BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039716
(1002 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3S4A7|AHK5_ARATH Histidine kinase 5 OS=Arabidopsis thaliana GN=AHK5 PE=2 SV=1
Length = 922
Score = 1157 bits (2992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 613/1011 (60%), Positives = 734/1011 (72%), Gaps = 100/1011 (9%)
Query: 1 MVCNMETDLIEDMDIEGLPSMWPEDIGS--DKQFNVERPGGGQDMLEEVTIPEDQTIVDF 58
MVC METD IE+MD+E L SMWPED+G+ DKQFNVE+P G D L+EVTI E +TI D
Sbjct: 1 MVCEMETDQIEEMDVEVLSSMWPEDVGTEADKQFNVEKPAGDLDTLKEVTI-ETRTIADM 59
Query: 59 KRLLELTNYTDKGSSQMAYLVKHWEYRQSNAVRLLREELDNLSRQRQESELKKLEILEEH 118
RL L N T +GSSQ+ LVK WEY Q NAVRLL+EEL NL RQR+E+E K+L+I+EE+
Sbjct: 60 TRLPNLLNSTHQGSSQLTNLVKQWEYMQDNAVRLLKEELKNLDRQREEAEAKELKIIEEY 119
Query: 119 RFEEEGYGGDKRPISIMDELSDMWKDVCPRKNDVVFQSKRVEVDAEYDTVEYWKQRALDL 178
+FE + + ++DE SD+++ +K D + SK++E+ E+DTV YWKQ+AL L
Sbjct: 120 KFE----SNEPENVPVLDETSDLFRRFRQKKRDALVDSKKIEIYEEFDTVAYWKQKALSL 175
Query: 179 EKMLEASGQREQALMEKLNESVTNLEKQSSPVEELSQILKRADNFLHFVLQNAPVVMGHQ 238
EKMLEAS +RE+ LMEKL+ES+ +E QS+PV+EL+Q LKRA+ FLHF+LQNAP+VMGHQ
Sbjct: 176 EKMLEASTERERRLMEKLSESLKTMESQSAPVQELTQNLKRAEGFLHFILQNAPIVMGHQ 235
Query: 239 DKELRYRFIYNHFPSLHEEDILGKTDVEIFSGAGVKESQDFKREVLEKGLPAKREITFET 298
DK+LRY FIYN +PSL E+DILGKTDVEIF G GVKES+DFKREVLEKG +KREITF T
Sbjct: 236 DKDLRYLFIYNKYPSLREQDILGKTDVEIFHGGGVKESEDFKREVLEKGKASKREITFTT 295
Query: 299 ELFGSKTFLIYVEPVFSKSGETIGVNYMGMDVTDQVRKREKMAKLREEIAVQKAKETELN 358
+LFGSKTFLIYVEPV++K+GE IG+NYMGM+VTDQV KREKMAKLRE+ AV+KA E+ELN
Sbjct: 296 DLFGSKTFLIYVEPVYNKAGEKIGINYMGMEVTDQVVKREKMAKLREDNAVRKAMESELN 355
Query: 359 KTIHITEETMRAKQMLATMSHEIRSPLTGVVSMAEILSNTKLDREQRQLLGVMISSGDLV 418
KTIHITEETMRAKQMLATMSHEIRSPL+GVV MAEILS TKLD+EQRQLL VMISSGDLV
Sbjct: 356 KTIHITEETMRAKQMLATMSHEIRSPLSGVVGMAEILSTTKLDKEQRQLLNVMISSGDLV 415
Query: 419 LQLINDILDLSKVESGVMKLEAAKFRPREVVKHVLQTAAASLQKILMLEGDIADDVPIEV 478
LQLINDILDLSKVESGVM+LEA KFRPREVVKHVLQTAAASL+K L LEG+IADDVPIEV
Sbjct: 416 LQLINDILDLSKVESGVMRLEATKFRPREVVKHVLQTAAASLKKSLTLEGNIADDVPIEV 475
Query: 479 IGDVLRIRQILTNLISNAIKFTPEGKVGIKLYVVPEPPFAKEGLKQKSKAYQSATDAVKE 538
+GDVLRIRQILTNLISNAIKFT EG VGIKL V+ EP F ++ +A +A E
Sbjct: 476 VGDVLRIRQILTNLISNAIKFTHEGNVGIKLQVISEPSFVRD----------NALNADTE 525
Query: 539 EKHQPKSQTASDQNGFHDKKHGEGYQDHKHDDDPGTPVSHGNSMDEDLEATVWIRCDVYD 598
E +QNG E +VWI CDV+D
Sbjct: 526 EH---------EQNGL-------------------------------TETSVWICCDVWD 545
Query: 599 TGIGIPENALPTLFRKYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVTSKVHCGST 658
TGIGIPENALP LF+KYMQ SADHARKYGGTGLGLAICKQLVELMGG+LTVTS+V GST
Sbjct: 546 TGIGIPENALPCLFKKYMQASADHARKYGGTGLGLAICKQLVELMGGQLTVTSRVSEGST 605
Query: 659 FTFILPYQVSPIEENSDDPDDLSDMADQDSVTDDVTAGFFQFQPRTLGSLFSSNGTSRSK 718
FTFILPY+V ++ SDD D+ SDMADQ S DD G+FQF+P LGS++S+ G S
Sbjct: 606 FTFILPYKVGRSDDYSDDQDEFSDMADQQSEPDDTAEGYFQFKP-LLGSIYSNGGPGISN 664
Query: 719 KLLPNSIGFASAHK-VNGFSETSYSFPSNNR-QKETAPLEDACSVAEVAETLSEPESSFS 776
LP+ + S K +NGF + PSNN Q E LE+ + E S+ E+S
Sbjct: 665 DFLPHKVMLTSPIKLINGF----VADPSNNTGQSEMLQLENGGYMDE-----SKLETSSG 715
Query: 777 HSPEPENETEVSRGKQCHVETTSWFQNPATESTSHSEANREMIQTSKTNEPQKICEMQEK 836
H PE ++ E G+ E+ S + A+ E E+ +S E +
Sbjct: 716 HCPESAHQYENGNGRCFSKESESCSSSQASSEGGTLEMESELTVSSHREEEK-------- 767
Query: 837 PDRISQSPSSSSAEVPETKPKPKPKILLVEDNKINVMVAKSMMKQLGHSIDVVNNGVEAV 896
+ EV ET KPKILLVEDNKIN+MVAKSMMKQLGH++D+ NNGVEA+
Sbjct: 768 ----------AETEVKET---SKPKILLVEDNKINIMVAKSMMKQLGHTMDIANNGVEAI 814
Query: 897 HAVQCQNYDLILMDVCMPVMDGLKATRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNH-- 954
A+ +YDL+LMDVCMPV+DGLKATRLIRS+E+TGNW+AA EAG++ S S N
Sbjct: 815 TAINSSSYDLVLMDVCMPVLDGLKATRLIRSYEETGNWNAAIEAGVD----ISTSENEQV 870
Query: 955 ----FKRIPIIAMTANALSESAEECFANGMDSFVSKPVTFQKLKECLEQYF 1001
R+PIIAMTAN L+ES+EEC+ANGMDSF+SKPVT QKL+ECL+QY
Sbjct: 871 CMRPTNRLPIIAMTANTLAESSEECYANGMDSFISKPVTLQKLRECLQQYL 921
>sp|Q9C5U0|AHK4_ARATH Histidine kinase 4 OS=Arabidopsis thaliana GN=AHK4 PE=1 SV=1
Length = 1080
Score = 162 bits (411), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 160/293 (54%), Gaps = 16/293 (5%)
Query: 372 QMLATMSHEIRSPLTGVVSMAEILSNTKLDREQRQLLGVMISSGDLVLQLINDILDLSKV 431
Q LAT+SHEIR+P+ G++ M +L +T+L QR G ++ LIN++LD +K+
Sbjct: 475 QFLATVSHEIRTPMNGILGMLAMLLDTELSSTQRDYAQTAQVCGKALIALINEVLDRAKI 534
Query: 432 ESGVMKLEAAKFRPREVVKHVLQT-AAASLQKILMLEGDIADDVPIEVIGDVLRIRQILT 490
E+G ++LE+ F R ++ VL + S K + L ++D VP V GD R RQI+
Sbjct: 535 EAGKLELESVPFDIRSILDDVLSLFSEESRNKSIELAVFVSDKVPEIVKGDSGRFRQIII 594
Query: 491 NLISNAIKFTPEGKVGIKLYVVPEPPFAKEGLKQKSKAYQSATDAVKEEKHQPKSQTASD 550
NL+ N++KFT +G + +K+++ E K +S+ + V EE Q++ +
Sbjct: 595 NLVGNSVKFTEKGHIFVKVHLA-------EQSKDESEPKNALNGGVSEEMIVVSKQSSYN 647
Query: 551 Q-NGFHDKKHGEGYQDHKHDDDPGTPVSHGNSMDE-DLEATVWIRCDVYDTGIGIPENAL 608
+G+ + KH VS S+ E D+ + V + + DTGIGIP A
Sbjct: 648 TLSGYEAADGRNSWDSFKH------LVSEEQSLSEFDISSNVRLMVSIEDTGIGIPLVAQ 701
Query: 609 PTLFRKYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVTSKVHCGSTFTF 661
+F +MQ + +R YGGTG+GL+I K LVELM G++ S+ H GSTF F
Sbjct: 702 GRVFMPFMQADSSTSRNYGGTGIGLSISKCLVELMRGQINFISRPHIGSTFWF 754
Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 72/142 (50%), Gaps = 17/142 (11%)
Query: 861 KILLVEDNKINVMVAKSMMKQLGHSIDVVNNGVEAVHAVQC-QNYDLILMDVCMPVMDGL 919
KIL+V+DN +N VA +K+ G + +G A+ +Q +D MD+ MP MDG
Sbjct: 946 KILVVDDNIVNRRVAAGALKKFGAEVVCAESGQVALGLLQIPHTFDACFMDIQMPQMDGF 1005
Query: 920 KATRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNHFKRIPIIAMTANALSESAEECFANG 979
+ATR IR E + +N +PI+AMTA+ + + EEC +G
Sbjct: 1006 EATRQIRMMEKE----------------TKEKTNLEWHLPILAMTADVIHATYEECLKSG 1049
Query: 980 MDSFVSKPVTFQKLKECLEQYF 1001
MD +VSKP + L + + + F
Sbjct: 1050 MDGYVSKPFEEENLYKSVAKSF 1071
>sp|Q9C5U1|AHK3_ARATH Histidine kinase 3 OS=Arabidopsis thaliana GN=AHK3 PE=1 SV=1
Length = 1036
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/308 (35%), Positives = 166/308 (53%), Gaps = 29/308 (9%)
Query: 372 QMLATMSHEIRSPLTGVVSMAEILSNTKLDREQRQLLGVMISSGDLVLQLINDILDLSKV 431
Q LAT+SHEIR+P+ GV+ M +L +T+LD Q+ + +SG ++ LIN++LD +K+
Sbjct: 453 QFLATVSHEIRTPMNGVLGMLHMLMDTELDVTQQDYVRTAQASGKALVSLINEVLDQAKI 512
Query: 432 ESGVMKLEAAKFRPREVVKHVLQT-AAASLQKILMLEGDIADDVPIEVIGDVLRIRQILT 490
ESG ++LE +F R ++ VL ++ S QK + L I+D VP +IGD R RQILT
Sbjct: 513 ESGKLELEEVRFDLRGILDDVLSLFSSKSQQKGVELAVYISDRVPDMLIGDPGRFRQILT 572
Query: 491 NLISNAIKFTPEGKVGIKLYVVPEPPFAKEGLKQKSKAYQSATDAVKEEKHQPKSQTASD 550
NL+ N+IKFT +G + + +++V E + +G S + V + + ++ A
Sbjct: 573 NLMGNSIKFTEKGHIFVTVHLVDELFESIDGETASSPESTLSGLPVADRQRSWENFKAFS 632
Query: 551 QNGFHDKKHGEGYQDHKHDDDPGTPVSHGNSMDEDLEATVWIRCDVYDTGIGIPENALPT 610
NG H+ +P P D+ V V DTG+GIP A
Sbjct: 633 SNG------------HR-SFEPSPP---------DINLIV----SVEDTGVGIPVEAQSR 666
Query: 611 LFRKYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVTSKVHCGSTFTF--ILPYQVS 668
+F +MQV +R +GGTG+GL+I K LV LM G + +S GSTFTF + +
Sbjct: 667 IFTPFMQVGPSISRTHGGTGIGLSISKCLVGLMKGEIGFSSTPKVGSTFTFTAVFSNGMQ 726
Query: 669 PIEENSDD 676
P E +D+
Sbjct: 727 PAERKNDN 734
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 82/142 (57%), Gaps = 5/142 (3%)
Query: 861 KILLVEDNKINVMVAKSMMKQLGHSIDVVNNGVEAVHAVQC-QNYDLILMDVCMPVMDGL 919
KIL+V+DN +N+ VA +K+ G + +G++A+ ++ +D MD+ MP MDG
Sbjct: 891 KILIVDDNNVNLRVAAGALKKYGADVVCAESGIKAISLLKPPHEFDACFMDIQMPEMDGF 950
Query: 920 KATRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNHFKRIPIIAMTANALSESAEECFANG 979
+ATR IR E+ N + G E + +G+ + +P++AMTA+ + + EEC G
Sbjct: 951 EATRRIRDMEEEMN--KRIKNG-EALIVENGNKTSW-HLPVLAMTADVIQATHEECLKCG 1006
Query: 980 MDSFVSKPVTFQKLKECLEQYF 1001
MD +VSKP ++L + ++F
Sbjct: 1007 MDGYVSKPFEAEQLYREVSRFF 1028
>sp|Q9C5U2|AHK2_ARATH Histidine kinase 2 OS=Arabidopsis thaliana GN=AHK2 PE=1 SV=1
Length = 1176
Score = 146 bits (369), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 162/294 (55%), Gaps = 26/294 (8%)
Query: 372 QMLATMSHEIRSPLTGVVSMAEILSNTKLDREQRQLLGVMISSGDLVLQLINDILDLSKV 431
Q LAT+SHEIR+P+ GV+ M ++L +T LD +Q SG + LIN++LD +K+
Sbjct: 590 QFLATVSHEIRTPMNGVLGMLKMLMDTDLDAKQMDYAQTAHGSGKDLTSLINEVLDQAKI 649
Query: 432 ESGVMKLEAAKFRPREVVKHV--LQTAAASLQKILMLEGDIADDVPIEVIGDVLRIRQIL 489
ESG ++LE F R ++ +V L + A+ +K + L ++ VP V+GD R RQI+
Sbjct: 650 ESGRLELENVPFDMRFILDNVSSLLSGKAN-EKGIELAVYVSSQVPDVVVGDPSRFRQII 708
Query: 490 TNLISNAIKFTPE-GKVGIKLYVVPEPPFAKEGLKQKSKAYQSATDAV-KEEKHQPKSQT 547
TNL+ N+IKFT E G + I +++ E KE L + DAV K+ S++
Sbjct: 709 TNLVGNSIKFTQERGHIFISVHLADE---VKEPL--------TIEDAVLKQRLALGCSES 757
Query: 548 ASDQNGFHDKKHGEGYQDHKHDDDPGTPVSHGNSMDEDLEATVWIRCDVYDTGIGIPENA 607
+GF +++ K T S + + ++ V V DTG+GIP +A
Sbjct: 758 GETVSGFPAVNAWGSWKNFK------TCYSTESQNSDQIKLLV----TVEDTGVGIPVDA 807
Query: 608 LPTLFRKYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVTSKVHCGSTFTF 661
+F +MQ + +R YGGTG+GL+I K+LVELM G + S+ GSTF+F
Sbjct: 808 QGRIFTPFMQADSSTSRTYGGTGIGLSISKRLVELMQGEMGFVSEPGIGSTFSF 861
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 78/142 (54%), Gaps = 5/142 (3%)
Query: 861 KILLVEDNKINVMVAKSMMKQLGHSIDVVNNGVEAVHAVQC-QNYDLILMDVCMPVMDGL 919
+IL+V+DN +N VA+ +K+ G + V +G A+ ++ N+D MD+ MP MDG
Sbjct: 1036 QILVVDDNLVNRRVAEGALKKYGAIVTCVESGKAALAMLKPPHNFDACFMDLQMPEMDGF 1095
Query: 920 KATRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNHFKRIPIIAMTANALSESAEECFANG 979
+ATR +R E N A + M SS H +PI+AMTA+ + + EEC G
Sbjct: 1096 EATRRVRELEREIN-KKIASGEVSAEMFCKFSSWH---VPILAMTADVIQATHEECMKCG 1151
Query: 980 MDSFVSKPVTFQKLKECLEQYF 1001
MD +VSKP + L + ++F
Sbjct: 1152 MDGYVSKPFEEEVLYTAVARFF 1173
>sp|Q54YZ9|DHKJ_DICDI Hybrid signal transduction histidine kinase J OS=Dictyostelium
discoideum GN=dhkJ PE=3 SV=2
Length = 2062
Score = 144 bits (364), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 122/418 (29%), Positives = 183/418 (43%), Gaps = 73/418 (17%)
Query: 590 VWIRCDVYDTGIGIPENALPTLFRKYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTV 649
V ++ V DTGIGIP++ L +F + Q R+YGGTGLGL I +LVELM G+L+V
Sbjct: 1498 VVLKFSVIDTGIGIPKDKLHLIFEAFSQADGSITRRYGGTGLGLTISTRLVELMKGKLSV 1557
Query: 650 TSKVHCGSTFTFILPYQVS----PIEENSDDPDDLSDMADQDSVTDDVTAGFFQFQPRTL 705
SK GSTF F + S P+ E +D L + DD TL
Sbjct: 1558 VSKSGKGSTFEFTAQFPTSPNQLPLTEKLNDVHTL--------IVDD--------NKSTL 1601
Query: 706 GSLFSSNGTSRSKKLLPNSIGFASAHKVNGFSETSYSFPSNNRQKETAPLEDACSVAEVA 765
L K++L F +V+ ++ +++ K T P E A++
Sbjct: 1602 KVL---------KQILSE---FGITSEVSNNTQDAFNMIVK-ATKTTKPFEFIFVDAQLG 1648
Query: 766 ETLSE--PESSFSHSPEPENETEVSRGKQCHVETTSWFQNPATESTSHSEANREMIQTSK 823
+L + E + +H C + S +N SK
Sbjct: 1649 TSLIDMMVEKNMNH---------------CKTKIIMLISGGGQRGYPDSSSNFITGYLSK 1693
Query: 824 TNEPQKICEMQEKPDRISQSPSSSSAEVPETKPKPKPKILLVEDNKINVMVAKSMMKQLG 883
P +I ++ + Q P ++ T + ILL EDN +N +A ++++ G
Sbjct: 1694 PVSPSEIFDILTRQGITRQIPKQLCKKIQLT-SEIFGDILLAEDNAVNQRLAIRLLEKFG 1752
Query: 884 HSIDVVNNGVEAVHAVQCQNYDLILMDVCMPVMDGLKATRLIRSFEDTGNWDAAAEAGIE 943
H + + NG++AV + Q + +DLILMDV MP G +AT IR E E GI
Sbjct: 1753 HRVQLAENGLQAVASSQLRKFDLILMDVQMPHCGGFEATAQIRKREH--------EQGIH 1804
Query: 944 QAMPSSGSSNHFKRIPIIAMTANALSESAEECFANGMDSFVSKPVTFQKLKECLEQYF 1001
PIIAMTA+AL+ +C GMD ++SKP+ +LK +E+Y
Sbjct: 1805 T--------------PIIAMTAHALARDRVKCLEAGMDDYISKPINPDQLKAMIEKYL 1848
Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 123/216 (56%), Gaps = 27/216 (12%)
Query: 323 VNYMGMDVTDQVRKREKMAK------LREEIAVQKAKETEL-----NKTIHITEETM--- 368
VN M ++T QVR ++AK I+V E L N+ IH +ET
Sbjct: 1274 VNTMAANLTTQVRSIAEIAKAVTKGDFTRVISVDAKGEVNLLKLIINEMIHNLKETTLKN 1333
Query: 369 -----------RAKQ-MLATMSHEIRSPLTGVVSMAEILSNTKLDREQRQLLGVMISSGD 416
RAK +A MSHEIR+P+ G++ M ++ +T+L EQR+ L ++ SS
Sbjct: 1334 TLAKETAEAASRAKSDFMANMSHEIRTPMNGIIGMTDLTLDTELTAEQREYLSMVQSSAG 1393
Query: 417 LVLQLINDILDLSKVESGVMKLEAAKFRPREVVKHVLQTAA-ASLQKILMLEGDIADDVP 475
+L +INDILD SK+E+G ++L+ A+F R + L+T + + QK + L DIA DVP
Sbjct: 1394 SLLTIINDILDFSKIEAGRLELDQAEFSLRAHLYDALKTLSWRAHQKCIELVCDIASDVP 1453
Query: 476 IEVIGDVLRIRQILTNLISNAIKFTPEGKVGIKLYV 511
+IGD R+RQI+ NL+ NAIKFT +G+V + + V
Sbjct: 1454 DSLIGDPGRLRQIVNNLVGNAIKFTSQGEVDLVVKV 1489
>sp|Q41342|ETR1_SOLLC Ethylene receptor 1 OS=Solanum lycopersicum GN=ETR1 PE=1 SV=1
Length = 754
Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 168/344 (48%), Gaps = 69/344 (20%)
Query: 330 VTDQVRKREKMAKLREEIAVQKAKETELNKTIHI------TEETMRAKQ-MLATMSHEIR 382
V DQV A + EE +A++ + + + + E +RA+ LA M+HE+R
Sbjct: 313 VADQVAVALSHAAILEE--SMRARDLLMEQNVALDLARREAEMAVRARNDFLAVMNHEMR 370
Query: 383 SPLTGVVSMAEILSNTKLDREQRQLLGVMISSGDLVLQLINDILDLSKVESGVMKLEAAK 442
+P+ +++++ +L T L EQR ++ ++ S +L+ LIND+LDLS++E G ++L+
Sbjct: 371 TPMHAIIALSSLLQETDLTPEQRLMVETILKSSNLLATLINDVLDLSRLEDGSLQLDIGT 430
Query: 443 FRPREVVK--HVLQTAAASLQKILMLEGDIADDVPIEVIGDVLRIRQILTNLISNAIKFT 500
F + + H L AS++K L + ++ D+P VIGD R+ QIL N++ NA+KF+
