Query 039720
Match_columns 973
No_of_seqs 814 out of 6473
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 21:54:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039720.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039720hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 7.3E-83 2.5E-87 789.9 40.6 598 14-624 6-749 (768)
2 3rgz_A Protein brassinosteroid 100.0 4.4E-65 1.5E-69 630.8 32.3 518 62-590 100-743 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 9E-61 3.1E-65 586.9 34.1 564 50-616 4-627 (680)
4 4eco_A Uncharacterized protein 100.0 1.3E-60 4.3E-65 577.3 21.4 501 15-592 25-604 (636)
5 3t6q_A CD180 antigen; protein- 100.0 3.5E-57 1.2E-61 547.5 32.6 494 87-616 34-565 (606)
6 1ziw_A TOLL-like receptor 3; i 100.0 6.3E-56 2.2E-60 543.9 39.8 533 66-609 8-595 (680)
7 4ecn_A Leucine-rich repeat pro 100.0 4.4E-57 1.5E-61 554.0 27.1 487 10-564 259-864 (876)
8 3vq2_A TLR4, TOLL-like recepto 100.0 1.9E-56 6.5E-61 541.1 29.1 529 67-617 16-564 (606)
9 3vq2_A TLR4, TOLL-like recepto 100.0 1.1E-55 3.7E-60 534.4 30.0 527 48-593 5-563 (606)
10 3j0a_A TOLL-like receptor 5; m 100.0 4.9E-55 1.7E-59 546.4 35.6 519 50-616 14-565 (844)
11 3t6q_A CD180 antigen; protein- 100.0 8.6E-53 2.9E-57 509.1 30.9 478 94-610 20-535 (606)
12 2z81_A CD282 antigen, TOLL-lik 100.0 1.6E-52 5.4E-57 500.6 24.9 498 49-593 3-515 (549)
13 3j0a_A TOLL-like receptor 5; m 100.0 4.8E-51 1.6E-55 510.4 34.2 498 67-611 9-539 (844)
14 2z63_A TOLL-like receptor 4, v 100.0 1.4E-50 4.7E-55 486.2 29.1 506 68-594 13-537 (570)
15 2z63_A TOLL-like receptor 4, v 100.0 3.4E-50 1.2E-54 482.9 30.2 510 88-616 9-536 (570)
16 4aoj_A High affinity nerve gro 100.0 2.2E-50 7.4E-55 442.6 18.7 263 674-972 41-324 (329)
17 4asz_A BDNF/NT-3 growth factor 100.0 1.1E-50 3.8E-55 438.7 14.8 258 674-964 13-289 (299)
18 4fih_A Serine/threonine-protei 100.0 1.1E-49 3.9E-54 435.6 20.5 251 674-958 74-324 (346)
19 4ecn_A Leucine-rich repeat pro 100.0 1.5E-49 5.1E-54 487.4 22.8 462 86-615 323-870 (876)
20 4g8a_A TOLL-like receptor 4; l 100.0 1.4E-48 4.9E-53 475.0 31.0 561 35-616 8-585 (635)
21 4b9d_A Serine/threonine-protei 100.0 7.6E-50 2.6E-54 437.7 16.9 250 674-958 24-277 (350)
22 3omv_A RAF proto-oncogene seri 100.0 1.7E-49 6E-54 429.0 19.4 262 673-966 35-302 (307)
23 4g3f_A NF-kappa-beta-inducing 100.0 1.5E-49 5E-54 433.5 18.1 258 673-963 57-315 (336)
24 2z81_A CD282 antigen, TOLL-lik 100.0 2.4E-49 8.2E-54 473.1 21.4 491 87-615 6-514 (549)
25 4eco_A Uncharacterized protein 100.0 5.5E-50 1.9E-54 484.3 15.8 473 86-615 81-604 (636)
26 3fpq_A Serine/threonine-protei 100.0 5.5E-49 1.9E-53 422.0 21.7 250 677-958 29-283 (290)
27 4gt4_A Tyrosine-protein kinase 100.0 1.6E-49 5.6E-54 431.4 16.3 258 674-964 26-306 (308)
28 4aw0_A HPDK1, 3-phosphoinositi 100.0 1E-49 3.6E-54 429.2 14.4 249 674-956 32-283 (311)
29 3hyh_A Carbon catabolite-derep 100.0 8.8E-49 3E-53 416.5 18.4 247 674-958 13-263 (275)
30 2z7x_B TOLL-like receptor 1, v 100.0 4.6E-49 1.6E-53 467.1 17.8 454 67-592 5-485 (520)
31 4fie_A Serine/threonine-protei 100.0 1.8E-48 6.2E-53 436.6 21.2 252 673-958 150-401 (423)
32 2z7x_B TOLL-like receptor 1, v 100.0 7.9E-49 2.7E-53 465.1 17.7 464 89-616 3-486 (520)
33 3ubd_A Ribosomal protein S6 ki 100.0 8.5E-49 2.9E-53 422.5 11.7 264 674-973 24-304 (304)
34 3hmm_A TGF-beta receptor type- 100.0 5.3E-48 1.8E-52 421.0 17.7 274 674-964 3-297 (303)
35 4ase_A Vascular endothelial gr 100.0 9.8E-48 3.3E-52 424.8 16.0 266 667-963 57-346 (353)
36 4g31_A Eukaryotic translation 100.0 6.8E-47 2.3E-51 409.9 18.4 261 674-958 5-280 (299)
37 4g8a_A TOLL-like receptor 4; l 100.0 2.6E-46 8.7E-51 455.2 23.9 522 54-592 35-584 (635)
38 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 3.2E-46 1.1E-50 446.5 19.1 461 65-591 34-513 (562)
39 4b99_A Mitogen-activated prote 100.0 5.1E-45 1.8E-49 410.4 18.7 276 674-958 54-345 (398)
40 1ogq_A PGIP-2, polygalacturona 100.0 4.7E-44 1.6E-48 393.8 20.9 293 16-314 2-302 (313)
41 1jl5_A Outer protein YOPM; leu 100.0 1E-43 3.5E-48 410.6 21.8 423 78-611 3-429 (454)
42 3v5w_A G-protein coupled recep 100.0 9.2E-44 3.1E-48 415.4 20.7 251 673-958 188-450 (689)
43 4f9c_A Cell division cycle 7-r 100.0 8.3E-44 2.8E-48 396.4 18.5 208 672-892 19-252 (361)
44 3uto_A Twitchin; kinase, muscl 100.0 7E-43 2.4E-47 412.8 19.4 253 673-958 156-411 (573)
45 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.5E-42 5.2E-47 414.7 20.9 437 62-568 52-514 (562)
46 3v47_A TOLL-like receptor 5B a 100.0 6E-42 2E-46 399.0 24.6 355 86-471 30-412 (455)
47 1jl5_A Outer protein YOPM; leu 100.0 9.9E-42 3.4E-46 394.0 21.9 399 108-612 9-410 (454)
48 3v47_A TOLL-like receptor 5B a 100.0 5.1E-41 1.8E-45 391.1 27.4 381 161-615 13-412 (455)
49 3fxz_A Serine/threonine-protei 100.0 9.2E-41 3.1E-45 365.1 21.7 252 673-958 19-270 (297)
50 3s95_A LIMK-1, LIM domain kina 100.0 1.4E-40 4.9E-45 366.4 21.7 272 673-969 9-287 (310)
51 3uim_A Brassinosteroid insensi 100.0 1.1E-40 3.6E-45 370.3 19.7 286 659-962 15-309 (326)
52 3p86_A Serine/threonine-protei 100.0 8.9E-41 3E-45 367.1 18.1 264 672-971 35-305 (309)
53 2qkw_B Protein kinase; three-h 100.0 2.2E-40 7.5E-45 366.8 20.8 278 668-965 33-316 (321)
54 3fe3_A MAP/microtubule affinit 100.0 1.5E-40 5E-45 367.9 19.3 249 673-958 14-265 (328)
55 1o6l_A RAC-beta serine/threoni 100.0 3.9E-40 1.3E-44 365.4 20.6 250 673-958 4-261 (337)
56 3zgw_A Maternal embryonic leuc 100.0 1.5E-40 5.2E-45 369.7 17.3 254 672-960 8-263 (347)
57 3soc_A Activin receptor type-2 100.0 2.3E-40 8E-45 366.5 17.1 282 673-965 23-319 (322)
58 4eqm_A Protein kinase; transfe 100.0 3.7E-40 1.3E-44 359.8 18.2 262 673-964 10-275 (294)
59 3ugc_A Tyrosine-protein kinase 100.0 5.9E-41 2E-45 366.7 11.7 281 673-968 9-295 (295)
60 3bz5_A Internalin-J, INLJ; leu 100.0 6E-39 2.1E-43 371.1 28.7 193 77-316 33-225 (457)
61 3q4u_A Activin receptor type-1 100.0 2.2E-39 7.6E-44 355.3 23.0 268 673-962 7-300 (301)
62 2yab_A Death-associated protei 100.0 1.3E-39 4.5E-44 364.6 20.9 252 673-957 11-272 (361)
63 2psq_A Fibroblast growth facto 100.0 1.2E-39 4.1E-44 367.4 20.1 260 673-965 80-365 (370)
64 4euu_A Serine/threonine-protei 100.0 4E-39 1.4E-43 356.3 23.7 276 673-963 8-308 (319)
65 2c30_A Serine/threonine-protei 100.0 4.9E-39 1.7E-43 355.4 23.9 262 663-958 24-295 (321)
66 3kul_A Ephrin type-A receptor 100.0 6.9E-40 2.4E-44 362.9 16.5 263 673-967 48-316 (325)
67 3tki_A Serine/threonine-protei 100.0 9.5E-40 3.3E-44 361.3 17.3 255 673-958 6-262 (323)
68 1tki_A Titin; serine kinase, m 100.0 2.1E-39 7.2E-44 358.1 19.4 253 673-959 4-259 (321)
69 2y0a_A Death-associated protei 100.0 3.6E-39 1.2E-43 357.3 21.3 253 673-958 10-272 (326)
70 3h4j_B AMPK kdaid, SNF1-like p 100.0 2E-39 6.8E-44 359.3 19.1 249 673-959 8-260 (336)
71 2nru_A Interleukin-1 receptor- 100.0 2.1E-38 7E-43 348.6 27.0 281 660-964 11-306 (307)
72 3bz5_A Internalin-J, INLJ; leu 100.0 1.1E-38 3.9E-43 368.7 26.1 368 94-594 26-393 (457)
73 3txo_A PKC-L, NPKC-ETA, protei 100.0 5.2E-40 1.8E-44 366.9 14.1 249 673-957 22-280 (353)
74 4fr4_A YANK1, serine/threonine 100.0 5.1E-39 1.8E-43 361.7 22.0 251 673-957 14-271 (384)
75 4dc2_A Protein kinase C IOTA t 100.0 2.9E-39 1E-43 364.8 19.8 255 673-958 51-319 (396)
76 3soa_A Calcium/calmodulin-depe 100.0 5.9E-39 2E-43 368.7 22.7 256 671-958 8-268 (444)
77 2bdw_A Hypothetical protein K1 100.0 5.6E-39 1.9E-43 360.6 21.3 254 672-958 27-285 (362)
78 3vhe_A Vascular endothelial gr 100.0 1.3E-39 4.4E-44 366.8 16.1 269 665-964 13-355 (359)
79 3o0g_A Cell division protein k 100.0 5E-39 1.7E-43 350.8 20.2 269 674-958 2-283 (292)
80 3sxs_A Cytoplasmic tyrosine-pr 100.0 2.5E-39 8.5E-44 348.5 17.3 257 673-965 7-265 (268)
81 3lb7_A RAF proto-oncogene seri 100.0 4.1E-39 1.4E-43 353.7 19.2 262 673-966 35-302 (307)
82 2w4o_A Calcium/calmodulin-depe 100.0 3.5E-39 1.2E-43 360.7 19.0 253 672-958 51-306 (349)
83 1fot_A TPK1 delta, CAMP-depend 100.0 4.1E-39 1.4E-43 354.6 19.1 247 673-958 5-259 (318)
84 3c0i_A Peripheral plasma membr 100.0 3.5E-39 1.2E-43 361.2 18.6 253 673-958 23-287 (351)
85 3gni_B Strad alpha; kinase fol 100.0 8.7E-39 3E-43 363.9 22.1 276 673-958 24-334 (389)
86 3g2f_A Bone morphogenetic prot 100.0 2.1E-39 7E-44 361.5 16.6 285 673-966 12-320 (336)
87 3a8x_A Protein kinase C IOTA t 100.0 8.8E-39 3E-43 356.3 21.2 255 673-958 8-276 (345)
88 3cbl_A C-FES, proto-oncogene t 100.0 6.6E-40 2.3E-44 370.9 12.1 260 673-965 113-375 (377)
89 2i0e_A Protein kinase C-beta I 100.0 3.1E-39 1E-43 360.4 17.0 250 673-958 19-277 (353)
90 1xjd_A Protein kinase C, theta 100.0 1.8E-39 6.3E-44 361.0 15.1 251 671-957 14-269 (345)
91 3g33_A Cell division protein k 100.0 1E-38 3.4E-43 351.3 20.6 273 672-958 7-297 (308)
92 4hcu_A Tyrosine-protein kinase 100.0 2.8E-39 9.4E-44 348.4 15.5 256 673-964 9-266 (269)
93 1kob_A Twitchin; kinase, intra 100.0 1E-38 3.5E-43 360.6 20.8 253 673-958 50-305 (387)
94 2qol_A Ephrin receptor; recept 100.0 2.4E-39 8.1E-44 365.2 15.3 260 673-964 44-309 (373)
95 2eva_A TAK1 kinase - TAB1 chim 100.0 9.8E-39 3.3E-43 350.9 19.6 258 673-969 7-268 (307)
96 4f0f_A Serine/threonine-protei 100.0 1E-38 3.5E-43 347.5 19.4 253 673-962 18-287 (287)
97 1rdq_E PKA C-alpha, CAMP-depen 100.0 6.1E-39 2.1E-43 358.0 18.0 247 673-958 40-294 (350)
98 3poz_A Epidermal growth factor 100.0 4.5E-39 1.5E-43 357.0 16.8 258 673-964 14-278 (327)
99 3uc3_A Serine/threonine-protei 100.0 1.2E-38 4.2E-43 357.9 20.3 255 673-959 19-276 (361)
100 3ork_A Serine/threonine protei 100.0 1.8E-39 6.1E-44 357.7 13.1 265 673-962 11-279 (311)
101 4fvq_A Tyrosine-protein kinase 100.0 2.3E-39 7.8E-44 353.0 13.8 258 673-970 7-281 (289)
102 3op5_A Serine/threonine-protei 100.0 8E-39 2.7E-43 360.6 18.7 279 673-966 34-331 (364)
103 4aw2_A Serine/threonine-protei 100.0 3.4E-39 1.2E-43 369.2 15.7 262 667-958 67-339 (437)
104 3l9p_A Anaplastic lymphoma kin 100.0 2.6E-39 9E-44 364.4 14.4 259 673-964 70-345 (367)
105 1luf_A Muscle-specific tyrosin 100.0 4.4E-39 1.5E-43 359.9 15.7 264 672-968 45-339 (343)
106 1k9a_A Carboxyl-terminal SRC k 100.0 1.3E-38 4.5E-43 368.6 19.7 251 673-964 192-445 (450)
107 3niz_A Rhodanese family protei 100.0 2.2E-38 7.4E-43 348.7 20.3 267 673-958 20-301 (311)
108 2izr_A Casein kinase I isoform 100.0 1.6E-38 5.4E-43 353.3 19.4 267 673-964 8-281 (330)
109 2wqm_A Serine/threonine-protei 100.0 2.6E-38 9E-43 348.3 21.0 266 673-970 31-303 (310)
110 3gen_A Tyrosine-protein kinase 100.0 7.5E-39 2.6E-43 347.7 16.3 256 673-964 23-280 (283)
111 2vd5_A DMPK protein; serine/th 100.0 4.4E-39 1.5E-43 365.7 14.8 262 666-958 53-328 (412)
112 3i6u_A CDS1, serine/threonine- 100.0 1.3E-38 4.6E-43 364.9 18.9 254 672-958 133-400 (419)
113 3f3z_A Calcium/calmodulin-depe 100.0 2.5E-38 8.4E-43 342.5 19.8 253 672-958 7-262 (277)
114 1csn_A Casein kinase-1; phosph 100.0 4.2E-38 1.4E-42 344.5 21.8 269 673-967 9-286 (298)
115 1mp8_A Focal adhesion kinase 1 100.0 7.6E-39 2.6E-43 347.3 15.6 257 673-964 14-276 (281)
116 2v62_A Serine/threonine-protei 100.0 1.2E-38 4.2E-43 356.2 17.6 277 673-964 36-328 (345)
117 2buj_A Serine/threonine-protei 100.0 1.6E-38 5.6E-43 351.2 18.3 276 673-969 28-311 (317)
118 3qup_A Tyrosine-protein kinase 100.0 7.2E-39 2.5E-43 355.0 15.4 264 673-964 22-298 (323)
119 4eut_A Serine/threonine-protei 100.0 1.4E-38 4.9E-43 362.4 18.3 277 673-964 8-309 (396)
120 1o6v_A Internalin A; bacterial 100.0 1.2E-37 4.2E-42 363.1 26.3 190 84-315 44-233 (466)
121 2pmi_A Negative RE, cyclin-dep 100.0 6.5E-38 2.2E-42 346.0 22.7 268 673-958 4-294 (317)
122 3kex_A Receptor tyrosine-prote 100.0 5.6E-39 1.9E-43 355.9 14.0 257 674-964 13-276 (325)
123 2ivs_A Proto-oncogene tyrosine 100.0 1.2E-38 3.9E-43 351.9 16.5 258 673-963 22-310 (314)
124 3qd2_B Eukaryotic translation 100.0 2E-38 6.7E-43 352.9 18.5 263 672-958 4-326 (332)
125 2a2a_A Death-associated protei 100.0 4.7E-38 1.6E-42 348.0 21.3 253 673-958 11-273 (321)
126 3ttj_A Mitogen-activated prote 100.0 3.7E-38 1.2E-42 365.2 21.3 270 673-958 61-356 (464)
127 2zv2_A Calcium/calmodulin-depe 100.0 1.4E-38 4.7E-43 348.4 16.7 253 673-958 12-293 (298)
128 2eue_A Carbon catabolite derep 100.0 1.7E-38 5.8E-43 343.4 17.2 247 674-958 13-263 (275)
129 3kfa_A Tyrosine-protein kinase 100.0 1.5E-38 5.2E-43 346.2 16.8 257 672-963 11-270 (288)
130 3tt0_A Basic fibroblast growth 100.0 2.1E-38 7.3E-43 359.3 18.7 262 673-967 68-355 (382)
131 3kn6_A Ribosomal protein S6 ki 100.0 1.8E-38 6.1E-43 351.4 17.6 254 675-958 9-271 (325)
132 2r5t_A Serine/threonine-protei 100.0 7.3E-39 2.5E-43 359.9 14.6 246 673-954 37-286 (373)
133 3dtc_A Mitogen-activated prote 100.0 1.1E-38 3.8E-43 344.0 15.4 251 673-962 6-271 (271)
134 1t4h_A Serine/threonine-protei 100.0 7.9E-38 2.7E-42 340.9 22.2 253 674-958 26-283 (290)
135 3dls_A PAS domain-containing s 100.0 1.2E-38 4.3E-43 354.1 16.1 244 672-958 22-275 (335)
136 2y94_A 5'-AMP-activated protei 100.0 2.3E-38 8E-43 366.0 19.0 248 674-958 16-267 (476)
137 3v8s_A RHO-associated protein 100.0 6.2E-39 2.1E-43 364.3 13.8 261 667-959 62-331 (410)
138 1nxk_A MAP kinase-activated pr 100.0 5.6E-38 1.9E-42 357.3 21.7 258 673-960 60-324 (400)
139 3rp9_A Mitogen-activated prote 100.0 4.1E-38 1.4E-42 366.2 20.8 207 673-883 52-280 (458)
140 2acx_A G protein-coupled recep 100.0 3.4E-38 1.1E-42 369.0 20.1 253 673-958 183-445 (576)
141 4ejn_A RAC-alpha serine/threon 100.0 8.7E-39 3E-43 370.3 14.9 250 673-958 147-405 (446)
142 1qcf_A Haematopoetic cell kina 100.0 1E-38 3.6E-43 370.1 15.6 256 673-965 187-445 (454)
143 3kk8_A Calcium/calmodulin depe 100.0 6.9E-38 2.4E-42 340.3 21.1 253 673-958 5-262 (284)
144 4agu_A Cyclin-dependent kinase 100.0 3.3E-38 1.1E-42 347.7 18.8 268 674-958 3-285 (311)
145 3og7_A AKAP9-BRAF fusion prote 100.0 2.2E-38 7.4E-43 345.1 17.1 260 673-964 23-288 (289)
146 2x4f_A Myosin light chain kina 100.0 3.7E-38 1.3E-42 355.2 19.4 246 679-957 94-342 (373)
147 3a62_A Ribosomal protein S6 ki 100.0 2.8E-38 9.7E-43 350.3 18.1 250 673-958 16-277 (327)
148 1opk_A P150, C-ABL, proto-onco 100.0 1.4E-38 4.8E-43 372.5 16.4 256 673-963 219-477 (495)
149 3fdn_A Serine/threonine-protei 100.0 2.9E-38 1E-42 342.3 17.7 249 673-959 8-259 (279)
150 1rjb_A FL cytokine receptor; k 100.0 2.7E-38 9.3E-43 353.7 18.0 263 672-966 43-336 (344)
151 3lxl_A Tyrosine-protein kinase 100.0 4.8E-39 1.6E-43 357.0 11.7 278 673-965 22-304 (327)
152 2h34_A Serine/threonine-protei 100.0 4E-38 1.4E-42 346.5 18.9 263 672-966 32-298 (309)
153 1o6v_A Internalin A; bacterial 100.0 3E-37 1E-41 359.8 27.3 348 156-591 44-391 (466)
154 3mdy_A Bone morphogenetic prot 100.0 3.4E-37 1.2E-41 343.7 26.4 277 670-965 33-332 (337)
155 1t46_A HOMO sapiens V-KIT hard 100.0 2.9E-38 1E-42 348.4 17.6 260 673-964 22-307 (313)
156 1ob3_A PFPK5, cell division co 100.0 3.7E-38 1.3E-42 343.1 18.0 266 674-958 2-281 (288)
157 2id5_A Lingo-1, leucine rich r 100.0 4E-38 1.4E-42 368.9 19.5 348 186-617 15-362 (477)
158 3brb_A Proto-oncogene tyrosine 100.0 2.7E-38 9.3E-43 348.7 17.1 267 672-966 32-310 (313)
159 2qr7_A Ribosomal protein S6 ki 100.0 3.3E-38 1.1E-42 351.2 17.8 255 672-959 20-279 (342)
160 2ac3_A MAP kinase-interacting 100.0 5.8E-38 2E-42 346.6 19.5 274 673-958 11-296 (316)
161 3kmu_A ILK, integrin-linked ki 100.0 1.8E-38 6E-43 342.3 15.0 253 673-964 9-270 (271)
162 2yex_A Serine/threonine-protei 100.0 7.1E-38 2.4E-42 338.7 19.8 255 673-958 6-262 (276)
163 3cc6_A Protein tyrosine kinase 100.0 2.9E-38 9.8E-43 342.8 16.5 257 673-964 11-273 (281)
164 3uzp_A CKI-delta, CKID, casein 100.0 1.5E-37 5E-42 339.9 21.7 271 673-968 8-284 (296)
165 3hko_A Calcium/calmodulin-depe 100.0 6.3E-38 2.1E-42 350.9 19.0 262 669-958 21-331 (345)
166 3f66_A Hepatocyte growth facto 100.0 5.3E-38 1.8E-42 343.8 17.9 268 673-970 24-297 (298)
167 3lzb_A Epidermal growth factor 100.0 2.3E-38 7.8E-43 351.1 15.1 258 673-964 14-278 (327)
168 4hgt_A Casein kinase I isoform 100.0 1.5E-37 5.3E-42 339.7 21.4 271 672-967 7-283 (296)
169 2xir_A Vascular endothelial gr 100.0 3.4E-38 1.2E-42 348.4 16.1 267 667-964 20-310 (316)
170 3lxp_A Non-receptor tyrosine-p 100.0 6.2E-39 2.1E-43 354.4 10.0 279 675-970 31-316 (318)
171 3p1a_A MYT1 kinase, membrane-a 100.0 5.7E-38 2E-42 345.5 17.6 245 674-958 57-305 (311)
172 3ll6_A Cyclin G-associated kin 100.0 7.8E-38 2.7E-42 348.9 18.9 271 673-969 27-313 (337)
173 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.9E-38 9.9E-43 350.8 15.1 271 671-958 31-319 (329)
174 4e5w_A Tyrosine-protein kinase 100.0 2.9E-38 1E-42 346.6 14.9 272 674-963 21-301 (302)
175 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.3E-37 4.5E-42 363.5 21.3 253 673-957 184-448 (543)
176 3bhy_A Death-associated protei 100.0 1.6E-37 5.4E-42 337.3 20.5 258 673-963 4-273 (283)
177 1qpc_A LCK kinase; alpha beta 100.0 3.8E-38 1.3E-42 341.4 15.4 260 672-968 11-273 (279)
178 3is5_A Calcium-dependent prote 100.0 1.2E-37 4.2E-42 338.4 19.5 251 673-958 21-279 (285)
179 3t9t_A Tyrosine-protein kinase 100.0 3.1E-38 1.1E-42 339.7 14.6 256 673-964 7-264 (267)
180 2vgo_A Serine/threonine-protei 100.0 1.3E-37 4.3E-42 338.3 19.5 256 673-966 13-273 (284)
181 2w1i_A JAK2; chromosomal rearr 100.0 1.2E-38 4.1E-43 353.6 11.6 277 673-968 40-326 (326)
182 4aaa_A Cyclin-dependent kinase 100.0 5.3E-38 1.8E-42 349.2 16.8 269 673-958 24-307 (331)
183 3cok_A Serine/threonine-protei 100.0 9.9E-38 3.4E-42 337.9 18.6 250 673-958 10-263 (278)
184 3oz6_A Mitogen-activated prote 100.0 1.2E-37 4.2E-42 354.1 20.1 278 672-958 7-329 (388)
185 2jam_A Calcium/calmodulin-depe 100.0 1.3E-37 4.4E-42 341.7 19.7 253 672-958 7-262 (304)
186 3pls_A Macrophage-stimulating 100.0 1.3E-37 4.3E-42 340.8 19.4 268 675-971 22-294 (298)
187 2rku_A Serine/threonine-protei 100.0 8.7E-38 3E-42 341.4 18.1 251 673-959 14-267 (294)
188 3c1x_A Hepatocyte growth facto 100.0 3.1E-38 1E-42 355.6 14.9 266 674-969 89-360 (373)
189 2pvf_A Fibroblast growth facto 100.0 5.9E-38 2E-42 349.2 16.8 260 673-965 34-319 (334)
190 2ycf_A Serine/threonine-protei 100.0 1E-37 3.4E-42 345.6 18.4 253 672-957 8-274 (322)
191 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 4.5E-38 1.6E-42 364.2 16.3 257 673-966 183-442 (452)
192 1xbb_A Tyrosine-protein kinase 100.0 3.7E-38 1.3E-42 343.7 14.6 258 673-963 15-278 (291)
193 3llt_A Serine/threonine kinase 100.0 6.2E-37 2.1E-41 344.9 24.9 272 664-957 25-355 (360)
194 2a19_B Interferon-induced, dou 100.0 4.5E-38 1.6E-42 341.7 14.9 254 672-965 9-275 (284)
195 2owb_A Serine/threonine-protei 100.0 9.5E-38 3.3E-42 347.5 17.6 250 673-958 40-292 (335)
196 3gxj_A TGF-beta receptor type- 100.0 5.9E-39 2E-43 352.2 7.4 272 673-966 2-299 (303)
197 1byg_A CSK, protein (C-termina 100.0 4.2E-38 1.4E-42 340.9 13.9 251 673-964 20-273 (278)
198 3mwu_A Calmodulin-domain prote 100.0 2.8E-37 9.5E-42 361.7 21.9 253 672-958 20-277 (486)
199 2w5a_A Serine/threonine-protei 100.0 3.8E-38 1.3E-42 341.4 13.6 257 673-962 5-272 (279)
200 1b6c_B TGF-B superfamily recep 100.0 8.6E-37 2.9E-41 341.2 24.9 277 667-965 35-337 (342)
201 3n9x_A Phosphotransferase; mal 100.0 1.3E-37 4.5E-42 358.4 18.8 212 673-888 25-253 (432)
202 2jii_A Serine/threonine-protei 100.0 7.1E-38 2.4E-42 351.2 16.1 272 673-967 41-339 (352)
203 2y7j_A Phosphorylase B kinase 100.0 3.5E-37 1.2E-41 346.7 21.6 258 668-958 88-360 (365)
204 3eqc_A Dual specificity mitoge 100.0 4.9E-38 1.7E-42 353.9 14.6 266 673-958 32-325 (360)
205 3dbq_A Dual specificity protei 100.0 1.3E-37 4.6E-42 347.6 17.9 253 673-959 8-275 (343)
206 1u5q_A Serine/threonine protei 100.0 1E-37 3.6E-42 348.2 17.0 249 673-960 53-308 (348)
207 1u59_A Tyrosine-protein kinase 100.0 1.1E-37 3.9E-42 339.2 16.9 263 674-969 9-277 (287)
208 3nsz_A CK II alpha, casein kin 100.0 4.3E-37 1.5E-41 341.9 21.8 265 673-958 35-320 (330)
209 3oja_B Anopheles plasmodium-re 100.0 5.4E-37 1.8E-41 368.6 24.4 317 157-621 74-390 (597)
210 1mqb_A Ephrin type-A receptor 100.0 1.2E-37 4.2E-42 346.2 17.4 258 674-963 44-308 (333)
211 3pfq_A PKC-B, PKC-beta, protei 100.0 1.6E-37 5.3E-42 375.5 19.6 250 672-957 339-597 (674)
212 2i1m_A Macrophage colony-stimu 100.0 1E-37 3.4E-42 347.4 16.4 259 673-963 45-325 (333)
213 2h6d_A 5'-AMP-activated protei 100.0 2.4E-37 8.4E-42 334.5 18.2 249 673-958 10-262 (276)
214 3lij_A Calcium/calmodulin depe 100.0 3.3E-37 1.1E-41 361.6 20.8 252 673-958 36-292 (494)
215 3nyv_A Calmodulin-domain prote 100.0 2E-37 6.9E-42 363.1 18.9 252 673-958 25-282 (484)
216 1cm8_A Phosphorylated MAP kina 100.0 2.5E-37 8.6E-42 348.0 18.5 269 673-958 24-308 (367)
217 3mtl_A Cell division protein k 100.0 6.5E-38 2.2E-42 347.1 13.4 274 674-965 2-291 (324)
218 1fvr_A Tyrosine-protein kinase 100.0 1E-37 3.5E-42 346.3 14.8 264 659-965 17-301 (327)
219 4fl3_A Tyrosine-protein kinase 100.0 1.2E-37 4.2E-42 373.7 16.6 251 680-963 375-630 (635)
220 1ua2_A CAK, cell division prot 100.0 2.9E-37 9.8E-42 345.3 18.4 271 671-959 7-293 (346)
221 2id5_A Lingo-1, leucine rich r 100.0 1.7E-36 5.7E-41 355.0 25.6 320 161-540 14-333 (477)
222 2zmd_A Dual specificity protei 100.0 3.1E-37 1.1E-41 350.0 18.8 251 674-958 56-321 (390)
223 3eb0_A Putative uncharacterize 100.0 1.6E-37 5.4E-42 352.4 16.4 270 670-957 3-321 (383)
224 1p4o_A Insulin-like growth fac 100.0 4.8E-38 1.6E-42 348.2 11.7 262 670-964 21-299 (322)
225 3mi9_A Cell division protein k 100.0 9.2E-37 3.1E-41 342.2 22.3 277 673-958 16-312 (351)
226 3byv_A Rhoptry kinase; malaria 100.0 1.8E-38 6.2E-43 359.4 8.4 251 673-963 72-367 (377)
227 2clq_A Mitogen-activated prote 100.0 4.9E-37 1.7E-41 335.6 19.4 251 675-958 23-279 (295)
228 3a7i_A MST3 kinase, serine/thr 100.0 4.3E-37 1.5E-41 337.4 18.8 251 673-959 21-272 (303)
229 3lm5_A Serine/threonine-protei 100.0 2.5E-37 8.5E-42 343.0 17.1 257 669-958 23-288 (327)
230 3q60_A ROP5B; pseudokinase, tr 100.0 1.4E-37 4.7E-42 351.5 15.2 259 673-957 61-352 (371)
231 1x8b_A WEE1HU, WEE1-like prote 100.0 3.6E-37 1.2E-41 335.3 18.0 245 672-958 9-280 (289)
232 1vzo_A Ribosomal protein S6 ki 100.0 2.2E-37 7.7E-42 347.1 16.5 256 673-959 53-323 (355)
233 2xrw_A Mitogen-activated prote 100.0 1E-36 3.5E-41 344.1 21.7 268 673-959 24-320 (371)
234 2yfx_A Tyrosine-protein kinase 100.0 2.1E-37 7.2E-42 343.8 15.8 258 673-963 29-303 (327)
235 3q5i_A Protein kinase; CDPK, m 100.0 5.9E-37 2E-41 360.5 20.4 252 673-958 35-302 (504)
