Query 039719
Match_columns 186
No_of_seqs 198 out of 1586
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 21:52:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039719.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039719hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gme_A Heat shock protein 16.9 99.9 2.7E-27 9.1E-32 184.2 12.3 100 69-169 40-151 (151)
2 4eld_A MJ16.5-P1, small heat s 99.9 7E-26 2.4E-30 177.6 11.8 93 72-168 56-161 (161)
3 3gla_A Low molecular weight he 99.9 5.8E-25 2E-29 159.3 12.8 86 70-156 2-99 (100)
4 4fei_A Heat shock protein-rela 99.9 1.1E-24 3.7E-29 158.9 13.0 87 70-157 4-97 (102)
5 3l1e_A Alpha-crystallin A chai 99.9 1.3E-24 4.6E-29 159.7 13.3 96 73-169 3-106 (106)
6 3aab_A Putative uncharacterize 99.9 5.4E-25 1.8E-29 165.4 9.3 106 37-157 3-118 (123)
7 2klr_A Alpha-crystallin B chai 99.9 1.9E-24 6.5E-29 172.1 10.6 99 73-174 64-168 (175)
8 2wj5_A Heat shock protein beta 99.9 8.1E-24 2.8E-28 154.2 9.9 90 74-167 3-98 (101)
9 3q9p_A Heat shock protein beta 99.9 4E-23 1.4E-27 146.1 10.5 77 77-154 2-84 (85)
10 2y1y_A Alpha-crystallin B chai 99.9 8.2E-22 2.8E-26 140.6 11.0 80 78-158 2-87 (90)
11 2bol_A TSP36, small heat shock 99.8 3.9E-21 1.3E-25 165.4 9.4 86 71-157 97-191 (314)
12 2bol_A TSP36, small heat shock 99.8 1.8E-18 6.3E-23 148.7 10.5 81 73-154 221-313 (314)
13 2xcm_C SGT1-like protein, cyto 99.1 2.2E-10 7.5E-15 80.6 8.0 81 72-156 2-82 (92)
14 1rl1_A Suppressor of G2 allele 99.1 3.2E-10 1.1E-14 83.1 9.0 82 71-156 8-89 (114)
15 3eud_A Protein SHQ1; CS domain 98.4 2.2E-06 7.7E-11 63.1 10.3 80 70-158 15-99 (115)
16 2k8q_A Protein SHQ1; beta-sand 98.4 3.7E-07 1.3E-11 69.1 6.0 78 72-158 3-85 (134)
17 3igf_A ALL4481 protein; two-do 98.3 1.3E-06 4.4E-11 76.4 8.2 71 73-154 298-369 (374)
18 1x5m_A Calcyclin-binding prote 98.0 7.9E-05 2.7E-09 55.4 10.7 81 72-156 20-104 (127)
19 1wh0_A Ubiquitin carboxyl-term 97.9 4.9E-05 1.7E-09 57.4 8.6 85 71-156 18-112 (134)
20 1wgv_A KIAA1068 protein; CS do 97.8 0.00028 9.7E-09 52.1 11.0 83 70-156 17-102 (124)
21 1ejf_A Progesterone receptor P 97.7 0.00023 8E-09 52.7 9.1 79 73-156 4-82 (125)
22 2o30_A Nuclear movement protei 97.6 0.00037 1.3E-08 52.0 9.3 76 72-155 4-80 (131)
23 3qor_A Nuclear migration prote 97.6 0.00076 2.6E-08 49.7 10.7 80 70-156 14-97 (121)
24 1wfi_A Nuclear distribution ge 97.6 0.00022 7.7E-09 53.1 7.3 80 70-156 5-88 (131)
25 2rh0_A NUDC domain-containing 97.5 0.00073 2.5E-08 52.1 10.3 78 71-156 12-91 (157)
26 2kmw_A Uncharacterized protein 97.4 0.00034 1.2E-08 53.7 7.0 78 72-156 4-82 (150)
27 2cg9_X CO-chaperone protein SB 97.3 0.00017 5.7E-09 54.3 3.3 82 71-155 5-97 (134)
28 3q9p_A Heat shock protein beta 75.5 6.9 0.00024 26.1 5.6 34 121-155 7-40 (85)
29 3gla_A Low molecular weight he 72.3 13 0.00045 25.1 6.6 34 122-156 15-48 (100)
30 4eld_A MJ16.5-P1, small heat s 69.8 20 0.00069 26.6 7.6 29 126-155 71-99 (161)
31 4fei_A Heat shock protein-rela 67.5 7.8 0.00027 26.7 4.5 33 83-116 62-95 (102)
32 2y1y_A Alpha-crystallin B chai 64.9 11 0.00036 25.4 4.7 34 121-155 6-39 (90)
33 2cql_A OK/SW-CL.103, 60S ribos 64.1 9.1 0.00031 26.8 4.3 46 95-153 20-68 (100)
34 3l1e_A Alpha-crystallin A chai 63.2 14 0.00046 25.7 5.1 33 121-154 12-44 (106)
35 3j21_F 50S ribosomal protein L 61.7 9.9 0.00034 29.6 4.5 45 95-152 14-58 (184)
36 1nkw_E 50S ribosomal protein L 61.1 17 0.0006 28.9 5.9 46 95-154 39-84 (212)
37 2wj5_A Heat shock protein beta 60.3 14 0.00047 25.4 4.7 34 121-155 11-44 (101)
38 3aab_A Putative uncharacterize 57.1 21 0.00073 25.2 5.4 33 123-156 36-69 (123)
39 1rl6_A Protein (ribosomal prot 54.6 20 0.0007 27.6 5.2 46 95-154 11-56 (177)
40 1gme_A Heat shock protein 16.9 54.4 17 0.00058 26.9 4.6 32 83-115 105-137 (151)
41 1vq8_E 50S ribosomal protein L 52.8 21 0.00072 27.6 5.0 47 95-154 9-55 (178)
42 2nwt_A UPF0165 protein AF_2212 50.9 11 0.00039 24.8 2.7 17 136-152 3-19 (69)
43 3v2d_H 50S ribosomal protein L 50.1 23 0.00079 27.3 4.8 44 95-152 12-55 (180)
44 3iz5_F 60S ribosomal protein L 48.2 27 0.00093 27.2 5.0 46 95-153 13-60 (190)
45 1rl1_A Suppressor of G2 allele 48.0 25 0.00084 24.3 4.4 35 81-116 53-88 (114)
46 3u5e_H L8, RP24, YL11, 60S rib 46.4 32 0.0011 26.8 5.2 46 95-153 13-59 (191)
47 2klr_A Alpha-crystallin B chai 42.3 34 0.0012 26.1 4.7 33 122-155 74-106 (175)
48 4a17_E RPL9, 60S ribosomal pro 39.7 20 0.0007 27.9 3.0 46 94-152 12-58 (188)
49 3bbo_I Ribosomal protein L6; l 32.9 14 0.00048 29.7 1.1 46 95-153 54-99 (223)
50 2zkr_e 60S ribosomal protein L 32.1 47 0.0016 25.9 4.0 51 91-154 9-62 (192)
51 1ew4_A CYAY protein; friedreic 30.8 32 0.0011 24.2 2.6 16 137-152 29-44 (106)
52 3jx8_A Putative lipoprotein; s 30.5 1.9E+02 0.0066 22.5 7.8 41 74-115 33-73 (250)
53 1n91_A ORF, hypothetical prote 30.1 86 0.0029 22.1 4.8 37 77-115 8-45 (108)
54 3oeq_A Frataxin homolog, mitoc 29.6 36 0.0012 24.7 2.8 15 138-152 49-63 (123)
55 2o30_A Nuclear movement protei 28.3 78 0.0027 22.5 4.5 31 122-152 15-45 (131)
56 3r8s_G 50S ribosomal protein L 27.8 20 0.00069 27.6 1.2 42 95-150 11-52 (176)
57 2ks0_A Uncharacterized protein 27.6 35 0.0012 22.4 2.2 22 92-114 17-38 (71)
58 2kgs_A Uncharacterized protein 24.3 54 0.0019 23.6 2.9 61 90-151 2-92 (132)
59 2uwa_A Cellulase; glycoside hy 24.1 97 0.0033 25.1 4.8 15 118-132 60-74 (274)
60 1pyv_A ATP synthase beta chain 23.0 33 0.0011 20.6 1.2 11 1-11 1-11 (54)
61 3qqz_A Putative uncharacterize 21.5 2E+02 0.0068 22.8 6.1 61 89-150 21-86 (255)
62 3h0x_A 78 kDa glucose-regulate 21.2 2.2E+02 0.0076 20.7 5.9 29 138-169 85-114 (152)
63 3t3l_A Frataxin, mitochondrial 20.2 63 0.0021 23.5 2.5 17 136-152 40-56 (129)
No 1
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.95 E-value=2.7e-27 Score=184.24 Aligned_cols=100 Identities=47% Similarity=0.721 Sum_probs=87.3
Q ss_pred ccccceeEEEECCCEEEEEEecCCCCcccEEEEEEeCcEEEEEEEEece------------eeeeEEEEEEEcCCCCCcC
Q 039719 69 TLALARADWMETPTIHVITLDIPVMKKDNVKIEVEENRVLRVSGERKTE------------WTFGKFWRQFRMHMSTDLD 136 (186)
Q Consensus 69 ~~~~p~vdi~e~~~~y~l~v~LPG~~~edi~V~v~~~~~L~I~g~~~~~------------~~~~~f~R~~~LP~~vd~~ 136 (186)
..+.|++||+|++++|+|.++|||++++||+|++++++.|+|+|++..+ +.+|+|.|+|.||.+||.+
T Consensus 40 ~~~~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~ 119 (151)
T 1gme_A 40 AFANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVE 119 (151)
T ss_dssp HHGGGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGG
T ss_pred cccCCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCcccc
Confidence 3467899999999999999999999999999999643799999987653 3579999999999999999
Q ss_pred ceEEEEeCCEEEEEEeccCcccCCCCeEEEecc
Q 039719 137 HIKAHTENGILRVTVPKLAEEKKRQPEVINIDE 169 (186)
Q Consensus 137 ~i~A~~~nGvL~I~lPK~~~~~~~~~k~I~I~~ 169 (186)
+|+|+|+||+|+|++||.++.+ .+.++|+|++
T Consensus 120 ~i~A~~~nGvL~I~lPK~~~~~-~~~~~I~I~~ 151 (151)
T 1gme_A 120 EVKAGLENGVLTVTVPKAEVKK-PEVKAIQISG 151 (151)
T ss_dssp GCEEEEETTEEEEEEECCCCCT-TCCCCCCCCC
T ss_pred ceEEEEECCEEEEEEEccCcCC-CCCeEeeeCC
Confidence 9999999999999999987653 3467888864
No 2
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.93 E-value=7e-26 Score=177.62 Aligned_cols=93 Identities=18% Similarity=0.291 Sum_probs=84.7
Q ss_pred cceeEEEECCCEEEEEEecCCCCcccEEEEEEeCcEEEEEEEEece------------e-eeeEEEEEEEcCCCCCcCce
Q 039719 72 LARADWMETPTIHVITLDIPVMKKDNVKIEVEENRVLRVSGERKTE------------W-TFGKFWRQFRMHMSTDLDHI 138 (186)
Q Consensus 72 ~p~vdi~e~~~~y~l~v~LPG~~~edi~V~v~~~~~L~I~g~~~~~------------~-~~~~f~R~~~LP~~vd~~~i 138 (186)
.+++||+|++++|+|.++|||++++||+|++++ +.|+|+|+++.. + .+|+|.|+|.||.+||.++|
T Consensus 56 ~~pvdi~e~~~~~~v~~dlPG~~~edi~V~~~~-~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i 134 (161)
T 4eld_A 56 FMPISIIEGDQHIKVIAWLPGVNKEDIILNAVG-DTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENA 134 (161)
T ss_dssp CCCEEEEECSSEEEEEEECTTCCGGGEEEEEET-TEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGC
T ss_pred ccceeEEEeCCEEEEEEECCCCChHhEEEEEEC-CEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccccE
Confidence 445999999999999999999999999999999 899999998762 3 67899999999999999999
Q ss_pred EEEEeCCEEEEEEeccCcccCCCCeEEEec
Q 039719 139 KAHTENGILRVTVPKLAEEKKRQPEVINID 168 (186)
Q Consensus 139 ~A~~~nGvL~I~lPK~~~~~~~~~k~I~I~ 168 (186)
+|+|+||+|+|++||.+.+ ++|+|+|+
T Consensus 135 ~A~~~nGvL~I~lpK~~~~---~~r~I~Ie 161 (161)
T 4eld_A 135 SAKFENGVLSVILPKAESS---IKKGINIE 161 (161)
T ss_dssp EEEEETTEEEEEEEBCGGG---SCCCCCCC
T ss_pred EEEEECCEEEEEEEcCCCC---CCcEeecC
Confidence 9999999999999998765 37888885
No 3
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.92 E-value=5.8e-25 Score=159.26 Aligned_cols=86 Identities=30% Similarity=0.555 Sum_probs=78.8
Q ss_pred cccceeEEEECCCEEEEEEecCCCCcccEEEEEEeCcEEEEEEEEece------------eeeeEEEEEEEcCCCCCcCc
Q 039719 70 LALARADWMETPTIHVITLDIPVMKKDNVKIEVEENRVLRVSGERKTE------------WTFGKFWRQFRMHMSTDLDH 137 (186)
Q Consensus 70 ~~~p~vdi~e~~~~y~l~v~LPG~~~edi~V~v~~~~~L~I~g~~~~~------------~~~~~f~R~~~LP~~vd~~~ 137 (186)
.+.|++||+|++++|+|.++|||++++||+|++++ +.|+|+|++..+ +.+|+|.|+|.||.+||.++
T Consensus 2 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~-~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~ 80 (100)
T 3gla_A 2 QWVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDK-GILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADG 80 (100)
T ss_dssp CSCCCEEEEECSSEEEEEEECTTSCGGGCEEEEET-TEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTS
T ss_pred CccCcEEEEECCCEEEEEEECCCCCHHHEEEEEEC-CEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHH
Confidence 36789999999999999999999999999999998 899999998753 36789999999999999999
Q ss_pred eEEEEeCCEEEEEEeccCc
Q 039719 138 IKAHTENGILRVTVPKLAE 156 (186)
Q Consensus 138 i~A~~~nGvL~I~lPK~~~ 156 (186)
|+|+|+||+|+|++||.++
T Consensus 81 i~A~~~~GvL~I~~pK~~~ 99 (100)
T 3gla_A 81 ITAAGRNGVLEIRIPKRPA 99 (100)
T ss_dssp CEEEEETTEEEEEEEBC--
T ss_pred eEEEEeCCEEEEEEecCCC
Confidence 9999999999999999864
No 4
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.92 E-value=1.1e-24 Score=158.88 Aligned_cols=87 Identities=25% Similarity=0.323 Sum_probs=81.5
Q ss_pred cccceeEEEECCCEEEEEEecCCCCcccEEEEEEeCcEEEEEEEEece-------eeeeEEEEEEEcCCCCCcCceEEEE
Q 039719 70 LALARADWMETPTIHVITLDIPVMKKDNVKIEVEENRVLRVSGERKTE-------WTFGKFWRQFRMHMSTDLDHIKAHT 142 (186)
Q Consensus 70 ~~~p~vdi~e~~~~y~l~v~LPG~~~edi~V~v~~~~~L~I~g~~~~~-------~~~~~f~R~~~LP~~vd~~~i~A~~ 142 (186)
.+.|++||+|++++|+|.++|||++++||+|++++ +.|+|+|+++.+ +.+|+|.|+|.||.+||.+.|+|+|
T Consensus 4 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~-~~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~i~A~~ 82 (102)
T 4fei_A 4 PWTPAADWRDAGTHLDLLLDVPGVDAGTLALAEDG-GQLTVSGERPGTEHLLRSERPSGRFVRELAFPEPVRPASGVASL 82 (102)
T ss_dssp ECCCCEEEEEETTEEEEEEECTTCCGGGCEEEEET-TEEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCBCTTCCEEEE
T ss_pred cccCcEEEEEcCCEEEEEEECCCCchHhEEEEEEC-CEEEEEEEEecCCCEEEEEEeccEEEEEEECCCCcchhHcEEEE
Confidence 46799999999999999999999999999999999 899999998654 4889999999999999999999999
Q ss_pred eCCEEEEEEeccCcc
Q 039719 143 ENGILRVTVPKLAEE 157 (186)
Q Consensus 143 ~nGvL~I~lPK~~~~ 157 (186)
+||+|+|++||.++.