Sbjct: 431 FNLHALFREVHSLIKPIASVKK-LFVTLSLSSDLPEYVIGDEKRLMQILLNVVGNAVKFS 489
Query: 501 PEGKVGIKLYVVPEPPFAKEGLKQKSKAYQSATDAVKEEKHQPKSQTASDQNGFHDKKHG 560
EG V I A+ + +D++++ + P+ +N F
Sbjct: 490 KEGNVSI-------------------SAFVAKSDSLRDPR-APEFFAVPSENHF------ 523
Query: 561 EGYQDHKHDDDPGTPVSHGNSMDEDLEATVWIRCDVYDTGIGIPENALPTLFRKYMQVSA 620
++R + DTGIGI +P LF K+ Q A
Sbjct: 524 ------------------------------YLRVQIKDTGIGITPQDIPNLFSKFTQSQA 553
Query: 621 DHARKYGGTGLGLAICKQLVELMGGRLTVTSK-VHCGSTFTFIL 663
GGTGLGLAICK+ V LM G + + S+ + GST FI+
Sbjct: 554 LATTNSGGTGLGLAICKRFVNLMEGHIWIESEGLGKGSTAIFII 597
>sp|Q9M7M1|ETR1_PRUPE Ethylene receptor OS=Prunus persica GN=ETR1 PE=2 SV=1
Length = 738
Score = 136 bits (342), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 164/332 (49%), Gaps = 68/332 (20%)
Query: 330 VTDQVRKREKMAKLREEIAVQKAKETELNKTIHI------TEETMRAKQ-MLATMSHEIR 382
V DQV A + EE +A++ + + I + E +RA+ LA M+HE+R
Sbjct: 299 VADQVAVALSHAAILEE--SMRARDLLMEQNIALDLARREAETAIRARNDFLAVMNHEMR 356
Query: 383 SPLTGVVSMAEILSNTKLDREQRQLLGVMISSGDLVLQLINDILDLSKVESGVMKLEAAK 442
+P+ +++++ +L T+L EQR ++ ++ S L+ LIND+LDLS++E G ++LE A
Sbjct: 357 TPMHAIIALSSLLQETELTPEQRLMVETILKSSHLLATLINDVLDLSRLEDGSLQLEIAT 416
Query: 443 FRPREVVK--HVLQTAAASLQKILMLEGDIADDVPIEVIGDVLRIRQILTNLISNAIKFT 500
F V + H L AS++K L + ++A D+P++ +GD R+ QI+ N++ NA+KF+
Sbjct: 417 FNLHSVFREVHNLIKPVASVKK-LSVSLNLAADLPVQAVGDEKRLMQIVLNVVGNAVKFS 475
Query: 501 PEGKVGIKLYVVPEPPFAKEGLKQKSKAYQSATDAVKEEKHQPKSQTASDQNGFHDKKHG 560
EG + I A+ + ++++++ + P+ A N F+
Sbjct: 476 KEGSISI-------------------TAFVAKSESLRDFR-APEFFPAQSDNHFY----- 510
Query: 561 EGYQDHKHDDDPGTPVSHGNSMDEDLEATVWIRCDVYDTGIGIPENALPTLFRKYMQVSA 620
+R V D+G GI +P LF K+ Q +
Sbjct: 511 -------------------------------LRVQVKDSGSGINPQDIPKLFTKFAQTQS 539
Query: 621 DHARKYGGTGLGLAICKQLVELMGGRLTVTSK 652
R GG+GLGLAICK+ V LM G + + S+
Sbjct: 540 LATRNSGGSGLGLAICKRFVNLMEGHIWIESE 571
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 28/145 (19%)
Query: 858 PKPKILLVEDNKINVMVAKSMMKQLGHSIDVVNNGVEAVHAVQCQNYDLILMDVCMPVMD 917
P K+L+++DN V K ++ LG + V++ E +H + Q + ++ MDVCMP +D
Sbjct: 612 PGLKVLVMDDNG---SVTKGLLVHLGCDVTTVSSIDEFLHVIS-QEHKVVFMDVCMPGID 667
Query: 918 GLK-ATRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNHFKRIPIIAMTANALSESAEECF 976
G + A R+ F + +R ++A+T N + E C
Sbjct: 668 GYELAVRIHEKF-----------------------TKRHERPVLVALTGNIDKMTKENCM 704
Query: 977 ANGMDSFVSKPVTFQKLKECLEQYF 1001
GMD + KPV+ K++ L +
Sbjct: 705 RVGMDGVILKPVSVDKMRSVLSELL 729
>sp|Q86CZ2|DHKK_DICDI Hybrid signal transduction histidine kinase K OS=Dictyostelium
discoideum GN=dhkK PE=1 SV=1
Length = 1213
Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/331 (33%), Positives = 155/331 (46%), Gaps = 77/331 (23%)
Query: 351 KAKETELNKTIHITEETMRAKQ-MLATMSHEIRSPLTGVVSMAEILSNT-KLDREQRQLL 408
K K +L E +A+Q LATMSHEIR+PL G++ MA +L ++ L E++ +
Sbjct: 796 KLKNAQLTIAKDAAIEAYQARQEFLATMSHEIRTPLNGLIGMATLLRDSHNLPPEEKTMA 855
Query: 409 GVMISSGDLVLQLINDILDLSKVESGVMKLEAAKFRPREV---VKHVLQTAAASLQKILM 465
+ S GD++L+L+NDILDLSK+E+ M LE FR RE+ + HVL A +K +
Sbjct: 856 KAVKSCGDILLRLVNDILDLSKLEANQMGLEHIPFRMRELTQQICHVLSGQAN--EKNIH 913
Query: 466 LEGDIADDVPIEVIGDVLRIRQILTNLISNAIKFTPEGKVGIKLYVVPEPPFAKEGLKQK 525
L +++D +P ++GD RI QIL NL NA+KFT G V I +
Sbjct: 914 LSCEVSDKIPSILLGDSGRILQILMNLTGNALKFTQSGYVKIII---------------- 957
Query: 526 SKAYQSATDAVKEEKHQPKSQTASDQNGFHDKKHGEGYQDHKHDDDPGTPVSHGNSMDED 585
D ++EE + F K D G PV S +
Sbjct: 958 --------DLIEEESELVSLKKGEYNISFRVK-----------DTGIGVPVE---SHQKI 995
Query: 586 LEATVWIRCDVYDTGIGIPENALPTLFRKYMQVSADHARKYGGTGLGLAICKQLVELMGG 645
EA V A P+ RKY GG+GLGL +C +LV LM G
Sbjct: 996 FEAFV---------------QADPSDSRKY-----------GGSGLGLYLCAKLVRLMKG 1029
Query: 646 RLTVTSKVHC-GSTFTFILPYQVSPIEENSD 675
+ V + C GSTF FIL P+EE +D
Sbjct: 1030 EIGVYNNPDCDGSTFWFIL-----PLEEGTD 1055
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 79/143 (55%), Gaps = 17/143 (11%)
Query: 856 PKPKPKILLVEDNKINVMVAKSMMKQLGHSIDVVNNGVEAVHAVQCQNYDLILMDVCMPV 915
P+ K+L+ EDN IN VA ++++G +V NG E + ++ Q+YDLI MD MP+
Sbjct: 1071 PQDCVKVLIAEDNIINQRVAVKFLEKIGIKAEVAGNGNEVLEILERQHYDLIFMDFQMPI 1130
Query: 916 MDGLKATRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNHFKRIPIIAMTANALSESAEEC 975
+DGL+ ++ IR FE W+ + PS I I +TAN +S + C
Sbjct: 1131 LDGLRCSKTIREFEQNHKWN--------RICPS---------IFICGLTANTMSTDKKRC 1173
Query: 976 FANGMDSFVSKPVTFQKLKECLE 998
F +GM+ F+SKP ++L+ +E
Sbjct: 1174 FDHGMNHFISKPFQLEQLRSAIE 1196
>sp|Q9XH58|ETR1_PELHO Ethylene receptor 1 OS=Pelargonium hortorum GN=ETR1 PE=2 SV=1
Length = 740
Score = 130 bits (327), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 172/358 (48%), Gaps = 72/358 (20%)
Query: 330 VTDQVRKREKMAKLREEIAVQKAKETELNKTIHI------TEETMRAKQ-MLATMSHEIR 382
V DQV A + EE +A++ + + + + E +RA+ LA M+HE+R
Sbjct: 299 VADQVAVALSHAAILEE--SMRARDLLMEQNVALDMARREAETAIRARNDFLAVMNHEMR 356
Query: 383 SPLTGVVSMAEILSNTKLDREQRQLLGVMISSGDLVLQLINDILDLSKVESGVMKLEAAK 442
+P+ +++++ +L T L EQR ++ ++ S +L+ LIND+LDLS++E G ++L+ A
Sbjct: 357 TPMHAIIALSSLLQETDLTSEQRLMVETILKSSNLLATLINDVLDLSRLEDGSLQLDIAT 416
Query: 443 FRPREVVKHV--LQTAAASLQKILMLEGDIADDVPIEVIGDVLRIRQILTNLISNAIKFT 500
F V + V L AS++K L + +++ D+P VIGD R+ QI+ N++ NA+KF+
Sbjct: 417 FNLHAVFRQVFNLIKPIASVKK-LFITLNVSPDLPEYVIGDEKRLVQIMLNVVGNAVKFS 475
Query: 501 PEGKVGIKLYVVPEPPFAKEGLKQKSKAYQSATDAVKEEKHQPKSQTASDQNGFHDKKHG 560
EG + + A+ + +++V++ + P S N F
Sbjct: 476 KEGIISV-------------------TAFVAKSESVRDPR-APDFFPVSSDNQF------ 509
Query: 561 EGYQDHKHDDDPGTPVSHGNSMDEDLEATVWIRCDVYDTGIGIPENALPTLFRKYMQVSA 620
++R V D+G GI +P LF K+ Q
Sbjct: 510 ------------------------------YMRVQVKDSGSGINPQDMPKLFTKFAQSQP 539
Query: 621 DHARKYGGTGLGLAICKQLVELMGGRLTVTSKVHC-GSTFTFILPYQVSPIEENSDDP 677
+ GG+GLGLAI K+ V LM G + + S+ G T TF++ I E S++P
Sbjct: 540 VATKNSGGSGLGLAISKRFVNLMDGHIWIDSEGPSKGCTVTFVVKLG---IPEGSNEP 594
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 25/145 (17%)
Query: 858 PKPKILLVEDNKINVMVAKSMMKQLGHSIDVVNNGVEAVHAVQCQNYDLILMDVCMPVMD 917
P K+LL+++N I+ MV K ++ LG + V++ E + V Q++ ++ MDV +P +D
Sbjct: 612 PGLKVLLMDENGISRMVTKGLLMHLGCDVTSVSSSEECLRMVS-QDHKVVFMDVRVPGLD 670
Query: 918 GLK-ATRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNHFKRIPIIAMTANALSESAEECF 976
G + A R+ F +R I+A+T+NA + E C
Sbjct: 671 GHELAVRIHEKF-----------------------MKRHERPLIVALTSNADKVTKENCL 707
Query: 977 ANGMDSFVSKPVTFQKLKECLEQYF 1001
GM+ + KPV+ K++ L +
Sbjct: 708 RVGMEGVILKPVSVDKMRNVLSKLL 732
>sp|Q9XH57|ETR2_PELHO Ethylene receptor 2 OS=Pelargonium hortorum GN=ETR2 PE=2 SV=1
Length = 741
Score = 130 bits (326), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 174/361 (48%), Gaps = 72/361 (19%)
Query: 330 VTDQVRKREKMAKLREEIAVQKAKETELNKTIHI------TEETMRAKQ-MLATMSHEIR 382
V DQV A + EE +A++ + + + + E +RA+ LA M+HE+R
Sbjct: 299 VADQVAVALSHAAILEE--SMRARDLLMEQNVALDMARREAETAIRARNDFLAVMNHEMR 356
Query: 383 SPLTGVVSMAEILSNTKLDREQRQLLGVMISSGDLVLQLINDILDLSKVESGVMKLEAAK 442
+P+ +++++ +L T+L EQR ++ ++ S +L+ LIND+LDLS++E G ++L+
Sbjct: 357 TPMHAIIALSSLLQETELTPEQRLMVETVLKSSNLLATLINDVLDLSRLEDGSLQLDIGT 416
Query: 443 FRPREVVK--HVLQTAAASLQKILMLEGDIADDVPIEVIGDVLRIRQILTNLISNAIKFT 500
F +++ H L AS++K L + ++A D+P +GD R+ QI+ N++ NA+KF+
Sbjct: 417 FNLHALLREVHNLIKPIASVKK-LCISLNVATDLPEYAVGDEKRLVQIILNVVGNAVKFS 475
Query: 501 PEGKVGIKLYVVPEPPFAKEGLKQKSKAYQSATDAVKEEKHQPKSQTASDQNGFHDKKHG 560
EG + I A+ + ++++++ + P +N F
Sbjct: 476 KEGNISIT-------------------AFVAKSESLRDPR-APDFFPICGENQF------ 509
Query: 561 EGYQDHKHDDDPGTPVSHGNSMDEDLEATVWIRCDVYDTGIGIPENALPTLFRKYMQVSA 620
++R V D+G+GI +P LF K+ Q
Sbjct: 510 ------------------------------YLRVQVKDSGLGINPQDIPRLFTKFAQTQP 539
Query: 621 DHARKYGGTGLGLAICKQLVELMGGRLTVTSKVHC-GSTFTFILPYQVSPIEENSDDPDD 679
+ GG+GLGLAICK+ V LM G + + S+ G T TF++ I E S +P
Sbjct: 540 VATKNSGGSGLGLAICKRFVNLMEGHIWIDSEGPGKGCTATFVVKLG---IPERSSEPKL 596
Query: 680 L 680
L
Sbjct: 597 L 597
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 25/142 (17%)
Query: 861 KILLVEDNKINVMVAKSMMKQLGHSIDVVNNGVEAVHAVQCQNYDLILMDVCMPVMDGLK 920
K+LL++DN ++ V + ++ LG + V++ E + V Q+Y ++ MDVCMP +DG +
Sbjct: 615 KVLLLDDNGVSRAVTRGLLAHLGCDVTTVSSSDELLRVVS-QDYKVVFMDVCMPEVDGFE 673
Query: 921 -ATRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNHFKRIPIIAMTANALSESAEECFANG 979
A R+ F + H +R I+A+T N + + C G
Sbjct: 674 IAVRIHEKF----------------------MTRH-ERPLIVALTGNIDQVTKDNCTRVG 710
Query: 980 MDSFVSKPVTFQKLKECLEQYF 1001
M+ V KPV+ K++ L
Sbjct: 711 MEGVVLKPVSIDKMRNVLSNLL 732
>sp|O81122|ETR1_MALDO Ethylene receptor OS=Malus domestica GN=ETR1 PE=2 SV=1
Length = 741
Score = 130 bits (326), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 165/344 (47%), Gaps = 69/344 (20%)
Query: 330 VTDQVRKREKMAKLREEIAVQKAKETELNKTIHI------TEETMRAKQ-MLATMSHEIR 382
V DQV A + EE +A++ + + I + E +RA+ LA M+HE+R
Sbjct: 299 VADQVAVALSHAAILEE--SMRARDLLMEQNIALDLARREAETAIRARNDFLAVMNHEMR 356
Query: 383 SPLTGVVSMAEILSNTKLDREQRQLLGVMISSGDLVLQLINDILDLSKVESGVMKLEAAK 442
+P+ +++++ +L T+L EQR ++ ++ S +L+ LIND+LDLS++E G ++LE A
Sbjct: 357 TPMHAIIALSSLLQETELTAEQRLMVETILRSSNLLATLINDVLDLSRLEDGSLQLEIAT 416
Query: 443 FRPREVVK--HVLQTAAASLQKILMLEGDIADDVPIEVIGDVLRIRQILTNLISNAIKFT 500
F V + H + AS+++ L + +IA D+P+ IGD R+ Q + N++ NA+KF+
Sbjct: 417 FNLHSVFREVHNMIKPVASIKR-LSVTLNIAADLPMYAIGDEKRLMQTILNVVGNAVKFS 475
Query: 501 PEGKVGIKLYVVPEPPFAKEGLKQKSKAYQSATDAVKEEKHQPKSQTASDQNGFHDKKHG 560
KEG + F K
Sbjct: 476 ------------------KEG--------------------------SISITAFVAK--S 489
Query: 561 EGYQDHKHDDDPGTPVSHGNSMDEDLEATVWIRCDVYDTGIGIPENALPTLFRKYMQVSA 620
E +D + D PV N ++R V D+G GI +P LF K+ Q A
Sbjct: 490 ESLRDFRAPD--FFPVQSDNHF--------YLRVQVKDSGSGINPQDIPKLFTKFAQTQA 539
Query: 621 DHARKYGGTGLGLAICKQLVELMGGRLTVTSK-VHCGSTFTFIL 663
R GG+GLGLAICK+ V LM G + + S+ + G T TFI+
Sbjct: 540 LATRNSGGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTATFIV 583
Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 25/145 (17%)
Query: 858 PKPKILLVEDNKINVMVAKSMMKQLGHSIDVVNNGVEAVHAVQCQNYDLILMDVCMPVMD 917
P K+L+++DN ++ V K ++ LG + V+ E +H + Q + ++ MDV MP +D
Sbjct: 612 PGLKVLVMDDNGVSRSVTKGLLAHLGCDVTAVSLIDELLHVIS-QEHKVVFMDVSMPGID 670
Query: 918 GLK-ATRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNHFKRIPIIAMTANALSESAEECF 976
G + A R+ F + +R ++A+T + + E C
Sbjct: 671 GYELAVRIHEKF-----------------------TKRHERPVLVALTGSIDKITKENCM 707
Query: 977 ANGMDSFVSKPVTFQKLKECLEQYF 1001
G+D + KPV+ K++ L +
Sbjct: 708 RVGVDGVILKPVSVDKMRSVLSELL 732
>sp|Q54W36|DHKH_DICDI Hybrid signal transduction histidine kinase H OS=Dictyostelium
discoideum GN=dhkH PE=3 SV=1
Length = 1378
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/318 (31%), Positives = 149/318 (46%), Gaps = 38/318 (11%)
Query: 373 MLATMSHEIRSPLTGVVSMAEILSNT--KLDREQRQLLGVMISSGDLVLQLINDILDLSK 430
L TMSHE+R+PL G++ + LS + +L EQ + + +L LIN+ILDLSK
Sbjct: 495 FLQTMSHEMRTPLAGIMGINSWLSTSSPQLTSEQLDGCHTIDMCAEALLVLINNILDLSK 554
Query: 431 VESGVMKLEAAKFRPREVVKHVLQTAAASL-QKILMLEGDIADDVPIEVIGDVLRIRQIL 489
+E + LE +F P ++V+ + ++ QK L + + + +V+GD RIRQ+L
Sbjct: 555 LEENKIILEETEFYPTKIVEDSVDILSSQAEQKKLDIIFQLKYNCLSKVVGDFYRIRQVL 614
Query: 490 TNLISNAIKFTPEGK---VGIKLYVVPEPPFAKEG-------------LKQKSKAYQSAT 533
TNLISN++KFTP VG ++Y P K +
Sbjct: 615 TNLISNSVKFTPANGQIIVGCEIYHETTPSTRKRSSLDSIEITIPCNHNNSNNSNNNHNH 674
Query: 534 DAVKEEKHQPKSQTASDQNGFHDKKHGEGYQ--------DHKHDDDPGTPVSHGNSMDED 585
+ + + + NGF+ H + D D P +G +
Sbjct: 675 NNNNNNNNHLNCSGSFNNNGFNHGHHHHHHHHHHHHHHHDKHCDQKIIVPGKYGKLL--- 731
Query: 586 LEATVWIRCDVYDTGIGIPENALPTLFRKYMQVSADHARKYGGTGLGLAICKQLVELMGG 645
W V D GIGIPE LF+ + Q A RKYGG+GLGLAI K+L +L+GG
Sbjct: 732 ----FW----VIDNGIGIPEEGREKLFQTFSQYDASTTRKYGGSGLGLAISKRLTQLLGG 783
Query: 646 RLTVTSKVHCGSTFTFIL 663
+ S+ GS+F F++
Sbjct: 784 DIWFESQKGKGSSFHFLV 801
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 28/132 (21%)
Query: 861 KILLVEDNKINVMVAKSMMKQLGHS---IDVVNNGVEAV-HAVQCQNYDLILMDVCMPVM 916
KI++ ED+ +N VA + +LG+ I V NG +A+ H + D+ILMD+ MP +
Sbjct: 1244 KIMVAEDSLVNQKVACRFLTKLGYKKEEIIFVVNGQQAIDHIENVEMVDVILMDMQMPEV 1303
Query: 917 DGLKATRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNHFKRIPIIAMTANALSESAEECF 976
DG +AT IR P++G II +TANA +E ++C
Sbjct: 1304 DGCEATTRIR-----------------MRYPTTGPH-------IIGLTANAFNEDKDKCL 1339
Query: 977 ANGMDSFVSKPV 988
+GM +++KPV
Sbjct: 1340 LSGMCHYLAKPV 1351
>sp|O49187|ETR2_SOLLC Ethylene receptor 2 OS=Solanum lycopersicum GN=ETR2 PE=2 SV=1
Length = 736
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 145/303 (47%), Gaps = 61/303 (20%)
Query: 365 EETMRAKQ-MLATMSHEIRSPLTGVVSMAEILSNTKLDREQRQLLGVMISSGDLVLQLIN 423
E +RA+ L M+HE+R+P+ VV+++ +L ++L EQR ++ ++ S +L+ LIN
Sbjct: 336 ETAVRARNDFLGVMNHEMRTPMHAVVALSSLLQESELIPEQRLMVETILKSSNLLATLIN 395