236 3o6n_A APL1; leucine-rich repe 100.0 1.1E-36 3.9E-41 346.6 22.2 236 39-316 2-239 (390)
237 1phk_A Phosphorylase kinase; g 100.0 1E-36 3.5E-41 333.6 20.6 253 672-957 15-283 (298)
238 2j7t_A Serine/threonine-protei 100.0 1.6E-37 5.6E-42 340.6 14.3 253 672-957 17-275 (302)
239 2ozo_A Tyrosine-protein kinase 100.0 2.8E-37 9.7E-42 369.8 16.9 255 676-963 337-597 (613)
240 3qyz_A Mitogen-activated prote 100.0 5E-37 1.7E-41 345.9 17.9 275 673-958 26-314 (364)
241 3com_A Serine/threonine-protei 100.0 1E-36 3.5E-41 336.2 20.0 252 672-958 27-279 (314)
242 2h8h_A Proto-oncogene tyrosine 100.0 1.6E-37 5.3E-42 366.9 13.9 257 673-966 266-525 (535)
243 3kvw_A DYRK2, dual specificity 100.0 6.8E-37 2.3E-41 351.7 18.7 198 673-891 96-303 (429)
244 3fme_A Dual specificity mitoge 100.0 4.4E-37 1.5E-41 335.1 16.2 251 673-957 6-266 (290)
245 1wak_A Serine/threonine-protei 100.0 9.3E-37 3.2E-41 348.4 19.6 270 673-958 36-392 (397)
246 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3.8E-37 1.3E-41 347.1 15.9 251 672-963 63-338 (365)
247 2r3i_A Cell division protein k 100.0 1.4E-36 4.6E-41 332.8 19.6 266 674-957 3-283 (299)
248 2vwi_A Serine/threonine-protei 100.0 1.6E-37 5.6E-42 340.7 12.1 266 672-958 13-288 (303)
249 3sv0_A Casein kinase I-like; t 100.0 1.6E-36 5.4E-41 351.3 20.8 266 673-963 6-277 (483)
250 2fst_X Mitogen-activated prote 100.0 2.6E-37 8.8E-42 347.5 13.7 268 674-958 29-312 (367)
251 3pg1_A Mitogen-activated prote 100.0 6.6E-37 2.3E-41 345.0 16.6 278 666-958 14-317 (362)
252 3an0_A Dual specificity mitoge 100.0 8.2E-37 2.8E-41 341.1 17.1 252 673-958 50-311 (340)
253 2x7f_A TRAF2 and NCK-interacti 100.0 3.2E-37 1.1E-41 342.3 13.5 259 670-958 20-287 (326)
254 2pml_X PFPK7, Ser/Thr protein 100.0 5.4E-37 1.9E-41 343.7 15.4 264 673-958 30-323 (348)
255 3e3p_A Protein kinase, putativ 100.0 1.6E-36 5.3E-41 341.7 19.1 277 667-958 16-315 (360)
256 2wtk_C Serine/threonine-protei 100.0 3.4E-36 1.2E-40 330.6 21.0 254 672-958 3-264 (305)
257 2b9h_A MAP kinase FUS3, mitoge 100.0 1.3E-36 4.4E-41 341.4 18.0 280 673-958 10-306 (353)
258 2i6l_A Mitogen-activated prote 100.0 2.4E-36 8.2E-41 334.2 19.6 274 673-958 10-306 (320)
259 1blx_A Cyclin-dependent kinase 100.0 2.6E-36 8.9E-41 334.9 19.6 273 672-958 9-297 (326)
260 1u46_A ACK-1, activated CDC42 100.0 4.4E-37 1.5E-41 335.2 13.1 260 673-964 17-284 (291)
261 2wei_A Calmodulin-domain prote 100.0 3.5E-36 1.2E-40 327.4 20.1 253 672-958 20-277 (287)
262 4fcg_A Uncharacterized protein 100.0 9.9E-37 3.4E-41 337.4 15.9 270 15-290 22-312 (328)
263 1j1b_A Glycogen synthase kinas 100.0 1.2E-36 4E-41 348.9 17.0 266 674-958 54-337 (420)
264 1z57_A Dual specificity protei 100.0 3E-36 1E-40 336.3 17.7 264 673-958 13-329 (339)
265 1zy4_A Serine/threonine-protei 100.0 3.2E-36 1.1E-40 330.3 17.4 265 672-958 4-284 (303)
266 4e7w_A Glycogen synthase kinas 100.0 3.7E-36 1.3E-40 341.9 18.0 267 674-958 40-322 (394)
267 3rgf_A Cyclin-dependent kinase 100.0 3.3E-36 1.1E-40 344.3 17.3 273 674-960 20-336 (405)
268 3fhr_A MAP kinase-activated pr 100.0 4.2E-36 1.4E-40 334.2 17.5 257 673-959 27-289 (336)
269 4exu_A Mitogen-activated prote 100.0 2.7E-36 9.1E-41 340.7 16.2 268 673-958 41-324 (371)
270 3o6n_A APL1; leucine-rich repe 100.0 1.2E-35 4.2E-40 338.1 21.2 336 158-617 45-380 (390)
271 2j0j_A Focal adhesion kinase 1 100.0 2.8E-36 9.5E-41 363.4 16.0 257 673-964 389-651 (656)
272 2vx3_A Dual specificity tyrosi 100.0 1.4E-35 4.9E-40 336.2 20.9 201 672-891 52-262 (382)
273 3a99_A Proto-oncogene serine/t 100.0 2.1E-36 7E-41 334.5 12.0 243 672-958 41-294 (320)
274 3aln_A Dual specificity mitoge 100.0 6.6E-36 2.3E-40 331.8 15.9 255 673-958 21-286 (327)
275 1q8y_A SR protein kinase; tran 100.0 6.5E-36 2.2E-40 338.4 16.1 270 673-958 18-334 (373)
276 2iwi_A Serine/threonine-protei 100.0 3.3E-36 1.1E-40 331.9 12.3 246 669-958 26-284 (312)
277 3cek_A Dual specificity protei 100.0 1.7E-35 6E-40 326.2 18.0 253 673-959 27-294 (313)
278 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.4E-36 4.9E-41 335.9 9.2 261 673-966 32-304 (319)
279 3coi_A Mitogen-activated prote 100.0 1.5E-35 5E-40 332.6 16.8 268 673-958 23-306 (353)
280 1ogq_A PGIP-2, polygalacturona 100.0 6.4E-36 2.2E-40 328.9 13.1 257 359-617 51-310 (313)
281 3qa8_A MGC80376 protein; kinas 100.0 2E-35 6.7E-40 348.5 17.8 274 673-962 13-307 (676)
282 2eu9_A Dual specificity protei 100.0 2.6E-35 9E-40 330.9 17.8 264 673-958 18-334 (355)
283 2dyl_A Dual specificity mitoge 100.0 3.2E-35 1.1E-39 324.9 17.3 252 673-958 24-284 (318)
284 2rio_A Serine/threonine-protei 100.0 7.4E-35 2.5E-39 335.4 18.5 252 674-957 15-295 (434)
285 3oja_B Anopheles plasmodium-re 100.0 1.4E-34 4.8E-39 347.6 19.7 314 205-616 50-363 (597)
286 3uqc_A Probable conserved tran 100.0 1.5E-34 5.1E-39 313.5 17.6 233 674-965 31-266 (286)
287 4fmz_A Internalin; leucine ric 100.0 1.8E-33 6.2E-38 314.9 25.1 306 83-467 41-346 (347)
288 3p23_A Serine/threonine-protei 100.0 3.6E-34 1.2E-38 328.6 17.7 249 674-957 24-283 (432)
289 2ft3_A Biglycan; proteoglycan, 100.0 4.3E-33 1.5E-37 309.6 23.5 218 87-315 34-253 (332)
290 4fmz_A Internalin; leucine ric 100.0 6.4E-33 2.2E-37 310.5 25.0 305 156-588 42-346 (347)
291 2pzi_A Probable serine/threoni 100.0 5.4E-34 1.8E-38 347.2 17.0 244 674-962 80-326 (681)
292 3m2w_A MAP kinase-activated pr 100.0 2.4E-33 8.3E-38 306.8 20.1 233 674-958 17-257 (299)
293 1xku_A Decorin; proteoglycan, 100.0 1.3E-32 4.4E-37 305.6 25.7 200 86-316 52-253 (330)
294 2ft3_A Biglycan; proteoglycan, 100.0 2.8E-32 9.7E-37 303.0 25.1 295 158-538 33-331 (332)
295 3dzo_A Rhoptry kinase domain; 100.0 9.7E-34 3.3E-38 323.9 13.1 245 673-957 77-363 (413)
296 1xku_A Decorin; proteoglycan, 100.0 6.2E-32 2.1E-36 300.1 25.6 296 158-538 31-330 (330)
297 2vuw_A Serine/threonine-protei 100.0 9.6E-33 3.3E-37 307.4 14.4 247 673-956 19-329 (336)
298 1z7x_W Ribonuclease inhibitor; 100.0 7.6E-35 2.6E-39 339.6 -8.9 362 158-565 3-412 (461)
299 1z7x_W Ribonuclease inhibitor; 100.0 1.4E-34 4.8E-39 337.4 -9.3 359 88-468 5-412 (461)
300 4fcg_A Uncharacterized protein 100.0 8.8E-33 3E-37 305.7 3.3 292 20-318 12-316 (328)
301 2z80_A TOLL-like receptor 2, v 100.0 3.9E-31 1.3E-35 296.5 13.8 213 42-270 22-237 (353)
302 2z66_A Variable lymphocyte rec 100.0 9.1E-30 3.1E-34 279.4 18.6 250 50-317 7-262 (306)
303 1wwl_A Monocyte differentiatio 100.0 2.6E-31 8.9E-36 292.2 3.0 267 40-316 21-309 (312)
304 3g06_A SSPH2 (leucine-rich rep 100.0 1.1E-29 3.8E-34 301.8 16.3 296 35-454 7-308 (622)
305 2z80_A TOLL-like receptor 2, v 100.0 1.3E-29 4.6E-34 284.0 14.4 283 85-446 30-317 (353)
306 3ogk_B Coronatine-insensitive 100.0 3.8E-32 1.3E-36 327.4 -7.9 431 49-518 41-528 (592)
307 2z66_A Variable lymphocyte rec 100.0 9.8E-29 3.3E-33 271.2 19.4 230 159-444 29-262 (306)
308 3zyi_A Leucine-rich repeat-con 100.0 3.3E-28 1.1E-32 282.2 22.5 242 70-317 62-304 (452)
309 3ogk_B Coronatine-insensitive 100.0 3.4E-31 1.2E-35 319.1 -5.3 439 90-585 54-548 (592)
310 1ozn_A Reticulon 4 receptor; N 100.0 4.9E-28 1.7E-32 262.6 19.5 234 55-317 6-239 (285)
311 1wwl_A Monocyte differentiatio 100.0 2.3E-29 7.8E-34 276.7 8.9 205 106-315 39-265 (312)
312 3zyj_A Leucine-rich repeat-con 100.0 1.1E-27 3.7E-32 276.8 22.0 248 159-467 44-292 (440)
313 3zyi_A Leucine-rich repeat-con 100.0 1.2E-27 4.1E-32 277.5 22.1 247 160-467 56-303 (452)
314 3zyj_A Leucine-rich repeat-con 100.0 3.4E-27 1.1E-31 272.7 23.6 242 69-419 50-292 (440)
315 3oja_A Leucine-rich immune mol 99.9 1.6E-29 5.5E-34 294.8 2.8 215 359-588 35-250 (487)
316 1ozn_A Reticulon 4 receptor; N 99.9 2.8E-27 9.7E-32 256.6 20.1 256 233-573 14-270 (285)
317 3g06_A SSPH2 (leucine-rich rep 99.9 1.3E-26 4.4E-31 275.5 26.8 269 86-478 40-308 (622)
318 3o53_A Protein LRIM1, AGAP0063 99.9 5.9E-29 2E-33 274.1 3.4 215 63-314 11-225 (317)
319 3o53_A Protein LRIM1, AGAP0063 99.9 2E-28 6.7E-33 269.9 6.8 260 143-472 19-281 (317)
320 2o6q_A Variable lymphocyte rec 99.9 2.5E-26 8.5E-31 246.9 19.2 219 47-294 2-220 (270)
321 4azs_A Methyltransferase WBDD; 99.9 9.7E-28 3.3E-32 283.5 4.8 186 681-886 241-437 (569)
322 3oja_A Leucine-rich immune mol 99.9 2.4E-26 8.2E-31 268.0 12.8 234 68-316 16-250 (487)
323 2p1m_B Transport inhibitor res 99.9 5.6E-29 1.9E-33 299.9 -10.9 455 49-539 34-543 (594)
324 2z62_A TOLL-like receptor 4, v 99.9 7E-25 2.4E-29 236.5 17.8 215 77-316 21-237 (276)
325 2z62_A TOLL-like receptor 4, v 99.9 8.9E-25 3E-29 235.7 17.2 225 91-350 12-241 (276)
326 2p1m_B Transport inhibitor res 99.9 6.1E-28 2.1E-32 290.7 -9.8 223 89-315 46-301 (594)
327 2o6q_A Variable lymphocyte rec 99.9 1.2E-23 4E-28 226.0 21.7 204 87-318 17-220 (270)
328 1p9a_G Platelet glycoprotein I 99.9 5.5E-24 1.9E-28 230.6 18.8 204 82-317 6-209 (290)
329 3rfs_A Internalin B, repeat mo 99.9 2.5E-24 8.5E-29 231.5 14.4 150 157-313 18-167 (272)
330 3rfs_A Internalin B, repeat mo 99.9 1.9E-24 6.5E-29 232.4 13.1 229 84-356 17-245 (272)
331 3m19_A Variable lymphocyte rec 99.9 5.2E-24 1.8E-28 226.1 16.3 190 48-243 3-192 (251)
332 1p9a_G Platelet glycoprotein I 99.9 1.5E-23 5.2E-28 227.1 19.8 206 105-348 5-210 (290)
333 3goz_A Leucine-rich repeat-con 99.9 1.9E-25 6.3E-30 251.0 1.9 270 67-356 3-307 (362)
334 2xwt_C Thyrotropin receptor; s 99.9 2.2E-23 7.6E-28 219.5 15.8 204 77-314 25-237 (239)
335 2xwt_C Thyrotropin receptor; s 99.9 1.7E-23 5.9E-28 220.4 13.5 203 101-343 25-236 (239)
336 4glp_A Monocyte differentiatio 99.9 1.8E-23 6.2E-28 229.4 13.4 226 87-317 65-308 (310)
337 2ast_B S-phase kinase-associat 99.9 2.7E-25 9.2E-30 247.3 -1.5 269 49-355 36-315 (336)
338 3en9_A Glycoprotease, O-sialog 99.9 4E-24 1.4E-28 251.2 7.1 191 677-888 339-539 (540)
339 4glp_A Monocyte differentiatio 99.9 3E-23 1E-27 227.7 12.4 224 63-293 65-308 (310)
340 3goz_A Leucine-rich repeat-con 99.9 1.1E-24 3.9E-29 244.6 1.0 236 62-317 22-298 (362)
341 2ast_B S-phase kinase-associat 99.9 7.8E-24 2.7E-28 235.4 5.5 224 87-343 48-282 (336)
342 3cvr_A Invasion plasmid antige 99.9 2.3E-23 7.9E-28 244.4 9.5 214 39-304 32-255 (571)
343 4ay9_X Follicle-stimulating ho 99.9 1.3E-22 4.4E-27 226.6 14.0 204 50-270 9-217 (350)
344 2ca6_A RAN GTPase-activating p 99.9 1.5E-24 5.2E-29 246.0 -2.8 265 262-592 16-320 (386)
345 2ca6_A RAN GTPase-activating p 99.9 2E-24 6.8E-29 245.1 -2.4 215 78-293 24-288 (386)
346 4ay9_X Follicle-stimulating ho 99.9 3.6E-22 1.2E-26 222.9 15.8 240 89-343 12-256 (350)
347 3m19_A Variable lymphocyte rec 99.9 1.1E-21 3.9E-26 208.0 18.8 157 160-317 37-193 (251)
348 1h6u_A Internalin H; cell adhe 99.9 5.5E-22 1.9E-26 217.0 15.4 193 84-317 39-231 (308)
349 1h6u_A Internalin H; cell adhe 99.9 7.5E-22 2.6E-26 216.0 14.8 192 63-295 42-233 (308)
350 1zar_A RIO2 kinase; serine kin 99.9 5E-22 1.7E-26 213.7 10.8 138 669-827 85-240 (282)
351 2o6s_A Variable lymphocyte rec 99.9 2E-21 6.7E-26 199.9 13.0 185 49-280 6-190 (208)
352 2o6s_A Variable lymphocyte rec 99.8 9.4E-21 3.2E-25 194.8 14.7 181 89-304 10-190 (208)
353 3cvr_A Invasion plasmid antige 99.8 1.3E-20 4.3E-25 221.2 14.5 178 87-317 60-244 (571)
354 4b8c_D Glucose-repressible alc 99.8 5.7E-22 1.9E-26 241.5 2.8 223 17-247 129-358 (727)
355 1dce_A Protein (RAB geranylger 99.8 1.1E-22 3.6E-27 240.3 -5.0 203 83-309 346-566 (567)
356 3e6j_A Variable lymphocyte rec 99.8 5.3E-20 1.8E-24 192.0 15.0 162 42-243 11-172 (229)
357 1h6t_A Internalin B; cell adhe 99.8 2E-19 6.7E-24 194.9 12.5 172 107-293 43-214 (291)
358 1m9s_A Internalin B; cell inva 99.8 1.9E-19 6.6E-24 213.7 13.4 206 86-308 21-226 (605)
359 2v9t_B SLIT homolog 2 protein 99.8 5.4E-19 1.8E-23 183.0 15.1 153 161-317 14-166 (220)
360 2xot_A Amphoterin-induced prot 99.8 4.3E-19 1.5E-23 198.8 13.5 176 113-316 21-202 (361)
361 2v70_A SLIT-2, SLIT homolog 2 99.8 1.1E-19 3.8E-24 188.1 7.6 110 483-592 61-170 (220)
362 1h6t_A Internalin B; cell adhe 99.8 3.4E-19 1.2E-23 193.1 11.3 174 82-270 42-215 (291)
363 1m9s_A Internalin B; cell inva 99.8 4.6E-19 1.6E-23 210.5 13.3 78 159-242 22-99 (605)
364 2v9t_B SLIT homolog 2 protein 99.8 1.7E-18 5.7E-23 179.3 14.4 145 72-243 21-165 (220)
365 2v70_A SLIT-2, SLIT homolog 2 99.8 2.1E-18 7E-23 178.6 15.1 153 161-317 14-167 (220)
366 2xot_A Amphoterin-induced prot 99.8 9.4E-19 3.2E-23 196.0 12.1 115 178-293 84-203 (361)
367 1dce_A Protein (RAB geranylger 99.8 1E-20 3.6E-25 223.3 -4.5 195 107-320 346-550 (567)
368 3e6j_A Variable lymphocyte rec 99.8 5.5E-18 1.9E-22 176.6 15.7 154 89-271 22-175 (229)
369 4b8c_D Glucose-repressible alc 99.7 8.8E-19 3E-23 213.5 7.7 182 373-589 215-405 (727)
370 1zth_A RIO1 serine protein kin 99.7 3.1E-18 1.1E-22 181.9 10.8 138 675-829 48-219 (258)
371 1xeu_A Internalin C; cellular 99.7 2.3E-18 7.8E-23 183.5 8.5 171 84-294 17-187 (263)
372 4ezg_A Putative uncharacterize 99.7 8E-18 2.7E-22 171.1 11.5 153 155-316 41-194 (197)
373 3sb4_A Hypothetical leucine ri 99.7 2.2E-18 7.6E-23 190.5 8.0 293 75-436 12-327 (329)
374 4ezg_A Putative uncharacterize 99.7 6.2E-18 2.1E-22 171.9 9.7 153 83-268 41-194 (197)
375 1xeu_A Internalin C; cellular 99.7 7.3E-18 2.5E-22 179.6 10.4 150 154-317 37-186 (263)
376 1w8a_A SLIT protein; signaling 99.7 5.4E-18 1.9E-22 171.4 7.1 156 458-617 12-168 (192)
377 3sb4_A Hypothetical leucine ri 99.7 5.6E-18 1.9E-22 187.3 3.6 289 148-476 13-318 (329)
378 1w8a_A SLIT protein; signaling 99.7 2.8E-16 9.5E-21 158.8 12.0 125 68-219 14-139 (192)
379 2ell_A Acidic leucine-rich nuc 99.6 3.3E-16 1.1E-20 154.7 10.8 134 84-219 22-160 (168)
380 2ell_A Acidic leucine-rich nuc 99.6 5.5E-16 1.9E-20 153.1 11.0 136 158-320 24-164 (168)
381 2je0_A Acidic leucine-rich nuc 99.6 3E-16 1E-20 151.6 7.0 130 84-215 15-149 (149)
382 2wfh_A SLIT homolog 2 protein 99.6 2.3E-15 8E-20 152.0 12.4 109 86-219 31-139 (193)
383 4fdw_A Leucine rich hypothetic 99.6 1.4E-14 4.7E-19 163.5 19.1 254 175-467 129-383 (401)
384 2wfh_A SLIT homolog 2 protein 99.6 5.9E-15 2E-19 149.0 13.6 127 161-316 13-139 (193)
385 2je0_A Acidic leucine-rich nuc 99.6 1.6E-15 5.6E-20 146.4 8.8 128 157-311 16-148 (149)
386 4fdw_A Leucine rich hypothetic 99.6 3.9E-14 1.3E-18 159.7 20.6 219 160-443 159-383 (401)
387 4gyi_A RIO2 kinase; protein ki 99.6 1.6E-15 5.4E-20 166.7 8.6 137 675-830 96-266 (397)
388 2o6r_A Variable lymphocyte rec 99.6 1.3E-14 4.5E-19 144.5 14.1 129 160-316 9-137 (177)
389 2o6r_A Variable lymphocyte rec 99.6 7.6E-15 2.6E-19 146.2 12.3 132 50-220 7-138 (177)
390 1ds9_A Outer arm dynein; leuci 99.5 1.2E-16 4.1E-21 162.5 -6.9 133 86-223 18-157 (198)
391 4fs7_A Uncharacterized protein 99.5 2.5E-13 8.6E-18 153.8 19.7 331 150-580 63-393 (394)
392 1ds9_A Outer arm dynein; leuci 99.5 3.4E-16 1.2E-20 159.1 -4.1 154 379-564 15-185 (198)
393 4fs7_A Uncharacterized protein 99.5 3E-13 1E-17 153.1 19.6 318 170-585 59-376 (394)
394 1a9n_A U2A', U2A'; complex (nu 99.5 1.8E-14 6.1E-19 143.3 7.9 132 178-315 15-152 (176)
395 1a9n_A U2A', U2A'; complex (nu 99.5 1.3E-14 4.4E-19 144.4 6.1 133 81-219 14-153 (176)
396 3g39_A Variable lymphocyte rec 99.4 1.2E-13 4.1E-18 136.3 8.4 109 482-593 12-120 (170)
397 2r9u_A Variable lymphocyte rec 99.4 2.3E-13 7.8E-18 134.7 8.4 108 482-592 15-122 (174)
398 3g39_A Variable lymphocyte rec 99.4 1.3E-12 4.4E-17 128.8 12.1 105 185-293 12-116 (170)
399 2r9u_A Variable lymphocyte rec 99.4 1.9E-12 6.6E-17 128.0 11.9 104 185-292 15-118 (174)
400 2ifg_A High affinity nerve gro 99.2 4.1E-12 1.4E-16 141.2 6.3 131 483-616 12-146 (347)
401 2ifg_A High affinity nerve gro 99.2 1.4E-11 4.7E-16 137.0 7.4 109 506-616 11-121 (347)
402 4gt6_A Cell surface protein; l 99.2 3.6E-10 1.2E-14 127.7 19.1 133 149-287 54-190 (394)
403 3un9_A NLR family member X1; l 99.2 5E-13 1.7E-17 149.2 -4.9 164 405-589 71-253 (372)
404 4gt6_A Cell surface protein; l 99.2 5.8E-10 2E-14 126.0 20.3 157 129-292 58-218 (394)
405 3un9_A NLR family member X1; l 99.2 3.6E-13 1.2E-17 150.3 -6.3 38 182-219 72-114 (372)
406 3tm0_A Aminoglycoside 3'-phosp 99.1 2.9E-10 9.8E-15 120.8 13.7 145 671-827 11-212 (263)
407 1nd4_A Aminoglycoside 3'-phosp 98.9 3.2E-09 1.1E-13 112.5 9.0 136 675-827 21-213 (264)
408 4h09_A Hypothetical leucine ri 98.9 6.3E-08 2.2E-12 108.7 19.9 134 399-561 210-343 (379)
409 3rw6_A Nuclear RNA export fact 98.9 1.6E-11 5.5E-16 128.5 -9.2 192 19-236 34-257 (267)
410 2ra8_A Uncharacterized protein 98.8 5.7E-10 2E-14 123.3 2.4 206 62-290 107-341 (362)
411 2ra8_A Uncharacterized protein 98.8 7.3E-10 2.5E-14 122.4 2.7 215 85-344 106-341 (362)
412 4h09_A Hypothetical leucine ri 98.8 1.4E-07 4.8E-12 105.8 20.4 152 404-585 192-343 (379)
413 3dxp_A Putative acyl-COA dehyd 98.7 2.4E-08 8E-13 111.3 10.7 145 678-828 42-248 (359)
414 3sg8_A APH(2'')-ID; antibiotic 98.6 1.7E-08 5.9E-13 109.5 5.9 196 679-887 25-287 (304)
415 1io0_A Tropomodulin; LRR prote 98.3 2.6E-08 8.8E-13 99.2 -2.6 123 77-219 27-164 (185)
416 3rw6_A Nuclear RNA export fact 98.3 1.1E-07 3.7E-12 99.5 0.9 80 379-460 167-257 (267)
417 3r70_A Aminoglycoside phosphot 98.3 3.2E-06 1.1E-10 92.2 12.4 136 675-828 38-237 (320)
418 3d1u_A Putative fructosamine-3 98.2 5.5E-06 1.9E-10 88.5 10.5 76 678-763 19-97 (288)
419 1io0_A Tropomodulin; LRR prote 98.2 1.7E-07 5.7E-12 93.3 -1.4 121 103-243 29-164 (185)
420 4gkh_A Aminoglycoside 3'-phosp 98.1 3.7E-05 1.3E-09 81.4 14.3 135 681-827 31-222 (272)
421 3tdw_A Gentamicin resistance p 98.0 2.4E-05 8.2E-10 84.5 11.3 136 679-827 24-223 (306)
422 3ovc_A Hygromycin-B 4-O-kinase 97.9 4.1E-05 1.4E-09 84.7 11.8 77 677-764 44-122 (362)
423 2olc_A MTR kinase, methylthior 97.7 6.4E-05 2.2E-09 84.5 8.7 76 679-761 35-120 (397)
424 3ats_A Putative uncharacterize 97.6 5E-05 1.7E-09 84.0 7.1 84 679-764 25-121 (357)
425 3e4g_A ATP synthase subunit S, 97.6 2.8E-05 9.7E-10 75.1 2.9 82 112-193 63-150 (176)
426 3e4g_A ATP synthase subunit S, 97.4 7E-05 2.4E-09 72.4 3.4 83 87-169 62-150 (176)
427 2q83_A YTAA protein; 2635576, 97.4 0.00026 8.9E-09 77.7 8.4 43 785-827 199-251 (346)
428 3jr1_A Putative fructosamine-3 97.1 0.003 1E-07 67.7 12.6 75 679-763 41-118 (312)
429 3f7w_A Putative fructosamine-3 97.0 0.0015 5E-08 69.7 9.5 78 675-762 16-96 (288)
430 3rfe_A Platelet glycoprotein I 96.9 0.00083 2.9E-08 61.8 5.6 60 555-616 12-73 (130)
431 2pyw_A Uncharacterized protein 96.9 0.0023 7.9E-08 72.2 9.5 78 797-884 231-313 (420)
432 2ppq_A HSK, HK, homoserine kin 96.8 0.0022 7.5E-08 69.5 8.3 161 663-827 6-216 (322)
433 1pgv_A TMD-1, tropomodulin TMD 96.7 0.00041 1.4E-08 68.4 1.5 117 227-344 38-168 (197)
434 1pgv_A TMD-1, tropomodulin TMD 96.7 0.00053 1.8E-08 67.6 2.0 113 202-315 37-169 (197)
435 1zyl_A Hypothetical protein YI 96.5 0.0084 2.9E-07 65.0 10.6 143 680-827 32-222 (328)
436 2qg7_A Ethanolamine kinase PV0 96.3 0.011 3.8E-07 67.0 10.3 74 679-762 113-187 (458)
437 3rfe_A Platelet glycoprotein I 96.3 0.0059 2E-07 56.1 6.3 37 280-316 32-68 (130)
438 3dxq_A Choline/ethanolamine ki 96.3 0.0028 9.4E-08 68.0 4.7 71 679-763 23-95 (301)
439 2yle_A Protein spire homolog 1 96.2 0.02 6.7E-07 56.6 9.7 99 761-883 33-132 (229)
440 1nw1_A Choline kinase (49.2 KD 96.2 0.0084 2.9E-07 67.6 8.2 73 679-762 78-158 (429)
441 3csv_A Aminoglycoside phosphot 96.0 0.029 1E-06 60.8 11.6 31 798-828 183-217 (333)
442 3feg_A Choline/ethanolamine ki 95.9 0.021 7E-07 63.0 9.8 139 679-827 55-253 (379)
443 3c5i_A Choline kinase; choline 95.7 0.014 4.6E-07 64.6 7.2 74 679-762 38-120 (369)
444 3i1a_A Spectinomycin phosphotr 95.0 0.067 2.3E-06 58.1 9.6 31 798-828 206-236 (339)
445 3f2s_A CK, chetk-alpha, cholin 93.8 0.16 5.5E-06 56.0 9.4 29 799-827 245-279 (401)
446 3mes_A Choline kinase; malaria 92.2 0.19 6.4E-06 56.1 7.0 74 679-762 75-156 (424)
447 3g15_A CK, chetk-alpha, cholin 87.8 1 3.4E-05 50.0 8.2 30 799-828 245-280 (401)
448 4ann_A ESSB; membrane protein, 68.6 9.2 0.00031 37.6 6.8 117 729-890 43-160 (215)
449 3cxl_A N-chimerin; SH2, RHO-GA 66.9 0.71 2.4E-05 52.2 -1.8 63 677-742 145-215 (463)
450 4ano_A ESSB; membrane protein, 53.0 13 0.00044 36.7 4.7 115 729-889 48-164 (219)
451 2lz0_A Uncharacterized protein 38.4 61 0.0021 27.3 6.2 44 245-289 10-53 (100)
452 2lz0_A Uncharacterized protein 37.9 34 0.0012 29.0 4.5 49 265-314 6-54 (100)
453 3ox7_P MH027; urokinase-type p 24.3 21 0.00073 20.1 0.5 9 48-56 6-14 (23)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=7.3e-83 Score=789.90 Aligned_cols=598 Identities=29% Similarity=0.430 Sum_probs=449.7
Q ss_pred ccccchhhHHHHHHHHhhccCCCcCCCCCCCCCCCCCceeeeEeeCCCCeEEEEEeeccCcccc---cc-----------
Q 039720 14 SRHATSHVKHATVTFNMQQLHDPLGVTKSWNNSINLCQWTGVTCGHRHQRVTKLDLESQNIGGF---LS----------- 79 (973)
Q Consensus 14 ~~~~~~~~~~~ll~~~~~~~~d~~~~l~sw~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~---~~----------- 79 (973)
+..+...|++|||+||+++. ||. +++||+.++|||.|.||+|+ +++|+.|||+++++.|. +|
T Consensus 6 ~~~~~~~~~~all~~k~~~~-~~~-~l~~W~~~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~ 81 (768)
T 3rgz_A 6 PSQSLYREIHQLISFKDVLP-DKN-LLPDWSSNKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLES 81 (768)
T ss_dssp --CCHHHHHHHHHHHHTTCS-CTT-SSTTCCTTSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCE
T ss_pred cccCCHHHHHHHHHHHhhCC-Ccc-cccCCCCCCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCcccc
Confidence 34556778999999999875 888 99999988899999999998 68999999999999887 54
Q ss_pred ------------CCCcCCCCCCEEEccCCCCCCCCCc--cccccCCCCEEeeecccCCCCCCccc-ccCCCccceEeccc
Q 039720 80 ------------PYIGNLSFLRVINLANNSFHGQIPK--EVGRLFRLETIVLSNNSFSGKIPTNL-SRCFNLIDFWVHTN 144 (973)
Q Consensus 80 ------------~~l~~l~~L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~Ls~n~l~~~~p~~~-~~l~~L~~L~l~~n 144 (973)
+.++.+++|++|||++|.++|.+|. .++++++|++|+|++|.+++.+|..+ +++++|++|++++|
T Consensus 82 l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n 161 (768)
T 3rgz_A 82 LFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSAN 161 (768)
T ss_dssp EECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSS
T ss_pred cCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCC
Confidence 4788889999999999999999998 99999999999999999999888877 78999999999999
Q ss_pred ccccchhhh---hccccccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCcccc
Q 039720 145 NLVGEIQAI---IGNWLKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGM 221 (973)
Q Consensus 145 ~~~~~~~~~---~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~ 221 (973)
++.+..|.. +.++++|++|++++|.+++..|. +++++|++|+|++|++++.+|. ++++++|++|++++|++++.
