+ +R + +FVSN L+D+YAKCG + ++ +F +N
Sbjct: 484 LVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKN 543
Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHC 468
VTW +++ GY G +A+ +F +M VT VL AC+ ++ GM+ +
Sbjct: 544 EVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME-YF 602
Query: 469 LTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHG 524
+K + + + L+D+ + G + A RL+ +M + V W A +S +HG
Sbjct: 603 NRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHG 661
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 464 bits (1194), Expect = e-129, Method: Compositional matrix adjust.
Identities = 254/702 (36%), Positives = 385/702 (54%), Gaps = 29/702 (4%)
Query: 132 YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSN 191
Y S Q+ + F+ + E + F L V + L V KLG D
Sbjct: 290 YLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLM 349
Query: 192 AFVGTALIDAFSVCGCVEFARKVFD---------------GLFNDCFE-EALNFFSQMRA 235
V +LI+ + FAR VFD G+ + E EA+ F Q+
Sbjct: 350 LTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR 409
Query: 236 VGFKPNNFTFAFVLKACLGL-DTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
G KP+ +T VLKA L + + ++K H A+K D +V+ AL+D Y+++ +
Sbjct: 410 CGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMK 469
Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
A +FE D++ W+ M+A Y Q+ ++LF M + + FT +V + C
Sbjct: 470 EAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCG 528
Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
+ ++ G Q+H+ ++ G D++VS+ ++D+Y KCG M + F P + V W T
Sbjct: 529 FLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTT 588
Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
MI G ++ GE +A +FS+M V E T +++ +A + L ALE G Q+H +K N
Sbjct: 589 MISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLN 648
Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
D V +L+DMYAKCGSI DA +F + N +WNAM+ G + HG E L++F
Sbjct: 649 CTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFK 708
Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
M+ G +P+ +TF+GVLSACS+ GL+ + + +SM +YGI+P IEHY+ + LGRA
Sbjct: 709 QMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRA 768
Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLS 654
G + +A LIE + + S ++R LL AC + + E G+ A +L+ EP D + +VLLS
Sbjct: 769 GLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLS 828
Query: 655 NIYAMARSWEK-----------AASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLE 703
N+YA A W++ K+PG SWIE + +H F D S+ +I ++
Sbjct: 829 NMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVK 888
Query: 704 WLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLR 763
+ ++ GY+P+ L DV E+EKER L+ HSEKLA+AF L PPS+PIR+IKNLR
Sbjct: 889 DMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLR 948
Query: 764 ICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
+C DCH A+K I+K+ REI++RD +RFH F+DG CSCGD+W
Sbjct: 949 VCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 238 bits (608), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 161/563 (28%), Positives = 282/563 (50%), Gaps = 28/563 (4%)
Query: 63 LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
L+ C+ + + + + H K G D F L+N+Y+K ++ + LF+EMP R+
Sbjct: 152 LKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDV 211
Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
+ + ++ Y EA+ L S H G LNP T L +S
Sbjct: 212 VLWNLMLKAYLEMGFKEEAIDLSSAFHSSG--LNPNEITLRLLARIS------------- 256
Query: 183 VYKLGHDSNAFVGTALI---DAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFK 239
G DS+A + DA SV + + + + L + + L F+ M +
Sbjct: 257 ----GDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVE 312
Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRI 299
+ TF +L + +D++ + + H ALK ++ L V+ +L+++Y K + AR +
Sbjct: 313 CDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTV 372
Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM-EG 358
F+ M ++D+I W+ +IA AQ L ++AV LF ++ + + P+Q+T SVL+A +++ EG
Sbjct: 373 FDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEG 432
Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
L L Q+H +++ +SD FVS AL+D Y++ R E+ E + V WN M+ G
Sbjct: 433 LSLSKQVHVHAIKINNVSDSFVSTALIDAYSR-NRCMKEAEILFERHNFDLVAWNAMMAG 491
Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
Y Q + K + +F+ M ++ + + T ++V + C L A+ G QVH +K+ YD+D
Sbjct: 492 YTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLD 551
Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
+ V++ ++DMY KCG ++ A+ FD + ++V+W MISG +G VF M+
Sbjct: 552 LWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRL 611
Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQG-EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHL 597
G P+ T + A S LEQG + + ++ N +P + TS+V + + G +
Sbjct: 612 MGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVG--TSLVDMYAKCGSI 669
Query: 598 DKAAKLIEGIPFQPSVMIWRALL 620
D A L + I ++ W A+L
Sbjct: 670 DDAYCLFKRIEMM-NITAWNAML 691
Score = 213 bits (543), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 142/462 (30%), Positives = 234/462 (50%), Gaps = 19/462 (4%)
Query: 63 LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
L + ++ D L +HC LK G L L +N L+N+Y KL + A +FD M ER+
Sbjct: 322 LATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDL 381
Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA-ELCPCVFA 181
IS+ + I G + VEAV LF L R G + + + T+ LK S+ L V
Sbjct: 382 ISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHV 441
Query: 182 CVYKLGHDSNAFVGTALIDAFSVCGCVE-----FARKVFDGLFNDCF----------EEA 226
K+ + S++FV TALIDA+S C++ F R FD + + +
Sbjct: 442 HAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFDLVAWNAMMAGYTQSHDGHKT 501
Query: 227 LNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDL 286
L F+ M G + ++FT A V K C L I K H A+K+ Y++DL+V+ +LD+
Sbjct: 502 LKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDM 561
Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
Y K G++S A+ F+ +P D + W+ MI+ + A +F +MR V P++FT
Sbjct: 562 YVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTI 621
Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
++ +A + + L+ G QIH+ +++ +D FV +L+D+YAKCG ++++ LF
Sbjct: 622 ATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM 681
Query: 407 RNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV 466
N WN M+VG Q GE + + +F +M + +VT+ VL AC S + L
Sbjct: 682 MNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSAC-SHSGLVSEAYK 740
Query: 467 HCLTVKANYDM--DVVVANALIDMYAKCGSITDARLVFDMMN 506
H ++ +Y + ++ + L D + G + A + + M+
Sbjct: 741 HMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMS 782
Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 190/417 (45%), Gaps = 53/417 (12%)
Query: 162 AFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN- 220
FL+ ++ L C A + + F+ LI +S CG + +AR+VFD + +
Sbjct: 44 GFLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDR 103
Query: 221 ----------------DC----FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRV 260
+C ++A F +R + T + +LK CL +
Sbjct: 104 DLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWA 163
Query: 261 AKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQ 320
++S HG A K + D +VA AL+++Y K G++ + +FEEMP +DV+ W+ M+ Y +
Sbjct: 164 SESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLE 223
Query: 321 TDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFV 380
+A++L + + PN+ T L+ A + G D
Sbjct: 224 MGFKEEAIDLSSAFHSSGLNPNEIT----LRLLARISGDD-------------------- 259
Query: 381 SNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQV 440
+ G++++ S + N + Y+ G+ + F+ M+E V
Sbjct: 260 --------SDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDV 311
Query: 441 PATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARL 500
+VT+ +L + +L G QVHC+ +K D+ + V+N+LI+MY K AR
Sbjct: 312 ECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFART 371
Query: 501 VFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSN 557
VFD M++ + +SWN++I+G + +GL E + +F + + G +P+ T VL A S+
Sbjct: 372 VFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS 428
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 463 bits (1192), Expect = e-129, Method: Compositional matrix adjust.
Identities = 266/758 (35%), Positives = 401/758 (52%), Gaps = 36/758 (4%)
Query: 79 HCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQF 138
H Q++ G D+ L L + A +F + + F ++G++V+
Sbjct: 40 HAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESP 99
Query: 139 VEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE--LCPCVFACVYKLGHDSNAFVGT 196
++ +F+ L R+ +L P + T + + G+ + + G DS +G+
Sbjct: 100 HSSLSVFAHL-RKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGS 158
Query: 197 ALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQM-RAVGFK 239
++ + VE ARKVFD + N+ + E++ F + +
Sbjct: 159 NIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTR 218
Query: 240 PNNFTFAFVLKACLGLDTIRVAKSAHGCALKT-CYEMDLYVAVALLDLYTKSGEISNARR 298
+ T +L A L +R+ H A KT CY D YV + LY+K G+I
Sbjct: 219 LDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHD-YVLTGFISLYSKCGKIKMGSA 277
Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEG 358
+F E K D++ ++ MI Y + ++ LF + + T VS++
Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGH--- 334
Query: 359 LDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVG 418
L L IH ++ LS VS AL VY+K +E++ +LF ESP+++ +WN MI G
Sbjct: 335 LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISG 394
Query: 419 YVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMD 478
Y Q G A+ +F +M + + VT + +L ACA L AL G VH L +++
Sbjct: 395 YTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESS 454
Query: 479 VVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ 538
+ V+ ALI MYAKCGSI +AR +FD+M NEV+WN MISGY +HG E L +F M
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLN 514
Query: 539 RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLD 598
G P +TF+ VL ACS+ GL+++G+ F SM+ YG EP ++HY MV +LGRAGHL
Sbjct: 515 SGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQ 574
Query: 599 KAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYA 658
+A + IE + +P +W LLGAC IH + + R ++ + + +P++ HVLLSNI++
Sbjct: 575 RALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHS 634
Query: 659 MARSWEKAAS-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNM 707
R++ +AA+ K PG + IE H F +GD SH + I LE L
Sbjct: 635 ADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEG 694
Query: 708 KSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVD 767
K R+AGY P+ L DV E+E+E + VHSE+LA+AF L P + IRIIKNLR+C+D
Sbjct: 695 KMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLD 754
Query: 768 CHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
CHT K+ISKI +R I++RD +RFHHF+DG CSCGD+W
Sbjct: 755 CHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 202 bits (514), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 137/488 (28%), Positives = 235/488 (48%), Gaps = 22/488 (4%)
Query: 55 NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
NS +YA ++ + D + IH Q + G +L + ++ +Y K R+ DA K+F
Sbjct: 118 NSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVF 177
Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREG-HELNPFAFTAFLKVLVSMGWA 173
D MPE++TI + T I GY + +VE++ +F L E L+ L + +
Sbjct: 178 DRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQEL 237
Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL--------------- 218
L + + K G S+ +V T I +S CG ++ +F
Sbjct: 238 RLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGY 297
Query: 219 -FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL 277
N E +L+ F ++ G + + T ++ L I + HG LK+ +
Sbjct: 298 TSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIY---AIHGYCLKSNFLSHA 354
Query: 278 YVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQA 337
V+ AL +Y+K EI +AR++F+E P+K + W+ MI+ Y Q L+ DA+ LF M+++
Sbjct: 355 SVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKS 414
Query: 338 FVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
+PN T +L ACA + L LG +H LV S ++VS AL+ +YAKCG + +
Sbjct: 415 EFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEA 474
Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
LF K+N VTWNTMI GY G+ +A+ +F +ML + T VT+ VL AC+
Sbjct: 475 RRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHA 534
Query: 458 AALEPGMQV-HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN-DWNEVSWNA 515
++ G ++ + + + ++ V ++D+ + G + A + M+ + W
Sbjct: 535 GLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWET 594
Query: 516 MISGYSMH 523
++ +H
Sbjct: 595 LLGACRIH 602
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 462 bits (1188), Expect = e-129, Method: Compositional matrix adjust.
Identities = 273/778 (35%), Positives = 416/778 (53%), Gaps = 59/778 (7%)
Query: 55 NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
N HS + Q+ IQ QT + C G+ D+ NV ++ Y++ R +A ++F
Sbjct: 36 NFHSLKRATQTQIQKS--QTKPLLKC-----GDS-DIKEWNVAISSYMRTGRCNEALRVF 87
Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLV---SMG 171
MP +++S+ I GY + +F A LF + E + ++ +K V ++G
Sbjct: 88 KRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP----ERDLVSWNVMIKGYVRNRNLG 143
Query: 172 WA----ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL--FNDCFEE 225
A E+ P C + ++ ++ GCV+ AR VFD + ND
Sbjct: 144 KARELFEIMPERDVCSW-----------NTMLSGYAQNGCVDDARSVFDRMPEKNDVSWN 192
Query: 226 AL------NFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM-DLY 278
AL N + + FK +A V CL ++ K + D+
Sbjct: 193 ALLSAYVQNSKMEEACMLFKSRE-NWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVV 251
Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
++ Y +SG+I AR++F+E P +DV W+ M++ Y Q + +A ELF +M +
Sbjct: 252 SWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER- 310
Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
N+ ++ ++L E +++ ++ ++ +V N ++ YA+CG++ +
Sbjct: 311 ---NEVSWNAMLAGYVQGERMEMAKELFDVMP----CRNVSTWNTMITGYAQCGKISEAK 363
Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
LF + PKR+ V+W MI GY Q G +A+ +F +M E ++SS L CA +
Sbjct: 364 NLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVV 423
Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
ALE G Q+H VK Y+ V NAL+ MY KCGSI +A +F M + VSWN MI+
Sbjct: 424 ALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIA 483
Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
GYS HG L+ F+ M++ G +P++ T V VLSACS+ GL+++G YF +M +YG+
Sbjct: 484 GYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVM 543
Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
P +HY MV LLGRAG L+ A L++ +PF+P IW LLGA +H N E+ +A
Sbjct: 544 PNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADK 603
Query: 639 ILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRA 687
I EPE+ +VLLSN+YA + W +K K PG SWIE Q H F
Sbjct: 604 IFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSV 663
Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFAL 747
GD H + + I LE L+++ +KAGY+ S VL DV E+EKER + HSE+LA+A+ +
Sbjct: 664 GDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGI 723
Query: 748 FKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
++ PIR+IKNLR+C DCH AIK +++I R II+RD +RFHHF+DG CSCGD+W
Sbjct: 724 MRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 163 bits (413), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 137/555 (24%), Positives = 256/555 (46%), Gaps = 73/555 (13%)
Query: 19 SKINAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTI 78
S I W ++ + + T +C+ + + + ++S SY + ++N + + A +
Sbjct: 62 SDIKEW--NVAISSYMRTGRCNEALR--VFKRMPRWSSVSYNGMISGYLRNGEFELARKL 117
Query: 79 HCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQF 138
++ ++ DL + NV++ YV+ L A +LF+ MPER+ S+ T + GY +
Sbjct: 118 FDEMPER----DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCV 173
Query: 139 VEAVGLFSTLHREGHELNPFAFTAFLKVLVS--------------MGWAELC-PCVFACV 183
+A +F + E N ++ A L V WA + C+
Sbjct: 174 DDARSVFDRM----PEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGF 229
Query: 184 YKLGH--DSNAFVGT----------ALIDAFSVCGCVEFARKVFDG-------------- 217
K ++ F + +I ++ G ++ AR++FD
Sbjct: 230 VKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVS 289
Query: 218 --LFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
+ N EEA F +M + N ++ +L + + + +AK + C +
Sbjct: 290 GYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFD--VMPCRNV 343
Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
+ ++ Y + G+IS A+ +F++MPK+D + W+ MIA Y+Q+ S +A+ LF +M
Sbjct: 344 STW--NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQME 401
Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
+ N+ +F S L CA + L+LG Q+H +V+ G + FV NAL+ +Y KCG +E
Sbjct: 402 REGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIE 461
Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACA 455
+ +LF E ++ V+WNTMI GY + G A+ F M E + + T +VL AC+
Sbjct: 462 EANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACS 521
Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANA-----LIDMYAKCGSITDAR-LVFDMMNDWN 509
++ G Q + T+ +Y V+ N+ ++D+ + G + DA L+ +M + +
Sbjct: 522 HTGLVDKGRQ-YFYTMTQDYG---VMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPD 577
Query: 510 EVSWNAMISGYSMHG 524
W ++ +HG
Sbjct: 578 AAIWGTLLGASRVHG 592
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 459 bits (1182), Expect = e-128, Method: Compositional matrix adjust.
Identities = 271/785 (34%), Positives = 424/785 (54%), Gaps = 40/785 (5%)
Query: 58 SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
+Y +++C D+ + +H V+K G D+F N L++ Y + DA +LFD M
Sbjct: 189 TYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIM 248
Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE--- 174
PERN +S+ + I+ ++ + E+ L + E + A L ++ + E
Sbjct: 249 PERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREI 308
Query: 175 -LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--------------GLF 219
L V KL D + AL+D +S CGC+ A+ +F G F
Sbjct: 309 GLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGF 368
Query: 220 NDCFEEALNF--FSQMRAVG--FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
+ + F QM A G K + T + C + K H +LK +
Sbjct: 369 SAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVY 428
Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTD---LSIDAVELFC 332
+ VA A + Y K G +S A+R+F + K V W+ +I +AQ++ LS+DA
Sbjct: 429 NELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDA---HL 485
Query: 333 RMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCG 392
+M+ + + P+ FT S+L AC+ ++ L LG ++H ++R L D+FV +++ +Y CG
Sbjct: 486 QMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCG 545
Query: 393 RMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLR 452
+ LF ++ V+WNT+I GY+Q G +A+ +F +M+ + ++ V
Sbjct: 546 ELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFG 605
Query: 453 ACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS 512
AC+ L +L G + H +K + D +A +LIDMYAK GSIT + VF+ + + + S
Sbjct: 606 ACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS 665
Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
WNAMI GY +HGL+ E +K+F+ MQ+ G P++LTF+GVL+AC++ GL+ +G Y M
Sbjct: 666 WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMK 725
Query: 573 ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLI-EGIPFQPSVMIWRALLGACIIHNNVEI 631
+++G++P ++HY ++ +LGRAG LDKA +++ E + + V IW++LL +C IH N+E+
Sbjct: 726 SSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEM 785
Query: 632 GRLSAQHILDFEPEDEATHVLLSNIYAMARSWEK-----------AASKEPGLSWIENQG 680
G A + + EPE +VLLSN+YA WE + K+ G SWIE
Sbjct: 786 GEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNR 845
Query: 681 MVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEK 740
V F G+ I+ + L MK K GY PD +V D+ E+EK L HSEK
Sbjct: 846 KVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEK 905
Query: 741 LALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCS 800
LAL + L K + IR+ KNLRICVDCH A K+ISK+++REI++RD RFHHF++G CS
Sbjct: 906 LALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCS 965
Query: 801 CGDFW 805
CGD+W
Sbjct: 966 CGDYW 970
Score = 195 bits (496), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/449 (28%), Positives = 229/449 (51%), Gaps = 27/449 (6%)
Query: 196 TALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQM-RAVGF 238
T +I +++CG + +R VFD L N+ ++E L F +M
Sbjct: 124 TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDL 183
Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARR 298
P++FT+ V+KAC G+ + + + HG +KT D++V AL+ Y G +++A +
Sbjct: 184 LPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQ 243
Query: 299 IFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ-----AFVAPNQFTFVSVLQAC 353
+F+ MP+++++ W+ MI ++ S ++ L M + AF+ P+ T V+VL C
Sbjct: 244 LFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFM-PDVATLVTVLPVC 302
Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
A + LG +H V++ L ++ ++NALMD+Y+KCG + N+ +F + +N V+WN
Sbjct: 303 AREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWN 362
Query: 414 TMIVGYVQLGEVGKAMIMFSKMLE--EQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
TM+ G+ G+ + +ML E V A EVT + + C + L ++HC ++
Sbjct: 363 TMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSL 422
Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
K + + +VANA + YAKCGS++ A+ VF + SWNA+I G++ L
Sbjct: 423 KQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLD 482
Query: 532 VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLL 591
M+ G P++ T +LSACS L G+ ++ N+ +E + Y S++SL
Sbjct: 483 AHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW-LERDLFVYLSVLSLY 541
Query: 592 GRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
G L L + + S++ W ++
Sbjct: 542 IHCGELCTVQALFDAME-DKSLVSWNTVI 569
Score = 172 bits (437), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 189/368 (51%), Gaps = 37/368 (10%)
Query: 276 DLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM- 334
D + ++ +Y G ++R +F+ + K++ W+ +I+ Y++ +L + +E F M
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 178
Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
+ P+ FT+ V++ACA M + +G +H LVV+ GL+ DVFV NAL+ Y G +
Sbjct: 179 STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFV 238
Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ-----VPATEVTYSS 449
++++LF P+RN V+WN+MI + G ++ ++ +M+EE +P T +
Sbjct: 239 TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDV-ATLVT 297
Query: 450 VLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWN 509
VL CA + G VH VK D ++V+ NAL+DMY+KCG IT+A+++F M N+ N
Sbjct: 298 VLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKN 357
Query: 510 EVSWNAMISGYSMHGLSAEVLKVFDLMQQ-----RGWRPNNLTFVGVLSACSNGGLLE-- 562
VSWN M+ G+S G + FD+++Q + + +T + + C + L
Sbjct: 358 VVSWNTMVGGFSAEG---DTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSL 414
Query: 563 --------QGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVM 614
+ E + +VAN + V+ + G L A ++ GI +V
Sbjct: 415 KELHCYSLKQEFVYNELVAN-----------AFVASYAKCGSLSYAQRVFHGIR-SKTVN 462
Query: 615 IWRALLGA 622
W AL+G
Sbjct: 463 SWNALIGG 470
Score = 160 bits (405), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 148/621 (23%), Positives = 268/621 (43%), Gaps = 50/621 (8%)
Query: 63 LQSCIQNDDLQTAMTIHCQVLKKGNCL---DLFATNVLLNVYVKLNRLPDATKLFDEMPE 119
LQ+ + D++ IH Q++ L D+ T ++ +Y D+ +FD +
Sbjct: 91 LQASGKRKDIEMGRKIH-QLVSGSTRLRNDDVLCTRII-TMYAMCGSPDDSRFVFDALRS 148
Query: 120 RNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHEL-NPFAFTAFLKVLVSMGWAELCPC 178
+N + I Y+ + + E + F + L + F + +K M +
Sbjct: 149 KNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLA 208
Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--------------GLFND--C 222
V V K G + FVG AL+ + G V A ++FD +F+D
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268
Query: 223 FEEALNFFSQMRAV----GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
EE+ +M F P+ T VL C I + K HG A+K + +L
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV 328
Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
+ AL+D+Y+K G I+NA+ IF+ K+V+ W+ M+ ++ D F +RQ
Sbjct: 329 LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEG---DTHGTFDVLRQML 385
Query: 339 -----VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGR 393
V ++ T ++ + C L ++H ++ + + V+NA + YAKCG
Sbjct: 386 AGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGS 445
Query: 394 MENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRA 453
+ + +F + +WN +I G+ Q + ++ +M + T S+L A
Sbjct: 446 LSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSA 505
Query: 454 CASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSW 513
C+ L +L G +VH ++ + D+ V +++ +Y CG + + +FD M D + VSW
Sbjct: 506 CSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSW 565
Query: 514 NAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACS---NGGLLEQGEAY-FK 569
N +I+GY +G L VF M G + ++ + V ACS + L + AY K
Sbjct: 566 NTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALK 625
Query: 570 SMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNV 629
++ + C S++ + + G + +++K+ G+ + S W A++ IH
Sbjct: 626 HLLEDDAFIAC-----SLIDMYAKNGSITQSSKVFNGLK-EKSTASWNAMIMGYGIHG-- 677
Query: 630 EIGRLSAQHILDFEPEDEATH 650
L+ + I FE H
Sbjct: 678 ----LAKEAIKLFEEMQRTGH 694
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 113/214 (52%), Gaps = 6/214 (2%)
Query: 349 VLQACATMEGLDLGNQIHSLVV-RVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKR 407
+LQA + +++G +IH LV L +D + ++ +YA CG ++S +F +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 408 NHVTWNTMIVGYVQLGEVGKAMIMFSKMLE-EQVPATEVTYSSVLRACASLAALEPGMQV 466
N WN +I Y + + + F +M+ + TY V++ACA ++ + G+ V
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 467 HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLS 526
H L VK DV V NAL+ Y G +TDA +FD+M + N VSWN+MI +S +G S
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 527 AE-VLKVFDLMQQRG---WRPNNLTFVGVLSACS 556
E L + ++M++ G + P+ T V VL C+
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA 303
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 143/327 (43%), Gaps = 43/327 (13%)
Query: 21 INAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHC 80
+N+W + A + + S + S +S + + L +C + L+ +H
Sbjct: 461 VNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHG 520
Query: 81 QVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVE 140
+++ DLF +L++Y+ L LFD M +++ +S+ T I GY +
Sbjct: 521 FIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDR 580
Query: 141 AVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVF----ACVYKLGH--DSNAFV 194
A+G+F + G +L + ++ G L P + A Y L H + +AF+
Sbjct: 581 ALGVFRQMVLYGIQL------CGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFI 634
Query: 195 GTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMRAVGF 238
+LID ++ G + + KVF+GL + +EA+ F +M+ G
Sbjct: 635 ACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGH 694
Query: 239 KPNNFTFAFVLKAC-------LGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
P++ TF VL AC GL + KS+ G + +L ++D+ ++G
Sbjct: 695 NPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFG------LKPNLKHYACVIDMLGRAG 748
Query: 292 EISNARRIF-EEMPKK-DVIPWSFMIA 316
++ A R+ EEM ++ DV W +++
Sbjct: 749 QLDKALRVVAEEMSEEADVGIWKSLLS 775
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 459 bits (1180), Expect = e-128, Method: Compositional matrix adjust.