Query: 424 DILDLSKVESGVMKLEAAKFRPREVVKHVLQTA--AASLQKILMLEGDIADDVPIEVIGD 481
D+LDLS++E G ++L+ F + + VL A+++K L + ++ D P IGD
Sbjct: 396 DVLDLSRLEDGSLQLDVGTFNLHALFREVLNLIKPVAAVKK-LFVTLSLSSDFPEVAIGD 454
Query: 482 VLRIRQILTNLISNAIKFTPEGKVGIKLYVVPEPPFAKEGLKQKSKAYQSATDAVKEEKH 541
R+ QIL N++ NA+KF+ EG V + SA +A E
Sbjct: 455 EKRLMQILLNVVGNAVKFSKEGSVSV-----------------------SAVNAKSESLI 491
Query: 542 QPKSQTASDQNGFHDKKHGEGYQDHKHDDDPGTPVSHGNSMDEDLEATVWIRCDVYDTGI 601
P++ E + PV N ++R V DTG
Sbjct: 492 DPRAP--------------EFF-----------PVQSENHF--------YLRVQVKDTGS 518
Query: 602 GIPENALPTLFRKYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVTSK-VHCGSTFT 660
GI P LF K+ Q + GTGLGLAICK+ V LM G + + S+ V GST
Sbjct: 519 GINPQDFPKLFCKFAQNQEPATKNSAGTGLGLAICKRFVNLMEGHIWIESEGVGKGSTAI 578
Query: 661 FIL 663
FI+
Sbjct: 579 FIV 581
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 71/164 (43%), Gaps = 26/164 (15%)
Query: 837 PDRISQSPSSSSAEVPETKPKPK---PKILLVEDNKINVMVAKSMMKQLGHSIDVVNNGV 893
P R+++S +A +P + K+L+++DN + MV KS++ LG + + +G
Sbjct: 586 PGRLNESKLPFTAGLPANHMQMTFQGLKVLVMDDNGFSRMVTKSLLVHLGCDVTTIGSGD 645
Query: 894 EAVHAVQCQNYDLILMDVCMPVMDGLKATRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSN 953
E + + + + +++MD + M+ +D A
Sbjct: 646 ECLR-ILTREHKVLIMDASITGMNC---------------YDVAVSV-------HEKFGK 682
Query: 954 HFKRIPIIAMTANALSESAEECFANGMDSFVSKPVTFQKLKECL 997
+R I+A+T N + E C GMD + KPV+ K++ L
Sbjct: 683 RLERPLIVALTGNTDQVTKENCLRVGMDGVILKPVSIDKMRSVL 726
>sp|O82436|ETR1_CUCMN Ethylene receptor 1 OS=Cucumis melo var. cantalupensis GN=ETR1 PE=2
SV=1
Length = 740
Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 176/394 (44%), Gaps = 85/394 (21%)
Query: 330 VTDQVRKREKMAKLREEIAVQKAKETELNKTIHI------TEETMRAKQ-MLATMSHEIR 382
V DQV A + EE +A++ + + + + E +RA+ LA M+HE+R
Sbjct: 299 VADQVAVALSHAAILEE--SMRARDLLMEQNVALDLARREAETAIRARNDFLAVMNHEMR 356
Query: 383 SPLTGVVSMAEILSNTKLDREQRQLLGVMISSGDLVLQLINDILDLSKVESGVMKLEAAK 442
+P+ +++++ +L T+L EQR ++ ++ S +L+ LIND+LDLS++E G ++L+
Sbjct: 357 TPMHAIIALSSLLQETELTPEQRLMVETILKSSNLLATLINDVLDLSRLEDGSLQLDIGT 416
Query: 443 FRPREVVKHVLQ-TAAASLQKILMLEGDIADDVPIEVIGDVLRIRQILTNLISNAIKFTP 501
F V K VL +L K L L + D+P+ +GD R+ Q + N++ NA+KF+
Sbjct: 417 FNLHAVFKEVLNLIKPVTLVKKLSLTLHLGPDLPVFAVGDEKRLMQAILNVVGNAVKFSK 476
Query: 502 EGKVGIKLYVVPEPPFAKEGLKQKSKAYQSATDAVKEEKHQPKSQTASDQNGFHDKKHGE 561
EG + I V KS+ ++ E P FH
Sbjct: 477 EGSISISAIV------------AKSETFR--------EIRVPD---------FHPVPSDS 507
Query: 562 GYQDHKHDDDPGTPVSHGNSMDEDLEATVWIRCDVYDTGIGIPENALPTLFRKYMQVSAD 621
+ D G+ +S P++ +P LF K+ Q +
Sbjct: 508 HFYLRVQVKDTGSGIS--------------------------PQD-IPKLFTKFAQTTVG 540
Query: 622 HARKYGGTGLGLAICKQLVELMGGRLTVTSK-VHCGSTFTFI-------------LPYQV 667
R GG+GLGLAICK+ V LM G + + S+ + G T TFI LPY
Sbjct: 541 -PRNSGGSGLGLAICKRFVNLMEGHIWLESEGLGKGCTATFIVKLGIADQSNESKLPYT- 598
Query: 668 SPIEENS---DDPDDLSDMADQDSVTDDVTAGFF 698
S I ENS P + D + V+ VT G
Sbjct: 599 SKIHENSIHTSFPGLKVLVMDDNGVSRSVTKGLL 632
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 25/143 (17%)
Query: 858 PKPKILLVEDNKINVMVAKSMMKQLGHSIDVVNNGVEAVHAVQCQNYDLILMDVCMPVMD 917
P K+L+++DN ++ V K ++ LG + + +E V Q + ++ MD+C P +D
Sbjct: 611 PGLKVLVMDDNGVSRSVTKGLLVHLGCEVTTAGS-IEEFLRVVSQEHKVVFMDICTPGVD 669
Query: 918 GLK-ATRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNHFKRIPIIAMTANALSESAEECF 976
G + A R+ F + +R ++ +T N+ + E C
Sbjct: 670 GYELAIRIREKF-----------------------AKCHERPFMVVLTGNSDKVTKESCL 706
Query: 977 ANGMDSFVSKPVTFQKLKECLEQ 999
GMD + KPV+ K++ L +
Sbjct: 707 RAGMDGLILKPVSIDKMRSVLSE 729
>sp|Q9ZWL6|ETR1_PASED Ethylene receptor OS=Passiflora edulis GN=ETR1 PE=2 SV=1
Length = 738
Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 174/365 (47%), Gaps = 70/365 (19%)
Query: 330 VTDQVRKREKMAKLREEIAVQKAKETELNKTIHI------TEETMRAKQ-MLATMSHEIR 382
V DQV A + EE +A++ + + + + E +RA+ LA M+HE+R
Sbjct: 299 VADQVAVALSHAAILEE--SMRARDLLMEQNVALDLARREAETAIRARNDFLAVMNHEMR 356
Query: 383 SPLTGVVSMAEILSNTKLDREQRQLLGVMISSGDLVLQLINDILDLSKVESGVMKLEAAK 442
+P+ V++++ +L T+L EQR ++ ++ S +L+ LIND+LDLSK+E G ++L++
Sbjct: 357 TPMHAVIALSSLLQETELTPEQRLMVETILKSSNLLATLINDVLDLSKLEDGSLQLDSGT 416
Query: 443 FRPREVVKHVLQTA--AASLQKILMLEGDIADDVPIEVIGDVLRIRQILTNLISNAIKFT 500
F V + VL AS++K+L+ ++A D+P +GD R+ QI+ N++ NA+KF
Sbjct: 417 FNLHAVFREVLNLIKPIASVKKLLL-LLNLAPDLPEYAVGDEKRLIQIILNIVGNAMKF- 474
Query: 501 PEGKVGIKLYVVPEPPFAKEGLKQKSKAYQSATDAVKEEKHQPKSQTASDQNGFHDKKHG 560
+KEG S T V +
Sbjct: 475 -----------------SKEG-------SISITAIVAKL--------------------- 489
Query: 561 EGYQDHKHDDDPGTPVSHGNSMDEDLEATVWIRCDVYDTGIGIPENALPTLFRKYMQVSA 620
E +D + D TP E ++R V D+G+GI +P LF K+ Q
Sbjct: 490 ESLRDARVPDFFPTPS----------ENHFYLRVQVKDSGVGINPQDIPKLFIKFAQTQT 539
Query: 621 DHARKYGGTGLGLAICKQLVELMGGRLTVTSK-VHCGSTFTFILPYQVSPIEENSDDPDD 679
AR G+GLGLAIC++ V LM G + + S+ + G T FI+ + P N P
Sbjct: 540 TGARNSSGSGLGLAICRRFVNLMDGHIWLESEGLGKGCTAIFIVKLGI-PERLNESKPPF 598
Query: 680 LSDMA 684
+S +A
Sbjct: 599 MSKVA 603
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 30/165 (18%)
Query: 837 PDRISQS--PSSSSAEVPETKPK-PKPKILLVEDNKINVMVAKSMMKQLGHSIDVVNNGV 893
P+R+++S P S V + P K+LL++DN ++ MV K ++ LG + V +
Sbjct: 588 PERLNESKPPFMSKVAVDHGQTTFPGLKVLLMDDNGVSRMVTKGLLLHLGCDVTTVGSSE 647
Query: 894 EAVHAVQCQNYDLILMDVCMPVMDGLKA-TRLIRSFEDTGNWDAAAEAGIEQAMPSSGSS 952
E + V Q++ ++ MDV MP +G +A RL F +
Sbjct: 648 ECIR-VASQDHRVVFMDVGMP--EGFEAAVRLHEKF-----------------------T 681
Query: 953 NHFKRIPIIAMTANALSESAEECFANGMDSFVSKPVTFQKLKECL 997
+R ++A+TA+ + E C GMD + KPV+ K++ L
Sbjct: 682 KRHERPLVVALTASTDRMTKENCMRVGMDGAILKPVSVDKMRSVL 726
>sp|Q54Q69|DHKG_DICDI Hybrid signal transduction histidine kinase G OS=Dictyostelium
discoideum GN=dhkG PE=3 SV=1
Length = 3432
Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 164/375 (43%), Gaps = 42/375 (11%)
Query: 308 IYVEPVFSKSGETIGVNYMGMDVTDQVRKREKMAKLR---EEIAVQKAKETELNKTIHIT 364
I V P+ + G + + Y+ + + + EK+ L +IA+ + K +
Sbjct: 2410 ILVLPIVYQ-GNLVSILYLENNFSTGIFSNEKLEILNLISSQIAISFSNARLFIKVNQLA 2468
Query: 365 EETMRAKQ-----------MLATMSHEIRSPLTGVVSMAEILS--NTKLDREQRQLLGVM 411
+ AK+ ++ MSHE+R+PL ++ E+L N + +Q++LL +
Sbjct: 2469 NQAFLAKEEAEKANKAKSDFISNMSHEMRTPLNHIIGSIELLKSYNHLFNSDQKELLDIS 2528
Query: 412 ISSGDLVLQLINDILDLSKVESGVMKLEAAKFRPREVVKHVLQTAA--ASLQ--KILMLE 467
S + +L ++N+ILDLSKVE G KL F ++ + + A L+ I +
Sbjct: 2529 AKSSESLLFMVNNILDLSKVEQGKTKLNLTNFNLVSFLEDSICAISPNAHLKGVYIALFI 2588
Query: 468 GDIADDVPIEVIGDVLRIRQILTNLISNAIKFTPEGKVGIKLYVVPEPPFAKEGLKQKSK 527
+P VIGD+ +RQ++ NL++NAIKFT G+V IKL + K++
Sbjct: 2589 NPCLSKIP--VIGDINILRQVIVNLLTNAIKFTESGQVYIKLNLSINNNPTTTNNKKQLN 2646
Query: 528 AYQSATDAVKEEKHQPKSQTASDQNGFHDKKHGEGYQDHKHDDDPGTPVSHGNSMDEDLE 587
D ++ DD G + N
Sbjct: 2647 TDNDGDDDDDDDNENLDENNEDTSIDL---------------DDNGKVIYQKNPKSNQ-- 2689
Query: 588 ATVWIRCDVYDTGIGIPENALPTLFRKYMQVSADHARKYGGTGLGLAICKQLV-ELMGGR 646
+ +V D+GIGI LF+++ Q+ R Y GTGLGL+I K LV LM G
Sbjct: 2690 -CYIVNIEVVDSGIGIKNEDFGKLFQRFSQIECGSNRAYDGTGLGLSIVKDLVCNLMKGD 2748
Query: 647 LTVTSKVHCGSTFTF 661
+ V SKV GSTF F
Sbjct: 2749 IGVKSKVGVGSTFHF 2763
Score = 86.7 bits (213), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 77/144 (53%), Gaps = 25/144 (17%)
Query: 861 KILLVEDNKINVMVAKSMMKQLGHSID--VVNNGVEAVHAVQCQNYDLILMDVCMPVMDG 918
KIL+VEDN++N + M+ +LG + + NG+E V + + YDLI+MD+ MPVM G
Sbjct: 3305 KILIVEDNEMNANIMFKMLAKLGIQCEPHLALNGLEGVKKAKNEEYDLIIMDIQMPVMCG 3364
Query: 919 LKATRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNHFKRIPIIAMTANALSESAEECFAN 978
L AT LIR E T KR PI+A+TA+A++ + A
Sbjct: 3365 LTATSLIRKHEGTK-----------------------KRTPIVAITASAMNGEMSKALAA 3401
Query: 979 GMDSFVSKPVTFQKLKECLEQYFP 1002
G D ++SKP+ + L+ + +Y P
Sbjct: 3402 GCDDYLSKPLQLKDLRYVINRYGP 3425
>sp|Q9SXL4|AHK1_ARATH Histidine kinase 1 OS=Arabidopsis thaliana GN=AHK1 PE=1 SV=2
Length = 1207
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 145/313 (46%), Gaps = 45/313 (14%)
Query: 372 QMLATMSHEIRSPLTGVVSMAEIL-SNTKLDREQRQLLGVMISSGDLVLQLINDILDLSK 430
Q LA MSHE+R+P+ V+ + +IL S+ L EQ + + +L+L+N+ILDLSK
Sbjct: 501 QFLANMSHELRTPMAAVIGLLDILISDDCLSNEQYATVTQIRKCSTALLRLLNNILDLSK 560
Query: 431 VESGVMKLEAAKF-RPREVVKHV----LQTAAASLQKILMLEGDIADDVPIEVIGDVLRI 485
VESG + LE A+F RE+ V +Q +++ +L D++DD+P V GD R+
Sbjct: 561 VESGKLVLEEAEFDLGRELEGLVDMFSVQCINHNVETVL----DLSDDMPALVRGDSARL 616
Query: 486 RQILTNLISNAIKFTPEGKVGIKLYVVPEPPFAKEGLKQKSKAYQSATDAVKEEKHQPKS 545
QI NLISN+IKFT G + ++ + + + + + +V K
Sbjct: 617 VQIFANLISNSIKFTTTGHIILRGWC-----------ENINSLHDEMSVSVDRRKPWAPM 665
Query: 546 QTASDQNGFHDKKHGEGYQDHKHDDDPGTPVSHGNSMDEDLEATVWIRCDVYDTGIGIPE 605
+T Q+ H +K + N M +W D DTG GI
Sbjct: 666 KTKQVQHRNHLQK----------------SCKNANKM------VLWFEVD--DTGCGIDP 701
Query: 606 NALPTLFRKYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVTSKVHCGSTFTFILPY 665
+ ++F + Q R +GGTGLGL I + LV MGG + V K G+ L
Sbjct: 702 SKWDSVFESFEQADPSTTRTHGGTGLGLCIVRNLVNKMGGEIKVVQKNGLGTLMRLYLIL 761
Query: 666 QVSPIEENSDDPD 678
+ + PD
Sbjct: 762 STPDTVDQNIQPD 774
Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 55/161 (34%)
Query: 861 KILLVEDNKINVMVAKSMMKQLGHSIDVVNNGVEAVHAVQCQN----------------- 903
+ILL ED + VA M++++G ++ V +G +AV ++ ++
Sbjct: 1045 RILLAEDTPVLQRVATIMLEKMGATVTAVWDGQQAVDSLNYKSINAQAPTEEHKSFEEET 1104
Query: 904 ----------------YDLILMDVCMPVMDGLKATRLIRSFEDTGNWDAAAEAGIEQAMP 947
YDLILMD MP MDG +AT+ IR AE G E
Sbjct: 1105 ANKVTTRETSLRNSSPYDLILMDCQMPKMDGYEATKAIRR----------AEIGTEL--- 1151
Query: 948 SSGSSNHFKRIPIIAMTANALSESAEECFANGMDSFVSKPV 988
IPI+A+TA+A+S +C GMD++++KP+
Sbjct: 1152 ---------HIPIVALTAHAMSSDEAKCLEVGMDAYLTKPI 1183
>sp|O48929|ETR1_TOBAC Ethylene receptor OS=Nicotiana tabacum GN=ETR1 PE=2 SV=1
Length = 738
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 156/344 (45%), Gaps = 69/344 (20%)
Query: 330 VTDQVRKREKMAKLREEIAVQKAKETELNKTIHI------TEETMRAKQ-MLATMSHEIR 382
V DQV A + EE +A++ + + + + E +RA+ LA M+HE+R
Sbjct: 297 VADQVAVALSHAAILEE--SMRARDLLMEQNVALDLARREAEMAVRARNDFLAVMNHEMR 354
Query: 383 SPLTGVVSMAEILSNTKLDREQRQLLGVMISSGDLVLQLINDILDLSKVESGVMKLEAAK 442
+P+ +++++ +L T+L EQR ++ ++ S +L+ LIND+LDLS++E G ++L+
Sbjct: 355 TPMHAIIALSSLLQETELTPEQRLMVETILKSSNLLATLINDVLDLSRLEDGSLQLDVGT 414
Query: 443 FRPREVVKHVLQTA--AASLQKILMLEGDIADDVPIEVIGDVLRIRQILTNLISNAIKFT 500
F + + VL AS++ L P IGD R+ QIL N++ NA+KF+
Sbjct: 415 FNLHVLFRKVLNLIKPIASVKNCLS-RLTCLQICPEFAIGDEKRLMQILLNVVGNAVKFS 473
Query: 501 PEGKVGIKLYVVPEPPFAKEGLKQKSKAYQSATDAVKEEKHQPKSQTASDQNGFHDKKHG 560
EG V I S A+ D +
Sbjct: 474 KEGSVSI-------------------------------------SAVAAKSESLSDPRAP 496
Query: 561 EGYQDHKHDDDPGTPVSHGNSMDEDLEATVWIRCDVYDTGIGIPENALPTLFRKYMQVSA 620
E + PV N ++R V DTG GI +P LF K+ Q A
Sbjct: 497 EFF-----------PVQSENHF--------YLRVQVKDTGSGINPQDIPKLFCKFAQNQA 537
Query: 621 DHARKYGGTGLGLAICKQLVELMGGRLTVTSK-VHCGSTFTFIL 663
+ GGTGLGLAI K+ V LM G + + S+ + GST FI+
Sbjct: 538 LATKSSGGTGLGLAISKRFVNLMEGHIWIESEGLGKGSTAIFIV 581
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 23/141 (16%)
Query: 861 KILLVEDNKINVMVAKSMMKQLGHSIDVVNNGVEAVHAVQCQNYDLILMDVCMPVMDGLK 920
K+L+++DN + MV K ++ LG + V++G E + V Q + ++ MDV +P +D +
Sbjct: 613 KVLIMDDNGFSRMVTKGLLVHLGCDVTTVSSGDECLR-VLTQEHKVVFMDVSIPGIDCYE 671
Query: 921 ATRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNHFKRIPIIAMTANALSESAEECFANGM 980
++ E G H R I+A+T N + E C GM
Sbjct: 672 VA--VQIHEKFGK--------------------HHNRPLIVALTGNTDRVTKENCMRVGM 709
Query: 981 DSFVSKPVTFQKLKECLEQYF 1001
D + KPV+ K++ L +
Sbjct: 710 DGVILKPVSVDKMRSVLSELL 730
>sp|Q9SSY6|ETR1_CUCSA Ethylene receptor 1 OS=Cucumis sativus GN=ETR1 PE=2 SV=1
Length = 740
Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 150/344 (43%), Gaps = 76/344 (22%)
Query: 373 MLATMSHEIRSPLTGVVSMAEILSNTKLDREQRQLLGVMISSGDLVLQLINDILDLSKVE 432
LA M+HE+R+P+ +++++ +L T+L EQR ++ ++ S +L+ LIND+LDLS++E
Sbjct: 347 FLAVMNHEMRTPMHAIIALSSLLQETELTPEQRLMVETILKSSNLLATLINDVLDLSRLE 406
Query: 433 SGVMKLEAAKFRPREVVKHVLQ-TAAASLQKILMLEGDIADDVPIEVIGDVLRIRQILTN 491
G ++L+ F V K VL +L K L L + D+P+ +GD R+ Q + N
Sbjct: 407 DGSLQLDIGTFNLHAVFKEVLNLIKPVTLVKKLSLTLHLGLDLPVFAVGDEKRLMQAILN 466
Query: 492 LISNAIKFTPEGKVGIKLYVVPEPPFAKEGLKQKSKAYQSATDAVKEEKHQPKSQTASDQ 551
++ NA+KF+ EG + I V F E P
Sbjct: 467 VVGNAVKFSKEGSISISAIVAKAETF--------------------REIRVPD------- 499
Query: 552 NGFHDKKHGEGYQDHKHDDDPGTPVSHGNSMDEDLEATVWIRCDVYDTGIGIPENALPTL 611
FH + D G+ +S P++ +P L
Sbjct: 500 --FHPVPSDSHFYLRVQVKDTGSGIS--------------------------PQD-IPKL 530
Query: 612 FRKYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVTSK-VHCGSTFTFI-------- 662
F K+ Q + R G+GLGLAICK+ V LM G + + S+ + G T TFI
Sbjct: 531 FTKFAQTTVG-PRNSCGSGLGLAICKRFVNLMEGHIWLESEGLGKGCTATFIVKLGIAEQ 589
Query: 663 -----LPYQVSPIEENS---DDPDDLSDMADQDSVTDDVTAGFF 698
LP+ S I ENS P + D + V+ VT G