T Consensus 162 ~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~ 238 (768)
T 3rgz_A 162 SISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGD 238 (768)
T ss_dssp CCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSC
T ss_pred ccCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCc
Confidence 999888876 66666666666666655543332 4445555555555555444444 44455555555555554444
Q ss_pred CCccccC----------------------CCCCcEEEccCCccccCCCcccccCCCCCcEEEccCCcccccCCccccCCC
Q 039720 222 FPLSVCN----------------------ISSLDEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNAS 279 (973)
Q Consensus 222 ~p~~~~~----------------------l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 279 (973)
+|..+.+ +++|++|+|++|++++.+|..++..+++|++|+|++|.+++.+|..|++++
T Consensus 239 ~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~ 318 (768)
T 3rgz_A 239 FSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCS 318 (768)
T ss_dssp HHHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCT
T ss_pred ccHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCC
Confidence 4444444 445555555555555566666654447777777777777777777777777
Q ss_pred CCCEEEccCCcccccCccc-ccCcccccceecccccCCCCCCCChhhhh-------------------hhcc--ccccee
Q 039720 280 KLEWLELNENHFSGQVRIN-FNSLPNLSKLYLGRNNLGTRTSTDLDFIT-------------------LLTN--CSKLVK 337 (973)
Q Consensus 280 ~L~~L~Ls~N~l~~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~~~-------------------~l~~--l~~L~~ 337 (973)
+|++|+|++|++++.+|.. |..+++|++|+|++|+++......+.... .+.. +++|++
T Consensus 319 ~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~ 398 (768)
T 3rgz_A 319 LLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQE 398 (768)
T ss_dssp TCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCE
T ss_pred CccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccE
Confidence 7777777777777555544 67777777777777776532222111110 0111 345566
Q ss_pred eccccccccCCCChhhhhhhhhhhHhhhcCCccccCCCccccCCCCcCEEEcccccCCCCCCccccCCCCCCeEEccCcc
Q 039720 338 LGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEIRNLFNLNGLGLEYNQLTGTIPPAIGELRNLQYLGLVGNN 417 (973)
Q Consensus 338 L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 417 (973)
|++++|++.+.+|..+..+ ..++.|++++|++++.+|..+..+++|+.|+|++|++++.+|..+..+++|++|+|++|+
T Consensus 399 L~L~~n~l~~~~p~~l~~l-~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~ 477 (768)
T 3rgz_A 399 LYLQNNGFTGKIPPTLSNC-SELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFND 477 (768)
T ss_dssp EECCSSEEEEECCGGGGGC-TTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSC
T ss_pred EECCCCccccccCHHHhcC-CCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCc
Confidence 6666666666666665554 456667777777777777777777777777777777777777777777777777777777
Q ss_pred cCCCCCCccCCcCccceEEcCCCccccccccccccccccccccccCcccccCCCccccccccccceeeccCCcccccCCc
Q 039720 418 IRGIIPDPIGNLTLLNVLQLGFNKLQGSIPSYLGKCQNLMQLSAPNNKLNGTLPPQIFGITTLSKLLDLSENHLSGSIPL 497 (973)
Q Consensus 418 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~ 497 (973)
+++.+|..+.++++|++|+|++|++++.+|.+++.+++|++|++++|++.|.+|..+..+..+. .|++++|+++|.+|.
T Consensus 478 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~-~L~Ls~N~l~g~ip~ 556 (768)
T 3rgz_A 478 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLI-WLDLNTNLFNGTIPA 556 (768)
T ss_dssp CCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCC-EEECCSSEEESBCCG
T ss_pred ccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCC-EEECCCCccCCcCCh
Confidence 7777777777777777777777777777777777777777777777777777777776666654 677777777766664
Q ss_pred c----------------------------------------------------------------------cccccccce
Q 039720 498 E----------------------------------------------------------------------VGNLKSLVQ 507 (973)
Q Consensus 498 ~----------------------------------------------------------------------~~~l~~L~~ 507 (973)
. ++.+++|+.
T Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~ 636 (768)
T 3rgz_A 557 AMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMF 636 (768)
T ss_dssp GGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCE
T ss_pred HHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccE
Confidence 3 444678999
Q ss_pred eccccCcccccccccccCccchhhhcccCcccccccccchhhhccCCeecCCCCccccccCCCCCCCCccceEeccCCcC
Q 039720 508 LDISRNNFSNEIPVTLSACTTLEYLLMQGNSFNGSIPQSLNALKSIKELDLSCNNLSGQIPIHLGNLPFLEYLNLSYNHF 587 (973)
Q Consensus 508 L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l 587 (973)
|||++|+++|.+|..++++++|+.|+|++|+++|.+|..++++++|+.|||++|+++|.+|..+..+++|++|||++|++
T Consensus 637 LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l 716 (768)
T 3rgz_A 637 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNL 716 (768)
T ss_dssp EECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEE
T ss_pred EECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCCCCCCCCCccccccccCccccCCCCCCCCCCCC
Q 039720 588 EGKVPKKGVFSNETRISLTGNEQFCGGLGELHLPACH 624 (973)
Q Consensus 588 ~~~~p~~~~~~~~~~l~~~~N~~~cg~~~~~~~~~~~ 624 (973)
+|.+|..++|.++...++.|||++||.++ +.|.
T Consensus 717 ~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l----~~C~ 749 (768)
T 3rgz_A 717 SGPIPEMGQFETFPPAKFLNNPGLCGYPL----PRCD 749 (768)
T ss_dssp EEECCSSSSGGGSCGGGGCSCTEEESTTS----CCCC
T ss_pred cccCCCchhhccCCHHHhcCCchhcCCCC----cCCC
Confidence 99999999999999999999999999875 3675
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=4.4e-65 Score=630.75 Aligned_cols=518 Identities=34% Similarity=0.527 Sum_probs=437.5
Q ss_pred CeEEEEEeeccCccccccC--CCcCCCCCCEEEccCCCCCCCCCccc-c-------------------------------
Q 039720 62 QRVTKLDLESQNIGGFLSP--YIGNLSFLRVINLANNSFHGQIPKEV-G------------------------------- 107 (973)
Q Consensus 62 ~~v~~l~l~~~~l~g~~~~--~l~~l~~L~~L~L~~n~l~~~~p~~~-~------------------------------- 107 (973)
.+++.|||+++.+.|.+|+ .++++++|++|+|++|.+++.+|..+ +
T Consensus 100 ~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~ 179 (768)
T 3rgz_A 100 ASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGE 179 (768)
T ss_dssp TTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTT
T ss_pred CCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCC
Confidence 4677888888888888887 78888888888888888777766543 3
Q ss_pred ------------------ccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccceeeccCCc
Q 039720 108 ------------------RLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLYGNQ 169 (973)
Q Consensus 108 ------------------~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~ 169 (973)
++++|++|+|++|.+++.+|. ++++++|++|++++|++.+.+|..++++++|++|+|++|+
T Consensus 180 L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~ 258 (768)
T 3rgz_A 180 LKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQ 258 (768)
T ss_dssp CCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSC
T ss_pred CCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCc
Confidence 344455555555555555555 6777777777777777777777777777777777777777
Q ss_pred ccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCC-CccceeccCCCCccccCCccccCCCCCcEEEccCCccccCCCc
Q 039720 170 LTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQL-RNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFKGSLPV 248 (973)
Q Consensus 170 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~ 248 (973)
+++.+|.. .+++|++|++++|++++.+|..+.++ ++|++|+|++|.+++.+|..|+++++|++|+|++|+++|.+|.
T Consensus 259 l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~ 336 (768)
T 3rgz_A 259 FVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPM 336 (768)
T ss_dssp CEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCH
T ss_pred ccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCH
Confidence 77766664 67777777777777777788777765 8888888888888888888888888888888888888888887
Q ss_pred ccccCCCCCcEEEccCCcccccCCccccCCC-CCCEEEccCCcccccCcccccC--cccccceecccccCCCCCCCChhh
Q 039720 249 CLGFNLPKLTVLVVAQNNLTGFLPQSLSNAS-KLEWLELNENHFSGQVRINFNS--LPNLSKLYLGRNNLGTRTSTDLDF 325 (973)
Q Consensus 249 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~ 325 (973)
..+.++++|++|+|++|.+++.+|..+.+++ +|++|+|++|++++..+..+.. +++|++|+|++|+++...
T Consensus 337 ~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~------ 410 (768)
T 3rgz_A 337 DTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKI------ 410 (768)
T ss_dssp HHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEEC------
T ss_pred HHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCcccccc------
Confidence 7555788888888888888888888888877 8888888888888777777766 778888888888886432
Q ss_pred hhhhcccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCccccCCCccccCCCCcCEEEcccccCCCCCCccccCC
Q 039720 326 ITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEIRNLFNLNGLGLEYNQLTGTIPPAIGEL 405 (973)
Q Consensus 326 ~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 405 (973)
+..+.++++|+.|++++|++.+.+|..+..+ +.++.|++++|++++.+|..+..+++|++|+|++|++++.+|.++..+
T Consensus 411 p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 489 (768)
T 3rgz_A 411 PPTLSNCSELVSLHLSFNYLSGTIPSSLGSL-SKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNC 489 (768)
T ss_dssp CGGGGGCTTCCEEECCSSEEESCCCGGGGGC-TTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGC
T ss_pred CHHHhcCCCCCEEECcCCcccCcccHHHhcC-CCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcC
Confidence 2456789999999999999999999999887 579999999999999999999999999999999999999999999999
Q ss_pred CCCCeEEccCcccCCCCCCccCCcCccceEEcCCCccccccccccccccccccccccCcccccCCCccccccc-------
Q 039720 406 RNLQYLGLVGNNIRGIIPDPIGNLTLLNVLQLGFNKLQGSIPSYLGKCQNLMQLSAPNNKLNGTLPPQIFGIT------- 478 (973)
Q Consensus 406 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~------- 478 (973)
++|++|+|++|++++.+|.+++.+++|++|+|++|++++.+|..++.+++|+.|++++|+++|.+|..++...
T Consensus 490 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~ 569 (768)
T 3rgz_A 490 TNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANF 569 (768)
T ss_dssp TTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCST
T ss_pred CCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhc
Confidence 9999999999999999999999999999999999999999999999999999999999999999998765421
Q ss_pred --------------------------------------------------------------cccceeeccCCcccccCC
Q 039720 479 --------------------------------------------------------------TLSKLLDLSENHLSGSIP 496 (973)
Q Consensus 479 --------------------------------------------------------------~l~~~L~Ls~N~l~~~~p 496 (973)
..++.|||++|+++|.+|
T Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip 649 (768)
T 3rgz_A 570 IAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIP 649 (768)
T ss_dssp TCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCC
T ss_pred cccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCC
Confidence 223579999999999999
Q ss_pred cccccccccceeccccCcccccccccccCccchhhhcccCcccccccccchhhhccCCeecCCCCccccccCCCCCCCCc
Q 039720 497 LEVGNLKSLVQLDISRNNFSNEIPVTLSACTTLEYLLMQGNSFNGSIPQSLNALKSIKELDLSCNNLSGQIPIHLGNLPF 576 (973)
Q Consensus 497 ~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 576 (973)
..++++++|+.|+|++|+++|.+|..|+++++|+.|||++|+++|.+|..+..++.|++|||++|+++|.+|.. +.+..
T Consensus 650 ~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~-~~~~~ 728 (768)
T 3rgz_A 650 KEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM-GQFET 728 (768)
T ss_dssp GGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS-SSGGG
T ss_pred HHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc-hhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999975 45566
Q ss_pred cceEeccCCc-CcCc
Q 039720 577 LEYLNLSYNH-FEGK 590 (973)
Q Consensus 577 L~~L~ls~N~-l~~~ 590 (973)
+....+.+|+ ++|.
T Consensus 729 ~~~~~~~gN~~Lcg~ 743 (768)
T 3rgz_A 729 FPPAKFLNNPGLCGY 743 (768)
T ss_dssp SCGGGGCSCTEEEST
T ss_pred CCHHHhcCCchhcCC
Confidence 6667788886 6664
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=9e-61 Score=586.93 Aligned_cols=564 Identities=21% Similarity=0.201 Sum_probs=477.7
Q ss_pred CceeeeEeeCC---------CCeEEEEEeeccCccccccCCCcCCCCCCEEEccCCCCCCCCCccccccCCCCEEeeecc
Q 039720 50 CQWTGVTCGHR---------HQRVTKLDLESQNIGGFLSPYIGNLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNN 120 (973)
Q Consensus 50 c~w~gv~C~~~---------~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n 120 (973)
|.++-|.|+.. ..+++.|+|+++.+.+..+..++++++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 4 ~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 4 VSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83 (680)
T ss_dssp CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSS
T ss_pred eECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCC
Confidence 45566777642 247899999999999877778999999999999999999988999999999999999999
Q ss_pred cCCCCCCcccccCCCccceEecccccccchhhhhccccccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCC
Q 039720 121 SFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPD 200 (973)
Q Consensus 121 ~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 200 (973)
.+++..+..|+++++|++|++++|++.+..|..|+++++|++|+|++|.+++..|..|+++++|++|++++|++++..+.
T Consensus 84 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 163 (680)
T 1ziw_A 84 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSE 163 (680)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHH
T ss_pred ccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHH
Confidence 99954445799999999999999999988889999999999999999999998899999999999999999999987777
Q ss_pred ccc--CCCccceeccCCCCccccCCccccCC---------------------------CCCcEEEccCCccccCCCcccc
Q 039720 201 SLG--QLRNLNYLGTSENDFSGMFPLSVCNI---------------------------SSLDEAYLFKNRFKGSLPVCLG 251 (973)
Q Consensus 201 ~~~--~L~~L~~L~Ls~N~l~~~~p~~~~~l---------------------------~~L~~L~L~~N~l~~~ip~~~~ 251 (973)
.+. .+++|++|++++|.+++..|..+..+ ++|+.|++++|++++..|..+.
T Consensus 164 ~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~ 243 (680)
T 1ziw_A 164 ELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFL 243 (680)
T ss_dssp HHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTG
T ss_pred HhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhh
Confidence 654 56899999999999999888877655 4567777788888766565554
Q ss_pred cCCC--CCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceecccccCCCCCC-CChhh--h
Q 039720 252 FNLP--KLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNLGTRTS-TDLDF--I 326 (973)
Q Consensus 252 ~~l~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~--~ 326 (973)
+++ +|++|+|++|.+++..|..|..+++|++|+|++|++++..+..|.++++|++|++++|....... ..+.. .
T Consensus 244 -~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~ 322 (680)
T 1ziw_A 244 -GLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDD 322 (680)
T ss_dssp -GGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECT
T ss_pred -ccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccCh
Confidence 454 49999999999988888889999999999999999998888889999999999998875432100 00000 0
Q ss_pred hhhcccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCccccC--CCccccCC--CCcCEEEcccccCCCCCCccc
Q 039720 327 TLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGT--IPPEIRNL--FNLNGLGLEYNQLTGTIPPAI 402 (973)
Q Consensus 327 ~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~--~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~ 402 (973)
..+..+++|++|++++|++.+..|..+..+ ..++.|++++|.+.+. ....|..+ ++|+.|++++|++++..|.+|
T Consensus 323 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~ 401 (680)
T 1ziw_A 323 FSFQWLKCLEHLNMEDNDIPGIKSNMFTGL-INLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAF 401 (680)
T ss_dssp TTTTTCTTCCEEECCSCCBCCCCTTTTTTC-TTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTT
T ss_pred hhcccCCCCCEEECCCCccCCCChhHhccc-cCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhh
Confidence 145678899999999999998777777665 5789999999875432 23334433 589999999999999999999
Q ss_pred cCCCCCCeEEccCcccCCCCC-CccCCcCccceEEcCCCccccccccccccccccccccccCcccc--cCCCcccccccc
Q 039720 403 GELRNLQYLGLVGNNIRGIIP-DPIGNLTLLNVLQLGFNKLQGSIPSYLGKCQNLMQLSAPNNKLN--GTLPPQIFGITT 479 (973)
Q Consensus 403 ~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~--~~~p~~~~~~~~ 479 (973)
..+++|++|+|++|++.+.+| ..|.++++|++|++++|++++..+..|..+++|+.|++++|.+. +.+|..+..+..
T Consensus 402 ~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~ 481 (680)
T 1ziw_A 402 SWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRN 481 (680)
T ss_dssp TTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTT
T ss_pred hCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCC
Confidence 999999999999999987666 68999999999999999999888999999999999999999987 577888887777
Q ss_pred ccceeeccCCcccccCCcccccccccceeccccCccccccc--------ccccCccchhhhcccCcccccccccchhhhc
Q 039720 480 LSKLLDLSENHLSGSIPLEVGNLKSLVQLDISRNNFSNEIP--------VTLSACTTLEYLLMQGNSFNGSIPQSLNALK 551 (973)
Q Consensus 480 l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p--------~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 551 (973)
+. .|++++|++++..|..|..+++|+.|++++|++++..+ ..|.++++|+.|+|++|+++...+..|..++
T Consensus 482 L~-~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~ 560 (680)
T 1ziw_A 482 LT-ILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLF 560 (680)
T ss_dssp CC-EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred CC-EEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHccccc
Confidence 75 99999999998888889999999999999999986422 2378999999999999999955555799999
Q ss_pred cCCeecCCCCccccccCCCCCCCCccceEeccCCcCcCcCCCCC--CCCCccccccccCccccCCCC
Q 039720 552 SIKELDLSCNNLSGQIPIHLGNLPFLEYLNLSYNHFEGKVPKKG--VFSNETRISLTGNEQFCGGLG 616 (973)
Q Consensus 552 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~--~~~~~~~l~~~~N~~~cg~~~ 616 (973)
+|+.|+|++|+|++..+..|..+++|+.|+|++|++++.+|... .+++++.+++.+|||.|+|..
T Consensus 561 ~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 561 ELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred CcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 99999999999997666778999999999999999999887642 478899999999999999864
No 4
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.3e-60 Score=577.30 Aligned_cols=501 Identities=20% Similarity=0.244 Sum_probs=359.7
Q ss_pred cccchhhHHHHHHHHhhccCCCcC-------CCCCCCCCCCCCce---eeeEeeCCCCeEEEEEeeccCccccccCCCcC
Q 039720 15 RHATSHVKHATVTFNMQQLHDPLG-------VTKSWNNSINLCQW---TGVTCGHRHQRVTKLDLESQNIGGFLSPYIGN 84 (973)
Q Consensus 15 ~~~~~~~~~~ll~~~~~~~~d~~~-------~l~sw~~~~~~c~w---~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~ 84 (973)
.++...|++||.+|+.+...+.+. ..++|+.+++||.| .||+|+.. ++|+.|+|+++++.|.+|+++++
T Consensus 25 ~~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~~l~~ 103 (636)
T 4eco_A 25 TAEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPDAIGQ 103 (636)
T ss_dssp CCHHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTT-CCEEEEECTTSCCEEEECGGGGG
T ss_pred hhhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCC-CCEEEEEecCcccCCcCChHHhc
Confidence 344457899999999876433332 34589988999999 99999865 89999999999999999999999
Q ss_pred CCCCCEEEccCCCC------CC------CCCccccccCCCCEEeeecccCCCCCCcccccC-CCccceEecccccccchh
Q 039720 85 LSFLRVINLANNSF------HG------QIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRC-FNLIDFWVHTNNLVGEIQ 151 (973)
Q Consensus 85 l~~L~~L~L~~n~l------~~------~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l-~~L~~L~l~~n~~~~~~~ 151 (973)
|++|++|+|++|.+ .| .+|.+. +.+|+ +++++|.+.+.+|..++.+ ..+..+++....+..
T Consensus 104 L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~--- 177 (636)
T 4eco_A 104 LTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKK--- 177 (636)
T ss_dssp CTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCC---
T ss_pred CccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCcccccccc---
Confidence 99999999999987 33 566555 67788 9999999999888877642 222222222211110
Q ss_pred hhhccccccceeecc--CCcccccCCCCCCCCCcccEEEccCCcCCCC-----------------CCCccc--CCCccce
Q 039720 152 AIIGNWLKIERLSLY--GNQLTGQLPPSIGNLSALQTFDIAGNKLDGR-----------------IPDSLG--QLRNLNY 210 (973)
Q Consensus 152 ~~~~~l~~L~~L~L~--~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-----------------~p~~~~--~L~~L~~ 210 (973)
.....++.+.+. +|++++ +|.+|+++++|++|+|++|++++. +|..++ ++++|++
T Consensus 178 ---~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~ 253 (636)
T 4eco_A 178 ---SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTD 253 (636)
T ss_dssp ---CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCE
T ss_pred ---ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCE
Confidence 111223333333 466776 677777777777777777777764 777777 7777777
Q ss_pred eccCCCCccccCCccccCCCCCcEEEccCCc-ccc-CCCcccccCC------CCCcEEEccCCcccccCCc--cccCCCC
Q 039720 211 LGTSENDFSGMFPLSVCNISSLDEAYLFKNR-FKG-SLPVCLGFNL------PKLTVLVVAQNNLTGFLPQ--SLSNASK 280 (973)
Q Consensus 211 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~ip~~~~~~l------~~L~~L~Ls~N~l~~~~p~--~~~~l~~ 280 (973)
|+|++|.+.+.+|..|+++++|++|+|++|+ ++| .+|..++ ++ ++|++|+|++|.++ .+|. .|+++++
T Consensus 254 L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~-~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~ 331 (636)
T 4eco_A 254 VEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQ-ALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKK 331 (636)
T ss_dssp EEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHH-HHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTT
T ss_pred EEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHH-hhhccccCCCCCEEECCCCcCC-ccCchhhhccCCC
Confidence 7777777777777777777777777777776 666 6776665 33 78888888888888 6777 7888888
Q ss_pred CCEEEccCCcccccCcccccCcccccceecccccCCCCCCCChhhhhhhcccccceeeccccccccCCCChhhhhhhhhh
Q 039720 281 LEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNLGTRTSTDLDFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTM 360 (973)
Q Consensus 281 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l 360 (973)
|++|+|++|+++|.+| .|..+++|++|+|++|+++
T Consensus 332 L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-------------------------------------------- 366 (636)
T 4eco_A 332 LGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-------------------------------------------- 366 (636)
T ss_dssp CCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE--------------------------------------------
T ss_pred CCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc--------------------------------------------
Confidence 8888888888887677 7777777777777777653
Q ss_pred hHhhhcCCccccCCCccccCCCC-cCEEEcccccCCCCCCccccCCC--CCCeEEccCcccCCCCCCccC-------CcC
Q 039720 361 TLIAMAGNQISGTIPPEIRNLFN-LNGLGLEYNQLTGTIPPAIGELR--NLQYLGLVGNNIRGIIPDPIG-------NLT 430 (973)
Q Consensus 361 ~~L~l~~n~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~p~~~~-------~l~ 430 (973)
.+|..+..+++ |++|+|++|+++ .+|..+..++ +|++|++++|++.+..|..|. .++
T Consensus 367 ------------~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~ 433 (636)
T 4eco_A 367 ------------EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGI 433 (636)
T ss_dssp ------------ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCC
T ss_pred ------------cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCC
Confidence 23444555666 666666666666 5566665543 667777777777666666666 566
Q ss_pred ccceEEcCCCccccccccccccccccccccccCcccccCCCcccccccc-------ccceeeccCCcccccCCcccc--c
Q 039720 431 LLNVLQLGFNKLQGSIPSYLGKCQNLMQLSAPNNKLNGTLPPQIFGITT-------LSKLLDLSENHLSGSIPLEVG--N 501 (973)
Q Consensus 431 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~-------l~~~L~Ls~N~l~~~~p~~~~--~ 501 (973)
+|++|+|++|+++...+..+..+++|+.|++++|+++ .+|...+.... .++.|+|++|+++ .+|..+. .
T Consensus 434 ~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~ 511 (636)
T 4eco_A 434 NVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATT 511 (636)
T ss_dssp CEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTT
T ss_pred CCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhcc
Confidence 7777777777777332333445677777777777776 66666555431 3347777777777 5676665 7
Q ss_pred ccccceeccccCcccccccccccCccchhhhcc------cCcccccccccchhhhccCCeecCCCCccccccCCCCCCCC
Q 039720 502 LKSLVQLDISRNNFSNEIPVTLSACTTLEYLLM------QGNSFNGSIPQSLNALKSIKELDLSCNNLSGQIPIHLGNLP 575 (973)
Q Consensus 502 l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L------~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 575 (973)
+++|+.|+|++|++++ +|..+.++++|+.|+| ++|++.+.+|..+..+++|++|+|++|+| +.+|..+. +
T Consensus 512 l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~ 587 (636)
T 4eco_A 512 LPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--P 587 (636)
T ss_dssp CTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--T
T ss_pred CCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--C
Confidence 7788888888888875 7777777888888877 56888889999999999999999999999 58888876 7
Q ss_pred ccceEeccCCcCcCcCC
Q 039720 576 FLEYLNLSYNHFEGKVP 592 (973)
Q Consensus 576 ~L~~L~ls~N~l~~~~p 592 (973)
+|+.|+|++|++....+
T Consensus 588 ~L~~L~Ls~N~l~~~~~ 604 (636)
T 4eco_A 588 NISVLDIKDNPNISIDL 604 (636)
T ss_dssp TCCEEECCSCTTCEEEC
T ss_pred cCCEEECcCCCCccccH
Confidence 89999999998876544
No 5
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=3.5e-57 Score=547.55 Aligned_cols=494 Identities=19% Similarity=0.197 Sum_probs=361.1
Q ss_pred CCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccceeecc
Q 039720 87 FLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLY 166 (973)
Q Consensus 87 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~ 166 (973)
.+++|+|++|++++..|..|+++++|++|+|++|.+++..|..|+++++|++|++++|++.+..|..|+++++|++|+|+
T Consensus 34 ~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 113 (606)
T 3t6q_A 34 STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFI 113 (606)
T ss_dssp TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECT
T ss_pred cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeecc
Confidence 45666666666665556666666666666666666665556666666666666666666666666666666666666666
Q ss_pred CCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCc--EEEccCCcccc
Q 039720 167 GNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLD--EAYLFKNRFKG 244 (973)
Q Consensus 167 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~--~L~L~~N~l~~ 244 (973)
+|++++..|..|+++++|++|++++|++++..+..+..+++|++|++++|.+++..|..|..+++|+ .|++++|++++
T Consensus 114 ~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~ 193 (606)
T 3t6q_A 114 QTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAG 193 (606)
T ss_dssp TSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCE
T ss_pred ccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCc
Confidence 6666655556666666666666666666643333334466666666666666666666666666666 66666666664
Q ss_pred CCCcccccCCCCCcEEEccCCcc--------------------------cccCCccccCCC--CCCEEEccCCcccccCc
Q 039720 245 SLPVCLGFNLPKLTVLVVAQNNL--------------------------TGFLPQSLSNAS--KLEWLELNENHFSGQVR 296 (973)
Q Consensus 245 ~ip~~~~~~l~~L~~L~Ls~N~l--------------------------~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~~ 296 (973)
..|.. + ...+|+.|++++|.. ....+..|..+. +|++|++++|++++..+
T Consensus 194 ~~~~~-~-~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~ 271 (606)
T 3t6q_A 194 IEPGA-F-DSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISS 271 (606)
T ss_dssp ECTTT-T-TTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCT
T ss_pred cChhH-h-hhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCH
Confidence 33333 2 345566666665531 111222333333 78999999999999888
Q ss_pred ccccCcccccceecccccCCCCCCCChhhhhhhcccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCccccCCCc
Q 039720 297 INFNSLPNLSKLYLGRNNLGTRTSTDLDFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPP 376 (973)
Q Consensus 297 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~ 376 (973)
..|..+++|++|+|++|+++.++.. +..+++|++|++++|++. +..|.
T Consensus 272 ~~~~~l~~L~~L~l~~n~l~~lp~~-------l~~l~~L~~L~l~~n~l~-------------------------~~~~~ 319 (606)
T 3t6q_A 272 NTFHCFSGLQELDLTATHLSELPSG-------LVGLSTLKKLVLSANKFE-------------------------NLCQI 319 (606)
T ss_dssp TTTTTCTTCSEEECTTSCCSCCCSS-------CCSCTTCCEEECTTCCCS-------------------------BGGGG
T ss_pred HHhccccCCCEEeccCCccCCCChh-------hcccccCCEEECccCCcC-------------------------cCchh
Confidence 8899999999999999998865542 456667777777666555 34455
Q ss_pred cccCCCCcCEEEcccccCCCCCCc-cccCCCCCCeEEccCcccCCCC--CCccCCcCccceEEcCCCccccccccccccc
Q 039720 377 EIRNLFNLNGLGLEYNQLTGTIPP-AIGELRNLQYLGLVGNNIRGII--PDPIGNLTLLNVLQLGFNKLQGSIPSYLGKC 453 (973)
Q Consensus 377 ~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 453 (973)
.+..+++|++|++++|.+.+.+|. .+..+++|++|++++|++.+.. +..+..+++|++|++++|++++..|..+..+
T Consensus 320 ~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 399 (606)
T 3t6q_A 320 SASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKEC 399 (606)
T ss_dssp CGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTC
T ss_pred hhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCC
Confidence 667778888888888888755554 4888888888888888888665 7778888888888888888887778888888
Q ss_pred cccccccccCcccccCCCcccc-ccccccceeeccCCcccccCCcccccccccceeccccCccccc---ccccccCccch
Q 039720 454 QNLMQLSAPNNKLNGTLPPQIF-GITTLSKLLDLSENHLSGSIPLEVGNLKSLVQLDISRNNFSNE---IPVTLSACTTL 529 (973)
Q Consensus 454 ~~L~~L~l~~N~l~~~~p~~~~-~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~---~p~~~~~l~~L 529 (973)
++|+.|++++|++.+..|...+ .+..+ +.|++++|.+++..|..++.+++|+.|++++|++++. .+..+..+++|
T Consensus 400 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L 478 (606)
T 3t6q_A 400 PQLELLDLAFTRLKVKDAQSPFQNLHLL-KVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRL 478 (606)
T ss_dssp TTCSEEECTTCCEECCTTCCTTTTCTTC-CEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTC
T ss_pred ccCCeEECCCCcCCCcccchhhhCcccC-CEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCc
Confidence 8888888888888876666533 44444 5888999988888888888899999999999998863 33568888999
Q ss_pred hhhcccCcccccccccchhhhccCCeecCCCCccccccCCCCCCCCccceEeccCCcCcCcCCCC-CCCCCccccccccC
Q 039720 530 EYLLMQGNSFNGSIPQSLNALKSIKELDLSCNNLSGQIPIHLGNLPFLEYLNLSYNHFEGKVPKK-GVFSNETRISLTGN 608 (973)
Q Consensus 530 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~l~~~~N 608 (973)
++|++++|++++..|..+..+++|++|+|++|++++..|..+..++.| .|++++|++++.+|.. ..+++++.+++.+|
T Consensus 479 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 557 (606)
T 3t6q_A 479 EILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQN 557 (606)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTC
T ss_pred cEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCC
Confidence 999999999998888889999999999999999998888899999999 9999999999887764 45678888999999
Q ss_pred ccccCCCC
Q 039720 609 EQFCGGLG 616 (973)
Q Consensus 609 ~~~cg~~~ 616 (973)
||.|+|..
