BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039717
(131 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LG89|BABL_ARATH Basic blue protein OS=Arabidopsis thaliana GN=ARPN PE=1 SV=2
Length = 129
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 86/129 (66%), Gaps = 3/129 (2%)
Query: 4 QAQGRCSASQATTVAATLIVL--LFLRFHSTEATSTFTVGDTSGWTYNIQSWANGKQFKA 61
A+GR SAS + TL+ + L L+ +A +T+TVGD+ WT+N W GK F+A
Sbjct: 1 MAKGRGSASWSARAIVTLMAVSVLLLQADYVQA-ATYTVGDSGIWTFNAVGWPKGKHFRA 59
Query: 62 GDTLIFNYDASIHNVAVVDGNNYQSCRASPTSKSFSSGKDQIKLSKGRNYFICSIPGHCE 121
GD L+FNY+ +HNV VD +Y +C+ +K ++SGKD+I LSKG+N+FIC+ P HCE
Sbjct: 60 GDVLVFNYNPRMHNVVKVDSGSYNNCKTPTGAKPYTSGKDRITLSKGQNFFICNFPNHCE 119
Query: 122 AGLKLAVDA 130
+ +K+AV A
Sbjct: 120 SDMKIAVTA 128
>sp|P60496|BABL_LILLO Chemocyanin OS=Lilium longiflorum PE=1 SV=1
Length = 126
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 67/94 (71%)
Query: 38 FTVGDTSGWTYNIQSWANGKQFKAGDTLIFNYDASIHNVAVVDGNNYQSCRASPTSKSFS 97
+TVGD GWT+ W GK F+AGD L+F Y+ ++HNV V Y+SC ASP S+ F
Sbjct: 33 YTVGDGGGWTFGTSGWPAGKTFRAGDVLVFKYNPAVHNVVSVPAGGYKSCTASPGSRVFK 92
Query: 98 SGKDQIKLSKGRNYFICSIPGHCEAGLKLAVDAS 131
SG D+I LS+G NYFICS+PGHC+ GLK+AV A+
Sbjct: 93 SGDDRITLSRGTNYFICSVPGHCQGGLKIAVTAA 126
>sp|P00303|BABL_CUCSA Basic blue protein OS=Cucumis sativus PE=1 SV=1
Length = 96
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 72/95 (75%)
Query: 36 STFTVGDTSGWTYNIQSWANGKQFKAGDTLIFNYDASIHNVAVVDGNNYQSCRASPTSKS 95
+ + VG + GWT+N +SW GK+F+AGD L+FNY+ +HNV VV+ + +C +K
Sbjct: 1 AVYVVGGSGGWTFNTESWPKGKRFRAGDILLFNYNPXMHNVVVVNQGGFSTCNTPAGAKV 60
Query: 96 FSSGKDQIKLSKGRNYFICSIPGHCEAGLKLAVDA 130
++SG+DQIKL KG++YFIC+ PGHC++G+K+AV+A
Sbjct: 61 YTSGRDQIKLPKGQSYFICNFPGHCQSGMKIAVNA 95
>sp|P80728|MAVI_CUCPE Mavicyanin OS=Cucurbita pepo PE=1 SV=1
Length = 108
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 60/94 (63%), Gaps = 5/94 (5%)
Query: 40 VGDTSGWT----YNIQSWANGKQFKAGDTLIFNYDASIHNVAVVDGNNYQSCRASPTSKS 95
VGD++GWT Y+ WA+ +F GD+L+FNY+ HNV VD ++SC +S + S
Sbjct: 6 VGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAAS 65
Query: 96 FSSGKDQIKLSK-GRNYFICSIPGHCEAGLKLAV 128
++SG D I L + G YF+C IPGHC+ G K+ +
Sbjct: 66 YTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEI 99
>sp|Q41001|BCP_PEA Blue copper protein OS=Pisum sativum PE=2 SV=1
Length = 189
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 61/96 (63%), Gaps = 3/96 (3%)
Query: 36 STFTVGDTSGWTY--NIQSWANGKQFKAGDTLIFNYDASIHNVAVVDGNNYQSCRASPTS 93
+ +TVGDTSGW + +WA+ K F GD+L+FNY A H V V ++Y+SC + +
Sbjct: 25 TVYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYGAGAHTVDEVKESDYKSCTSGNSI 84