Sbjct: 590 SNESKLPFT-SKIHENSIHTSFPGLKVLVMDDNGVSRSVTKGLL 632
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 25/143 (17%)
Query: 858 PKPKILLVEDNKINVMVAKSMMKQLGHSIDVVNNGVEAVHAVQCQNYDLILMDVCMPVMD 917
P K+L+++DN ++ V K ++ LG + + +E V Q + ++ MD+C P +D
Sbjct: 611 PGLKVLVMDDNGVSRSVTKGLLVHLGCEVTTAGS-IEEFLRVVSQEHKVVFMDICTPGVD 669
Query: 918 GLK-ATRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNHFKRIPIIAMTANALSESAEECF 976
G + A R+ F + +R ++ +T N+ + E C
Sbjct: 670 GYELAIRIREKF-----------------------AKCHERPFMVVLTGNSDKVTKESCL 706
Query: 977 ANGMDSFVSKPVTFQKLKECLEQ 999
GMD + KPV+ K++ L +
Sbjct: 707 RAGMDGLILKPVSIDKMRSVLSE 729
>sp|Q54U87|DHKA_DICDI Hybrid signal transduction histidine kinase A OS=Dictyostelium
discoideum GN=dhkA PE=1 SV=1
Length = 2150
Score = 113 bits (282), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 149/321 (46%), Gaps = 70/321 (21%)
Query: 365 EETMRAKQ-MLATMSHEIRSPLTGVVSMAEILSNTKLDREQRQLLGVMISSGDLVLQLIN 423
EE +AK +AT+SHE+R+PL+GV+ ++++L T L EQR + + S +L +IN
Sbjct: 1381 EEANKAKSAFVATVSHEVRTPLSGVIGVSDLLLETNLSEEQRDYVQTIQKSSQALLTIIN 1440
Query: 424 DILDLSKVESGVMKLEAAKFRPREVVKHVLQTAAASLQKILMLEGDIADDVPIEVIGDVL 483
DILD SK+ES +K+E F +++T A + ML DDV D+L
Sbjct: 1441 DILDYSKLESRQLKMETLPFS-------IIETCQAVIH---MLSVAANDDV------DIL 1484
Query: 484 RIRQILTNLISNAIKFTPEGKVGIKLYVVPEPPFAKEGLKQKSKAYQSATDAVKEEKHQP 543
++ P VP F + ++ + ++A+K
Sbjct: 1485 -------------LRVPPN---------VPRIIFG-DAMRMRQVLLNLLSNAIK------ 1515
Query: 544 KSQTASDQNGFHDKKHGEGYQDHKHDDDPGTPVSHGNSMDEDLEATVWIRCDVYDTGIGI 603
F + H D DD + N+ +E + + I DTGIGI
Sbjct: 1516 ----------FTSRGHV--LTDISVDDS----IPPTNTEEEIIHLCITIE----DTGIGI 1555
Query: 604 PENALPTLFRKYMQVSADHARKYGGTGLGLAICKQLV-ELMGGRLTVTSKVHCGSTFTFI 662
P++ ++F + Q RKYGGTGLGL+I K+L+ E+MGG + V+S V GS F I
Sbjct: 1556 PQSLFDSIFEPFSQADNSTTRKYGGTGLGLSITKRLIEEVMGGTIQVSSIVGQGSKFKCI 1615
Query: 663 LPY---QVSPIEENSDDPDDL 680
+P+ SP + N P L
Sbjct: 1616 IPFLLPNTSPSDLNLISPSSL 1636
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 79/146 (54%), Gaps = 22/146 (15%)
Query: 856 PKPKPKILLVEDNKINVMVAKSMMKQLGHSIDVVNNGVEAVHAVQCQN-YDLILMDVCMP 914
P + K L+VEDN++N V + K++ +I NG EA+ + + +D++ MD MP
Sbjct: 2021 PAYRKKALIVEDNELNRKVLAQLFKKIDWTISFAENGREALKEITGERCFDIVFMDCQMP 2080
Query: 915 VMDGLKATRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNHFKRIPIIAMTANALSESAEE 974
V+DG + T++IRS E NW KR+ I+A++A + S ++
Sbjct: 2081 VLDGFQTTKIIRSKERENNW---------------------KRMNIVALSAGSSSSFVQD 2119
Query: 975 CFANGMDSFVSKPVTFQKLKECLEQY 1000
C +GMDSF+ KP+T LK+ L ++
Sbjct: 2120 CLDSGMDSFMGKPITLATLKDALAKW 2145
>sp|P14376|RCSC_ECOLI Sensor kinase protein RcsC OS=Escherichia coli (strain K12) GN=rcsC
PE=1 SV=3
Length = 949
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 140/312 (44%), Gaps = 76/312 (24%)
Query: 354 ETELNKTIHITEETMRAKQM-LATMSHEIRSPLTGVVSMAEILSNTKLDREQRQLLGVMI 412
E L + E+ ++K M LAT+SHE+R+PL G++ ++L +L + +L+ M
Sbjct: 453 EESLQEMAQAAEQASQSKSMFLATVSHELRTPLYGIIGNLDLLQTKELPKGVDRLVTAMN 512
Query: 413 SSGDLVLQLINDILDLSKVESGVMKLEAAKFRPREVVKHVLQTAAASLQKILMLEGDIAD 472
+S L+L++I+DILD SK+ES +K+E +F PREV+ H+
Sbjct: 513 NSSSLLLKIISDILDFSKIESEQLKIEPREFSPREVMNHI-------------------- 552
Query: 473 DVPIEVIGDVLRIRQILTNLISNAIKFTPEGKVGIKLYVVPEPPFAKEGLKQKSKAYQSA 532
+N + ++G+ ++ P+ P A G
Sbjct: 553 --------------------TANYLPLVVRKQLGLYCFIEPDVPVALNG----------- 581
Query: 533 TDAVKEEKHQPKSQTASDQNGFHDKKHGEGYQDHKHDDDPGTPVSHGNSMDEDLEATVWI 592
D ++ + Q S S+ F D G V H + D D ++
Sbjct: 582 -DPMRLQ--QVISNLLSNAIKFTDT---------------GCIVLHVRA-DGD-----YL 617
Query: 593 RCDVYDTGIGIPENALPTLFRKYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVTSK 652
V DTG+GIP + LF + QV R + GTGLGLAIC++L+ +M G ++V S+
Sbjct: 618 SIRVRDTGVGIPAKEVVRLFDPFFQVGTGVQRNFQGTGLGLAICEKLISMMDGDISVDSE 677
Query: 653 VHCGSTFTFILP 664
GS FT +P
Sbjct: 678 PGMGSQFTVRIP 689
Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 26/139 (18%)
Query: 862 ILLVEDNKINVMVAKSMMKQLGHSIDVVNNGVEAVHAVQCQNYDLILMDVCMPVMDGLKA 921
IL+V+D+ IN + + LG+ N+GV+A++ + + D++L DV MP MDG +
Sbjct: 827 ILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNHIDIVLSDVNMPNMDGYRL 886
Query: 922 TRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNHFKRIPIIAMTANALSESAEECFANGMD 981
T+ IR T +P+I +TANAL+E + C +GMD
Sbjct: 887 TQRIRQLGLT--------------------------LPVIGVTANALAEEKQRCLESGMD 920
Query: 982 SFVSKPVTFQKLKECLEQY 1000
S +SKPVT +K+ L Y
Sbjct: 921 SCLSKPVTLDVIKQTLTLY 939
>sp|P0AEC5|BARA_ECOLI Signal transduction histidine-protein kinase BarA OS=Escherichia
coli (strain K12) GN=barA PE=1 SV=1
Length = 918
Score = 110 bits (274), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 106/193 (54%), Gaps = 7/193 (3%)
Query: 322 GVNYMGMDVTD-----QVRKREKMAKLREEIAVQKAKETELNKTIHITEETMRAK-QMLA 375
G+N M M + Q + + LRE + + + EL+ +E R K + LA
Sbjct: 239 GINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLA 298
Query: 376 TMSHEIRSPLTGVVSMAEILSNTKLDREQRQLLGVMISSGDLVLQLINDILDLSKVESGV 435
MSHE+R+PL GV+ + T+L QR L + S + +L +IND+LD SK+E+G
Sbjct: 299 NMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGK 358
Query: 436 MKLEAAKFRPREVVKHVLQTAA-ASLQKILMLEGDIADDVPIEVIGDVLRIRQILTNLIS 494
+ LE+ F R + V+ A +S K L L +I DVP VIGD LR++QI+TNL+
Sbjct: 359 LILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNVIGDPLRLQQIITNLVG 418
Query: 495 NAIKFTPEGKVGI 507
NAIKFT G + I
Sbjct: 419 NAIKFTENGNIDI 431
Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 50/80 (62%)
Query: 590 VWIRCDVYDTGIGIPENALPTLFRKYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTV 649
V I + DTGIGIPE LF+ + Q A +R++GGTGLGL I ++LV MGG ++
Sbjct: 443 VQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISF 502
Query: 650 TSKVHCGSTFTFILPYQVSP 669
S+ + GSTF F + ++P
Sbjct: 503 HSQPNRGSTFWFHINLDLNP 522
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 73/141 (51%), Gaps = 24/141 (17%)
Query: 862 ILLVEDNKINVMVAKSMMKQLGHSIDVVNNGVEAVHAVQCQNYDLILMDVCMPVMDGLKA 921
++ V+DN N+ + ++++ + +++ ++G +AV + +DLILMD+ MP MDG++A
Sbjct: 670 VMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQMPDMDGIRA 729
Query: 922 TRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNHFKRIPIIAMTANALSESAEECFANGMD 981
LI H ++ P+IA+TA+A++ E+ GM
Sbjct: 730 CELIHQLP------------------------HQQQTPVIAVTAHAMAGQKEKLLGAGMS 765
Query: 982 SFVSKPVTFQKLKECLEQYFP 1002
+++KP+ ++L L +Y P
Sbjct: 766 DYLAKPIEEERLHNLLLRYKP 786
>sp|P0AEC6|BARA_ECOL6 Signal transduction histidine-protein kinase BarA OS=Escherichia
coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=barA
PE=1 SV=1
Length = 918
Score = 110 bits (274), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 106/193 (54%), Gaps = 7/193 (3%)
Query: 322 GVNYMGMDVTD-----QVRKREKMAKLREEIAVQKAKETELNKTIHITEETMRAK-QMLA 375
G+N M M + Q + + LRE + + + EL+ +E R K + LA
Sbjct: 239 GINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLA 298
Query: 376 TMSHEIRSPLTGVVSMAEILSNTKLDREQRQLLGVMISSGDLVLQLINDILDLSKVESGV 435
MSHE+R+PL GV+ + T+L QR L + S + +L +IND+LD SK+E+G
Sbjct: 299 NMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGK 358
Query: 436 MKLEAAKFRPREVVKHVLQTAA-ASLQKILMLEGDIADDVPIEVIGDVLRIRQILTNLIS 494
+ LE+ F R + V+ A +S K L L +I DVP VIGD LR++QI+TNL+
Sbjct: 359 LILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNVIGDPLRLQQIITNLVG 418
Query: 495 NAIKFTPEGKVGI 507
NAIKFT G + I
Sbjct: 419 NAIKFTENGNIDI 431
Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 50/80 (62%)
Query: 590 VWIRCDVYDTGIGIPENALPTLFRKYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTV 649
V I + DTGIGIPE LF+ + Q A +R++GGTGLGL I ++LV MGG ++
Sbjct: 443 VQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISF 502
Query: 650 TSKVHCGSTFTFILPYQVSP 669
S+ + GSTF F + ++P
Sbjct: 503 HSQPNRGSTFWFHINLDLNP 522
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 73/141 (51%), Gaps = 24/141 (17%)
Query: 862 ILLVEDNKINVMVAKSMMKQLGHSIDVVNNGVEAVHAVQCQNYDLILMDVCMPVMDGLKA 921
++ V+DN N+ + ++++ + +++ ++G +AV + +DLILMD+ MP MDG++A
Sbjct: 670 VMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQMPDMDGIRA 729
Query: 922 TRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNHFKRIPIIAMTANALSESAEECFANGMD 981
LI H ++ P+IA+TA+A++ E+ GM
Sbjct: 730 CELIHQLP------------------------HQQQTPVIAVTAHAMAGQKEKLLGAGMS 765
Query: 982 SFVSKPVTFQKLKECLEQYFP 1002
+++KP+ ++L L +Y P
Sbjct: 766 DYLAKPIEEERLHNLLLRYKP 786
>sp|P0AEC7|BARA_ECO57 Signal transduction histidine-protein kinase BarA OS=Escherichia
coli O157:H7 GN=barA PE=3 SV=1
Length = 918
Score = 110 bits (274), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 106/193 (54%), Gaps = 7/193 (3%)
Query: 322 GVNYMGMDVTD-----QVRKREKMAKLREEIAVQKAKETELNKTIHITEETMRAK-QMLA 375
G+N M M + Q + + LRE + + + EL+ +E R K + LA
Sbjct: 239 GINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLA 298
Query: 376 TMSHEIRSPLTGVVSMAEILSNTKLDREQRQLLGVMISSGDLVLQLINDILDLSKVESGV 435
MSHE+R+PL GV+ + T+L QR L + S + +L +IND+LD SK+E+G
Sbjct: 299 NMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGK 358
Query: 436 MKLEAAKFRPREVVKHVLQTAA-ASLQKILMLEGDIADDVPIEVIGDVLRIRQILTNLIS 494
+ LE+ F R + V+ A +S K L L +I DVP VIGD LR++QI+TNL+
Sbjct: 359 LILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNVIGDPLRLQQIITNLVG 418
Query: 495 NAIKFTPEGKVGI 507
NAIKFT G + I
Sbjct: 419 NAIKFTENGNIDI 431
Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 50/80 (62%)
Query: 590 VWIRCDVYDTGIGIPENALPTLFRKYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTV 649
V I + DTGIGIPE LF+ + Q A +R++GGTGLGL I ++LV MGG ++
Sbjct: 443 VQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISF 502
Query: 650 TSKVHCGSTFTFILPYQVSP 669
S+ + GSTF F + ++P
Sbjct: 503 HSQPNRGSTFWFHINLDLNP 522
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 73/141 (51%), Gaps = 24/141 (17%)
Query: 862 ILLVEDNKINVMVAKSMMKQLGHSIDVVNNGVEAVHAVQCQNYDLILMDVCMPVMDGLKA 921
++ V+DN N+ + ++++ + +++ ++G +AV + +DLILMD+ MP MDG++A
Sbjct: 670 VMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQMPDMDGIRA 729
Query: 922 TRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNHFKRIPIIAMTANALSESAEECFANGMD 981
LI H ++ P+IA+TA+A++ E+ GM
Sbjct: 730 CELIHQLP------------------------HQQQTPVIAVTAHAMAGQKEKLLGAGMS 765
Query: 982 SFVSKPVTFQKLKECLEQYFP 1002
+++KP+ ++L L +Y P
Sbjct: 766 DYLAKPIEEERLHNLLLRYKP 786
>sp|P59342|BARA_SHIFL Signal transduction histidine-protein kinase BarA OS=Shigella
flexneri GN=barA PE=3 SV=1
Length = 918
Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 106/193 (54%), Gaps = 7/193 (3%)
Query: 322 GVNYMGMDVTD-----QVRKREKMAKLREEIAVQKAKETELNKTIHITEETMRAK-QMLA 375
G+N M M + Q + + LRE + + + EL+ +E R K + LA
Sbjct: 239 GINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLA 298
Query: 376 TMSHEIRSPLTGVVSMAEILSNTKLDREQRQLLGVMISSGDLVLQLINDILDLSKVESGV 435
MSHE+R+PL GV+ + T+L QR L + S + +L +IND+LD SK+E+G
Sbjct: 299 NMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGK 358
Query: 436 MKLEAAKFRPREVVKHVLQTAA-ASLQKILMLEGDIADDVPIEVIGDVLRIRQILTNLIS 494
+ LE+ F R + V+ A +S K L L +I DVP VIGD LR++QI+TNL+
Sbjct: 359 LILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNVIGDPLRLQQIITNLVG 418
Query: 495 NAIKFTPEGKVGI 507
NAIKFT G + I
Sbjct: 419 NAIKFTENGNIDI 431
Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 50/80 (62%)
Query: 590 VWIRCDVYDTGIGIPENALPTLFRKYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTV 649
V I + DTGIGIPE LF+ + Q A +R++GGTGLGL I ++LV MGG ++
Sbjct: 443 VQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISF 502
Query: 650 TSKVHCGSTFTFILPYQVSP 669
S+ + GSTF F + ++P
Sbjct: 503 HSQPNRGSTFWFHINLDLNP 522
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 73/141 (51%), Gaps = 24/141 (17%)
Query: 862 ILLVEDNKINVMVAKSMMKQLGHSIDVVNNGVEAVHAVQCQNYDLILMDVCMPVMDGLKA 921
++ V+DN N+ + ++++ + +++ ++G +AV + +DLILMD+ MP MDG++A
Sbjct: 670 VMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQMPDMDGIRA 729
Query: 922 TRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNHFKRIPIIAMTANALSESAEECFANGMD 981
LI H ++ P+IA+TA+A++ E+ GM
Sbjct: 730 CELIHQLP------------------------HQRQTPVIAVTAHAMAGQKEKLLGAGMS 765
Query: 982 SFVSKPVTFQKLKECLEQYFP 1002
+++KP+ ++L L +Y P
Sbjct: 766 DYLAKPIEEERLHNLLLRYKP 786
>sp|Q54YH4|DHKB_DICDI Hybrid signal transduction histidine kinase B OS=Dictyostelium
discoideum GN=dhkB PE=1 SV=1
Length = 1969
Score = 109 bits (273), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 131/292 (44%), Gaps = 70/292 (23%)
Query: 373 MLATMSHEIRSPLTGVVSMAEILSNTKLDREQRQLLGVMISSGDLVLQLINDILDLSKVE 432
L T+SHE+R+P+ GV++ A+IL T LD Q++ L + SG+ +L LINDILD S
Sbjct: 964 FLTTVSHELRTPINGVLASADILERTTLDSTQKEFLNCIKLSGNYLLDLINDILDYS--- 1020
Query: 433 SGVMKLEAAKFRPREVVKHVLQTAAASLQKILMLEGDIADDVPIEVIGDVLRIRQILTNL 492
K+EA K +E+I I ++L N