T Consensus 558 ~~~c~c~~ 565 (606)
T 3t6q_A 558 PLDCTCSN 565 (606)
T ss_dssp CEECSGGG
T ss_pred CccccCCc
Confidence 99998753
No 6
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=6.3e-56 Score=543.90 Aligned_cols=533 Identities=21% Similarity=0.191 Sum_probs=456.9
Q ss_pred EEEeeccCccccccCCCcCCCCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccc
Q 039720 66 KLDLESQNIGGFLSPYIGNLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNN 145 (973)
Q Consensus 66 ~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~ 145 (973)
.+|.++++++ .+|..+. +++++|+|++|++++..|..|+++++|++|+|++|.+++..|..++++++|++|++++|+
T Consensus 8 ~~~cs~~~L~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 84 (680)
T 1ziw_A 8 VADCSHLKLT-QVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNE 84 (680)
T ss_dssp EEECCSSCCS-SCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSC
T ss_pred eeECCCCCcc-ccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCc
Confidence 5799999986 5787665 799999999999998777789999999999999999999889999999999999999999
Q ss_pred cccchhhhhccccccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCcc
Q 039720 146 LVGEIQAIIGNWLKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLS 225 (973)
Q Consensus 146 ~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~ 225 (973)
+.+..+..|+++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..++++++|++|++++|.+++..+..
T Consensus 85 l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 164 (680)
T 1ziw_A 85 LSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEE 164 (680)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHH
T ss_pred cCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHH
Confidence 99877778999999999999999999877889999999999999999999999999999999999999999999887776
Q ss_pred cc--CCCCCcEEEccCCccccCCCccccc--------------------------CCCCCcEEEccCCcccccCCccccC
Q 039720 226 VC--NISSLDEAYLFKNRFKGSLPVCLGF--------------------------NLPKLTVLVVAQNNLTGFLPQSLSN 277 (973)
Q Consensus 226 ~~--~l~~L~~L~L~~N~l~~~ip~~~~~--------------------------~l~~L~~L~Ls~N~l~~~~p~~~~~ 277 (973)
+. .+++|++|++++|++++..|..+.. ..++|+.|++++|.+++..|..|.+
T Consensus 165 ~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~ 244 (680)
T 1ziw_A 165 LDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLG 244 (680)
T ss_dssp HGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGG
T ss_pred hhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhc
Confidence 54 5689999999999999666654331 1267888999999999988999988
Q ss_pred CCC--CCEEEccCCcccccCcccccCcccccceecccccCCCCCCCChhhhhhhcccccceeeccccccccCC-----CC
Q 039720 278 ASK--LEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNLGTRTSTDLDFITLLTNCSKLVKLGLVFNRFGGA-----LP 350 (973)
Q Consensus 278 l~~--L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~-----~p 350 (973)
++. |++|+|++|++++..+..|..+++|++|+|++|++..+... .+..+++|+.|++++|...+. +|
T Consensus 245 l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~------~~~~l~~L~~L~L~~~~~~~~~~~~~lp 318 (680)
T 1ziw_A 245 LKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSH------SLHGLFNVRYLNLKRSFTKQSISLASLP 318 (680)
T ss_dssp GGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTT------TTTTCTTCCEEECTTCBCCC------CC
T ss_pred cCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChh------hhcCCCCccEEeccchhhhccccccccc
Confidence 865 99999999999998889999999999999999999875443 456788999999998776653 33
Q ss_pred h----hhhhhhhhhhHhhhcCCccccCCCccccCCCCcCEEEcccccCCC--CCCccccCC--CCCCeEEccCcccCCCC
Q 039720 351 H----SIANLSTTMTLIAMAGNQISGTIPPEIRNLFNLNGLGLEYNQLTG--TIPPAIGEL--RNLQYLGLVGNNIRGII 422 (973)
Q Consensus 351 ~----~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l--~~L~~L~L~~N~l~~~~ 422 (973)
. .+.. ...++.|++++|++++..+..|..+++|++|+|++|.+.. ..+..|..+ ++|+.|++++|++++..
T Consensus 319 ~i~~~~~~~-l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~ 397 (680)
T 1ziw_A 319 KIDDFSFQW-LKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIE 397 (680)
T ss_dssp EECTTTTTT-CTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEEC
T ss_pred ccChhhccc-CCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEC
Confidence 2 3333 3678999999999999888899999999999999998543 233344443 58999999999999999
Q ss_pred CCccCCcCccceEEcCCCccccccc-cccccccccccccccCcccccCCCccccccccccceeeccCCccc--ccCCccc
Q 039720 423 PDPIGNLTLLNVLQLGFNKLQGSIP-SYLGKCQNLMQLSAPNNKLNGTLPPQIFGITTLSKLLDLSENHLS--GSIPLEV 499 (973)
Q Consensus 423 p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~--~~~p~~~ 499 (973)
|..|..+++|++|++++|++++.+| ..+..+++|++|++++|++.+..+..+..+..+ +.|++++|.++ +.+|..+
T Consensus 398 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L-~~L~l~~n~l~~~~~~p~~~ 476 (680)
T 1ziw_A 398 SDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSL-QRLMLRRVALKNVDSSPSPF 476 (680)
T ss_dssp TTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTC-CEEECTTSCCBCTTCSSCTT
T ss_pred hhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCccc-ccchhccccccccccCCccc
Confidence 9999999999999999999987766 688999999999999999986555566555555 58999999987 5788999
Q ss_pred ccccccceeccccCcccccccccccCccchhhhcccCcccccccc--------cchhhhccCCeecCCCCccccccCCCC
Q 039720 500 GNLKSLVQLDISRNNFSNEIPVTLSACTTLEYLLMQGNSFNGSIP--------QSLNALKSIKELDLSCNNLSGQIPIHL 571 (973)
Q Consensus 500 ~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 571 (973)
..+++|+.|++++|++++..|..|.++++|++|+|++|++++..+ ..+..+++|++|+|++|+++...+..|
T Consensus 477 ~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~ 556 (680)
T 1ziw_A 477 QPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVF 556 (680)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred ccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHc
Confidence 999999999999999998888889999999999999999986432 237889999999999999994444568
Q ss_pred CCCCccceEeccCCcCcCcCCCC-CCCCCccccccccCc
Q 039720 572 GNLPFLEYLNLSYNHFEGKVPKK-GVFSNETRISLTGNE 609 (973)
Q Consensus 572 ~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~l~~~~N~ 609 (973)
..+++|+.|+|++|++++.++.. ..+++++.+++.+|.
T Consensus 557 ~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~ 595 (680)
T 1ziw_A 557 KDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNL 595 (680)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred ccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCc
Confidence 99999999999999999877764 457889999999984
No 7
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=4.4e-57 Score=553.98 Aligned_cols=487 Identities=18% Similarity=0.221 Sum_probs=359.5
Q ss_pred hhhcccccchhhHHHHHHHHhhccCCCcCCCCCCCCCC-----CC--Cce------------eeeEeeCCCCeEEEEEee
Q 039720 10 FWLYSRHATSHVKHATVTFNMQQLHDPLGVTKSWNNSI-----NL--CQW------------TGVTCGHRHQRVTKLDLE 70 (973)
Q Consensus 10 ~~~~~~~~~~~~~~~ll~~~~~~~~d~~~~l~sw~~~~-----~~--c~w------------~gv~C~~~~~~v~~l~l~ 70 (973)
..+...++...|++||++||++. .|| +|+.+. +| |.| .||+|+. +++|+.|+|+
T Consensus 259 ~~~~~~~~~~~d~~ALl~~k~~l-~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls 331 (876)
T 4ecn_A 259 IQLKETAEYIKDYKALKAIWEAL-DGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLA 331 (876)
T ss_dssp ECCCCCCHHHHHHHHHHHHHHHT-TGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECT
T ss_pred eeccccccchHHHHHHHHHHHHc-CCC-----CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECc
Confidence 34444555667899999999976 566 897544 55 999 9999986 6899999999
Q ss_pred ccCccccccCCCcCCCCCCEEEc-cCCCCCCCCCccc-------------------------------------------
Q 039720 71 SQNIGGFLSPYIGNLSFLRVINL-ANNSFHGQIPKEV------------------------------------------- 106 (973)
Q Consensus 71 ~~~l~g~~~~~l~~l~~L~~L~L-~~n~l~~~~p~~~------------------------------------------- 106 (973)
++++.|.+|+++++|++|++|+| ++|.++|..|...
T Consensus 332 ~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~ 411 (876)
T 4ecn_A 332 GFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRN 411 (876)
T ss_dssp TTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTC
T ss_pred cCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhC
Confidence 99999999999999999999999 8998887644221
Q ss_pred --------cccCCCCEEeee--cccCCCCCCcccccCCCccceEeccccccc-----------------chhhhhc--cc
Q 039720 107 --------GRLFRLETIVLS--NNSFSGKIPTNLSRCFNLIDFWVHTNNLVG-----------------EIQAIIG--NW 157 (973)
Q Consensus 107 --------~~l~~L~~L~Ls--~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~-----------------~~~~~~~--~l 157 (973)
.....++.+.+. +|.+++ +|..|+++++|+.|++++|++.+ .+|..++ ++
T Consensus 412 ~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L 490 (876)
T 4ecn_A 412 PEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNL 490 (876)
T ss_dssp TTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGC
T ss_pred ccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccC
Confidence 112234444444 388887 99999999999999999999998 3899987 99
Q ss_pred cccceeeccCCcccccCCCCCCCCCcccEEEccCCc-CCC-CCCCcccCCC-------ccceeccCCCCccccCCc--cc
Q 039720 158 LKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNK-LDG-RIPDSLGQLR-------NLNYLGTSENDFSGMFPL--SV 226 (973)
Q Consensus 158 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~~~~L~-------~L~~L~Ls~N~l~~~~p~--~~ 226 (973)
++|++|+|++|++.+.+|..|+++++|++|+|++|+ +++ .+|..+++++ +|++|+|++|+++ .+|. .+
T Consensus 491 ~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l 569 (876)
T 4ecn_A 491 KDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASL 569 (876)
T ss_dssp TTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHH
T ss_pred CCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhh
Confidence 999999999999999999999999999999999998 988 7888777666 9999999999999 7888 89
Q ss_pred cCCCCCcEEEccCCccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCC-CCEEEccCCcccccCcccccCccc-
Q 039720 227 CNISSLDEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASK-LEWLELNENHFSGQVRINFNSLPN- 304 (973)
Q Consensus 227 ~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~~~~~~~l~~- 304 (973)
+++++|++|+|++|+++ .+| .+ .++++|+.|+|++|.++ .+|..+.++++ |++|+|++|+++ .+|..+..++.
T Consensus 570 ~~L~~L~~L~Ls~N~l~-~lp-~~-~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~ 644 (876)
T 4ecn_A 570 QKMVKLGLLDCVHNKVR-HLE-AF-GTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVY 644 (876)
T ss_dssp TTCTTCCEEECTTSCCC-BCC-CC-CTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSS
T ss_pred hcCCCCCEEECCCCCcc-cch-hh-cCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccC
Confidence 99999999999999999 899 44 48999999999999999 78989999999 999999999999 56777877755
Q ss_pred -ccceecccccCCCCCCCChhhhhhhc--ccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCccccCCCcc-ccC
Q 039720 305 -LSKLYLGRNNLGTRTSTDLDFITLLT--NCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPE-IRN 380 (973)
Q Consensus 305 -L~~L~L~~N~l~~~~~~~~~~~~~l~--~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~-~~~ 380 (973)
|+.|+|++|++....+.-. ..+. .+.+|+.|++++|++. .+|.. +..
T Consensus 645 ~L~~L~Ls~N~l~g~ip~l~---~~l~~~~~~~L~~L~Ls~N~L~--------------------------~lp~~~~~~ 695 (876)
T 4ecn_A 645 VMGSVDFSYNKIGSEGRNIS---CSMDDYKGINASTVTLSYNEIQ--------------------------KFPTELFAT 695 (876)
T ss_dssp CEEEEECCSSCTTTTSSSCS---SCTTTCCCCCEEEEECCSSCCC--------------------------SCCHHHHHT
T ss_pred CCCEEECcCCcCCCccccch---hhhccccCCCcCEEEccCCcCC--------------------------ccCHHHHcc
Confidence 9999999999865322100 0000 1223444444433333 22222 224
Q ss_pred CCCcCEEEcccccCCCCCCccccCC--------CCCCeEEccCcccCCCCCCccC--CcCccceEEcCCCcccccccccc
Q 039720 381 LFNLNGLGLEYNQLTGTIPPAIGEL--------RNLQYLGLVGNNIRGIIPDPIG--NLTLLNVLQLGFNKLQGSIPSYL 450 (973)
Q Consensus 381 l~~L~~L~Ls~N~l~~~~p~~~~~l--------~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~ 450 (973)
+++|+.|+|++|+|+ .+|..+... ++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|++++ +|..+
T Consensus 696 l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l 772 (876)
T 4ecn_A 696 GSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQP 772 (876)
T ss_dssp TCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGG
T ss_pred CCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhh
Confidence 555666666666665 333332221 25666666666665 4555554 55666666666666654 55555
Q ss_pred ccccccccccccCcccccCCCccccccccccceeeccCCcccccCCcccccccccceeccccCcccccccccccCccchh
Q 039720 451 GKCQNLMQLSAPNNKLNGTLPPQIFGITTLSKLLDLSENHLSGSIPLEVGNLKSLVQLDISRNNFSNEIPVTLSACTTLE 530 (973)
Q Consensus 451 ~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~ 530 (973)
..+++|+.|++++|+ ++++|++.+.+|..+..+++|+.|+|++|++ +.+|..+. ++|+
T Consensus 773 ~~L~~L~~L~Ls~N~-------------------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~ 830 (876)
T 4ecn_A 773 LNSSQLKAFGIRHQR-------------------DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLY 830 (876)
T ss_dssp GGCTTCCEEECCCCB-------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSC
T ss_pred hcCCCCCEEECCCCC-------------------CcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCC
Confidence 566666666665554 3455777777777777777777777777777 46676655 4777
Q ss_pred hhcccCcccccccccchhhhccCCeecCCCCccc
Q 039720 531 YLLMQGNSFNGSIPQSLNALKSIKELDLSCNNLS 564 (973)
Q Consensus 531 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 564 (973)
.|+|++|++....+..+.....+..+.|.+|++.
T Consensus 831 ~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~ 864 (876)
T 4ecn_A 831 ILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQ 864 (876)
T ss_dssp EEECCSCTTCEEECGGGHHHHHTTCCEEECCTTS
T ss_pred EEECCCCCCCccChHHccccccchheeecCCCcc
Confidence 7777777777666666666666666666666654
No 8
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.9e-56 Score=541.10 Aligned_cols=529 Identities=18% Similarity=0.141 Sum_probs=415.1
Q ss_pred EEeeccCccccccCCCcCCCCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEeccccc
Q 039720 67 LDLESQNIGGFLSPYIGNLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNL 146 (973)
Q Consensus 67 l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~ 146 (973)
++.++++++ .+|..+. ++|++|+|++|++++..|..|+++++|++|+|++|.+++..|..|+++++|++|++++|.+
T Consensus 16 ~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l 92 (606)
T 3vq2_A 16 YQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPI 92 (606)
T ss_dssp EECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred eEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcc
Confidence 455556664 4666554 7888888888888877777888888888888888888877788888888888888888888
Q ss_pred ccchhhhhccccccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCC-CCCCcccCCCccceeccCCCCccccCCcc
Q 039720 147 VGEIQAIIGNWLKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDG-RIPDSLGQLRNLNYLGTSENDFSGMFPLS 225 (973)
Q Consensus 147 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~ 225 (973)
.+..|..|+++++|++|+|++|++++..|..|+++++|++|++++|++++ .+|..|+++++|++|++++|++++..|..
T Consensus 93 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~ 172 (606)
T 3vq2_A 93 QSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVND 172 (606)
T ss_dssp CCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTT
T ss_pred cccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhh
Confidence 88888888888888888888888887777888888888888888888875 56888888888888888888888888887
Q ss_pred ccCCCCCc----EEEccCCccccCCCcccccCCCCCcEEEccCCccc-ccCCccccCCCCCCEEEccCCcccc------c
Q 039720 226 VCNISSLD----EAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLT-GFLPQSLSNASKLEWLELNENHFSG------Q 294 (973)
Q Consensus 226 ~~~l~~L~----~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~------~ 294 (973)
+..+++|+ +|++++|+++ .+|...+ ...+|+.|++++|.++ +..|..+.+++.|+.+++..+.+.+ .
T Consensus 173 ~~~l~~L~~~l~~L~l~~n~l~-~~~~~~~-~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~ 250 (606)
T 3vq2_A 173 LQFLRENPQVNLSLDMSLNPID-FIQDQAF-QGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIF 250 (606)
T ss_dssp THHHHHCTTCCCEEECTTCCCC-EECTTTT-TTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCC
T ss_pred hhhhhccccccceeeccCCCcc-eeCcccc-cCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCccccc
Confidence 77776665 7888888887 5666666 3448888888888886 4667778888888888875544432 1
Q ss_pred CcccccCccc--ccceec-ccccCCCCCCCChhhhhhhcccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCccc
Q 039720 295 VRINFNSLPN--LSKLYL-GRNNLGTRTSTDLDFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQIS 371 (973)
Q Consensus 295 ~~~~~~~l~~--L~~L~L-~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~ 371 (973)
.+..+.++.. ++.+++ ..|.+.... ..+..+++|+.|++++|.+. .+| .+..+ ..++.|++++|++
T Consensus 251 ~~~~~~~l~~l~l~~l~l~~~~~~~~~~-------~~~~~l~~L~~L~l~~~~~~-~l~-~l~~~-~~L~~L~l~~n~l- 319 (606)
T 3vq2_A 251 EPSIMEGLCDVTIDEFRLTYTNDFSDDI-------VKFHCLANVSAMSLAGVSIK-YLE-DVPKH-FKWQSLSIIRCQL- 319 (606)
T ss_dssp CGGGGTTGGGSEEEEEEECCCTTCCGGG-------GSCGGGTTCSEEEEESCCCC-CCC-CCCTT-CCCSEEEEESCCC-
T ss_pred ChHHhhhhhhccHhheeccccccccccc-------cccccCCCCCEEEecCccch-hhh-hcccc-ccCCEEEcccccC-
Confidence 1222222222 333444 333333211 11556667777777777664 344 33332 4677777777777
Q ss_pred cCCCccccCCCCcCEEEcccccCCCCCCccccCCCCCCeEEccCcccCCC--CCCccCCcCccceEEcCCCccccccccc
Q 039720 372 GTIPPEIRNLFNLNGLGLEYNQLTGTIPPAIGELRNLQYLGLVGNNIRGI--IPDPIGNLTLLNVLQLGFNKLQGSIPSY 449 (973)
Q Consensus 372 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 449 (973)
+.+| .+ .+++|+.|++++|+..+.+ .+..+++|++|++++|++++. .|..+..+++|++|++++|.++ .+|..
T Consensus 320 ~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~-~~~~~ 394 (606)
T 3vq2_A 320 KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSAN 394 (606)
T ss_dssp SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEE-EECCC
T ss_pred cccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccc-cchhh
Confidence 5777 45 8899999999999655433 677889999999999998866 3778888999999999999988 47788
Q ss_pred cccccccccccccCcccccCCC-ccccccccccceeeccCCcccccCCcccccccccceeccccCcccc-cccccccCcc
Q 039720 450 LGKCQNLMQLSAPNNKLNGTLP-PQIFGITTLSKLLDLSENHLSGSIPLEVGNLKSLVQLDISRNNFSN-EIPVTLSACT 527 (973)
Q Consensus 450 ~~~l~~L~~L~l~~N~l~~~~p-~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~-~~p~~~~~l~ 527 (973)
+..+++|+.|++++|++.+..| ..+..+..+ +.|++++|.+++..|..++.+++|+.|++++|++++ .+|..|+.++
T Consensus 395 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~ 473 (606)
T 3vq2_A 395 FMGLEELQHLDFQHSTLKRVTEFSAFLSLEKL-LYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTT 473 (606)
T ss_dssp CTTCTTCCEEECTTSEEESTTTTTTTTTCTTC-CEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCT
T ss_pred ccCCCCCCeeECCCCccCCccChhhhhccccC-CEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCC
Confidence 8999999999999999987766 345555555 589999999998889999999999999999999987 4788899999
Q ss_pred chhhhcccCcccccccccchhhhccCCeecCCCCccccccCCCCCCCCccceEeccCCcCcCcCCCCCCCC-Cccccccc
Q 039720 528 TLEYLLMQGNSFNGSIPQSLNALKSIKELDLSCNNLSGQIPIHLGNLPFLEYLNLSYNHFEGKVPKKGVFS-NETRISLT 606 (973)
Q Consensus 528 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~-~~~~l~~~ 606 (973)
+|+.|+|++|++++..|..+..+++|++|+|++|++++.+|..+..+++|++|++++|++++.++....++ +++.+++.
T Consensus 474 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~ 553 (606)
T 3vq2_A 474 NLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLT 553 (606)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECC
T ss_pred CCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEcc
Confidence 99999999999998888899999999999999999998889999999999999999999997666555565 58899999
Q ss_pred cCccccCCCCC
Q 039720 607 GNEQFCGGLGE 617 (973)
Q Consensus 607 ~N~~~cg~~~~ 617 (973)
+|||.|++...
T Consensus 554 ~N~~~c~c~~~ 564 (606)
T 3vq2_A 554 NNSVACICEHQ 564 (606)
T ss_dssp SCCCCCSSTTH
T ss_pred CCCcccCCccH
Confidence 99999988753
No 9
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.1e-55 Score=534.44 Aligned_cols=527 Identities=20% Similarity=0.191 Sum_probs=453.6
Q ss_pred CCCce----eeeEeeCC---------CCeEEEEEeeccCccccccCCCcCCCCCCEEEccCCCCCCCCCccccccCCCCE
Q 039720 48 NLCQW----TGVTCGHR---------HQRVTKLDLESQNIGGFLSPYIGNLSFLRVINLANNSFHGQIPKEVGRLFRLET 114 (973)
Q Consensus 48 ~~c~w----~gv~C~~~---------~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 114 (973)
+.|.| ..|.|... ..+++.|+|+++.+.+..+..+.++++|++|+|++|++++..|..|+++++|++
T Consensus 5 ~~c~~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~ 84 (606)
T 3vq2_A 5 NPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSN 84 (606)
T ss_dssp -CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred CCceecCCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCE
Confidence 34655 35778642 246899999999999888889999999999999999999888889999999999
Q ss_pred EeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccceeeccCCcccc-cCCCCCCCCCcccEEEccCCc
Q 039720 115 IVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLYGNQLTG-QLPPSIGNLSALQTFDIAGNK 193 (973)
Q Consensus 115 L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~ 193 (973)
|+|++|.+++..|..|+++++|++|++++|.+.+..+..++++++|++|+|++|.+++ .+|..|+++++|++|++++|+
T Consensus 85 L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~ 164 (606)
T 3vq2_A 85 LILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNY 164 (606)
T ss_dssp EECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSC
T ss_pred eECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCc
Confidence 9999999998889999999999999999999999888899999999999999999986 579999999999999999999
Q ss_pred CCCCCCCcccCCCccc----eeccCCCCccccCCccccCCCCCcEEEccCCccccCCCcccccCCCCCcEEEccCCcccc
Q 039720 194 LDGRIPDSLGQLRNLN----YLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTG 269 (973)
Q Consensus 194 l~~~~p~~~~~L~~L~----~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~ 269 (973)
+++..|..|+.+++|+ +|++++|.+++..+..+... +|++|++++|.+.+......+.+++.|+.+++..+.+.+
T Consensus 165 l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~ 243 (606)
T 3vq2_A 165 IQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKD 243 (606)
T ss_dssp CCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTT
T ss_pred ceecChhhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhcccccccccccccccccc
Confidence 9988899999888876 79999999998777777665 999999999999754433344589999999886554432
Q ss_pred ------cCCccccCCC--CCCEEEc-cCCcccccCcccccCcccccceecccccCCCCCCCChhhhhhhcccccceeecc
Q 039720 270 ------FLPQSLSNAS--KLEWLEL-NENHFSGQVRINFNSLPNLSKLYLGRNNLGTRTSTDLDFITLLTNCSKLVKLGL 340 (973)
Q Consensus 270 ------~~p~~~~~l~--~L~~L~L-s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l 340 (973)
..+..+.++. .++.+++ ..|.+++..+. |..+++|+.|++++|.+..++ .+..+++|+.|++
T Consensus 244 ~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~l~--------~l~~~~~L~~L~l 314 (606)
T 3vq2_A 244 ERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKYLE--------DVPKHFKWQSLSI 314 (606)
T ss_dssp SCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCCCC--------CCCTTCCCSEEEE
T ss_pred CCcccccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccchhhh--------hccccccCCEEEc
Confidence 1122222222 4566666 67778877776 888888888888888887654 3566788888888
Q ss_pred ccccccCCCChhhhhhhhhhhHhhhcCCccccCCCccccCCCCcCEEEcccccCCCC--CCccccCCCCCCeEEccCccc
Q 039720 341 VFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEIRNLFNLNGLGLEYNQLTGT--IPPAIGELRNLQYLGLVGNNI 418 (973)
Q Consensus 341 ~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~L~~N~l 418 (973)
++|++ +.+|. + ..+.++.|++++|...+.. .+..+++|++|+|++|++++. +|..+..+++|++|++++|.+
T Consensus 315 ~~n~l-~~lp~-~--~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l 388 (606)
T 3vq2_A 315 IRCQL-KQFPT-L--DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGA 388 (606)
T ss_dssp ESCCC-SSCCC-C--CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSE
T ss_pred ccccC-ccccc-C--CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcc
Confidence 88888 67773 3 3467888888888655444 677999999999999999876 488999999999999999999
Q ss_pred CCCCCCccCCcCccceEEcCCCccccccc-cccccccccccccccCcccccCCCccccccccccceeeccCCcccc-cCC
Q 039720 419 RGIIPDPIGNLTLLNVLQLGFNKLQGSIP-SYLGKCQNLMQLSAPNNKLNGTLPPQIFGITTLSKLLDLSENHLSG-SIP 496 (973)
Q Consensus 419 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~-~~p 496 (973)
.+ +|..+..+++|++|++++|++.+..| ..+..+++|+.|++++|++.+..|..+..+..+. .|++++|++++ .+|
T Consensus 389 ~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~-~L~l~~n~l~~~~~~ 466 (606)
T 3vq2_A 389 II-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLN-TLKMAGNSFKDNTLS 466 (606)
T ss_dssp EE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCC-EEECTTCEEGGGEEC
T ss_pred cc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCC-EEECCCCcCCCcchH
Confidence 85 66889999999999999999998877 7899999999999999999988888887777775 99999999998 479
Q ss_pred cccccccccceeccccCcccccccccccCccchhhhcccCcccccccccchhhhccCCeecCCCCccccccCCCCCCCC-
Q 039720 497 LEVGNLKSLVQLDISRNNFSNEIPVTLSACTTLEYLLMQGNSFNGSIPQSLNALKSIKELDLSCNNLSGQIPIHLGNLP- 575 (973)
Q Consensus 497 ~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~- 575 (973)
..++.+++|+.|++++|++++..|..|.++++|+.|+|++|++++.+|..+..+++|++|||++|+|+ .+|..+..++
T Consensus 467 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~ 545 (606)
T 3vq2_A 467 NVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPK 545 (606)
T ss_dssp SCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCT
T ss_pred HhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 7888899997
Q ss_pred ccceEeccCCcCcCcCCC
Q 039720 576 FLEYLNLSYNHFEGKVPK 593 (973)
Q Consensus 576 ~L~~L~ls~N~l~~~~p~ 593 (973)
+|++|++++|++.+..+.
T Consensus 546 ~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 546 SLAFFNLTNNSVACICEH 563 (606)
T ss_dssp TCCEEECCSCCCCCSSTT
T ss_pred cCcEEEccCCCcccCCcc
Confidence 599999999999987774
No 10
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=4.9e-55 Score=546.43 Aligned_cols=519 Identities=19% Similarity=0.213 Sum_probs=374.3
Q ss_pred CceeeeEeeCCCCeEEEEEeeccCccccccCCCcCCCCCCEEEccCCCCCCCC-CccccccCCCCEEeeecccCCCCCCc
Q 039720 50 CQWTGVTCGHRHQRVTKLDLESQNIGGFLSPYIGNLSFLRVINLANNSFHGQI-PKEVGRLFRLETIVLSNNSFSGKIPT 128 (973)
Q Consensus 50 c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~Ls~n~l~~~~p~ 128 (973)
|.|..|-+ ...+++.|||++|.+.+..+..+.++++|++|+|++|.+.+.+ |..|+++++|++|+|++|.+++..|.
T Consensus 14 ~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 14 CNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 45666655 3346777777777777666667777777777777777655555 56677777777777777777766677
Q ss_pred ccccCCCccceEecccccccchhhh--hccccccceeeccCCcccccCC-CCCCCCCcccEEEccCCcCCCCCCCcccCC
Q 039720 129 NLSRCFNLIDFWVHTNNLVGEIQAI--IGNWLKIERLSLYGNQLTGQLP-PSIGNLSALQTFDIAGNKLDGRIPDSLGQL 205 (973)
Q Consensus 129 ~~~~l~~L~~L~l~~n~~~~~~~~~--~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L 205 (973)
.|+++++|++|++++|.+.+.+|.. ++++++|++|+|++|.+++..+ ..|+++++|++|+|++|++++..+..+..+
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l 171 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPL 171 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHH
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccc
Confidence 7777777777777777777655554 6777777777777777765543 456777777777777777776667777666
Q ss_pred --CccceeccCCCCccccCCccccCCCC------CcEEEccCCccccCCCcccccC--CCCCcEEEccC---------Cc
Q 039720 206 --RNLNYLGTSENDFSGMFPLSVCNISS------LDEAYLFKNRFKGSLPVCLGFN--LPKLTVLVVAQ---------NN 266 (973)
Q Consensus 206 --~~L~~L~Ls~N~l~~~~p~~~~~l~~------L~~L~L~~N~l~~~ip~~~~~~--l~~L~~L~Ls~---------N~ 266 (973)
++|+.|+++.|.+.+..|..+..+.+ |+.|++++|++++.+|..+... .++++.|.++. |.
T Consensus 172 ~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~ 251 (844)
T 3j0a_A 172 QGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHN 251 (844)
T ss_dssp HHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSS
T ss_pred cCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccc
Confidence 67777777777777666666555554 7777777777766666555432 24566666652 23
Q ss_pred ccccCCccccCC--CCCCEEEccCCcccccCcccccCcccccceecccccCCCCCCCChhhhhhhcccccceeecccccc
Q 039720 267 LTGFLPQSLSNA--SKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNLGTRTSTDLDFITLLTNCSKLVKLGLVFNR 344 (973)
Q Consensus 267 l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~N~ 344 (973)
+.+..+..|.++ ++|++|+|++|.+++..+..|..+++|+.|+|++|+++.+... .+..+++|++|++
T Consensus 252 l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~------~~~~l~~L~~L~L---- 321 (844)
T 3j0a_A 252 IKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADE------AFYGLDNLQVLNL---- 321 (844)
T ss_dssp STTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTT------TTTTCSSCCEEEE----
T ss_pred cCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChH------HhcCCCCCCEEEC----
Confidence 333334445444 5677777777777766666677777777777777766654332 2334445555555
Q ss_pred ccCCCChhhhhhhhhhhHhhhcCCccccCCCccccCCCCcCEEEcccccCCCCCCccccCCCCCCeEEccCcccCCCCCC
Q 039720 345 FGGALPHSIANLSTTMTLIAMAGNQISGTIPPEIRNLFNLNGLGLEYNQLTGTIPPAIGELRNLQYLGLVGNNIRGIIPD 424 (973)
Q Consensus 345 l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 424 (973)
++|++++..|..|..+++|+.|+|++|++++..+..|..+++|++|+|++|.+++.