T Consensus 83 ~~GvL~I~lpK~~~~ 97 (102)
T 4fei_A 83 AGGVLTVRFEKLRPT 97 (102)
T ss_dssp ETTEEEEEEEBSSCC
T ss_pred ECCEEEEEEEccCcc
Confidence 999999999998765
No 5
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.92 E-value=1.3e-24 Score=159.70 Aligned_cols=96 Identities=17% Similarity=0.367 Sum_probs=85.9
Q ss_pred ceeEEEECCCEEEEEEecCCCCcccEEEEEEeCcEEEEEEEEece-----eeeeEEEEEEEcCCCCCcCceEEEE-eCCE
Q 039719 73 ARADWMETPTIHVITLDIPVMKKDNVKIEVEENRVLRVSGERKTE-----WTFGKFWRQFRMHMSTDLDHIKAHT-ENGI 146 (186)
Q Consensus 73 p~vdi~e~~~~y~l~v~LPG~~~edi~V~v~~~~~L~I~g~~~~~-----~~~~~f~R~~~LP~~vd~~~i~A~~-~nGv 146 (186)
...||+|++++|.|.++||||+++||+|++++ +.|+|+|++... |..+.|.|+|.||.+||.++|+|+| +||+
T Consensus 3 g~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~~Gv 81 (106)
T 3l1e_A 3 GISEVRSDRDKFVIFLDVKHFSPEDLTVKVQE-DFVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSADGM 81 (106)
T ss_dssp CSEEEEECSSEEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEEEETTTEEEEEEEEEEEECCTTBCTTSCEEEECTTSE
T ss_pred CceEEEEcCCEEEEEEECCCCChHHEEEEEEC-CEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCE
Confidence 35899999999999999999999999999999 899999997643 6778899999999999999999999 8999
Q ss_pred EEEEEeccCccc--CCCCeEEEecc
Q 039719 147 LRVTVPKLAEEK--KRQPEVINIDE 169 (186)
Q Consensus 147 L~I~lPK~~~~~--~~~~k~I~I~~ 169 (186)
|+|++||.++.. ..++|+|+|+.
T Consensus 82 L~I~~PK~~~~~~~~~~~r~I~I~r 106 (106)
T 3l1e_A 82 LTFSGPKIPSGVDAGHSERAIPVSR 106 (106)
T ss_dssp EEEEEEBCCCCTTTTSSSCCCCCCC
T ss_pred EEEEEEccCcccccCCCCeEeeecC
Confidence 999999998753 23688998863
No 6
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.92 E-value=5.4e-25 Score=165.42 Aligned_cols=106 Identities=20% Similarity=0.227 Sum_probs=81.4
Q ss_pred CcccccCCcccchhhhcccCcccccCCCccccccccceeEEEECCCEEEEEEecCCCCcccEEEEEEeCcEEEEEEEEec
Q 039719 37 PFFDMMFPMTEESFRVLEQTPLTIAKGADHHQTLALARADWMETPTIHVITLDIPVMKKDNVKIEVEENRVLRVSGERKT 116 (186)
Q Consensus 37 ~l~d~~~~~f~d~F~~~~~~~~~~~~~~~~~~~~~~p~vdi~e~~~~y~l~v~LPG~~~edi~V~v~~~~~L~I~g~~~~ 116 (186)
.++++|.++|++.++.+. ..+.|++||+|++++|.|.++|||++++||+|++++++.|+|+|++..
T Consensus 3 ~~~~em~~~~~~~~~~~~--------------~~~~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~ 68 (123)
T 3aab_A 3 YLGKELQKRSEELSRGFY--------------ELVYPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREI 68 (123)
T ss_dssp -----------CCCHHHH--------------HHHCSCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCC
T ss_pred hHHHHHHHHHHHHhhhcc--------------ccCCCcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEec
Confidence 355666665655554332 124588999999999999999999999999999998469999999765
Q ss_pred e---------eeeeEEEEEEEcCCCCCcCce-EEEEeCCEEEEEEeccCcc
Q 039719 117 E---------WTFGKFWRQFRMHMSTDLDHI-KAHTENGILRVTVPKLAEE 157 (186)
Q Consensus 117 ~---------~~~~~f~R~~~LP~~vd~~~i-~A~~~nGvL~I~lPK~~~~ 157 (186)
+ +.+ +|.|+|.||.+||.++| +|+|+||+|+|++||.+..
T Consensus 69 ~~~~~~~~~Er~~-~f~R~~~LP~~vd~~~i~~A~~~~GvL~I~lPK~~~~ 118 (123)
T 3aab_A 69 TEPGVKYLTQRPK-YVRKVIRLPYNVAKDAEISGKYENGVLTIRIPIAGTS 118 (123)
T ss_dssp CCCSCEEEECSCS-EEEEEEECSSEECTTCCCEEEEETTEEEEEEEGGGEE
T ss_pred cCCCeEEEEEEeE-EEEEEEECCCCcCcchhCeeEEcCCEEEEEEEcCCCC
Confidence 3 234 89999999999999999 9999999999999998654
No 7
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.91 E-value=1.9e-24 Score=172.09 Aligned_cols=99 Identities=19% Similarity=0.318 Sum_probs=72.0
Q ss_pred ceeEEEECCCEEEEEEecCCCCcccEEEEEEeCcEEEEEEEEece-----eeeeEEEEEEEcCCCCCcCceEEEE-eCCE
Q 039719 73 ARADWMETPTIHVITLDIPVMKKDNVKIEVEENRVLRVSGERKTE-----WTFGKFWRQFRMHMSTDLDHIKAHT-ENGI 146 (186)
Q Consensus 73 p~vdi~e~~~~y~l~v~LPG~~~edi~V~v~~~~~L~I~g~~~~~-----~~~~~f~R~~~LP~~vd~~~i~A~~-~nGv 146 (186)
..+||+|++++|.|.++|||++++||+|++++ +.|+|+|+++.+ +..+.|.|+|.||.+||.++|+|+| +||+
T Consensus 64 ~~~dv~e~~d~~~v~~dlPG~~~edI~V~v~~-~~L~I~g~~~~~~~~~~~~~reF~R~~~LP~~Vd~~~i~A~~s~dGv 142 (175)
T 2klr_A 64 GLSEMRLEKDRFSVNLDVKHFSPEELKVKVLG-DVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSLSSDGV 142 (175)
T ss_dssp -----CCCCSEEEEEECCSSCCGGGEEEEEET-TEEEEEEEEEEEEETTEEEEEEEEEEEECTTTCCTTTCEEEECTTSC
T ss_pred CceEEEEcCCeEEEEEECCCCChHHEEEEEEC-CEEEEEEEEcccccCCceEEEEEEEEEECCCCcChhHeEEEEcCCCE
Confidence 35899999999999999999999999999999 899999998653 5667899999999999999999999 7999
Q ss_pred EEEEEeccCcccCCCCeEEEeccCCCCC
Q 039719 147 LRVTVPKLAEEKKRQPEVINIDEESCNS 174 (186)
Q Consensus 147 L~I~lPK~~~~~~~~~k~I~I~~~~~~~ 174 (186)
|+|++||.+..+ ..|+|+|+.++..+
T Consensus 143 L~I~lPK~~~~~--~~r~I~I~~~~~~~ 168 (175)
T 2klr_A 143 LTVNGPRKQVSG--PERTIPITREEKPA 168 (175)
T ss_dssp EEEEEECC--------------------
T ss_pred EEEEEECCCCCC--CCeEEEEecCCccc
Confidence 999999986542 36899999765533
No 8
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.90 E-value=8.1e-24 Score=154.20 Aligned_cols=90 Identities=13% Similarity=0.245 Sum_probs=79.5
Q ss_pred eeEEEECCCEEEEEEecCCCCcccEEEEEEeCcEEEEEEEEece-----eeeeEEEEEEEcCCCCCcCceEEEE-eCCEE
Q 039719 74 RADWMETPTIHVITLDIPVMKKDNVKIEVEENRVLRVSGERKTE-----WTFGKFWRQFRMHMSTDLDHIKAHT-ENGIL 147 (186)
Q Consensus 74 ~vdi~e~~~~y~l~v~LPG~~~edi~V~v~~~~~L~I~g~~~~~-----~~~~~f~R~~~LP~~vd~~~i~A~~-~nGvL 147 (186)
.+||+|++++|.|.++|||++++||+|++++ +.|+|+|++... |..+.|.|+|.||.+||.++|+|+| +||+|
T Consensus 3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~-~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~nGvL 81 (101)
T 2wj5_A 3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVVG-DHVEVHARHEERPDEHGFIAREFHRRYRLPPGVDPAAVTSALSPEGVL 81 (101)
T ss_dssp CCCCCCCSSCEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEECSSTTCCEEEEEEEEEECCTTBCTTCCEEEECTTSEE
T ss_pred cEEEEEeCCEEEEEEECCCCcHHHeEEEEEC-CEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHCEEEECCCCEE
Confidence 4899999999999999999999999999998 899999998753 5667899999999999999999999 89999
Q ss_pred EEEEeccCcccCCCCeEEEe
Q 039719 148 RVTVPKLAEEKKRQPEVINI 167 (186)
Q Consensus 148 ~I~lPK~~~~~~~~~k~I~I 167 (186)
+|++||.+..+ ++.+.|
T Consensus 82 ~I~lPK~~~~~---~~~~~i 98 (101)
T 2wj5_A 82 SIQATPASAQA---SLPSPP 98 (101)
T ss_dssp EEEECBCCCCC---SSCC--
T ss_pred EEEEECCCcCC---CCCCcc
Confidence 99999987664 444444
No 9
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.89 E-value=4e-23 Score=146.09 Aligned_cols=77 Identities=17% Similarity=0.332 Sum_probs=70.7
Q ss_pred EEECCCEEEEEEecCCCCcccEEEEEEeCcEEEEEEEEece-----eeeeEEEEEEEcCCCCCcCceEEEEe-CCEEEEE
Q 039719 77 WMETPTIHVITLDIPVMKKDNVKIEVEENRVLRVSGERKTE-----WTFGKFWRQFRMHMSTDLDHIKAHTE-NGILRVT 150 (186)
Q Consensus 77 i~e~~~~y~l~v~LPG~~~edi~V~v~~~~~L~I~g~~~~~-----~~~~~f~R~~~LP~~vd~~~i~A~~~-nGvL~I~ 150 (186)
+.|++++|.|.++|||++++||+|++++ +.|+|+|++... +.+|+|.|+|.||.+||.++|+|+|+ ||+|+|+
T Consensus 2 ~~E~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~~~~~GvL~I~ 80 (85)
T 3q9p_A 2 GSHTADRWRVSLDVNHFAPDELTVKTKD-GVVEITGKHAARQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVE 80 (85)
T ss_dssp -CCCCCEEEEEEECTTTCCSEEEEEEET-TEEEEEEEEC-------CCCEEEEEEEECCTTCCGGGCEEEECTTSEEEEE
T ss_pred ccCcCCEEEEEEECCCCChHHEEEEEEC-CEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChHHcEEEECCCCEEEEE
Confidence 4589999999999999999999999999 899999998753 56799999999999999999999998 9999999
Q ss_pred Eecc
Q 039719 151 VPKL 154 (186)
Q Consensus 151 lPK~ 154 (186)
+||.