Sbjct: 1021 ----KIEAGK---------------------------------MEIIKYDFSILKMLDNS 1043
Query: 493 ISNAIKFTPEGKVGIKLYVVPEPPFAKEGLKQKSKAYQSATDAVKEEKHQPKSQTASDQN 552
I K E + + +++ P P G +++ K Q + + N
Sbjct: 1044 IRIVSKNIYEKGLDLCIFIDPNVPVIVNGDQRRIK--QILLNFL--------------SN 1087
Query: 553 GFHDKKHGEGYQDHKHDDDPGTPVSHGNSMDEDLEATVWIRCDVYDTGIGIPENALPTLF 612
HG+ K + D T H I+ DV D+GIGI L LF
Sbjct: 1088 SIKFTNHGQIIIRVKLESDDST---HS-----------LIKFDVEDSGIGIKTEHLNQLF 1133
Query: 613 RKYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVTSKVHCGSTFTFILP 664
+ Q+ + ++RKY GTGLGL+I K+L ++MGG + V S+ GSTF+F +P
Sbjct: 1134 ASFSQIDSGNSRKYQGTGLGLSISKRLCKMMGGDVKVKSEFGVGSTFSFTIP 1185
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 90/153 (58%), Gaps = 20/153 (13%)
Query: 836 KPDRISQSPSSSSAEVPETKPKPKPKILLVEDNKINVMVAKSMMKQLGHSIDVVNNGVEA 895
K ++I ++ +++++E E KILLVEDN +NV + ++K G+ DV +NGVEA
Sbjct: 1822 KSEKIEKTAAATTSEKIE-------KILLVEDNFVNVKIFSKLLKDSGYIFDVAHNGVEA 1874
Query: 896 VHAVQCQNYDLILMDVCMPVMDGLKATRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNHF 955
V V+ YDLILMD MP MDG +AT IR E ++ + ++ PS S+
Sbjct: 1875 VECVKKGAYDLILMDCQMPEMDGFEATTAIRELE---------KSNLIESPPSKKHSH-- 1923
Query: 956 KRIPIIAMTANALSESAEECFANGMDSFVSKPV 988
+ I+A+TAN+ + ++C + GM+ F+ KP+
Sbjct: 1924 --VVIVALTANSGYKDKQKCLSVGMNDFLQKPI 1954
>sp|Q9P896|TCSA_EMENI Two-component system protein A OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=tcsA
PE=3 SV=2
Length = 682
Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 93/146 (63%), Gaps = 1/146 (0%)
Query: 365 EETMRAKQ-MLATMSHEIRSPLTGVVSMAEILSNTKLDREQRQLLGVMISSGDLVLQLIN 423
EE+ R K LA +SHEIR+P+ G+ +L++T L EQR+ ++ S L+LQ++N
Sbjct: 295 EESSRLKTDFLANISHEIRTPMNGMQIALTMLTDTGLSEEQREHANIVQDSMSLLLQIVN 354
Query: 424 DILDLSKVESGVMKLEAAKFRPREVVKHVLQTAAASLQKILMLEGDIADDVPIEVIGDVL 483
D+LD SK+ SG L A RE+V V++ +SLQ+ + L+ +I+ +P + GD L
Sbjct: 355 DVLDYSKLSSGSFSLHADMLDIREIVGAVVRNCRSSLQEGVELDTEISPKLPTRMRGDPL 414
Query: 484 RIRQILTNLISNAIKFTPEGKVGIKL 509
R RQ+L NL+ NA+KFT +G + +K+
Sbjct: 415 RYRQVLQNLVGNAVKFTEKGSIHVKI 440
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 82/170 (48%), Gaps = 35/170 (20%)
Query: 841 SQSPSSSSAEVPE------TKPKPKPKILLVEDNKINVMVAKSMMKQLG-HSIDVVNNGV 893
S+SPS S + VP P+ +LLVEDN +N V ++ +G ID NG
Sbjct: 537 SKSPSVSGSPVPTEVASEMRSIAPRKHVLLVEDNIVNHTVMLKLLHTIGFQRIDGAWNGA 596
Query: 894 EAVHAVQCQ--NYDLILMDVCMPVMDGLKATRLIRSFEDTGNWDAAAEAGIEQAMPSSGS 951
EAV V+ + +YD+ILMDV MPV+DGL AT IR T
Sbjct: 597 EAVRMVRQKPLSYDIILMDVSMPVLDGLAATEQIRDMGLT-------------------- 636
Query: 952 SNHFKRIPIIAMTANALSESAEECFANGMDSFVSKPVTFQKLKECLEQYF 1001
+PIIA+T NA+ AE A GMD + KPV +L L ++F
Sbjct: 637 ------MPIIAITGNAMKGDAETYIAQGMDDCICKPVHRDQLLRVLWKWF 680
>sp|P58662|RCSC_SALTY Sensor protein RcsC OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=rcsC PE=3 SV=1
Length = 948
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 143/327 (43%), Gaps = 90/327 (27%)
Query: 346 EIAVQKAKETELNKTIHITEETMRAKQM-LATMSHEIRSPLTGVVSMAEILSNTKLDREQ 404
+++ + E L + E+ ++K M LAT+SHE+R+PL G++ ++L +L +
Sbjct: 445 DVSTRVKMEESLQEMAQAAEQASQSKSMFLATVSHELRTPLYGIIGNLDLLQTKELPKGV 504
Query: 405 RQLLGVMISSGDLVLQLINDILDLSKVESGVMKLEAAKFRPREVVKHVLQTAAASLQKIL 464
+L+ M +S L+L++I+DILD SK+ES +K+E +F PRE
Sbjct: 505 ERLVTAMNNSSSLLLKIISDILDFSKIESEQLKIEPREFSPRE----------------- 547
Query: 465 MLEGDIADDVPIEVIGDVLRIRQILTNLISNAIKFTPEGKVGIKLYVVPEPPFAKEGLKQ 524
++ ++ +N + ++G+ ++ P+ P + G
Sbjct: 548 -----------------------VMNHITANYLPLVVRKQLGLYCFIEPDVPVSLNG--- 581
Query: 525 KSKAYQSATDAVKEEKHQPKSQTASDQNGFHDKKHGEGYQDHKHDDDPGTPVSHGNSMDE 584
D ++ + Q S S+ F D G V H
Sbjct: 582 ---------DPMRLQ--QVISNLLSNAIKF---------------TDIGCIVLH------ 609
Query: 585 DLEATVWIRCD-------VYDTGIGIPENALPTLFRKYMQVSADHARKYGGTGLGLAICK 637
+RCD V DTG+GIP + LF + QV R + GTGLGLAIC+
Sbjct: 610 -------VRCDGDYLSIRVRDTGVGIPAKEVVRLFDPFFQVGTGVQRNFQGTGLGLAICE 662
Query: 638 QLVELMGGRLTVTSKVHCGSTFTFILP 664
+L+ +M G ++V S+ GS FT +P
Sbjct: 663 KLISMMDGDISVDSEPGMGSQFTLRIP 689
Score = 80.1 bits (196), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 26/139 (18%)
Query: 862 ILLVEDNKINVMVAKSMMKQLGHSIDVVNNGVEAVHAVQCQNYDLILMDVCMPVMDGLKA 921
IL+V+D+ IN + + LG+ N+GV+A++ + D++L DV MP MDG +
Sbjct: 827 ILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNAIDIVLSDVNMPNMDGYRL 886
Query: 922 TRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNHFKRIPIIAMTANALSESAEECFANGMD 981
T+ IR T +P++ +TANAL+E + C +GMD
Sbjct: 887 TQRIRQLGLT--------------------------LPVVGVTANALAEEKQRCLESGMD 920
Query: 982 SFVSKPVTFQKLKECLEQY 1000
S +SKPVT LK+ L Y
Sbjct: 921 SCLSKPVTLDVLKQTLAVY 939
>sp|P58356|TORS_ECO57 Sensor protein TorS OS=Escherichia coli O157:H7 GN=torS PE=3 SV=1
Length = 914
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 107/177 (60%), Gaps = 12/177 (6%)
Query: 344 REEIAVQ-KAKETELNKTI----HITEETMRAKQ----MLATMSHEIRSPLTGVVSMAEI 394
RE++A Q KA+ EL + + E +A Q LA MSHEIR+PL G++ A++
Sbjct: 409 REQLAAQVKARTAELQELVIEHRQARAEAEKASQAKSAFLAAMSHEIRTPLYGILGTAQL 468
Query: 395 LSNTKLDREQRQLLGVMISSGDLVLQLINDILDLSKVESGVMKLEAAK--FRPREVVKHV 452
L++ QR L + SG+ +L ++NDILD S +E+G + + F PR +++
Sbjct: 469 LADNPALNAQRDDLRAITDSGESLLTILNDILDYSAIEAGGKNVSVSDEPFEPRPLLEST 528
Query: 453 LQTAAASLQ-KILMLEGDIADDVPIEVIGDVLRIRQILTNLISNAIKFTPEGKVGIK 508
LQ + ++ + + L IADDVP ++GD RIRQ++TNL+SNA++FT EG++ ++
Sbjct: 529 LQLMSGRVKGRPIRLATAIADDVPTALMGDPRRIRQVITNLLSNALRFTDEGQIVLR 585
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 591 WIRCDVYDTGIGIPENALPTLFRKYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVT 650
W+ +V D+G GI L +F+ ++QVS K GGTGLGL I +L + MGG L+ T
Sbjct: 593 WL-VEVEDSGCGIDPAKLAEIFQPFIQVSG----KRGGTGLGLTISSRLAQAMGGELSAT 647
Query: 651 SKVHCGSTFTFILPYQVS 668
S GS F LP +V+
Sbjct: 648 STPEVGSCFCLRLPLRVA 665
Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/186 (18%), Positives = 74/186 (39%), Gaps = 38/186 (20%)
Query: 822 SKTNEPQ-KICEMQEKPDRISQSPSSSSAEVPETKPKP----KPKILLVEDNKINVMVAK 876
S T+ P+ C P R++ +P VP+T + ++LL+EDN + +
Sbjct: 645 SATSTPEVGSCFCLRLPLRVATAP------VPKTVNQAVRLDGLRLLLIEDNPLTQRITV 698
Query: 877 SMMKQLGHSIDVVNNGVEAVHAVQ-CQNYDLILMDVCMPVMDGLKATRLIRSFEDTGNWD 935
M+ G + + N +A+ +Q + + L+D +P ++G+ R +
Sbjct: 699 EMLNTSGAQVVAIGNAAQALETLQNSEPFAAALVDFDLPDVNGITLARQL---------- 748
Query: 936 AAAEAGIEQAMPSSGSSNHFKRIPIIAMTANALSESAEECFANGMDSFVSKPVTFQKLKE 995
+ + + +I +A+ + E+ + ++ + KPV + L +
Sbjct: 749 ----------------ARQYPSLVLIGFSAHVIDETLRQRTSSLFRGIIPKPVPREVLGQ 792
Query: 996 CLEQYF 1001
L Y
Sbjct: 793 LLAHYL 798
>sp|Q56128|RCSC_SALTI Sensor protein RcsC OS=Salmonella typhi GN=rcsC PE=3 SV=2
Length = 948
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 143/327 (43%), Gaps = 90/327 (27%)
Query: 346 EIAVQKAKETELNKTIHITEETMRAKQM-LATMSHEIRSPLTGVVSMAEILSNTKLDREQ 404
+++ + E L + E+ ++K M LAT+SHE+R+PL G++ ++L +L +
Sbjct: 445 DVSTRVKMEESLQEMAQAAEQASQSKSMFLATVSHELRTPLYGIIGNLDLLQTKELPKGV 504
Query: 405 RQLLGVMISSGDLVLQLINDILDLSKVESGVMKLEAAKFRPREVVKHVLQTAAASLQKIL 464
+L+ M +S L+L++I+DILD SK+ES +K+E +F PRE
Sbjct: 505 DRLVTAMNNSSSLLLKIISDILDFSKIESEQLKIEPREFSPRE----------------- 547
Query: 465 MLEGDIADDVPIEVIGDVLRIRQILTNLISNAIKFTPEGKVGIKLYVVPEPPFAKEGLKQ 524
++ ++ +N + ++G+ ++ P+ P + G
Sbjct: 548 -----------------------VMNHITANYLPLVVRKQLGLYCFIEPDVPVSLNG--- 581
Query: 525 KSKAYQSATDAVKEEKHQPKSQTASDQNGFHDKKHGEGYQDHKHDDDPGTPVSHGNSMDE 584
D ++ + Q S S+ F D G V H
Sbjct: 582 ---------DPMRLQ--QVISNLLSNAIKF---------------TDIGCIVLH------ 609
Query: 585 DLEATVWIRCD-------VYDTGIGIPENALPTLFRKYMQVSADHARKYGGTGLGLAICK 637
+RCD V DTG+GIP + LF + QV R + GTGLGLAIC+
Sbjct: 610 -------VRCDGDYLSIRVRDTGVGIPAKEVVRLFDPFFQVGTGVQRNFQGTGLGLAICE 662
Query: 638 QLVELMGGRLTVTSKVHCGSTFTFILP 664
+L+ +M G ++V S+ GS FT +P
Sbjct: 663 KLISMMDGDISVDSEPGMGSQFTLRIP 689
Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 26/139 (18%)
Query: 862 ILLVEDNKINVMVAKSMMKQLGHSIDVVNNGVEAVHAVQCQNYDLILMDVCMPVMDGLKA 921
IL+V+D+ IN + + LG+ N+GV+A++ + D++L DV MP MDG +
Sbjct: 827 ILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNAIDIVLSDVNMPNMDGYRL 886
Query: 922 TRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNHFKRIPIIAMTANALSESAEECFANGMD 981
T+ IR T +P++ +TANAL+E + C +GMD
Sbjct: 887 TQRIRQLGLT--------------------------LPVVGVTANALAEEKQRCLESGMD 920
Query: 982 SFVSKPVTFQKLKECLEQY 1000
S +SKPVT LK+ L Y
Sbjct: 921 SCLSKPVTLDALKQTLAVY 939
>sp|Q551X9|DHKF_DICDI Hybrid signal transduction histidine kinase F OS=Dictyostelium
discoideum GN=dhkF PE=3 SV=1
Length = 1109
Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 123/208 (59%), Gaps = 3/208 (1%)
Query: 308 IYVEPVFSKSGETIGVNYMGMDVTDQVRKREKMAKLREEIAVQKAKETELNKTIHITEET 367
++V+ + +IG+ + D+TDQ+R +E +L+++ +++ + EL + +
Sbjct: 255 VFVKEISDIHSNSIGIMIIVRDITDQIRLKEMNIELQKKSELEQKRNQELMEARDLALTA 314
Query: 368 MRAK-QMLATMSHEIRSPLTGVVSMAE-ILSNTKLDREQRQLLGVMISSGDLVLQLINDI 425
+ K Q LAT+SHEIR+PL G+++M E +LS + L+ EQ + + S +L+L + +DI
Sbjct: 315 TKIKSQFLATISHEIRTPLNGIITMGEMLLSTSPLNTEQHDIAETIFGSSELLLSITSDI 374
Query: 426 LDLSKVESGVMKLEAAKFRPREVVKHVLQTAAASL-QKILMLEGDIADDVPIEVIGDVLR 484
LD SK+E+ ++LE +F ++ + +T S+ K + + + D+P +IGD R
Sbjct: 375 LDFSKIEASKLELEMIEFDFIGCLEGIGKTIGVSITNKPIEIAFLMDTDIPHRLIGDPNR 434
Query: 485 IRQILTNLISNAIKFTPEGKVGIKLYVV 512
+ QI+ N+ +NA+K+T G + ++ V+
Sbjct: 435 LIQIMLNMGTNAVKYTDRGHIVFRISVI 462
Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 77/145 (53%), Gaps = 20/145 (13%)
Query: 857 KPKPKILLVEDNKINVMVAKSMMKQLGHSIDVVNNGVEAVHAVQCQNYDLILMDVCMPVM 916
+ +P+ILLV+DN +N V K +K+LG+ D NG E + NY+LI MD+ MP+
Sbjct: 924 RTRPRILLVDDNAVNRKVVKLQLKKLGYDCDTATNGFEGFEMQKKDNYELIFMDLNMPLC 983
Query: 917 DGLKATRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNHFKRIPIIAMTANALSESAEECF 976
DG A++LIRS E+ N+ + A I+ ++A L S + C
Sbjct: 984 DGSMASKLIRSHEELNNYKSRAN--------------------IVGLSATYLHGSKDYCV 1023
Query: 977 ANGMDSFVSKPVTFQKLKECLEQYF 1001
+ GMD FV KP+ Q L E +++Y
Sbjct: 1024 SMGMDDFVVKPLKLQPLGELVKKYL 1048
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 592 IRCDVYDTGIGIPENALPTLFRKYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTV-T 650
I+ + D+GIGI E+ LF + Q+ + RKYGG+GLGLAI +L +LMGG + +
Sbjct: 471 IKISIDDSGIGIGEDQRAHLFEPFHQIDSSSTRKYGGSGLGLAISSKLAKLMGGEVILER 530
Query: 651 SKVHCGSTFTFILPYQ 666
SK GS F+ L ++
Sbjct: 531 SKPGVGSLFSVTLNFE 546
>sp|P39453|TORS_ECOLI Sensor protein TorS OS=Escherichia coli (strain K12) GN=torS PE=1
SV=4
Length = 914
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 106/177 (59%), Gaps = 12/177 (6%)
Query: 344 REEIAVQ-KAKETELNKTI----HITEETMRAKQ----MLATMSHEIRSPLTGVVSMAEI 394
RE++A Q KA+ EL + + E +A Q LA MSHEIR+PL G++ A++
Sbjct: 409 REQLAAQVKARTAELQELVIEHRQARAEAEKASQAKSAFLAAMSHEIRTPLYGILGTAQL 468
Query: 395 LSNTKLDREQRQLLGVMISSGDLVLQLINDILDLSKVESGVMKLEAAK--FRPREVVKHV 452
L++ QR L + SG+ +L ++NDILD S +E+G + + F PR +++
Sbjct: 469 LADNPALNAQRDDLRAITDSGESLLTILNDILDYSAIEAGGKNVSVSDEPFEPRPLLEST 528
Query: 453 LQTAAASLQ-KILMLEGDIADDVPIEVIGDVLRIRQILTNLISNAIKFTPEGKVGIK 508
LQ + ++ + + L IADD+P ++GD RIRQ++TNL+SNA++FT EG + ++
Sbjct: 529 LQLMSGRVKGRPIRLATAIADDMPCALMGDPRRIRQVITNLLSNALRFTDEGYIILR 585
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 591 WIRCDVYDTGIGIPENALPTLFRKYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVT 650
W+ +V D+G GI L +F+ ++QVS K GGTGLGL I +L + MGG L+ T
Sbjct: 593 WL-VEVEDSGCGIDPAKLAEIFQPFVQVSG----KRGGTGLGLTISSRLAQAMGGELSAT 647
Query: 651 SKVHCGSTFTFILPYQVS 668
S GS F LP +V+
Sbjct: 648 STPEVGSCFCLRLPLRVA 665
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 76/186 (40%), Gaps = 38/186 (20%)
Query: 822 SKTNEPQ-KICEMQEKPDRISQSPSSSSAEVPETKPKP----KPKILLVEDNKINVMVAK 876
S T+ P+ C P R++ +P VP+T + ++LL+EDN + +
Sbjct: 645 SATSTPEVGSCFCLRLPLRVATAP------VPKTVNQAVRLDGLRLLLIEDNPLTQRITI 698
Query: 877 SMMKQLGHSIDVVNNGVEAVHAVQ-CQNYDLILMDVCMPVMDGLKATRLIRSFEDTGNWD 935
M+K G I V N +A+ +Q + + L+D +P +DG+ R
Sbjct: 699 EMLKTSGAQIVAVGNAAQALETLQNSEPFAAALVDFDLPDIDGITLAR------------ 746
Query: 936 AAAEAGIEQAMPSSGSSNHFKRIPIIAMTANALSESAEECFANGMDSFVSKPVTFQKLKE 995
+ Q PS + +I +A+ + E+ + ++ + KPV + L +
Sbjct: 747 -----QLAQQYPS---------LVLIGFSAHVIDETLRQRTSSLFRGIIPKPVPREVLGQ 792
Query: 996 CLEQYF 1001
L Y
Sbjct: 793 LLAHYL 798
>sp|P48027|GACS_PSESY Sensor protein GacS OS=Pseudomonas syringae pv. syringae GN=gacS
PE=3 SV=1
Length = 907
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 106/191 (55%), Gaps = 7/191 (3%)
Query: 322 GVNYMGMDVTD-----QVRKREKMAKLREEIAVQKAKETELNKTIHITEETMRAK-QMLA 375
G+N M + + Q+ + +R+ + + + EL+ E R K + LA
Sbjct: 221 GINRMAATLQNAQEELQLSIDQATEDVRQNLETIEIQNIELDLARKEALEASRIKSEFLA 280
Query: 376 TMSHEIRSPLTGVVSMAEILSNTKLDREQRQLLGVMISSGDLVLQLINDILDLSKVESGV 435
MSHEIR+PL G++ +L ++L Q LG + S D +L +IN+ILD SK+E+G