Query: 94 KSFSSGKDQIKLSK-GRNYFICSIPGHCEAGLKLAV 128
+ S+G I L K G++YFIC +PGH G+KL++
Sbjct: 85 STDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSI 120
>sp|P00302|STEL_TOXVR Stellacyanin OS=Toxicodendron vernicifluum PE=1 SV=1
Length = 107
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 59/104 (56%), Gaps = 8/104 (7%)
Query: 36 STFTVGDTSGWTYNI-------QSWANGKQFKAGDTLIFNYDASIHNVAVVDGNNYQSCR 88
+ +TVGD++GW WA+ K F GD L+F YD HNV V NYQSC
Sbjct: 1 TVYTVGDSAGWKVPFFGDVDYDWKWASNKTFHIGDVLVFKYDRRFHNVDKVTQKNYQSCN 60
Query: 89 ASPTSKSFSSGKDQIKL-SKGRNYFICSIPGHCEAGLKLAVDAS 131
+ S+++G B+I L + G+ Y+IC +P HC+ G K+ ++ +
Sbjct: 61 DTTPIASYNTGBBRINLKTVGQKYYICGVPKHCDLGQKVHINVT 104
>sp|O80517|BCB2_ARATH Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 PE=1 SV=1
Length = 202
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 59/96 (61%), Gaps = 6/96 (6%)
Query: 37 TFTVGDTSGWTYNIQSWANGKQFKAGDTLIFNYDASIHNVAVVDGNNYQSCRASPTSKSF 96
T+T+ T+G Y+ WA GK F+ GD L F Y +S H V VVD Y C AS ++++
Sbjct: 31 TYTIEWTTGVDYS--GWATGKTFRVGDILEFKYGSS-HTVDVVDKAGYDGCDASSSTENH 87
Query: 97 SSGKDQIKL-SKGRNYFICSIPGHCE--AGLKLAVD 129
S G +I L + G NYFICS PGHC G+KLAV+
Sbjct: 88 SDGDTKIDLKTVGINYFICSTPGHCRTNGGMKLAVN 123
>sp|Q39131|LAML_ARATH Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1
Length = 172
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 16 TVAATLIVLLFLRFHSTEATST--FTVGDTSGWTYNIQS--WANGKQFKAGDTLIFNYDA 71
TV T +VL FL + +TVG+ W NI WA GK F GD L F +D
Sbjct: 5 TVLITAVVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVFDR 64
Query: 72 SIHNVAVVDGNNYQSCRASPTSKSFS--SGKDQIKLSKGRNYFICSIPGHCEAGLKLAVD 129
+ HN+ V+ +Y+ C A ++++ +G+D + L++ ++Y++ G C G+KL+V
Sbjct: 65 NQHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLSVK 124
Query: 130 AS 131
Sbjct: 125 VE 126
>sp|Q07488|BCB1_ARATH Blue copper protein OS=Arabidopsis thaliana GN=BCB PE=1 SV=2
Length = 196
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 38 FTVGDTSGWTYNIQ-----SWANGKQFKAGDTLIFNYDASIHNVAVVDGNNYQSCRASPT 92
+ VGD + WT + +WA GK F+ GD L F++ A H+VAVV +++C
Sbjct: 25 YDVGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAGRHDVAVVSEAAFENCEKEKP 84
Query: 93 SKSFSSGKDQIKL-SKGRNYFICSIPGHCEAGLKLAV 128
+ +I L + G YFIC++ HC G KL++
Sbjct: 85 ISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSI 121
>sp|Q9SK27|ENL1_ARATH Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060
PE=1 SV=2
Length = 182
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 10/113 (8%)
Query: 24 LLFLRFHSTEATSTFTVGDTSG-W------TYNIQSWANGKQFKAGDTLIFNYDASIHNV 76
L+FL S A + TVG SG W +Y+ WA +FK GD ++F Y++ +V
Sbjct: 19 LIFL--FSLAAANEVTVGGKSGDWKIPPSSSYSFTEWAQKARFKVGDFIVFRYESGKDSV 76