T Consensus 322 ---------------------s~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i--- 377 (844)
T 3j0a_A 322 ---------------------SYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI--- 377 (844)
T ss_dssp ---------------------ESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC---
T ss_pred ---------------------CCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc---
Confidence 45555556677888888999999999999888888888899999999999988743
Q ss_pred ccCCcCccceEEcCCCccccccccccccccccccccccCcccccCCCcc--ccccccccceeeccCCcccccCCc-cccc
Q 039720 425 PIGNLTLLNVLQLGFNKLQGSIPSYLGKCQNLMQLSAPNNKLNGTLPPQ--IFGITTLSKLLDLSENHLSGSIPL-EVGN 501 (973)
Q Consensus 425 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~~~l~~~L~Ls~N~l~~~~p~-~~~~ 501 (973)
..+++|+.|++++|+++ .+|.. ..+++.|++++|++.+ ++.. +..+..+ +.|+|++|++++..+. .+..
T Consensus 378 --~~~~~L~~L~l~~N~l~-~l~~~---~~~l~~L~ls~N~l~~-l~~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~~~~~ 449 (844)
T 3j0a_A 378 --HFIPSIPDIFLSGNKLV-TLPKI---NLTANLIHLSENRLEN-LDILYFLLRVPHL-QILILNQNRFSSCSGDQTPSE 449 (844)
T ss_dssp --SSCCSCSEEEEESCCCC-CCCCC---CTTCCEEECCSCCCCS-STTHHHHTTCTTC-CEEEEESCCCCCCCSSSSSCS
T ss_pred --cCCCCcchhccCCCCcc-ccccc---ccccceeecccCcccc-CchhhhhhcCCcc-ceeeCCCCccccccccccccc
Confidence 23778889999999988 55644 4578888999998884 3322 2244444 4899999999865443 3566
Q ss_pred ccccceeccccCccc-----ccccccccCccchhhhcccCcccccccccchhhhccCCeecCCCCccccccCCCCCCCCc
Q 039720 502 LKSLVQLDISRNNFS-----NEIPVTLSACTTLEYLLMQGNSFNGSIPQSLNALKSIKELDLSCNNLSGQIPIHLGNLPF 576 (973)
Q Consensus 502 l~~L~~L~ls~N~l~-----~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 576 (973)
+++|+.|+|++|.++ +..|..|.++++|+.|+|++|+|++..|..+..+++|+.|+|++|+|++..|..+. ++
T Consensus 450 ~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~ 527 (844)
T 3j0a_A 450 NPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--AN 527 (844)
T ss_dssp CTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SC
T ss_pred CCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--cc
Confidence 789999999999987 44556788999999999999999988888899999999999999999976666665 88
Q ss_pred cceEeccCCcCcCcCCCCCCCCCccccccccCccccCCCC
Q 039720 577 LEYLNLSYNHFEGKVPKKGVFSNETRISLTGNEQFCGGLG 616 (973)
Q Consensus 577 L~~L~ls~N~l~~~~p~~~~~~~~~~l~~~~N~~~cg~~~ 616 (973)
|+.|+|++|++++.+|.. |.+++.+++.+|||.|+|..
T Consensus 528 L~~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 528 LEILDISRNQLLAPNPDV--FVSLSVLDITHNKFICECEL 565 (844)
T ss_dssp CCEEEEEEECCCCCCSCC--CSSCCEEEEEEECCCCSSSC
T ss_pred ccEEECCCCcCCCCChhH--hCCcCEEEecCCCccccccc
Confidence 999999999999998865 77889999999999998864
No 11
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=8.6e-53 Score=509.05 Aligned_cols=478 Identities=19% Similarity=0.171 Sum_probs=402.4
Q ss_pred cCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccceeeccCCccccc
Q 039720 94 ANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLYGNQLTGQ 173 (973)
Q Consensus 94 ~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 173 (973)
++..++ .+|..+.. ++++|+|++|.+++..|..|+++++|++|++++|++.+..|..|.++++|++|+|++|++++.
T Consensus 20 ~~~~l~-~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 96 (606)
T 3t6q_A 20 ENLGLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFM 96 (606)
T ss_dssp TTSCCS-SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEE
T ss_pred CCCCcc-cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCccccc
Confidence 334444 56766643 799999999999988899999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccCCccccCCCcccccC
Q 039720 174 LPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFKGSLPVCLGFN 253 (973)
Q Consensus 174 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~ 253 (973)
.|..|+++++|++|++++|++++..|..|+++++|++|++++|++++..+..+..+++|++|++++|++++..|..+. .
T Consensus 97 ~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~ 175 (606)
T 3t6q_A 97 AETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMS-S 175 (606)
T ss_dssp CTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHH-T
T ss_pred ChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhh-h
Confidence 999999999999999999999977788999999999999999999986656666699999999999999955555554 8
Q ss_pred CCCCc--EEEccCCcccccCCccccCCCCCCEEEccCCccc--------------------------ccCcccccCcc--
Q 039720 254 LPKLT--VLVVAQNNLTGFLPQSLSNASKLEWLELNENHFS--------------------------GQVRINFNSLP-- 303 (973)
Q Consensus 254 l~~L~--~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--------------------------~~~~~~~~~l~-- 303 (973)
+++|+ .|++++|.+++..|..|.. .+|++|++++|... .+.+..|.++.
T Consensus 176 l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~ 254 (606)
T 3t6q_A 176 LQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEM 254 (606)
T ss_dssp TTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGS
T ss_pred hcccceeEEecCCCccCccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcC
Confidence 99999 9999999999888877655 68999999988611 11122222222
Q ss_pred cccceecccccCCCCCCCChhhhhhhcccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCccccCCCccccCCCC
Q 039720 304 NLSKLYLGRNNLGTRTSTDLDFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEIRNLFN 383 (973)
Q Consensus 304 ~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~ 383 (973)
+|+.|++++|.++.++... +.++++ ++.|++++|+++ .+|..+..+++
T Consensus 255 ~L~~L~l~~n~l~~~~~~~------~~~l~~-------------------------L~~L~l~~n~l~-~lp~~l~~l~~ 302 (606)
T 3t6q_A 255 SVESINLQKHYFFNISSNT------FHCFSG-------------------------LQELDLTATHLS-ELPSGLVGLST 302 (606)
T ss_dssp EEEEEECTTCCCSSCCTTT------TTTCTT-------------------------CSEEECTTSCCS-CCCSSCCSCTT
T ss_pred ceeEEEeecCccCccCHHH------hccccC-------------------------CCEEeccCCccC-CCChhhccccc
Confidence 4555555555555443321 233444 455555555555 67888999999
Q ss_pred cCEEEcccccCCCCCCccccCCCCCCeEEccCcccCCCCCC-ccCCcCccceEEcCCCcccccc--cccccccccccccc
Q 039720 384 LNGLGLEYNQLTGTIPPAIGELRNLQYLGLVGNNIRGIIPD-PIGNLTLLNVLQLGFNKLQGSI--PSYLGKCQNLMQLS 460 (973)
Q Consensus 384 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~ 460 (973)
|++|++++|++++..|..+..+++|++|++++|.+.+.+|. .+..+++|++|++++|++++.. |..+..+++|++|+
T Consensus 303 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~ 382 (606)
T 3t6q_A 303 LKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLN 382 (606)
T ss_dssp CCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEE
T ss_pred CCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEE
Confidence 99999999999988899999999999999999999876665 5999999999999999999766 78899999999999
Q ss_pred ccCcccccCCCccccccccccceeeccCCcccccCCcc-cccccccceeccccCcccccccccccCccchhhhcccCccc
Q 039720 461 APNNKLNGTLPPQIFGITTLSKLLDLSENHLSGSIPLE-VGNLKSLVQLDISRNNFSNEIPVTLSACTTLEYLLMQGNSF 539 (973)
Q Consensus 461 l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 539 (973)
+++|++.+..|..+..+..+ +.|++++|++++..|.. +..+++|+.|++++|.+++..|..+.++++|++|++++|++
T Consensus 383 l~~n~l~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 461 (606)
T 3t6q_A 383 LSYNEPLSLKTEAFKECPQL-ELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHF 461 (606)
T ss_dssp CCSCSCEEECTTTTTTCTTC-SEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBC
T ss_pred CCCCcCCcCCHHHhcCCccC-CeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCC
Confidence 99999997777777777766 49999999999876654 89999999999999999999999999999999999999999
Q ss_pred ccc---cccchhhhccCCeecCCCCccccccCCCCCCCCccceEeccCCcCcCcCCCC-CCCCCccccccccCcc
Q 039720 540 NGS---IPQSLNALKSIKELDLSCNNLSGQIPIHLGNLPFLEYLNLSYNHFEGKVPKK-GVFSNETRISLTGNEQ 610 (973)
Q Consensus 540 ~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~l~~~~N~~ 610 (973)
++. .+..+..+++|++|+|++|++++..|..+..+++|+.|+|++|++++.+|.. ..++++ .+++.+|..
T Consensus 462 ~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l 535 (606)
T 3t6q_A 462 PKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHI 535 (606)
T ss_dssp GGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCC
T ss_pred CccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcc
Confidence 873 2367899999999999999999988999999999999999999999988854 446666 788888854
No 12
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.6e-52 Score=500.56 Aligned_cols=498 Identities=17% Similarity=0.182 Sum_probs=391.9
Q ss_pred CCceeeeEeeCCCCeEEEEEeeccCccccccCCCcCCCCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCc
Q 039720 49 LCQWTGVTCGHRHQRVTKLDLESQNIGGFLSPYIGNLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPT 128 (973)
Q Consensus 49 ~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~ 128 (973)
.|.|.|| |+. ++++++ .+|+.+. ++|++|+|++|++++..|..|+++++|++|+|++|.+++..|.
T Consensus 3 ~C~~~~~-c~~----------~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~ 68 (549)
T 2z81_A 3 SCDASGV-CDG----------RSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGD 68 (549)
T ss_dssp EECTTSE-EEC----------TTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTT
T ss_pred cCCCCce-EEC----------CCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChh
Confidence 5999999 964 334554 5777664 7999999999999988889999999999999999999988889
Q ss_pred ccccCCCccceEecccccccchhhhhccccccceeeccCCcccc-cCCCCCCCCCcccEEEccCCcCCCCCC-CcccCCC
Q 039720 129 NLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLYGNQLTG-QLPPSIGNLSALQTFDIAGNKLDGRIP-DSLGQLR 206 (973)
Q Consensus 129 ~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~L~ 206 (973)
.|+++++|++|++++|.+.+..|..|+++++|++|+|++|.+++ ..|..|+++++|++|++++|++.+.+| ..|.+++
T Consensus 69 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~ 148 (549)
T 2z81_A 69 AFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLT 148 (549)
T ss_dssp TTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCC
T ss_pred hccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhccc
Confidence 99999999999999999999999999999999999999999986 467889999999999999999544555 6899999
Q ss_pred ccceeccCCCCccccCCccccCCCCCcEEEccCCccccCCCcccccCCCCCcEEEccCCcccccC--C-ccccCCCCCCE
Q 039720 207 NLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFL--P-QSLSNASKLEW 283 (973)
Q Consensus 207 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~--p-~~~~~l~~L~~ 283 (973)
+|++|++++|++++..|..+..+++|++|+++.|.+. .+|..++..+++|++|++++|.+++.. | .....+++|++
T Consensus 149 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~ 227 (549)
T 2z81_A 149 SLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKK 227 (549)
T ss_dssp EEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCE
T ss_pred ccCeeeccCCcccccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccc
Confidence 9999999999999999999999999999999999987 777777667999999999999999752 2 23456889999
Q ss_pred EEccCCcccccCcc----cccCcccccceecccccCCCCCCCChhhhhhhcccccceeeccccccccCCCChhhhhhhhh
Q 039720 284 LELNENHFSGQVRI----NFNSLPNLSKLYLGRNNLGTRTSTDLDFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTT 359 (973)
Q Consensus 284 L~Ls~N~l~~~~~~----~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~ 359 (973)
|++++|.+++..+. .+..+++|+.|++++|.+..+..........+..+.+|+.|.+..+.+.... .
T Consensus 228 L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~----~----- 298 (549)
T 2z81_A 228 LAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFY----L----- 298 (549)
T ss_dssp EEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGG----G-----
T ss_pred eeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhh----h-----
Confidence 99999999865443 3567789999999999887654332222334556677777777776543210 0
Q ss_pred hhHhhhcCCccccCCCccccCCCCcCEEEcccccCCCCCCccc-cCCCCCCeEEccCcccCCCCC---CccCCcCccceE
Q 039720 360 MTLIAMAGNQISGTIPPEIRNLFNLNGLGLEYNQLTGTIPPAI-GELRNLQYLGLVGNNIRGIIP---DPIGNLTLLNVL 435 (973)
Q Consensus 360 l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L 435 (973)
...++..+....+|+.|++++|+++ .+|..+ ..+++|++|+|++|++.+.+| ..++.+++|++|
T Consensus 299 -----------~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L 366 (549)
T 2z81_A 299 -----------FYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTL 366 (549)
T ss_dssp -----------SCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEE
T ss_pred -----------cccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEE
Confidence 0112223344567888888888887 566655 568888888888888887653 346778888888
Q ss_pred EcCCCccccccc--cccccccccccccccCcccccCCCccccccccccceeeccCCcccccCCcccccccccceeccccC
Q 039720 436 QLGFNKLQGSIP--SYLGKCQNLMQLSAPNNKLNGTLPPQIFGITTLSKLLDLSENHLSGSIPLEVGNLKSLVQLDISRN 513 (973)
Q Consensus 436 ~Ls~N~l~~~~p--~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N 513 (973)
++++|++++..+ ..+..+++|++|++++|+++ .+|..+..+..+ +.|++++|+++ .+|..+ .++|+.|++++|
T Consensus 367 ~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L-~~L~Ls~N~l~-~l~~~~--~~~L~~L~Ls~N 441 (549)
T 2z81_A 367 VLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKM-RFLNLSSTGIR-VVKTCI--PQTLEVLDVSNN 441 (549)
T ss_dssp ECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTC-CEEECTTSCCS-CCCTTS--CTTCSEEECCSS
T ss_pred EccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccc-cEEECCCCCcc-cccchh--cCCceEEECCCC
Confidence 888888875432 45778888888888888887 677766665555 47888888877 344333 257888888888
Q ss_pred cccccccccccCccchhhhcccCcccccccccchhhhccCCeecCCCCccccccCCCCCCCCccceEeccCCcCcCcCCC
Q 039720 514 NFSNEIPVTLSACTTLEYLLMQGNSFNGSIPQSLNALKSIKELDLSCNNLSGQIPIHLGNLPFLEYLNLSYNHFEGKVPK 593 (973)
Q Consensus 514 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 593 (973)
++++.+ .++++|++|+|++|+|+ .+|. ...+++|++|||++|++++.+|..+..+++|+.|++++|++.+..|.
T Consensus 442 ~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 442 NLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp CCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHH
T ss_pred Chhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCcc
Confidence 887542 46778888888888887 5665 45678888888888888877777788888888888888888777663
No 13
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=4.8e-51 Score=510.38 Aligned_cols=498 Identities=21% Similarity=0.175 Sum_probs=403.8
Q ss_pred EEeeccCccccccCCCcCCCCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCC-CcccccCCCccceEecccc
Q 039720 67 LDLESQNIGGFLSPYIGNLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKI-PTNLSRCFNLIDFWVHTNN 145 (973)
Q Consensus 67 l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~-p~~~~~l~~L~~L~l~~n~ 145 (973)
.|.++++++. +|. ..++|++|||++|++++..|..|+++++|++|+|++|.+.+.+ |..|+++++|++|++++|+
T Consensus 9 ~dcs~~~L~~-vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~ 84 (844)
T 3j0a_A 9 AFYRFCNLTQ-VPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSK 84 (844)
T ss_dssp EEESCCCSSC-CCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCC
T ss_pred EEccCCCCCC-CCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCc
Confidence 4566777764 565 5588999999999999888999999999999999999777777 7889999999999999999
Q ss_pred cccchhhhhccccccceeeccCCcccccCCCC--CCCCCcccEEEccCCcCCCCCC-CcccCCCccceeccCCCCccccC
Q 039720 146 LVGEIQAIIGNWLKIERLSLYGNQLTGQLPPS--IGNLSALQTFDIAGNKLDGRIP-DSLGQLRNLNYLGTSENDFSGMF 222 (973)
Q Consensus 146 ~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~~~~L~~L~~L~Ls~N~l~~~~ 222 (973)
+.+..|..|.++++|++|+|++|.+++.+|.. |+++++|++|+|++|++++..+ ..|+++++|++|+|++|.+++..
T Consensus 85 l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~ 164 (844)
T 3j0a_A 85 IYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVC 164 (844)
T ss_dssp CCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCC
T ss_pred CcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeC
Confidence 99888999999999999999999998766665 8899999999999999987655 57899999999999999998888
Q ss_pred CccccCC--CCCcEEEccCCccccCCCcccccCCC------CCcEEEccCCcccccCCccccCC---CCCCEEEccCCc-
Q 039720 223 PLSVCNI--SSLDEAYLFKNRFKGSLPVCLGFNLP------KLTVLVVAQNNLTGFLPQSLSNA---SKLEWLELNENH- 290 (973)
Q Consensus 223 p~~~~~l--~~L~~L~L~~N~l~~~ip~~~~~~l~------~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~Ls~N~- 290 (973)
+..+..+ ++|+.|+++.|.+.+.+|..+. .++ +|+.|++++|.+++..+..+... ++++.|+++++.
T Consensus 165 ~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~-~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~ 243 (844)
T 3j0a_A 165 EHELEPLQGKTLSFFSLAANSLYSRVSVDWG-KCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIM 243 (844)
T ss_dssp SGGGHHHHHCSSCCCEECCSBSCCCCCCCCC-SSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCC
T ss_pred HHHcccccCCccceEECCCCccccccccchh-hcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccc
Confidence 8888877 8888899999988877776554 333 38888888888887777766543 567777776433
Q ss_pred --------ccccCcccccCc--ccccceecccccCCCCCCCChhhhhhhcccccceeeccccccccCCCChhhhhhhhhh
Q 039720 291 --------FSGQVRINFNSL--PNLSKLYLGRNNLGTRTSTDLDFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTM 360 (973)
Q Consensus 291 --------l~~~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l 360 (973)
+.+.....|.++ ++|+.|+|++|.+. +..|..+..+ ..+
T Consensus 244 ~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~------------------------------~~~~~~~~~l-~~L 292 (844)
T 3j0a_A 244 GAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVF------------------------------SLNSRVFETL-KDL 292 (844)
T ss_dssp BCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCC------------------------------EECSCCSSSC-CCC
T ss_pred cccccccccCCCChhhhhccccCCccEEECCCCccc------------------------------ccChhhhhcC-CCC
Confidence 222333334333 34555555555544 3333333332 345
Q ss_pred hHhhhcCCccccCCCccccCCCCcCEEEcccccCCCCCCccccCCCCCCeEEccCcccCCCCCCccCCcCccceEEcCCC
Q 039720 361 TLIAMAGNQISGTIPPEIRNLFNLNGLGLEYNQLTGTIPPAIGELRNLQYLGLVGNNIRGIIPDPIGNLTLLNVLQLGFN 440 (973)
Q Consensus 361 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 440 (973)
+.|++++|++++..|..|..+++|++|+|++|++++..|..|..+++|++|+|++|++.+..+..|..+++|++|+|++|
T Consensus 293 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N 372 (844)
T 3j0a_A 293 KVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDN 372 (844)
T ss_dssp CEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETC
T ss_pred CEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCC
Confidence 55666666777777888999999999999999999999999999999999999999999888889999999999999999
Q ss_pred ccccccccccccccccccccccCcccccCCCccccccccccceeeccCCcccccC-CcccccccccceeccccCcccccc
Q 039720 441 KLQGSIPSYLGKCQNLMQLSAPNNKLNGTLPPQIFGITTLSKLLDLSENHLSGSI-PLEVGNLKSLVQLDISRNNFSNEI 519 (973)
Q Consensus 441 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~ls~N~l~~~~ 519 (973)
.+++ ++ .+++|+.|++++|++. .+|.... .++.|++++|++++.. +..+..+++|+.|+|++|++++..
T Consensus 373 ~l~~-i~----~~~~L~~L~l~~N~l~-~l~~~~~----~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~ 442 (844)
T 3j0a_A 373 ALTT-IH----FIPSIPDIFLSGNKLV-TLPKINL----TANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCS 442 (844)
T ss_dssp CSCC-CS----SCCSCSEEEEESCCCC-CCCCCCT----TCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCC
T ss_pred CCCc-cc----CCCCcchhccCCCCcc-ccccccc----ccceeecccCccccCchhhhhhcCCccceeeCCCCcccccc
Confidence 9983 33 3889999999999998 7776532 2358999999999642 234568999999999999999655
Q ss_pred cc-cccCccchhhhcccCcccc-----cccccchhhhccCCeecCCCCccccccCCCCCCCCccceEeccCCcCcCcCCC
Q 039720 520 PV-TLSACTTLEYLLMQGNSFN-----GSIPQSLNALKSIKELDLSCNNLSGQIPIHLGNLPFLEYLNLSYNHFEGKVPK 593 (973)
Q Consensus 520 p~-~~~~l~~L~~L~L~~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 593 (973)
+. .+..+++|+.|+|++|.++ +..+..|..+++|+.|+|++|+|++..|..+..+++|+.|+|++|++++.+|.
T Consensus 443 ~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~ 522 (844)
T 3j0a_A 443 GDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHN 522 (844)
T ss_dssp SSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCC
T ss_pred cccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChh
Confidence 43 4667899999999999997 44556788999999999999999999899999999999999999999998876
Q ss_pred CCCCCCccccccccCccc
Q 039720 594 KGVFSNETRISLTGNEQF 611 (973)
Q Consensus 594 ~~~~~~~~~l~~~~N~~~ 611 (973)
... ++++.+++.+|...
T Consensus 523 ~~~-~~L~~L~Ls~N~l~ 539 (844)
T 3j0a_A 523 DLP-ANLEILDISRNQLL 539 (844)
T ss_dssp CCC-SCCCEEEEEEECCC
T ss_pred hhh-ccccEEECCCCcCC
Confidence 544 78999999999653
No 14
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-50 Score=486.24 Aligned_cols=506 Identities=17% Similarity=0.174 Sum_probs=362.7
Q ss_pred EeeccCccccccCCCcCCCCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccc
Q 039720 68 DLESQNIGGFLSPYIGNLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLV 147 (973)
Q Consensus 68 ~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~ 147 (973)
+.++.+++ .+|..+. +++++|+|++|++++..+..|+++++|++|+|++|.+++..|..|+++++|++|++++|++.
T Consensus 13 ~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~ 89 (570)
T 2z63_A 13 QCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 89 (570)
T ss_dssp ECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred EeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCC
Confidence 33334443 3555442 46888888888888777778888888888888888888766778888888888888888888
Q ss_pred cchhhhhccccccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCC-CCCCcccCCCccceeccCCCCccccCCccc
Q 039720 148 GEIQAIIGNWLKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDG-RIPDSLGQLRNLNYLGTSENDFSGMFPLSV 226 (973)
Q Consensus 148 ~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~ 226 (973)
+..|..|..+++|++|++++|++++..+..|+++++|++|++++|++++ .+|..|+++++|++|++++|++++..|..+
T Consensus 90 ~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~ 169 (570)
T 2z63_A 90 SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDL 169 (570)
T ss_dssp EECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGG
T ss_pred ccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHc
Confidence 8888888888888999998888886555578888889999998888876 468888888889999999888888878888
Q ss_pred cCCCCC----cEEEccCCccccCCCcccccCCCCCcEEEccCCccc-ccCCccccCCCCCCEEEccCCcc------cccC
Q 039720 227 CNISSL----DEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLT-GFLPQSLSNASKLEWLELNENHF------SGQV 295 (973)
Q Consensus 227 ~~l~~L----~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l------~~~~ 295 (973)
..+++| +.+++++|.+++..| ..+ ...+|+.|++++|... ..++..+.+++.++.+.+..+.+ ....
T Consensus 170 ~~l~~L~~~~~~L~l~~n~l~~~~~-~~~-~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~ 247 (570)
T 2z63_A 170 RVLHQMPLLNLSLDLSLNPMNFIQP-GAF-KEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFD 247 (570)
T ss_dssp HHHHTCTTCCCEEECTTCCCCEECT-TTT-TTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECC
T ss_pred cchhccchhhhhcccCCCCceecCH-HHh-ccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcc
Confidence 888888 788888888884444 444 2347888888887543 23455666777776666543322 2223
Q ss_pred cccccCccc--ccceecccc-cCCCCCCCChhhhhhhcccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCcccc
Q 039720 296 RINFNSLPN--LSKLYLGRN-NLGTRTSTDLDFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISG 372 (973)
Q Consensus 296 ~~~~~~l~~--L~~L~L~~N-~l~~~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~ 372 (973)
...|.++++ ++.+++++| .+.... ...+..+++|+.|++++|.+. .+|..+... .++.|++++|.+.
T Consensus 248 ~~~~~~l~~l~l~~l~l~~~~~~~~~~------~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~--~L~~L~l~~n~~~- 317 (570)
T 2z63_A 248 KSALEGLCNLTIEEFRLAYLDYYLDDI------IDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF--GWQHLELVNCKFG- 317 (570)
T ss_dssp TTTTGGGGGSEEEEEEEEETTEEESCS------TTTTGGGTTCSEEEEESCEEC-SCCBCCSCC--CCSEEEEESCBCS-
T ss_pred hhhhccccccchhhhhhhcchhhhhhc------hhhhcCcCcccEEEecCccch-hhhhhhccC--CccEEeeccCccc-
Confidence 334444443 344555554 332221 123456677777777777666 355555444 5666666666666
Q ss_pred CCCccccCCCCcCEEEcccccCCCCCCccccCCCCCCeEEccCcccCCCC--CCccCCcCccceEEcCCCcccccccccc
Q 039720 373 TIPPEIRNLFNLNGLGLEYNQLTGTIPPAIGELRNLQYLGLVGNNIRGII--PDPIGNLTLLNVLQLGFNKLQGSIPSYL 450 (973)
Q Consensus 373 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 450 (973)
.+|. ..+++|+.|++++|.+.+..+. ..+++|++|++++|++++.. |..+..+++|++|++++|++++..+ .+
T Consensus 318 ~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~ 392 (570)
T 2z63_A 318 QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS-NF 392 (570)
T ss_dssp SCCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEE-EE
T ss_pred ccCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccc-cc
Confidence 4444 4667788888888877765554 66778888888888777543 5667777888888888888774443 37
Q ss_pred ccccccccccccCcccccCCCcc-ccccccccceeeccCCcccccCCcccccccccceeccccCccc-ccccccccCccc
Q 039720 451 GKCQNLMQLSAPNNKLNGTLPPQ-IFGITTLSKLLDLSENHLSGSIPLEVGNLKSLVQLDISRNNFS-NEIPVTLSACTT 528 (973)
Q Consensus 451 ~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~-~~~p~~~~~l~~ 528 (973)
..+++|+.|++++|.+.+..|.. +..+..+ +.|++++|.+++..|..+..+++|+.|++++|+++ +.+|..+..+++
T Consensus 393 ~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~ 471 (570)
T 2z63_A 393 LGLEQLEHLDFQHSNLKQMSEFSVFLSLRNL-IYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRN 471 (570)
T ss_dssp ETCTTCCEEECTTSEEESCTTSCTTTTCTTC-CEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTT
T ss_pred cccCCCCEEEccCCccccccchhhhhcCCCC-CEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccC
Confidence 77888888888888877655533 3334444 47888888887777777777888888888888876 467777788888
Q ss_pred hhhhcccCcccccccccchhhhccCCeecCCCCccccccCCCCCCCCccceEeccCCcCcCcCCCC
Q 039720 529 LEYLLMQGNSFNGSIPQSLNALKSIKELDLSCNNLSGQIPIHLGNLPFLEYLNLSYNHFEGKVPKK 594 (973)
Q Consensus 529 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 594 (973)
|++|++++|++++..|..+..+++|++|+|++|++++..|..+..+++|+.|++++|++++.+|..
T Consensus 472 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 472 LTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred CCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcch
Confidence 888888888888777777777888888888888887766677777888888888888888777754
No 15
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.4e-50 Score=482.86 Aligned_cols=510 Identities=20% Similarity=0.207 Sum_probs=435.0
Q ss_pred CCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccceeeccC
Q 039720 88 LRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLYG 167 (973)
Q Consensus 88 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~ 167 (973)
.+.++.++.+++ .+|..+. +++++|+|++|.+++..|..|.++++|++|++++|++.+..+..|.++++|++|+|++
T Consensus 9 ~~~~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 85 (570)
T 2z63_A 9 NITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTG 85 (570)
T ss_dssp TTEEECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred CcEEEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcC
Confidence 456888888888 7887664 5799999999999987788999999999999999999988889999999999999999
Q ss_pred CcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCcccc-CCccccCCCCCcEEEccCCccccCC
Q 039720 168 NQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGM-FPLSVCNISSLDEAYLFKNRFKGSL 246 (973)
Q Consensus 168 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~i 246 (973)
|++++..|..|+++++|++|++++|++++..+..|+++++|++|++++|.+++. +|..|+++++|++|++++|++++..
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~ 165 (570)
T 2z63_A 86 NPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIY 165 (570)
T ss_dssp CCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEEC
T ss_pred CcCCccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceec
Confidence 999988889999999999999999999966666899999999999999999873 6899999999999999999998554
Q ss_pred CcccccCCCCC----cEEEccCCcccccCCccccCCCCCCEEEccCCcccc-cCcccccCcccccceecccccCC-----
Q 039720 247 PVCLGFNLPKL----TVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSG-QVRINFNSLPNLSKLYLGRNNLG----- 316 (973)
Q Consensus 247 p~~~~~~l~~L----~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~----- 316 (973)
|..+. .+++| +.|++++|.+++..|..|..+ +|++|++++|.... ..+..+..+++++.+.+..+.+.
T Consensus 166 ~~~~~-~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l 243 (570)
T 2z63_A 166 CTDLR-VLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNL 243 (570)
T ss_dssp GGGGH-HHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSC
T ss_pred HHHcc-chhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhh
Confidence 54444 67777 899999999998888888776 79999999985442 33455677777777666544332
Q ss_pred -CCCCCChhhhhhhcccccceeeccccc-cccCCCChhhhhhhhhhhHhhhcCCccccCCCccccCCCCcCEEEcccccC
Q 039720 317 -TRTSTDLDFITLLTNCSKLVKLGLVFN-RFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEIRNLFNLNGLGLEYNQL 394 (973)
Q Consensus 317 -~~~~~~~~~~~~l~~l~~L~~L~l~~N-~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l 394 (973)
.+....+ ..+.++ .++.++++.+ .+.+.+|..+..+ ..++.|++++|.+. .+|..+..+ +|+.|++++|++
T Consensus 244 ~~~~~~~~---~~l~~l-~l~~l~l~~~~~~~~~~~~~~~~l-~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~ 316 (570)
T 2z63_A 244 EKFDKSAL---EGLCNL-TIEEFRLAYLDYYLDDIIDLFNCL-TNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKF 316 (570)
T ss_dssp EECCTTTT---GGGGGS-EEEEEEEEETTEEESCSTTTTGGG-TTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBC
T ss_pred hhcchhhh---cccccc-chhhhhhhcchhhhhhchhhhcCc-CcccEEEecCccch-hhhhhhccC-CccEEeeccCcc
Confidence 2222222 222222 3677888888 7788888887765 67999999999998 688889999 999999999999
Q ss_pred CCCCCccccCCCCCCeEEccCcccCCCCCCccCCcCccceEEcCCCcccccc--ccccccccccccccccCcccccCCCc
Q 039720 395 TGTIPPAIGELRNLQYLGLVGNNIRGIIPDPIGNLTLLNVLQLGFNKLQGSI--PSYLGKCQNLMQLSAPNNKLNGTLPP 472 (973)
Q Consensus 395 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~l~~N~l~~~~p~ 472 (973)
+ .+|. ..+++|+.|++++|.+.+..+. ..+++|++|++++|++++.. |..+..+++|+.|++++|.+. .+|.