Identities = 242/599 (40%), Positives = 346/599 (57%), Gaps = 13/599 (2%)
Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
N F AL F +MR G PN+FTF KA L K H A+K +D++V
Sbjct: 86 NGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFV 145
Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
+ D+Y K+ +AR++F+E+P++++ W+ I+ +A+E F R+
Sbjct: 146 GCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDG 205
Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
PN TF + L AC+ L+LG Q+H LV+R G +DV V N L+D Y KC ++ +S
Sbjct: 206 HPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEI 265
Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
+F E +N V+W +++ YVQ E KA +++ + ++ V ++ SSVL ACA +A
Sbjct: 266 IFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAG 325
Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
LE G +H VKA + + V +AL+DMY KCG I D+ FD M + N V+ N++I G
Sbjct: 326 LELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGG 385
Query: 520 YSMHGLSAEVLKVFDLMQQRGW--RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
Y+ G L +F+ M RG PN +TFV +LSACS G +E G F SM + YGI
Sbjct: 386 YAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGI 445
Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQ 637
EP EHY+ +V +LGRAG +++A + I+ +P QP++ +W AL AC +H ++G L+A+
Sbjct: 446 EPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAE 505
Query: 638 HILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVHYFR 686
++ +P+D HVLLSN +A A W +A + K G SWI + VH F+
Sbjct: 506 NLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQ 565
Query: 687 AGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFA 746
A D SH I+ L L + AGY PDL L D+ E+EK + HSEKLALAF
Sbjct: 566 AKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFG 625
Query: 747 LFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
L +P S PIRI KNLRIC DCH+ K +S V+REII+RD +RFH F+DG CSC D+W
Sbjct: 626 LLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 210 bits (535), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 142/487 (29%), Positives = 231/487 (47%), Gaps = 29/487 (5%)
Query: 63 LQSCIQNDDLQTAMTIHCQVLKKGNCLD----LFATNVLLNVYVKLNRLPDATKLFDEMP 118
L++ I ++ +H +++K LD F N L+N+Y KL+ A + P
Sbjct: 13 LKNAISASSMRLGRVVHARIVKT---LDSPPPPFLANYLINMYSKLDHPESARLVLRLTP 69
Query: 119 ERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPC 178
RN +S+ + I G + F A+ F + REG N F F K + S+
Sbjct: 70 ARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQ 129
Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFE-------------- 224
+ A K G + FVG + D + + ARK+FD + E
Sbjct: 130 IHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGR 189
Query: 225 --EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
EA+ F + R + PN+ TF L AC + + HG L++ ++ D+ V
Sbjct: 190 PREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNG 249
Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
L+D Y K +I ++ IF EM K+ + W ++A Y Q A L+ R R+ V +
Sbjct: 250 LIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETS 309
Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
F SVL ACA M GL+LG IH+ V+ + +FV +AL+D+Y KCG +E+S + F
Sbjct: 310 DFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFD 369
Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATE--VTYSSVLRACASLAAL 460
E P++N VT N++I GY G+V A+ +F +M T +T+ S+L AC+ A+
Sbjct: 370 EMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAV 429
Query: 461 EPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDARLVFDMMNDWNEVS-WNAMI 517
E GM++ ++++ Y ++ + ++DM + G + A M +S W A+
Sbjct: 430 ENGMKIFD-SMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQ 488
Query: 518 SGYSMHG 524
+ MHG
Sbjct: 489 NACRMHG 495
Score = 166 bits (419), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 193/392 (49%), Gaps = 11/392 (2%)
Query: 245 FAFVLKACLGLDTIRVAKSAHGCALKTC-YEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
+LK + ++R+ + H +KT ++A L+++Y+K +AR +
Sbjct: 9 LGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLT 68
Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
P ++V+ W+ +I+ AQ A+ F MR+ V PN FTF +A A++ G
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGK 128
Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
QIH+L V+ G + DVFV + D+Y K +++ +LF E P+RN TWN I V G
Sbjct: 129 QIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDG 188
Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN 483
+A+ F + +T+ + L AC+ L GMQ+H L +++ +D DV V N
Sbjct: 189 RPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCN 248
Query: 484 ALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRP 543
LID Y KC I + ++F M N VSW ++++ Y + + ++ ++
Sbjct: 249 GLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVET 308
Query: 544 NNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHY----TSMVSLLGRAGHLDK 599
++ VLSAC+ LE G + + + ++ C+E +++V + G+ G ++
Sbjct: 309 SDFMISSVLSACAGMAGLELGRS-----IHAHAVKACVERTIFVGSALVDMYGKCGCIED 363
Query: 600 AAKLIEGIPFQPSVMIWRALLGACIIHNNVEI 631
+ + + +P + +++ +L+G V++
Sbjct: 364 SEQAFDEMP-EKNLVTRNSLIGGYAHQGQVDM 394
Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 116/280 (41%), Gaps = 31/280 (11%)
Query: 55 NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
NS ++ L +C L M +H VL+ G D+ N L++ Y K ++ + +F
Sbjct: 208 NSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIF 267
Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
EM +N +S+ + + Y + + +A L+ ++ E + F ++ L M E
Sbjct: 268 TEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLE 327
Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------- 218
L + A K + FVG+AL+D + CGC+E + + FD +
Sbjct: 328 LGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYA 387
Query: 219 FNDCFEEALNFFSQM--RAVGFKPNNFTFAFVLKACL-------GLDTIRVAKSAHGCAL 269
+ AL F +M R G PN TF +L AC G+ +S +G
Sbjct: 388 HQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYG--- 444
Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
E ++D+ ++G + A ++MP + I
Sbjct: 445 ---IEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTI 481
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 455 bits (1170), Expect = e-127, Method: Compositional matrix adjust.
Identities = 243/624 (38%), Positives = 364/624 (58%), Gaps = 44/624 (7%)
Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
AL + M ++G PN++TF FVLK+C + + HG LK ++DLYV +L+
Sbjct: 118 ALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLIS 177
Query: 286 LYTKSGE-------------------------------ISNARRIFEEMPKKDVIPWSFM 314
+Y ++G I NA+++F+E+P KDV+ W+ M
Sbjct: 178 MYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAM 237
Query: 315 IARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL 374
I+ YA+T +A+ELF M + V P++ T V+V+ ACA ++LG Q+H + G
Sbjct: 238 ISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGF 297
Query: 375 LSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSK 434
S++ + NAL+D+Y+KCG +E + LF P ++ ++WNT+I GY + +A+++F +
Sbjct: 298 GSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQE 357
Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVK--ANYDMDVVVANALIDMYAKC 492
ML +VT S+L ACA L A++ G +H K + +LIDMYAKC
Sbjct: 358 MLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKC 417
Query: 493 GSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL 552
G I A VF+ + + SWNAMI G++MHG + +F M++ G +P+++TFVG+L
Sbjct: 418 GDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLL 477
Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
SACS+ G+L+ G F++M +Y + P +EHY M+ LLG +G +A ++I + +P
Sbjct: 478 SACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPD 537
Query: 613 VMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW--------- 663
+IW +LL AC +H NVE+G A++++ EPE+ ++VLLSNIYA A W
Sbjct: 538 GVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRAL 597
Query: 664 --EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAV 721
+K K PG S IE +VH F GD H I GMLE + + KAG++PD S V
Sbjct: 598 LNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEV 657
Query: 722 LRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQR 781
L+++ E+ KE L HSEKLA+AF L P + + I+KNLR+C +CH A K+ISKI +R
Sbjct: 658 LQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKR 717
Query: 782 EIIIRDVHRFHHFQDGCCSCGDFW 805
EII RD RFHHF+DG CSC D+W
Sbjct: 718 EIIARDRTRFHHFRDGVCSCNDYW 741
Score = 166 bits (420), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 188/387 (48%), Gaps = 39/387 (10%)
Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACAT 355
A +F+ + + +++ W+ M +A + + A++L+ M + PN +TF VL++CA
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 356 MEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM--------------------- 394
+ G QIH V+++G D++V +L+ +Y + GR+
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206
Query: 395 ----------ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATE 444
EN+ +LF E P ++ V+WN MI GY + G +A+ +F M++ V E
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 266
Query: 445 VTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDM 504
T +V+ ACA ++E G QVH + ++ + NALID+Y+KCG + A +F+
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFER 326
Query: 505 MNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG 564
+ + +SWN +I GY+ L E L +F M + G PN++T + +L AC++ G ++ G
Sbjct: 327 LPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 386
Query: 565 E---AYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLG 621
Y + G+ TS++ + + G ++ A ++ I S+ W A++
Sbjct: 387 RWIHVYIDKRLK--GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIF 443
Query: 622 ACIIHNNVE--IGRLSAQHILDFEPED 646
+H + S + +P+D
Sbjct: 444 GFAMHGRADASFDLFSRMRKIGIQPDD 470
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 158/360 (43%), Gaps = 49/360 (13%)
Query: 55 NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
NS+++ L+SC ++ + IH VLK G LDL+ L+++YV+ RL DA K+F
Sbjct: 133 NSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVF 192
Query: 115 DEMPERNTISFVTTIQGYTV-------------------------------SSQFVEAVG 143
D+ P R+ +S+ I+GY + + EA+
Sbjct: 193 DKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALE 252
Query: 144 LFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFS 203
LF + + + + G EL V + G SN + ALID +S
Sbjct: 253 LFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS 312
Query: 204 VCGCVEFARKVFDGL-FNDC---------------FEEALNFFSQMRAVGFKPNNFTFAF 247
CG +E A +F+ L + D ++EAL F +M G PN+ T
Sbjct: 313 KCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLS 372
Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMD--LYVAVALLDLYTKSGEISNARRIFEEMPK 305
+L AC L I + + H K + + +L+D+Y K G+I A ++F +
Sbjct: 373 ILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILH 432
Query: 306 KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
K + W+ MI +A + + +LF RMR+ + P+ TFV +L AC+ LDLG I
Sbjct: 433 KSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 455 bits (1170), Expect = e-127, Method: Compositional matrix adjust.
Identities = 276/832 (33%), Positives = 414/832 (49%), Gaps = 135/832 (16%)
Query: 56 SHSYATSLQSCI--QNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
++ YA +L+ C+ + LQ A +H ++ G N L++VY K + L A +L
Sbjct: 12 ANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQL 71
Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
FDE+ E + I+ T + GY S A G+F K V M
Sbjct: 72 FDEISEPDKIARTTMVSGYCASGDITLARGVFE------------------KAPVCM--- 110
Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQM 233
+ + A+I FS N+ A+N F +M
Sbjct: 111 ----------------RDTVMYNAMITGFS---------------HNNDGYSAINLFCKM 139
Query: 234 RAVGFKPNNFTFAFVLKA-CLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGE 292
+ GFKP+NFTFA VL L D + H ALK+ V+ AL+ +Y+K
Sbjct: 140 KHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCAS 199
Query: 293 ----ISNARRIFEEMPKKDVIPWSFM--------------------------------IA 316
+ +AR++F+E+ +KD W+ M I+
Sbjct: 200 SPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMIS 259
Query: 317 RYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLS 376
Y +A+E+ RM + + ++FT+ SV++ACAT L LG Q+H+ V+R S
Sbjct: 260 GYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFS 319
Query: 377 DVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML 436
F N+L+ +Y KCG+ + + +F + P ++ V+WN ++ GYV G +G+A ++F +M
Sbjct: 320 FHF-DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMK 378
Query: 437 EEQV-------------------------------PATEVTYSSVLRACASLAALEPGMQ 465
E+ + + +S +++CA L A G Q
Sbjct: 379 EKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQ 438
Query: 466 VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGL 525
H +K +D + NALI MYAKCG + +AR VF M + VSWNA+I+ HG
Sbjct: 439 YHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGH 498
Query: 526 SAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYT 585
AE + V++ M ++G RP+ +T + VL+ACS+ GL++QG YF SM Y I P +HY
Sbjct: 499 GAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYA 558
Query: 586 SMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPE 645
++ LL R+G A +IE +PF+P+ IW ALL C +H N+E+G ++A + PE
Sbjct: 559 RLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPE 618
Query: 646 DEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHAD 694
+ T++LLSN++A WE+ A KE SWIE + VH F DTSH +
Sbjct: 619 HDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPE 678
Query: 695 MNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVRED-EKERYLWVHSEKLALAFALFKMPPS 753
+ L+ L + R+ GY+PD S VL DV D KE L HSEK+A+AF L K+PP
Sbjct: 679 AEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPG 738
Query: 754 SPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
+ IRI KNLR C DCH + +S +VQR+II+RD RFHHF++G CSCG+FW
Sbjct: 739 TTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 90.5 bits (223), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 130/307 (42%), Gaps = 59/307 (19%)
Query: 53 EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
E + +Y + +++C LQ +H VL++ + N L+++Y K + +A
Sbjct: 283 ELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRED-FSFHFDNSLVSLYYKCGKFDEARA 341
Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEA------------------------------- 141
+F++MP ++ +S+ + GY S EA
Sbjct: 342 IFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEG 401
Query: 142 VGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDA 201
+ LFS + REG E +AF+ +K +G A + K+G DS+ G ALI
Sbjct: 402 LKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITM 461
Query: 202 FSVCGCVEFARKVFDGLFNDCFE------------------EALNFFSQMRAVGFKPNNF 243
++ CG VE AR+VF + C + EA++ + +M G +P+
Sbjct: 462 YAKCGVVEEARQVFRTM--PCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRI 519
Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEM----DLYVAVALLDLYTKSGEISNARRI 299
T VL AC + + +++T Y + D Y L+DL +SG+ S+A +
Sbjct: 520 TLLTVLTACSHAGLVDQGRKYFD-SMETVYRIPPGADHY--ARLIDLLCRSGKFSDAESV 576
Query: 300 FEEMPKK 306
E +P K
Sbjct: 577 IESLPFK 583
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 453 bits (1166), Expect = e-126, Method: Compositional matrix adjust.
Identities = 228/540 (42%), Positives = 335/540 (62%), Gaps = 16/540 (2%)
Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ 336
+++ L+++Y K +++A ++F++MP+++VI W+ MI+ Y++ + A+EL M +
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
V PN +T+ SVL++C M + + +H +++ GL SDVFV +AL+DV+AK G E+
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPED 212
Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
++ +F E + + WN++I G+ Q A+ +F +M A + T +SVLRAC
Sbjct: 213 ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTG 272
Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
LA LE GMQ H VK YD D+++ NAL+DMY KCGS+ DA VF+ M + + ++W+ M
Sbjct: 273 LALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTM 330
Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
ISG + +G S E LK+F+ M+ G +PN +T VGVL ACS+ GLLE G YF+SM YG
Sbjct: 331 ISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYG 390
Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
I+P EHY M+ LLG+AG LD A KL+ + +P + WR LLGAC + N+ + +A
Sbjct: 391 IDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAA 450
Query: 637 QHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYF 685
+ ++ +PED T+ LLSNIYA ++ W ++ KEPG SWIE +H F
Sbjct: 451 KKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAF 510
Query: 686 RAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAF 745
GD SH + + L L + GY+P+ + VL+D+ ++ E L HSEKLALAF
Sbjct: 511 IIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAF 570
Query: 746 ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
L +P IRI KNLRIC DCH K+ SK+ R I+IRD R+HHFQDG CSCGD+W
Sbjct: 571 GLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/380 (31%), Positives = 193/380 (50%), Gaps = 23/380 (6%)
Query: 55 NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
+S +Y+ ++ CI N + I + G+ +F NVL+N+YVK N L DA +LF
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119
Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
D+MP+RN IS+ T I Y+ +A+ L + R+ N + +++ L+ M
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVR 179
Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
+ C + K G +S+ FV +ALID F+ G E A VFD +
Sbjct: 180 MLHC---GIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFA 236
Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
N + AL F +M+ GF T VL+AC GL + + AH +K Y+ DL
Sbjct: 237 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLI 294
Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
+ AL+D+Y K G + +A R+F +M ++DVI WS MI+ AQ S +A++LF RM+ +
Sbjct: 295 LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSG 354
Query: 339 VAPNQFTFVSVLQACATMEGLDLG-NQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
PN T V VL AC+ L+ G S+ G+ ++D+ K G+++++
Sbjct: 355 TKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDA 414
Query: 398 VELFAESP-KRNHVTWNTMI 416
V+L E + + VTW T++
Sbjct: 415 VKLLNEMECEPDAVTWRTLL 434
Score = 66.6 bits (161), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV-VA 482
++ +AM + + A TYS +++ C S A+ G + C + N ++ +
Sbjct: 41 DLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLI-CRHLYFNGHRPMMFLV 99
Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
N LI+MY K + DA +FD M N +SW MIS YS + + L++ LM + R
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 543 PNNLTFVGVLSAC---SNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDK 599
PN T+ VL +C S+ +L G + G+E + ++++ + + G +
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRMLHCG-------IIKEGLESDVFVRSALIDVFAKLGEPED 212
Query: 600 AAKLIEGIPFQPSVMIWRALLGA 622
A + + + ++W +++G
Sbjct: 213 ALSVFDEM-VTGDAIVWNSIIGG 234
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 452 bits (1163), Expect = e-126, Method: Compositional matrix adjust.