T Consensus 81 lPK~ 84 (85)
T 3q9p_A 81 APMP 84 (85)
T ss_dssp EECC
T ss_pred EEcC
Confidence 9996
No 10
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.87 E-value=8.2e-22 Score=140.58 Aligned_cols=80 Identities=20% Similarity=0.364 Sum_probs=68.0
Q ss_pred EECCCEEEEEEecCCCCcccEEEEEEeCcEEEEEEEEece-----eeeeEEEEEEEcCCCCCcCceEEEE-eCCEEEEEE
Q 039719 78 METPTIHVITLDIPVMKKDNVKIEVEENRVLRVSGERKTE-----WTFGKFWRQFRMHMSTDLDHIKAHT-ENGILRVTV 151 (186)
Q Consensus 78 ~e~~~~y~l~v~LPG~~~edi~V~v~~~~~L~I~g~~~~~-----~~~~~f~R~~~LP~~vd~~~i~A~~-~nGvL~I~l 151 (186)
.+++++|+|.++|||++++||+|++++ +.|+|+|++... |..+.|.|+|.||.+||.++|+|+| +||+|+|++
T Consensus 2 k~~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~~GvL~I~~ 80 (90)
T 2y1y_A 2 AMEKDRFSVNLDVKHFSPEELKVKVLG-DVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSMSSDGVLTVNG 80 (90)
T ss_dssp ----CCEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEEEECSSSEEEEEEEEEEECCTTBCGGGCEEEECTTSEEEEEE
T ss_pred CcCCCEEEEEEECCCCcHHHeEEEEEC-CEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEEEE
Confidence 368899999999999999999999999 899999998653 6677899999999999999999999 899999999
Q ss_pred eccCccc
Q 039719 152 PKLAEEK 158 (186)
Q Consensus 152 PK~~~~~ 158 (186)
||.+.++
T Consensus 81 pK~~~~~ 87 (90)
T 2y1y_A 81 PRKQVSG 87 (90)
T ss_dssp CBC----
T ss_pred EcCCCCC
Confidence 9987653
No 11
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.84 E-value=3.9e-21 Score=165.35 Aligned_cols=86 Identities=16% Similarity=0.196 Sum_probs=80.9
Q ss_pred ccceeEEEECCC----EEEEEEecCCCCcccEEEEEEeCcEEEEEEEEece----eeeeEEEEEEEcCCCCCcCceEEEE
Q 039719 71 ALARADWMETPT----IHVITLDIPVMKKDNVKIEVEENRVLRVSGERKTE----WTFGKFWRQFRMHMSTDLDHIKAHT 142 (186)
Q Consensus 71 ~~p~vdi~e~~~----~y~l~v~LPG~~~edi~V~v~~~~~L~I~g~~~~~----~~~~~f~R~~~LP~~vd~~~i~A~~ 142 (186)
..|++||+|+++ +|.|.++|||++++||+|++++ +.|+|+|++..+ +.+|+|.|+|.||.+||.++|+|+|
T Consensus 97 ~~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~-~~L~I~ge~~~~~e~~r~~g~F~R~~~LP~~Vd~e~i~A~~ 175 (314)
T 2bol_A 97 LDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADK-NKLVVRAQKSVACGDAAMSESVGRSIPLPPSVDRNHIQATI 175 (314)
T ss_dssp TGGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEET-TEEEEEECCBSSTTCCCBCCCEEEEEECCTTBCGGGCEEEE
T ss_pred CCCccceEEcCCCCceEEEEEEECCCCchHHeEEEEEC-CEEEEEEEEeccCCCCEEEEEEEEEEECCCCccccccEEEE
Confidence 568999999999 9999999999999999999999 899999998754 6889999999999999999999999
Q ss_pred e-CCEEEEEEeccCcc
Q 039719 143 E-NGILRVTVPKLAEE 157 (186)
Q Consensus 143 ~-nGvL~I~lPK~~~~ 157 (186)
+ ||||+|++||.+++
T Consensus 176 ~~nGVL~I~lPK~~~~ 191 (314)
T 2bol_A 176 TTDDVLVIEAPVNEPN 191 (314)
T ss_dssp CSSSEEEEEEEBSSCC
T ss_pred eCCCEEEEEEeccCcc
Confidence 9 99999999998765
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.76 E-value=1.8e-18 Score=148.68 Aligned_cols=81 Identities=17% Similarity=0.281 Sum_probs=71.0
Q ss_pred ceeEEEECC---CEEEEEEec-CCCCcccEEEEEEeCcEEEEEEEEece--------eeeeEEEEEEEcCCCCCcCceEE
Q 039719 73 ARADWMETP---TIHVITLDI-PVMKKDNVKIEVEENRVLRVSGERKTE--------WTFGKFWRQFRMHMSTDLDHIKA 140 (186)
Q Consensus 73 p~vdi~e~~---~~y~l~v~L-PG~~~edi~V~v~~~~~L~I~g~~~~~--------~~~~~f~R~~~LP~~vd~~~i~A 140 (186)
..++|.+++ ++|.|+++| ||++++||+|++++ |.|+|+|+++.+ +.+|+|+|+|.||++||.++|+|
T Consensus 221 ~~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~~-~~LtI~ge~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A 299 (314)
T 2bol_A 221 EGLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKG-NKVYVHGVTGKEEKTENASHSEHREFYKAFVTPEVVDASKTQA 299 (314)
T ss_dssp CEEEEEECTTSCEEEEEEEECCTTCCGGGEEEEESS-SEEEEEEEEC------------CEEEEEEEECSSEECGGGCEE
T ss_pred CCCcEEEecCCCcEEEEEEEcCCCCChHHeEEEEEC-CEEEEEEEEeccCCceEEEEEeeeEEEEEEECCCCcChHHeEE
Confidence 447777655 589999999 99999999999999 899999998754 58999999999999999999999
Q ss_pred EEeCCEEEEEEecc
Q 039719 141 HTENGILRVTVPKL 154 (186)
Q Consensus 141 ~~~nGvL~I~lPK~ 154 (186)
+|+||||+|++||.
T Consensus 300 ~~~dGvL~i~~Pk~ 313 (314)
T 2bol_A 300 EIVDGLMVVEAPLF 313 (314)
T ss_dssp EEETTEEEEEEEEE
T ss_pred EEeCCEEEEEEecC
Confidence 99999999999986
No 13
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.11 E-value=2.2e-10 Score=80.60 Aligned_cols=81 Identities=21% Similarity=0.202 Sum_probs=72.7
Q ss_pred cceeEEEECCCEEEEEEecCCCCcccEEEEEEeCcEEEEEEEEeceeeeeEEEEEEEcCCCCCcCceEEEEeCCEEEEEE
Q 039719 72 LARADWMETPTIHVITLDIPVMKKDNVKIEVEENRVLRVSGERKTEWTFGKFWRQFRMHMSTDLDHIKAHTENGILRVTV 151 (186)
Q Consensus 72 ~p~vdi~e~~~~y~l~v~LPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~f~R~~~LP~~vd~~~i~A~~~nGvL~I~l 151 (186)
.++++|+++++...|.+.+||+.++++.|.+.+ +.|.|++.... ...|...+.|+..|+++..++++.+|.|.|++
T Consensus 2 ~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~-~~l~v~~~~~~---~~~y~~~~~L~~~I~~~~s~~~~~~~~l~i~L 77 (92)
T 2xcm_C 2 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGE-QILSVVIEVPG---EDAYYLQPRLFGKIIPDKCKYEVLSTKIEICL 77 (92)
T ss_dssp CSEEEEEEETTEEEEEEECCSCCGGGEEEEECS-SBEEEEECCTT---SCCEEECCBBSSCBCGGGCEEEECSSCEEEEE
T ss_pred CccccEEeCCCEEEEEEEECCCChHHeEEEEEC-CEEEEEEEcCC---CcEEEEeeEcCCccCchhEEEEEECCEEEEEE
Confidence 468999999999999999999999999999999 78999976432 24688899999999999999999999999999
Q ss_pred eccCc
Q 039719 152 PKLAE 156 (186)
Q Consensus 152 PK~~~ 156 (186)
+|.++
T Consensus 78 ~K~~~ 82 (92)
T 2xcm_C 78 AKADI 82 (92)
T ss_dssp EBSSS
T ss_pred EcCCC
Confidence 99864
No 14
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.11 E-value=3.2e-10 Score=83.13 Aligned_cols=82 Identities=17% Similarity=0.207 Sum_probs=73.7
Q ss_pred ccceeEEEECCCEEEEEEecCCCCcccEEEEEEeCcEEEEEEEEeceeeeeEEEEEEEcCCCCCcCceEEEEeCCEEEEE
Q 039719 71 ALARADWMETPTIHVITLDIPVMKKDNVKIEVEENRVLRVSGERKTEWTFGKFWRQFRMHMSTDLDHIKAHTENGILRVT 150 (186)
Q Consensus 71 ~~p~vdi~e~~~~y~l~v~LPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~f~R~~~LP~~vd~~~i~A~~~nGvL~I~ 150 (186)
..++++|+++++.+.|.+.+||+++++++|.+.+ +.|.|++.... ...|...+.|+..|+++..++++.+|.|.|+
T Consensus 8 ~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~-~~l~v~~~~~~---~~~y~~~~~L~~~I~~e~s~~~~~~~~l~i~ 83 (114)
T 1rl1_A 8 SKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSE-KELSALVKLPS---GEDYNLKLELLHPIIPEQSTFKVLSTKIEIK 83 (114)
T ss_dssp CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSS-SCEEEEEECTT---SSEEEEEECBSSCCCGGGEEEEECSSSEEEE
T ss_pred CCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEc-CEEEEEEEeCC---CcEEEEEeeCCCcCCccccEEEEECCEEEEE
Confidence 4567999999999999999999999999999999 78999987532 2478899999999999999999999999999
Q ss_pred EeccCc
Q 039719 151 VPKLAE 156 (186)
Q Consensus 151 lPK~~~ 156 (186)
++|.++
T Consensus 84 L~K~~~ 89 (114)
T 1rl1_A 84 LKKPEA 89 (114)
T ss_dssp EECSSC
T ss_pred EEcCCC
Confidence 999865
No 15
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=98.43 E-value=2.2e-06 Score=63.06 Aligned_cols=80 Identities=14% Similarity=0.265 Sum_probs=70.6
Q ss_pred cccceeEEEECCCEEEEEEecCCCC--cccEEEEEEeCcEEEEEEEEeceeeeeEEEEEEEcCCCC-CcCceEEEE--eC
Q 039719 70 LALARADWMETPTIHVITLDIPVMK--KDNVKIEVEENRVLRVSGERKTEWTFGKFWRQFRMHMST-DLDHIKAHT--EN 144 (186)
Q Consensus 70 ~~~p~vdi~e~~~~y~l~v~LPG~~--~edi~V~v~~~~~L~I~g~~~~~~~~~~f~R~~~LP~~v-d~~~i~A~~--~n 144 (186)
...|...|..+++..+|.+.+|.++ ..++++.+++ +.+... ...|.-++.||..| +.+.-+|+| ++
T Consensus 15 ~iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~-~~F~F~--------~~PYyLRL~lP~~vved~~~~A~YD~d~ 85 (115)
T 3eud_A 15 MITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQE-NMIIFH--------LSPYYLRLRFPHELIDDERSTAQYDSKD 85 (115)
T ss_dssp CBCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEET-TEEEEE--------ETTEEEEEECSSCEECSTTCEEEEETTT
T ss_pred EeCCcEEEEECCCEEEEEEEcCceecccCccEEEEeC-CEEEEe--------cCCeEEEEecCcceecCCCcceEEeCCC
Confidence 4568899999999999999999977 8899999999 788887 56788899999998 878889999 58
Q ss_pred CEEEEEEeccCccc
Q 039719 145 GILRVTVPKLAEEK 158 (186)
Q Consensus 145 GvL~I~lPK~~~~~ 158 (186)
|.++|++||..+.+
T Consensus 86 g~~~v~lpK~~~GE 99 (115)
T 3eud_A 86 ECINVKVAKLNKNE 99 (115)
T ss_dssp TEEEEEEEESSTTC
T ss_pred cEEEEEEcCCcCCC
Confidence 99999999987653
No 16
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.41 E-value=3.7e-07 Score=69.15 Aligned_cols=78 Identities=14% Similarity=0.263 Sum_probs=70.1
Q ss_pred cceeEEEECCCEEEEEEecCCCC--cccEEEEEEeCcEEEEEEEEeceeeeeEEEEEEEcCCCC-CcCceEEEE--eCCE
Q 039719 72 LARADWMETPTIHVITLDIPVMK--KDNVKIEVEENRVLRVSGERKTEWTFGKFWRQFRMHMST-DLDHIKAHT--ENGI 146 (186)
Q Consensus 72 ~p~vdi~e~~~~y~l~v~LPG~~--~edi~V~v~~~~~L~I~g~~~~~~~~~~f~R~~~LP~~v-d~~~i~A~~--~nGv 146 (186)
.|...|..+++..+|.+.+|..+ .+++++.+++ ..+.+. ...|.-++.||..| +.+..+|+| +.|.