T Consensus 317 ~-~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~-~~~~ 390 (570)
T 2z63_A 317 G-QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSS 390 (570)
T ss_dssp S-SCCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEE-EEEE
T ss_pred c-ccCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccc-cccc
Confidence 9 5665 5789999999999999877665 78999999999999999654 788999999999999999999 4565
Q ss_pred cccccccccceeeccCCcccccCC-cccccccccceeccccCcccccccccccCccchhhhcccCcccc-cccccchhhh
Q 039720 473 QIFGITTLSKLLDLSENHLSGSIP-LEVGNLKSLVQLDISRNNFSNEIPVTLSACTTLEYLLMQGNSFN-GSIPQSLNAL 550 (973)
Q Consensus 473 ~~~~~~~l~~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l 550 (973)
.+..+..+ +.|++++|.+++..| ..+..+++|+.|++++|.+++..|..|.++++|+.|++++|+++ +.+|..+..+
T Consensus 391 ~~~~l~~L-~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l 469 (570)
T 2z63_A 391 NFLGLEQL-EHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTEL 469 (570)
T ss_dssp EEETCTTC-CEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTC
T ss_pred cccccCCC-CEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcc
Confidence 56666666 499999999998766 57899999999999999999999999999999999999999998 6799999999
Q ss_pred ccCCeecCCCCccccccCCCCCCCCccceEeccCCcCcCcCCCC-CCCCCccccccccCccccCCCC
Q 039720 551 KSIKELDLSCNNLSGQIPIHLGNLPFLEYLNLSYNHFEGKVPKK-GVFSNETRISLTGNEQFCGGLG 616 (973)
Q Consensus 551 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~l~~~~N~~~cg~~~ 616 (973)
++|++|+|++|++++..|..+..+++|++|++++|++++.+|.. ..+++++.+++.+||+.|+++.
T Consensus 470 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 470 RNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred cCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 99999999999999888999999999999999999999988864 5688999999999999998764
No 16
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=2.2e-50 Score=442.61 Aligned_cols=263 Identities=25% Similarity=0.408 Sum_probs=206.8
Q ss_pred hcCCcCCccccccceeEEEEEEC-----CCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCC
Q 039720 674 KEFSSSNRIGKGSFGFVYKGNLG-----EDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGA 748 (973)
Q Consensus 674 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 748 (973)
++|.+.++||+|+||+||+|+++ .+++.||||+++.......++|.+|+++|++++|||||+++++|.+ .
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-----~ 115 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTE-----G 115 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-----S
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-----C
Confidence 46788899999999999999875 3688999999987666667889999999999999999999999764 3
Q ss_pred ceEEEEEeeccCCCHHHHhhhcC---------------CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEec
Q 039720 749 DFKAIVYEYMQYGSVDDWLHHTN---------------DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLD 813 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~~---------------~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~ 813 (973)
...++|||||++|+|.++++... .+++.++..|+.|||+||+|||++ +||||||||+|||++
T Consensus 116 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~ 192 (329)
T 4aoj_A 116 RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVG 192 (329)
T ss_dssp SSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEE
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEEC
Confidence 77999999999999999997642 356678899999999999999999 999999999999999
Q ss_pred CCCcEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCC
Q 039720 814 HDMVAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFN 892 (973)
Q Consensus 814 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~ 892 (973)
.++.+||+|||+|+...... .........||+.|||||++.+..|+.++|||||||++|||+| |+.||.....
T Consensus 193 ~~~~~Ki~DFGla~~~~~~~------~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~ 266 (329)
T 4aoj_A 193 QGLVVKIGDFGMSRDIYSTD------YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN 266 (329)
T ss_dssp TTTEEEECCCC----------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH
T ss_pred CCCcEEEcccccceeccCCC------cceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH
Confidence 99999999999998764322 1222334579999999999999999999999999999999999 9999986532
Q ss_pred CCccHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccccccCCCCC
Q 039720 893 DGLTLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEIFIGPPII 972 (973)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~ 972 (973)
. .+...... ......+..++..+.+++.+||+.||++||||+||++.|+++. ..||+|
T Consensus 267 ~--~~~~~i~~-----------------g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~---~~pp~~ 324 (329)
T 4aoj_A 267 T--EAIDCITQ-----------------GRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALA---QAPPVY 324 (329)
T ss_dssp H--HHHHHHHH-----------------TCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHH---HSCC--
T ss_pred H--HHHHHHHc-----------------CCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHh---hCCccc
Confidence 2 11111110 0012223345667889999999999999999999999999874 458875
No 17
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.1e-50 Score=438.67 Aligned_cols=258 Identities=24% Similarity=0.412 Sum_probs=210.7
Q ss_pred hcCCcCCccccccceeEEEEEEC-----CCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCC
Q 039720 674 KEFSSSNRIGKGSFGFVYKGNLG-----EDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGA 748 (973)
Q Consensus 674 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 748 (973)
++|.+.++||+|+||+||+|++. .++..||||+++.......++|.+|+++|++++|||||+++++|.+ +
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-----~ 87 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVE-----G 87 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-----S
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEee-----C
Confidence 57888999999999999999874 3688999999987666667889999999999999999999999764 4
Q ss_pred ceEEEEEeeccCCCHHHHhhhcC-------------CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCC
Q 039720 749 DFKAIVYEYMQYGSVDDWLHHTN-------------DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHD 815 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~~-------------~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~ 815 (973)
+..++|||||++|+|.++++..+ .+++.++..++.|||+||+|||++ +||||||||+|||++.+
T Consensus 88 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~ 164 (299)
T 4asz_A 88 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGEN 164 (299)
T ss_dssp SSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGG
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCC
Confidence 78999999999999999997642 466788999999999999999999 99999999999999999
Q ss_pred CcEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCC
Q 039720 816 MVAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFNDG 894 (973)
Q Consensus 816 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~~~ 894 (973)
+.+||+|||+|+...... .........||+.|||||++.+..|+.++|||||||++|||+| |+.||......
T Consensus 165 ~~~Ki~DFGla~~~~~~~------~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~- 237 (299)
T 4asz_A 165 LLVKIGDFGMSRDVYSTD------YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN- 237 (299)
T ss_dssp GCEEECCCSCHHHHTGGG------CEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-
T ss_pred CcEEECCcccceecCCCC------ceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-
Confidence 999999999998764321 1122233568999999999999999999999999999999999 99999865322
Q ss_pred ccHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccc
Q 039720 895 LTLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGE 964 (973)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 964 (973)
.+...... ...+..+..++..+.+++.+||+.||++|||++||.+.|+++.+
T Consensus 238 -~~~~~i~~-----------------~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 238 -EVIECITQ-----------------GRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp -HHHHHHHH-----------------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -HHHHHHHc-----------------CCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 11111110 00112233456678899999999999999999999999998754
No 18
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.1e-49 Score=435.57 Aligned_cols=251 Identities=22% Similarity=0.319 Sum_probs=210.2
Q ss_pred hcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceEEE
Q 039720 674 KEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFKAI 753 (973)
Q Consensus 674 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 753 (973)
+.|++.++||+|+||+||+|+++.+|+.||||++........+.+.+|+++|+.++|||||++++++.. .+..|+
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~-----~~~~~i 148 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-----GDELWV 148 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEE-----TTEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-----CCEEEE
Confidence 569999999999999999999999999999999987666666778999999999999999999998655 478999
Q ss_pred EEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhccCCC
Q 039720 754 VYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLSHHP 833 (973)
Q Consensus 754 v~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~~~~ 833 (973)
|||||+||+|.+++.+ ..+++.+++.++.||+.||+|||++ +||||||||+|||++.+|++||+|||+|+.+...
T Consensus 149 vmEy~~gg~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~- 223 (346)
T 4fih_A 149 VMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE- 223 (346)
T ss_dssp EECCCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSS-
T ss_pred EEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCC-
Confidence 9999999999999876 4678899999999999999999999 9999999999999999999999999999876432
Q ss_pred CccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCccccccc
Q 039720 834 FLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKVMGIV 913 (973)
Q Consensus 834 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
.......+||+.|||||++.+..|+.++||||+||++|||++|+.||...... ......... .
T Consensus 224 -------~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--~~~~~i~~~--------~ 286 (346)
T 4fih_A 224 -------VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAMKMIRDN--------L 286 (346)
T ss_dssp -------SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHS--------S
T ss_pred -------CCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--HHHHHHHcC--------C
Confidence 22334568999999999999999999999999999999999999999753221 111111110 0
Q ss_pred CcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 914 DPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
.+. ...+..+..++.+++.+||+.||++|||++|++++
T Consensus 287 ~~~-------~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 287 PPR-------LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp CCC-------CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCC-------CCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 001 11123344567789999999999999999999874
No 19
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.5e-49 Score=487.38 Aligned_cols=462 Identities=19% Similarity=0.247 Sum_probs=320.0
Q ss_pred CCCCEEEccCCCCCCCCCccccccCCCCEEee-ecccCCCCCCcccccCC-Ccc-----ce----------Eeccccccc
Q 039720 86 SFLRVINLANNSFHGQIPKEVGRLFRLETIVL-SNNSFSGKIPTNLSRCF-NLI-----DF----------WVHTNNLVG 148 (973)
Q Consensus 86 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L-s~n~l~~~~p~~~~~l~-~L~-----~L----------~l~~n~~~~ 148 (973)
.+++.|+|++|++.|.+|++|++|++|++|+| ++|.++|..|....... .+. .+ .....++.+
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 46899999999999999999999999999999 99999887554322110 000 00 001111111
Q ss_pred chhhhh-----------ccccccceeeccC--CcccccCCCCCCCCCcccEEEccCCcCCC-----------------CC
Q 039720 149 EIQAII-----------GNWLKIERLSLYG--NQLTGQLPPSIGNLSALQTFDIAGNKLDG-----------------RI 198 (973)
Q Consensus 149 ~~~~~~-----------~~l~~L~~L~L~~--n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-----------------~~ 198 (973)
.++..+ .....++.+.+.. |++++ +|.+|+++++|++|+|++|++++ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 221111 1222344444544 77877 78888888888888888888886 37
Q ss_pred CCccc--CCCccceeccCCCCccccCCccccCCCCCcEEEccCCc-ccc-CCCcccc------cCCCCCcEEEccCCccc
Q 039720 199 PDSLG--QLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNR-FKG-SLPVCLG------FNLPKLTVLVVAQNNLT 268 (973)
Q Consensus 199 p~~~~--~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~ip~~~~------~~l~~L~~L~Ls~N~l~ 268 (973)
|..++ ++++|++|+|++|.+.+.+|..|+++++|+.|+|++|+ ++| .+|..++ ..+++|++|+|++|.++
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 87777 88888888888888888888888888888888888887 777 6776554 23458999999999988
Q ss_pred ccCCc--cccCCCCCCEEEccCCcccccCcccccCcccccceecccccCCCCCCCChhhhhhhcccccceeecccccccc
Q 039720 269 GFLPQ--SLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNLGTRTSTDLDFITLLTNCSKLVKLGLVFNRFG 346 (973)
Q Consensus 269 ~~~p~--~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~N~l~ 346 (973)
.+|. .|.++++|++|+|++|+++ .+| .|..+++|+.|+|++|+++.
T Consensus 562 -~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~~----------------------------- 609 (876)
T 4ecn_A 562 -EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIEE----------------------------- 609 (876)
T ss_dssp -BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCSC-----------------------------
T ss_pred -ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCcccc-----------------------------
Confidence 7787 8889999999999999988 555 88888888888888887653
Q ss_pred CCCChhhhhhhhhhhHhhhcCCccccCCCccccCCCC-cCEEEcccccCCCCCCccccCCCC--CCeEEccCcccCCCCC
Q 039720 347 GALPHSIANLSTTMTLIAMAGNQISGTIPPEIRNLFN-LNGLGLEYNQLTGTIPPAIGELRN--LQYLGLVGNNIRGIIP 423 (973)
Q Consensus 347 ~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~L~~N~l~~~~p 423 (973)
+|..+..+++ |+.|+|++|+++ .+|..+..++. |+.|+|++|++.+.+|
T Consensus 610 ---------------------------lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip 661 (876)
T 4ecn_A 610 ---------------------------IPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGR 661 (876)
T ss_dssp ---------------------------CCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSS
T ss_pred ---------------------------chHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccc
Confidence 3334445555 666666666666 45555555433 6666666666665444
Q ss_pred Ccc---C--CcCccceEEcCCCcccccccccc-ccccccccccccCcccccCCCcccccccc-------ccceeeccCCc
Q 039720 424 DPI---G--NLTLLNVLQLGFNKLQGSIPSYL-GKCQNLMQLSAPNNKLNGTLPPQIFGITT-------LSKLLDLSENH 490 (973)
Q Consensus 424 ~~~---~--~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~~p~~~~~~~~-------l~~~L~Ls~N~ 490 (973)
... . .+++|++|+|++|+++ .+|..+ ..+++|+.|++++|++. .+|..++.... .++.|+|++|+
T Consensus 662 ~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~ 739 (876)
T 4ecn_A 662 NISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNK 739 (876)
T ss_dssp SCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSC
T ss_pred cchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCC
Confidence 322 1 2335666666666666 344433 35666666666666666 66665554331 23467777777
Q ss_pred ccccCCcccc--cccccceeccccCcccccccccccCccchhhhcccC------cccccccccchhhhccCCeecCCCCc
Q 039720 491 LSGSIPLEVG--NLKSLVQLDISRNNFSNEIPVTLSACTTLEYLLMQG------NSFNGSIPQSLNALKSIKELDLSCNN 562 (973)
Q Consensus 491 l~~~~p~~~~--~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~------N~l~~~~p~~~~~l~~L~~L~Ls~N~ 562 (973)
++ .+|..+. .+++|+.|+|++|++++ +|..+.++++|+.|+|++ |++.+.+|..+..+++|+.|+|++|+
T Consensus 740 L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~ 817 (876)
T 4ecn_A 740 LT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSND 817 (876)
T ss_dssp CC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSC
T ss_pred Cc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCC
Confidence 77 5666665 67777777777777775 677777777777777755 88888999999999999999999999
Q ss_pred cccccCCCCCCCCccceEeccCCcCcCcCCCCC-CCCCccccccccCcccc--CCC
Q 039720 563 LSGQIPIHLGNLPFLEYLNLSYNHFEGKVPKKG-VFSNETRISLTGNEQFC--GGL 615 (973)
Q Consensus 563 l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~-~~~~~~~l~~~~N~~~c--g~~ 615 (973)
| +.+|..+. ++|+.|+|++|++....+... .........+.+|++.| ||+
T Consensus 818 L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~~I~gC~ 870 (876)
T 4ecn_A 818 I-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQDIRGCD 870 (876)
T ss_dssp C-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTSEEESCG
T ss_pred C-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchheeecCCCccccCCCC
Confidence 9 68998876 699999999999987665431 11223445666666543 654
No 20
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.4e-48 Score=475.02 Aligned_cols=561 Identities=17% Similarity=0.144 Sum_probs=438.3
Q ss_pred CCcCCCCCCCCCCCCCceeeeEeeCCCCeEEEEEeeccCccccccCCCcCCCCCCEEEccCCCCCCCCCccccccCCCCE
Q 039720 35 DPLGVTKSWNNSINLCQWTGVTCGHRHQRVTKLDLESQNIGGFLSPYIGNLSFLRVINLANNSFHGQIPKEVGRLFRLET 114 (973)
Q Consensus 35 d~~~~l~sw~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 114 (973)
|+...+++|..+. +..|....|...... .|-++.+++ .+|+.+- +++++|||++|+|++..|.+|.++++|++
T Consensus 8 ~~~~~~~~~~~~~-p~~~~~c~~~~~~~~---~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~ 80 (635)
T 4g8a_A 8 DDDDKLAAANSSI-PESWEPCVEVVPNIT---YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQV 80 (635)
T ss_dssp ------------------CCSEEEETTTE---EECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred CCcchhhcccCCC-CCCCCCccccCCCCE---EECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCE
Confidence 3344577887543 456766666543322 355666665 5776542 47999999999999766778999999999
Q ss_pred EeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccceeeccCCcccccCCCCCCCCCcccEEEccCCcC
Q 039720 115 IVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKL 194 (973)
Q Consensus 115 L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l 194 (973)
|||++|+|++..|..|.++++|++|++++|++.+..+..|.++++|++|+|++|++++..+..|+++++|++|+|++|++
T Consensus 81 L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l 160 (635)
T 4g8a_A 81 LDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLI 160 (635)
T ss_dssp EECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCcc
Confidence 99999999977777899999999999999999988889999999999999999999987777899999999999999999
Q ss_pred CC-CCCCcccCCCccceeccCCCCccccCCccccCCCCCc----EEEccCCccccCCCcccccCCCCCcEEEccCCcccc
Q 039720 195 DG-RIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLD----EAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTG 269 (973)
Q Consensus 195 ~~-~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~ 269 (973)
++ .+|..++.+++|++|+|++|+|++..+..+..+.+++ .++++.|.+. .++...+ ....++.+++++|....
T Consensus 161 ~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~-~i~~~~~-~~~~~~~l~l~~n~~~~ 238 (635)
T 4g8a_A 161 QSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN-FIQPGAF-KEIRLHKLTLRNNFDSL 238 (635)
T ss_dssp CCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCC-EECTTTT-TTCEEEEEEEESCCSSH
T ss_pred ccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCccc-ccCcccc-cchhhhhhhhhcccccc
Confidence 75 4688899999999999999999999888887766544 6889999998 5666555 45678889999987653
Q ss_pred -cCCccccCCCCCCEEEccCCc------ccccCcccccCcccccceecccccCCCCCCCChhhhhhhcccccceeecccc
Q 039720 270 -FLPQSLSNASKLEWLELNENH------FSGQVRINFNSLPNLSKLYLGRNNLGTRTSTDLDFITLLTNCSKLVKLGLVF 342 (973)
Q Consensus 270 -~~p~~~~~l~~L~~L~Ls~N~------l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~ 342 (973)
..+..+.++..++...+..+. +.......+..+..+..+.+..+......... ...+..+.+++.+.+..
T Consensus 239 ~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~---~~~~~~~~~l~~l~~~~ 315 (635)
T 4g8a_A 239 NVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGI---IDLFNCLTNVSSFSLVS 315 (635)
T ss_dssp HHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEEC---TTTTGGGTTCSEEEEES
T ss_pred cccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccch---hhhhhhhcccccccccc
Confidence 345567888888887775443 33344455666777777776666543322211 12344556777777777
Q ss_pred ccccCCCChhhhhhhhhhhHhhhcCCccccCCCccccCCCCcCEEEcccccCCCCCCccccCCCCCCeEEccCcccCC--
Q 039720 343 NRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEIRNLFNLNGLGLEYNQLTGTIPPAIGELRNLQYLGLVGNNIRG-- 420 (973)
Q Consensus 343 N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-- 420 (973)
+.+....+.. ....++.|++.+|.+.+..+ ..+..|+.++++.|.+... .....+++|+.|++++|.+..
T Consensus 316 ~~~~~~~~~~---~~~~L~~L~l~~~~~~~~~~---~~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~ 387 (635)
T 4g8a_A 316 VTIERVKDFS---YNFGWQHLELVNCKFGQFPT---LKLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKG 387 (635)
T ss_dssp CEEEECGGGG---SCCCCSEEEEESCEESSCCC---CBCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEE
T ss_pred cccccccccc---cchhhhhhhcccccccCcCc---ccchhhhhcccccccCCCC--cccccccccccchhhcccccccc
Confidence 7665433221 12457788899998875544 3467788999999988743 345678999999999999863
Q ss_pred CCCCccCCcCccceEEcCCCccccccccccccccccccccccCcccccCCCccccccccccceeeccCCcccccCCcccc
Q 039720 421 IIPDPIGNLTLLNVLQLGFNKLQGSIPSYLGKCQNLMQLSAPNNKLNGTLPPQIFGITTLSKLLDLSENHLSGSIPLEVG 500 (973)
Q Consensus 421 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~ 500 (973)
..+..+..+.+|++|+++.|.+. ..+..+..+++|+.+++++|......+...+.....++.++++.|.+++..|..+.
T Consensus 388 ~~~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~ 466 (635)
T 4g8a_A 388 CCSQSDFGTISLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFN 466 (635)
T ss_dssp ECCHHHHSCSCCCEEECCSCSEE-EECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTT
T ss_pred ccccchhhhhhhhhhhccccccc-cccccccccccccchhhhhccccccccccccccccccccccccccccccccccccc
Confidence 34556778899999999999998 56677889999999999999988777766665555556999999999999999999
Q ss_pred cccccceeccccCcc-cccccccccCccchhhhcccCcccccccccchhhhccCCeecCCCCccccccCCCCCCCCccce
Q 039720 501 NLKSLVQLDISRNNF-SNEIPVTLSACTTLEYLLMQGNSFNGSIPQSLNALKSIKELDLSCNNLSGQIPIHLGNLPFLEY 579 (973)
Q Consensus 501 ~l~~L~~L~ls~N~l-~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 579 (973)
.+++|+.|++++|++ .+..|..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++
T Consensus 467 ~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~ 546 (635)
T 4g8a_A 467 GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQV 546 (635)
T ss_dssp TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCE
T ss_pred cchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCE
Confidence 999999999999985 4567889999999999999999999999999999999999999999999888889999999999
Q ss_pred EeccCCcCcCcCCCC-CCC-CCccccccccCccccCCCC
Q 039720 580 LNLSYNHFEGKVPKK-GVF-SNETRISLTGNEQFCGGLG 616 (973)
Q Consensus 580 L~ls~N~l~~~~p~~-~~~-~~~~~l~~~~N~~~cg~~~ 616 (973)
|+|++|+|++.+|.. ..+ ++++.+++.+|||.|+|-.
T Consensus 547 L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~ 585 (635)
T 4g8a_A 547 LDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEH 585 (635)
T ss_dssp EECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGG
T ss_pred EECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCc
Confidence 999999999999875 234 6799999999999999864
No 21
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=7.6e-50 Score=437.65 Aligned_cols=250 Identities=21% Similarity=0.318 Sum_probs=200.3
Q ss_pred hcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceE
Q 039720 674 KEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK--KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFK 751 (973)
Q Consensus 674 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 751 (973)
++|++.+.||+|+||+||+|+++.+|+.||||+++... ....+.+.+|++++++++|||||++++++.+ .+..
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~-----~~~~ 98 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEE-----NGSL 98 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----TTEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEE-----CCEE
Confidence 58999999999999999999999999999999997553 3345779999999999999999999998654 4789
Q ss_pred EEEEeeccCCCHHHHhhhcC--CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhc
Q 039720 752 AIVYEYMQYGSVDDWLHHTN--DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 829 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~ 829 (973)
|+|||||+||+|.+++...+ .+++.+++.|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+..
T Consensus 99 yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 175 (350)
T 4b9d_A 99 YIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVL 175 (350)
T ss_dssp EEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCC
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceee
Confidence 99999999999999997543 346778899999999999999999 9999999999999999999999999999865
Q ss_pred cCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCccc
Q 039720 830 SHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKV 909 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
... .......+||+.|||||++.+..|+.++||||+||++|||+||+.||...... .+ .......
T Consensus 176 ~~~--------~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~--~~--~~~i~~~--- 240 (350)
T 4b9d_A 176 NST--------VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK--NL--VLKIISG--- 240 (350)
T ss_dssp CHH--------HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH--HH--HHHHHHT---
T ss_pred cCC--------cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--HH--HHHHHcC---
Confidence 321 12234567999999999999999999999999999999999999999754221 11 1111000
Q ss_pred ccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 910 MGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
.. +..+..++.++.+++.+||+.||++|||++|+++.
T Consensus 241 ------~~------~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 241 ------SF------PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp ------CC------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ------CC------CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00 11112334567789999999999999999999864
No 22
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-49 Score=428.98 Aligned_cols=262 Identities=27% Similarity=0.427 Sum_probs=204.8
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCce
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK--KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADF 750 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 750 (973)
.+++.+.++||+|+||+||+|++. ..||||+++... ....+.|.+|++++++++|||||+++++|.. +.
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~------~~ 105 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK------DN 105 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS------SS
T ss_pred HHHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC------Ce
Confidence 357888999999999999999874 369999997543 3345789999999999999999999998743 45
Q ss_pred EEEEEeeccCCCHHHHhhhc-CCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhc
Q 039720 751 KAIVYEYMQYGSVDDWLHHT-NDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 829 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~ 829 (973)
.++|||||++|+|.++++.. ..+++.++..|+.|||.||+|||++ +||||||||+|||+++++++||+|||+|+..
T Consensus 106 ~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 182 (307)
T 3omv_A 106 LAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVK 182 (307)
T ss_dssp CEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC-
T ss_pred EEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceec
Confidence 79999999999999999754 4577888999999999999999999 9999999999999999999999999999865
Q ss_pred cCCCCccCCCCCcccccccccccccCcccccC---CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcC
Q 039720 830 SHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMG---GDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALP 906 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 906 (973)
.... .........||+.|||||++.+ .+|+.++|||||||++|||+||+.||......... .......
T Consensus 183 ~~~~------~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~-~~~~~~~-- 253 (307)
T 3omv_A 183 SRWS------GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI-IFMVGRG-- 253 (307)
T ss_dssp -----------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH-HHHHHTT--
T ss_pred ccCC------cceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHH-HHHHhcC--
Confidence 4321 1223345679999999999864 46899999999999999999999999764332111 1111100
Q ss_pred cccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccccc
Q 039720 907 KKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEIF 966 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 966 (973)
...+.. +..+.+++..+.+++.+||+.||++||||+||++.|+.+...+
T Consensus 254 -----~~~p~~------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 254 -----YASPDL------SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp -----CCCCCS------TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred -----CCCCCc------ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 011111 1222345667889999999999999999999999999886543
No 23
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.5e-49 Score=433.52 Aligned_cols=258 Identities=23% Similarity=0.272 Sum_probs=208.0
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceEE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFKA 752 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 752 (973)
.+.|++.++||+|+||+||+|+++.+|+.||||+++.+.. ..+|+.+++.++|||||++++++.+ ++..|
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~-----~~~~~ 126 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVRE-----GPWVN 126 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEE-----TTEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEE-----CCEEE
Confidence 3568888999999999999999999999999999975433 2469999999999999999998654 47899
Q ss_pred EEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCC-cEEEeccccchhccC
Q 039720 753 IVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDM-VAHVSDFGLARFLSH 831 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~-~~kl~Dfg~a~~~~~ 831 (973)
+|||||+||+|.++++..+.+++..+..++.||+.||+|||++ +||||||||+|||++.+| ++||+|||+|+....
T Consensus 127 ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~ 203 (336)
T 4g3f_A 127 IFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQP 203 (336)
T ss_dssp EEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC--
T ss_pred EEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccC
Confidence 9999999999999999888899999999999999999999999 999999999999999988 699999999987654
Q ss_pred CCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCccccc
Q 039720 832 HPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKVMG 911 (973)
Q Consensus 832 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
.... .........+||+.|||||++.+..|+.++||||+||++|||+||+.||......... ........
T Consensus 204 ~~~~---~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~-~~i~~~~~------ 273 (336)
T 4g3f_A 204 DGLG---KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLC-LKIASEPP------ 273 (336)
T ss_dssp -------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCH-HHHHHSCC------
T ss_pred CCcc---cceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHH-HHHHcCCC------
Confidence 2200 0011222357999999999999999999999999999999999999999865443221 11111000
Q ss_pred ccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhcc
Q 039720 912 IVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVG 963 (973)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 963 (973)
.. ...+..++..+.+++.+||+.||++|||++|+++.+....
T Consensus 274 ----~~------~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l 315 (336)
T 4g3f_A 274 ----PI------REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKAL 315 (336)
T ss_dssp ----GG------GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----Cc------hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHH
Confidence 00 0112234556778899999999999999999999887653
No 24
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2.4e-49 Score=473.06 Aligned_cols=491 Identities=18% Similarity=0.202 Sum_probs=360.5
Q ss_pred CCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccceeecc
Q 039720 87 FLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLY 166 (973)
Q Consensus 87 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~ 166 (973)
.....|+++|+++ .+|..+. ++|++|+|++|.+++..|..|+++++|++|++++|++.+..|..|.++++|++|+|+
T Consensus 6 ~~~~c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls 82 (549)
T 2z81_A 6 ASGVCDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLS 82 (549)
T ss_dssp TTSEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECT
T ss_pred CCceEECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECC
Confidence 3445688889998 7887764 789999999999987778888888888777777777777777777777777777777
Q ss_pred CCcccccCCCCCCCCCcccEEEccCCcCCC-CCCCcccCCCccceeccCCCCc-cccCCccccCCCCCcEEEccCCcccc
Q 039720 167 GNQLTGQLPPSIGNLSALQTFDIAGNKLDG-RIPDSLGQLRNLNYLGTSENDF-SGMFPLSVCNISSLDEAYLFKNRFKG 244 (973)
Q Consensus 167 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~L~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~L~~N~l~~ 244 (973)
+|.+++..|..|+++++|++|++++|++++ ..|..|+++++|++|++++|.+ ....+..|.++++|++|++++|++++
T Consensus 83 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 162 (549)
T 2z81_A 83 DNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRN 162 (549)
T ss_dssp TSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCE
T ss_pred CCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccc
Confidence 777776555557777777777777777765 2456677777777777777763 33333567777777777777777776
Q ss_pred CCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccC---cccccCcccccceecccccCCCCCCC
Q 039720 245 SLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQV---RINFNSLPNLSKLYLGRNNLGTRTST 321 (973)
Q Consensus 245 ~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~---~~~~~~l~~L~~L~L~~N~l~~~~~~ 321 (973)
.+|..+. .+++|++|+++.|.+....+..+..+++|++|+|++|++++.. ......+++|+.|++++|.++.....
T Consensus 163 ~~~~~l~-~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 241 (549)
T 2z81_A 163 YQSQSLK-SIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFN 241 (549)
T ss_dssp ECTTTTT-TCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHH
T ss_pred cChhhhh-ccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHH
Confidence 6666555 5677777777777766333323355677777777777776542 12234456677777777665431111
Q ss_pred ChhhhhhhcccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCccccCCCccccCCCCcCEEEcccccCCCC----
Q 039720 322 DLDFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEIRNLFNLNGLGLEYNQLTGT---- 397 (973)
Q Consensus 322 ~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---- 397 (973)
.....+..+++|+.+++++|.+.+...- .......+..+.+|+.|++.++.+...
T Consensus 242 --~l~~~~~~~~~L~~l~l~~~~~~~~~~~-------------------~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~ 300 (549)
T 2z81_A 242 --ELLKLLRYILELSEVEFDDCTLNGLGDF-------------------NPSESDVVSELGKVETVTIRRLHIPQFYLFY 300 (549)
T ss_dssp --HHHGGGGGCTTCCEEEEESCEEECCSCC-------------------CCCTTTCCCCCTTCCEEEEESCBCSCGGGSC
T ss_pred --HHHHHhhhhccccccccccccccccccc-------------------cccchhhhhhhcccccccccccccchhhhcc
Confidence 1222334455666666666555432110 001123456788999999999987632
Q ss_pred -CCccccCCCCCCeEEccCcccCCCCCCcc-CCcCccceEEcCCCccccccc---cccccccccccccccCcccccCCC-
Q 039720 398 -IPPAIGELRNLQYLGLVGNNIRGIIPDPI-GNLTLLNVLQLGFNKLQGSIP---SYLGKCQNLMQLSAPNNKLNGTLP- 471 (973)
Q Consensus 398 -~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~l~~N~l~~~~p- 471 (973)
++..+...++|+.|++++|.+. .+|..+ ..+++|++|++++|++++.+| ..++.+++|+.|++++|++++ +|
T Consensus 301 ~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~ 378 (549)
T 2z81_A 301 DLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRS-MQK 378 (549)
T ss_dssp CCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCC-HHH
T ss_pred cchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccc-ccc
Confidence 2333455689999999999998 667665 579999999999999998774 447889999999999999984 43
Q ss_pred --ccccccccccceeeccCCcccccCCcccccccccceeccccCcccccccccccCccchhhhcccCcccccccccchhh
Q 039720 472 --PQIFGITTLSKLLDLSENHLSGSIPLEVGNLKSLVQLDISRNNFSNEIPVTLSACTTLEYLLMQGNSFNGSIPQSLNA 549 (973)
Q Consensus 472 --~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 549 (973)
..+..+..+ +.|++++|+++ .+|..+..+++|+.|++++|+++ .+|..+. ++|++|+|++|+|++.+ ..