Sbjct: 281 NMSHEIRTPLNGILGFTHLLQKSELTPRQFDYLGTIEKSADNLLSIINEILDFSKIEAGK 340
Query: 436 MKLEAAKFRPREVVKHVLQTAA-ASLQKILMLEGDIADDVPIEVIGDVLRIRQILTNLIS 494
+ L+ F R++++ L A A+ K L L + D P+ + GD LR+RQILTNL+S
Sbjct: 341 LVLDNIPFNLRDLLQDTLTILAPAAHAKQLELVSLVYRDTPLALSGDPLRLRQILTNLVS 400
Query: 495 NAIKFTPEGKV 505
NAIKFT EG +
Sbjct: 401 NAIKFTREGTI 411
Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 88/158 (55%), Gaps = 21/158 (13%)
Query: 843 SPSSSSAEVPETKPKPKPKILLVEDNKINVMVAKSMMKQLGHSIDVVNNGVEAVHAVQCQ 902
+P + A++ P++L V+DN N+++ +++++ +G + V G AV+AVQ +
Sbjct: 640 APRAVRADIGPPLSSRAPRVLCVDDNPANLLLVQTLLEDMGAEVVAVEGGYAAVNAVQQE 699
Query: 903 NYDLILMDVCMPVMDGLKATRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNHFKRIPIIA 962
+DL+LMDV MP MDG +AT IR++E N + +PI+A
Sbjct: 700 AFDLVLMDVQMPGMDGRQATEAIRAWEAERNQSS---------------------LPIVA 738
Query: 963 MTANALSESAEECFANGMDSFVSKPVTFQKLKECLEQY 1000
+TA+A++ +GMD +++KP++ ++L + + ++
Sbjct: 739 LTAHAMANEKRSLLQSGMDDYLTKPISERQLAQVVLKW 776
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 573 GTPVSHGNSMDEDLEATVWIRCDVYDTGIGIPENALPTLFRKYMQVSADHARKYGGTGLG 632
GT V+ DE E +R V DTGIG+ + LF+ + Q +R+ GGTGLG
Sbjct: 409 GTIVARAMLEDET-EEHAQLRISVQDTGIGLSSQDVRALFQAFSQADNSLSRQPGGTGLG 467
Query: 633 LAICKQLVELMGGRLTVTSKVHCGSTF 659
L I K+L+E MGG + V S GS F
Sbjct: 468 LVISKRLIEQMGGEIGVDSTPGEGSEF 494
>sp|Q9P7Q7|MAK1_SCHPO Peroxide stress-activated histidine kinase mak1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=mak1 PE=3 SV=1
Length = 1639
Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 88/149 (59%), Gaps = 2/149 (1%)
Query: 365 EETMRAK-QMLATMSHEIRSPLTGVVSMAEILSNTKLDREQRQLLGVMISSGDLVLQLIN 423
+ +R+K Q L+ MSHEIR+PL G+ M L T++ EQ ++ S +L +IN
Sbjct: 988 QRIVRSKMQYLSNMSHEIRTPLIGITGMVSFLLETQMSAEQLSYARIIQQSAKSLLTVIN 1047
Query: 424 DILDLSKVESGVMKLEAAKFRPREVVKHVLQT-AAASLQKILMLEGDIADDVPIEVIGDV 482
DILDLSKV +G+MKL + +F R +++ +T + K + L + DVP V GD
Sbjct: 1048 DILDLSKVRAGMMKLTSQRFSVRAMMEDANETLGTLAFSKGIELNYTVDIDVPDIVFGDN 1107
Query: 483 LRIRQILTNLISNAIKFTPEGKVGIKLYV 511
+R+RQ+ N+I NAIKFT G+V + V
Sbjct: 1108 MRMRQVALNVIGNAIKFTNVGEVFTRCSV 1136
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 72/135 (53%), Gaps = 24/135 (17%)
Query: 862 ILLVEDNKINVMVAKSMMKQLGHSIDVVNNGVEAVHAVQCQN---YDLILMDVCMPVMDG 918
+LL EDN IN+ V ++++G V +G++ V + + Y LILMD+ MPVMDG
Sbjct: 1508 VLLAEDNIINIKVISRYLERIGVKFKVTMDGLQCVEEWKREKPNFYSLILMDLQMPVMDG 1567
Query: 919 LKATRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNHFKRIPIIAMTANALSESAEECFAN 978
+A IR +E +E N + ++PI+A++ANAL C +
Sbjct: 1568 YQACNEIRKYE------------LE---------NDYPKVPIVALSANALPHVVLSCKDS 1606
Query: 979 GMDSFVSKPVTFQKL 993
G DS+++KP+T Q L
Sbjct: 1607 GFDSYLAKPITLQHL 1621
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%)
Query: 589 TVWIRCDVYDTGIGIPENALPTLFRKYMQVSADHARKYGGTGLGLAICKQLVELMGGRLT 648
TV ++ + DTG G + +F+ + QV + ++GG+GLGL I K+LVEL G ++
Sbjct: 1145 TVVLKWECIDTGQGFNRDDQLQMFKPFSQVESSTLPRHGGSGLGLVISKELVELHNGSMS 1204
Query: 649 VTSKVHCGSTFTFILPYQVSPIEENSDDPD 678
S+ G+ F + + + + PD
Sbjct: 1205 CQSRRGVGTRFMWTATFTMDKTPLKFEPPD 1234
>sp|Q9KLK7|LUXQ_VIBCH Autoinducer 2 sensor kinase/phosphatase LuxQ OS=Vibrio cholerae
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
GN=luxQ PE=1 SV=1
Length = 857
Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 101/162 (62%), Gaps = 12/162 (7%)
Query: 365 EETMRAK-QMLATMSHEIRSPLTGVVSMAEILSNTKLDREQRQLLGVMISSGDLVLQLIN 423
EE+ R + + LA MSHE+R+PL GV+ ++++L T L+ EQR+ + V+ SSG+ +L ++N
Sbjct: 474 EESARVRAEFLAKMSHELRTPLNGVLGVSQLLKRTPLNDEQREHVAVLCSSGEHLLAVLN 533
Query: 424 DILDLSKVESGVMKLEAAKFRPREVVKHVLQTAAASLQKILM----LEGDIADDVPIEVI 479
DILD S++E G +++ +FR +E+V A + + L LE + ++ I
Sbjct: 534 DILDFSRLEQGKFRIQKNEFRLKELV-----CAIDRIYRPLCNEKGLELVVNSNITTAAI 588
Query: 480 --GDVLRIRQILTNLISNAIKFTPEGKVGIKLYVVPEPPFAK 519
D +RI QIL NL++NAIKFT +G + ++L ++ P A+
Sbjct: 589 VRSDQIRINQILFNLLNNAIKFTHQGSIRVELQLIEGDPLAQ 630
Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 36/179 (20%)
Query: 826 EPQKICEMQEKPDRISQSPSSSSAEVPETKPKP----KPKILLVEDNKINVMVAKSMMKQ 881
E Q E+ EKPD Q +P P+P ++LLVEDN N +A++ ++
Sbjct: 699 EIQLPIELVEKPDAPQQL-------LPAPDPQPLFDKTLRVLLVEDNHTNAFIAQAFCRK 751
Query: 882 LGHSIDVVNNGVEAVHAVQCQNYDLILMDVCMPVMDGLKATRLIRSFEDTGNWDAAAEAG 941
G + V +G++A+ ++ +YDL+LMD +P +DG++ TR I+
Sbjct: 752 YGLDVSWVTDGLQAIEELKIHDYDLVLMDNQLPYLDGVETTRTIKKVLH----------- 800
Query: 942 IEQAMPSSGSSNHFKRIPIIAMTANALSESAEECFANGMDSFVSKPVTFQKLKECLEQY 1000
+P + + A TA+ L E+ + F G + + KP+ Q L + LE +
Sbjct: 801 ----LP----------VVVYACTADGLEETRQAFFHAGAEYVLVKPLKEQTLHKALEHF 845
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 596 VYDTGIGIPENALPTLFRKYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVTSKVHC 655
V DTGIGI E L +F +MQ + R+YGG+GLGL I LVE++ G+L V+S+
Sbjct: 635 VVDTGIGIREQDLTVIFEPFMQAESTTTREYGGSGLGLTIVHSLVEMLSGQLHVSSEYGI 694
Query: 656 GSTFTFILPYQVSPIEENSDDPDDL 680
G+ F LP ++ E D P L
Sbjct: 695 GTRFEIQLPIELV---EKPDAPQQL 716
>sp|Q54RP6|DHKL_DICDI Hybrid signal transduction histidine kinase L OS=Dictyostelium
discoideum GN=dhkL PE=3 SV=1
Length = 1709
Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 114/206 (55%), Gaps = 24/206 (11%)
Query: 307 LIYVE----PVFSKSGETIGVNYMGMDVTDQVRKREKMAKLREEIAVQKAKETELNKTIH 362
LIY E PV + + + N DVT + ++ EE +K E NK I
Sbjct: 783 LIYFEASISPVLDQFQQILYYNCTKRDVTQK--------RIDEE-----SKTLEQNKIIE 829
Query: 363 ITEETMRAKQMLATMSHEIRSPLTGVVSMAEILSNTKLDREQRQLLGVMISSGDLVLQLI 422
+++ L+ MSH+IR+P++ ++ MA++L +T L + Q L ++ +S + +L +I
Sbjct: 830 ------KSRLRLSMMSHDIRTPMSNIIGMADLLLDTSLSQHQHHYLEIIKNSSNTLLTII 883
Query: 423 NDILDLSKVESGVMKLEAAKFRPREVVKHVLQTAAASLQ-KILMLEGDIADDVPIEVIGD 481
NDILD+SK+E+G + ++ F V V+++ A +Q K L L + +P +IG
Sbjct: 884 NDILDISKIEAGKLDIDYESFDFNATVSQVVESMAQRVQSKGLELLSYVDPKIPNILIGP 943
Query: 482 VLRIRQILTNLISNAIKFTPEGKVGI 507
R+ QILTNL+ N++KFT +G++ I
Sbjct: 944 SSRLNQILTNLLGNSLKFTDKGEISI 969
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 84/158 (53%), Gaps = 25/158 (15%)
Query: 847 SSAEVPETKP-KPKPKILLVEDNKINVMVAKSMMKQLGHSIDVVNNGVEAVHAVQ---CQ 902
+SAE E P K K+L+V+DN IN+ + M++ +G +D V +G +A+ +
Sbjct: 1555 ASAEEQEQDPSKLLGKVLVVDDNHINIQILSKMLQTVGCEVDSVLSGADALAKINQSSGD 1614
Query: 903 NYDLILMDVCMPVMDGLKATRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNHFKRIPIIA 962
+YD I +D+ MP MDG + +R IR E + ++P R+ IIA
Sbjct: 1615 SYDAIFLDIQMPDMDGFQVSRKIREREK------------KFSLP---------RVAIIA 1653
Query: 963 MTANALSESAEECFANGMDSFVSKPVTFQKLKECLEQY 1000
TAN E +CF GMD F+SKP+ ++KE +++Y
Sbjct: 1654 TTANVFKEDQLKCFDAGMDDFISKPIKRAEIKEIIKKY 1691
Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 582 MDEDLEATVWIRCDVYDTGIGIPENALPTLFRKYMQVSADHARKYGGTGLGLAICKQLVE 641
++++ ++ I+ DV DTGIGI + ALP LF+ + Q R+YGG+GLGLAICK+LV
Sbjct: 973 LNDETDSEYEIKVDVRDTGIGIKKEALPLLFKAFTQAEGTITRQYGGSGLGLAICKELVH 1032
Query: 642 L-MGGRLTVTSKVHCGSTFTFILPYQ 666
L G ++V S+ GSTFT IL ++
Sbjct: 1033 LAFNGEISVESQYGHGSTFTCILKFK 1058
>sp|P0C0F7|RPFC_XANC8 Sensory/regulatory protein RpfC OS=Xanthomonas campestris pv.
campestris (strain 8004) GN=rpfC PE=3 SV=2
Length = 726
Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 95/170 (55%), Gaps = 9/170 (5%)
Query: 347 IAVQKAKETELNKTIHITEETMRAKQ----MLATMSHEIRSPLTGVVSMAEILSNTKLDR 402
IAV ++ L E A Q LA MSHE R+PL G+ M E+L+ T+LD
Sbjct: 162 IAVPLYFDSLLRAMTRAVREARHANQAKSRFLANMSHEFRTPLNGLSGMTEVLATTRLDA 221
Query: 403 EQRQLLGVMISSGDLVLQLINDILDLSKVESGVMKLEAAKFRPREVVKHV---LQTAAAS 459
EQ++ L + +S +L L+ ++LD+S +E+G ++++ F RE++ V LQ A
Sbjct: 222 EQKECLNTIQASARSLLSLVEEVLDISAIEAGKIRIDRRDFSLREMIGSVNLILQPQARG 281
Query: 460 LQKILMLEGDIADDVPIEVIGDVLRIRQILTNLISNAIKFTPEGKVGIKL 509
+ L +ADDVP + GD +RQ+L NL+ NA+KFT G V +++
Sbjct: 282 --RRLEYGTQVADDVPDLLKGDTAHLRQVLLNLVGNAVKFTEHGHVLLRV 329
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 587 EATVWIRCDVYDTGIGIPENALPTLFRKYMQVSADHARKYGGTGLGLAICKQLVELMGGR 646
E V +R DV DTGIG+P + P LF + Q +R+Y GTGLG I K LVE MGG
Sbjct: 337 EDAVRLRFDVEDTGIGVPMDMRPRLFEAFEQADVGLSRRYEGTGLGTTIAKGLVEAMGGS 396
Query: 647 LTVTSKVHCGSTFTFILPYQVS-PIEENS 674
+ GS F F LP + P++ ++
Sbjct: 397 IGFKENQPSGSVFWFELPMAIGEPLKSST 425
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 69/137 (50%), Gaps = 22/137 (16%)
Query: 861 KILLVEDNKINVMVAKSMMKQLGHSIDVVNNGVEAVHAVQCQNYDLILMDVCMPVMDGLK 920
++L+ +D++ N MV + ++++ GH + VN + + A+ ++YD +++D+ MP M+GL
Sbjct: 463 RMLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAMAEEDYDAVIVDLHMPGMNGLD 522
Query: 921 ATRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNHFKRIPIIAMTANALSESAEECFANGM 980
+ +R + +G + P++ ++A+ E+ C G
Sbjct: 523 MLKQLRVMQASG----------------------MRYTPVVVLSADVTPEAIRACEQAGA 560
Query: 981 DSFVSKPVTFQKLKECL 997
+F++KPV KL + L
Sbjct: 561 RAFLAKPVLAAKLLDTL 577
>sp|Q54SP4|DHKD_DICDI Hybrid signal transduction histidine kinase D OS=Dictyostelium
discoideum GN=dhkD PE=2 SV=1
Length = 1546
Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 174/410 (42%), Gaps = 105/410 (25%)
Query: 271 AGVKESQDFKREVLEKGLPAKRE-ITFETELFGSK------TFLIYVEPVFSKSGETIGV 323
A +E+ D RE + K +K E I +ETE+FG T + P+F+ GE +
Sbjct: 117 ATSQENIDNVREAVHKA--SKGEFIRYETEIFGKSAGTEKITIDFSLMPLFNDKGEVSLI 174
Query: 324 NYMGMDVTDQV-------RKREKMAKLREEIAVQKAKETELNKTIHITEETMRAKQMLAT 376
G ++T++ RK ++ L E+I KE + KT Q A
Sbjct: 175 LPEGRNITEKRLGELEIERKNNELRSLYEKI-----KELDELKT-----------QFFAN 218
Query: 377 MSHEIRSPLTGVVSMAE-ILSNTKLDREQRQLLGVMISSGDLVLQLINDILDLSKVESGV 435
+SHE+R+PL +V + +L + +D R+ L ++ + +L+++N++LD+S++E+G
Sbjct: 219 VSHELRTPLALIVGPTDKLLKDENVDINVRKDLEIVARNARGLLKIVNNLLDISRLEAGK 278
Query: 436 MKLEAAKFRPREVVKHVLQTAAASLQKILMLEGDI-ADDVPIEVIGDVLRIRQILTNLIS 494
M L + + V H++ + L + L+ I P+ D ++++++TNLIS
Sbjct: 279 MNLNYSMVNLGQTV-HLIASCFEILAREKSLDFSIITPSEPMMAAIDADKMQRVITNLIS 337
Query: 495 NAIKFTPEGKVGIKLYVVPEPPFAKEGLKQKSKAYQSATDAVKEEKHQPKSQTASDQNGF 554
NA KFTP G A + E+ F
Sbjct: 338 NAFKFTPSG---------------------------GAVKCILEK--------------F 356
Query: 555 HDKKHGEGYQDHKHDDDPGTPVSHGNSMDEDLEATVWIRCDVYDTGIGIPENALPTLFRK 614
+ G+Q D PG P +N +F +
Sbjct: 357 DLSPNKPGFQIVVSDTGPGIP-----------------------------DNLHEIIFER 387
Query: 615 YMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVTSKVHCGSTFTFILP 664
+ QV RK+GGTGLGL+I K+ V L GG +T+ + G+ FT LP
Sbjct: 388 FRQVDGSSTRKHGGTGLGLSIVKEFVTLHGGTVTIHNISTGGAQFTLRLP 437
Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 141/334 (42%), Gaps = 77/334 (23%)
Query: 356 ELNKTIHITEETMRAK-QMLATMSHEIRSPLTGVVSMAEIL---------------SNTK 399
EL K ++ T ++K + +SHE+R+PL G++ ++L S +
Sbjct: 726 ELEKERNLLNNTNKSKDEFFMNLSHELRTPLNGILGWCQLLLYDIDSGGSSGGGSGSISG 785
Query: 400 LDREQRQLLGVMISSGDLVLQLINDILDLSKVESGVMKLEAAK----FRPREVVKHVLQT 455
D R L + QLIND+LD+S + L + +L T
Sbjct: 786 DDSTVRTGLETIERCASSQNQLINDLLDMSLIIGDKFSLILGDVDLPILIENAISSILVT 845
Query: 456 AAA---SLQKILMLEGDIADDVPIEVIGDVLRIRQILTNLISNAIKFTPE-GKVGIKLYV 511
A + S+ + EG+ + ++GD R++Q++ NL+SN+IKFT E G++ + L V
Sbjct: 846 AQSKKISVHSNIQGEGEEESSILRNIVGDKARLQQVIWNLLSNSIKFTKEKGRIHLNLKV 905
Query: 512 VPEPPFAKEGLKQKSKAYQSATDAVKEEKHQPKSQTASDQNGFHDKKHGEGYQDHKHDDD 571
V + P ++E L S P T + +HG+ +
Sbjct: 906 VNQIP-SREVLGFCS---------------NPMFNTIN--------RHGDRW-------- 933
Query: 572 PGTPVSHGNSMDEDLEATVWIRCDVYDTGIGIPENALPTLFRKYMQVSADHARKYGGTGL 631
I + D G GIP+ LP++F ++ Q R YGG G+
Sbjct: 934 --------------------ILFTITDNGKGIPKQFLPSVFDRFKQADCSSTRSYGGLGI 973
Query: 632 GLAICKQLVELMGGRLTVTSKV-HCGSTFTFILP 664
GL+I + ++ L G + S+ + GS FT +LP
Sbjct: 974 GLSITQNIIHLHKGAVYANSEGENKGSQFTVVLP 1007
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 61/142 (42%), Gaps = 26/142 (18%)
Query: 861 KILLVEDNKINVMVAKSMMKQLG-HSIDVVNNGVEAVHAVQCQNY----DLILMDVCMPV 915
+I+LV+D + + SM+ +LG ID V +A C + D+IL D+ MP
Sbjct: 1359 QIMLVDDLEETTHLFSSMLYKLGAKRIDTFQR-VSDAYAFLCDSSKPQPDIILSDLTMPF 1417
Query: 916 MDGLKATRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNHFKRIPIIAMTANALSESAEEC 975
DG R +R E + K+ PIIA+TA+ S E+
Sbjct: 1418 EDGYSMVRKLRDREKINTQN--------------------KKTPIIALTASVSSSDKEKV 1457
Query: 976 FANGMDSFVSKPVTFQKLKECL 997
+G D SKPV F +L +
Sbjct: 1458 LKSGFDLHCSKPVNFLELSNSI 1479
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 27/136 (19%)
Query: 859 KPKILLVEDN-KINVMVAKSMMKQLGHSIDVVNNGVEAVHAVQCQNYDLILMDVCMPVMD 917
KP +L+VEDN ++N +A+ + K + + +GVE + + DLI+ D MP M
Sbjct: 569 KPIVLVVEDNPEMNRFIAELLSKY--YFVVTAFDGVEGIEKTRAITPDLIVTDCMMPRMS 626
Query: 918 GLKATRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNHFKRIPIIAMTANALSESAEECFA 977
G + +RS E F IPI+ +TA A +
Sbjct: 627 GDEMVEQLRSDE------------------------QFDNIPILLLTAKADENLRIKLLQ 662
Query: 978 NGMDSFVSKPVTFQKL 993
NG+ +V+KP + ++L
Sbjct: 663 NGVSDYVNKPFSSEEL 678
>sp|P0C0F6|RPFC_XANCP Sensory/regulatory protein RpfC OS=Xanthomonas campestris pv.
campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)
GN=rpfC PE=1 SV=2
Length = 726
Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 95/170 (55%), Gaps = 9/170 (5%)
Query: 347 IAVQKAKETELNKTIHITEETMRAKQ----MLATMSHEIRSPLTGVVSMAEILSNTKLDR 402
IAV ++ L E A Q LA MSHE R+PL G+ M E+L+ T+LD
Sbjct: 162 IAVPLYFDSLLRAMTRAVREARHANQAKSRFLANMSHEFRTPLNGLSGMTEVLATTRLDA 221
Query: 403 EQRQLLGVMISSGDLVLQLINDILDLSKVESGVMKLEAAKFRPREVVKHV---LQTAAAS 459
EQ++ L + +S +L L+ ++LD+S +E+G ++++ F RE++ V LQ A
Sbjct: 222 EQKECLNTIQASARSLLSLVEEVLDISAIEAGKIRIDRRDFSLREMIGSVNLILQPQARG 281
Query: 460 LQKILMLEGDIADDVPIEVIGDVLRIRQILTNLISNAIKFTPEGKVGIKL 509
+ L +ADDVP + GD +RQ+L NL+ NA+KFT G V +++
Sbjct: 282 --RRLEYGTQVADDVPDLLKGDTAHLRQVLLNLVGNAVKFTEHGHVLLRV 329
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 587 EATVWIRCDVYDTGIGIPENALPTLFRKYMQVSADHARKYGGTGLGLAICKQLVELMGGR 646
E V +R DV DTGIG+P + P LF + Q +R+Y GTGLG I K LVE MGG
Sbjct: 337 EDAVRLRFDVEDTGIGVPMDMRPRLFEAFEQADVGLSRRYEGTGLGTTIAKGLVEAMGGS 396
Query: 647 LTVTSKVHCGSTFTFILPYQVS-PIEENS 674
+ GS F F LP + P++ ++
Sbjct: 397 IGFKENQPSGSVFWFELPMAIGEPLKSST 425
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 69/137 (50%), Gaps = 22/137 (16%)
Query: 861 KILLVEDNKINVMVAKSMMKQLGHSIDVVNNGVEAVHAVQCQNYDLILMDVCMPVMDGLK 920
++L+ +D++ N MV + ++++ GH + VN + + A+ ++YD +++D+ MP M+GL
Sbjct: 463 RMLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAMAEEDYDAVIVDLHMPGMNGLD 522
Query: 921 ATRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNHFKRIPIIAMTANALSESAEECFANGM 980
+ +R + +G + P++ ++A+ E+ C G
Sbjct: 523 MLKQLRVMQASG----------------------MRYTPVVVLSADVTPEAIRACEQAGA 560
Query: 981 DSFVSKPVTFQKLKECL 997
+F++KPV KL + L
Sbjct: 561 RAFLAKPVVAAKLLDTL 577
>sp|Q38846|ERS1_ARATH Ethylene response sensor 1 OS=Arabidopsis thaliana GN=ERS1 PE=1
SV=1
Length = 613
Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 165/362 (45%), Gaps = 89/362 (24%)
Query: 331 TDQVRKR-----EKMAKLREEIAVQKAKETELNKTIHITEETM-------RAKQ------ 372
TD RK E + + +++AV + L +++H ++ M +A+Q
Sbjct: 282 TDGARKWRDHELELVENVADQVAVALSHAAILEESMHARDQLMEQNFALDKARQEAEMAV 341
Query: 373 -----MLATMSHEIRSPLTGVVSMAEILSNTKLDREQRQLLGVMISSGDLVLQLINDILD 427
LA M+HE+R+P+ ++S++ +L T+L EQR ++ ++ S +LV LI+D+LD
Sbjct: 342 HARNDFLAVMNHEMRTPMHAIISLSSLLLETELSPEQRVMIETILKSSNLVATLISDVLD 401
Query: 428 LSKVESGVMKLEAAKFRPREVVKHVLQTA--AASLQKI---LMLEGDIADDVPIEVIGDV 482
LS++E G + LE F + + + V+ AS++K+ L+L D+ P IGD
Sbjct: 402 LSRLEDGSLLLENEPFSLQAIFEEVISLIKPIASVKKLSTNLILSADL----PTYAIGDE 457
Query: 483 LRIRQILTNLISNAIKFTPEGKVGIKLYVVPEPPFAKEGLKQKSKAYQSATDAVKEEKHQ 542
R+ Q + N++ NA+K F KEG Y S ++ +
Sbjct: 458 KRLMQTILNIMGNAVK------------------FTKEG-------YISIIASIM----K 488
Query: 543 PKSQTASDQNGFHDKKHGEGYQDHKHDDDPGTPVSHGNSMDEDLEATVWIRCDVYDTGIG 602
P+S F P SH ++ V DTG G
Sbjct: 489 PESLQELPSPEFF----------------PVLSDSH-----------FYLCVQVKDTGCG 521
Query: 603 IPENALPTLFRKYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVTSK-VHCGSTFTF 661
I +P LF K++Q R + G GLGLA+CK+ V LMGG + + S+ + G T +F
Sbjct: 522 IHTQDIPLLFTKFVQPRTGTQRNHSGGGLGLALCKRFVGLMGGYMWIESEGLEKGCTASF 581
Query: 662 IL 663
I+
Sbjct: 582 II 583
>sp|O22267|CKI1_ARATH Histidine kinase CKI1 OS=Arabidopsis thaliana GN=CKI1 PE=1 SV=1
Length = 1122
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 158/334 (47%), Gaps = 46/334 (13%)
Query: 340 MAKLREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLTGVVSMAEILSN-- 397
M R E+ ++ ++ T ++M Q A SH+IR L G+ + +I +
Sbjct: 366 MQATRREMHMRATLINQMEATQQAERKSMNKSQAFANASHDIRGALAGMKGLIDICRDGV 425
Query: 398 ---TKLDREQRQLLGVMISSGDLVLQLINDILDLSKVESGVMKLEAAKFRPREVVKHVLQ 454
+ +D Q V + + DLV L+N +LD+SK+ESG M+L F ++++ V+
Sbjct: 426 KPGSDVDTTLNQ---VNVCAKDLV-ALLNSVLDMSKIESGKMQLVEEDFNLSKLLEDVID 481
Query: 455 TA-AASLQKILMLEGDIADDVPIE---VIGDVLRIRQILTNLISNAIKFTPEGKVGIKLY 510
+++K + + D D + V GD R++QIL NL+SNA+KFT +G + ++ +
Sbjct: 482 FYHPVAMKKGVDVVLDPHDGSVFKFSNVRGDSGRLKQILNNLVSNAVKFTVDGHIAVRAW 541
Query: 511 VVPEPPFAKEGLKQKSKAYQSATDAVKEEKHQPKSQTASDQNGF-HDKKHGEGYQDHKHD 569
Q+ + S A PK + ++ F +K+ Y+ +
Sbjct: 542 A------------QRPGSNSSVVLA-----SYPKGVSKFVKSMFCKNKEESSTYETEISN 584
Query: 570 DDPGTPVSHGNSMDEDLEATVWIRCDVYDTGIGIPENALPTLFRKYMQVSADHARKYGGT 629
+ ++ N+M+ E V DTG GIP ++F Y+QV + A+ + GT
Sbjct: 585 ----SIRNNANTMEFVFE--------VDDTGKGIPMEMRKSVFENYVQVR-ETAQGHQGT 631
Query: 630 GLGLAICKQLVELMGGRLTVTSKVHC--GSTFTF 661
GLGL I + LV LMGG + +T K G+ F F
Sbjct: 632 GLGLGIVQSLVRLMGGEIRITDKAMGEKGTCFQF 665
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 37/143 (25%)
Query: 861 KILLVEDNKINVMVAKSMMKQLGHS-IDVVNNGVEAVH-------------AVQCQNYDL 906
++L+V+DN I+ VA +K++G S ++ ++G EA+ +V +D
Sbjct: 987 RVLVVDDNFISRKVATGKLKKMGVSEVEQCDSGKEALRLVTEGLTQREEQGSVDKLPFDY 1046
Query: 907 ILMDVCMPVMDGLKATRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNHFKRIPIIAMTA- 965
I MD MP MDG +ATR IR E + + R PIIA++
Sbjct: 1047 IFMDCQMPEMDGYEATREIRKVEKS----------------------YGVRTPIIAVSGH 1084
Query: 966 NALSESAEECFANGMDSFVSKPV 988
+ SE A E GMD+F+ K +
Sbjct: 1085 DPGSEEARETIQAGMDAFLDKSL 1107
>sp|O49230|ETR1_BRAOL Ethylene receptor 1 OS=Brassica oleracea GN=ETR1 PE=2 SV=1
Length = 735
Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 105/188 (55%), Gaps = 6/188 (3%)
Query: 330 VTDQVRKREKMAKLREEIAVQKAKETELNKTIHIT----EETMRAKQ-MLATMSHEIRSP 384
V DQV A + EE + E N + I E +RA+ LA M+HE+R+P
Sbjct: 299 VADQVAVALSHAAILEESMRARDLLMEQNVALDIARREAETAIRARNDFLAVMNHEMRTP 358
Query: 385 LTGVVSMAEILSNTKLDREQRQLLGVMISSGDLVLQLINDILDLSKVESGVMKLEAAKFR 444
+ +++++ +L T+L EQR ++ ++ S L+ L+ND+LDLS++E G ++LE F
Sbjct: 359 MHAIIALSSLLQETELTPEQRLMVETVLKSSSLLATLMNDVLDLSRLEDGSLQLELGTFN 418
Query: 445 PREVVKHVLQ-TAAASLQKILMLEGDIADDVPIEVIGDVLRIRQILTNLISNAIKFTPEG 503
+ + VL ++ K L + ++A D+P V+GD R+ QI+ N++ NA+KF+ +G
Sbjct: 419 LHTLFREVLNLIKPIAVVKKLPITLNLAPDLPEFVVGDEKRLMQIILNIVGNAVKFSKQG 478
Query: 504 KVGIKLYV 511
+ + V
Sbjct: 479 SISVTALV 486
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 591 WIRCDVYDTGIGIPENALPTLFRKYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVT 650
++R V D G GI +P LF K+ Q + R GG+GLGLAI K+ V LM G + +
Sbjct: 507 YLRVKVKDLGAGINPQDIPKLFTKFAQTQSLATRSSGGSGLGLAISKRFVNLMEGNIWIE 566
Query: 651 SK-VHCGSTFTFILPYQVSPIEENSDDP 677
S+ V G T F + +S + S P
Sbjct: 567 SEGVGKGCTAIFDVKLAISNESKQSGIP 594
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 75/166 (45%), Gaps = 31/166 (18%)
Query: 839 RISQSPSSSSAEVPETKPKPKP------KILLVEDNKINVMVAKSMMKQLGHSIDVVNNG 892
+++ S S + +P+ P+ K+L++++N ++ MV K ++ LG + V++
Sbjct: 581 KLAISNESKQSGIPKVPANPQHVNFAGLKVLVMDENGVSRMVTKGLLVHLGCEVTTVSSN 640
Query: 893 VEAVHAVQCQNYDLILMDVCMPVMDGLK-ATRLIRSFEDTGNWDAAAEAGIEQAMPSSGS 951
E + V + ++ MDVC P ++ + A R+ F
Sbjct: 641 EECLRVVS-HEHRVVFMDVCTPGVENYQIALRIHEKF----------------------- 676
Query: 952 SNHFKRIPIIAMTANALSESAEECFANGMDSFVSKPVTFQKLKECL 997
+ +R ++A+T N + E+C + G+D + KPV+ ++ L
Sbjct: 677 TKRHQRPLLVALTGNTDKSTKEKCMSFGLDGVLLKPVSLDNMRNVL 722
>sp|P49333|ETR1_ARATH Ethylene receptor 1 OS=Arabidopsis thaliana GN=ETR1 PE=1 SV=1
Length = 738
Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 109/190 (57%), Gaps = 10/190 (5%)
Query: 330 VTDQVRKREKMAKLREEIAVQKAKETELNKTIHI------TEETMRAKQ-MLATMSHEIR 382
V DQV A + EE +A++ + + + + E +RA+ LA M+HE+R
Sbjct: 299 VADQVAVALSHAAILEE--SMRARDLLMEQNVALDLARREAETAIRARNDFLAVMNHEMR 356
Query: 383 SPLTGVVSMAEILSNTKLDREQRQLLGVMISSGDLVLQLINDILDLSKVESGVMKLEAAK 442
+P+ +++++ +L T+L EQR ++ ++ S +L+ L+ND+LDLS++E G ++LE
Sbjct: 357 TPMHAIIALSSLLQETELTPEQRLMVETILKSSNLLATLMNDVLDLSRLEDGSLQLELGT 416
Query: 443 FRPREVVKHVLQ-TAAASLQKILMLEGDIADDVPIEVIGDVLRIRQILTNLISNAIKFTP 501
F + + VL ++ K L + ++A D+P V+GD R+ QI+ N++ NA+KF+
Sbjct: 417 FNLHTLFREVLNLIKPIAVVKKLPITLNLAPDLPEFVVGDEKRLMQIILNIVGNAVKFSK 476
Query: 502 EGKVGIKLYV 511
+G + + V
Sbjct: 477 QGSISVTALV 486
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 591 WIRCDVYDTGIGIPENALPTLFRKYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVT 650
++R V D+G GI +P +F K+ Q + R GG+GLGLAI K+ V LM G + +
Sbjct: 506 YLRVKVKDSGAGINPQDIPKIFTKFAQTQSLATRSSGGSGLGLAISKRFVNLMEGNIWIE 565
Query: 651 S 651
S
Sbjct: 566 S 566
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 74/166 (44%), Gaps = 24/166 (14%)
Query: 833 MQEKPDRISQSPSSSSAEVPETKPKPKPKILLVEDNKINVMVAKSMMKQLGHSIDVVNNG 892
+ E+ + QS +P K+L++++N ++ MV K ++ LG + V++
Sbjct: 583 ISERSNESKQSGIPKVPAIPRHSNFTGLKVLVMDENGVSRMVTKGLLVHLGCEVTTVSSN 642
Query: 893 VEAVHAVQCQNYDLILMDVCMPVMDGLK-ATRLIRSFEDTGNWDAAAEAGIEQAMPSSGS 951
E + V + ++ MDVCMP ++ + A R+ F +
Sbjct: 643 EECLRVVS-HEHKVVFMDVCMPGVENYQIALRIHEKF----------------------T 679
Query: 952 SNHFKRIPIIAMTANALSESAEECFANGMDSFVSKPVTFQKLKECL 997
+R ++A++ N + E+C + G+D + KPV+ +++ L
Sbjct: 680 KQRHQRPLLVALSGNTDKSTKEKCMSFGLDGVLLKPVSLDNIRDVL 725
>sp|O14002|MAK2_SCHPO Peroxide stress-activated histidine kinase mak2
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=mak2 PE=3 SV=1
Length = 2310
Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 90/151 (59%), Gaps = 2/151 (1%)
Query: 373 MLATMSHEIRSPLTGVVSMAEILSNTKLDREQRQLLGVMISSGDLVLQLINDILDLSKVE 432
LA MSHE+R+P + M +LS+TKL+ EQ ++ S ++Q+I+D+L+ S+++
Sbjct: 1757 FLANMSHELRTPFSSFYGMLSLLSDTKLNEEQYDIVSTAKQSCTSLVQIIDDLLNFSELK 1816
Query: 433 SGVMKLEAAK-FRPREVVKHVLQTAAASL-QKILMLEGDIADDVPIEVIGDVLRIRQILT 490
SG MKLE K F E + ++ SL K + + DI +VP + GD ++RQ++T
Sbjct: 1817 SGKMKLEPDKVFDVEENIADCIELVYPSLSSKPVQISYDIYPNVPALLAGDSAKLRQVIT 1876
Query: 491 NLISNAIKFTPEGKVGIKLYVVPEPPFAKEG 521
NL+ N++KFT EG + ++ + E A+E
Sbjct: 1877 NLLGNSVKFTTEGHILLRCMAIDEEINAEEN 1907
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 581 SMDEDLEA---TVWIRCDVYDTGIGIPENALPTLFRKYMQVSADHARKYGGTGLGLAICK 637
++DE++ A +R ++ DTGIG+ E L LF + QV R YGG+GLGL+IC
Sbjct: 1897 AIDEEINAEENQCKLRFEIEDTGIGLKEEQLKLLFNPFTQVDGSTTRIYGGSGLGLSICL 1956
Query: 638 QLVELMGGRLTVTSKVHCGSTFTF 661
Q+ ++M G + V S GSTF F
Sbjct: 1957 QICKIMDGDIGVQSVYGEGSTFWF 1980
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 80/185 (43%), Gaps = 29/185 (15%)
Query: 822 SKTNEPQKICE---MQEKPDRISQSPSSSSAEVPETKPKPKPKILLVEDNKINVMVAKSM 878
SK + P K+ E + P ++ Q+ SS E + K L+ EDN I +
Sbjct: 2141 SKWSTPTKLVEPSQFRASPRKVDQAVVLSSEE---KEILQKKYALIAEDNLIARKLLTKQ 2197
Query: 879 MKQLGHSIDVVNNGVEAV---HAVQCQNYDLILMDVCMPVMDGLKATRLIRSFEDTGNWD 935
+ LG + +GVE V A Q Y +I D MP+ DG +A IR++E N
Sbjct: 2198 LSNLGFQVHAAVDGVELVKMYEAKQFGFYSVIFADYHMPIRDGAEAVMDIRAYERENNCS 2257
Query: 936 AAAEAGIEQAMPSSGSSNHFKRIPIIAMTANALSESAEECFANGMDSFVSKPVTFQKLKE 995
IP+IA+TA+ + + C GM+ +++KP T ++L
Sbjct: 2258 TP--------------------IPVIALTADIQKSAKQRCLEVGMNFYLTKPFTQKQLVN 2297
Query: 996 CLEQY 1000
+ ++
Sbjct: 2298 AVREF 2302
>sp|Q7MD16|LUXQ_VIBVY Autoinducer 2 sensor kinase/phosphatase LuxQ OS=Vibrio vulnificus
(strain YJ016) GN=luxQ PE=3 SV=1
Length = 857
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 112/210 (53%), Gaps = 20/210 (9%)
Query: 302 GSKTFLIYVEPVFSKSGETIGVNYMGMDVTDQVRKREKMAKLREEIAVQKAKETELNKTI 361
G K F + P+ ++G + G+ G D+T + EK + L A Q AK
Sbjct: 433 GEKIFRWNLSPIVVENGIS-GIIVQGQDITTLI-DAEKQSNLARREAEQSAKT------- 483
Query: 362 HITEETMRAKQMLATMSHEIRSPLTGVVSMAEILSNTKLDREQRQLLGVMISSGDLVLQL 421
RA LA MSHEIR+PL G++ +A++L + D E + + V+ +SG+ +L +
Sbjct: 484 -------RA-DFLAKMSHEIRTPLNGILGIAQLLKRSVNDAENLKQVDVLCNSGEHLLAV 535
Query: 422 INDILDLSKVESGVMKLEAAKFRPREVVKHVLQTAAASLQKILMLEGDIADDVPI--EVI 479
+NDILD SK+E G ++ F + + + L+ + + + +I + +P+ ++