Query: 77 AVVDGNNYQSCRASPTSKSFSSGKDQIKLSK-GRNYFICSIPGHCEAGLKLAV 128
V Y SC + +++ G+ ++KL + G YFI GHCE G KL++
Sbjct: 77 LEVTKEAYNSCNTTNPLANYTDGETKVKLDRSGPFYFISGANGHCEKGQKLSL 129
>sp|P42849|UMEC_ARMRU Umecyanin OS=Armoracia rusticana PE=1 SV=1
Length = 115
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 52 SWANGKQFKAGDTLIFNYDASIHNVAVVDGNNYQSCRASPTSKSFSSGKDQIKL-SKGRN 110
+WA GK F+ GD L F++ A +H+VAVV + + +C+ ++ +I L + G
Sbjct: 22 TWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKENPISHMTTPPVKIMLNTTGPQ 81
Query: 111 YFICSIPGHCEAGLKLAVDA 130
Y+IC++ HC G KL+++
Sbjct: 82 YYICTVGDHCRVGQKLSINV 101
>sp|Q02917|NO552_SOYBN Early nodulin-55-2 OS=Glycine max GN=ENOD55-2 PE=2 SV=1
Length = 187
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 9/127 (7%)
Query: 11 ASQATTVAATLIVLLFLRFHSTEATSTFTVGDTS-GWTY------NIQSWANGKQFKAGD 63
AS + L++L ST + VG + W + ++ WAN +FK GD
Sbjct: 2 ASCLPNASPFLVMLAMCLLISTSEAEKYVVGGSEKSWKFPLSKPDSLSHWANSHRFKIGD 61
Query: 64 TLIFNYDASIHNVAVVDGNNYQSCR-ASPTSKSFSSGKDQIKLSK-GRNYFICSIPGHCE 121
TLIF Y+ +V + +Y+ C F+ G ++ L+K G +FI HC+
Sbjct: 62 TLIFKYEKRTESVHEGNETDYEGCNTVGKYHIVFNGGNTKVMLTKPGFRHFISGNQSHCQ 121
Query: 122 AGLKLAV 128
GLKLAV
Sbjct: 122 MGLKLAV 128
>sp|P93328|NO16_MEDTR Early nodulin-16 OS=Medicago truncatula GN=ENOD16 PE=3 SV=1
Length = 180
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 9/125 (7%)
Query: 12 SQATTVAATLIVLLFLRFHSTEATSTFTVGDT-SGWTYNIQS------WANGKQFKAGDT 64
+ ++ + +I ++L +E+T + +GD+ + W + S WA+ +F GDT
Sbjct: 2 ASSSPILLMIIFSMWLLISHSESTD-YLIGDSHNSWKVPLPSRRAFARWASAHEFTVGDT 60
Query: 65 LIFNYDASIHNVAVVDGNNYQSCRASPTSKSFSSGKDQIKLSK-GRNYFICSIPGHCEAG 123
++F YD +V V+ ++Y C + G ++ L K G +FI HC+ G
Sbjct: 61 ILFEYDNETESVHEVNEHDYIMCHTNGEHVEHHDGNTKVVLDKIGVYHFISGTKRHCKMG 120
Query: 124 LKLAV 128
LKLAV
Sbjct: 121 LKLAV 125
>sp|Q8LC95|ENL3_ARATH Early nodulin-like protein 3 OS=Arabidopsis thaliana GN=At5g25090
PE=1 SV=2
Length = 186
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 7/120 (5%)
Query: 16 TVAATLIVLLFLRFHSTEATSTFTVGDTSGW------TYNIQSWANGKQFKAGDTLIFNY 69
T+ AT ++ FL + + G TS W + ++ WA +F+ GDTL++ Y
Sbjct: 5 TLVATFFLIFFLLTNLVCSKEIIVGGKTSSWKIPSSPSESLNKWAESLRFRVGDTLVWKY 64
Query: 70 DASIHNVAVVDGNNYQSCRASPTSKSFSSGKDQIKLSK-GRNYFICSIPGHCEAGLKLAV 128
D +V V + Y +C + + ++S+G ++KL + G +FI +C G KL +
Sbjct: 65 DEEKDSVLQVTKDAYINCNTTNPAANYSNGDTKVKLERSGPYFFISGSKSNCVEGEKLHI 124
>sp|P29602|CPC_CUCSA Cucumber peeling cupredoxin OS=Cucumis sativus PE=1 SV=3
Length = 137
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 24/107 (22%)
Query: 40 VGDTSGWTY----NIQS-WANGKQFKAGDTLIFNYDASIHNVAVVD-GNNYQSC------ 87
VGD +GW+ N S WA GK F+ GD+L FN+ A+ HNV ++ ++ +C