Identities = 268/802 (33%), Positives = 425/802 (52%), Gaps = 56/802 (6%)
Query: 51 VSEFNSHSYATSLQSCIQN-------DD----------LQTAMTIHCQVLKKGNCLDLFA 93
+ EF++ A +LQ C +N DD LQ+A +H +++ ++
Sbjct: 31 IREFSAS--ANALQDCWKNGNESKEIDDVHTLFRYCTNLQSAKCLHARLVVSKQIQNVCI 88
Query: 94 TNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFST-LHREG 152
+ L+N+Y L + A FD + R+ ++ I GY + E + FS + G
Sbjct: 89 SAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSG 148
Query: 153 HELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFAR 212
+ F + LK ++ C+ K G + +V +LI +S V AR
Sbjct: 149 LTPDYRTFPSVLKACRTVIDGNKIHCL---ALKFGFMWDVYVAASLIHLYSRYKAVGNAR 205
Query: 213 KVFD-------GLFNDCF---------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLD 256
+FD G +N +EAL + +RA+ ++ T +L AC
Sbjct: 206 ILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAG 261
Query: 257 TIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIA 316
+ H ++K E +L+V+ L+DLY + G + + +++F+ M +D+I W+ +I
Sbjct: 262 DFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIK 321
Query: 317 RYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG-LL 375
Y + + A+ LF MR + + P+ T +S+ + + + + +R G L
Sbjct: 322 AYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFL 381
Query: 376 SDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKM 435
D+ + NA++ +YAK G ++++ +F P + ++WNT+I GY Q G +A+ M++ M
Sbjct: 382 EDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIM 441
Query: 436 LEE-QVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGS 494
EE ++ A + T+ SVL AC+ AL GM++H +K +DV V +L DMY KCG
Sbjct: 442 EEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGR 501
Query: 495 ITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSA 554
+ DA +F + N V WN +I+ + HG + + +F M G +P+++TFV +LSA
Sbjct: 502 LEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSA 561
Query: 555 CSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVM 614
CS+ GL+++G+ F+ M +YGI P ++HY MV + GRAG L+ A K I+ + QP
Sbjct: 562 CSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDAS 621
Query: 615 IWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE---------- 664
IW ALL AC +H NV++G+++++H+ + EPE HVLLSN+YA A WE
Sbjct: 622 IWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAH 681
Query: 665 -KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLR 723
K K PG S +E V F G+ +H + L L K + GY+PD VL+
Sbjct: 682 GKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQ 741
Query: 724 DVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREI 783
DV +DEKE L HSE+LA+AFAL P + IRI KNLR+C DCH+ K ISKI +REI
Sbjct: 742 DVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREI 801
Query: 784 IIRDVHRFHHFQDGCCSCGDFW 805
I+RD +RFHHF++G CSCGD+W
Sbjct: 802 IVRDSNRFHHFKNGVCSCGDYW 823
Score = 140 bits (352), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 196/429 (45%), Gaps = 28/429 (6%)
Query: 25 LRGLSAQAALSTQQC-SNSTTTPITFS--VSEFNSHSYATSLQSCIQNDDLQTAMTIHCQ 81
+R + + A+ + C S + +T S + +S + + L +C + D +TIH
Sbjct: 213 VRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSY 272
Query: 82 VLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEA 141
+K G +LF +N L+++Y + RL D K+FD M R+ IS+ + I+ Y ++ Q + A
Sbjct: 273 SIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRA 332
Query: 142 VGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLG-HDSNAFVGTALID 200
+ LF + + + + +L +G C V + G + +G A++
Sbjct: 333 ISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVV 392
Query: 201 AFSVCGCVEFARKVFDGLFNDCF----------------EEALNFFSQMRAVG-FKPNNF 243
++ G V+ AR VF+ L N EA+ ++ M G N
Sbjct: 393 MYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQG 452
Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
T+ VL AC +R HG LK +D++V +L D+Y K G + +A +F ++
Sbjct: 453 TWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQI 512
Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
P+ + +PW+ +IA + AV LF M V P+ TFV++L AC+ +D G
Sbjct: 513 PRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQ 572
Query: 364 QIHSLV-VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAE-SPKRNHVTWNTMIV---- 417
++ G+ + ++D+Y + G++E +++ S + + W ++
Sbjct: 573 WCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRV 632
Query: 418 -GYVQLGEV 425
G V LG++
Sbjct: 633 HGNVDLGKI 641
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 451 bits (1159), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/569 (39%), Positives = 347/569 (60%), Gaps = 11/569 (1%)
Query: 248 VLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKD 307
+L+ C + AK+ HG ++ E D+ + L++ Y+K G + AR++F+ M ++
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 308 VIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
++ W+ MI Y + + +A+++F MR ++FT SVL AC ++H
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 368 LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGK 427
L V+ + +++V AL+D+YAKCG ++++V++F ++ VTW++M+ GYVQ +
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 428 AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALID 487
A++++ + + + T SSV+ AC++LAAL G Q+H + K+ + +V VA++ +D
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 306
Query: 488 MYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLT 547
MYAKCGS+ ++ ++F + + N WN +ISG++ H EV+ +F+ MQQ G PN +T
Sbjct: 307 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 366
Query: 548 FVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGI 607
F +LS C + GL+E+G +FK M YG+ P + HY+ MV +LGRAG L +A +LI+ I
Sbjct: 367 FSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI 426
Query: 608 PFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA 667
PF P+ IW +LL +C ++ N+E+ ++A+ + + EPE+ HVLLSNIYA + WE+ A
Sbjct: 427 PFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIA 486
Query: 668 -----------SKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIP 716
K G SWI+ + VH F G++ H + I L+ L +K RK GY P
Sbjct: 487 KSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKP 546
Query: 717 DLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIIS 776
+ L DV +KE L HSEKLAL F L +P SSP+RI+KNLRICVDCH +K S
Sbjct: 547 SVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAAS 606
Query: 777 KIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
+R II+RDV+RFHHF DG CSCGDFW
Sbjct: 607 MATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 195/411 (47%), Gaps = 22/411 (5%)
Query: 12 CKQLTHQSKINAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDD 71
CK L +S ++ R +S A+ ++ S P +S N + LQ C +N
Sbjct: 22 CKVLPRRSNTSSLSRNISVLASYDQEEVS-----PGRYSNEFSNRNLVHEILQLCARNGA 76
Query: 72 LQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQG 131
+ A H ++++ D+ NVL+N Y K + A ++FD M ER+ +S+ T I
Sbjct: 77 VMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGL 136
Query: 132 YTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSN 191
YT + EA+ +F + EG + + F ++ L A C + K D N
Sbjct: 137 YTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLN 196
Query: 192 AFVGTALIDAFSVCGCVEFARKVFDGLF----------------NDCFEEALNFFSQMRA 235
+VGTAL+D ++ CG ++ A +VF+ + N +EEAL + + +
Sbjct: 197 LYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQR 256
Query: 236 VGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISN 295
+ + N FT + V+ AC L + K H K+ + +++VA + +D+Y K G +
Sbjct: 257 MSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRE 316
Query: 296 ARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACAT 355
+ IF E+ +K++ W+ +I+ +A+ + + LF +M+Q + PN+ TF S+L C
Sbjct: 317 SYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGH 376
Query: 356 MEGLDLGNQIHSLV-VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
++ G + L+ GL +V + ++D+ + G + + EL P
Sbjct: 377 TGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIP 427
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 449 bits (1155), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/604 (39%), Positives = 347/604 (57%), Gaps = 26/604 (4%)
Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
EAL FS MR + P +F +KAC L I K H A Y+ D++V+ AL+
Sbjct: 59 EALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALI 118
Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQ- 343
+Y+ G++ +AR++F+E+PK++++ W+ MI Y ++DAV LF + V N
Sbjct: 119 VMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLF---KDLLVDENDD 175
Query: 344 --------FTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
VSV+ AC+ + L IHS V++ G V V N L+D YAK G
Sbjct: 176 DDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGG 235
Query: 396 NSV--ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPA-TEVTYSSVLR 452
+V ++F + ++ V++N+++ Y Q G +A +F ++++ +V +T S+VL
Sbjct: 236 VAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLL 295
Query: 453 ACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVS 512
A + AL G +H ++ + DV+V ++IDMY KCG + AR FD M + N S
Sbjct: 296 AVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRS 355
Query: 513 WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
W AMI+GY MHG +A+ L++F M G RPN +TFV VL+ACS+ GL +G +F +M
Sbjct: 356 WTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMK 415
Query: 573 ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIG 632
+G+EP +EHY MV LLGRAG L KA LI+ + +P +IW +LL AC IH NVE+
Sbjct: 416 GRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELA 475
Query: 633 RLSAQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGM 681
+S + + + + ++LLS+IYA A W+ + K PG S +E G
Sbjct: 476 EISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGE 535
Query: 682 VHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKL 741
VH F GD H I L LN K +AGY+ + S+V DV E+EKE L VHSEKL
Sbjct: 536 VHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKL 595
Query: 742 ALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSC 801
A+AF + P S + ++KNLR+C DCH IK+ISKIV RE ++RD RFHHF+DG CSC
Sbjct: 596 AIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSC 655
Query: 802 GDFW 805
GD+W
Sbjct: 656 GDYW 659
Score = 159 bits (402), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 188/362 (51%), Gaps = 12/362 (3%)
Query: 277 LYVAVALLDLYTKSGEISNARRIFEE-MPKKDVIPWSFMIARYAQTDLSIDAVELFCRMR 335
L+ +V+ L + E N +F + K DV W+ +IA A++ S +A+ F MR
Sbjct: 9 LFCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMR 68
Query: 336 QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRME 395
+ + P + +F ++AC+++ + G Q H G SD+FVS+AL+ +Y+ CG++E
Sbjct: 69 KLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLE 128
Query: 396 NSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTY------SS 449
++ ++F E PKRN V+W +MI GY G A+ +F +L ++ + + S
Sbjct: 129 DARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVS 188
Query: 450 VLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKC--GSITDARLVFDMMND 507
V+ AC+ + A +H +K +D V V N L+D YAK G + AR +FD + D
Sbjct: 189 VISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVD 248
Query: 508 WNEVSWNAMISGYSMHGLSAEVLKVF-DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEA 566
+ VS+N+++S Y+ G+S E +VF L++ + N +T VL A S+ G L G+
Sbjct: 249 KDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKC 308
Query: 567 YFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH 626
V G+E + TS++ + + G ++ A K + + +V W A++ +H
Sbjct: 309 -IHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMK-NKNVRSWTAMIAGYGMH 366
Query: 627 NN 628
+
Sbjct: 367 GH 368
Score = 144 bits (363), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 190/411 (46%), Gaps = 44/411 (10%)
Query: 58 SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
S+ ++++C D+ + H Q G D+F ++ L+ +Y +L DA K+FDE+
Sbjct: 78 SFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEI 137
Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHE------LNPFAFTAFLKVLVSMG 171
P+RN +S+ + I+GY ++ ++AV LF L + ++ L+ + + +
Sbjct: 138 PKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVP 197
Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVC--GCVEFARKVFD------------- 216
L + + V K G D VG L+DA++ G V ARK+FD
Sbjct: 198 AKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSI 257
Query: 217 -------GLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCAL 269
G+ N+ F E + + V F N T + VL A +R+ K H +
Sbjct: 258 MSVYAQSGMSNEAF-EVFRRLVKNKVVTF--NAITLSTVLLAVSHSGALRIGKCIHDQVI 314
Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVE 329
+ E D+ V +++D+Y K G + AR+ F+ M K+V W+ MIA Y + A+E
Sbjct: 315 RMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALE 374
Query: 330 LFCRMRQAFVAPNQFTFVSVLQACA----TMEGLDLGNQIHSLVVRVGLLSDVFVSNALM 385
LF M + V PN TFVSVL AC+ +EG N + R G+ + ++
Sbjct: 375 LFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKG---RFGVEPGLEHYGCMV 431
Query: 386 DVYAKCGRMENSVELFAESP-KRNHVTWNTMIVG-----YVQLGEVGKAMI 430
D+ + G ++ + +L K + + W++++ V+L E+ A +
Sbjct: 432 DLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARL 482
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 53/114 (46%)
Query: 51 VSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDA 110
V FN+ + +T L + + L+ IH QV++ G D+ ++++Y K R+ A
Sbjct: 282 VVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETA 341
Query: 111 TKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFL 164
K FD M +N S+ I GY + +A+ LF + G N F + L
Sbjct: 342 RKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 447 bits (1151), Expect = e-124, Method: Compositional matrix adjust.
Identities = 269/809 (33%), Positives = 401/809 (49%), Gaps = 131/809 (16%)
Query: 74 TAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYT 133
TA +HC+V+K G ++ N L+NVY K A KLFDEMP R S+ T + Y+
Sbjct: 32 TAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYS 91
Query: 134 VSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAF 193
F L + S+ W
Sbjct: 92 KRGDMDSTCEFFDQLPQRD----------------SVSW--------------------- 114
Query: 194 VGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACL 253
T +I + G + +A+ M G +P FT VL +
Sbjct: 115 --TTMIVGYKNIGQ---------------YHKAIRVMGDMVKEGIEPTQFTLTNVLASVA 157
Query: 254 GLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIF------------- 300
+ K H +K ++ V+ +LL++Y K G+ A+ +F
Sbjct: 158 ATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNA 217
Query: 301 ------------------EEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM-RQAFVAP 341
E+M ++D++ W+ MI+ + Q + A+++F +M R + ++P
Sbjct: 218 MIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSP 277
Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVEL- 400
++FT SVL ACA +E L +G QIHS +V G V NAL+ +Y++CG +E + L
Sbjct: 278 DRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLI 337
Query: 401 --------------------------------FAESPKRNHVTWNTMIVGYVQLGEVGKA 428
F R+ V W MIVGY Q G G+A
Sbjct: 338 EQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEA 397
Query: 429 MIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDM 488
+ +F M+ T +++L +SLA+L G Q+H VK+ V V+NALI M
Sbjct: 398 INLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITM 457
Query: 489 YAKCGSITDARLVFDMMN-DWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLT 547
YAK G+IT A FD++ + + VSW +MI + HG + E L++F+ M G RP+++T
Sbjct: 458 YAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHIT 517
Query: 548 FVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGI 607
+VGV SAC++ GL+ QG YF M I P + HY MV L GRAG L +A + IE +
Sbjct: 518 YVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKM 577
Query: 608 PFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA 667
P +P V+ W +LL AC +H N+++G+++A+ +L EPE+ + L+N+Y+ WE+AA
Sbjct: 578 PIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAA 637
Query: 668 S-----------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIP 716
KE G SWIE + VH F D +H + N I ++ + + +K GY+P
Sbjct: 638 KIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVP 697
Query: 717 DLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIIS 776
D ++VL D+ E+ KE+ L HSEKLA+AF L P + +RI+KNLR+C DCHTAIK IS
Sbjct: 698 DTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFIS 757
Query: 777 KIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
K+V REII+RD RFHHF+DG CSC D+W
Sbjct: 758 KLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 153/337 (45%), Gaps = 72/337 (21%)
Query: 340 APNQFTFVSVLQACATM--------EGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKC 391
AP + ++L+ C + G +H V++ GL+ V++ N LM+VY+K
Sbjct: 3 APVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKT 62
Query: 392 -------------------------------GRMENSVELFAESPKRNHVTWNTMIVGYV 420
G M+++ E F + P+R+ V+W TMIVGY
Sbjct: 63 GYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYK 122
Query: 421 QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVV 480
+G+ KA+ + M++E + T+ T ++VL + A+ +E G +VH VK +V
Sbjct: 123 NIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVS 182
Query: 481 VANALIDMYAKCGSITDARLVFDMM-----NDWNE------------------------- 510
V+N+L++MYAKCG A+ VFD M + WN
Sbjct: 183 VSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERD 242
Query: 511 -VSWNAMISGYSMHGLSAEVLKVFD-LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYF 568
V+WN+MISG++ G L +F +++ P+ T VLSAC+N L G+
Sbjct: 243 IVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQ-I 301
Query: 569 KSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
S + G + +++S+ R G ++ A +LIE
Sbjct: 302 HSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIE 338
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 445 bits (1145), Expect = e-124, Method: Compositional matrix adjust.
Identities = 258/795 (32%), Positives = 393/795 (49%), Gaps = 99/795 (12%)
Query: 56 SHSYATSLQSCI----QNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
S+ Y+ ++ CI +N M IH +++ + F N +++ Y + A
Sbjct: 3 SNYYSVQIKQCIGLGARNQSRYVKM-IHGNIIRALPYPETFLYNNIVHAYALMKSSTYAR 61
Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMG 171
++FD +P+ N S+ + Y+ + E F L
Sbjct: 62 RVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLP---------------------- 99
Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFS 231
D + LI+ +S+ G V A K ++ + D F +
Sbjct: 100 -----------------DRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRD-------FSA 135
Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
+ V T +LK + + K HG +K +E L V LL +Y G
Sbjct: 136 NLTRV-------TLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVG 188
Query: 292 EISNARRIFEEMP------------------------------KKDVIPWSFMIARYAQT 321
IS+A+++F + +KD + W+ MI AQ
Sbjct: 189 CISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQN 248
Query: 322 DLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVS 381
L+ +A+E F M+ + +Q+ F SVL AC + ++ G QIH+ ++R ++V
Sbjct: 249 GLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVG 308
Query: 382 NALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVP 441
+AL+D+Y KC + + +F ++N V+W M+VGY Q G +A+ +F M +
Sbjct: 309 SALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID 368
Query: 442 ATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLV 501
T + ACA++++LE G Q H + + V V+N+L+ +Y KCG I D+ +
Sbjct: 369 PDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRL 428
Query: 502 FDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLL 561
F+ MN + VSW AM+S Y+ G + E +++FD M Q G +P+ +T GV+SACS GL+
Sbjct: 429 FNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLV 488
Query: 562 EQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLG 621
E+G+ YFK M + YGI P I HY+ M+ L R+G L++A + I G+PF P + W LL
Sbjct: 489 EKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548
Query: 622 ACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKE 670
AC N+EIG+ +A+ +++ +P A + LLS+IYA W EK KE
Sbjct: 549 ACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKE 608
Query: 671 PGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEK 730
PG SWI+ +G +H F A D S ++ I LE LN K GY PD S V DV E K
Sbjct: 609 PGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVK 668
Query: 731 ERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHR 790
+ L HSE+LA+AF L +P PIR+ KNLR+CVDCH A K IS + REI++RD R
Sbjct: 669 VKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVR 728
Query: 791 FHHFQDGCCSCGDFW 805
FH F+DG CSCGDFW
Sbjct: 729 FHRFKDGTCSCGDFW 743
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 117/287 (40%), Gaps = 28/287 (9%)
Query: 53 EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
+ + + + + L +C + IH +++ ++ + L+++Y K L A
Sbjct: 267 KMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKT 326
Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
+FD M ++N +S+ + GY + + EAV +F + R G + + + + ++
Sbjct: 327 VFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSS 386
Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-FNDCFE------- 224
E G V +L+ + CG ++ + ++F+ + D
Sbjct: 387 LEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSA 446
Query: 225 --------EALNFFSQMRAVGFKPNNFTFAFVLKAC--LGLDTIRVAKSAHGCALKTCYE 274
E + F +M G KP+ T V+ AC GL V K L T E
Sbjct: 447 YAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGL----VEKGQRYFKLMTS-E 501
Query: 275 MDLYVAVA----LLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
+ ++ ++DL+++SG + A R MP D I W+ +++
Sbjct: 502 YGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 445 bits (1145), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/666 (36%), Positives = 367/666 (55%), Gaps = 61/666 (9%)
Query: 201 AFSVCGCVEFARKVFDGLFN-----------------DCFEEALNFFSQMRAVGFKPNNF 243
A S +E+ARKVFD + D F + PN +
Sbjct: 73 ALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKY 132
Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
TF F++KA + ++ + +S HG A+K+ D++VA +L+ Y G++ +A ++F +
Sbjct: 133 TFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTI 192
Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
+KDV+ W+ MI + Q A+ELF +M V + T V VL ACA + L+ G
Sbjct: 193 KEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGR 252
Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYV--- 420
Q+ S + + ++ ++NA++D+Y KCG +E++ LF ++++VTW TM+ GY
Sbjct: 253 QVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISE 312
Query: 421 ----------------------------QLGEVGKAMIMFSKM-LEEQVPATEVTYSSVL 451
Q G+ +A+I+F ++ L++ + ++T S L
Sbjct: 313 DYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTL 372
Query: 452 RACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEV 511
ACA + ALE G +H K M+ V +ALI MY+KCG + +R VF+ + +
Sbjct: 373 SACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVF 432
Query: 512 SWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSM 571
W+AMI G +MHG E + +F MQ+ +PN +TF V ACS+ GL+++ E+ F M
Sbjct: 433 VWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQM 492
Query: 572 VANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEI 631
+NYGI P +HY +V +LGR+G+L+KA K IE +P PS +W ALLGAC IH N+ +
Sbjct: 493 ESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNL 552
Query: 632 GRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQG 680
++ +L+ EP ++ HVLLSNIYA WE + KEPG S IE G
Sbjct: 553 AEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDG 612
Query: 681 MVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDE-KERYLWVHSE 739
M+H F +GD +H + G L + K + GY P++S VL+ + E+E KE+ L +HSE
Sbjct: 613 MIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSE 672
Query: 740 KLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCC 799
KLA+ + L IR+IKNLR+C DCH+ K+IS++ REII+RD +RFHHF++G C
Sbjct: 673 KLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQC 732
Query: 800 SCGDFW 805
SC DFW
Sbjct: 733 SCNDFW 738
Score = 209 bits (533), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 125/405 (30%), Positives = 211/405 (52%), Gaps = 37/405 (9%)
Query: 257 TIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKS--GEISNARRIFEEMPKKDVIPWSFM 314
++R K HG ++T D Y A L + S + AR++F+E+PK + W+ +
Sbjct: 42 SLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTL 101
Query: 315 IARYAQTDLSIDAVELFCRM-RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVG 373
I YA + ++ F M ++ PN++TF +++A A + L LG +H + V+
Sbjct: 102 IRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSA 161
Query: 374 LLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFS 433
+ SDVFV+N+L+ Y CG ++++ ++F +++ V+WN+MI G+VQ G KA+ +F
Sbjct: 162 VGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFK 221
Query: 434 KMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCG 493
KM E V A+ VT VL ACA + LE G QV + ++++ +ANA++DMY KCG
Sbjct: 222 KMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCG 281
Query: 494 SITDARLVFDMMNDWNEVS-------------------------------WNAMISGYSM 522
SI DA+ +FD M + + V+ WNA+IS Y
Sbjct: 282 SIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQ 341
Query: 523 HGLSAEVLKVFDLMQ-QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
+G E L VF +Q Q+ + N +T V LSAC+ G LE G + S + +GI
Sbjct: 342 NGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGR-WIHSYIKKHGIRMNF 400
Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH 626
++++ + + G L+K+ ++ + + V +W A++G +H
Sbjct: 401 HVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMH 444
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 201/444 (45%), Gaps = 54/444 (12%)
Query: 63 LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVL--LNVYVKLNRLPDATKLFDEMPER 120
++ C+ L+ H +++ G D ++ + L + L A K+FDE+P+
Sbjct: 37 IERCV---SLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKP 93
Query: 121 NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGH-ELNPFAFTAFLKVLVSMGWAELCPCV 179
N+ ++ T I+ Y V ++ F + E N + F +K + L +
Sbjct: 94 NSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSL 153
Query: 180 FACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF-----------DGLFNDCFE---- 224
K S+ FV +LI + CG ++ A KVF + + N +
Sbjct: 154 HGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSP 213
Query: 225 -EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL 283
+AL F +M + K ++ T VL AC + + + + ++L +A A+
Sbjct: 214 DKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAM 273
Query: 284 LDLYTKSGEISNARRIFE-------------------------------EMPKKDVIPWS 312
LD+YTK G I +A+R+F+ MP+KD++ W+
Sbjct: 274 LDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWN 333
Query: 313 FMIARYAQTDLSIDAVELFCRMR-QAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR 371
+I+ Y Q +A+ +F ++ Q + NQ T VS L ACA + L+LG IHS + +
Sbjct: 334 ALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK 393
Query: 372 VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIM 431
G+ + V++AL+ +Y+KCG +E S E+F KR+ W+ MI G G +A+ M
Sbjct: 394 HGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDM 453
Query: 432 FSKMLEEQVPATEVTYSSVLRACA 455
F KM E V VT+++V AC+
Sbjct: 454 FYKMQEANVKPNGVTFTNVFCACS 477
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 159/323 (49%), Gaps = 25/323 (7%)
Query: 338 FVAPNQFT-------FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNAL--MDVY 388
F PNQ T +S+++ C ++ L Q H ++R G SD + ++ L M
Sbjct: 18 FSNPNQPTTNNERSRHISLIERCVSLRQL---KQTHGHMIRTGTFSDPYSASKLFAMAAL 74
Query: 389 AKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEE-QVPATEVTY 447
+ +E + ++F E PK N WNT+I Y + ++ F M+ E Q + T+
Sbjct: 75 SSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTF 134
Query: 448 SSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND 507
+++A A +++L G +H + VK+ DV VAN+LI Y CG + A VF + +
Sbjct: 135 PFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKE 194
Query: 508 WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGE-- 565
+ VSWN+MI+G+ G + L++F M+ + +++T VGVLSAC+ LE G
Sbjct: 195 KDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQV 254
Query: 566 -AYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACI 624
+Y + N + +M+ + + G ++ A +L + + + +V W +L
Sbjct: 255 CSYIEENRVNVNLTLA----NAMLDMYTKCGSIEDAKRLFDAMEEKDNV-TWTTMLDGYA 309
Query: 625 IHNNVEIGRLSAQHILDFEPEDE 647
I + E +A+ +L+ P+ +
Sbjct: 310 ISEDYE----AAREVLNSMPQKD 328
Score = 114 bits (284), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 167/400 (41%), Gaps = 49/400 (12%)
Query: 55 NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
N +++ +++ + L ++H +K D+F N L++ Y L A K+F
Sbjct: 130 NKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVF 189
Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
+ E++ +S+ + I G+ +A+ LF + E + + L + E
Sbjct: 190 TTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLE 249
Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL---------------- 218
V + + + + N + A++D ++ CG +E A+++FD +
Sbjct: 250 FGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYA 309
Query: 219 FNDCFE---EALNFFSQMRAVGF-----------KP------------------NNFTFA 246
++ +E E LN Q V + KP N T
Sbjct: 310 ISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLV 369
Query: 247 FVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKK 306
L AC + + + + H K M+ +V AL+ +Y+K G++ +R +F + K+
Sbjct: 370 STLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKR 429
Query: 307 DVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI- 365
DV WS MI A +AV++F +M++A V PN TF +V AC+ +D +
Sbjct: 430 DVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLF 489
Query: 366 HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
H + G++ + ++DV + G +E +V+ P
Sbjct: 490 HQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMP 529
Score = 40.8 bits (94), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 50/109 (45%)
Query: 53 EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
+ N + ++L +C Q L+ IH + K G ++ T+ L+++Y K L + +
Sbjct: 362 KLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSRE 421
Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFT 161
+F+ + +R+ + I G + EAV +F + + N FT
Sbjct: 422 VFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFT 470
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 442 bits (1138), Expect = e-123, Method: Compositional matrix adjust.