T Consensus 3 TP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~-~~F~F~--------~~PYyLRL~LP~~V~e~~~~kA~YD~d~~~ 73 (134)
T 2k8q_A 3 TPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQE-NMIIFH--------LSPYYLRLRFPHELIDDERSTAQYDSKDEC 73 (134)
T ss_dssp CSEEEEEECSSEEEEEEECCSSCCCSSSCCCEECS-SSEEEC--------SSSSCEEECCSSCEECCSSCEEEEETTTTE
T ss_pred CceEEEEECCCEEEEEEEcCccccCccccEEEEeC-CEEEEe--------cCCeEEEecCCCeeecCCCcceeEeccCCE
Confidence 47789999999999999999999 8999999999 788887 55777889999999 999999999 4899
Q ss_pred EEEEEeccCccc
Q 039719 147 LRVTVPKLAEEK 158 (186)
Q Consensus 147 L~I~lPK~~~~~ 158 (186)
|+|++||....+
T Consensus 74 ~~VtLpK~~~Ge 85 (134)
T 2k8q_A 74 INVKVAKLNKNE 85 (134)
T ss_dssp EEEEEEESSTTC
T ss_pred EEEEEeCCCCCC
Confidence 999999987654
No 17
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=98.32 E-value=1.3e-06 Score=76.43 Aligned_cols=71 Identities=15% Similarity=0.083 Sum_probs=62.0
Q ss_pred ceeEEEECCCEEEEEEecCCCCcccEEEEEEeCcEEEEEEEEeceeeeeEEEEEEEcCCCC-CcCceEEEEeCCEEEEEE
Q 039719 73 ARADWMETPTIHVITLDIPVMKKDNVKIEVEENRVLRVSGERKTEWTFGKFWRQFRMHMST-DLDHIKAHTENGILRVTV 151 (186)
Q Consensus 73 p~vdi~e~~~~y~l~v~LPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~f~R~~~LP~~v-d~~~i~A~~~nGvL~I~l 151 (186)
.++.|... .|.+++.|||+++++|++...+ +.|+|+ .|.|.|.+.||..+ ...-..|+|+||.|+|++
T Consensus 298 ~~~~i~~~--~~~~~l~lP~~~~~~~~l~~~g-deL~v~--------~g~~rR~i~LP~~L~~~~v~~A~~~~~~L~i~~ 366 (374)
T 3igf_A 298 KPITIDTH--NRQVRLFLPGFDKKQVKLTQYG-PEVTVE--------AGDQRRNIFLPPALSGRPITGAKFQNNYLIISF 366 (374)
T ss_dssp CSEEEETT--TTEEEEECTTCCGGGCEEEEET-TEEEEE--------ETTEEEEEECCTTTTTCCEEEEEEETTEEEEEE
T ss_pred CCEEEEec--cEEEEEECCCCCHHHeEEEEEC-CeEEEE--------ECCEeecccCCHHHcCCCccccEEECCEEEEEE
Confidence 34555433 8999999999999999999998 799999 89999999999997 667788999999999998
Q ss_pred ecc
Q 039719 152 PKL 154 (186)
Q Consensus 152 PK~ 154 (186)
-..
T Consensus 367 ~~~ 369 (374)
T 3igf_A 367 LEH 369 (374)
T ss_dssp CCC
T ss_pred ehh
Confidence 643
No 18
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.98 E-value=7.9e-05 Score=55.40 Aligned_cols=81 Identities=10% Similarity=0.164 Sum_probs=69.3
Q ss_pred cceeEEEECCCEEEEEEecCCC---CcccEEEEEEeCcEEEEEEEEeceeeeeEEEEEEE-cCCCCCcCceEEEEeCCEE
Q 039719 72 LARADWMETPTIHVITLDIPVM---KKDNVKIEVEENRVLRVSGERKTEWTFGKFWRQFR-MHMSTDLDHIKAHTENGIL 147 (186)
Q Consensus 72 ~p~vdi~e~~~~y~l~v~LPG~---~~edi~V~v~~~~~L~I~g~~~~~~~~~~f~R~~~-LP~~vd~~~i~A~~~nGvL 147 (186)
.+.++|+++.+...|.+.+||+ +++++.|.+.+ +.|.|++.... ...|.-.+. |-..|+++.-+....++.+
T Consensus 20 ~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~-~~l~v~~~~~~---~~~y~~~~~~L~~~I~~e~S~~~v~~~kV 95 (127)
T 1x5m_A 20 ISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTE-RSFDLLVKNLN---GKSYSMIVNNLLKPISVEGSSKKVKTDTV 95 (127)
T ss_dssp CCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECS-SEEEEEECSCS---SSCEEEEEECBSSCCCTTTCEEEEETTEE
T ss_pred ccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEc-CEEEEEEEcCC---CCcEEEEhHHhcCccCcccCEEEEeCCEE
Confidence 4579999999999999999999 89999999999 78999874322 135777785 9999999998888999999
Q ss_pred EEEEeccCc
Q 039719 148 RVTVPKLAE 156 (186)
Q Consensus 148 ~I~lPK~~~ 156 (186)
.|+|-|.++
T Consensus 96 ei~L~K~~~ 104 (127)
T 1x5m_A 96 LILCRKKVE 104 (127)
T ss_dssp EEEEECSSS
T ss_pred EEEEEECCC
Confidence 999999864
No 19
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=97.92 E-value=4.9e-05 Score=57.40 Aligned_cols=85 Identities=13% Similarity=0.178 Sum_probs=71.3
Q ss_pred ccceeEEEEC-CCEEEEEEecCCCCcccEEEEEEeCcEEEEEEEEecee------eee---EEEEEEEcCCCCCcCceEE
Q 039719 71 ALARADWMET-PTIHVITLDIPVMKKDNVKIEVEENRVLRVSGERKTEW------TFG---KFWRQFRMHMSTDLDHIKA 140 (186)
Q Consensus 71 ~~p~vdi~e~-~~~y~l~v~LPG~~~edi~V~v~~~~~L~I~g~~~~~~------~~~---~f~R~~~LP~~vd~~~i~A 140 (186)
..++++|+++ .+...|.+.++++.++++.|.+.+ +.|.|+....... ..| .|.-.+.|-..|+++.-+.
T Consensus 18 ~~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~-~~l~v~~~~~~~~~l~~~~a~g~~~~y~~~~~L~~~I~pe~S~~ 96 (134)
T 1wh0_A 18 AFVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFRE-QDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLIEPEQCTF 96 (134)
T ss_dssp SCCCEEEEEETTTEEEEEEECCSBCTTSCEEEECS-SEEEEEECBCCHHHHHHSTTCCTTSCEEEEEEBSSCEEEEEEEE
T ss_pred cCCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEEC-CEEEEEEEcCCCcccccccccCcceeEEEeccccccCCchhCEE
Confidence 4678999999 999999999999999999999999 7899986533210 112 6777789999999999888
Q ss_pred EEeCCEEEEEEeccCc
Q 039719 141 HTENGILRVTVPKLAE 156 (186)
Q Consensus 141 ~~~nGvL~I~lPK~~~ 156 (186)
+..++.+.|+|.|.+.
T Consensus 97 ~v~~~kIeI~L~K~e~ 112 (134)
T 1wh0_A 97 CFTASRIDICLRKRQS 112 (134)
T ss_dssp EECSSEEEEEEEESSS
T ss_pred EEeCCEEEEEEEECCC
Confidence 8899999999999854
No 20
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=97.80 E-value=0.00028 Score=52.11 Aligned_cols=83 Identities=14% Similarity=0.182 Sum_probs=68.1
Q ss_pred cccceeEEEECCCEEEEEEecC-CC-CcccEEEEEEeCcEEEEEEEEeceeeeeEEEEEEEcCCCCCcCceEEEEeCCE-
Q 039719 70 LALARADWMETPTIHVITLDIP-VM-KKDNVKIEVEENRVLRVSGERKTEWTFGKFWRQFRMHMSTDLDHIKAHTENGI- 146 (186)
Q Consensus 70 ~~~p~vdi~e~~~~y~l~v~LP-G~-~~edi~V~v~~~~~L~I~g~~~~~~~~~~f~R~~~LP~~vd~~~i~A~~~nGv- 146 (186)
...+.+.|+++.+...|.+.|| |+ +.+|+.|.+.. +.|.|+..... ...+.-...|...|+++.-...+++|-
T Consensus 17 ~~~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~-~~l~v~~~~~~---~~~~~~~~~L~~~I~~e~S~w~i~~~k~ 92 (124)
T 1wgv_A 17 AVRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSS-SSIRVAMLEEN---GERVLMEGKLTHKINTESSLWSLEPGKC 92 (124)
T ss_dssp BCCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECS-SEEEEEEECSS---SEEEEEEEEBSSCBCTTTCEEEECTTSE
T ss_pred CcCCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEc-CEEEEEEEccC---CCceEEcccccCcCCCcCCEEEEeCCCE
Confidence 3467899999999999999999 88 99999999999 78999865311 112345678999999999999998885
Q ss_pred EEEEEeccCc
Q 039719 147 LRVTVPKLAE 156 (186)
Q Consensus 147 L~I~lPK~~~ 156 (186)
|.|+|-|.+.
T Consensus 93 v~i~L~K~~~ 102 (124)
T 1wgv_A 93 VLVNLSKVGE 102 (124)
T ss_dssp EEEEECBSSS
T ss_pred EEEEEEECCC
Confidence 9999999853
No 21
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=97.70 E-value=0.00023 Score=52.70 Aligned_cols=79 Identities=15% Similarity=0.168 Sum_probs=67.1
Q ss_pred ceeEEEECCCEEEEEEecCCCCcccEEEEEEeCcEEEEEEEEeceeeeeEEEEEEEcCCCCCcCceEEEEeCCEEEEEEe
Q 039719 73 ARADWMETPTIHVITLDIPVMKKDNVKIEVEENRVLRVSGERKTEWTFGKFWRQFRMHMSTDLDHIKAHTENGILRVTVP 152 (186)
Q Consensus 73 p~vdi~e~~~~y~l~v~LPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~f~R~~~LP~~vd~~~i~A~~~nGvL~I~lP 152 (186)
|.++++++.+...|.+.+|+. +++.|.++. +.|.+++..... ...|.-.+.|-..|+++..+.+..++.+.|+|.
T Consensus 4 ~~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~-~~l~~~~~~~~~--~~~y~~~l~L~~~I~~e~S~~~v~~~kiei~L~ 78 (125)
T 1ejf_A 4 ASAKWYDRRDYVFIEFCVEDS--KDVNVNFEK-SKLTFSCLGGSD--NFKHLNEIDLFHCIDPNDSKHKRTDRSILCCLR 78 (125)
T ss_dssp CCEEEEECSSEEEEEECCTTE--EEEEEEEET-TEEEEEEEETTT--TEEEEEEEEBSSCEEEEEEEEEECSSCEEEEEE
T ss_pred CceeEEeCCCEEEEEEEecCC--CceEEEEEC-CEEEEEEEeCCC--CceEEEEEEccceeccccCEEEECCCEEEEEEE
Confidence 479999999999999999996 699999998 799999764211 135788899999999999998888899999999
Q ss_pred ccCc
Q 039719 153 KLAE 156 (186)
Q Consensus 153 K~~~ 156 (186)
|.++
T Consensus 79 K~~~ 82 (125)
T 1ejf_A 79 KGES 82 (125)
T ss_dssp ESST
T ss_pred ECCC
Confidence 9864
No 22
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=97.62 E-value=0.00037 Score=51.98 Aligned_cols=76 Identities=13% Similarity=0.121 Sum_probs=62.8
Q ss_pred cceeEEEECCCEEEEEEecC-CCCcccEEEEEEeCcEEEEEEEEeceeeeeEEEEEEEcCCCCCcCceEEEEeCCEEEEE
Q 039719 72 LARADWMETPTIHVITLDIP-VMKKDNVKIEVEENRVLRVSGERKTEWTFGKFWRQFRMHMSTDLDHIKAHTENGILRVT 150 (186)
Q Consensus 72 ~p~vdi~e~~~~y~l~v~LP-G~~~edi~V~v~~~~~L~I~g~~~~~~~~~~f~R~~~LP~~vd~~~i~A~~~nGvL~I~ 150 (186)
.+.+.|+.+.+...|.+.|| |++.+++.|.+.. +.|.|++. . .. .-...|...|+++.-...+++|-|.|+
T Consensus 4 ~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~-~~l~v~~~--g----~~-~~~~~L~~~I~~e~S~w~i~~~kv~i~ 75 (131)
T 2o30_A 4 EAKYTWDQELNEINIQFPVTGDADSSAIKIRMVG-KKICVKNQ--G----EI-VIDGELLHEVDVSSLWWVINGDVVDVN 75 (131)
T ss_dssp -CCCEEEEETTEEEEEEECC---CCSCEEEEEET-TEEEEEET--T----EE-EEEEEBSSCEEEEEEEEEEETTEEEEE
T ss_pred CCcEEEEecCCEEEEEEECCCCCCccceEEEEEC-CEEEEEEC--C----Ee-eEccccccccccccCEEEEeCCEEEEE
Confidence 46799999999999999996 8999999999999 78999863 1 12 345689999999998889999999999
Q ss_pred EeccC
Q 039719 151 VPKLA 155 (186)
Q Consensus 151 lPK~~ 155 (186)
+-|..