Sbjct: 7 VGDNTGWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNFVNSD 66
Query: 88 ----RASPTSKSFSSGKDQIKLSKGRNYFICSIPGHCEAGLKLAVDA 130
R SP + D++ G +YF+C++ HC G KL+++
Sbjct: 67 NDVERTSPVIERL----DEL----GMHYFVCTVGTHCSNGQKLSINV 105
>sp|P93329|NO20_MEDTR Early nodulin-20 OS=Medicago truncatula GN=ENOD20 PE=3 SV=1
Length = 268
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 9/125 (7%)
Query: 12 SQATTVAATLIVLLFLRFHSTEATSTFTVGDTSG-WTYNIQS------WANGKQFKAGDT 64
S ++ + I +++ +E+T + VGD+ W + + + WA+ QF GDT
Sbjct: 2 SSSSPILLMFIFSIWMLISYSESTD-YLVGDSENSWKFPLPTRHALTRWASNYQFIVGDT 60
Query: 65 LIFNYDASIHNVAVVDGNNYQSCRASPTSKSFSSGKDQIKLSK-GRNYFICSIPGHCEAG 123
+ F Y+ +V V+ +Y C G + L K G ++FI HC G
Sbjct: 61 ITFQYNNKTESVHEVEEEDYDRCGIRGEHVDHYDGNTMVVLKKTGIHHFISGKKRHCRLG 120
Query: 124 LKLAV 128
LKLAV
Sbjct: 121 LKLAV 125
>sp|Q9T076|ENL2_ARATH Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520
PE=1 SV=1
Length = 349
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 38 FTVGDTSGW----TYNIQSWANGKQFKAGDTLIFNYDASIHNVAVVDGNNYQSCRASPTS 93
F VG + W N +SW+ +F DTL F+Y +V V+ +Y +C
Sbjct: 31 FNVGGSGAWVTNPPENYESWSGKNRFLVHDTLYFSYAKGADSVLEVNKADYDACNTKNPI 90
Query: 94 KSFSSGKDQIKLSK-GRNYFICSIPGHCEAGLKLAV 128
K G +I L + G YFI +C+ G KL V
Sbjct: 91 KRVDDGDSEISLDRYGPFYFISGNEDNCKKGQKLNV 126
>sp|Q5JNJ5|ENL1_ORYSJ Early nodulin-like protein 1 OS=Oryza sativa subsp. japonica
GN=ENODL1 PE=1 SV=1
Length = 237
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 12/130 (9%)
Query: 10 SASQATTVAATLIVLLFLR--FHSTEATSTFTVGDTSGWTYN----IQSWANGKQFKAGD 63
AS+ AA + +L L F S+EA F G GW + WA +F+ D
Sbjct: 2 EASRRWPYAAWFMAVLGLVAVFSSSEAY-VFYAGGRDGWVVDPAESFNYWAERNRFQVND 60
Query: 64 TLIFNYDASI-HNVAVVDGNNYQSCR-ASPTSK--SFSSGKDQIKLSK-GRNYFICSIPG 118
T++F +D + +V V ++ +C +P + ++G+ + + G +FI
Sbjct: 61 TIVFLHDDEVGGSVLQVTEGDFDTCSTGNPVQRLEDVAAGRSVFRFDRSGPFFFISGDED 120
Query: 119 HCEAGLKLAV 128
C+ G KL +
Sbjct: 121 RCQKGQKLYI 130
>sp|Q05544|NO551_SOYBN Early nodulin-55-1 (Fragment) OS=Glycine max GN=ENOD55-1 PE=2 SV=1
Length = 137
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 69 YDASIHNVAVVDGNNYQSCR-ASPTSKSFSSGKDQIKLSK-GRNYFICSIPGHCEAGLKL 126
YD +V V+ +Y+ C F+ G ++ L+K G +FI HC+ GLKL
Sbjct: 2 YDERTESVHEVNETDYEQCNTVGKEHVLFNDGNTKVMLTKSGFRHFISGNQSHCQMGLKL 61
Query: 127 AV 128
V
Sbjct: 62 MV 63
>sp|P00304|MPAA3_AMBEL Pollen allergen Amb a 3 OS=Ambrosia artemisiifolia var. elatior
PE=1 SV=2
Length = 101
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 53 WANGKQFKAGDTLIFNYDASIHNVA-VVDGNNYQSCRASPTSKSFSSGKDQIKLSKGRNY 111
W+ +QFK D L FN+ +VA V Y +C + G D+ L ++
Sbjct: 26 WSARQQFKTTDVLWFNFTTGEDSVAEVWREEAYHACDIKDPIRLEPGGPDRFTLLTPGSH 85