Identities = 252/779 (32%), Positives = 424/779 (54%), Gaps = 29/779 (3%)
Query: 55 NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
+ +++ + +++C D + ++ Q+L G DLF N L+++Y ++ L A ++F
Sbjct: 105 DKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVF 164
Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
DEMP R+ +S+ + I GY+ + EA+ ++ L + F ++ L ++ +
Sbjct: 165 DEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVK 224
Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FN------- 220
+ K G +S V L+ + AR+VFD + +N
Sbjct: 225 QGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYL 284
Query: 221 --DCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
+ EE++ F + FKP+ T + VL+AC L + +AK + LK + ++
Sbjct: 285 KLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLEST 343
Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
V L+D+Y K G++ AR +F M KD + W+ +I+ Y Q+ ++A++LF M
Sbjct: 344 VRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIME 403
Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
+ T++ ++ + L G +HS ++ G+ D+ VSNAL+D+YAKCG + +S+
Sbjct: 404 EQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSL 463
Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
++F+ + VTWNT+I V+ G+ + + ++M + +V T+ L CASLA
Sbjct: 464 KIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLA 523
Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
A G ++HC ++ Y+ ++ + NALI+MY+KCG + ++ VF+ M+ + V+W MI
Sbjct: 524 AKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIY 583
Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
Y M+G + L+ F M++ G P+++ F+ ++ ACS+ GL+++G A F+ M +Y I+
Sbjct: 584 AYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKID 643
Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQH 638
P IEHY +V LL R+ + KA + I+ +P +P IW ++L AC ++E ++
Sbjct: 644 PMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRR 703
Query: 639 ILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRA 687
I++ P+D +L SN YA R W+K + +K PG SWIE VH F +
Sbjct: 704 IIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSS 763
Query: 688 GDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDV-REDEKERYLWVHSEKLALAFA 746
GD S I LE L K GYIPD V +++ E+EK R + HSE+LA+AF
Sbjct: 764 GDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFG 823
Query: 747 LFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
L P +P++++KNLR+C DCH K+ISKIV REI++RD +RFH F+DG CSC D W
Sbjct: 824 LLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 232 bits (592), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 153/571 (26%), Positives = 287/571 (50%), Gaps = 20/571 (3%)
Query: 69 NDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM-PERNTISFVT 127
+ +L IH V+ G F + L++ Y + +F + P +N + +
Sbjct: 17 SSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNS 76
Query: 128 TIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLG 187
I+ ++ + F EA+ + L + + F + +K + AE+ V+ + +G
Sbjct: 77 IIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMG 136
Query: 188 HDSNAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFS 231
+S+ FVG AL+D +S G + AR+VFD + + +EEAL +
Sbjct: 137 FESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYH 196
Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
+++ P++FT + VL A L ++ + HG ALK+ + V L+ +Y K
Sbjct: 197 ELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFR 256
Query: 292 EISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQ 351
++ARR+F+EM +D + ++ MI Y + ++ ++V +F F P+ T SVL+
Sbjct: 257 RPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQF-KPDLLTVSSVLR 315
Query: 352 ACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVT 411
AC + L L I++ +++ G + + V N L+DVYAKCG M + ++F ++ V+
Sbjct: 316 ACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVS 375
Query: 412 WNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTV 471
WN++I GY+Q G++ +AM +F M+ + A +TY ++ LA L+ G +H +
Sbjct: 376 WNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGI 435
Query: 472 KANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLK 531
K+ +D+ V+NALIDMYAKCG + D+ +F M + V+WN +IS G A L+
Sbjct: 436 KSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQ 495
Query: 532 VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLL 591
V M++ P+ TF+ L C++ G+ ++ +G E ++ +++ +
Sbjct: 496 VTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLL-RFGYESELQIGNALIEMY 554
Query: 592 GRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
+ G L+ ++++ E + + V+ W ++ A
Sbjct: 555 SKCGCLENSSRVFERMS-RRDVVTWTGMIYA 584
Score = 212 bits (540), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 143/473 (30%), Positives = 253/473 (53%), Gaps = 24/473 (5%)
Query: 179 VFACVYKLGHDSNAFVGTALIDAFS----------VCGCVEFARKVF--DGLF-----ND 221
+ A V LG DS+ F LID +S V V A+ V+ + + N
Sbjct: 26 IHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNG 85
Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
F EAL F+ ++R P+ +TF V+KAC GL + + L +E DL+V
Sbjct: 86 LFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGN 145
Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
AL+D+Y++ G ++ AR++F+EMP +D++ W+ +I+ Y+ +A+E++ ++ +++ P
Sbjct: 146 ALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVP 205
Query: 342 NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF 401
+ FT SVL A + + G +H ++ G+ S V V+N L+ +Y K R ++ +F
Sbjct: 206 DSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVF 265
Query: 402 AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALE 461
E R+ V++NTMI GY++L V +++ MF + L++ P +T SSVLRAC L L
Sbjct: 266 DEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDL-LTVSSVLRACGHLRDLS 324
Query: 462 PGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYS 521
++ +KA + ++ V N LID+YAKCG + AR VF+ M + VSWN++ISGY
Sbjct: 325 LAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYI 384
Query: 522 MHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
G E +K+F +M + +++T++ ++S + L+ G+ + + + GI CI
Sbjct: 385 QSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKS-GI--CI 441
Query: 582 EHYTS--MVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIG 632
+ S ++ + + G + + K+ + +V W ++ AC+ + G
Sbjct: 442 DLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTV-TWNTVISACVRFGDFATG 493
Score = 156 bits (395), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 219/413 (53%), Gaps = 7/413 (1%)
Query: 247 FVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM-PK 305
F+ +A + + H + + + + L+D Y+ E +++ +F + P
Sbjct: 9 FISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPA 68
Query: 306 KDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI 365
K+V W+ +I +++ L +A+E + ++R++ V+P+++TF SV++ACA + ++G+ +
Sbjct: 69 KNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLV 128
Query: 366 HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEV 425
+ ++ +G SD+FV NAL+D+Y++ G + + ++F E P R+ V+WN++I GY G
Sbjct: 129 YEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYY 188
Query: 426 GKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANAL 485
+A+ ++ ++ + T SSVL A +L ++ G +H +K+ + VVV N L
Sbjct: 189 EEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGL 248
Query: 486 IDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNN 545
+ MY K TDAR VFD M+ + VS+N MI GY + E +++F L ++P+
Sbjct: 249 VAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF-LENLDQFKPDL 307
Query: 546 LTFVGVLSACSNGGLLEQGEAYFKSMV-ANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLI 604
LT VL AC + L + + M+ A + +E + + ++ + + G + A +
Sbjct: 308 LTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNI--LIDVYAKCGDMITARDVF 365
Query: 605 EGIPFQPSVMIWRALLGACIIHNNV-EIGRLSAQHILDFEPEDEATHVLLSNI 656
+ + +V W +++ I ++ E +L ++ E D T+++L ++
Sbjct: 366 NSMECKDTVS-WNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISV 417
Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 88/189 (46%), Gaps = 3/189 (1%)
Query: 443 TEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVF 502
T V+ + RA +S + L ++H L + D + LID Y+ + VF
Sbjct: 3 TRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVF 62
Query: 503 DMMNDWNEVS-WNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLL 561
++ V WN++I +S +GL E L+ + +++ P+ TF V+ AC+
Sbjct: 63 RRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDA 122
Query: 562 EQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLG 621
E G+ ++ ++ + G E + ++V + R G L +A ++ + +P + ++ W +L+
Sbjct: 123 EMGDLVYEQIL-DMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR-DLVSWNSLIS 180
Query: 622 ACIIHNNVE 630
H E
Sbjct: 181 GYSSHGYYE 189
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 441 bits (1135), Expect = e-122, Method: Compositional matrix adjust.
Identities = 254/778 (32%), Positives = 420/778 (53%), Gaps = 31/778 (3%)
Query: 58 SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
S+ L++C + D+++ +H ++K G F N L+++Y K + L A +LFD
Sbjct: 184 SFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGF 243
Query: 118 PER-NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELC 176
E+ + + + + + Y+ S + +E + LF +H G N + + L +A+L
Sbjct: 244 QEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLG 303
Query: 177 PCVFACVYKLG-HDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND-------------- 221
+ A V K H S +V ALI ++ CG + A ++ + N
Sbjct: 304 KEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQ 363
Query: 222 --CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
++EAL FFS M A G K + + ++ A L + H +K ++ +L V
Sbjct: 364 NLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQV 423
Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
L+D+Y+K R F M KD+I W+ +IA YAQ D ++A+ELF + + +
Sbjct: 424 GNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRM 483
Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
++ S+L+A + ++ + + +IH ++R GLL D + N L+DVY KC M +
Sbjct: 484 EIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL-DTVIQNELVDVYGKCRNMGYATR 542
Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
+F ++ V+W +MI G +A+ +F +M+E + A V +L A ASL+A
Sbjct: 543 VFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSA 602
Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
L G ++HC ++ + ++ +A A++DMYA CG + A+ VFD + + + +MI+
Sbjct: 603 LNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINA 662
Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
Y MHG +++FD M+ P++++F+ +L ACS+ GLL++G + K M Y +EP
Sbjct: 663 YGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEP 722
Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHI 639
EHY +V +LGRA + +A + ++ + +P+ +W ALL AC H+ EIG ++AQ +
Sbjct: 723 WPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRL 782
Query: 640 LDFEPEDEATHVLLSNIYAMARSWE---------KAAS--KEPGLSWIENQGMVHYFRAG 688
L+ EP++ VL+SN++A W KA+ K PG SWIE G VH F A
Sbjct: 783 LELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTAR 842
Query: 689 DTSHADMNIIRGMLEWLNMK-SRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFAL 747
D SH + I L + K R+ GY+ D VL +V E EK + L HSE++A+A+ L
Sbjct: 843 DKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGL 902
Query: 748 FKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
+ P + +RI KNLR+C DCHT K++SK+ +R+I++RD +RFHHF+ G CSCGD W
Sbjct: 903 LRTPDRACLRITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960
Score = 224 bits (572), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 144/522 (27%), Positives = 258/522 (49%), Gaps = 22/522 (4%)
Query: 49 FSVSEFNS--HSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDL-FATNVLLNVYVKLN 105
VSE NS ++A L+ C + + +H ++ K +L F L+ +Y K
Sbjct: 71 LDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCG 130
Query: 106 RLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLK 165
L DA K+FDEMP+R ++ T I Y + + A+ L+ + EG L +F A LK
Sbjct: 131 SLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLK 190
Query: 166 VLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG-------- 217
+ + + + KLG+ S F+ AL+ ++ + AR++FDG
Sbjct: 191 ACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAV 250
Query: 218 LFNDCFE---------EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCA 268
L+N E L F +M G PN++T L AC G ++ K H
Sbjct: 251 LWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASV 310
Query: 269 LK-TCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDA 327
LK + + +LYV AL+ +YT+ G++ A RI +M DV+ W+ +I Y Q + +A
Sbjct: 311 LKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEA 370
Query: 328 VELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDV 387
+E F M A ++ + S++ A + L G ++H+ V++ G S++ V N L+D+
Sbjct: 371 LEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDM 430
Query: 388 YAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTY 447
Y+KC F ++ ++W T+I GY Q +A+ +F + ++++ E+
Sbjct: 431 YSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMIL 490
Query: 448 SSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMND 507
S+LRA + L ++ ++HC ++ +D V+ N L+D+Y KC ++ A VF+ +
Sbjct: 491 GSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKG 549
Query: 508 WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFV 549
+ VSW +MIS +++G +E +++F M + G +++ +
Sbjct: 550 KDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALL 591
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 173/347 (49%), Gaps = 18/347 (5%)
Query: 215 FDGLFNDCFEEALNFFSQMRAVGFKPNNF---TFAFVLKACLGLDTIRVAKSAHGCALKT 271
FDG+ + F+ + NN FA+VL+ C + + H KT
Sbjct: 60 FDGVLTEAFQR----------LDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKT 109
Query: 272 --CYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVE 329
+E+D ++A L+ +Y K G + +A ++F+EMP + W+ MI Y A+
Sbjct: 110 FPSFELD-FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALA 168
Query: 330 LFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYA 389
L+ MR V +F ++L+ACA + + G+++HSL+V++G S F+ NAL+ +YA
Sbjct: 169 LYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYA 228
Query: 390 KCGRMENSVELF-AESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYS 448
K + + LF K + V WN+++ Y G+ + + +F +M T
Sbjct: 229 KNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIV 288
Query: 449 SVLRACASLAALEPGMQVHCLTVKAN-YDMDVVVANALIDMYAKCGSITDARLVFDMMND 507
S L AC + + G ++H +K++ + ++ V NALI MY +CG + A + MN+
Sbjct: 289 SALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNN 348
Query: 508 WNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSA 554
+ V+WN++I GY + + E L+ F M G + + ++ +++A
Sbjct: 349 ADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 144/277 (51%), Gaps = 3/277 (1%)
Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDV-FVSNALMDVYAKCGRMENSVELFAES 404
F VL+ C + G Q+HS + + ++ F++ L+ +Y KCG ++++ ++F E
Sbjct: 83 FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEM 142
Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
P R WNTMI YV GE A+ ++ M E VP ++ ++L+ACA L + G
Sbjct: 143 PDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGS 202
Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE-VSWNAMISGYSMH 523
++H L VK Y + NAL+ MYAK ++ AR +FD + + V WN+++S YS
Sbjct: 203 ELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTS 262
Query: 524 GLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEH 583
G S E L++F M G PN+ T V L+AC + G+ S++ + +
Sbjct: 263 GKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYV 322
Query: 584 YTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
+++++ R G + +A +++ + V+ W +L+
Sbjct: 323 CNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLI 358
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 440 bits (1132), Expect = e-122, Method: Compositional matrix adjust.
Identities = 246/722 (34%), Positives = 379/722 (52%), Gaps = 97/722 (13%)
Query: 181 ACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFN----------------DCFE 224
A + K G ++ ++ LI ++S C A V + + F
Sbjct: 39 ARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFT 98
Query: 225 EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
+++ FS+M + G P++ + K C L +V K H + + +MD +V ++
Sbjct: 99 QSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMF 158
Query: 285 DLYTKSGEISNARRIFEEMPKKDVI----------------------------------- 309
+Y + G + +AR++F+ M KDV+
Sbjct: 159 HMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIV 218
Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
W+ +++ + ++ +AV +F ++ P+Q T SVL + E L++G IH V
Sbjct: 219 SWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYV 278
Query: 370 VRVGLLSDVFVSNALMDVYAKCGR-------------MENSV------------------ 398
++ GLL D V +A++D+Y K G ME V
Sbjct: 279 IKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKAL 338
Query: 399 ---ELFAESP-KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
ELF E + N V+W ++I G Q G+ +A+ +F +M V VT S+L AC
Sbjct: 339 EMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPAC 398
Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
++AAL G H V+ + +V V +ALIDMYAKCG I +++VF+MM N V WN
Sbjct: 399 GNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWN 458
Query: 515 AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
++++G+SMHG + EV+ +F+ + + +P+ ++F +LSAC GL ++G YFK M
Sbjct: 459 SLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEE 518
Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRL 634
YGI+P +EHY+ MV+LLGRAG L +A LI+ +PF+P +W ALL +C + NNV++ +
Sbjct: 519 YGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEI 578
Query: 635 SAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVH 683
+A+ + EPE+ T+VLLSNIYA W + S K PG SWI+ + V+
Sbjct: 579 AAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVY 638
Query: 684 YFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLAL 743
AGD SH ++ I ++ ++ + RK+G+ P+L L DV E E+E+ LW HSEKLA+
Sbjct: 639 TLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAV 698
Query: 744 AFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGD 803
F L P +P+++IKNLRIC DCH IK IS REI IRD +RFHHF+DG CSCGD
Sbjct: 699 VFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGD 758
Query: 804 FW 805
FW
Sbjct: 759 FW 760
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/502 (21%), Positives = 206/502 (41%), Gaps = 89/502 (17%)
Query: 55 NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
+SH + C + + IHC G +D F + ++Y++ R+ DA K+F
Sbjct: 115 DSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVF 174
Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
D M +++ ++ + Y E V + S + G E N ++ L G+ +
Sbjct: 175 DRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHK 234
Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMR 234
+F ++ LG
Sbjct: 235 EAVVMFQKIHHLG----------------------------------------------- 247
Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
F P+ T + VL + + + + + HG +K D V A++D+Y KSG +
Sbjct: 248 ---FCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVY 304
Query: 295 NARRIF-----------------------------------EEMPKKDVIPWSFMIARYA 319
+F E+ + +V+ W+ +IA A
Sbjct: 305 GIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCA 364
Query: 320 QTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVF 379
Q I+A+ELF M+ A V PN T S+L AC + L G H VRV LL +V
Sbjct: 365 QNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVH 424
Query: 380 VSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ 439
V +AL+D+YAKCGR+ S +F P +N V WN+++ G+ G+ + M +F ++ +
Sbjct: 425 VGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTR 484
Query: 440 VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITD 497
+ ++++S+L AC + + G + + + Y + + + ++++ + G + +
Sbjct: 485 LKPDFISFTSLLSACGQVGLTDEGWKYFKM-MSEEYGIKPRLEHYSCMVNLLGRAGKLQE 543
Query: 498 A-RLVFDMMNDWNEVSWNAMIS 518
A L+ +M + + W A+++
Sbjct: 544 AYDLIKEMPFEPDSCVWGALLN 565
Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 168/370 (45%), Gaps = 41/370 (11%)
Query: 264 AHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDL 323
AH LK+ + D Y++ L+ Y+ ++A + + +P + +S +I + L
Sbjct: 37 AHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKL 96
Query: 324 SIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNA 383
++ +F RM + P+ ++ + CA + +G QIH + GL D FV +
Sbjct: 97 FTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGS 156
Query: 384 LMDVYAKCGRMENSVELFAESPKR-----------------------------------N 408
+ +Y +CGRM ++ ++F + N
Sbjct: 157 MFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEAN 216
Query: 409 HVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHC 468
V+WN ++ G+ + G +A++MF K+ +VT SSVL + L G +H
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHG 276
Query: 469 LTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAE 528
+K D V +A+IDMY K G + +F+ NA I+G S +GL +
Sbjct: 277 YVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDK 336
Query: 529 VLKVFDLMQQRGWRPNNLTFVGVLSACS-NGGLLEQGEAYFKSMVANYGIEPCIEHYTSM 587
L++F+L +++ N +++ +++ C+ NG +E E + + VA G++P ++ ++
Sbjct: 337 ALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVA--GVKP---NHVTI 391
Query: 588 VSLLGRAGHL 597
S+L G++
Sbjct: 392 PSMLPACGNI 401
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 131/261 (50%), Gaps = 2/261 (0%)
Query: 364 QIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLG 423
Q H+ +++ G +D ++S L+ Y+ ++ + P +++++I +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 424 EVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN 483
+++ +FS+M + ++ + CA L+A + G Q+HC++ + DMD V
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 484 ALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRP 543
++ MY +CG + DAR VFD M+D + V+ +A++ Y+ G EV+++ M+ G
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 544 NNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKL 603
N +++ G+LS + G ++ F+ + + G P +S++ +G + L+ +L
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQK-IHHLGFCPDQVTVSSVLPSVGDSEMLN-MGRL 273
Query: 604 IEGIPFQPSVMIWRALLGACI 624
I G + ++ + ++ A I
Sbjct: 274 IHGYVIKQGLLKDKCVISAMI 294
>sp|Q9LSL8|PP446_ARATH Pentatricopeptide repeat-containing protein At5g65570
OS=Arabidopsis thaliana GN=PCMP-H47 PE=2 SV=1
Length = 738
Score = 438 bits (1127), Expect = e-122, Method: Compositional matrix adjust.
Identities = 241/640 (37%), Positives = 363/640 (56%), Gaps = 32/640 (5%)
Query: 195 GTALIDAFSVCGCVEFARKVFDGL-------FNDCF---------EEALNFFSQMRAVGF 238
G+ L+DA CG +++AR+VFDG+ +N +EA+ + M
Sbjct: 102 GSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNV 161
Query: 239 KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM-DLYVAVALLDLYTKSGEISNAR 297
P+ +T + V KA L + A+ +HG A+ E+ +++V AL+D+Y K G+ A+
Sbjct: 162 LPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAK 221
Query: 298 RIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATME 357
+ + + +KDV+ + +I Y+Q +AV+ F M V PN++T+ SVL +C ++
Sbjct: 222 LVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLK 281
Query: 358 GLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIV 417
+ G IH L+V+ G S + +L+ +Y +C +++S+ +F N V+W ++I
Sbjct: 282 DIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLIS 341
Query: 418 GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM 477
G VQ G A+I F KM+ + + T SS LR C++LA E G Q+H + K +D
Sbjct: 342 GLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDR 401
Query: 478 DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQ 537
D + LID+Y KCG ARLVFD +++ + +S N MI Y+ +G E L +F+ M
Sbjct: 402 DKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMI 461
Query: 538 QRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHL 597
G +PN++T + VL AC+N L+E+G F S + I +HY MV LLGRAG L
Sbjct: 462 NLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRL 520
Query: 598 DKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIY 657
++A L + P +++WR LL AC +H VE+ + IL+ EP DE T +L+SN+Y
Sbjct: 521 EEAEMLTTEV-INPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLY 579
Query: 658 AMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDT-SHADMNIIRGMLEWL 705
A W + K P +SW+E H F AGD SH + I LE L
Sbjct: 580 ASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEEL 639
Query: 706 NMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRIC 765
KS+ GY+ D S V +D+ E KER L HSEKLA+AFA+++ S IRI+KNLR+C
Sbjct: 640 IKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWRNVGGS-IRILKNLRVC 698
Query: 766 VDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
VDCH+ IKI+S++++REII RD RFHHF+DG CSCGD+W
Sbjct: 699 VDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 155 bits (393), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 116/489 (23%), Positives = 225/489 (46%), Gaps = 26/489 (5%)
Query: 56 SHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFD 115
+H+++ L+ CI + TI +LK G ++ + L++ +K + A ++FD
Sbjct: 65 THNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEISGSK-LVDASLKCGDIDYARQVFD 123
Query: 116 EMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAEL 175
M ER+ +++ + I + EAV ++ + + + ++ K + +
Sbjct: 124 GMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKE 183
Query: 176 CPCVFACVYKLGHD-SNAFVGTALIDAFSVCGCVEFARKVFDGL--------------FN 220
LG + SN FVG+AL+D + G A+ V D + ++
Sbjct: 184 AQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYS 243
Query: 221 DCFE--EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
E EA+ F M +PN +T+A VL +C L I K HG +K+ +E L
Sbjct: 244 QKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALA 303
Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAF 338
+LL +Y + + ++ R+F+ + + + W+ +I+ Q A+ F +M +
Sbjct: 304 SQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDS 363
Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
+ PN FT S L+ C+ + + G QIH +V + G D + + L+D+Y KCG + +
Sbjct: 364 IKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMAR 423
Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
+F + + ++ NTMI Y Q G +A+ +F +M+ + +VT SVL AC +
Sbjct: 424 LVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSR 483
Query: 459 ALEPGMQVHCLTVKANYDMDVVVAN----ALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
+E G C + +++ N ++D+ + G + +A ++ + + + V W
Sbjct: 484 LVEEG----CELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWR 539
Query: 515 AMISGYSMH 523
++S +H
Sbjct: 540 TLLSACKVH 548
Score = 126 bits (317), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 174/380 (45%), Gaps = 31/380 (8%)
Query: 90 DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
++F + L+++YVK + +A + D + E++ + I GY+ + EAV F ++
Sbjct: 200 NVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSML 259
Query: 150 REGHELNPFAFTAFL---KVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALI------- 199
E + N + + + L L +G +L + + K G +S T+L+
Sbjct: 260 VEKVQPNEYTYASVLISCGNLKDIGNGKL---IHGLMVKSGFESALASQTSLLTMYLRCS 316
Query: 200 ---DAFSVCGCVEFARKV-----FDGLFNDCFEE-ALNFFSQMRAVGFKPNNFTFAFVLK 250
D+ V C+E+ +V GL + EE AL F +M KPN+FT + L+
Sbjct: 317 LVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALR 376
Query: 251 ACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIP 310
C L + HG K ++ D Y L+DLY K G AR +F+ + + DVI
Sbjct: 377 GCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVIS 436
Query: 311 WSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATM----EGLDLGNQIH 366
+ MI YAQ +A++LF RM + PN T +SVL AC EG +L +
Sbjct: 437 LNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFR 496
Query: 367 SLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVG 426
++ L +D + ++D+ + GR+E + L E + V W T++ +V
Sbjct: 497 K--DKIMLTNDHYA--CMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACKVHRKVE 552
Query: 427 KAMIMFSKMLEEQVPATEVT 446
A + K+LE + P E T
Sbjct: 553 MAERITRKILEIE-PGDEGT 571
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 129/283 (45%), Gaps = 26/283 (9%)
Query: 55 NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
N ++YA+ L SC D+ IH ++K G L + LL +Y++ + + D+ ++F
Sbjct: 266 NEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVF 325
Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
+ N +S+ + I G + + A+ F + R+ + N F ++ L+ ++ E
Sbjct: 326 KCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFE 385
Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF--------------- 219
+ V K G D + + G+ LID + CGC + AR VFD L
Sbjct: 386 EGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYA 445
Query: 220 -NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
N EAL+ F +M +G +PN+ T VL AC + R+ + GC L + D
Sbjct: 446 QNGFGREALDLFERMINLGLQPNDVTVLSVLLAC---NNSRLVE--EGCELFDSFRKDKI 500
Query: 279 VAV-----ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIA 316
+ ++DL ++G + A + E+ D++ W +++
Sbjct: 501 MLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLS 543
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 442 ATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLV 501
T +S +LR C ++ + +K+ + ++ + L+D KCG I AR V
Sbjct: 63 TTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEIS-GSKLVDASLKCGDIDYARQV 121
Query: 502 FDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLL 561
FD M++ + V+WN++I+ H S E ++++ LM P+ T V A S+ L
Sbjct: 122 FDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLE 181
Query: 562 EQGE 565
++ +
Sbjct: 182 KEAQ 185
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 431 bits (1109), Expect = e-120, Method: Compositional matrix adjust.