T Consensus 379 ~~~~~~~l~~L-~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~--~~L~~L~Ls~N~l~~~~----~~ 449 (549)
T 2z81_A 379 TGEILLTLKNL-TSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIP--QTLEVLDVSNNNLDSFS----LF 449 (549)
T ss_dssp HHHHGGGCTTC-CEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSC--TTCSEEECCSSCCSCCC----CC
T ss_pred chhhhhcCCCC-CEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchhc--CCceEEECCCCChhhhc----cc
Confidence 234455555 59999999999 68999999999999999999998 4555443 68999999999999643 47
Q ss_pred hccCCeecCCCCccccccCCCCCCCCccceEeccCCcCcCcCCC-CCCCCCccccccccCccccCCC
Q 039720 550 LKSIKELDLSCNNLSGQIPIHLGNLPFLEYLNLSYNHFEGKVPK-KGVFSNETRISLTGNEQFCGGL 615 (973)
Q Consensus 550 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~~~~~~l~~~~N~~~cg~~ 615 (973)
+++|++|+|++|+|+ .+|. ...+++|++|+|++|++++.+|. ...+++++.+++.+|||.|+++
T Consensus 450 l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 450 LPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp CTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred CChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 899999999999999 7886 46799999999999999999887 3678899999999999999886
No 25
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=5.5e-50 Score=484.31 Aligned_cols=473 Identities=19% Similarity=0.259 Sum_probs=321.6
Q ss_pred CCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCC------C------CCCcccccCCCccceEecccccccchhhh
Q 039720 86 SFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFS------G------KIPTNLSRCFNLIDFWVHTNNLVGEIQAI 153 (973)
Q Consensus 86 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~------~------~~p~~~~~l~~L~~L~l~~n~~~~~~~~~ 153 (973)
.+++.|+|++|+++|.+|++|++|++|++|+|++|.+. | .+|... +..|+ ++++.|.+.+.+|..
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~ 157 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPRED 157 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGG
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhh
Confidence 36889999999999999999999999999999999872 2 233322 22233 444444444444443
Q ss_pred hcc-ccccceeeccCCcccccCCCCCCCCCcccEEEc--cCCcCCCCCCCcccCCCccceeccCCCCcccc-CCccccCC
Q 039720 154 IGN-WLKIERLSLYGNQLTGQLPPSIGNLSALQTFDI--AGNKLDGRIPDSLGQLRNLNYLGTSENDFSGM-FPLSVCNI 229 (973)
Q Consensus 154 ~~~-l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L--~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~-~p~~~~~l 229 (973)
+.. +.++..+++....+.. .....++.+.+ .+|++++ +|.+|+++++|++|+|++|.+++. ++....
T Consensus 158 ~~~~~~~l~~~~l~~~~~~~------~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~-- 228 (636)
T 4eco_A 158 FSDLIKDCINSDPQQKSIKK------SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWE-- 228 (636)
T ss_dssp SCHHHHHHHHHCTTSCCCCC------CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCS--
T ss_pred HHHHHHHHhhcCcccccccc------ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCcccccccccccc--
Confidence 331 1222333333222210 01111222222 1345554 555555555555555555555543 000000
Q ss_pred CCCcEEEccCCccccCCCcccc-cCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCc-ccc-cCcccccCc----
Q 039720 230 SSLDEAYLFKNRFKGSLPVCLG-FNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENH-FSG-QVRINFNSL---- 302 (973)
Q Consensus 230 ~~L~~L~L~~N~l~~~ip~~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~~~~~~~l---- 302 (973)
+ -..+...+.+|..++ .++++|++|+|++|.+.+.+|..|+++++|++|+|++|+ +++ .+|..+..+
T Consensus 229 ~------~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~ 302 (636)
T 4eco_A 229 N------ENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAP 302 (636)
T ss_dssp C------TTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSG
T ss_pred c------cccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccc
Confidence 0 000000000444432 135555555555555555555555555555555555555 554 444444443
Q ss_pred --ccccceecccccCCCCCCCChhhhhhhcccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCccccCCCccccC
Q 039720 303 --PNLSKLYLGRNNLGTRTSTDLDFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEIRN 380 (973)
Q Consensus 303 --~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~ 380 (973)
++|++|+|++|+++.++. ...+.++++|+.|++++ |+++|.+| .+..
T Consensus 303 ~l~~L~~L~L~~n~l~~ip~-----~~~l~~l~~L~~L~L~~-------------------------N~l~g~ip-~~~~ 351 (636)
T 4eco_A 303 VGEKIQIIYIGYNNLKTFPV-----ETSLQKMKKLGMLECLY-------------------------NQLEGKLP-AFGS 351 (636)
T ss_dssp GGGTCCEEECCSSCCSSCCC-----HHHHTTCTTCCEEECCS-------------------------CCCEEECC-CCEE
T ss_pred cCCCCCEEECCCCcCCccCc-----hhhhccCCCCCEEeCcC-------------------------CcCccchh-hhCC
Confidence 555555555555543221 00223333444433333 33345666 7788
Q ss_pred CCCcCEEEcccccCCCCCCccccCCCC-CCeEEccCcccCCCCCCccCCcC--ccceEEcCCCccccccccccc------
Q 039720 381 LFNLNGLGLEYNQLTGTIPPAIGELRN-LQYLGLVGNNIRGIIPDPIGNLT--LLNVLQLGFNKLQGSIPSYLG------ 451 (973)
Q Consensus 381 l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~~~~------ 451 (973)
+++|++|+|++|+++ .+|..+..+++ |++|++++|+++ .+|..+..++ +|++|++++|++++.+|..+.
T Consensus 352 l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~ 429 (636)
T 4eco_A 352 EIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTP 429 (636)
T ss_dssp EEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSC
T ss_pred CCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhccccccc
Confidence 899999999999999 88999999999 999999999999 7888888765 999999999999999999998
Q ss_pred -cccccccccccCcccccCCCccccccccccceeeccCCcccccCCccccc-c-------cccceeccccCccccccccc
Q 039720 452 -KCQNLMQLSAPNNKLNGTLPPQIFGITTLSKLLDLSENHLSGSIPLEVGN-L-------KSLVQLDISRNNFSNEIPVT 522 (973)
Q Consensus 452 -~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~-l-------~~L~~L~ls~N~l~~~~p~~ 522 (973)
.+++|+.|++++|++. .+|..++.....++.|+|++|+++ .+|..+.. . ++|+.|+|++|+++ .+|..
T Consensus 430 ~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~ 506 (636)
T 4eco_A 430 FKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDD 506 (636)
T ss_dssp CCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGG
T ss_pred ccCCCCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChh
Confidence 8889999999999999 889888764444469999999999 56654433 2 39999999999999 78888
Q ss_pred cc--CccchhhhcccCcccccccccchhhhccCCeecC------CCCccccccCCCCCCCCccceEeccCCcCcCcCCCC
Q 039720 523 LS--ACTTLEYLLMQGNSFNGSIPQSLNALKSIKELDL------SCNNLSGQIPIHLGNLPFLEYLNLSYNHFEGKVPKK 594 (973)
Q Consensus 523 ~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L------s~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 594 (973)
+. .+++|+.|+|++|+|++ +|..+..+++|++|+| ++|++.+.+|..+..+++|++|+|++|++ +.+|..
T Consensus 507 ~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~ 584 (636)
T 4eco_A 507 FRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEK 584 (636)
T ss_dssp GSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC
T ss_pred hhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHh
Confidence 87 99999999999999997 8999999999999999 56889999999999999999999999999 566765
Q ss_pred CCCCCccccccccCccccCCC
Q 039720 595 GVFSNETRISLTGNEQFCGGL 615 (973)
Q Consensus 595 ~~~~~~~~l~~~~N~~~cg~~ 615 (973)
.+++++.+++.+|++.|-..
T Consensus 585 -~~~~L~~L~Ls~N~l~~~~~ 604 (636)
T 4eco_A 585 -ITPNISVLDIKDNPNISIDL 604 (636)
T ss_dssp -CCTTCCEEECCSCTTCEEEC
T ss_pred -HhCcCCEEECcCCCCccccH
Confidence 34899999999999988543
No 26
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=5.5e-49 Score=422.04 Aligned_cols=250 Identities=25% Similarity=0.346 Sum_probs=201.8
Q ss_pred CcCCccccccceeEEEEEECCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceEEEE
Q 039720 677 SSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK--KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFKAIV 754 (973)
Q Consensus 677 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 754 (973)
++.++||+|+||+||+|+++.++..||+|++.... ....+.+.+|++++++++|||||++++++... .......++|
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~-~~~~~~~~lv 107 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST-VKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEE-ETTEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeec-cCCCcEEEEE
Confidence 66778999999999999999999999999997543 33456799999999999999999999987653 2344678999
Q ss_pred EeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCcEEecC-CCcEEEeccccchhccC
Q 039720 755 YEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPP--IVHGDLKPSNVLLDH-DMVAHVSDFGLARFLSH 831 (973)
Q Consensus 755 ~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~--ivHrDik~~NILl~~-~~~~kl~Dfg~a~~~~~ 831 (973)
||||++|+|.+++.+.+.+++..+..|+.||+.||+|||++ + ||||||||+|||++. ++.+||+|||+|+....
T Consensus 108 mEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~---~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 108 TELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 99999999999999888888999999999999999999998 6 999999999999984 79999999999985422
Q ss_pred CCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCccccc
Q 039720 832 HPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKVMG 911 (973)
Q Consensus 832 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
......+||+.|||||++.+ .|+.++|||||||++|||+||+.||........ + ......
T Consensus 185 ----------~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~-~---~~~i~~----- 244 (290)
T 3fpq_A 185 ----------SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ-I---YRRVTS----- 244 (290)
T ss_dssp ----------TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH-H---HHHHTT-----
T ss_pred ----------CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHH-H---HHHHHc-----
Confidence 23345689999999998865 699999999999999999999999975432211 1 111000
Q ss_pred ccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 912 IVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
...+ ...+....+++.+++.+||+.||++|||++|++++
T Consensus 245 ~~~~--------~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 245 GVKP--------ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp TCCC--------GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCCC--------CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0000 01111223456789999999999999999999864
No 27
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.6e-49 Score=431.45 Aligned_cols=258 Identities=24% Similarity=0.359 Sum_probs=208.5
Q ss_pred hcCCcCCccccccceeEEEEEEC-----CCCcEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCC
Q 039720 674 KEFSSSNRIGKGSFGFVYKGNLG-----EDGMSVAVKVMNLDK-KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKG 747 (973)
Q Consensus 674 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 747 (973)
.++++.++||+|+||+||+|++. .+++.||||+++... ....++|.+|+.++++++|||||+++|+|..
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~----- 100 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTK----- 100 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-----
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEE-----
Confidence 35677889999999999999874 367899999997543 3345789999999999999999999999764
Q ss_pred CceEEEEEeeccCCCHHHHhhhc----------------CCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEE
Q 039720 748 ADFKAIVYEYMQYGSVDDWLHHT----------------NDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVL 811 (973)
Q Consensus 748 ~~~~~lv~e~~~~gsL~~~l~~~----------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NIL 811 (973)
....++|||||++|+|.+++... ..+++.++.+|+.|||+||+|||++ +||||||||+|||
T Consensus 101 ~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NIL 177 (308)
T 4gt4_A 101 DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVL 177 (308)
T ss_dssp SSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred CCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceE
Confidence 36789999999999999999653 2345677899999999999999999 9999999999999
Q ss_pred ecCCCcEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCC
Q 039720 812 LDHDMVAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNM 890 (973)
Q Consensus 812 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~ 890 (973)
+++++++||+|||+|+.....+ .........||+.|+|||++.+..|+.++|||||||++|||+| |+.||...
T Consensus 178 l~~~~~~Ki~DFGlar~~~~~~------~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~ 251 (308)
T 4gt4_A 178 VYDKLNVKISDLGLFREVYAAD------YYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY 251 (308)
T ss_dssp ECGGGCEEECCSCCBCGGGGGG------CBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTC
T ss_pred ECCCCCEEECCcccceeccCCC------ceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCC
Confidence 9999999999999998764321 1222334579999999999999999999999999999999999 89999865
Q ss_pred CCCCccHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccc
Q 039720 891 FNDGLTLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGE 964 (973)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 964 (973)
... ++...... ......+.+++..+.+++.+||+.||++||||+||++.|++..+
T Consensus 252 ~~~--~~~~~i~~-----------------~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~n 306 (308)
T 4gt4_A 252 SNQ--DVVEMIRN-----------------RQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWGN 306 (308)
T ss_dssp CHH--HHHHHHHT-----------------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCC
T ss_pred CHH--HHHHHHHc-----------------CCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhccC
Confidence 322 11111110 00112234566778899999999999999999999999998764
No 28
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1e-49 Score=429.23 Aligned_cols=249 Identities=21% Similarity=0.329 Sum_probs=207.6
Q ss_pred hcCCcCCccccccceeEEEEEECCCCcEEEEEEeecc---cchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCce
Q 039720 674 KEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLD---KKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADF 750 (973)
Q Consensus 674 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 750 (973)
++|++.+.||+|+||+||+|+++.+|+.||||++... .....+.+.+|+++|++++|||||++++++. +++.
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~-----~~~~ 106 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ-----DDEK 106 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSSE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE-----eCCE
Confidence 5799999999999999999999999999999999753 2334577999999999999999999999854 4589
Q ss_pred EEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhcc
Q 039720 751 KAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLS 830 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~ 830 (973)
.|+|||||+||+|.+++.+.+.+++.+++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+.
T Consensus 107 ~yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~ 183 (311)
T 4aw0_A 107 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS 183 (311)
T ss_dssp EEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecC
Confidence 999999999999999999988899999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCcccc
Q 039720 831 HHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKVM 910 (973)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
... ........+||+.|||||++.+..|+.++||||+||++|||++|+.||...... .+ +...... .
T Consensus 184 ~~~------~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--~~--~~~i~~~-~-- 250 (311)
T 4aw0_A 184 PES------KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG--LI--FAKIIKL-E-- 250 (311)
T ss_dssp TTT------TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HH--HHHHHHT-C--
T ss_pred CCC------CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HH--HHHHHcC-C--
Confidence 321 123344578999999999999999999999999999999999999999753221 11 1111100 0
Q ss_pred cccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 039720 911 GIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVV 956 (973)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 956 (973)
..+ + .....++.+++.+|++.||++|||++|++
T Consensus 251 ----~~~------p---~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 251 ----YDF------P---EKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp ----CCC------C---TTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred ----CCC------C---cccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 001 1 12234567888899999999999999863
No 29
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=8.8e-49 Score=416.54 Aligned_cols=247 Identities=25% Similarity=0.346 Sum_probs=192.5
Q ss_pred hcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCce
Q 039720 674 KEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK---KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADF 750 (973)
Q Consensus 674 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 750 (973)
++|++.+.||+|+||+||+|+++.+|+.||||+++... ....+.+.+|+++++.++|||||++++++. +++.
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~-----~~~~ 87 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK-----SKDE 87 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEE-----CSSE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEE-----ECCE
Confidence 68999999999999999999999999999999997542 334567899999999999999999999854 4588
Q ss_pred EEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhcc
Q 039720 751 KAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLS 830 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~ 830 (973)
.|+||||+ +|+|.+++.+.+.+++.++..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+|+...
T Consensus 88 ~~ivmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~ 163 (275)
T 3hyh_A 88 IIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163 (275)
T ss_dssp EEEEEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC----
T ss_pred EEEEEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecC
Confidence 99999999 689999999888899999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCccCCCCCcccccccccccccCcccccCCCC-CcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCccc
Q 039720 831 HHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDL-SMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKV 909 (973)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
.. ......+||+.|+|||++.+..| +.++||||+||++|||+||+.||...... .+....... .
T Consensus 164 ~~---------~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~--~~~~~i~~~---~- 228 (275)
T 3hyh_A 164 DG---------NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP--VLFKNISNG---V- 228 (275)
T ss_dssp --------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHT---C-
T ss_pred CC---------CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHcC---C-
Confidence 32 22335679999999999998876 57999999999999999999999753211 111111000 0
Q ss_pred ccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 910 MGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
...+...+..+.+++.+||+.||++|||++|++++
T Consensus 229 --------------~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 229 --------------YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp --------------CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred --------------CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 00011223456788999999999999999999874
No 30
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.6e-49 Score=467.15 Aligned_cols=454 Identities=20% Similarity=0.249 Sum_probs=247.5
Q ss_pred EEeeccCccccccCCCcCCCCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEeccccc
Q 039720 67 LDLESQNIGGFLSPYIGNLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNL 146 (973)
Q Consensus 67 l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~ 146 (973)
+|+++++++ .+|..+. ++|++|+|++|++++..|..|+++++|++|+|++|.+++
T Consensus 5 l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~---------------------- 59 (520)
T 2z7x_B 5 VDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQY---------------------- 59 (520)
T ss_dssp EECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCE----------------------
T ss_pred EecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCC----------------------
Confidence 455555554 3444443 455555555555554444455555555555555555554
Q ss_pred ccchhhhhccccccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCC-CCCCcccCCCccceeccCCCCccccCCcc
Q 039720 147 VGEIQAIIGNWLKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDG-RIPDSLGQLRNLNYLGTSENDFSGMFPLS 225 (973)
Q Consensus 147 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~ 225 (973)
..|..|.++++|++|+|++|+++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|.+++ ..
T Consensus 60 --~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~ 131 (520)
T 2z7x_B 60 --LDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SS 131 (520)
T ss_dssp --EEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GG
T ss_pred --cChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hh
Confidence 44444444555555555555554 34433 45555555555555543 244555555555555555555543 23
Q ss_pred ccCCCCC--cEEEccCCcc--ccCCCcccccCCC-CCcEEEccCCcccccCCc-cccCCCCCCEEEccCCc-------cc
Q 039720 226 VCNISSL--DEAYLFKNRF--KGSLPVCLGFNLP-KLTVLVVAQNNLTGFLPQ-SLSNASKLEWLELNENH-------FS 292 (973)
Q Consensus 226 ~~~l~~L--~~L~L~~N~l--~~~ip~~~~~~l~-~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~-------l~ 292 (973)
+..+++| ++|++++|++ .+.+|..+. .+. +...+++++|.+.+.++. .+.++++|+.|++++|. +.
T Consensus 132 ~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~-~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~ 210 (520)
T 2z7x_B 132 VLPIAHLNISKVLLVLGETYGEKEDPEGLQ-DFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFL 210 (520)
T ss_dssp GGGGTTSCEEEEEEEECTTTTSSCCTTTTT-TCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHH
T ss_pred ccccccceeeEEEeeccccccccccccccc-ccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceee
Confidence 3444444 5555555555 444443332 222 122445555555443332 45555666666666655 44
Q ss_pred ccCcccccCcccccceecccccCCCCCCCChhhhhhhcccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCcccc
Q 039720 293 GQVRINFNSLPNLSKLYLGRNNLGTRTSTDLDFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISG 372 (973)
Q Consensus 293 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~ 372 (973)
+.++ .|..+++|+.|++++|.++.... ........+++|++|++++|++. |
T Consensus 211 ~~~~-~l~~l~~L~~L~l~~~~l~~~~~---~~~~~~~~~~~L~~L~l~~n~l~-------------------------~ 261 (520)
T 2z7x_B 211 SILA-KLQTNPKLSNLTLNNIETTWNSF---IRILQLVWHTTVWYFSISNVKLQ-------------------------G 261 (520)
T ss_dssp HHHH-GGGGCTTCCEEEEEEEEEEHHHH---HHHHHHHHTSSCSEEEEEEEEEE-------------------------S
T ss_pred cchh-hhccccchhhccccccccCHHHH---HHHHHHhhhCcccEEEeeccccc-------------------------C
Confidence 4443 55566666666666655432100 00000001223444444444333 3
Q ss_pred CCCccc-----cCCCCcCEEEcccccCCCCCC-ccccCC---CCCCeEEccCcccCCCCCCccCCcCccceEEcCCCccc
Q 039720 373 TIPPEI-----RNLFNLNGLGLEYNQLTGTIP-PAIGEL---RNLQYLGLVGNNIRGIIPDPIGNLTLLNVLQLGFNKLQ 443 (973)
Q Consensus 373 ~~p~~~-----~~l~~L~~L~Ls~N~l~~~~p-~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 443 (973)
.+|..+ ..+++|+.+++++|.+ .+| .++..+ .+|+.|++++|.+.... .+..+++|++|++++|+++
T Consensus 262 ~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~ 337 (520)
T 2z7x_B 262 QLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLT 337 (520)
T ss_dssp CCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCC
T ss_pred ccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccC
Confidence 344444 6666777777777776 344 445444 56777777777665322 1256667777777777777
Q ss_pred cccccccccccccccccccCccccc--CCCccccccccccceeeccCCcccccCCc-ccccccccceeccccCccccccc
Q 039720 444 GSIPSYLGKCQNLMQLSAPNNKLNG--TLPPQIFGITTLSKLLDLSENHLSGSIPL-EVGNLKSLVQLDISRNNFSNEIP 520 (973)
Q Consensus 444 ~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~ls~N~l~~~~p 520 (973)
+.+|..+..+++|++|++++|++.+ .+|..+..+..+. .|++++|++++.+|. .+..+++|+.|++++|++++.+|
T Consensus 338 ~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~-~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~ 416 (520)
T 2z7x_B 338 DTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQ-QLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIF 416 (520)
T ss_dssp TTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCC-EEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGG
T ss_pred hhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCC-EEECCCCcCCcccccchhccCccCCEEECcCCCCCcchh
Confidence 6667677777777777777776663 3333344444442 566666666553443 35566677777777777766666
Q ss_pred ccccCccchhhhcccCcccccccccchhhhccCCeecCCCCccccccCCC-CCCCCccceEeccCCcCcCcCC
Q 039720 521 VTLSACTTLEYLLMQGNSFNGSIPQSLNALKSIKELDLSCNNLSGQIPIH-LGNLPFLEYLNLSYNHFEGKVP 592 (973)
Q Consensus 521 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~ls~N~l~~~~p 592 (973)
..+. ++|+.|++++|+|+ .+|..+..+++|++|+|++|+|+ .+|.. +..+++|++|++++|++++..+
T Consensus 417 ~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 417 RCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp GSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred hhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCcccCC
Confidence 5554 56777777777776 66666667777777777777777 45554 6667777777777777766544
No 31
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.8e-48 Score=436.55 Aligned_cols=252 Identities=23% Similarity=0.328 Sum_probs=210.0
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceEE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFKA 752 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 752 (973)
.+.|++.++||+|+||+||+|+++.+|+.||||++........+.+.+|+.+|+.++|||||++++++.. .+..|
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~-----~~~~~ 224 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-----GDELW 224 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEE-----TTEEE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEE-----CCEEE
Confidence 3579999999999999999999999999999999987766666779999999999999999999998655 47899
Q ss_pred EEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhccCC
Q 039720 753 IVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLSHH 832 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~~~ 832 (973)
+|||||+||+|.+++... .+.+.+++.++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.+...
T Consensus 225 iVmEy~~gG~L~~~i~~~-~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~ 300 (423)
T 4fie_A 225 VVMEFLEGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 300 (423)
T ss_dssp EEEECCTTEEHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSS
T ss_pred EEEeCCCCCcHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCC
Confidence 999999999999998754 578889999999999999999999 9999999999999999999999999999876432
Q ss_pred CCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCcccccc
Q 039720 833 PFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKVMGI 912 (973)
Q Consensus 833 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
.......+||+.|||||++.+..|+.++|||||||++|||++|+.||...... .+.......
T Consensus 301 --------~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--~~~~~i~~~-------- 362 (423)
T 4fie_A 301 --------VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAMKMIRDN-------- 362 (423)
T ss_dssp --------CCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHS--------
T ss_pred --------CccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--HHHHHHHcC--------
Confidence 22334578999999999999999999999999999999999999999753221 111111110
Q ss_pred cCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 913 VDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
..+.. .....+...+.+++.+||+.||++|||++|++++
T Consensus 363 ~~~~~-------~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 363 LPPRL-------KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp CCCCC-------SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCCCC-------cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 00110 1112234566788899999999999999999874
No 32
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=7.9e-49 Score=465.12 Aligned_cols=464 Identities=20% Similarity=0.160 Sum_probs=379.7
Q ss_pred CEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccceeeccCC
Q 039720 89 RVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLYGN 168 (973)
Q Consensus 89 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n 168 (973)
++||+++|+++ .+|..+. ++|++|+|++|.++ +..|..|.++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~------------------------~~~~~~~~~l~~L~~L~Ls~n 55 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYIS------------------------ELWTSDILSLSKLRILIISHN 55 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCC------------------------CCCHHHHTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCccc------------------------ccChhhccccccccEEecCCC
Confidence 35666666666 4665554 56666666666655 344566777889999999999
Q ss_pred cccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccc-cCCccccCCCCCcEEEccCCccccCCC
Q 039720 169 QLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSG-MFPLSVCNISSLDEAYLFKNRFKGSLP 247 (973)
Q Consensus 169 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~ip 247 (973)
++++..|..|+++++|++|+|++|+++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|++++
T Consensus 56 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~--- 129 (520)
T 2z7x_B 56 RIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK--- 129 (520)
T ss_dssp CCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---
T ss_pred ccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---
Confidence 999888999999999999999999999 67766 89999999999999997 478999999999999999999985
Q ss_pred cccccCCCCC--cEEEccCCcc--cccCCccccCCC-CCCEEEccCCcccccCc-ccccCcccccceecccccCCCCCCC
Q 039720 248 VCLGFNLPKL--TVLVVAQNNL--TGFLPQSLSNAS-KLEWLELNENHFSGQVR-INFNSLPNLSKLYLGRNNLGTRTST 321 (973)
Q Consensus 248 ~~~~~~l~~L--~~L~Ls~N~l--~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~ 321 (973)
.. +..+++| ++|++++|.+ ++..|..+..+. +...+++++|++.+..+ ..+..+++|+.|++++|........
T Consensus 130 ~~-~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 208 (520)
T 2z7x_B 130 SS-VLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSY 208 (520)
T ss_dssp GG-GGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHH
T ss_pred hh-ccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccce
Confidence 22 3367788 9999999999 888898888876 45578899999876554 5688999999999999972111111
Q ss_pred ChhhhhhhcccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCccccCCCccccCCCCcCEEEcccccCCCCCCcc
Q 039720 322 DLDFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEIRNLFNLNGLGLEYNQLTGTIPPA 401 (973)
Q Consensus 322 ~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 401 (973)
....+..+..+++|+.|+++.|.+.+..+..+.. .+ ..++|++|++++|++++.+|..
T Consensus 209 ~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~---------------------~~-~~~~L~~L~l~~n~l~~~~p~~ 266 (520)
T 2z7x_B 209 FLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQ---------------------LV-WHTTVWYFSISNVKLQGQLDFR 266 (520)
T ss_dssp HHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHH---------------------HH-HTSSCSEEEEEEEEEESCCCCC
T ss_pred eecchhhhccccchhhccccccccCHHHHHHHHH---------------------Hh-hhCcccEEEeecccccCccccc
Confidence 1123346778889999999998877533322211 11 1358999999999999999999
Q ss_pred c-----cCCCCCCeEEccCcccCCCCC-CccCCc---CccceEEcCCCccccccccccccccccccccccCcccccCCCc
Q 039720 402 I-----GELRNLQYLGLVGNNIRGIIP-DPIGNL---TLLNVLQLGFNKLQGSIPSYLGKCQNLMQLSAPNNKLNGTLPP 472 (973)
Q Consensus 402 ~-----~~l~~L~~L~L~~N~l~~~~p-~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 472 (973)
+ ..+++|+.+++++|.+ .+| ..+..+ .+|+.|++++|.+.+.. .+..+++|++|++++|++.+.+|.
T Consensus 267 ~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~ 342 (520)
T 2z7x_B 267 DFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFE 342 (520)
T ss_dssp CCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTT
T ss_pred hhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhh
Confidence 8 9999999999999999 455 555555 67999999999987432 126889999999999999988898
Q ss_pred cccccccccceeeccCCcccc--cCCcccccccccceeccccCcccccccc-cccCccchhhhcccCcccccccccchhh
Q 039720 473 QIFGITTLSKLLDLSENHLSG--SIPLEVGNLKSLVQLDISRNNFSNEIPV-TLSACTTLEYLLMQGNSFNGSIPQSLNA 549 (973)
Q Consensus 473 ~~~~~~~l~~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 549 (973)
.+..+..+. .|++++|++++ .+|..++.+++|+.|++++|++++.+|. .+..+++|+.|++++|++++.+|..+.
T Consensus 343 ~~~~l~~L~-~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~- 420 (520)
T 2z7x_B 343 NCGHLTELE-TLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP- 420 (520)
T ss_dssp TCCCCSSCC-EEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC-
T ss_pred hhccCCCCC-EEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc-
Confidence 888887775 99999999997 5667899999999999999999985665 488999999999999999988887764
Q ss_pred hccCCeecCCCCccccccCCCCCCCCccceEeccCCcCcCcCCC-CCCCCCccccccccCccccCCCC
Q 039720 550 LKSIKELDLSCNNLSGQIPIHLGNLPFLEYLNLSYNHFEGKVPK-KGVFSNETRISLTGNEQFCGGLG 616 (973)
Q Consensus 550 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~~~~~~l~~~~N~~~cg~~~ 616 (973)
++|+.|+|++|+|+ .+|..+..+++|++|++++|++++.++. ...+++++.+++.+||+.|+|..
T Consensus 421 -~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 486 (520)
T 2z7x_B 421 -PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 486 (520)
T ss_dssp -TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred -ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCCc
Confidence 79999999999999 8999888999999999999999976655 46688899999999999998754
No 33
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=8.5e-49 Score=422.45 Aligned_cols=264 Identities=20% Similarity=0.250 Sum_probs=204.7
Q ss_pred hcCCcCCccccccceeEEEEEEC---CCCcEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCC
Q 039720 674 KEFSSSNRIGKGSFGFVYKGNLG---EDGMSVAVKVMNLDK--KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGA 748 (973)
Q Consensus 674 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 748 (973)
++|++.+.||+|+||+||+|++. .+++.||||+++... ......+.+|++++++++|||||++++++.+ +
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-----~ 98 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQT-----E 98 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEE-----T
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-----C
Confidence 57999999999999999999884 468899999997442 2233468889999999999999999998654 4
Q ss_pred ceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchh
Q 039720 749 DFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 828 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~ 828 (973)
+..|+|||||+||+|.+++.+.+.+++.++..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+|+.
T Consensus 99 ~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~ 175 (304)
T 3ubd_A 99 GKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKE 175 (304)
T ss_dssp TEEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred CEEEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEeccccccee
Confidence 88999999999999999999988899999999999999999999999 999999999999999999999999999986
Q ss_pred ccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCcc
Q 039720 829 LSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKK 908 (973)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 908 (973)
.... .......+||+.|||||++.+..|+.++||||+||++|||+||+.||...... .+.. .... .
T Consensus 176 ~~~~--------~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~--~~~~--~i~~-~- 241 (304)
T 3ubd_A 176 SIDH--------EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK--ETMT--MILK-A- 241 (304)
T ss_dssp -------------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHH--HHHH-C-
T ss_pred ccCC--------CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH--HHHH--HHHc-C-
Confidence 5332 22334567999999999999999999999999999999999999999754221 1111 1100 0
Q ss_pred cccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCH-----HHHHHH--H-----HhccccccCCCCCC
Q 039720 909 VMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQM-----TAVVKK--L-----CAVGEIFIGPPIIG 973 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~~--L-----~~~~~~~~~~~~~~ 973 (973)
. ...+..++.++.+++.+||+.||++|||+ +|++++ + +++...-..||.+|
T Consensus 242 -------~-------~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~idw~~l~~~~~~pP~~P 304 (304)
T 3ubd_A 242 -------K-------LGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKP 304 (304)
T ss_dssp -------C-------CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSSCC
T ss_pred -------C-------CCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCCCHHHHHhCCCCcCcCC
Confidence 0 01112234566788999999999999985 677753 2 22333344677765
No 34
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=5.3e-48 Score=421.03 Aligned_cols=274 Identities=22% Similarity=0.278 Sum_probs=204.1
Q ss_pred hcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceEEE
Q 039720 674 KEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFKAI 753 (973)
Q Consensus 674 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 753 (973)
++|.+.++||+|+||+||+|++ +|+.||||+++.... .......|+..+.+++|||||+++++|... .......++
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~-~~~~~~~~l 78 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKD-NGTWTQLWL 78 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEE-CSSSEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEec-CCCceEEEE
Confidence 5688889999999999999998 789999999964432 222334566666788999999999998763 222346899
Q ss_pred EEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcC-----CCCeEecCCCCCcEEecCCCcEEEeccccchh
Q 039720 754 VYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHC-----QPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 828 (973)
Q Consensus 754 v~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-----~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~ 828 (973)
|||||++|+|.++++.. ..++..+.+++.|++.||+|||+++ .++||||||||+|||++.++++||+|||+|+.