Sbjct: 536 LNDILDFSKIEQGKFNIKKRDFNFYDTL-NTLENIYRPICREKGVSFEIHNQIPLDCQLH 594
Query: 480 GDVLRIRQILTNLISNAIKFTPEGKVGIKL 509
D +R+ QI+ NLISNA+KFTP G++ +
Sbjct: 595 TDQVRLNQIMFNLISNAVKFTPAGRIEVSF 624
Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 51/81 (62%)
Query: 592 IRCDVYDTGIGIPENALPTLFRKYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVTS 651
+ V DTGIGI E+ L ++F ++Q + R+YGG+GLGL I K LVE++ G ++V S
Sbjct: 637 LSIQVSDTGIGIDESKLESIFEPFVQADSLSTREYGGSGLGLTIVKNLVEMLEGEISVQS 696
Query: 652 KVHCGSTFTFILPYQVSPIEE 672
++ GSTF +P + EE
Sbjct: 697 ELCKGSTFYLSIPVEKGECEE 717
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 31/153 (20%)
Query: 854 TKPKPKP------KILLVEDNKINVMVAKSMMKQLGHSIDVVNNGVEAVHAVQCQNYDLI 907
T PKP+ K+LLVEDN N + K+ ++ S++ V +G +A+ ++ +DLI
Sbjct: 722 TNPKPEQLFGQGLKVLLVEDNHTNAFILKAFCQKYQMSVEWVQDGTQALEKLKEHAFDLI 781
Query: 908 LMDVCMPVMDGLKATRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNHFKRIPIIAMTANA 967
LMD +P M G++ATR IR G PI A TA+A
Sbjct: 782 LMDNQLPKMGGIEATREIRETLKLGT-------------------------PIYACTADA 816
Query: 968 LSESAEECFANGMDSFVSKPVTFQKLKECLEQY 1000
+ +E + G + + KP+ Q+L + L +
Sbjct: 817 QESTKQEFLSAGANRVIVKPIKEQELHDELLHF 849
>sp|Q8D5Z6|LUXQ_VIBVU Autoinducer 2 sensor kinase/phosphatase LuxQ OS=Vibrio vulnificus
(strain CMCP6) GN=luxQ PE=3 SV=1
Length = 857
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 112/210 (53%), Gaps = 20/210 (9%)
Query: 302 GSKTFLIYVEPVFSKSGETIGVNYMGMDVTDQVRKREKMAKLREEIAVQKAKETELNKTI 361
G K F + P+ ++G + G+ G D+T + EK + L A Q AK
Sbjct: 433 GEKIFRWNLSPIVVENGIS-GIIVQGQDITTLI-DAEKQSNLARREAEQSAKT------- 483
Query: 362 HITEETMRAKQMLATMSHEIRSPLTGVVSMAEILSNTKLDREQRQLLGVMISSGDLVLQL 421
RA LA MSHEIR+PL G++ +A++L + D E + + V+ +SG+ +L +
Sbjct: 484 -------RA-DFLAKMSHEIRTPLNGILGIAQLLKRSVNDAENLKQVDVLCNSGEHLLAV 535
Query: 422 INDILDLSKVESGVMKLEAAKFRPREVVKHVLQTAAASLQKILMLEGDIADDVPI--EVI 479
+NDILD SK+E G ++ F + + + L+ + + + +I + +P+ ++
Sbjct: 536 LNDILDFSKIEQGKFNIKKRDFNFYDTL-NTLENIYRPICREKGVSFEIHNQIPLDCQLH 594
Query: 480 GDVLRIRQILTNLISNAIKFTPEGKVGIKL 509
D +R+ QI+ NLISNA+KFTP G++ +
Sbjct: 595 TDQVRLNQIMFNLISNAVKFTPAGRIEVSF 624
Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 51/81 (62%)
Query: 592 IRCDVYDTGIGIPENALPTLFRKYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVTS 651
+ V DTGIGI E+ L ++F ++Q + R+YGG+GLGL I K LVE++ G ++V S
Sbjct: 637 LSIQVSDTGIGIDESKLESIFEPFVQADSLSTREYGGSGLGLTIVKNLVEMLEGEISVQS 696
Query: 652 KVHCGSTFTFILPYQVSPIEE 672
++ GSTF +P + EE
Sbjct: 697 ELCKGSTFYLSIPVEKGECEE 717
Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 31/153 (20%)
Query: 854 TKPKPKP------KILLVEDNKINVMVAKSMMKQLGHSIDVVNNGVEAVHAVQCQNYDLI 907
T PKP+ K+LLVEDN N + K+ ++ S++ V +G +A+ ++ +DLI
Sbjct: 722 TNPKPEQLFGQGLKVLLVEDNHTNAFILKAFCQKYQMSVEWVQDGTQALEKLKEHAFDLI 781
Query: 908 LMDVCMPVMDGLKATRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNHFKRIPIIAMTANA 967
LMD +P M G++ATR IR G PI A TA+A
Sbjct: 782 LMDNQLPKMGGIEATREIRETLKLGT-------------------------PIYACTADA 816
Query: 968 LSESAEECFANGMDSFVSKPVTFQKLKECLEQY 1000
+ +E + G + + KP+ Q+L + L +
Sbjct: 817 QESTKQEFLSAGANRVIVKPIKEQELHDELLHF 849
>sp|P26762|BVGS_BORBR Virulence sensor protein BvgS OS=Bordetella bronchiseptica (strain
ATCC BAA-588 / NCTC 13252 / RB50) GN=bvgS PE=3 SV=2
Length = 1238
Score = 90.1 bits (222), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 149/309 (48%), Gaps = 42/309 (13%)
Query: 223 FLHFVLQNAPVVMGHQDKELRYRFIYNHFP---SLHEEDILGKTDVEIFSGAGVKESQDF 279
F+ ++ P + +DKE R + + + + +LGKT E A V
Sbjct: 583 FMRVLIDGTPNPIYVRDKEGRMLLCNDAYLDTFGVTADAVLGKTIPE----ANVVGDPAL 638
Query: 280 KREV---LEKGLPAKREITFE---TELFG-SKTFLIYVEPVFSKSGETIGVNYMGMDVTD 332
RE+ L + A+RE FE L G ++ + P GE G+ +D+T
Sbjct: 639 AREMHEFLLTRMSAEREPRFEDRDVTLHGRTRHVYQWTVPYGDSLGELKGIIGGWIDIT- 697
Query: 333 QVRKREKMAKLREEIAVQKAKETELNKTIHITEETMRAKQ-MLATMSHEIRSPLTGVVSM 391
E+ LRE + AKE+ + RAK LATMSHEIR+P+ ++ M
Sbjct: 698 -----ERAELLRE---LHDAKES--------ADAANRAKTTFLATMSHEIRTPMNAIIGM 741
Query: 392 AEILSNTKLDRE-QRQLLGVMISSGDLVLQLINDILDLSKVESGVMKLEAAKFRPREVVK 450
E+ D+E RQ + V S +L+LI DILD++K+E+G L + R + +
Sbjct: 742 LELALLRPADQEPDRQSIQVAYDSARSLLELIGDILDIAKIEAGKFDLAPVRTALRALPE 801
Query: 451 HVLQT--AAASLQKI-LMLEGDIA--DDVPIEVIGDVLRIRQILTNLISNAIKFTPEGKV 505
++ A + I L+L+ DI DDV I D LR++Q+L+NL+ NAIKFT EG+V
Sbjct: 802 GAIRVFDGLARQKGIELVLKTDIVGVDDVLI----DPLRMKQVLSNLVGNAIKFTTEGQV 857
Query: 506 GIKLYVVPE 514
+ + P+
Sbjct: 858 VLTVTARPD 866
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 69/146 (47%), Gaps = 19/146 (13%)
Query: 854 TKPKPKPKILLVEDNKINVMVAKSMMKQLGHSIDVVNNGVEAVHAVQCQNYDLILMDVCM 913
+KP+ ++L+V+D+K N+M+ + + LG + ++G A+ +D+++ D M
Sbjct: 967 SKPQVSLRVLVVDDHKPNLMLLRQQLDYLGQRVVAADSGEAALALWHEHAFDVVITDCNM 1026
Query: 914 PVMDGLKATRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNHFKRIPIIAMTANALSESAE 973
P ++G ++ A +A P G + R + TA+A + A+
Sbjct: 1027 PGING---------------YELARRIRAAEAAPGYGRT----RCILFGFTASAQMDEAQ 1067
Query: 974 ECFANGMDSFVSKPVTFQKLKECLEQ 999
C A GMD + KP+ L++ L +
Sbjct: 1068 RCRAAGMDDCLFKPIGVDALRQRLNE 1093
>sp|P54302|LUXQ_VIBHA Autoinducer 2 sensor kinase/phosphatase LuxQ OS=Vibrio harveyi
GN=luxQ PE=1 SV=1
Length = 859
Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 111/208 (53%), Gaps = 24/208 (11%)
Query: 302 GSKTFLIYVEPVFSKSGETIGVNYMGMDVTDQVRKREKMAKLREEIAVQKAKETELNKTI 361
G+K + + P+ G+ G+ G D+T + ++ R E
Sbjct: 432 GNKIYRWNLSPI-RVDGDISGIIVQGQDITTLIEAEKQSNIARRE--------------- 475
Query: 362 HITEETMRAK-QMLATMSHEIRSPLTGVVSMAEILSNTKLDREQRQLLGVMISSGDLVLQ 420
E++ +A+ LA MSHEIR+P+ G++ +A++L ++ +EQ+ + V+ SG+ +L
Sbjct: 476 --AEKSAQARADFLAKMSHEIRTPINGILGVAQLLKDSVDTQEQKNQIDVLCHSGEHLLA 533
Query: 421 LINDILDLSKVESGVMKLEAAKFRPREVVK---HVLQTAAASLQKILMLEGDIADDVPIE 477
++NDILD SK+E G ++ F + ++ ++ + + L++E ++ D +E
Sbjct: 534 VLNDILDFSKIEQGKFNIQKHPFSFTDTMRTLENIYRPICTNKGVELVIENEL--DPNVE 591
Query: 478 VIGDVLRIRQILTNLISNAIKFTPEGKV 505
+ D +R+ QIL NL+SNA+KFTP G +
Sbjct: 592 IFTDQVRLNQILFNLVSNAVKFTPIGSI 619
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%)
Query: 594 CDVYDTGIGIPENALPTLFRKYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVTSKV 653
++ DTGIGI + L +F ++Q + R+YGG+GLGL I K LV+++ G + V S
Sbjct: 638 VELTDTGIGIESDKLDQMFEPFVQEESTTTREYGGSGLGLTIVKNLVDMLEGDVQVRSSK 697
Query: 654 HCGSTFTFILPYQ 666
G+TF LP +
Sbjct: 698 GGGTTFVITLPVK 710
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 25/149 (16%)
Query: 852 PETKPKPKPKILLVEDNKINVMVAKSMMKQLGHSIDVVNNGVEAVHAVQCQNYDLILMDV 911
PE K+LLVEDN N + ++ K+ +D +G++A+ + YDLILMD
Sbjct: 727 PEALFDESLKVLLVEDNHTNAFILQAFCKKYKMQVDWAKDGLDAMELLSDTTYDLILMDN 786
Query: 912 CMPVMDGLKATRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNHFKRIPIIAMTANALSES 971
+P + G++ T IR G PI A TA+ E+
Sbjct: 787 QLPHLGGIETTHEIRQNLRLGT-------------------------PIYACTADTAKET 821
Query: 972 AEECFANGMDSFVSKPVTFQKLKECLEQY 1000
++ A G + + KP+ L E +
Sbjct: 822 SDAFMAAGANYVMLKPIKENALHEAFVDF 850
>sp|P40330|BVGS_BORPA Virulence sensor protein BvgS OS=Bordetella parapertussis (strain
12822 / ATCC BAA-587 / NCTC 13253) GN=bvgS PE=3 SV=2
Length = 1238
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 149/309 (48%), Gaps = 42/309 (13%)
Query: 223 FLHFVLQNAPVVMGHQDKELRYRFIYNHFP---SLHEEDILGKTDVEIFSGAGVKESQDF 279
F+ ++ P + +DKE R + + + + +LGKT E A V
Sbjct: 583 FMRVLIDGTPNPIYVRDKEGRMLLCNDAYLDTFGVTADAVLGKTIPE----ANVVGDPAL 638
Query: 280 KREV---LEKGLPAKREITFE---TELFG-SKTFLIYVEPVFSKSGETIGVNYMGMDVTD 332
RE+ L + A+RE FE L G ++ + P GE G+ +D+T
Sbjct: 639 AREMHEFLLTRMAAEREPRFEDRDVTLHGRTRHVYQWTVPYGDSLGELKGIIGGWIDIT- 697
Query: 333 QVRKREKMAKLREEIAVQKAKETELNKTIHITEETMRAKQ-MLATMSHEIRSPLTGVVSM 391
E+ LRE + AKE+ + RAK LATMSHEIR+P+ ++ M
Sbjct: 698 -----ERAELLRE---LHDAKES--------ADAANRAKTTFLATMSHEIRTPMNAIIGM 741
Query: 392 AEILSNTKLDRE-QRQLLGVMISSGDLVLQLINDILDLSKVESGVMKLEAAKFRPREVVK 450
E+ D+E RQ + V S +L+LI DILD++K+E+G L + R + +
Sbjct: 742 LELALLRPADQEPDRQSIQVAYDSARSLLELIGDILDIAKIEAGKFDLAPVRTALRALPE 801
Query: 451 HVLQT--AAASLQKI-LMLEGDIA--DDVPIEVIGDVLRIRQILTNLISNAIKFTPEGKV 505
++ A + I L+L+ DI DDV I D LR++Q+L+NL+ NAIKFT EG+V
Sbjct: 802 GAIRLFDGLARQKGIELVLKTDIVGVDDVLI----DPLRMKQVLSNLVGNAIKFTTEGQV 857
Query: 506 GIKLYVVPE 514
+ + P+
Sbjct: 858 VLTVTARPD 866
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 69/146 (47%), Gaps = 19/146 (13%)
Query: 854 TKPKPKPKILLVEDNKINVMVAKSMMKQLGHSIDVVNNGVEAVHAVQCQNYDLILMDVCM 913
+KP+ ++L+V+D+K N+M+ + + LG + ++G A+ +D+++ D M
Sbjct: 967 SKPQVSLRVLVVDDHKPNLMLLRQQLDYLGQRVVAADSGEAALALWHEHAFDVVITDCNM 1026
Query: 914 PVMDGLKATRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNHFKRIPIIAMTANALSESAE 973
P ++G ++ A +A P G + R + TA+A + A+
Sbjct: 1027 PGING---------------YELARRIRAAEAAPGYGRT----RCILFGFTASAQMDEAQ 1067
Query: 974 ECFANGMDSFVSKPVTFQKLKECLEQ 999
C A GMD + KP+ L++ L +
Sbjct: 1068 RCRAAGMDDCLFKPIGVDALRQRLNE 1093
>sp|P58402|EVGS_ECO57 Sensor protein EvgS OS=Escherichia coli O157:H7 GN=evgS PE=3 SV=1
Length = 1197
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 92/165 (55%), Gaps = 9/165 (5%)
Query: 352 AKETELNKTIHITEETMRAKQMLATMSHEIRSPLTGVVSMAEILSNTKLDREQR-QLLGV 410
A E E NK I+ T+ Q LATMSHEIR+P++ ++ E+LS + L +EQR + + +
Sbjct: 697 ALEVERNKAIN---ATVAKSQFLATMSHEIRTPISSIMGFLELLSGSGLSKEQRVEAISL 753
Query: 411 MISSGDLVLQLINDILDLSKVESGVMKLEAAKFRPREVVK---HVLQTAAASLQKILMLE 467
++G +L LI +ILD+ K+ESG +L+ +V+ H AAS L
Sbjct: 754 AYATGQSLLGLIGEILDVDKIESGNYQLQPQWVDIPTLVQNTCHSFGAIAASKSIALSCS 813
Query: 468 GDIADDVPIEVIGDVLRIRQILTNLISNAIKFTPEGKVGIKLYVV 512
D +++ D +Q+L+NL+SNA+KFT EG V I +V
Sbjct: 814 STFPDHYLVKI--DPQAFKQVLSNLLSNALKFTTEGAVKITTSLV 856
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 76/153 (49%), Gaps = 27/153 (17%)
Query: 847 SSAEVPETKPKPKPKILLVEDNKINVMVAKSMMKQLGHSIDVVNNGVEAVHAVQCQNYDL 906
+ AE P T P+ K IL+ +D+ N ++ K + LG+ +D +GV+A+H V Q+YDL
Sbjct: 947 AKAEQPITLPE-KLSILIADDHPTNRLLLKRQLNLLGYDVDEATDGVQALHKVSMQHYDL 1005
Query: 907 ILMDVCMPVMDGLKATRLIRSFEDTGNWDAAAEAGIEQAMPSSGSSNHFKRIPIIAMTAN 966
++ DV MP +DG + TR +R EQ +PI +TAN
Sbjct: 1006 LITDVNMPNVDGFELTRKLR----------------EQN----------SSLPIWGLTAN 1039
Query: 967 ALSESAEECFANGMDSFVSKPVTFQKLKECLEQ 999
A + E+ GM+ + KP+T LK L Q
Sbjct: 1040 AQANEREKGLNCGMNLCLFKPLTLDVLKTHLSQ 1072
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 6/93 (6%)
Query: 592 IRCDVYDTGIGIPENALPTLFRKYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVTS 651
I+ + D+G G+ + LF++Y Q SA R+ G+GLGL ICK+L++ M G L++ S
Sbjct: 865 IKMTIMDSGSGLSQEEQQQLFKRYSQTSA--GRQQTGSGLGLMICKELIKNMQGDLSLES 922
Query: 652 KVHCGSTFTFILPY----QVSPIEENSDDPDDL 680
G+TFT +P QV+ +E ++ P L
Sbjct: 923 HPGIGTTFTITIPVEIIQQVAAVEAKAEQPITL 955
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.130 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 371,720,093
Number of Sequences: 539616
Number of extensions: 16501311
Number of successful extensions: 50214
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 502
Number of HSP's successfully gapped in prelim test: 561
Number of HSP's that attempted gapping in prelim test: 48095
Number of HSP's gapped (non-prelim): 2066
length of query: 1002
length of database: 191,569,459
effective HSP length: 127
effective length of query: 875
effective length of database: 123,038,227
effective search space: 107658448625
effective search space used: 107658448625
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 66 (30.0 bits)