Identities = 231/681 (33%), Positives = 372/681 (54%), Gaps = 35/681 (5%)
Query: 160 FTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL- 218
+ L+V G ++ V + K G N LID + C A KVFD +
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 219 ---------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKS 263
N + +L+ FS+M G PN FTF+ LKAC L+ +
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 264 AHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDL 323
HG LK +EM + V +L+D+Y+K G I+ A ++F + + +I W+ MIA +
Sbjct: 129 IHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGY 188
Query: 324 SIDAVELFCRMRQAFVA--PNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGL--LSDVF 379
A++ F M++A + P++FT S+L+AC++ + G QIH +VR G S
Sbjct: 189 GSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSAT 248
Query: 380 VSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQ 439
++ +L+D+Y KCG + ++ + F + ++ ++W+++I+GY Q GE +AM +F ++ E
Sbjct: 249 ITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELN 308
Query: 440 VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR 499
SS++ A A L G Q+ L VK ++ V N+++DMY KCG + +A
Sbjct: 309 SQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAE 368
Query: 500 LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGG 559
F M + +SW +I+GY HGL + +++F M + P+ + ++ VLSACS+ G
Sbjct: 369 KCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSG 428
Query: 560 LLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRAL 619
++++GE F ++ +GI+P +EHY +V LLGRAG L +A LI+ +P +P+V IW+ L
Sbjct: 429 MIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTL 488
Query: 620 LGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWE-----------KAAS 668
L C +H ++E+G+ + +L + ++ A +V++SN+Y A W K
Sbjct: 489 LSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLK 548
Query: 669 KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKA-GYIPDLSAVLRDVRE 727
KE G+SW+E + VH+FR+G+ SH +I+ L+ + R+ GY+ L L D+ +
Sbjct: 549 KEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDD 608
Query: 728 DEKERYLWVHSEKLALAFALFKM---PPSSPIRIIKNLRICVDCHTAIKIISKIVQREII 784
+ KE L HSEKLA+ AL IR+ KNLR+CVDCH IK +SKI + +
Sbjct: 609 ESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYV 668
Query: 785 IRDVHRFHHFQDGCCSCGDFW 805
+RD RFH F+DGCCSCGD+W
Sbjct: 669 VRDAVRFHSFEDGCCSCGDYW 689
Score = 203 bits (516), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 136/496 (27%), Positives = 243/496 (48%), Gaps = 25/496 (5%)
Query: 63 LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
L+ C + +HC +LK G+ L+L +N L+++Y K A K+FD MPERN
Sbjct: 13 LRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNV 72
Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
+S+ + G+ ++ ++ LFS + R+G N F F+ LK + E +
Sbjct: 73 VSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGF 132
Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF----------------EEA 226
K+G + VG +L+D +S CG + A KVF + + +A
Sbjct: 133 CLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKA 192
Query: 227 LNFFSQMRAVGFK--PNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE--MDLYVAVA 282
L+ F M+ K P+ FT +LKAC I K HG +++ + + +
Sbjct: 193 LDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGS 252
Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
L+DLY K G + +AR+ F+++ +K +I WS +I YAQ ++A+ LF R+++ +
Sbjct: 253 LVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQID 312
Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
F S++ A L G Q+ +L V++ + V N+++D+Y KCG ++ + + FA
Sbjct: 313 SFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFA 372
Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
E ++ ++W +I GY + G K++ +F +ML + EV Y +VL AC+ ++
Sbjct: 373 EMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKE 432
Query: 463 GMQVHCLTVKANYDMDVVVANA-LIDMYAKCGSITDARLVFDMMNDWNEVS-WNAMISGY 520
G ++ ++ + V A ++D+ + G + +A+ + D M V W ++S
Sbjct: 433 GEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLC 492
Query: 521 SMHG---LSAEVLKVF 533
+HG L EV K+
Sbjct: 493 RVHGDIELGKEVGKIL 508
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 165/285 (57%), Gaps = 7/285 (2%)
Query: 341 PNQF-TFVSVLQACATMEGL-DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
PNQ VS+L+ C T +GL D G Q+H +++ G ++ SN L+D+Y KC +
Sbjct: 3 PNQRQNLVSILRVC-TRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAY 61
Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
++F P+RN V+W+ ++ G+V G++ ++ +FS+M + + E T+S+ L+AC L
Sbjct: 62 KVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLN 121
Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
ALE G+Q+H +K ++M V V N+L+DMY+KCG I +A VF + D + +SWNAMI+
Sbjct: 122 ALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIA 181
Query: 519 GYSMHGLSAEVLKVFDLMQQRGW--RPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
G+ G ++ L F +MQ+ RP+ T +L ACS+ G++ G+ +V +
Sbjct: 182 GFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGF 241
Query: 577 IEPCIEHYT-SMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALL 620
P T S+V L + G+L A K + I + +++ W +L+
Sbjct: 242 HCPSSATITGSLVDLYVKCGYLFSARKAFDQIK-EKTMISWSSLI 285
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 198/424 (46%), Gaps = 32/424 (7%)
Query: 55 NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
N +++T+L++C + L+ + IH LK G + + N L+++Y K R+ +A K+F
Sbjct: 106 NEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVF 165
Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNP--FAFTAFLKVLVSMGW 172
+ +R+ IS+ I G+ + +A+ F + + P F T+ LK S G
Sbjct: 166 RRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGM 225
Query: 173 AELCPCVFACVYKLGHD--SNAFVGTALIDAFSVCGCVEFARKVFDGLFNDC-------- 222
+ + + G S+A + +L+D + CG + ARK FD +
Sbjct: 226 IYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLI 285
Query: 223 --------FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYE 274
F EA+ F +++ + + ++F + ++ +R K A+K
Sbjct: 286 LGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSG 345
Query: 275 MDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRM 334
++ V +++D+Y K G + A + F EM KDVI W+ +I Y + L +V +F M
Sbjct: 346 LETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEM 405
Query: 335 RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV-GLLSDVFVSNALMDVYAKCGR 393
+ + P++ +++VL AC+ + G ++ S ++ G+ V ++D+ + GR
Sbjct: 406 LRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGR 465
Query: 394 MENSVELFAESP-KRNHVTWNTMIV-----GYVQLG-EVGKAMIMFSKMLEEQVPATEVT 446
++ + L P K N W T++ G ++LG EVGK ++ ++ + PA V
Sbjct: 466 LKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILL----RIDAKNPANYVM 521
Query: 447 YSSV 450
S++
Sbjct: 522 MSNL 525
Score = 97.1 bits (240), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 94/187 (50%), Gaps = 3/187 (1%)
Query: 440 VPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDAR 499
+P S+LR C + G QVHC +K+ ++++ +N LIDMY KC A
Sbjct: 2 IPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAY 61
Query: 500 LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGG 559
VFD M + N VSW+A++SG+ ++G L +F M ++G PN TF L AC
Sbjct: 62 KVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLN 121
Query: 560 LLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRAL 619
LE+G G E +E S+V + + G +++A K+ I S++ W A+
Sbjct: 122 ALEKG-LQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWNAM 179
Query: 620 LGACIIH 626
+ A +H
Sbjct: 180 I-AGFVH 185
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 426 bits (1096), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/600 (37%), Positives = 342/600 (57%), Gaps = 19/600 (3%)
Query: 219 FNDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
+ F E+++ + M G P+ F+F F+LK+C L + H K E + +
Sbjct: 30 YQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPF 89
Query: 279 VAVALLDLYTKSGEISNARRIFEEMPKKDVIP--WSFMIARYAQTDLSIDAVELFCRMRQ 336
V AL+ +Y K G +++AR++FEE P+ + ++ +I+ Y DA +F RM++
Sbjct: 90 VLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKE 149
Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
V+ + T + ++ C E L LG +H V+ GL S+V V N+ + +Y KCG +E
Sbjct: 150 TGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEA 209
Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
LF E P + +TWN +I GY Q G + ++ +M V T SVL +CA
Sbjct: 210 GRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAH 269
Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
L A + G +V L + +V V+NA I MYA+CG++ AR VFD+M + VSW AM
Sbjct: 270 LGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAM 329
Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
I Y MHG+ L +FD M +RG RP+ FV VLSACS+ GL ++G F++M Y
Sbjct: 330 IGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYK 389
Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
+EP EHY+ +V LLGRAG LD+A + IE +P +P +W ALLGAC IH NV++ L+
Sbjct: 390 LEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAF 449
Query: 637 QHILDFEPEDEATHVLLSNIYAMARS----W-------EKAASKEPGLSWIENQGMVHYF 685
+++FEP + +VL+SNIY+ +++ W E+A K+PG S++E++G VH F
Sbjct: 450 AKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLF 509
Query: 686 RAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAF 745
AGD SH + ML+ L + +L+ + R +E HSE+LA+AF
Sbjct: 510 LAGDRSHEQTEEVHRMLDELETS------VMELAGNMDCDRGEEVSSTTREHSERLAIAF 563
Query: 746 ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
+ P + I +IKNLR+C DCH +K +SKIV R+ ++RD RFH+F+DG CSC D+W
Sbjct: 564 GILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 177 bits (448), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 178/325 (54%), Gaps = 4/325 (1%)
Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
PW+ + A L +++ L+ M ++ +P+ F+F +L++CA++ G Q+H V
Sbjct: 20 PWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHV 79
Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNH--VTWNTMIVGYVQLGEVGK 427
+ G ++ FV AL+ +Y KCG + ++ ++F E+P+ + V +N +I GY +V
Sbjct: 80 TKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 428 AMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALID 487
A MF +M E V VT ++ C L G +H VK D +V V N+ I
Sbjct: 140 AAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFIT 199
Query: 488 MYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLT 547
MY KCGS+ R +FD M ++WNA+ISGYS +GL+ +VL++++ M+ G P+ T
Sbjct: 200 MYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFT 259
Query: 548 FVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGI 607
V VLS+C++ G + G K +V + G P + + +S+ R G+L KA + + +
Sbjct: 260 LVSVLSSCAHLGAKKIGHEVGK-LVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIM 318
Query: 608 PFQPSVMIWRALLGACIIHNNVEIG 632
P + S++ W A++G +H EIG
Sbjct: 319 PVK-SLVSWTAMIGCYGMHGMGEIG 342
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 189/436 (43%), Gaps = 23/436 (5%)
Query: 22 NAWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQ 81
N LR L+ Q+ S S S + S S ++ S+ L+SC + +HC
Sbjct: 22 NVRLRELAYQSLFSE---SISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCH 78
Query: 82 VLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTIS--FVTTIQGYTVSSQFV 139
V K G + F L+++Y K + DA K+F+E P+ + +S + I GYT +S+
Sbjct: 79 VTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVT 138
Query: 140 EAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALI 199
+A +F + G ++ + + + L + K G DS V + I
Sbjct: 139 DAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFI 198
Query: 200 DAFSVCGCVEFARKVFD-----GLF-----------NDCFEEALNFFSQMRAVGFKPNNF 243
+ CG VE R++FD GL N + L + QM++ G P+ F
Sbjct: 199 TMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPF 258
Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
T VL +C L ++ + +++V+ A + +Y + G ++ AR +F+ M
Sbjct: 259 TLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIM 318
Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
P K ++ W+ MI Y + + LF M + + P+ FV VL AC+ D G
Sbjct: 319 PVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGL 378
Query: 364 QIHSLVVR-VGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMIVGYVQ 421
++ + R L + L+D+ + GR++ ++E P + + W ++
Sbjct: 379 ELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKI 438
Query: 422 LGEVGKAMIMFSKMLE 437
V A + F+K++E
Sbjct: 439 HKNVDMAELAFAKVIE 454
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 420 bits (1079), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/625 (36%), Positives = 342/625 (54%), Gaps = 48/625 (7%)
Query: 229 FFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYT 288
F+ ++R VG + + F+F +LKA + + HG A K D +V +D+Y
Sbjct: 98 FYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYA 157
Query: 289 KSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVS 348
G I+ AR +F+EM +DV+ W+ MI RY + L +A +LF M+ + V P++ +
Sbjct: 158 SCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCN 217
Query: 349 VLQACATMEGLDLGNQIHSLVV-------------------------------RVGLLSD 377
++ AC + I+ ++ R + +
Sbjct: 218 IVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRN 277
Query: 378 VFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
+FVS A++ Y+KCGR++++ +F ++ K++ V W TMI YV+ +A+ +F +M
Sbjct: 278 LFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCC 337
Query: 438 EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITD 497
+ V+ SV+ ACA+L L+ VH + ++ + NALI+MYAKCG +
Sbjct: 338 SGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDA 397
Query: 498 ARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSN 557
R VF+ M N VSW++MI+ SMHG +++ L +F M+Q PN +TFVGVL CS+
Sbjct: 398 TRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSH 457
Query: 558 GGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWR 617
GL+E+G+ F SM Y I P +EHY MV L GRA L +A ++IE +P +V+IW
Sbjct: 458 SGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWG 517
Query: 618 ALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKA 666
+L+ AC IH +E+G+ +A+ IL+ EP+ + VL+SNIYA + W EK
Sbjct: 518 SLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKN 577
Query: 667 ASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVR 726
KE GLS I+ G H F GD H N I L+ + K + AGY+PD +VL DV
Sbjct: 578 VFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVE 637
Query: 727 EDEKERYLWVHSEKLALAFALFKMPPSSP------IRIIKNLRICVDCHTAIKIISKIVQ 780
E+EK+ + HSEKLAL F L IRI+KNLR+C DCH K++SK+ +
Sbjct: 638 EEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYE 697
Query: 781 REIIIRDVHRFHHFQDGCCSCGDFW 805
REII+RD RFH +++G CSC D+W
Sbjct: 698 REIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 167 bits (422), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 218/465 (46%), Gaps = 50/465 (10%)
Query: 110 ATKLFDEMPER-NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLV 168
A +F +P +I F ++ + SS+ + + + G L+ F+F LK +
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122
Query: 169 SMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-------FND 221
+ + +K+ + FV T +D ++ CG + +AR VFD + +N
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182
Query: 222 CFE---------EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC 272
E EA F +M+ P+ ++ AC +R ++ + ++
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND 242
Query: 273 YEMD-------------------------------LYVAVALLDLYTKSGEISNARRIFE 301
MD L+V+ A++ Y+K G + +A+ IF+
Sbjct: 243 VRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFD 302
Query: 302 EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL 361
+ KKD++ W+ MI+ Y ++D +A+ +F M + + P+ + SV+ ACA + LD
Sbjct: 303 QTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDK 362
Query: 362 GNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQ 421
+HS + GL S++ ++NAL+++YAKCG ++ + ++F + P+RN V+W++MI
Sbjct: 363 AKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSM 422
Query: 422 LGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHC-LTVKANYDMDVV 480
GE A+ +F++M +E V EVT+ VL C+ +E G ++ +T + N +
Sbjct: 423 HGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLE 482
Query: 481 VANALIDMYAKCGSITDARLVFDMMN-DWNEVSWNAMISGYSMHG 524
++D++ + + +A V + M N V W +++S +HG
Sbjct: 483 HYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHG 527
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 53/119 (44%)
Query: 63 LQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNT 122
+ +C L A +H + G +L N L+N+Y K L +F++MP RN
Sbjct: 351 ISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNV 410
Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFA 181
+S+ + I ++ + +A+ LF+ + +E E N F L G E +FA
Sbjct: 411 VSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFA 469
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 419 bits (1077), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/527 (38%), Positives = 318/527 (60%), Gaps = 14/527 (2%)
Query: 293 ISNARRIFEEMPKK-DVIPWSFMIARYAQTDLSIDAVELFCRMR-QAFVAPNQFTFVSVL 350
+S A ++F ++ K +V W+ +I YA+ SI A L+ MR V P+ T+ ++
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 351 QACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHV 410
+A TM + LG IHS+V+R G S ++V N+L+ +YA CG + ++ ++F + P+++ V
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188
Query: 411 TWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLT 470
WN++I G+ + G+ +A+ ++++M + + T S+L ACA + AL G +VH
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM 248
Query: 471 VKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVL 530
+K ++ +N L+D+YA+CG + +A+ +FD M D N VSW ++I G +++G E +
Sbjct: 249 IKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAI 308
Query: 531 KVFDLMQQ-RGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVS 589
++F M+ G P +TFVG+L ACS+ G++++G YF+ M Y IEP IEH+ MV
Sbjct: 309 ELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVD 368
Query: 590 LLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEAT 649
LL RAG + KA + I+ +P QP+V+IWR LLGAC +H + ++ + IL EP
Sbjct: 369 LLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGD 428
Query: 650 HVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADMNII 698
+VLLSN+YA + W K PG S +E VH F GD SH + I
Sbjct: 429 YVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAI 488
Query: 699 RGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRI 758
L+ + + R GY+P +S V DV E+EKE + HSEK+A+AF L P SPI +
Sbjct: 489 YAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITV 548
Query: 759 IKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
+KNLR+C DCH AIK++SK+ REI++RD RFHHF++G CSC D+W
Sbjct: 549 VKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 170 bits (431), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 180/326 (55%), Gaps = 10/326 (3%)
Query: 226 ALNFFSQMRAVGF-KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALL 284
A + + +MR G +P+ T+ F++KA + +R+ ++ H +++ + +YV +LL
Sbjct: 104 AFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLL 163
Query: 285 DLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQF 344
LY G++++A ++F++MP+KD++ W+ +I +A+ +A+ L+ M + P+ F
Sbjct: 164 HLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGF 223
Query: 345 TFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAES 404
T VS+L ACA + L LG ++H +++VGL ++ SN L+D+YA+CGR+E + LF E
Sbjct: 224 TIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM 283
Query: 405 PKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE--EQVPATEVTYSSVLRACASLAALEP 462
+N V+W ++IVG G GK I K +E E + E+T+ +L AC+ ++
Sbjct: 284 VDKNSVSWTSLIVGLAVNG-FGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKE 342
Query: 463 GMQVHCLTVKANYDMDVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISG 519
G + + ++ Y ++ + + ++D+ A+ G + A + M N V W ++
Sbjct: 343 GFE-YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGA 401
Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNN 545
++HG S L F +Q PN+
Sbjct: 402 CTVHGDSD--LAEFARIQILQLEPNH 425
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 150/331 (45%), Gaps = 27/331 (8%)
Query: 110 ATKLFDEMPER-NTISFVTTIQGYTVSSQFVEAVGLFSTLHREGH-ELNPFAFTAFLKVL 167
A K+F ++ + N + T I+GY + A L+ + G E + + +K +
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 168 VSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF-------- 219
+M L + + V + G S +V +L+ ++ CG V A KVFD +
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 220 --------NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKT 271
N EEAL +++M + G KP+ FT +L AC + + + K H +K
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251
Query: 272 CYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELF 331
+L+ + LLDLY + G + A+ +F+EM K+ + W+ +I A +A+ELF
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 311
Query: 332 CRMRQA-FVAPNQFTFVSVLQACA----TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMD 386
M + P + TFV +L AC+ EG + ++ + + ++D
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMRE---EYKIEPRIEHFGCMVD 368
Query: 387 VYAKCGRMENSVELFAESP-KRNHVTWNTMI 416
+ A+ G+++ + E P + N V W T++
Sbjct: 369 LLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 399
Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 147/314 (46%), Gaps = 29/314 (9%)
Query: 53 EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
E ++H+Y +++ D++ TIH V++ G ++ N LL++Y + A K
Sbjct: 118 EPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYK 177
Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
+FD+MPE++ +++ + I G+ + + EA+ L++ ++ +G + + F + L +G
Sbjct: 178 VFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGA 237
Query: 173 AELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD---------------G 217
L V + K+G N L+D ++ CG VE A+ +FD G
Sbjct: 238 LTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVG 297
Query: 218 LFNDCF-EEALNFFSQMRAV-GFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM 275
L + F +EA+ F M + G P TF +L AC ++ + ++ Y++
Sbjct: 298 LAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEG-FEYFRRMREEYKI 356
Query: 276 DLYVA--VALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIAR---YAQTDLSIDAVE 329
+ + ++DL ++G++ A + MP + +V+ W ++ + +DL+
Sbjct: 357 EPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA----- 411
Query: 330 LFCRMRQAFVAPNQ 343
F R++ + PN
Sbjct: 412 EFARIQILQLEPNH 425
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 418 bits (1075), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/535 (39%), Positives = 317/535 (59%), Gaps = 12/535 (2%)
Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
L++ Y ++G++ NAR++F+EMP + + W+ MIA Q + + + + LF M +P+
Sbjct: 116 LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPD 175
Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
++T SV A + + +G QIH ++ GL D+ V+++L +Y + G++++ +
Sbjct: 176 EYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIR 235
Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
P RN V WNT+I+G Q G + ++ M ++T+ +VL +C+ LA
Sbjct: 236 SMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQ 295
Query: 463 GMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSM 522
G Q+H +K V V ++LI MY+KCG + DA F D +EV W++MIS Y
Sbjct: 296 GQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGF 355
Query: 523 HGLSAEVLKVFDLM-QQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCI 581
HG E +++F+ M +Q N + F+ +L ACS+ GL ++G F MV YG +P +
Sbjct: 356 HGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGL 415
Query: 582 EHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILD 641
+HYT +V LLGRAG LD+A +I +P + ++IW+ LL AC IH N E+ + + IL
Sbjct: 416 KHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ 475
Query: 642 FEPEDEATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDT 690
+P D A +VLL+N++A A+ W +K KE G+SW E++G VH F+ GD
Sbjct: 476 IDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDR 535
Query: 691 SHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKM 750
S + I L+ L ++ + GY PD ++VL D+ E+EKE L HSEKLA+AFAL +
Sbjct: 536 SQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMIL 595
Query: 751 PPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
P +PIRIIKNLR+C DCH A K IS I REI +RD RFHHF +G CSCGD+W
Sbjct: 596 PEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 650
Score = 166 bits (419), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 116/487 (23%), Positives = 221/487 (45%), Gaps = 57/487 (11%)
Query: 55 NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
N+ + +QSC L + +HC ++ G D F N L+++Y KL P A ++
Sbjct: 43 NTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVY 102
Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
M ++N +S I GY + V A +F E+ T +
Sbjct: 103 GRMRKKNYMSSNILINGYVRAGDLVNARKVFD-------EMPDRKLTTW----------- 144
Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMR 234
NA + G ++F FN EE L+ F +M
Sbjct: 145 ----------------NAMIA----------GLIQFE-------FN---EEGLSLFREMH 168
Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
+GF P+ +T V GL ++ + + HG +K E+DL V +L +Y ++G++
Sbjct: 169 GLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQ 228
Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
+ + MP ++++ W+ +I AQ + L+ M+ + PN+ TFV+VL +C+
Sbjct: 229 DGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCS 288
Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
+ G QIH+ +++G S V V ++L+ +Y+KCG + ++ + F+E + V W++
Sbjct: 289 DLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSS 348
Query: 415 MIVGYVQLGEVGKAMIMFSKMLEE-QVPATEVTYSSVLRACASLAALEPGMQVHCLTV-K 472
MI Y G+ +A+ +F+ M E+ + EV + ++L AC+ + G+++ + V K
Sbjct: 349 MISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEK 408
Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNE-VSWNAMISGYSMHGLSAEVLK 531
+ + ++D+ + G + A + M + V W ++S ++H + +
Sbjct: 409 YGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQR 468
Query: 532 VFDLMQQ 538
VF + Q
Sbjct: 469 VFKEILQ 475
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 160/347 (46%), Gaps = 45/347 (12%)
Query: 323 LSID---AVELFC---RMRQAF------VAPNQFTFVSVLQACATMEGLDLGNQIHSLVV 370
LS+D A+ C +R+AF + N F +Q+C T + L G Q+H L+V
Sbjct: 12 LSVDPATAIATLCSKGNLREAFQRFRLNIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLV 71
Query: 371 RVGLLSDVFVSNALMDVYAKCG----------RME---------------------NSVE 399
G SD F+ N LM +Y+K G RM N+ +
Sbjct: 72 VSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARK 131
Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
+F E P R TWN MI G +Q + + +F +M E T SV A L +
Sbjct: 132 VFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRS 191
Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
+ G Q+H T+K ++D+VV ++L MY + G + D +V M N V+WN +I G
Sbjct: 192 VSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMG 251
Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
+ +G VL ++ +M+ G RPN +TFV VLS+CS+ + QG+ + G
Sbjct: 252 NAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAI-KIGASS 310
Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIH 626
+ +S++S+ + G L AAK + VM W +++ A H
Sbjct: 311 VVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVM-WSSMISAYGFH 356
>sp|Q9FK93|PP406_ARATH Pentatricopeptide repeat-containing protein At5g39680
OS=Arabidopsis thaliana GN=EMB2744 PE=2 SV=1
Length = 710
Score = 418 bits (1075), Expect = e-116, Method: Compositional matrix adjust.