T Consensus 76 L~K~~ 80 (131)
T 2o30_A 76 VTKKR 80 (131)
T ss_dssp EEESS
T ss_pred EEECC
Confidence 99983
No 23
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=97.61 E-value=0.00076 Score=49.68 Aligned_cols=80 Identities=14% Similarity=0.216 Sum_probs=66.4
Q ss_pred cccceeEEEECCCEEEEEEecC-C--CCcccEEEEEEeCcEEEEEEEEeceeeeeEEEEEEEcCCCCCcCceEEEEeCC-
Q 039719 70 LALARADWMETPTIHVITLDIP-V--MKKDNVKIEVEENRVLRVSGERKTEWTFGKFWRQFRMHMSTDLDHIKAHTENG- 145 (186)
Q Consensus 70 ~~~p~vdi~e~~~~y~l~v~LP-G--~~~edi~V~v~~~~~L~I~g~~~~~~~~~~f~R~~~LP~~vd~~~i~A~~~nG- 145 (186)
...+.+.|..+.+...|.+.|| | ++.+||.|.+.. +.|.|..+.. .+.-...|...|+++.....+++|
T Consensus 14 ~~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~-~~l~v~~kg~------~~~~~g~L~~~I~~deS~w~i~~~~ 86 (121)
T 3qor_A 14 ADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQR-RHLRVGLKGQ------PAIIDGELYNEVKVEESSWLIADGA 86 (121)
T ss_dssp CBCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEET-TEEEEEETTS------CCSEEEEBSSCBCGGGCEEEEETTT
T ss_pred CcCCCEEEEEccceEEEEEECCCCCcccccceEEEEEc-CEEEEEEcCc------ceEEeccccccccccccEEEEcCCC
Confidence 4567899999999999999999 4 799999999999 7888874321 123356799999999999999998
Q ss_pred EEEEEEeccCc
Q 039719 146 ILRVTVPKLAE 156 (186)
Q Consensus 146 vL~I~lPK~~~ 156 (186)
.|.|+|-|...
T Consensus 87 ~i~i~L~K~~~ 97 (121)
T 3qor_A 87 VVTVHLEKINK 97 (121)
T ss_dssp EEEEEEEBSSS
T ss_pred EEEEEEEECCC
Confidence 99999999754
No 24
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=97.55 E-value=0.00022 Score=53.12 Aligned_cols=80 Identities=15% Similarity=0.208 Sum_probs=66.4
Q ss_pred cccceeEEEECCCEEEEEEecC-C--CCcccEEEEEEeCcEEEEEEEEeceeeeeEEEEEEEcCCCCCcCceEEEEeCC-
Q 039719 70 LALARADWMETPTIHVITLDIP-V--MKKDNVKIEVEENRVLRVSGERKTEWTFGKFWRQFRMHMSTDLDHIKAHTENG- 145 (186)
Q Consensus 70 ~~~p~vdi~e~~~~y~l~v~LP-G--~~~edi~V~v~~~~~L~I~g~~~~~~~~~~f~R~~~LP~~vd~~~i~A~~~nG- 145 (186)
...+.+.|+++.+...|.+.|| | ++.+++.|.+.. +.|.|+.+.. .+.-...|...|+++.-....++|
T Consensus 5 ~~~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~-~~l~v~~kg~------~~~~~~~L~~~I~~e~s~w~i~~~k 77 (131)
T 1wfi_A 5 SSGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQR-RHLRVGLKGQ------PPVVDGELYNEVKVEESSWLIEDGK 77 (131)
T ss_dssp SSCCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEET-TEEEEEETTS------CCSBCSCBSSCBCSTTCEEEEETTT
T ss_pred CCCCcEEEEecCCEEEEEEECCCCCcccccceEEEEeC-CEEEEEECCc------eEEEecccccccccccCEEEEcCCC
Confidence 3467899999999999999999 6 899999999999 7899986421 112235688899999999999998
Q ss_pred EEEEEEeccCc
Q 039719 146 ILRVTVPKLAE 156 (186)
Q Consensus 146 vL~I~lPK~~~ 156 (186)
.|.|++-|..+
T Consensus 78 ~v~i~L~K~~~ 88 (131)
T 1wfi_A 78 VVTVHLEKINK 88 (131)
T ss_dssp EEEEEEEBSSS
T ss_pred EEEEEEEECCC
Confidence 89999999864
No 25
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=97.55 E-value=0.00073 Score=52.10 Aligned_cols=78 Identities=14% Similarity=0.204 Sum_probs=66.1
Q ss_pred ccceeEEEECCCEEEEEEecC-CCCcccEEEEEEeCcEEEEEEEEeceeeeeEEEEEEEcCCCCCcCceEEEEeCCE-EE
Q 039719 71 ALARADWMETPTIHVITLDIP-VMKKDNVKIEVEENRVLRVSGERKTEWTFGKFWRQFRMHMSTDLDHIKAHTENGI-LR 148 (186)
Q Consensus 71 ~~p~vdi~e~~~~y~l~v~LP-G~~~edi~V~v~~~~~L~I~g~~~~~~~~~~f~R~~~LP~~vd~~~i~A~~~nGv-L~ 148 (186)
..+.+.|+.+.+...|.+.|| |++.++|.|.+.. +.|.|+.+.. . .-...|...|+++.-...++++- |.
T Consensus 12 ~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~-~~L~v~~kg~------~-~l~g~L~~~I~~eeS~w~i~~~k~v~ 83 (157)
T 2rh0_A 12 GTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQS-RHVALAVGGR------E-ILKGKLFDSTIADEGTWTLEDRKMVR 83 (157)
T ss_dssp ECSSEEEEECSSEEEEEEECCTTCCGGGEEEEECS-SEEEEEETTE------E-EEEEEBSSCBCGGGCEEEEECCCEEE
T ss_pred CCCcEEEEecCCEEEEEEECCCCCcccceEEEEec-CEEEEEECCE------E-EEeeccccccCccccEEEEcCCcEEE
Confidence 457899999999999999998 8999999999999 7899986411 2 24567999999999999999885 99
Q ss_pred EEEeccCc
Q 039719 149 VTVPKLAE 156 (186)
Q Consensus 149 I~lPK~~~ 156 (186)
|+|-|...
T Consensus 84 I~L~K~~~ 91 (157)
T 2rh0_A 84 IVLTKTKR 91 (157)
T ss_dssp EEEEBSSC
T ss_pred EEEEEcCC
Confidence 99999864
No 26
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=97.43 E-value=0.00034 Score=53.66 Aligned_cols=78 Identities=9% Similarity=0.126 Sum_probs=65.9
Q ss_pred cceeEEEECCCEEEEEEecCCCCcccEEEEEE-eCcEEEEEEEEeceeeeeEEEEEEEcCCCCCcCceEEEEeCCEEEEE
Q 039719 72 LARADWMETPTIHVITLDIPVMKKDNVKIEVE-ENRVLRVSGERKTEWTFGKFWRQFRMHMSTDLDHIKAHTENGILRVT 150 (186)
Q Consensus 72 ~p~vdi~e~~~~y~l~v~LPG~~~edi~V~v~-~~~~L~I~g~~~~~~~~~~f~R~~~LP~~vd~~~i~A~~~nGvL~I~ 150 (186)
.|.++|+++.+...|.+.+|++ ++++|.++ + +.|.+++.... ...|.-.+.|-..|+++ .+.+....-+.|+
T Consensus 4 ~P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~-~~l~~~~~~~~---~~~y~~~l~L~~~Idpe-S~~~v~~~kIei~ 76 (150)
T 2kmw_A 4 NPEVLWAQRSDKVYLTVALPDA--KDISVKCEPQ-GLFSFSALGAQ---GERFEFSLELYGKIMTE-YRKNVGLRNIIFS 76 (150)
T ss_dssp CCCEEEEECSSEEEEEECCSSE--EEEEECCCTT-EEEEEEEETTT---TEEEEEEEEBSSCEEEE-EEEEEESSSEEEE
T ss_pred CCcEEEEeCCCEEEEEEEeCCC--CceEEEEecC-CEEEEEEEcCC---CceEEEEeEhhhccccc-ceEEecCCEEEEE
Confidence 5789999999999999999998 57899998 6 78999987211 23678889999999999 8888888889999
Q ss_pred EeccCc
Q 039719 151 VPKLAE 156 (186)
Q Consensus 151 lPK~~~ 156 (186)
|.|.++
T Consensus 77 L~K~e~ 82 (150)
T 2kmw_A 77 IQKEER 82 (150)
T ss_dssp EEECCS
T ss_pred EEECCC
Confidence 999764
No 27
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=97.26 E-value=0.00017 Score=54.29 Aligned_cols=82 Identities=10% Similarity=0.159 Sum_probs=61.0
Q ss_pred ccceeEEEECCCE-------EEEEEecCCCCcccEEEEEEeCcEEEEEEEEecee---eeeEEEEEEEcCCCCCcCceEE
Q 039719 71 ALARADWMETPTI-------HVITLDIPVMKKDNVKIEVEENRVLRVSGERKTEW---TFGKFWRQFRMHMSTDLDHIKA 140 (186)
Q Consensus 71 ~~p~vdi~e~~~~-------y~l~v~LPG~~~edi~V~v~~~~~L~I~g~~~~~~---~~~~f~R~~~LP~~vd~~~i~A 140 (186)
..|.++|+++.+. ..|.+.+|+++ +++|.+.. +.|.+++...... ....|.-.+.|...|+++..+.
T Consensus 5 ~~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~--~~~V~~~~-~~l~~~~~~~~~~g~~~~~~y~~~l~L~~~Idpe~S~~ 81 (134)
T 2cg9_X 5 INPQVAWAQRSSTTDPERNYVLITVSIADCD--APELTIKP-SYIELKAQSKPHVGDENVHHYQLHIDLYKEIIPEKTMH 81 (134)
T ss_dssp ------CBCCCEEECCCSSEEEEECCCSSEE--SCCCCBCS-SEEEECCEEC-------CEEBCEEEECSSCCCSSSEEE
T ss_pred cCCCEEEEeCCCCcCCcCCEEEEEEEecCCC--ceEEEEEC-CEEEEEEecccccCCccCceEEEEEEChhhccccccEE
Confidence 4577888888776 99999999984 88888888 7899987653200 0136778899999999999999
Q ss_pred EEeCCE-EEEEEeccC
Q 039719 141 HTENGI-LRVTVPKLA 155 (186)
Q Consensus 141 ~~~nGv-L~I~lPK~~ 155 (186)
++.++. +.|+|.|.+
T Consensus 82 ~v~~~~~vei~L~K~~ 97 (134)
T 2cg9_X 82 KVANGQHYFLKLYKKD 97 (134)
T ss_dssp EECCC--CEEEEEECS
T ss_pred EECCCEEEEEEEEECC
Confidence 999998 999999986
No 28
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=75.49 E-value=6.9 Score=26.12 Aligned_cols=34 Identities=15% Similarity=0.320 Sum_probs=29.1
Q ss_pred eEEEEEEEcCCCCCcCceEEEEeCCEEEEEEeccC
Q 039719 121 GKFWRQFRMHMSTDLDHIKAHTENGILRVTVPKLA 155 (186)
Q Consensus 121 ~~f~R~~~LP~~vd~~~i~A~~~nGvL~I~lPK~~ 155 (186)
..|.-.+.|| .++.+.|+-.+++|.|+|..-+..
T Consensus 7 ~~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 40 (85)
T 3q9p_A 7 DRWRVSLDVN-HFAPDELTVKTKDGVVEITGKHAA 40 (85)
T ss_dssp CEEEEEEECT-TTCCSEEEEEEETTEEEEEEEEC-
T ss_pred CEEEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 4677778998 799999999999999999987654
No 29
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=72.33 E-value=13 Score=25.12 Aligned_cols=34 Identities=21% Similarity=0.318 Sum_probs=28.5
Q ss_pred EEEEEEEcCCCCCcCceEEEEeCCEEEEEEeccCc
Q 039719 122 KFWRQFRMHMSTDLDHIKAHTENGILRVTVPKLAE 156 (186)
Q Consensus 122 ~f~R~~~LP~~vd~~~i~A~~~nGvL~I~lPK~~~ 156 (186)
.|.-.+.|| .++.+.|+-.+++|.|+|..-+...