Query: 112 FICS 115
FIC+
Sbjct: 86 FICT 89
>sp|Q9FGD2|Y5698_ARATH Putative B3 domain-containing protein At5g66980 OS=Arabidopsis
thaliana GN=At5g66980 PE=3 SV=1
Length = 334
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Query: 32 TEATST-FTVGDTSGWTYNIQSWANGKQFKAGDTLIFNYDAS 72
TE T F V T GW QS+AN + + GD L+F+YD
Sbjct: 57 TEDTEERFCVFFTKGW----QSFANDQSLEFGDFLVFSYDGD 94
>sp|P76501|YFCR_ECOLI Uncharacterized protein YfcR OS=Escherichia coli (strain K12)
GN=yfcR PE=4 SV=1
Length = 170
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 14/83 (16%)
Query: 1 MARQAQGRCSASQATTVAATLIVLLFLRFHSTEATSTFTVGDTSGWTYNIQSW------- 53
+ Q +G S TV +T I L +R ++ S F VG+ S +NI +
Sbjct: 87 LRMQLKGNTSTINGETVLSTNITGLGIRIENSADNSLFAVGENSWTPFNINNQPQLKAVP 146
Query: 54 --ANGKQFKAGD-----TLIFNY 69
A+G Q AG+ T++ +Y
Sbjct: 147 VKASGAQLAAGEFNASLTMVVDY 169
>sp|A6KXK3|FABH_BACV8 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Bacteroides vulgatus
(strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=fabH PE=3
SV=1
Length = 334
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 16/27 (59%)
Query: 41 GDTSGWTYNIQSWANGKQFKAGDTLIF 67
G+TSG T + W KQ K GD LIF
Sbjct: 285 GNTSGATLPLCLWDYEKQLKKGDNLIF 311
>sp|A2ASS6|TITIN_MOUSE Titin OS=Mus musculus GN=Ttn PE=1 SV=1
Length = 35213
Score = 29.3 bits (64), Expect = 7.2, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 7/78 (8%)
Query: 10 SASQATTVAATLIVLLFLRFHSTEATSTFTVGDTSGWT-------YNIQSWANGKQFKAG 62
+A Q +VA LI+ F T T D + ++ N++ + NG++ K G
Sbjct: 14595 TAGQDKSVAELLIIEAPTEFVEHLEDQTVTEFDDAVFSCQLSREKANVKWYRNGREIKEG 14654
Query: 63 DTLIFNYDASIHNVAVVD 80
F D SIH + + D
Sbjct: 14655 KKYKFEKDGSIHRLIIKD 14672
>sp|Q54M64|NUDC_DICDI Nuclear movement protein nudC OS=Dictyostelium discoideum GN=nudc
PE=3 SV=1
Length = 171
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 73 IHNVAVVDGNNYQSCRASPTSKSFSSGKD-QIKL--SKGRNYFICSIPGHCEAGL 124
I N ++DG Y++ + S + + SGK+ +I+L KG+ ++ C I G E +
Sbjct: 52 ITNDTIIDGKLYKNVKKSDCNWTLESGKNLEIELFKLKGQEWWSCIIQGESEIDV 106
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.128 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,739,758
Number of Sequences: 539616
Number of extensions: 1645294
Number of successful extensions: 3297
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 3258
Number of HSP's gapped (non-prelim): 29
length of query: 131
length of database: 191,569,459
effective HSP length: 97
effective length of query: 34
effective length of database: 139,226,707
effective search space: 4733708038
effective search space used: 4733708038
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)