Identities = 232/643 (36%), Positives = 352/643 (54%), Gaps = 28/643 (4%)
Query: 191 NAFVGTALIDAFSVCGCVEFARKVFD---------------GLFNDCFE-EALNFFSQMR 234
+A+ +LI+ + C ARK+FD G N F+ E L F M
Sbjct: 68 DAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMF 127
Query: 235 AVG-FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEI 293
G +PN F V K+C I K HGC LK +V L+ +Y+
Sbjct: 128 FSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGN 187
Query: 294 SNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQAC 353
A R+ +++P D+ +S ++ Y + + +++ + N T++S L+
Sbjct: 188 GEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLF 247
Query: 354 ATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWN 413
+ + L+L Q+HS +VR G ++V AL+++Y KCG++ + +F ++ +N
Sbjct: 248 SNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNT 307
Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKA 473
T++ Y Q +A+ +FSKM ++VP E T++ +L + A L+ L+ G +H L +K+
Sbjct: 308 TIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKS 367
Query: 474 NYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVF 533
Y V+V NAL++MYAK GSI DAR F M + V+WN MISG S HGL E L+ F
Sbjct: 368 GYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAF 427
Query: 534 DLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGR 593
D M G PN +TF+GVL ACS+ G +EQG YF ++ + ++P I+HYT +V LL +
Sbjct: 428 DRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSK 487
Query: 594 AGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLL 653
AG A + P + V+ WR LL AC + N +G+ A++ ++ P D +VLL
Sbjct: 488 AGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLL 547
Query: 654 SNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGML 702
SNI+A +R WE + KEPG+SWI + H F A D H ++ +I +
Sbjct: 548 SNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKV 607
Query: 703 EWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNL 762
+ + K + GY PD++ DV E+++E L HSEKLA+A+ L K P SP+ + KN+
Sbjct: 608 KEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNV 667
Query: 763 RICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
RIC DCH+AIK+ISKI +R I+IRD +RFHHF DG CSC D+W
Sbjct: 668 RICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 182 bits (463), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 144/546 (26%), Positives = 254/546 (46%), Gaps = 32/546 (5%)
Query: 63 LQSCIQNDDLQTAMTIHCQVL---KKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPE 119
L+ C + L+ +IH ++ + D + N L+N+YVK A KLFD MPE
Sbjct: 38 LKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPE 97
Query: 120 RNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHEL-NPFAFTAFLKVLVSMGWAELCPC 178
RN +S+ ++GY S E + LF ++ G N F T K + G E
Sbjct: 98 RNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQ 157
Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL--------------FNDC-- 222
C K G S+ FV L+ +S+C A +V D L + +C
Sbjct: 158 FHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGA 217
Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
F+E L+ + F NN T+ L+ L + +A H ++ + ++ A
Sbjct: 218 FKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGA 277
Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
L+++Y K G++ A+R+F++ +++ + ++ Y Q +A+ LF +M V PN
Sbjct: 278 LINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPN 337
Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
++TF +L + A + L G+ +H LV++ G + V V NAL+++YAK G +E++ + F+
Sbjct: 338 EYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFS 397
Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
R+ VTWNTMI G G +A+ F +M+ +T+ VL+AC+ + +E
Sbjct: 398 GMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQ 457
Query: 463 GMQ-VHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN----DWNEVSWNAMI 517
G+ + L K + D+ ++ + +K G DA D M +W+ V+W ++
Sbjct: 458 GLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAE---DFMRTAPIEWDVVAWRTLL 514
Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
+ + KV + ++ PN+ +LS +G A +S++ N G+
Sbjct: 515 NACYVRRNYRLGKKVAEYAIEK--YPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGV 572
Query: 578 --EPCI 581
EP +
Sbjct: 573 KKEPGV 578
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 124/280 (44%), Gaps = 18/280 (6%)
Query: 54 FNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKL 113
+N+ +Y +SL+ DL A+ +H ++++ G ++ A L+N+Y K ++ A ++
Sbjct: 235 WNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRV 294
Query: 114 FDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWA 173
FD+ +N T + Y F EA+ LFS + + N + F L + +
Sbjct: 295 FDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLL 354
Query: 174 ELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL-FNDCF--------- 223
+ + V K G+ ++ VG AL++ ++ G +E ARK F G+ F D
Sbjct: 355 KQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGC 414
Query: 224 ------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTC-YEMD 276
EAL F +M G PN TF VL+AC + + +K + D
Sbjct: 415 SHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPD 474
Query: 277 LYVAVALLDLYTKSGEISNARRIFEEMPKK-DVIPWSFMI 315
+ ++ L +K+G +A P + DV+ W ++
Sbjct: 475 IQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLL 514
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 417 bits (1071), Expect = e-115, Method: Compositional matrix adjust.
Identities = 237/614 (38%), Positives = 346/614 (56%), Gaps = 67/614 (10%)
Query: 257 TIRVAKSAHGCALKTCYEMDLYVAVALL------DLYTKSGEISNARRIFEEMPKKDVIP 310
TIR H +K+ D A +L DL+ + ++ A +IF +MP+++
Sbjct: 35 TIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHR--DLDYAHKIFNQMPQRNCFS 92
Query: 311 WSFMIARYAQTD--LSIDAVELFCRM-RQAFVAPNQFTFVSVLQACATMEGLDLGNQIHS 367
W+ +I ++++D ++ A+ LF M FV PN+FTF SVL+ACA + G QIH
Sbjct: 93 WNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHG 152
Query: 368 LVVRVGLLSDVFVSNALMDVYAKCGRMENSVELF------------AESPKRNH--VTWN 413
L ++ G D FV + L+ +Y CG M+++ LF + KR+ V WN
Sbjct: 153 LALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWN 212
Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQV-----------------PATEV----------- 445
MI GY++LG+ A ++F KM + V A EV
Sbjct: 213 VMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRP 272
Query: 446 ---TYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVF 502
T SVL A + L +LE G +H + +D V+ +ALIDMY+KCG I A VF
Sbjct: 273 NYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVF 332
Query: 503 DMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLE 562
+ + N ++W+AMI+G+++HG + + + F M+Q G RP+++ ++ +L+ACS+GGL+E
Sbjct: 333 ERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVE 392
Query: 563 QGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
+G YF MV+ G+EP IEHY MV LLGR+G LD+A + I +P +P +IW+ALLGA
Sbjct: 393 EGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGA 452
Query: 623 CIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW-----------EKAASKEP 671
C + NVE+G+ A ++D P D +V LSN+YA +W EK K+P
Sbjct: 453 CRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDP 512
Query: 672 GLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKE 731
G S I+ G++H F D SH I ML ++ K R AGY P + VL ++ E++KE
Sbjct: 513 GCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKE 572
Query: 732 RYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRF 791
L HSEK+A AF L P PIRI+KNLRIC DCH++IK+ISK+ +R+I +RD RF
Sbjct: 573 NVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRF 632
Query: 792 HHFQDGCCSCGDFW 805
HHFQDG CSC D+W
Sbjct: 633 HHFQDGSCSCMDYW 646
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 162/347 (46%), Gaps = 48/347 (13%)
Query: 226 ALNFFSQMRAVGF-KPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVAL- 283
A+ F +M + F +PN FTF VLKAC I+ K HG ALK + D +V L
Sbjct: 111 AITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLV 170
Query: 284 --------------------------------------------LDLYTKSGEISNARRI 299
+D Y + G+ AR +
Sbjct: 171 RMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARML 230
Query: 300 FEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGL 359
F++M ++ V+ W+ MI+ Y+ DAVE+F M++ + PN T VSVL A + + L
Sbjct: 231 FDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSL 290
Query: 360 DLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGY 419
+LG +H G+ D + +AL+D+Y+KCG +E ++ +F P+ N +TW+ MI G+
Sbjct: 291 ELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGF 350
Query: 420 VQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN-YDMD 478
G+ G A+ F KM + V ++V Y ++L AC+ +E G + V + +
Sbjct: 351 AIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPR 410
Query: 479 VVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMHG 524
+ ++D+ + G + +A + +M ++V W A++ M G
Sbjct: 411 IEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQG 457
Score = 124 bits (310), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 108/451 (23%), Positives = 189/451 (41%), Gaps = 75/451 (16%)
Query: 78 IHCQVLKKGNCLDLFATNVLLNVYVKLN----RLPDATKLFDEMPERNTISFVTTIQGYT 133
IH +K G D A +L + L A K+F++MP+RN S+ T I+G++
Sbjct: 42 IHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFS 101
Query: 134 VSSQ---FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDS 190
S + + + + E E N F F + LK G + + K G
Sbjct: 102 ESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGG 161
Query: 191 NAFVGTALIDAFSVCGCVE----------------------------------------- 209
+ FV + L+ + +CG ++
Sbjct: 162 DEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRL 221
Query: 210 ----FARKVFDGL----------------FNDCFEEALNFFSQMRAVGFKPNNFTFAFVL 249
AR +FD + N F++A+ F +M+ +PN T VL
Sbjct: 222 GDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVL 281
Query: 250 KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
A L ++ + + H A + +D + AL+D+Y+K G I A +FE +P+++VI
Sbjct: 282 PAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVI 341
Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
WS MI +A + DA++ FC+MRQA V P+ ++++L AC+ ++ G + S +
Sbjct: 342 TWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQM 401
Query: 370 VRV-GLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMIVGYVQLG--EV 425
V V GL + ++D+ + G ++ + E P K + V W ++ G E+
Sbjct: 402 VSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEM 461
Query: 426 GKAMIMFSKMLEEQVPATEVTYSSVLRACAS 456
GK + + +L + VP Y ++ AS
Sbjct: 462 GKRV---ANILMDMVPHDSGAYVALSNMYAS 489
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 416 bits (1068), Expect = e-115, Method: Compositional matrix adjust.
Identities = 262/830 (31%), Positives = 422/830 (50%), Gaps = 68/830 (8%)
Query: 40 SNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLN 99
+ +TT P + S+ + + +SL++C D+L+ H + K+G D+ L+
Sbjct: 17 TTTTTKPSLLNQSKC-TKATPSSLKNCKTIDELKM---FHRSLTKQGLDNDVSTITKLVA 72
Query: 100 VYVKLN---RLPDATKLFDEMPERNT-ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHEL 155
+L L A ++F+ T + + I+GY S EA+ LF + G
Sbjct: 73 RSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISP 132
Query: 156 NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF 215
+ + F L + + K+G+ + FV +L+ ++ CG ++ ARKVF
Sbjct: 133 DKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVF 192
Query: 216 DGLFN----------------DCFEEALN-FFSQMRAVGFKPNNFTFAFVLKACLGLDTI 258
D + D ++A++ FF +R PN+ T V+ AC L+ +
Sbjct: 193 DEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDL 252
Query: 259 RVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARY 318
+ + + E++ + AL+D+Y K I A+R+F+E ++ + M + Y
Sbjct: 253 ETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNY 312
Query: 319 AQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDV 378
+ L+ +A+ +F M + V P++ + +S + +C+ + + G H V+R G S
Sbjct: 313 VRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWD 372
Query: 379 FVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE- 437
+ NAL+D+Y KC R + + +F + VTWN+++ GYV+ GEV A F M E
Sbjct: 373 NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEK 432
Query: 438 -------------------------------EQVPATEVTYSSVLRACASLAALEPGMQV 466
E V A VT S+ AC L AL+ +
Sbjct: 433 NIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWI 492
Query: 467 HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLS 526
+ K +DV + L+DM+++CG A +F+ + + + +W A I +M G +
Sbjct: 493 YYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNA 552
Query: 527 AEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTS 586
+++FD M ++G +P+ + FVG L+ACS+GGL++QG+ F SM+ +G+ P HY
Sbjct: 553 ERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGC 612
Query: 587 MVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPED 646
MV LLGRAG L++A +LIE +P +P+ +IW +LL AC + NVE+ +A+ I PE
Sbjct: 613 MVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPER 672
Query: 647 EATHVLLSNIYAMARSW-----------EKAASKEPGLSWIENQGMVHYFRAGDTSHADM 695
++VLLSN+YA A W EK K PG S I+ +G H F +GD SH +M
Sbjct: 673 TGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEM 732
Query: 696 NIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMPPSSP 755
I ML+ ++ ++ G++PDLS VL DV E EK L HSEKLA+A+ L +
Sbjct: 733 PNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTT 792
Query: 756 IRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
IRI+KNLR+C DCH+ K SK+ REII+RD +RFH+ + G CSCGDFW
Sbjct: 793 IRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 413 bits (1062), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/563 (38%), Positives = 328/563 (58%), Gaps = 48/563 (8%)
Query: 287 YTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTF 346
Y G+I ++ +F + D+ ++ I + L A L+ ++ + + PN+FTF
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133
Query: 347 VSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPK 406
S+L++C+T G IH+ V++ GL D +V+ L+DVYAK G + ++ ++F P+
Sbjct: 134 SSLLKSCSTKSG----KLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPE 189
Query: 407 R-------------------------------NHVTWNTMIVGYVQLGEVGKAMIMFSKM 435
R + V+WN MI GY Q G A+++F K+
Sbjct: 190 RSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL 249
Query: 436 LEEQVPAT-EVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGS 494
L E P E+T + L AC+ + ALE G +H + ++V V LIDMY+KCGS
Sbjct: 250 LAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGS 309
Query: 495 ITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQ-RGWRPNNLTFVGVLS 553
+ +A LVF+ + V+WNAMI+GY+MHG S + L++F+ MQ G +P ++TF+G L
Sbjct: 310 LEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQ 369
Query: 554 ACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSV 613
AC++ GL+ +G F+SM YGI+P IEHY +VSLLGRAG L +A + I+ +
Sbjct: 370 ACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADS 429
Query: 614 MIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS----- 668
++W ++LG+C +H + +G+ A++++ ++ +VLLSNIYA +E A
Sbjct: 430 VLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLM 489
Query: 669 ------KEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVL 722
KEPG+S IE + VH FRAGD H+ I ML ++ + + GY+P+ + VL
Sbjct: 490 KEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVL 549
Query: 723 RDVREDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQRE 782
+D+ E EKE+ L VHSE+LA+A+ L P SP++I KNLR+C DCHT K+ISKI R+
Sbjct: 550 QDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRK 609
Query: 783 IIIRDVHRFHHFQDGCCSCGDFW 805
I++RD +RFHHF DG CSCGDFW
Sbjct: 610 IVMRDRNRFHHFTDGSCSCGDFW 632
Score = 146 bits (369), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 174/371 (46%), Gaps = 54/371 (14%)
Query: 189 DSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFV 248
D + F+ TA I+ S+ N ++A + Q+ + PN FTF+ +
Sbjct: 92 DPDLFLFTAAINTASI---------------NGLKDQAFLLYVQLLSSEINPNEFTFSSL 136
Query: 249 LKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP---- 304
LK+C + + K H LK +D YVA L+D+Y K G++ +A+++F+ MP
Sbjct: 137 LKSC----STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSL 192
Query: 305 ---------------------------KKDVIPWSFMIARYAQTDLSIDAVELFCR-MRQ 336
++D++ W+ MI YAQ DA+ LF + + +
Sbjct: 193 VSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAE 252
Query: 337 AFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMEN 396
P++ T V+ L AC+ + L+ G IH V + +V V L+D+Y+KCG +E
Sbjct: 253 GKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEE 312
Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE-EQVPATEVTYSSVLRACA 455
+V +F ++P+++ V WN MI GY G A+ +F++M + T++T+ L+ACA
Sbjct: 313 AVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACA 372
Query: 456 SLAALEPGMQV-HCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMN-DWNEVSW 513
+ G+++ + + + L+ + + G + A MN D + V W
Sbjct: 373 HAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLW 432
Query: 514 NAMISGYSMHG 524
++++ +HG
Sbjct: 433 SSVLGSCKLHG 443
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 155/387 (40%), Gaps = 61/387 (15%)
Query: 68 QNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNV-----YVKLNRLPDATKLFDEMPERNT 122
++ + + IH +L+ L L +LN+ Y ++ + LF + + +
Sbjct: 38 KSQSVDEVLQIHAAILRHN--LLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDL 95
Query: 123 ISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFAC 182
F I +++ +A L+ L N F F++ LK + +
Sbjct: 96 FLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKSGK----LIHTH 151
Query: 183 VYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-------------------------- 216
V K G + +V T L+D ++ G V A+KVFD
Sbjct: 152 VLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAA 211
Query: 217 -GLFNDCFE--------------------EALNFFSQMRAVGF-KPNNFTFAFVLKACLG 254
LF+ E +AL F ++ A G KP+ T L AC
Sbjct: 212 RALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQ 271
Query: 255 LDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFM 314
+ + + H + +++ V L+D+Y+K G + A +F + P+KD++ W+ M
Sbjct: 272 IGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAM 331
Query: 315 IARYAQTDLSIDAVELFCRMRQ-AFVAPNQFTFVSVLQACATMEGLDLGNQI-HSLVVRV 372
IA YA S DA+ LF M+ + P TF+ LQACA ++ G +I S+
Sbjct: 332 IAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEY 391
Query: 373 GLLSDVFVSNALMDVYAKCGRMENSVE 399
G+ + L+ + + G+++ + E
Sbjct: 392 GIKPKIEHYGCLVSLLGRAGQLKRAYE 418
Score = 66.6 bits (161), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 140/348 (40%), Gaps = 69/348 (19%)
Query: 23 AWLRGLSAQAALSTQQCSNSTTTPITFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQV 82
A + GL QA L Q +S P N ++++ L+SC ++ IH V
Sbjct: 105 ASINGLKDQAFLLYVQLLSSEINP--------NEFTFSSLLKSC----STKSGKLIHTHV 152
Query: 83 LKKGNCLDLFATNVLLNVYVK----------LNRLPD---------------------AT 111
LK G +D + L++VY K +R+P+ A
Sbjct: 153 LKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAAR 212
Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGH-ELNPFAFTAFLKVLVSM 170
LFD M ER+ +S+ I GY +A+ LF L EG + + A L +
Sbjct: 213 ALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQI 272
Query: 171 GWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL------------ 218
G E + V N V T LID +S CG +E A VF+
Sbjct: 273 GALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMI 332
Query: 219 ----FNDCFEEALNFFSQMRAV-GFKPNNFTFAFVLKAC--LGL--DTIRVAKSAHGCAL 269
+ ++AL F++M+ + G +P + TF L+AC GL + IR+ +S G
Sbjct: 333 AGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESM-GQEY 391
Query: 270 KTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIA 316
+++ Y L+ L ++G++ A + M D + WS ++
Sbjct: 392 GIKPKIEHY--GCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLG 437
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 410 bits (1055), Expect = e-113, Method: Compositional matrix adjust.