T Consensus 15 ~~~v~~~lP-G~~~edi~v~~~~~~L~I~g~~~~~ 48 (100)
T 3gla_A 15 HFVLYADLP-GIDPSQIEVQMDKGILSIRGERKSE 48 (100)
T ss_dssp EEEEEEECT-TSCGGGCEEEEETTEEEEEEEECCG
T ss_pred EEEEEEECC-CCCHHHEEEEEECCEEEEEEEEcCc
Confidence 555568899 7999999999999999999877654
No 30
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=69.77 E-value=20 Score=26.65 Aligned_cols=29 Identities=7% Similarity=0.091 Sum_probs=25.5
Q ss_pred EEEcCCCCCcCceEEEEeCCEEEEEEeccC
Q 039719 126 QFRMHMSTDLDHIKAHTENGILRVTVPKLA 155 (186)
Q Consensus 126 ~~~LP~~vd~~~i~A~~~nGvL~I~lPK~~ 155 (186)
.+.|| +++.+.|+..+++|.|+|+.-+..
T Consensus 71 ~~dlP-G~~~edi~V~~~~~~L~I~g~~~~ 99 (161)
T 4eld_A 71 IAWLP-GVNKEDIILNAVGDTLEIRAKRSP 99 (161)
T ss_dssp EEECT-TCCGGGEEEEEETTEEEEEEECCC
T ss_pred EEECC-CCChHhEEEEEECCEEEEEEEEcc
Confidence 37798 689999999999999999987765
No 31
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=67.49 E-value=7.8 Score=26.66 Aligned_cols=33 Identities=21% Similarity=0.172 Sum_probs=27.5
Q ss_pred EEEEEEecC-CCCcccEEEEEEeCcEEEEEEEEec
Q 039719 83 IHVITLDIP-VMKKDNVKIEVEENRVLRVSGERKT 116 (186)
Q Consensus 83 ~y~l~v~LP-G~~~edi~V~v~~~~~L~I~g~~~~ 116 (186)
.|.-.+.|| +++.+.++-++++ |+|+|+..+..
T Consensus 62 ~f~R~~~LP~~vd~~~i~A~~~~-GvL~I~lpK~~ 95 (102)
T 4fei_A 62 RFVRELAFPEPVRPASGVASLAG-GVLTVRFEKLR 95 (102)
T ss_dssp EEEEEEECSSCBCTTCCEEEEET-TEEEEEEEBSS
T ss_pred EEEEEEECCCCcchhHcEEEEEC-CEEEEEEEccC
Confidence 456678899 6999999999998 89999976653
No 32
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=64.86 E-value=11 Score=25.38 Aligned_cols=34 Identities=9% Similarity=0.156 Sum_probs=29.1
Q ss_pred eEEEEEEEcCCCCCcCceEEEEeCCEEEEEEeccC
Q 039719 121 GKFWRQFRMHMSTDLDHIKAHTENGILRVTVPKLA 155 (186)
Q Consensus 121 ~~f~R~~~LP~~vd~~~i~A~~~nGvL~I~lPK~~ 155 (186)
..|.-.+.|| .++.+.|+-.+.+|.|+|..-+..
T Consensus 6 ~~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 39 (90)
T 2y1y_A 6 DRFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHEE 39 (90)
T ss_dssp CCEEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred CEEEEEEECC-CCcHHHeEEEEECCEEEEEEEEec
Confidence 4567778999 899999999999999999987653
No 33
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=64.14 E-value=9.1 Score=26.80 Aligned_cols=46 Identities=28% Similarity=0.395 Sum_probs=30.6
Q ss_pred cccEEEEEEeCcEEEEEEEEeceeeeeEEEEEEEcCCCCCcCceEEEEeCCE---EEEEEec
Q 039719 95 KDNVKIEVEENRVLRVSGERKTEWTFGKFWRQFRMHMSTDLDHIKAHTENGI---LRVTVPK 153 (186)
Q Consensus 95 ~edi~V~v~~~~~L~I~g~~~~~~~~~~f~R~~~LP~~vd~~~i~A~~~nGv---L~I~lPK 153 (186)
|+.|+|++++ +.++|+|.+ |...+.|.- .. |+...+|+. |.|..+.
T Consensus 20 P~gV~V~i~~-~~VtVKGPk------G~L~~~~~h-~~-----v~i~~e~~~~~~i~v~~~~ 68 (100)
T 2cql_A 20 PENVDITLKG-RTVIVKGPR------GTLRRDFNH-IN-----VELSLLGKKKKRLRVDKWW 68 (100)
T ss_dssp CSSCEEEEET-TEEEEEETT------EEEEEECCS-SC-----CEEEEECSSSCEEEEECCS
T ss_pred CCCCEEEEeC-CEEEEECCC------ceEEEEecc-Cc-----EEEEEcCCceeEEEEEccC
Confidence 4788999998 899999874 666654431 23 445567666 6666443
No 34
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=63.16 E-value=14 Score=25.74 Aligned_cols=33 Identities=6% Similarity=0.118 Sum_probs=28.3
Q ss_pred eEEEEEEEcCCCCCcCceEEEEeCCEEEEEEecc
Q 039719 121 GKFWRQFRMHMSTDLDHIKAHTENGILRVTVPKL 154 (186)
Q Consensus 121 ~~f~R~~~LP~~vd~~~i~A~~~nGvL~I~lPK~ 154 (186)
..|.-.+.|| .++.+.|+-.+.+|.|+|.--+.
T Consensus 12 ~~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~ 44 (106)
T 3l1e_A 12 DKFVIFLDVK-HFSPEDLTVKVQEDFVEIHGKHN 44 (106)
T ss_dssp SEEEEEEECT-TSCGGGEEEEEETTEEEEEEEEE
T ss_pred CEEEEEEECC-CCChHHEEEEEECCEEEEEEEEc
Confidence 4666678898 89999999999999999998654
No 35
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=61.72 E-value=9.9 Score=29.63 Aligned_cols=45 Identities=27% Similarity=0.437 Sum_probs=32.7
Q ss_pred cccEEEEEEeCcEEEEEEEEeceeeeeEEEEEEEcCCCCCcCceEEEEeCCEEEEEEe
Q 039719 95 KDNVKIEVEENRVLRVSGERKTEWTFGKFWRQFRMHMSTDLDHIKAHTENGILRVTVP 152 (186)
Q Consensus 95 ~edi~V~v~~~~~L~I~g~~~~~~~~~~f~R~~~LP~~vd~~~i~A~~~nGvL~I~lP 152 (186)
|++++|++++ +.++|+|.+ |+..+.|.-| . ++-..+++.|.|...
T Consensus 14 P~gV~v~i~~-~~V~VkGpk------G~L~~~~~~~-~-----v~i~~~~~~l~v~~~ 58 (184)
T 3j21_F 14 PEGVEVTVEG-YKVKVKGPK------GELEREFFWP-G-----IQIFTEDGNVVIYKD 58 (184)
T ss_dssp CSSCEEEESS-SEEEEECSS------CEEEEECCCT-T-----CEEEEETTEEEEECS
T ss_pred CCCcEEEEeC-CEEEEEcCC------eEEEEEecCC-c-----EEEEEeCCEEEEEEC
Confidence 4789999988 899999874 6777665422 2 445578899888753
No 36
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=61.14 E-value=17 Score=28.91 Aligned_cols=46 Identities=17% Similarity=0.388 Sum_probs=33.9
Q ss_pred cccEEEEEEeCcEEEEEEEEeceeeeeEEEEEEEcCCCCCcCceEEEEeCCEEEEEEecc
Q 039719 95 KDNVKIEVEENRVLRVSGERKTEWTFGKFWRQFRMHMSTDLDHIKAHTENGILRVTVPKL 154 (186)
Q Consensus 95 ~edi~V~v~~~~~L~I~g~~~~~~~~~~f~R~~~LP~~vd~~~i~A~~~nGvL~I~lPK~ 154 (186)
|+.|+|++++ +.++|+|.+ |...+.| +.. +....+||.|.|..+..
T Consensus 39 P~gV~V~i~~-~~VtVKGPk------G~L~~~~--~~~-----v~i~~e~~~i~v~~~~~ 84 (212)
T 1nkw_E 39 PSGVTVNAQD-GVFKVKGPK------GELTVPY--NTE-----LTVRQDGDQLLVERPSD 84 (212)
T ss_pred CCCcEEEEeC-CEEEEECCC------EEEEEEC--CCC-----eEEEEECCEEEEEcCCC
Confidence 5788999998 899999885 6666655 433 44567899988886543
No 37
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=60.34 E-value=14 Score=25.43 Aligned_cols=34 Identities=12% Similarity=0.109 Sum_probs=28.9
Q ss_pred eEEEEEEEcCCCCCcCceEEEEeCCEEEEEEeccC
Q 039719 121 GKFWRQFRMHMSTDLDHIKAHTENGILRVTVPKLA 155 (186)
Q Consensus 121 ~~f~R~~~LP~~vd~~~i~A~~~nGvL~I~lPK~~ 155 (186)
..|.-.+.|| +++.+.|+-.+++|.|+|..-+..
T Consensus 11 ~~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~ 44 (101)
T 2wj5_A 11 GYFSVLLDVK-HFSPEEISVKVVGDHVEVHARHEE 44 (101)
T ss_dssp SCEEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred CEEEEEEECC-CCcHHHeEEEEECCEEEEEEEEec
Confidence 3566678899 899999999999999999987653
No 38
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=57.14 E-value=21 Score=25.19 Aligned_cols=33 Identities=12% Similarity=0.089 Sum_probs=27.1
Q ss_pred EEEEEEcCCCCCcCceEEEEeC-CEEEEEEeccCc
Q 039719 123 FWRQFRMHMSTDLDHIKAHTEN-GILRVTVPKLAE 156 (186)
Q Consensus 123 f~R~~~LP~~vd~~~i~A~~~n-GvL~I~lPK~~~ 156 (186)
|.-.+.|| +++.+.|+-.+.+ |.|+|+.-+...
T Consensus 36 ~~v~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~~ 69 (123)
T 3aab_A 36 LVVVADLA-GFNKEKIKARVSGQNELIIEAEREIT 69 (123)
T ss_dssp EEEEEECC-SCCGGGCEEEEETTTEEEEEEECCCC
T ss_pred EEEEEECC-CCCHHHEEEEEeCCCEEEEEEEEecc
Confidence 33447898 7999999999999 999999887653
No 39
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=54.63 E-value=20 Score=27.60 Aligned_cols=46 Identities=26% Similarity=0.450 Sum_probs=33.8
Q ss_pred cccEEEEEEeCcEEEEEEEEeceeeeeEEEEEEEcCCCCCcCceEEEEeCCEEEEEEecc
Q 039719 95 KDNVKIEVEENRVLRVSGERKTEWTFGKFWRQFRMHMSTDLDHIKAHTENGILRVTVPKL 154 (186)
Q Consensus 95 ~edi~V~v~~~~~L~I~g~~~~~~~~~~f~R~~~LP~~vd~~~i~A~~~nGvL~I~lPK~ 154 (186)
|+.|+|++++ +.++|+|.+ |...+.| +..+ ....+||.|.|..+..
T Consensus 11 P~gV~V~i~~-~~VtVkGpk------G~L~~~~--~~~v-----~i~~~~~~l~v~~~~~ 56 (177)
T 1rl6_A 11 PAGVTVTVNG-NTVTVKGPK------GELTRTF--HPDM-----TITVEGNVITVTRPSD 56 (177)
T ss_dssp CTTCEEEEET-TEEEEEETT------EEEEEEC--CTTC-----EEEEETTEEEEECSCC
T ss_pred CCCCEEEEeC-CEEEEECCC------eEEEEEc--CCCE-----EEEEeCCEEEEEcCCC
Confidence 4778999988 899999874 6766655 4443 4557899988886543
No 40
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=54.45 E-value=17 Score=26.93 Aligned_cols=32 Identities=25% Similarity=0.243 Sum_probs=26.8
Q ss_pred EEEEEEecC-CCCcccEEEEEEeCcEEEEEEEEe
Q 039719 83 IHVITLDIP-VMKKDNVKIEVEENRVLRVSGERK 115 (186)
Q Consensus 83 ~y~l~v~LP-G~~~edi~V~v~~~~~L~I~g~~~ 115 (186)
.|.-.+.|| +++.+.|+-++++ |+|+|+..+.
T Consensus 105 ~F~R~~~LP~~vd~~~i~A~~~n-GvL~I~lPK~ 137 (151)
T 1gme_A 105 KFVRRFRLLEDAKVEEVKAGLEN-GVLTVTVPKA 137 (151)
T ss_dssp CEEEEEECSSCCCGGGCEEEEET-TEEEEEEECC
T ss_pred EEEEEEECCCCccccceEEEEEC-CEEEEEEEcc
Confidence 466678898 7999999999988 8999997654
No 41
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=52.85 E-value=21 Score=27.60 Aligned_cols=47 Identities=15% Similarity=0.246 Sum_probs=33.7
Q ss_pred cccEEEEEEeCcEEEEEEEEeceeeeeEEEEEEEcCCCCCcCceEEEEeCCEEEEEEecc
Q 039719 95 KDNVKIEVEENRVLRVSGERKTEWTFGKFWRQFRMHMSTDLDHIKAHTENGILRVTVPKL 154 (186)
Q Consensus 95 ~edi~V~v~~~~~L~I~g~~~~~~~~~~f~R~~~LP~~vd~~~i~A~~~nGvL~I~lPK~ 154 (186)
|+.++|++++ +.++|+|.+ |+..+.|. +.. ++...+||.|.|..+..
T Consensus 9 P~gV~v~i~~-~~vtVkGpk------G~L~~~~~-~~~-----v~i~~~~~~i~v~~~~~ 55 (178)
T 1vq8_E 9 PEDVDAEQDH-LDITVEGDN------GSVTRRLW-YPD-----IDVSVDGDTVVIESDED 55 (178)
T ss_dssp CTTCEEEEET-TEEEEEETT------EEEEEECC-CTT-----CEEEEETTEEEEECSCC
T ss_pred CCCCEEEEeC-CEEEEECCC------eEEEEEEE-CCe-----EEEEEECCEEEEEcCCC
Confidence 4788999998 899999874 67666552 333 44557899988876543
No 42
>2nwt_A UPF0165 protein AF_2212; HOMO dimer protein, GFT structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: b.129.2.2
Probab=50.93 E-value=11 Score=24.78 Aligned_cols=17 Identities=29% Similarity=0.366 Sum_probs=13.4
Q ss_pred CceEEEEeCCEEEEEEe
Q 039719 136 DHIKAHTENGILRVTVP 152 (186)
Q Consensus 136 ~~i~A~~~nGvL~I~lP 152 (186)
..|+|.|+||||.--=|
T Consensus 3 k~IeAiYEnGVfkPLe~ 19 (69)
T 2nwt_A 3 KIIEAVYENGVFKPLQK 19 (69)
T ss_dssp CCEEEEEETTEEEESSC
T ss_pred ceEEEEEECCEEeECCc
Confidence 46999999999975433
No 43
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=50.06 E-value=23 Score=27.34 Aligned_cols=44 Identities=25% Similarity=0.441 Sum_probs=32.6
Q ss_pred cccEEEEEEeCcEEEEEEEEeceeeeeEEEEEEEcCCCCCcCceEEEEeCCEEEEEEe
Q 039719 95 KDNVKIEVEENRVLRVSGERKTEWTFGKFWRQFRMHMSTDLDHIKAHTENGILRVTVP 152 (186)
Q Consensus 95 ~edi~V~v~~~~~L~I~g~~~~~~~~~~f~R~~~LP~~vd~~~i~A~~~nGvL~I~lP 152 (186)
|++|+|++++ +.++|+|.+ |...+.| +..| +-..+++.|.|...
T Consensus 12 P~gV~v~i~~-~~v~VkGpk------G~L~~~~--~~~v-----~i~~~~~~l~v~~~ 55 (180)
T 3v2d_H 12 PKGVSVEVAP-GRVKVKGPK------GELEVPV--SPEM-----RVVVEEGVVRVERP 55 (180)
T ss_dssp CTTCEEEEET-TEEEEECSS------CEEEEEC--CTTS-----EEEEETTEEEEECS
T ss_pred CCCcEEEEeC-CEEEEEeCC------cEEEEEe--CCCE-----EEEEECCEEEEEEC
Confidence 5789999998 899999874 6666655 4343 44568999888753
No 44
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=48.17 E-value=27 Score=27.22 Aligned_cols=46 Identities=28% Similarity=0.490 Sum_probs=32.7
Q ss_pred cccEEEEEEeCcEEEEEEEEeceeeeeEEEEEEEcCCCCCcCceEEEE--eCCEEEEEEec
Q 039719 95 KDNVKIEVEENRVLRVSGERKTEWTFGKFWRQFRMHMSTDLDHIKAHT--ENGILRVTVPK 153 (186)
Q Consensus 95 ~edi~V~v~~~~~L~I~g~~~~~~~~~~f~R~~~LP~~vd~~~i~A~~--~nGvL~I~lPK 153 (186)
|++++|++++ +.++|+|.+ |...+.|. +.. ++-.+ +++.|.|..+-
T Consensus 13 P~gV~v~i~~-~~V~VkGPk------G~L~~~~~-~~~-----v~i~~~~~~~~l~v~~~~ 60 (190)
T 3iz5_F 13 PEGVTVQVAA-KVVTVEGPR------GKLTRNFK-HLN-----LDFQLLEGGRKLQVDAWF 60 (190)
T ss_dssp CTTCEEEEET-TEEEEEETT------EEEEEECC-CTT-----EEEEEETTTTEEEEEESC
T ss_pred CCCCEEEEeC-CEEEEECCC------ceEEEEcc-CCc-----EEEEEEcCCCEEEEEECC
Confidence 5789999998 899999874 66666543 122 44456 78888888653
No 45
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=48.05 E-value=25 Score=24.33 Aligned_cols=35 Identities=6% Similarity=0.067 Sum_probs=30.4
Q ss_pred CCEEEEEEecCC-CCcccEEEEEEeCcEEEEEEEEec
Q 039719 81 PTIHVITLDIPV-MKKDNVKIEVEENRVLRVSGERKT 116 (186)
Q Consensus 81 ~~~y~l~v~LPG-~~~edi~V~v~~~~~L~I~g~~~~ 116 (186)
+..|.+.++|++ +++++....+.+ +.|.|.-.+..
T Consensus 53 ~~~y~~~~~L~~~I~~e~s~~~~~~-~~l~i~L~K~~ 88 (114)
T 1rl1_A 53 GEDYNLKLELLHPIIPEQSTFKVLS-TKIEIKLKKPE 88 (114)
T ss_dssp SSEEEEEECBSSCCCGGGEEEEECS-SSEEEEEECSS
T ss_pred CcEEEEEeeCCCcCCccccEEEEEC-CEEEEEEEcCC
Confidence 568999999997 799999999998 78999887765
No 46
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=46.42 E-value=32 Score=26.81 Aligned_cols=46 Identities=20% Similarity=0.515 Sum_probs=32.5
Q ss_pred cccEEEEEEeCcEEEEEEEEeceeeeeEEEEEEEcCCCCCcCceEEE-EeCCEEEEEEec
Q 039719 95 KDNVKIEVEENRVLRVSGERKTEWTFGKFWRQFRMHMSTDLDHIKAH-TENGILRVTVPK 153 (186)
Q Consensus 95 ~edi~V~v~~~~~L~I~g~~~~~~~~~~f~R~~~LP~~vd~~~i~A~-~~nGvL~I~lPK 153 (186)
|++++|++++ +.++|+|.+ |...+.|.- ..| +-. .++|.|.|..+-
T Consensus 13 P~gV~v~i~~-~~V~VkGPk------G~L~~~~~~-~~v-----~i~~~~~~~l~v~~~~ 59 (191)
T 3u5e_H 13 PEGVTVSIKS-RIVKVVGPR------GTLTKNLKH-IDV-----TFTKVNNQLIKVAVHN 59 (191)
T ss_dssp CTTCEEEEET-TEEEEEETT------EEEEEECTT-TCC-----EEEEEETTEEEEEEEE
T ss_pred CCCcEEEEeC-CEEEEEcCC------eEEEEEccC-CcE-----EEEEecCCeEEEEECC
Confidence 5789999998 899999874 677765431 133 334 468999988653
No 47
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=42.34 E-value=34 Score=26.10 Aligned_cols=33 Identities=9% Similarity=0.160 Sum_probs=27.4
Q ss_pred EEEEEEEcCCCCCcCceEEEEeCCEEEEEEeccC
Q 039719 122 KFWRQFRMHMSTDLDHIKAHTENGILRVTVPKLA 155 (186)
Q Consensus 122 ~f~R~~~LP~~vd~~~i~A~~~nGvL~I~lPK~~ 155 (186)
.|.-.+.|| +++.+.|+.++.+|.|+|.--+.+
T Consensus 74 ~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~ 106 (175)
T 2klr_A 74 RFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHEE 106 (175)
T ss_dssp EEEEEECCS-SCCGGGEEEEEETTEEEEEEEEEE
T ss_pred eEEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 455558898 899999999999999999986643
No 48
>4a17_E RPL9, 60S ribosomal protein L9; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_E 4a1c_E 4a1e_E
Probab=39.74 E-value=20 Score=27.89 Aligned_cols=46 Identities=28% Similarity=0.453 Sum_probs=31.5
Q ss_pred CcccEEEEEEeCcEEEEEEEEeceeeeeEEEEEEEcCCCCCcCceEEEE-eCCEEEEEEe
Q 039719 94 KKDNVKIEVEENRVLRVSGERKTEWTFGKFWRQFRMHMSTDLDHIKAHT-ENGILRVTVP 152 (186)
Q Consensus 94 ~~edi~V~v~~~~~L~I~g~~~~~~~~~~f~R~~~LP~~vd~~~i~A~~-~nGvL~I~lP 152 (186)
=|++++|++++ +.++|+|.+ |...|.|.- ..|+.+ . +++.|.|..+
T Consensus 12 IP~gV~v~i~~-~~V~VkGPk------G~L~~~~~~-~~v~i~-----~~~~~~l~v~~~ 58 (188)
T 4a17_E 12 IPDKVTITAKQ-RVVEVKGPL------GTIKRAFRY-ASVDIQ-----KPTADNVKLQIW 58 (188)
T ss_dssp CCTTCEEEEET-TEEEEEETT------EEEEEECTT-SCCEEC-----CCBTTBCEEEEE
T ss_pred CCCCcEEEEeC-CEEEEEcCC------eEEEEEccC-CeEEEE-----EccCCeEEEEEC
Confidence 36889999998 899999874 666665531 134332 3 5787877754
No 49
>3bbo_I Ribosomal protein L6; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=32.87 E-value=14 Score=29.67 Aligned_cols=46 Identities=30% Similarity=0.459 Sum_probs=32.1
Q ss_pred cccEEEEEEeCcEEEEEEEEeceeeeeEEEEEEEcCCCCCcCceEEEEeCCEEEEEEec
Q 039719 95 KDNVKIEVEENRVLRVSGERKTEWTFGKFWRQFRMHMSTDLDHIKAHTENGILRVTVPK 153 (186)
Q Consensus 95 ~edi~V~v~~~~~L~I~g~~~~~~~~~~f~R~~~LP~~vd~~~i~A~~~nGvL~I~lPK 153 (186)
|++|+|++++ +.++|+|.+ |...+.| +..|+.. ..+||.|.|..+.
T Consensus 54 P~gV~V~i~~-~~VtVKGPk------G~L~~~~--~~~v~i~----~~e~~~i~v~~~~ 99 (223)
T 3bbo_I 54 PSNVTIALEG-QDLKVKGPL------GELALTY--PREVELT----KEESGFLRVKKTV 99 (223)
T ss_dssp STTSCEEESS-SEEEECCSS------CCEEEEC--CSSCEEE----ECSSSCEEEECSS
T ss_pred CCCCEEEEeC-CEEEEECCC------eEEEEEc--CCCEEEE----EecCCEEEEEcCC
Confidence 5778899988 899999875 5666544 5554331 4578888887654
No 50
>2zkr_e 60S ribosomal protein L9; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=32.10 E-value=47 Score=25.86 Aligned_cols=51 Identities=27% Similarity=0.297 Sum_probs=34.4
Q ss_pred CCCCcccEEEEEEeCcEEEEEEEEeceeeeeEEEEEEEcCCCCCcCceEEEEeCCE---EEEEEecc
Q 039719 91 PVMKKDNVKIEVEENRVLRVSGERKTEWTFGKFWRQFRMHMSTDLDHIKAHTENGI---LRVTVPKL 154 (186)
Q Consensus 91 PG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~f~R~~~LP~~vd~~~i~A~~~nGv---L~I~lPK~ 154 (186)
|=-=|+.|+|++++ +.++|+|.+ |...+.| +.. .+....+||. |.|..+..