Identities = 242/737 (32%), Positives = 385/737 (52%), Gaps = 31/737 (4%)
Query: 95 NVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLF-STLHREGH 153
N L ++V+ L DA +F +M ERN S+ + GY F EA+ L+ L G
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 154 ELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARK 213
+ + + F L+ + V V + G++ + V ALI + CG V+ AR
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 214 VFD---------------GLF-NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDT 257
+FD G F N E L F MR + P+ T V+ AC L
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGD 312
Query: 258 IRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIAR 317
R+ + H + T + +D+ V +L +Y +G A ++F M +KD++ W+ MI+
Sbjct: 313 RRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 372
Query: 318 YAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSD 377
Y L A++ + M Q V P++ T +VL ACAT+ LD G ++H L ++ L+S
Sbjct: 373 YEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY 432
Query: 378 VFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLE 437
V V+N L+++Y+KC ++ ++++F P++N ++W ++I G ++L ++F + ++
Sbjct: 433 VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAG-LRLNNRCFEALIFLRQMK 491
Query: 438 EQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITD 497
+ +T ++ L ACA + AL G ++H ++ +D + NAL+DMY +CG +
Sbjct: 492 MTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNT 551
Query: 498 ARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSN 557
A F+ + SWN +++GYS G + V+++FD M + RP+ +TF+ +L CS
Sbjct: 552 AWSQFNSQKK-DVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSK 610
Query: 558 GGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWR 617
++ QG YF M +YG+ P ++HY +V LLGRAG L +A K I+ +P P +W
Sbjct: 611 SQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWG 669
Query: 618 ALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAAS-----KEPG 672
ALL AC IH+ +++G LSAQHI + + + ++LL N+YA W + A KE G
Sbjct: 670 ALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENG 729
Query: 673 L------SWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVR 726
L SW+E +G VH F + D H I +LE K + G + D
Sbjct: 730 LTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDET 789
Query: 727 EDEKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIR 786
E ++ HSE+ A+AF L P PI + KNL +C +CH +K ISK V+REI +R
Sbjct: 790 EISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVR 849
Query: 787 DVHRFHHFQDGCCSCGD 803
D FHHF+DG CSCGD
Sbjct: 850 DAEHFHHFKDGECSCGD 866
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 201/409 (49%), Gaps = 3/409 (0%)
Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
N EEA+ + M+ + + F +++ C + AL + + + +
Sbjct: 72 NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVEL 131
Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQ-AF 338
A L ++ + G + +A +F +M ++++ W+ ++ YA+ +A+ L+ RM
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191
Query: 339 VAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
V P+ +TF VL+ C + L G ++H VVR G D+ V NAL+ +Y KCG ++++
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251
Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLA 458
LF P+R+ ++WN MI GY + G + + +F M V +T +SV+ AC L
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311
Query: 459 ALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMIS 518
G +H + + +D+ V N+L MY GS +A +F M + VSW MIS
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMIS 371
Query: 519 GYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
GY + L + + + +M Q +P+ +T VLSAC+ G L+ G K + I
Sbjct: 372 GYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLIS 431
Query: 579 PCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHN 627
I +++++ + +DKA + IP + +V+ W +++ ++N
Sbjct: 432 YVIVA-NNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLRLNN 478
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 410 bits (1053), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/600 (35%), Positives = 346/600 (57%), Gaps = 21/600 (3%)
Query: 223 FEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
++A+ SQ + P+ T+ ++ C ++ A H L + D ++A
Sbjct: 62 LKQAIRVLSQESS----PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATK 117
Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
L+ +Y+ G + AR++F++ K+ + W+ + + + L+ +M + V +
Sbjct: 118 LIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESD 177
Query: 343 QFTFVSVLQACA----TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSV 398
+FT+ VL+AC T+ L G +IH+ + R G S V++ L+D+YA+ G ++ +
Sbjct: 178 RFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYAS 237
Query: 399 ELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPAT--EVTYSSVLRACAS 456
+F P RN V+W+ MI Y + G+ +A+ F +M+ E ++ VT SVL+ACAS
Sbjct: 238 YVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACAS 297
Query: 457 LAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAM 516
LAALE G +H ++ D + V +AL+ MY +CG + + VFD M+D + VSWN++
Sbjct: 298 LAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSL 357
Query: 517 ISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYG 576
IS Y +HG + +++F+ M G P +TFV VL ACS+ GL+E+G+ F++M ++G
Sbjct: 358 ISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHG 417
Query: 577 IEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSA 636
I+P IEHY MV LLGRA LD+AAK+++ + +P +W +LLG+C IH NVE+ ++
Sbjct: 418 IKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERAS 477
Query: 637 QHILDFEPEDEATHVLLSNIYAMARSWE-----------KAASKEPGLSWIENQGMVHYF 685
+ + EP++ +VLL++IYA A+ W+ + K PG W+E + ++ F
Sbjct: 478 RRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSF 537
Query: 686 RAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAF 745
+ D + M I L L ++ GYIP VL ++ +EKER + HSEKLALAF
Sbjct: 538 VSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAF 597
Query: 746 ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
L PIRI KNLR+C DCH K ISK +++EI++RDV+RFH F++G CSCGD+W
Sbjct: 598 GLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 181/410 (44%), Gaps = 45/410 (10%)
Query: 52 SEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDAT 111
S + +Y + C L A+ +H +L G+ D F L+ +Y L + A
Sbjct: 73 SSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYAR 132
Query: 112 KLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVS-- 169
K+FD+ +R + + T++ E +GL+ ++R G E + F +T LK V+
Sbjct: 133 KVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASE 192
Query: 170 ------MGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGL----- 218
M E + A + + G+ S+ ++ T L+D ++ GCV++A VF G+
Sbjct: 193 CTVNHLMKGKE----IHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNV 248
Query: 219 ------------FNDCFEEALNFFSQMRAV-GFKPNNFTFAFVLKACLGLDTIRVAKSAH 265
FE F MR PN+ T VL+AC L + K H
Sbjct: 249 VSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIH 308
Query: 266 GCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSI 325
G L+ + L V AL+ +Y + G++ +R+F+ M +DV+ W+ +I+ Y
Sbjct: 309 GYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGK 368
Query: 326 DAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRV-GLLSDVFVSNAL 384
A+++F M +P TFVSVL AC+ ++ G ++ + R G+ + +
Sbjct: 369 KAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACM 428
Query: 385 MDVYAKCGRMENSVELFAE-----SPKRNHVTWNTM-----IVGYVQLGE 424
+D+ + R++ + ++ + PK W ++ I G V+L E
Sbjct: 429 VDLLGRANRLDEAAKMVQDMRTEPGPK----VWGSLLGSCRIHGNVELAE 474
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 107/224 (47%), Gaps = 13/224 (5%)
Query: 410 VTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCL 469
++ N +I + G++ +A+ ++L ++ ++ TY ++ C ++L ++VH
Sbjct: 47 ISNNQLIQSLCKEGKLKQAI----RVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 470 TVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEV 529
+ D D +A LI MY+ GS+ AR VFD WNA+ ++ G EV
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 530 LKVFDLMQQRGWRPNNLTFVGVLSA-----CSNGGLLEQGEAYFKSMVANYGIEPCIEHY 584
L ++ M + G + T+ VL A C+ L++ E + + + G +
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIH--AHLTRRGYSSHVYIM 220
Query: 585 TSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNN 628
T++V + R G +D A+ + G+P + +V+ W A++ AC N
Sbjct: 221 TTLVDMYARFGCVDYASYVFGGMPVR-NVVSWSAMI-ACYAKNG 262
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 409 bits (1052), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/597 (36%), Positives = 334/597 (55%), Gaps = 11/597 (1%)
Query: 220 NDCFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYV 279
N F E L+ F +R G + FTF VLKAC + ++ H +K + D+
Sbjct: 89 NHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAA 148
Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
+LL +Y+ SG +++A ++F+E+P + V+ W+ + + Y + +A++LF +M + V
Sbjct: 149 MTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGV 208
Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVE 399
P+ + V VL AC + LD G I + + + + FV L+++YAKCG+ME +
Sbjct: 209 KPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARS 268
Query: 400 LFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAA 459
+F +++ VTW+TMI GY + + +F +ML+E + + + L +CASL A
Sbjct: 269 VFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGA 328
Query: 460 LEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISG 519
L+ G L + + ++ +ANALIDMYAKCG++ VF M + + V NA ISG
Sbjct: 329 LDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISG 388
Query: 520 YSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEP 579
+ +G VF ++ G P+ TF+G+L C + GL++ G +F ++ Y ++
Sbjct: 389 LAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKR 448
Query: 580 CIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHI 639
+EHY MV L GRAG LD A +LI +P +P+ ++W ALL C + + ++ + +
Sbjct: 449 TVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKEL 508
Query: 640 LDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAG 688
+ EP + +V LSNIY++ W++AA K PG SWIE +G VH F A
Sbjct: 509 IALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLAD 568
Query: 689 DTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALF 748
D SH + I LE L + R G++P V DV E+EKER L HSEKLA+A L
Sbjct: 569 DKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLI 628
Query: 749 KMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
IR++KNLR+C DCH +K+ISKI +REI++RD +RFH F +G CSC D+W
Sbjct: 629 STDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 142/527 (26%), Positives = 251/527 (47%), Gaps = 36/527 (6%)
Query: 78 IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
IH ++ D F N+LL + + + LF N + + I G+ +
Sbjct: 32 IHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHL 91
Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
F E + LF ++ + G L+ F F LK +L + + V K G + + T+
Sbjct: 92 FHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTS 151
Query: 198 LIDAFSVCGCVEFARKVFD-----------GLFNDC-----FEEALNFFSQMRAVGFKPN 241
L+ +S G + A K+FD LF+ EA++ F +M +G KP+
Sbjct: 152 LLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPD 211
Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDL----YVAVALLDLYTKSGEISNAR 297
++ VL AC+ + + + +K EM++ +V L++LY K G++ AR
Sbjct: 212 SYFIVQVLSACVHVGDLDSGE----WIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKAR 267
Query: 298 RIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATME 357
+F+ M +KD++ WS MI YA + +ELF +M Q + P+QF+ V L +CA++
Sbjct: 268 SVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLG 327
Query: 358 GLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIV 417
LDLG SL+ R L+++F++NAL+D+YAKCG M E+F E +++ V N I
Sbjct: 328 ALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAIS 387
Query: 418 GYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDM 477
G + G V + +F + + + T+ +L C ++ G++ + Y +
Sbjct: 388 GLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFN-AISCVYAL 446
Query: 478 DVVVAN--ALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSM---HGLSAEVLK 531
V + ++D++ + G + DA RL+ DM N + W A++SG + L+ VLK
Sbjct: 447 KRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLK 506
Query: 532 VFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIE 578
+L+ W N +V + + S GG ++ A + M+ G++
Sbjct: 507 --ELIALEPWNAGN--YVQLSNIYSVGGRWDEA-AEVRDMMNKKGMK 548
Score = 139 bits (350), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 179/382 (46%), Gaps = 24/382 (6%)
Query: 58 SYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEM 117
++ L++C + + + +H V+K G D+ A LL++Y RL DA KLFDE+
Sbjct: 113 TFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEI 172
Query: 118 PERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCP 177
P+R+ +++ GYT S + EA+ LF + G + + + L V +G +
Sbjct: 173 PDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGE 232
Query: 178 CVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF----------------ND 221
+ + ++ N+FV T L++ ++ CG +E AR VFD + N
Sbjct: 233 WIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNS 292
Query: 222 CFEEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
+E + F QM KP+ F+ L +C L + + + + + +L++A
Sbjct: 293 FPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMAN 352
Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAP 341
AL+D+Y K G ++ +F+EM +KD++ + I+ A+ + +F + + ++P
Sbjct: 353 ALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISP 412
Query: 342 NQFTFVSVLQACA----TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENS 397
+ TF+ +L C +GL N I + L V ++D++ + G ++++
Sbjct: 413 DGSTFLGLLCGCVHAGLIQDGLRFFNAISCV---YALKRTVEHYGCMVDLWGRAGMLDDA 469
Query: 398 VELFAESPKR-NHVTWNTMIVG 418
L + P R N + W ++ G
Sbjct: 470 YRLICDMPMRPNAIVWGALLSG 491
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 408 bits (1049), Expect = e-113, Method: Compositional matrix adjust.
Identities = 235/647 (36%), Positives = 345/647 (53%), Gaps = 65/647 (10%)
Query: 191 NAFVGTALIDAFSVCGCVEFARKVFDGL----------------FNDCFEEALNFFSQMR 234
N+ +G L+ A++ V ARKVFD + N + E + F M
Sbjct: 73 NSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMC 132
Query: 235 AVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEIS 294
+P+++TF VLKAC TI + + HG A K L+V L+ +Y K G +S
Sbjct: 133 GCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLS 192
Query: 295 NARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACA 354
AR + +EM ++DV+ W+ ++ YAQ DA+E+ M ++ + T S+L A
Sbjct: 193 EARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA-- 250
Query: 355 TMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNT 414
+S+ N + Y K ++F + K++ V+WN
Sbjct: 251 --------------------VSNTTTENVM---YVK--------DMFFKMGKKSLVSWNV 279
Query: 415 MIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKAN 474
MI Y++ +A+ ++S+M + V+ +SVL AC +AL G ++H +
Sbjct: 280 MIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKK 339
Query: 475 YDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
++++ NALIDMYAKCG + AR VF+ M + VSW AMIS Y G + + +F
Sbjct: 340 LIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFS 399
Query: 535 LMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRA 594
+Q G P+++ FV L+ACS+ GLLE+G + FK M +Y I P +EH MV LLGRA
Sbjct: 400 KLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRA 459
Query: 595 GHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLS 654
G + +A + I+ + +P+ +W ALLGAC +H++ +IG L+A + PE +VLLS
Sbjct: 460 GKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLS 519
Query: 655 NIYAMARSWE-----------KAASKEPGLSWIENQGMVHYFRAGDTSHADMNIIRGMLE 703
NIYA A WE K K PG S +E ++H F GD SH + I L+
Sbjct: 520 NIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELD 579
Query: 704 WLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAFALFKMP-----PSSPIRI 758
L K ++ GY+PD + L DV E++KE +L VHSEKLA+ FAL ++ IRI
Sbjct: 580 VLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRI 639
Query: 759 IKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
KNLRIC DCH A K+IS+I REIIIRD +RFH F+ G CSCGD+W
Sbjct: 640 TKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/457 (26%), Positives = 215/457 (47%), Gaps = 23/457 (5%)
Query: 71 DLQTAMTIHCQV-LKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTI 129
D++T T+H ++ L+ C L+ Y L + A K+FDE+PERN I I
Sbjct: 54 DIRTLRTVHSRIILEDLRCNSSLGVK-LMRAYASLKDVASARKVFDEIPERNVIIINVMI 112
Query: 130 QGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHD 189
+ Y + + E V +F T+ + + F LK G + + K+G
Sbjct: 113 RSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLS 172
Query: 190 SNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNFFSQMRAVGFKPNNFTFAFVL 249
S FVG L+ + CG + AR V D + + +++ S + VG+ N F L
Sbjct: 173 STLFVGNGLVSMYGKCGFLSEARLVLDEMSR---RDVVSWNSLV--VGYAQNQ-RFDDAL 226
Query: 250 KACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVI 309
+ C +++++++ A A L AV+ T + + + +F +M KK ++
Sbjct: 227 EVCREMESVKISHDAGTMA-------SLLPAVS----NTTTENVMYVKDMFFKMGKKSLV 275
Query: 310 PWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLV 369
W+ MI Y + + ++AVEL+ RM P+ + SVL AC L LG +IH +
Sbjct: 276 SWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYI 335
Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAM 429
R L+ ++ + NAL+D+YAKCG +E + ++F R+ V+W MI Y G A+
Sbjct: 336 ERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAV 395
Query: 430 IMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVAN--ALID 487
+FSK+ + + + + + L AC+ LE G L +Y + + + ++D
Sbjct: 396 ALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTD-HYKITPRLEHLACMVD 454
Query: 488 MYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
+ + G + +A R + DM + NE W A++ +H
Sbjct: 455 LLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVH 491
Score = 134 bits (336), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 174/371 (46%), Gaps = 38/371 (10%)
Query: 255 LDT---IRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPW 311
LDT IR ++ H + + + V L+ Y ++++AR++F+E+P+++VI
Sbjct: 49 LDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIII 108
Query: 312 SFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVR 371
+ MI Y + V++F M V P+ +TF VL+AC+ + +G +IH +
Sbjct: 109 NVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATK 168
Query: 372 VGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIM 431
VGL S +FV N L+ +Y KCG + + + E +R+ V+WN+++VGY Q A+ +
Sbjct: 169 VGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEV 228
Query: 432 FSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAK 491
+M ++ T +S+L A ++ T N MY K
Sbjct: 229 CREMESVKISHDAGTMASLLPAVSN-------------TTTENV------------MYVK 263
Query: 492 CGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGV 551
+F M + VSWN MI Y + + E ++++ M+ G+ P+ ++ V
Sbjct: 264 D--------MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSV 315
Query: 552 LSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQP 611
L AC + L G+ + + P + +++ + + G L+KA + E + +
Sbjct: 316 LPACGDTSALSLGKK-IHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSR- 373
Query: 612 SVMIWRALLGA 622
V+ W A++ A
Sbjct: 374 DVVSWTAMISA 384
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 167/369 (45%), Gaps = 29/369 (7%)
Query: 55 NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
+ +++ L++C + + IH K G LF N L+++Y K L +A +
Sbjct: 139 DHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVL 198
Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFT-AFLKVLVSMGWA 173
DEM R+ +S+ + + GY + +F +A+ + + E +++ A T A L VS
Sbjct: 199 DEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM--ESVKISHDAGTMASLLPAVSNTTT 256
Query: 174 ELCPCVFACVYKLGHDS----NAFVGTALIDAFSVCGCVEFARKVFDGLFNDCFEEALNF 229
E V +K+G S N +G + +A V EA+
Sbjct: 257 ENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPV--------------------EAVEL 296
Query: 230 FSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTK 289
+S+M A GF+P+ + VL AC + + K HG + +L + AL+D+Y K
Sbjct: 297 YSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAK 356
Query: 290 SGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSV 349
G + AR +FE M +DV+ W+ MI+ Y + DAV LF +++ + + P+ FV+
Sbjct: 357 CGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTT 416
Query: 350 LQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALM-DVYAKCGRMENSVELFAE-SPKR 407
L AC+ L+ G L+ ++ A M D+ + G+++ + + S +
Sbjct: 417 LAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEP 476
Query: 408 NHVTWNTMI 416
N W ++
Sbjct: 477 NERVWGALL 485
>sp|Q9LTF4|PP429_ARATH Putative pentatricopeptide repeat-containing protein At5g52630
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 588
Score = 407 bits (1045), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/552 (38%), Positives = 329/552 (59%), Gaps = 12/552 (2%)
Query: 265 HGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLS 324
HG +K+ + VA L++ Y+KS ++RR FE+ P+K WS +I+ +AQ +L
Sbjct: 38 HGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELP 97
Query: 325 IDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNAL 384
++E +M + P+ S ++CA + D+G +H L ++ G +DVFV ++L
Sbjct: 98 WMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSL 157
Query: 385 MDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATE 444
+D+YAKCG + + ++F E P+RN VTW+ M+ GY Q+GE +A+ +F + L E + +
Sbjct: 158 VDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVND 217
Query: 445 VTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDM 504
++SSV+ CA+ LE G Q+H L++K+++D V ++L+ +Y+KCG A VF+
Sbjct: 218 YSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNE 277
Query: 505 MNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQG 564
+ N WNAM+ Y+ H + +V+++F M+ G +PN +TF+ VL+ACS+ GL+++G
Sbjct: 278 VPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEG 337
Query: 565 EAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACI 624
YF M + IEP +HY S+V +LGRAG L +A ++I +P P+ +W ALL +C
Sbjct: 338 RYYFDQMKESR-IEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCT 396
Query: 625 IHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGL 673
+H N E+ +A + + P H+ LSN YA +E AA KE GL
Sbjct: 397 VHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGL 456
Query: 674 SWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERY 733
SW+E + VH F AG+ H I L L + KAGYI D S VLR+V DEK +
Sbjct: 457 SWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKNQT 516
Query: 734 LWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHH 793
+ HSE+LA+AF L P PIR++KNLR+C DCH AIK +S +R II+RD +RFH
Sbjct: 517 IRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHR 576
Query: 794 FQDGCCSCGDFW 805
F+DG CSC D+W
Sbjct: 577 FEDGKCSCNDYW 588
Score = 156 bits (395), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 160/299 (53%), Gaps = 1/299 (0%)
Query: 226 ALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLD 285
+L F +M A +P++ K+C L + +S H ++KT Y+ D++V +L+D
Sbjct: 100 SLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVD 159
Query: 286 LYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFT 345
+Y K GEI AR++F+EMP+++V+ WS M+ YAQ + +A+ LF +A N ++
Sbjct: 160 MYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYS 219
Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
F SV+ CA L+LG QIH L ++ S FV ++L+ +Y+KCG E + ++F E P
Sbjct: 220 FSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVP 279
Query: 406 KRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ 465
+N WN M+ Y Q K + +F +M + +T+ +VL AC+ ++ G
Sbjct: 280 VKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRY 339
Query: 466 VHCLTVKANYDMDVVVANALIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
++ + +L+DM + G + +A ++ +M D E W A+++ ++H
Sbjct: 340 YFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVH 398
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 148/296 (50%), Gaps = 4/296 (1%)
Query: 337 AFVAP--NQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRM 394
AF P N +L + A G Q+H VV+ GL V+N L++ Y+K
Sbjct: 7 AFFVPCHNYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLP 66
Query: 395 ENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRAC 454
+S F +SP+++ TW+++I + Q ++ KM+ + + S ++C
Sbjct: 67 FDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSC 126
Query: 455 ASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWN 514
A L+ + G VHCL++K YD DV V ++L+DMYAKCG I AR +FD M N V+W+
Sbjct: 127 AILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWS 186
Query: 515 AMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVAN 574
M+ GY+ G + E L +F N+ +F V+S C+N LLE G +
Sbjct: 187 GMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQ-IHGLSIK 245
Query: 575 YGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVE 630
+ +S+VSL + G + A ++ +P + ++ IW A+L A H++ +
Sbjct: 246 SSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVK-NLGIWNAMLKAYAQHSHTQ 300
Score = 110 bits (276), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 174/354 (49%), Gaps = 30/354 (8%)
Query: 75 AMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLP-DATKLFDEMPERNTISFVTTIQGYT 133
+ +H V+K G L N L+N Y K ++LP D+ + F++ P++++ ++ + I +
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSK-SQLPFDSRRAFEDSPQKSSTTWSSIISCFA 92
Query: 134 ------VSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLG 187
+S +F++ + + L + H L P A K + ++ V K G
Sbjct: 93 QNELPWMSLEFLKKM-MAGNLRPDDHVL-PSA----TKSCAILSRCDIGRSVHCLSMKTG 146
Query: 188 HDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF----------------EEALNFFS 231
+D++ FVG++L+D ++ CG + +ARK+FD + EEAL F
Sbjct: 147 YDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFK 206
Query: 232 QMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSG 291
+ N+++F+ V+ C + + + HG ++K+ ++ +V +L+ LY+K G
Sbjct: 207 EALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCG 266
Query: 292 EISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQ 351
A ++F E+P K++ W+ M+ YAQ + +ELF RM+ + + PN TF++VL
Sbjct: 267 VPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLN 326
Query: 352 ACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
AC+ +D G + + +L+D+ + GR++ ++E+ P
Sbjct: 327 ACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMP 380
Score = 87.0 bits (214), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 123/266 (46%), Gaps = 16/266 (6%)
Query: 55 NSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLF 114
+ H ++ +SC ++HC +K G D+F + L+++Y K + A K+F
Sbjct: 115 DDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMF 174
Query: 115 DEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAE 174
DEMP+RN +++ + GY + EA+ LF E +N ++F++ + V + E
Sbjct: 175 DEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLE 234
Query: 175 LCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-------GLFNDCF---- 223
L + K DS++FVG++L+ +S CG E A +VF+ G++N
Sbjct: 235 LGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYA 294
Query: 224 -----EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLY 278
++ + F +M+ G KPN TF VL AC + + ++ E
Sbjct: 295 QHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDK 354
Query: 279 VAVALLDLYTKSGEISNARRIFEEMP 304
+L+D+ ++G + A + MP
Sbjct: 355 HYASLVDMLGRAGRLQEALEVITNMP 380
>sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protein At4g14050,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2
SV=3
Length = 612
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/603 (37%), Positives = 345/603 (57%), Gaps = 46/603 (7%)
Query: 249 LKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDV 308
L+ C T+ AK+ H +K +A L+++Y K G S+A ++F+EMP +D
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 309 IPWSFMIARYAQTDLSIDAVELFCRMRQAF-VAPNQFTFVSVLQACATMEGLDLGNQIHS 367
I W+ ++ Q +LS + +F + + + P+ F F ++++ACA + +D G Q+H
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 368 LVVRVGLLSDVFVSNALMDVYAKCG-------------------------------RMEN 396
+ +D V ++L+D+YAKCG R E
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 397 SVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATE-VTYSSVLRACA 455
++ELF P +N +W +I G+VQ G+ +A +F++M E+V + + SS++ ACA
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249
Query: 456 SLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNA 515
+LAA G QVH L + +D V ++NALIDMYAKC + A+ +F M + VSW +
Sbjct: 250 NLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTS 309
Query: 516 MISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANY 575
+I G + HG + + L ++D M G +PN +TFVG++ ACS+ G +E+G F+SM +Y
Sbjct: 310 LIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDY 369
Query: 576 GIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLS 635
GI P ++HYT ++ LLGR+G LD+A LI +PF P W ALL AC ++G
Sbjct: 370 GIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRI 429
Query: 636 AQHIL-DFEPEDEATHVLLSNIYAMARSWEKAAS-----------KEPGLSWIENQGMVH 683
A H++ F+ +D +T++LLSNIYA A W K + K+PG S +E +
Sbjct: 430 ADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETE 489
Query: 684 YFRAGDTSHADMNIIRGMLEWLNMKSR-KAGYIPDLSAVLRDVREDEKERYLWVHSEKLA 742
F AG+TSH I +L+ L + R + GY+PD S +L D+ E EKE+ L+ HSE+ A
Sbjct: 490 VFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSA 549
Query: 743 LAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCG 802
+A+ L K P +PIRI+KNLR+C DCH +K IS+I +REII+RD R+HHF+ G CSC
Sbjct: 550 VAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCN 609
Query: 803 DFW 805
DFW
Sbjct: 610 DFW 612
Score = 144 bits (362), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 188/407 (46%), Gaps = 51/407 (12%)
Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFND---CFEEALNFFSQMRA 235
+ A + KLG + L++ + CG A +VFD + + + L +Q
Sbjct: 25 LHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANL 84
Query: 236 VG--------------FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAV 281
G +P++F F+ ++KAC L +I + H + + Y D V
Sbjct: 85 SGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKS 144
Query: 282 ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVEL----------- 330
+L+D+Y K G +++A+ +F+ + K+ I W+ M++ YA++ +A+EL
Sbjct: 145 SLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYS 204
Query: 331 --------------------FCRMRQAFV-APNQFTFVSVLQACATMEGLDLGNQIHSLV 369
F MR+ V + S++ ACA + G Q+H LV
Sbjct: 205 WTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLV 264
Query: 370 VRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAM 429
+ +G S VF+SNAL+D+YAKC + + ++F+ R+ V+W ++IVG Q G+ KA+
Sbjct: 265 IALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKAL 324
Query: 430 IMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQV-HCLTVKANYDMDVVVANALIDM 488
++ M+ V EVT+ ++ AC+ + +E G ++ +T + L+D+
Sbjct: 325 ALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDL 384
Query: 489 YAKCGSITDAR-LVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFD 534
+ G + +A L+ M +E +W A++S G +++ D
Sbjct: 385 LGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIAD 431
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 114/192 (59%), Gaps = 1/192 (0%)
Query: 346 FVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
++ LQ CA L +H+ +V++G++ ++N L++VY KCG +++++F E P
Sbjct: 6 YLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMP 65
Query: 406 KRNHVTWNTMIVGYVQLGEVGKAM-IMFSKMLEEQVPATEVTYSSVLRACASLAALEPGM 464
R+H+ W +++ Q GK + + S + + +S++++ACA+L +++ G
Sbjct: 66 HRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGR 125
Query: 465 QVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHG 524
QVHC + + Y D VV ++L+DMYAKCG + A+ VFD + N +SW AM+SGY+ G
Sbjct: 126 QVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSG 185
Query: 525 LSAEVLKVFDLM 536
E L++F ++
Sbjct: 186 RKEEALELFRIL 197
Score = 106 bits (265), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 173/415 (41%), Gaps = 63/415 (15%)
Query: 59 YATSLQSCIQNDDLQTAMTIHCQVLKKG--NCLDLFATNVLLNVYVKLNRLPDATKLFDE 116
Y LQ C +N L TA +H ++K G C L N L+NVY K A ++FDE
Sbjct: 6 YLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPL--ANTLVNVYGKCGAASHALQVFDE 63
Query: 117 MPERNTI---SFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNP--FAFTAFLKVLVSMG 171
MP R+ I S +T + +S + + + L P F F+A +K ++G
Sbjct: 64 MPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSS----SGLRPDDFVFSALVKACANLG 119
Query: 172 WAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD--------------- 216
+ V + ++ V ++L+D ++ CG + A+ VFD
Sbjct: 120 SIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVS 179
Query: 217 -----GLFNDCFE---------------------------EALNFFSQMRAVGFKP-NNF 243
G + E EA + F++MR +
Sbjct: 180 GYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPL 239
Query: 244 TFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEM 303
+ ++ AC L + HG + ++ ++++ AL+D+Y K ++ A+ IF M
Sbjct: 240 VLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRM 299
Query: 304 PKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGN 363
+DV+ W+ +I AQ + A+ L+ M V PN+ TFV ++ AC+ + ++ G
Sbjct: 300 RHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGR 359
Query: 364 QI-HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTMI 416
++ S+ G+ + L+D+ + G ++ + L P + TW ++
Sbjct: 360 ELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALL 414
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 120/283 (42%), Gaps = 21/283 (7%)
Query: 97 LLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHE-L 155
+++ Y K R +A +LF +P +N S+ I G+ S + +EA +F+ + RE + L
Sbjct: 177 MVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDIL 236
Query: 156 NPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVF 215
+P ++ + ++ + V V LG DS F+ ALID ++ C V A+ +F
Sbjct: 237 DPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIF 296
Query: 216 DGLFNDCF----------------EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIR 259
+ + E+AL + M + G KPN TF ++ AC + +
Sbjct: 297 SRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVE 356
Query: 260 VAKSAHGCALKT-CYEMDLYVAVALLDLYTKSGEISNARRIFEEMP-KKDVIPWSFMIAR 317
+ K L LLDL +SG + A + MP D W+ +++
Sbjct: 357 KGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSA 416
Query: 318 YAQTDLSIDAVELFCRMRQAF--VAPNQFTFVSVLQACATMEG 358
+ + + + +F P+ + +S + A A++ G
Sbjct: 417 CKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWG 459
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 405 bits (1040), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/590 (37%), Positives = 327/590 (55%), Gaps = 46/590 (7%)
Query: 262 KSAHGCALKTCYEMDLYVAVALLDL---YTKSGEISNARRIFEEMPKKDVIPWSFMIARY 318
K H LKT D Y L T S + A+ +F+ + D W+ MI +
Sbjct: 31 KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGF 90
Query: 319 AQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDV 378
+ +D ++ L+ RM + N +TF S+L+AC+ + + QIH+ + ++G +DV
Sbjct: 91 SCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDV 150
Query: 379 FVSNALMDVYA-------------------------------KCGRMENSVELFAESPKR 407
+ N+L++ YA K G+M+ ++ LF + ++
Sbjct: 151 YAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEK 210
Query: 408 NHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVH 467
N ++W TMI GYVQ +A+ +F +M V V+ ++ L ACA L ALE G +H
Sbjct: 211 NAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIH 270
Query: 468 CLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSA 527
K MD V+ LIDMYAKCG + +A VF + + +W A+ISGY+ HG
Sbjct: 271 SYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGR 330
Query: 528 EVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSM 587
E + F MQ+ G +PN +TF VL+ACS GL+E+G+ F SM +Y ++P IEHY +
Sbjct: 331 EAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCI 390
Query: 588 VSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQHILDFEPEDE 647
V LLGRAG LD+A + I+ +P +P+ +IW ALL AC IH N+E+G + ++ +P
Sbjct: 391 VDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHG 450
Query: 648 ATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYFRAGDTSHADMN 696
+V +NI+AM + W+KAA +K PG S I +G H F AGD SH ++
Sbjct: 451 GRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIE 510
Query: 697 IIRGMLEWLNMKSRKAGYIPDLSAVLRD-VREDEKERYLWVHSEKLALAFALFKMPPSSP 755
I+ + K + GY+P+L +L D V +DE+E + HSEKLA+ + L K P +
Sbjct: 511 KIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGTI 570
Query: 756 IRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
IRI+KNLR+C DCH K+ISKI +R+I++RD RFHHF+DG CSCGD+W
Sbjct: 571 IRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 191/441 (43%), Gaps = 62/441 (14%)
Query: 48 TFSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNR- 106
+FS+ E N + + LQ C + ++L+ IH ++LK G D +A L+ +
Sbjct: 7 SFSL-EHNLYETMSCLQRCSKQEELKQ---IHARMLKTGLMQDSYAITKFLSFCISSTSS 62
Query: 107 --LPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFL 164
LP A +FD +T + I+G++ S + ++ L+ + N + F + L
Sbjct: 63 DFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLL 122
Query: 165 KVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFD-------- 216
K ++ E + A + KLG++++ + +LI++++V G + A +FD
Sbjct: 123 KACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDV 182
Query: 217 -------------------GLFN--------------------DCFEEALNFFSQMRAVG 237
LF D +EAL F +M+
Sbjct: 183 SWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSD 242
Query: 238 FKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNAR 297
+P+N + A L AC L + K H KT MD + L+D+Y K GE+ A
Sbjct: 243 VEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEAL 302
Query: 298 RIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATME 357
+F+ + KK V W+ +I+ YA +A+ F M++ + PN TF +VL AC+
Sbjct: 303 EVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTG 362
Query: 358 GLDLGNQI-HSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFAESP-KRNHVTWNTM 415
++ G I +S+ L + ++D+ + G ++ + E P K N V W +
Sbjct: 363 LVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGAL 422
Query: 416 -----IVGYVQLG-EVGKAMI 430
I ++LG E+G+ +I
Sbjct: 423 LKACRIHKNIELGEEIGEILI 443
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 404 bits (1038), Expect = e-111, Method: Compositional matrix adjust.