T Consensus 9 pI~IP~gV~V~i~~-~~VtVkGpk------G~L~~~~--~~~----~v~i~~~~~~~~~i~v~~~~~ 62 (192)
T 2zkr_e 9 TVDIPENVDITLKG-RTVIVKGPR------GTLRRDF--NHI----NVELSLLGKKKKRLRVDKWWG 62 (192)
T ss_dssp -CCCCTTCEEEEET-TEEEEEETT------EEEEEEC--CSS----SCEEEEETTTTCEEEEECSCC
T ss_pred cEEcCCCCEEEEeC-CEEEEECCC------eEEEEEe--CCC----CEEEEEecCceeEEEEEcCCC
Confidence 33346788999998 899999874 6666554 431 2445678888 88775543
No 51
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=30.81 E-value=32 Score=24.18 Aligned_cols=16 Identities=25% Similarity=0.526 Sum_probs=14.2
Q ss_pred ceEEEEeCCEEEEEEe
Q 039719 137 HIKAHTENGILRVTVP 152 (186)
Q Consensus 137 ~i~A~~~nGvL~I~lP 152 (186)
.+.+.+.+|||+|+++
T Consensus 29 d~D~e~~~gVLti~f~ 44 (106)
T 1ew4_A 29 DIDCEINGGVLTITFE 44 (106)
T ss_dssp CCEEEEETTEEEEECT
T ss_pred CEeeeccCCEEEEEEC
Confidence 3789999999999996
No 52
>3jx8_A Putative lipoprotein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.16A {Parabacteroides distasonis atcc 8503}
Probab=30.52 E-value=1.9e+02 Score=22.52 Aligned_cols=41 Identities=15% Similarity=0.152 Sum_probs=29.5
Q ss_pred eeEEEECCCEEEEEEecCCCCcccEEEEEEeCcEEEEEEEEe
Q 039719 74 RADWMETPTIHVITLDIPVMKKDNVKIEVEENRVLRVSGERK 115 (186)
Q Consensus 74 ~vdi~e~~~~y~l~v~LPG~~~edi~V~v~~~~~L~I~g~~~ 115 (186)
.+.+...++.+.|+++-+.--.+.|++++++ +.|.|.-+..
T Consensus 33 ~V~l~qgd~~~~V~i~~~~nl~~~i~~~v~~-g~L~I~~~~~ 73 (250)
T 3jx8_A 33 DFEYEQSDKAPYLSVTIDENLFDYLVTEVEG-GTLKIYPKSI 73 (250)
T ss_dssp EEEEEECSSCCEEEEEEEGGGGGGEEEEEET-TEEEEEECBC
T ss_pred EEEEEECCCCceEEEEECccccceEEEEEEC-CEEEEEEcCC
Confidence 3555555456667777665556789999999 8999997754
No 53
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=30.08 E-value=86 Score=22.14 Aligned_cols=37 Identities=16% Similarity=0.147 Sum_probs=27.3
Q ss_pred EEECCCEEEEEEec-CCCCcccEEEEEEeCcEEEEEEEEe
Q 039719 77 WMETPTIHVITLDI-PVMKKDNVKIEVEENRVLRVSGERK 115 (186)
Q Consensus 77 i~e~~~~y~l~v~L-PG~~~edi~V~v~~~~~L~I~g~~~ 115 (186)
+.++++.+.|.+.+ ||.+++.|. .+.+ +.|.|+-.-.
T Consensus 8 ~~~~~~~v~l~v~V~P~A~r~~I~-g~~~-~~LkV~v~Ap 45 (108)
T 1n91_A 8 VTVNDDGLVLRLYIQPKASRDSIV-GLHG-DEVKVAITAP 45 (108)
T ss_dssp EEECSSEEEEEEEEECSSSSCEEE-EECS-SCEEEECCCC
T ss_pred EEECCCeEEEEEEEeeCCCcceee-cccC-CEEEEEEecC
Confidence 46778888888888 899998873 4566 6788775433
No 54
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=29.59 E-value=36 Score=24.75 Aligned_cols=15 Identities=13% Similarity=0.516 Sum_probs=13.8
Q ss_pred eEEEEeCCEEEEEEe
Q 039719 138 IKAHTENGILRVTVP 152 (186)
Q Consensus 138 i~A~~~nGvL~I~lP 152 (186)
+.+.+.+|||+|+++
T Consensus 49 ~Dve~~~gVLti~f~ 63 (123)
T 3oeq_A 49 PDVELSHGVMTLEIP 63 (123)
T ss_dssp CEEEECSSEEEEECT
T ss_pred eEEEccCCEEEEEEC
Confidence 788999999999997
No 55
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=28.34 E-value=78 Score=22.51 Aligned_cols=31 Identities=19% Similarity=0.105 Sum_probs=23.0
Q ss_pred EEEEEEEcCCCCCcCceEEEEeCCEEEEEEe
Q 039719 122 KFWRQFRMHMSTDLDHIKAHTENGILRVTVP 152 (186)
Q Consensus 122 ~f~R~~~LP~~vd~~~i~A~~~nGvL~I~lP 152 (186)
...-+|.||.+++.+.+...+...-|.|.+.
T Consensus 15 ~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~ 45 (131)
T 2o30_A 15 EINIQFPVTGDADSSAIKIRMVGKKICVKNQ 45 (131)
T ss_dssp EEEEEEECC---CCSCEEEEEETTEEEEEET
T ss_pred EEEEEEECCCCCCccceEEEEECCEEEEEEC
Confidence 3445688999999999999999999999873
No 56
>3r8s_G 50S ribosomal protein L6; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_E 1p86_E 2awb_G 2aw4_G 2i2v_G 2j28_G 2i2t_G* 2qao_G* 2qba_G* 2qbc_G* 2qbe_G 2qbg_G 2qbi_G* 2qbk_G* 2qov_G 2qox_G 2qoz_G* 2qp1_G* 2rdo_G 2vhm_G ...
Probab=27.85 E-value=20 Score=27.57 Aligned_cols=42 Identities=14% Similarity=0.410 Sum_probs=30.8
Q ss_pred cccEEEEEEeCcEEEEEEEEeceeeeeEEEEEEEcCCCCCcCceEEEEeCCEEEEE
Q 039719 95 KDNVKIEVEENRVLRVSGERKTEWTFGKFWRQFRMHMSTDLDHIKAHTENGILRVT 150 (186)
Q Consensus 95 ~edi~V~v~~~~~L~I~g~~~~~~~~~~f~R~~~LP~~vd~~~i~A~~~nGvL~I~ 150 (186)
|++|+|++++ +.++|+|.+ |...+.| +.. ++-..+++.|+|.
T Consensus 11 P~gV~v~i~~-~~V~VkGpk------G~L~~~~--~~~-----v~i~~~~~~l~v~ 52 (176)
T 3r8s_G 11 PAGVDVKING-QVITIKGKN------GELTRTL--NDA-----VEVKHADNTLTFG 52 (176)
T ss_dssp CTTCCCEESS-SEEECCBTT------BCCEEEC--CSS-----CEEEEETTEEEEE
T ss_pred CCCcEEEEeC-CEEEEEcCC------EEEEEEC--CCC-----EEEEEeCCEEEEE
Confidence 5788899988 899999875 5666554 443 4455788998887
No 57
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=27.63 E-value=35 Score=22.40 Aligned_cols=22 Identities=23% Similarity=0.465 Sum_probs=17.6
Q ss_pred CCCcccEEEEEEeCcEEEEEEEE
Q 039719 92 VMKKDNVKIEVEENRVLRVSGER 114 (186)
Q Consensus 92 G~~~edi~V~v~~~~~L~I~g~~ 114 (186)
-|+.+.|.+.... |.|.|+|+.
T Consensus 17 sFd~e~i~L~T~~-G~L~IkG~~ 38 (71)
T 2ks0_A 17 SFDPKEILLETIQ-GVLSIKGEK 38 (71)
T ss_dssp EECSSEEEEEETT-EEEEEEEEC
T ss_pred EECCCEEEEEeCc-eEEEEEcCC
Confidence 3677888888888 789999874
No 58
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=24.32 E-value=54 Score=23.60 Aligned_cols=61 Identities=11% Similarity=0.135 Sum_probs=41.1
Q ss_pred cCCCCcccEEEEEEeCcEEEEEEEEece-------------eeee-EEEEEEEcCCCCC----------------cCceE
Q 039719 90 IPVMKKDNVKIEVEENRVLRVSGERKTE-------------WTFG-KFWRQFRMHMSTD----------------LDHIK 139 (186)
Q Consensus 90 LPG~~~edi~V~v~~~~~L~I~g~~~~~-------------~~~~-~f~R~~~LP~~vd----------------~~~i~ 139 (186)
-|..++-.|.|.+++ +.++++|+-... .... ...-.+.+-.... ...++
T Consensus 2 ~~~~~p~~i~V~v~~-G~VTLsG~Vp~~~~k~aa~~a~~~v~Gv~~~V~d~i~V~~~~~p~~~~a~~~aL~~~~~l~~i~ 80 (132)
T 2kgs_A 2 ASALSLSLLSISRSG-NTVTLIGDFPDEAAKAALMTALNGLLAPGVNVIDQIHVDPVVRSLDFSSAEPVFTASVPIPDFG 80 (132)
T ss_dssp CCCCCEEEEEEEECS-SEEEEEEEESCHHHHHHHHHHHHTTCCTTCEEEECCEECTTCCCCCGGGCHHHHHHHTTCTTCE
T ss_pred CCcccceeEEEEEEC-CEEEEEEECCCHHHHHHHHHHHHHhcCCCcceEEeEEEcCCCCCccHHHHHHHHHhcCcCCceE
Confidence 467788889999999 899999998764 1333 4554554421111 23667
Q ss_pred EEEeCCEEEEEE
Q 039719 140 AHTENGILRVTV 151 (186)
Q Consensus 140 A~~~nGvL~I~l 151 (186)
.+.++|.++|+=
T Consensus 81 V~V~~g~VtLsG 92 (132)
T 2kgs_A 81 LKVERDTVTLTG 92 (132)
T ss_dssp EEEEETEEEEEC
T ss_pred EEEECCEEEEEE
Confidence 778888877763
No 59
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A*
Probab=24.10 E-value=97 Score=25.11 Aligned_cols=15 Identities=13% Similarity=0.344 Sum_probs=12.3
Q ss_pred eeeeEEEEEEEcCCC
Q 039719 118 WTFGKFWRQFRMHMS 132 (186)
Q Consensus 118 ~~~~~f~R~~~LP~~ 132 (186)
+.+|.|+-++.||..
T Consensus 60 ~~yG~~Ear~Klp~g 74 (274)
T 2uwa_A 60 YRSGYFGANIKLQSG 74 (274)
T ss_dssp EEEEEEEEEEECCCS
T ss_pred EeeEEEEEEEEeCCC
Confidence 568999999999864
No 60
>1pyv_A ATP synthase beta chain, mitochondrial precursor; hydrolase; NMR {Nicotiana plumbaginifolia} SCOP: j.36.4.1
Probab=22.97 E-value=33 Score=20.62 Aligned_cols=11 Identities=45% Similarity=0.604 Sum_probs=8.9
Q ss_pred CCcchhHHHHH
Q 039719 1 MAKPRILAMTM 11 (186)
Q Consensus 1 ~~~~~~~~~~~ 11 (186)
|++.||+|++|
T Consensus 1 masrrllasll 11 (54)
T 1pyv_A 1 MASRRLLASLL 11 (54)
T ss_dssp -CCSHHHHHHH
T ss_pred CchHHHHHHHH
Confidence 78999999887
No 61
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=21.53 E-value=2e+02 Score=22.82 Aligned_cols=61 Identities=13% Similarity=0.198 Sum_probs=39.3
Q ss_pred ecCCCCcccEEEEEEe-CcEEEEEEEEece----eeeeEEEEEEEcCCCCCcCceEEEEeCCEEEEE
Q 039719 89 DIPVMKKDNVKIEVEE-NRVLRVSGERKTE----WTFGKFWRQFRMHMSTDLDHIKAHTENGILRVT 150 (186)
Q Consensus 89 ~LPG~~~edi~V~v~~-~~~L~I~g~~~~~----~~~~~f~R~~~LP~~vd~~~i~A~~~nGvL~I~ 150 (186)
.|||+..+==-+.+.. ++.|-+....... -..|...|+++|...-|.+.|... .+|.+.|.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~-~~g~~~vs 86 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLETIEYI-GDNQFVIS 86 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEEEEEEC-STTEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChHHeEEe-CCCEEEEE
Confidence 4899987533466652 3566654443322 133889999999877788888653 67766554
No 62
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=21.15 E-value=2.2e+02 Score=20.67 Aligned_cols=29 Identities=28% Similarity=0.425 Sum_probs=12.8
Q ss_pred eEEEE-eCCEEEEEEeccCcccCCCCeEEEecc
Q 039719 138 IKAHT-ENGILRVTVPKLAEEKKRQPEVINIDE 169 (186)
Q Consensus 138 i~A~~-~nGvL~I~lPK~~~~~~~~~k~I~I~~ 169 (186)
+.-.+ .||+|+|+.--.... +...|.|..
T Consensus 85 Vtf~iD~nGiL~V~a~d~~tg---~~~~i~I~~ 114 (152)
T 3h0x_A 85 VTFALDANGILKVSATDKGTG---KSESITITN 114 (152)
T ss_dssp EEEEECTTSEEEEEEEETTTC---CEEEEEEEC
T ss_pred EEEEEcCCCEEEEEEEEcCCC---cEeEEEEec
Confidence 34444 355555555433222 234555554
No 63
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=20.22 E-value=63 Score=23.55 Aligned_cols=17 Identities=18% Similarity=0.352 Sum_probs=14.6
Q ss_pred CceEEEEeCCEEEEEEe
Q 039719 136 DHIKAHTENGILRVTVP 152 (186)
Q Consensus 136 ~~i~A~~~nGvL~I~lP 152 (186)
..+.+.+.+|||+|+++
T Consensus 40 ~d~D~e~~~gVLti~f~ 56 (129)
T 3t3l_A 40 EDYDVSFGSGVLTVKLG 56 (129)
T ss_dssp TTCEEEEETTEEEEECC
T ss_pred cceeeecCCCEEEEEEc
Confidence 45778899999999996
Done!