Identities = 246/720 (34%), Positives = 375/720 (52%), Gaps = 95/720 (13%)
Query: 105 NRLP-DATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAF 163
N LP +A +LFDEM ERN +S+ + GY + VEA +F + E N ++TA
Sbjct: 61 NGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMP----ERNVVSWTAM 116
Query: 164 LKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLFNDCF 223
+K G+ VG
Sbjct: 117 VK---------------------GYMQEGMVG---------------------------- 127
Query: 224 EEALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEM----DLYV 279
EA + F +M P ++ + +D R+ K+ + Y+M D+
Sbjct: 128 -EAESLFWRM------PERNEVSWTVMFGGLIDDGRIDKA------RKLYDMMPVKDVVA 174
Query: 280 AVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFV 339
+ ++ + G + AR IF+EM +++V+ W+ MI Y Q + A +LF +
Sbjct: 175 STNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLF----EVMP 230
Query: 340 APNQFTFVSVLQACATMEGLDLGNQIHSL--VVRVGLLSDVFVSNALMDVYAKCGRMENS 397
+ ++ S+L G L +I V + V NA++ + + G + +
Sbjct: 231 EKTEVSWTSMLL------GYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKA 284
Query: 398 VELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASL 457
+F R++ TW MI Y + G +A+ +F++M ++ V + + S+L CA+L
Sbjct: 285 RRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATL 344
Query: 458 AALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMI 517
A+L+ G QVH V+ +D DV VA+ L+ MY KCG + A+LVFD + + + WN++I
Sbjct: 345 ASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSII 404
Query: 518 SGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGI 577
SGY+ HGL E LK+F M G PN +T + +L+ACS G LE+G F+SM + + +
Sbjct: 405 SGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCV 464
Query: 578 EPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGACIIHNNVEIGRLSAQ 637
P +EHY+ V +LGRAG +DKA +LIE + +P +W ALLGAC H+ +++ ++A+
Sbjct: 465 TPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAK 524
Query: 638 HILDFEPEDEATHVLLSNIYAMARSWEKAA-----------SKEPGLSWIENQGMVHYF- 685
+ + EP++ T+VLLS+I A W A SK PG SWIE VH F
Sbjct: 525 KLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFT 584
Query: 686 RAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLALAF 745
R G +H + +I MLE + R+AGY PD S VL DV E+EK L HSE+LA+A+
Sbjct: 585 RGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAY 644
Query: 746 ALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDVHRFHHFQDGCCSCGDFW 805
L K+P PIR++KNLR+C DCH AIK+ISK+ +REII+RD +RFHHF +G CSC D+W
Sbjct: 645 GLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/449 (25%), Positives = 204/449 (45%), Gaps = 28/449 (6%)
Query: 90 DLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLH 149
++ + N L++ Y+K + +A +F+ MPERN +S+ ++GY EA LF +
Sbjct: 78 NVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRM- 136
Query: 150 REGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTALIDAFSVCGCVE 209
E N ++T L+ G + +Y + + T +I G V+
Sbjct: 137 ---PERNEVSWTVMFGGLIDDGRIDKA----RKLYDMMPVKDVVASTNMIGGLCREGRVD 189
Query: 210 FARKVFDGLFNDCFEEALNFFSQMRAVGFKPNN-FTFAFVLKACLGLDT-IRVAKSAHGC 267
AR +FD + E + ++ M G++ NN A L + T + G
Sbjct: 190 EARLIFD----EMRERNVVTWTTM-ITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGY 244
Query: 268 ALKTCYE----------MDLYVAV-ALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIA 316
L E M +A A++ + + GEIS ARR+F+ M +D W MI
Sbjct: 245 TLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIK 304
Query: 317 RYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLS 376
Y + ++A++LF +M++ V P+ + +S+L CAT+ L G Q+H+ +VR
Sbjct: 305 AYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDD 364
Query: 377 DVFVSNALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKML 436
DV+V++ LM +Y KCG + + +F ++ + WN++I GY G +A+ +F +M
Sbjct: 365 DVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMP 424
Query: 437 EEQVPATEVTYSSVLRACASLAALEPGMQV-HCLTVKANYDMDVVVANALIDMYAKCGSI 495
+VT ++L AC+ LE G+++ + K V + +DM + G +
Sbjct: 425 SSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQV 484
Query: 496 TDA-RLVFDMMNDWNEVSWNAMISGYSMH 523
A L+ M + W A++ H
Sbjct: 485 DKAMELIESMTIKPDATVWGALLGACKTH 513
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/427 (23%), Positives = 194/427 (45%), Gaps = 51/427 (11%)
Query: 49 FSVSEFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLP 108
+ + E N S+ I + + A ++ + K D+ A+ ++ + R+
Sbjct: 134 WRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVK----DVVASTNMIGGLCREGRVD 189
Query: 109 DATKLFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFL---- 164
+A +FDEM ERN +++ T I GY +++ A LF + E ++T+ L
Sbjct: 190 EARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMP----EKTEVSWTSMLLGYT 245
Query: 165 ---KVLVSMGWAELCPC--VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDGLF 219
++ + + E+ P V AC A+I F G + AR+VFD L
Sbjct: 246 LSGRIEDAEEFFEVMPMKPVIAC-------------NAMIVGFGEVGEISKARRVFD-LM 291
Query: 220 ND----------------CFE-EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAK 262
D FE EAL+ F+QM+ G +P+ + +L C L +++ +
Sbjct: 292 EDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGR 351
Query: 263 SAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTD 322
H ++ ++ D+YVA L+ +Y K GE+ A+ +F+ KD+I W+ +I+ YA
Sbjct: 352 QVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHG 411
Query: 323 LSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQI-HSLVVRVGLLSDVFVS 381
L +A+++F M + PN+ T +++L AC+ L+ G +I S+ + + V
Sbjct: 412 LGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHY 471
Query: 382 NALMDVYAKCGRMENSVELFAE-SPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQV 440
+ +D+ + G+++ ++EL + K + W ++ + A + K+ E +
Sbjct: 472 SCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENE- 530
Query: 441 PATEVTY 447
P TY
Sbjct: 531 PDNAGTY 537
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 147/340 (43%), Gaps = 64/340 (18%)
Query: 288 TKSGEISNARR-------------------------------IFEEMPKKDVIPWSFMIA 316
++ G+I+ AR+ +F+EM +++V+ W+ +++
Sbjct: 28 SRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVS 87
Query: 317 RYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL------GNQIHSLVV 370
Y + + ++A +F M + V +Q E L N++ V+
Sbjct: 88 GYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVM 147
Query: 371 RVGLLSDVFVSNA--------LMDVYA---------KCGRMENSVELFAESPKRNHVTWN 413
GL+ D + A + DV A + GR++ + +F E +RN VTW
Sbjct: 148 FGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWT 207
Query: 414 TMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQ-VHCLTVK 472
TMI GY Q V A +F M E+ TEV+++S+L +E + + +K
Sbjct: 208 TMITGYRQNNRVDVARKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVMPMK 263
Query: 473 ANYDMDVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKV 532
V+ NA+I + + G I+ AR VFD+M D + +W MI Y G E L +
Sbjct: 264 P-----VIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDL 318
Query: 533 FDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMV 572
F MQ++G RP+ + + +LS C+ L+ G +V
Sbjct: 319 FAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLV 358
Score = 73.2 bits (178), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 121/276 (43%), Gaps = 57/276 (20%)
Query: 382 NALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYV--------------------- 420
N+++ Y G + + +LF E +RN V+WN ++ GY+
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV 111
Query: 421 ----------QLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEPGMQVHCLT 470
Q G VG+A +F +M E EV+++ + ++ ++
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRMPERN----EVSWTVMFGGLIDDGRIDKARKL---- 163
Query: 471 VKANYDM----DVVVANALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLS 526
YDM DVV + +I + G + +ARL+FD M + N V+W MI+GY +
Sbjct: 164 ----YDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRV 219
Query: 527 AEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTS 586
K+F++M ++ +++ +L + G +E E +F+ M ++P I +
Sbjct: 220 DVARKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVM----PMKPVIA-CNA 270
Query: 587 MVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRALLGA 622
M+ G G + KA ++ + + + + WR ++ A
Sbjct: 271 MIVGFGEVGEISKARRVFDLMEDRDNA-TWRGMIKA 305
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 9/141 (6%)
Query: 483 NALIDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWR 542
N+++ Y G +AR +FD M++ N VSWN ++SGY + + E VF+LM +R
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPER--- 108
Query: 543 PNNLTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAK 602
N +++ ++ G++ + E+ F M + +T M L G +DKA K
Sbjct: 109 -NVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVS-----WTVMFGGLIDDGRIDKARK 162
Query: 603 LIEGIPFQPSVMIWRALLGAC 623
L + +P + V + G C
Sbjct: 163 LYDMMPVKDVVASTNMIGGLC 183
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 10/148 (6%)
Query: 486 IDMYAKCGSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNN 545
I ++ G I +AR FD + SWN+++SGY +GL E ++FD M +R N
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSER----NV 79
Query: 546 LTFVGVLSACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIE 605
+++ G++S ++ + F+ M E + +T+MV + G + +A L
Sbjct: 80 VSWNGLVSGYIKNRMIVEARNVFELMP-----ERNVVSWTAMVKGYMQEGMVGEAESLFW 134
Query: 606 GIPFQPSVMIWRALLGACIIHNNVEIGR 633
+P + V W + G I ++ R
Sbjct: 135 RMPERNEVS-WTVMFGGLIDDGRIDKAR 161
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 399 bits (1026), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/557 (38%), Positives = 319/557 (57%), Gaps = 13/557 (2%)
Query: 262 KSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQT 321
K H L+T + + LL+ G++ AR++F+EM K + W+ + Y +
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 322 DLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVS 381
L +++ L+ +MR V P++FT+ V++A + + G +H+ VV+ G V+
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVA 147
Query: 382 NALMDVYAKCGRMENSVELFAESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVP 441
L+ +Y K G + ++ LF ++ V WN + VQ G A+ F+KM + V
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQ 207
Query: 442 ATEVTYSSVLRACASLAALEPGMQVHCLTVKANYDMDVVVANALIDMYAKCGSITDARLV 501
T S+L AC L +LE G +++ K D +++V NA +DM+ KCG+ AR++
Sbjct: 208 FDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVL 267
Query: 502 FDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVLSACSNGGLL 561
F+ M N VSW+ MI GY+M+G S E L +F MQ G RPN +TF+GVLSACS+ GL+
Sbjct: 268 FEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLV 327
Query: 562 EQGEAYFKSMVA--NYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPSVMIWRAL 619
+G+ YF MV + +EP EHY MV LLGR+G L++A + I+ +P +P IW AL
Sbjct: 328 NEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGAL 387
Query: 620 LGACIIHNNVEIGRLSAQHILDFEPEDEATHVLLSNIYAMARSW---EKAASKEPGL--- 673
LGAC +H ++ +G+ A +++ P+ + HVLLSNIYA A W +K SK L
Sbjct: 388 LGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTK 447
Query: 674 -----SWIENQGMVHYFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVRED 728
S +E +G +H+F GD SH I L+ + K RK GY+PD +V DV +
Sbjct: 448 KVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEME 507
Query: 729 EKERYLWVHSEKLALAFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIIIRDV 788
EKE L HSEKLA+AF L K P PIR++KNLR C DCH K +S + EII+RD
Sbjct: 508 EKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDK 567
Query: 789 HRFHHFQDGCCSCGDFW 805
+RFHHF++G CSC +FW
Sbjct: 568 NRFHHFRNGVCSCKEFW 584
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 185/366 (50%), Gaps = 22/366 (6%)
Query: 179 VFACVYKLGHDSNAFVGTALIDAFSVCGCVEFARKVFDG-------LFNDCFE------- 224
+ A V + G + T L++ V G + +AR+VFD L+N F+
Sbjct: 30 IHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQL 89
Query: 225 --EALNFFSQMRAVGFKPNNFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVA 282
E+L + +MR +G +P+ FT+ FV+KA L + H +K + VA
Sbjct: 90 PFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATE 149
Query: 283 LLDLYTKSGEISNARRIFEEMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPN 342
L+ +Y K GE+S+A +FE M KD++ W+ +A QT S A+E F +M V +
Sbjct: 150 LVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFD 209
Query: 343 QFTFVSVLQACATMEGLDLGNQIHSLVVRVGLLSDVFVSNALMDVYAKCGRMENSVELFA 402
FT VS+L AC + L++G +I+ + + ++ V NA +D++ KCG E + LF
Sbjct: 210 SFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFE 269
Query: 403 ESPKRNHVTWNTMIVGYVQLGEVGKAMIMFSKMLEEQVPATEVTYSSVLRACASLAALEP 462
E +RN V+W+TMIVGY G+ +A+ +F+ M E + VT+ VL AC+ +
Sbjct: 270 EMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNE 329
Query: 463 GMQVHCLTVKANYDMDVVVANA----LIDMYAKCGSITDA-RLVFDMMNDWNEVSWNAMI 517
G + L V++N D ++ ++D+ + G + +A + M + + W A++
Sbjct: 330 GKRYFSLMVQSN-DKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALL 388
Query: 518 SGYSMH 523
++H
Sbjct: 389 GACAVH 394
Score = 100 bits (249), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 154/347 (44%), Gaps = 19/347 (5%)
Query: 78 IHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATKLFDEMPERNTISFVTTIQGYTVSSQ 137
IH VL+ G LL V + + A ++FDEM + + T +GY +
Sbjct: 30 IHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQL 89
Query: 138 FVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGWAELCPCVFACVYKLGHDSNAFVGTA 197
E++ L+ + G + F + +K + +G + A V K G V T
Sbjct: 90 PFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATE 149
Query: 198 LIDAFSVCGCVEFARKVFDGL-----------FNDCFEE-----ALNFFSQMRAVGFKPN 241
L+ + G + A +F+ + C + AL +F++M A + +
Sbjct: 150 LVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFD 209
Query: 242 NFTFAFVLKACLGLDTIRVAKSAHGCALKTCYEMDLYVAVALLDLYTKSGEISNARRIFE 301
+FT +L AC L ++ + + + A K + ++ V A LD++ K G AR +FE
Sbjct: 210 SFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFE 269
Query: 302 EMPKKDVIPWSFMIARYAQTDLSIDAVELFCRMRQAFVAPNQFTFVSVLQACATMEGLDL 361
EM +++V+ WS MI YA S +A+ LF M+ + PN TF+ VL AC+ ++
Sbjct: 270 EMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNE 329
Query: 362 GNQIHSLVVRV---GLLSDVFVSNALMDVYAKCGRMENSVELFAESP 405
G + SL+V+ L ++D+ + G +E + E + P
Sbjct: 330 GKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMP 376
Score = 67.0 bits (162), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 87/200 (43%), Gaps = 8/200 (4%)
Query: 435 MLEEQVPATEVTYSSVLRACASLAALEPGM--QVHCLTVKANYDMDVVVANALIDMYAKC 492
ML +Q P T+ S +LRA +S +P ++H + ++ + + L++
Sbjct: 1 MLAKQTPLTKQMLSELLRASSS----KPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVI 56
Query: 493 GSITDARLVFDMMNDWNEVSWNAMISGYSMHGLSAEVLKVFDLMQQRGWRPNNLTFVGVL 552
G + AR VFD M+ WN + GY + L E L ++ M+ G RP+ T+ V+
Sbjct: 57 GDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVV 116
Query: 553 SACSNGGLLEQGEAYFKSMVANYGIEPCIEHYTSMVSLLGRAGHLDKAAKLIEGIPFQPS 612
A S G G A + V YG T +V + + G L A L E + +
Sbjct: 117 KAISQLGDFSCGFA-LHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVK-D 174
Query: 613 VMIWRALLGACIIHNNVEIG 632
++ W A L C+ N I
Sbjct: 175 LVAWNAFLAVCVQTGNSAIA 194
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 3/123 (2%)
Query: 53 EFNSHSYATSLQSCIQNDDLQTAMTIHCQVLKKGNCLDLFATNVLLNVYVKLNRLPDATK 112
+F+S + + L +C Q L+ I+ + K+ ++ N L++++K A
Sbjct: 207 QFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARV 266
Query: 113 LFDEMPERNTISFVTTIQGYTVSSQFVEAVGLFSTLHREGHELNPFAFTAFLKVLVSMGW 172
LF+EM +RN +S+ T I GY ++ EA+ LF+T+ EG N + FL VL +
Sbjct: 267 LFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPN---YVTFLGVLSACSH 323
Query: 173 AEL 175
A L
Sbjct: 324 AGL 326
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.136 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 276,078,772
Number of Sequences: 539616
Number of extensions: 10748150
Number of successful extensions: 40789
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 364
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 31256
Number of HSP's gapped (non-prelim): 2649
length of query: 805
length of database: 191,569,459
effective HSP length: 126
effective length of query: 679
effective length of database: 123,577,843
effective search space: 83909355397
effective search space used: 83909355397
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 65 (29.6 bits)