T Consensus 79 V~Ey~~~gsL~~~l~~~-~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~ 157 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 157 (303)
T ss_dssp EEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred EecCCCCCcHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcc
Confidence 99999999999999765 5677888999999999999999762 45899999999999999999999999999987
Q ss_pred ccCCCCccCCCCCcccccccccccccCcccccCC------CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCc-------
Q 039720 829 LSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGG------DLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGL------- 895 (973)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~------- 895 (973)
....... .........||+.|+|||++.+. .|+.++|||||||++|||+||+.||........
T Consensus 158 ~~~~~~~----~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~ 233 (303)
T 3hmm_A 158 HDSATDT----IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP 233 (303)
T ss_dssp EETTTTE----ESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSC
T ss_pred ccCCCCc----eeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccc
Confidence 6543210 01122345799999999998764 467899999999999999999888754332211
Q ss_pred ---cHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccc
Q 039720 896 ---TLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGE 964 (973)
Q Consensus 896 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 964 (973)
.......... ....++.+.. .....++.+.+.+++.+||+.||++||||+||++.|+++.+
T Consensus 234 ~~~~~~~~~~~~~----~~~~rp~~p~----~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~ 297 (303)
T 3hmm_A 234 SDPSVEEMRKVVC----EQKLRPNIPN----RWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp SSCCHHHHHHHHT----TSCCCCCCCG----GGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHh----cccCCCCCCc----cccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 1111111110 1111111111 11223567788999999999999999999999999998854
No 35
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=9.8e-48 Score=424.84 Aligned_cols=266 Identities=21% Similarity=0.341 Sum_probs=212.2
Q ss_pred HHHHHHhhcCCcCCccccccceeEEEEEECCC-----CcEEEEEEeecccc-hhHHHHHHHHHHHHhcCC-CCceeEEeE
Q 039720 667 AELSKATKEFSSSNRIGKGSFGFVYKGNLGED-----GMSVAVKVMNLDKK-GATKSFVAECEALRNIRH-RNLIKIITI 739 (973)
Q Consensus 667 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h-~niv~~~~~ 739 (973)
++++...++|++.+.||+|+||+||+|++..+ ++.||||+++.... ...+.+.+|+++|+++.| ||||+++++
T Consensus 57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~ 136 (353)
T 4ase_A 57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 136 (353)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEE
Confidence 33444567899999999999999999998643 36899999975433 345679999999999965 999999999
Q ss_pred eeecccCCCceEEEEEeeccCCCHHHHhhhcC----------------CCchhhHHHHHHHHHHHHHHHHhcCCCCeEec
Q 039720 740 CSSIDFKGADFKAIVYEYMQYGSVDDWLHHTN----------------DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHG 803 (973)
Q Consensus 740 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~----------------~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHr 803 (973)
|... ....++|||||++|+|.++++... .+++.++..++.|||+||+|||++ +||||
T Consensus 137 ~~~~----~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHR 209 (353)
T 4ase_A 137 CTKP----GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 209 (353)
T ss_dssp ECCT----TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred EEec----CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecC
Confidence 7542 356899999999999999997532 245677899999999999999999 99999
Q ss_pred CCCCCcEEecCCCcEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-
Q 039720 804 DLKPSNVLLDHDMVAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT- 882 (973)
Q Consensus 804 Dik~~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt- 882 (973)
||||+|||++.++.+||+|||+|+.+.... .........||+.|||||++.+..|+.++|||||||++|||+|
T Consensus 210 DLK~~NILl~~~~~vKi~DFGlar~~~~~~------~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~ 283 (353)
T 4ase_A 210 DLAARNILLSEKNVVKICDFGLARDIYKDP------DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 283 (353)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCT------TSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTT
T ss_pred ccCccceeeCCCCCEEECcchhhhhcccCC------CceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhC
Confidence 999999999999999999999998664322 1223334679999999999999999999999999999999998
Q ss_pred CCCCCCCCCCCCccHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhc
Q 039720 883 RRRPTDNMFNDGLTLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAV 962 (973)
Q Consensus 883 g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 962 (973)
|+.||........ +...... ...+..+..++.++.++|.+||+.||++||||+||+++|+.+
T Consensus 284 G~~Pf~~~~~~~~-~~~~i~~-----------------g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~l 345 (353)
T 4ase_A 284 GASPYPGVKIDEE-FCRRLKE-----------------GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345 (353)
T ss_dssp SCCSSTTCCCSHH-HHHHHHH-----------------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHH-HHHHHHc-----------------CCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 9999986543221 1111111 001122233456788999999999999999999999999876
Q ss_pred c
Q 039720 963 G 963 (973)
Q Consensus 963 ~ 963 (973)
.
T Consensus 346 l 346 (353)
T 4ase_A 346 L 346 (353)
T ss_dssp H
T ss_pred H
Confidence 4
No 36
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=6.8e-47 Score=409.93 Aligned_cols=261 Identities=22% Similarity=0.373 Sum_probs=193.2
Q ss_pred hcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccc-hhHHHHHHHHHHHHhcCCCCceeEEeEeeeccc-------
Q 039720 674 KEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKK-GATKSFVAECEALRNIRHRNLIKIITICSSIDF------- 745 (973)
Q Consensus 674 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~------- 745 (973)
++|++.+.||+|+||+||+|+++.+|+.||||+++.... ...+.+.+|+++|++++|||||++++++.+...
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 569999999999999999999999999999999975543 345778999999999999999999998765321
Q ss_pred CCCceEEEEEeeccCCCHHHHhhhcCCCch---hhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEec
Q 039720 746 KGADFKAIVYEYMQYGSVDDWLHHTNDKLE---VGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSD 822 (973)
Q Consensus 746 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~---~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~D 822 (973)
......|+|||||++|+|.+++.......+ ..++.++.||++||+|||++ +||||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEcc
Confidence 123457999999999999999987665443 34778999999999999999 999999999999999999999999
Q ss_pred cccchhccCCCCccC----CCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHh
Q 039720 823 FGLARFLSHHPFLVA----PEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLH 898 (973)
Q Consensus 823 fg~a~~~~~~~~~~~----~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~ 898 (973)
||+|+.......... ..........+||+.|||||++.+..|+.++|||||||++|||++ ||..... ...
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~---~~~ 235 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME---RVR 235 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH---HHH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH---HHH
Confidence 999987654321000 011122334679999999999999999999999999999999996 7753211 111
Q ss_pred hhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 899 GYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
...... ....+...........+++.+||+.||++|||++|+++.
T Consensus 236 ~~~~~~---------------~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 236 TLTDVR---------------NLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HHHHHH---------------TTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHh---------------cCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 111100 011122334444566789999999999999999999873
No 37
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=2.6e-46 Score=455.20 Aligned_cols=522 Identities=20% Similarity=0.201 Sum_probs=427.0
Q ss_pred eeEeeCC---------CCeEEEEEeeccCccccccCCCcCCCCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCC
Q 039720 54 GVTCGHR---------HQRVTKLDLESQNIGGFLSPYIGNLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSG 124 (973)
Q Consensus 54 gv~C~~~---------~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~ 124 (973)
-|.|... ...++.|||++|.+++..+.++.++++|++|||++|+|++..|..|++|++|++|+|++|+|++
T Consensus 35 ~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~ 114 (635)
T 4g8a_A 35 TYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS 114 (635)
T ss_dssp EEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCE
T ss_pred EEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCC
Confidence 5778743 2368999999999997767789999999999999999997777789999999999999999996
Q ss_pred CCCcccccCCCccceEecccccccchhhhhccccccceeeccCCcccc-cCCCCCCCCCcccEEEccCCcCCCCCCCccc
Q 039720 125 KIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLYGNQLTG-QLPPSIGNLSALQTFDIAGNKLDGRIPDSLG 203 (973)
Q Consensus 125 ~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 203 (973)
..|..|.++++|++|++++|++.+..+..|+++++|++|+|++|.+++ .+|..++++++|++|+|++|++++..|..|.
T Consensus 115 l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~ 194 (635)
T 4g8a_A 115 LALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLR 194 (635)
T ss_dssp ECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGH
T ss_pred CCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccccccccc
Confidence 666779999999999999999998888889999999999999999975 4688899999999999999999988888888
Q ss_pred CCCccc----eeccCCCCccccCCccccCCCCCcEEEccCCccccCCCcccccCCCCCcEEEccCCc------ccccCCc
Q 039720 204 QLRNLN----YLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNN------LTGFLPQ 273 (973)
Q Consensus 204 ~L~~L~----~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~------l~~~~p~ 273 (973)
.+.+++ .++++.|.++...+..+. ...++.+++..|.....++...+.++..++...+..+. +......
T Consensus 195 ~L~~l~~~~~~~~ls~n~l~~i~~~~~~-~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~ 273 (635)
T 4g8a_A 195 VLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKS 273 (635)
T ss_dssp HHHTCTTCCCEEECTTCCCCEECTTTTT-TCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTT
T ss_pred chhhhhhhhhhhhcccCcccccCccccc-chhhhhhhhhcccccccccchhhcCCccccccccccccccccccccccccc
Confidence 877665 588999999876665554 45678899999887766666656678888877765433 3333445
Q ss_pred cccCCCCCCEEEccCCcccc---cCcccccCcccccceecccccCCCCCCCChhhhhhhcccccceeeccccccccCCCC
Q 039720 274 SLSNASKLEWLELNENHFSG---QVRINFNSLPNLSKLYLGRNNLGTRTSTDLDFITLLTNCSKLVKLGLVFNRFGGALP 350 (973)
Q Consensus 274 ~~~~l~~L~~L~Ls~N~l~~---~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~~p 350 (973)
.+..+..+..+++..+.... .....+..+.+++.+.+.+|.+..+. .+.....|+.|++..|.+.+..+
T Consensus 274 ~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--------~~~~~~~L~~L~l~~~~~~~~~~ 345 (635)
T 4g8a_A 274 ALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--------DFSYNFGWQHLELVNCKFGQFPT 345 (635)
T ss_dssp TTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECG--------GGGSCCCCSEEEEESCEESSCCC
T ss_pred ccccccchhhhhhhhhhhcccccchhhhhhhhccccccccccccccccc--------ccccchhhhhhhcccccccCcCc
Confidence 56666667766666554332 23345667778888888888765432 23455678888888888775544
Q ss_pred hhhhhhhhhhhHhhhcCCccccCCCccccCCCCcCEEEcccccCC--CCCCccccCCCCCCeEEccCcccCCCCCCccCC
Q 039720 351 HSIANLSTTMTLIAMAGNQISGTIPPEIRNLFNLNGLGLEYNQLT--GTIPPAIGELRNLQYLGLVGNNIRGIIPDPIGN 428 (973)
Q Consensus 351 ~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 428 (973)
..+ ..++.+.+.+|.+... .....+++|+.|++++|.+. +..+..+..+.+|++|+++.|.+. ..+..+..
T Consensus 346 ~~l----~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~ 418 (635)
T 4g8a_A 346 LKL----KSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI-TMSSNFLG 418 (635)
T ss_dssp CBC----TTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEE-EECSCCTT
T ss_pred ccc----hhhhhcccccccCCCC--cccccccccccchhhccccccccccccchhhhhhhhhhhccccccc-cccccccc
Confidence 333 3456677778877533 34567899999999999986 346777888999999999999988 45667889
Q ss_pred cCccceEEcCCCccccccc-cccccccccccccccCcccccCCCccccccccccceeeccCCcc-cccCCcccccccccc
Q 039720 429 LTLLNVLQLGFNKLQGSIP-SYLGKCQNLMQLSAPNNKLNGTLPPQIFGITTLSKLLDLSENHL-SGSIPLEVGNLKSLV 506 (973)
Q Consensus 429 l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l-~~~~p~~~~~l~~L~ 506 (973)
+++|+.++++.|......+ ..+..+++++.++++.|.+.+..|..+.....+ +.|++++|.+ .+..|..|..+++|+
T Consensus 419 l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L-~~L~Ls~N~~~~~~~~~~~~~l~~L~ 497 (635)
T 4g8a_A 419 LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSL-EVLKMAGNSFQENFLPDIFTELRNLT 497 (635)
T ss_dssp CTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTC-CEEECTTCEEGGGEECSCCTTCTTCC
T ss_pred cccccchhhhhccccccccccccccccccccccccccccccccccccccchhh-hhhhhhhcccccccCchhhhhccccC
Confidence 9999999999988875554 567889999999999999996666555555555 5999999985 446788999999999
Q ss_pred eeccccCcccccccccccCccchhhhcccCcccccccccchhhhccCCeecCCCCccccccCCCCCCC-CccceEeccCC
Q 039720 507 QLDISRNNFSNEIPVTLSACTTLEYLLMQGNSFNGSIPQSLNALKSIKELDLSCNNLSGQIPIHLGNL-PFLEYLNLSYN 585 (973)
Q Consensus 507 ~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~ls~N 585 (973)
.|+|++|++++..|..|.++++|++|+|++|+|++..|..|..+++|++|||++|+|++..|..+..+ ++|++|+|++|
T Consensus 498 ~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~N 577 (635)
T 4g8a_A 498 FLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQN 577 (635)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTC
T ss_pred EEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCC
Confidence 99999999999999999999999999999999998889999999999999999999999999999998 68999999999
Q ss_pred cCcCcCC
Q 039720 586 HFEGKVP 592 (973)
Q Consensus 586 ~l~~~~p 592 (973)
++.+...
T Consensus 578 p~~C~C~ 584 (635)
T 4g8a_A 578 DFACTCE 584 (635)
T ss_dssp CBCCSGG
T ss_pred CCcccCC
Confidence 9987654
No 38
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=3.2e-46 Score=446.50 Aligned_cols=461 Identities=16% Similarity=0.136 Sum_probs=260.8
Q ss_pred EEEEeeccCccccccCCCcCCCCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEeccc
Q 039720 65 TKLDLESQNIGGFLSPYIGNLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTN 144 (973)
Q Consensus 65 ~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n 144 (973)
..+|++++++++ +|..+. ++|++|+|++|++++..|..|+++++|++|+|++|.+++..|..|+++++|++|++++|
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 667888888875 776654 78889999999888777778888888999999888888777777777777777777777
Q ss_pred ccccchhhhhccccccceeeccCCcccc-cCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCcc--ceeccCCCCc--c
Q 039720 145 NLVGEIQAIIGNWLKIERLSLYGNQLTG-QLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNL--NYLGTSENDF--S 219 (973)
Q Consensus 145 ~~~~~~~~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L--~~L~Ls~N~l--~ 219 (973)
++. .+|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|++++. .+..+++| ++|++++|.+ +
T Consensus 111 ~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~ 184 (562)
T 3a79_B 111 RLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIK 184 (562)
T ss_dssp CCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCC
T ss_pred cCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeeccccccc
Confidence 766 44444 56667777777777664 2345666677777777777766542 34444444 6666666666 5
Q ss_pred ccCCccccCCC-CCcEEEccCCccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCccc
Q 039720 220 GMFPLSVCNIS-SLDEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRIN 298 (973)
Q Consensus 220 ~~~p~~~~~l~-~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 298 (973)
+..|..+..+. ..-.++++.|.+.+.++...+.++++|+.|++++|...-. .+.+. ...
T Consensus 185 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~-------------------~l~~~-~~~ 244 (562)
T 3a79_B 185 GGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQ-------------------RLMTF-LSE 244 (562)
T ss_dssp SSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHH-------------------HHHHH-HHH
T ss_pred ccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccc-------------------hHHHH-HHH
Confidence 55565555443 1113345555555444444444444455555544421000 01111 123
Q ss_pred ccCcccccceecccccCCCCCCCChhhhhhhcccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCccccCCCccc
Q 039720 299 FNSLPNLSKLYLGRNNLGTRTSTDLDFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEI 378 (973)
Q Consensus 299 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~ 378 (973)
|..+++|+.|+|+++.+.... +.........++|++|++++|++.| .+|..+
T Consensus 245 l~~l~~L~~L~L~~~~l~~~~---~~~~~~~~~~~~L~~L~l~~n~l~~-------------------------~ip~~~ 296 (562)
T 3a79_B 245 LTRGPTLLNVTLQHIETTWKC---SVKLFQFFWPRPVEYLNIYNLTITE-------------------------RIDREE 296 (562)
T ss_dssp HHSCSSCEEEEEEEEEECHHH---HHHHHHHHTTSSEEEEEEEEEEECS-------------------------CCCCCC
T ss_pred HhccCcceEEEecCCcCcHHH---HHHHHHhhhcccccEEEEeccEeec-------------------------cccchh
Confidence 444445555555444432100 0000001112244444444444443 344433
Q ss_pred -----cCCCCcCEEEcccccCCCCCC-ccccCC---CCCCeEEccCcccCCCCCCccCCcCccceEEcCCCccccccccc
Q 039720 379 -----RNLFNLNGLGLEYNQLTGTIP-PAIGEL---RNLQYLGLVGNNIRGIIPDPIGNLTLLNVLQLGFNKLQGSIPSY 449 (973)
Q Consensus 379 -----~~l~~L~~L~Ls~N~l~~~~p-~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 449 (973)
..++.|+.++++.|.+ .+| .++..+ .+|++|++++|.+.... ....+++|++|++++|++++.+|..
T Consensus 297 ~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~ 372 (562)
T 3a79_B 297 FTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQG 372 (562)
T ss_dssp CCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTT
T ss_pred hhcccccchheehhhccccee--ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhh
Confidence 5666677777777776 344 333332 56888888888875332 1257788888888888888777888
Q ss_pred cccccccccccccCccccc--CCCccccccccccceeeccCCcccccCCc-ccccccccceeccccCcccccccccccCc
Q 039720 450 LGKCQNLMQLSAPNNKLNG--TLPPQIFGITTLSKLLDLSENHLSGSIPL-EVGNLKSLVQLDISRNNFSNEIPVTLSAC 526 (973)
Q Consensus 450 ~~~l~~L~~L~l~~N~l~~--~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~ls~N~l~~~~p~~~~~l 526 (973)
+..+++|+.|++++|++++ .+|..+..+..+ +.|++++|++++.+|. .+..+++|+.|++++|++++.+|..+.
T Consensus 373 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L-~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~-- 449 (562)
T 3a79_B 373 CSTLKRLQTLILQRNGLKNFFKVALMTKNMSSL-ETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP-- 449 (562)
T ss_dssp CCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTC-CEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--
T ss_pred hcccCCCCEEECCCCCcCCcccchhhhcCCCCC-CEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--
Confidence 8888888888888777773 112223333333 2455555555542332 244455555555555555444443332
Q ss_pred cchhhhcccCcccccccccchhhhccCCeecCCCCccccccCCC-CCCCCccceEeccCCcCcCcC
Q 039720 527 TTLEYLLMQGNSFNGSIPQSLNALKSIKELDLSCNNLSGQIPIH-LGNLPFLEYLNLSYNHFEGKV 591 (973)
Q Consensus 527 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~ls~N~l~~~~ 591 (973)
++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|+ .+|.. +..+++|+.|++++|++.+..
T Consensus 450 ~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c 513 (562)
T 3a79_B 450 PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTC 513 (562)
T ss_dssp TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCH
T ss_pred CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCc
Confidence 34555555555554 34444444555555555555554 33333 444555555555555544433
No 39
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.1e-45 Score=410.36 Aligned_cols=276 Identities=22% Similarity=0.287 Sum_probs=208.5
Q ss_pred hcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCceeEEeEeeec-ccCCCce
Q 039720 674 KEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK--KGATKSFVAECEALRNIRHRNLIKIITICSSI-DFKGADF 750 (973)
Q Consensus 674 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-~~~~~~~ 750 (973)
++|++.+.||+|+||+||+|+++.+|+.||||+++... ....+.+.+|+++|+.++|||||++++++... .+.+...
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 57999999999999999999999999999999996443 33456788999999999999999999987643 2455678
Q ss_pred EEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhcc
Q 039720 751 KAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLS 830 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~ 830 (973)
.|+|||||. |+|.+++...+.+++.++..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+.
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~ 209 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLC 209 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred EEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeeecc
Confidence 999999996 67999999888899999999999999999999999 99999999999999999999999999998664
Q ss_pred CCCCccCCCCCcccccccccccccCcccccCC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhc--Cc
Q 039720 831 HHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGG-DLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMAL--PK 907 (973)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~--~~ 907 (973)
... ..........+||+.|+|||++.+. .|+.++||||+||++|||++|++||.+....+ .+........ +.
T Consensus 210 ~~~----~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~-~l~~I~~~~g~p~~ 284 (398)
T 4b99_A 210 TSP----AEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH-QLQLIMMVLGTPSP 284 (398)
T ss_dssp ----------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHH-HHHHHHHHHCCCCG
T ss_pred cCc----cccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHH-HHHHHHHhcCCCCh
Confidence 321 1112234457899999999998875 56999999999999999999999997543211 1111111110 00
Q ss_pred ccccccCc--------ccccccCCC--chhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 908 KVMGIVDP--------SLLMEARGP--SKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 908 ~~~~~~~~--------~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
.....+.. .+....+.+ .........+.+++.+||+.||++|||++|++++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 285 AVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp GGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred HHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00000000 000000000 0011224566789999999999999999999874
No 40
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=4.7e-44 Score=393.80 Aligned_cols=293 Identities=25% Similarity=0.413 Sum_probs=275.3
Q ss_pred ccchhhHHHHHHHHhhccCCCcCCCCCCCCCCCCCc--eeeeEeeCCC--CeEEEEEeeccCccc--cccCCCcCCCCCC
Q 039720 16 HATSHVKHATVTFNMQQLHDPLGVTKSWNNSINLCQ--WTGVTCGHRH--QRVTKLDLESQNIGG--FLSPYIGNLSFLR 89 (973)
Q Consensus 16 ~~~~~~~~~ll~~~~~~~~d~~~~l~sw~~~~~~c~--w~gv~C~~~~--~~v~~l~l~~~~l~g--~~~~~l~~l~~L~ 89 (973)
.|.+.|++||++||++. .||. .+++|..+++||. |.||+|+..+ ++|+.|+|+++++.| .+|+.++++++|+
T Consensus 2 ~c~~~~~~aL~~~k~~~-~~~~-~l~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~ 79 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDL-GNPT-TLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLN 79 (313)
T ss_dssp CSCHHHHHHHHHHHHHT-TCCG-GGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCS
T ss_pred CCCHHHHHHHHHHHHhc-CCcc-cccCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCC
Confidence 46678999999999976 6876 7999998889998 9999998755 799999999999999 9999999999999
Q ss_pred EEEccC-CCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccceeeccCC
Q 039720 90 VINLAN-NSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLYGN 168 (973)
Q Consensus 90 ~L~L~~-n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n 168 (973)
+|+|++ |++++.+|..|+++++|++|+|++|.+++.+|..++++++|++|++++|.+.+.+|..+..+++|++|+|++|
T Consensus 80 ~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 159 (313)
T 1ogq_A 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred eeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCC
Confidence 999995 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCC-cccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccCCccccCCC
Q 039720 169 QLTGQLPPSIGNLS-ALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFKGSLP 247 (973)
Q Consensus 169 ~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip 247 (973)
++++.+|..+++++ +|++|++++|++++.+|..|..++ |++|++++|.+++..|..|..+++|+.|+|++|++++.+|
T Consensus 160 ~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 238 (313)
T 1ogq_A 160 RISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG 238 (313)
T ss_dssp CCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGG
T ss_pred cccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecC
Confidence 99999999999998 999999999999999999999998 9999999999999999999999999999999999997777
Q ss_pred cccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceeccccc
Q 039720 248 VCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNN 314 (973)
Q Consensus 248 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 314 (973)
. + ..+++|++|+|++|.|++.+|..|..+++|++|+|++|++++.+|.. ..+++|+.|++++|+
T Consensus 239 ~-~-~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 239 K-V-GLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp G-C-CCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred c-c-cccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 6 3 47899999999999999999999999999999999999999888876 889999999999997
No 41
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1e-43 Score=410.59 Aligned_cols=423 Identities=20% Similarity=0.260 Sum_probs=243.8
Q ss_pred ccCCCcCCCCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccc
Q 039720 78 LSPYIGNLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNW 157 (973)
Q Consensus 78 ~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l 157 (973)
|.|.-...++|++|++++|++ |.+|.+|+++++|++|++++|.++|.+|..++++.+|+.+++..|..
T Consensus 3 ~~p~~~~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~----------- 70 (454)
T 1jl5_A 3 INPRNVSNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD----------- 70 (454)
T ss_dssp --------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------
T ss_pred ccccccccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------
Confidence 344445678999999999999 79999999999999999999999999999999999988877776642
Q ss_pred cccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEc
Q 039720 158 LKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYL 237 (973)
Q Consensus 158 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 237 (973)
.++++|++++|.+++ +|.. .++|++|++++|++++ +|.. +++|++|++++|++++. |.. .++|++|++
T Consensus 71 ~~l~~L~l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L 138 (454)
T 1jl5_A 71 RQAHELELNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKAL-SDL---PPLLEYLGV 138 (454)
T ss_dssp HTCSEEECTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCC-CSC---CTTCCEEEC
T ss_pred cCCCEEEecCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcc-cCC---CCCCCEEEC
Confidence 578889999998884 5552 3678899999999886 6653 37888889998888753 221 167888888
Q ss_pred cCCccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceecccccCCC
Q 039720 238 FKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNLGT 317 (973)
Q Consensus 238 ~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 317 (973)
++|++++ +| . +.++++|++|++++|++++ +|..+ .+|++|++++|++++. | .|..+++|++|++++|+++.
T Consensus 139 ~~n~l~~-lp-~-~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~l-~-~~~~l~~L~~L~l~~N~l~~ 209 (454)
T 1jl5_A 139 SNNQLEK-LP-E-LQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEEL-P-ELQNLPFLTAIYADNNSLKK 209 (454)
T ss_dssp CSSCCSS-CC-C-CTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSSC-C-CCTTCTTCCEEECCSSCCSS
T ss_pred cCCCCCC-Cc-c-cCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCcC-c-cccCCCCCCEEECCCCcCCc
Confidence 8888884 77 3 3478888888888888885 45443 4788888888888874 4 57888888888888888765
Q ss_pred CCCCChhhhhhhcccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCccccCCCccccCCCCcCEEEcccccCCCC
Q 039720 318 RTSTDLDFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEIRNLFNLNGLGLEYNQLTGT 397 (973)
Q Consensus 318 ~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 397 (973)
++.. .++|++|++ ++|+++ .+| .++.+++|++|++++|++++
T Consensus 210 l~~~----------~~~L~~L~l-------------------------~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~- 251 (454)
T 1jl5_A 210 LPDL----------PLSLESIVA-------------------------GNNILE-ELP-ELQNLPFLTTIYADNNLLKT- 251 (454)
T ss_dssp CCCC----------CTTCCEEEC-------------------------CSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-
T ss_pred CCCC----------cCcccEEEC-------------------------cCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-
Confidence 4321 123444444 444444 444 36677778888888888774
Q ss_pred CCccccCCCCCCeEEccCcccCCCCCCccCCcCccceEEcCCCccccccccccccccccccccccCcccccCCCcccccc
Q 039720 398 IPPAIGELRNLQYLGLVGNNIRGIIPDPIGNLTLLNVLQLGFNKLQGSIPSYLGKCQNLMQLSAPNNKLNGTLPPQIFGI 477 (973)
Q Consensus 398 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~ 477 (973)
+|.. +++|++|++++|++++ +|.. +++|++|++++|++++ +|.. .++|+.|++++|++.+ ++. .
T Consensus 252 l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~-l~~~---~~~L~~L~l~~N~l~~-i~~----~ 315 (454)
T 1jl5_A 252 LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSG-LSEL---PPNLYYLNASSNEIRS-LCD----L 315 (454)
T ss_dssp CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSE-ESCC---CTTCCEEECCSSCCSE-ECC----C
T ss_pred cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCc-ccCc---CCcCCEEECcCCcCCc-ccC----C
Confidence 4442 3677888888888775 4443 3677788888887774 2221 1567777777777763 321 2
Q ss_pred ccccceeeccCCcccccCCcccccccccceeccccCcccccccccccCccchhhhcccCccccc--ccccchhhhccCCe
Q 039720 478 TTLSKLLDLSENHLSGSIPLEVGNLKSLVQLDISRNNFSNEIPVTLSACTTLEYLLMQGNSFNG--SIPQSLNALKSIKE 555 (973)
Q Consensus 478 ~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~ 555 (973)
...++.|++++|++++ +|.. +++|+.|++++|+++ .+|. .+++|++|++++|++++ .+|.++..+
T Consensus 316 ~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L----- 382 (454)
T 1jl5_A 316 PPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVEDL----- 382 (454)
T ss_dssp CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCEE-----
T ss_pred cCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHhh-----
Confidence 2233577777777775 5543 467777777777777 4555 35677777777777776 555554432
Q ss_pred ecCCCCccccccCCCCCCCCccceEeccCCcCcC--cCCCCCCCCCccccccccCccc
Q 039720 556 LDLSCNNLSGQIPIHLGNLPFLEYLNLSYNHFEG--KVPKKGVFSNETRISLTGNEQF 611 (973)
Q Consensus 556 L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~--~~p~~~~~~~~~~l~~~~N~~~ 611 (973)
+.|.+.|.+|.. +++|+.|++++|++++ .+|. .+..+.+.+|...
T Consensus 383 ---~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP~-----sl~~L~~~~~~~~ 429 (454)
T 1jl5_A 383 ---RMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIPE-----SVEDLRMNSERVV 429 (454)
T ss_dssp ---ECCC---------------------------------------------------
T ss_pred ---hhcccccccccc---cCcCCEEECCCCcCCccccchh-----hHhheeCcCcccC
Confidence 345556666653 4678888888888887 4443 3445556555433
No 42
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=9.2e-44 Score=415.39 Aligned_cols=251 Identities=22% Similarity=0.260 Sum_probs=201.2
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc---chhHHHHHHH---HHHHHhcCCCCceeEEeEeeecccC
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK---KGATKSFVAE---CEALRNIRHRNLIKIITICSSIDFK 746 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e---~~~l~~l~h~niv~~~~~~~~~~~~ 746 (973)
.++|++.+.||+|+||+||+|+++.+|+.||||+++... ........+| +.+++.++|||||++++++ +
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f-----~ 262 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAF-----H 262 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEE-----E
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEE-----E
Confidence 467999999999999999999999999999999997432 1222333444 5566677899999999985 4
Q ss_pred CCceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccc
Q 039720 747 GADFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 826 (973)
Q Consensus 747 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a 826 (973)
+.+..|+|||||+||+|.+++.+.+.+++..++.++.||+.||+|||++ +||||||||+|||++.+|++||+|||+|
T Consensus 263 ~~~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA 339 (689)
T 3v5w_A 263 TPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLA 339 (689)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred ECCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEeccccee
Confidence 4589999999999999999999988999999999999999999999999 9999999999999999999999999999
Q ss_pred hhccCCCCccCCCCCcccccccccccccCcccccC-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhc
Q 039720 827 RFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMG-GDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMAL 905 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~ 905 (973)
+..... .....+||+.|||||++.. ..|+.++||||+||++|||++|+.||........ ........
T Consensus 340 ~~~~~~----------~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~--~~i~~~i~ 407 (689)
T 3v5w_A 340 CDFSKK----------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMTL 407 (689)
T ss_dssp EECSSC----------CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH--HHHHHHHH
T ss_pred eecCCC----------CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHhhc
Confidence 865432 2335689999999999874 5899999999999999999999999976433321 11111110
Q ss_pred CcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCC-----HHHHHHH
Q 039720 906 PKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQ-----MTAVVKK 958 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 958 (973)
... ...+.....++.+++.+||+.||++|++ ++||+++
T Consensus 408 ~~~---------------~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 408 TMA---------------VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp HCC---------------CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred CCC---------------CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 000 0111223345678888999999999998 6887764
No 43
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=8.3e-44 Score=396.44 Aligned_cols=208 Identities=22% Similarity=0.292 Sum_probs=170.7
Q ss_pred HhhcCCcCCccccccceeEEEEEEC---CCCcEEEEEEeecccchhHHHHHHHHHHHHhc-CCCCceeEEeEeeecccCC
Q 039720 672 ATKEFSSSNRIGKGSFGFVYKGNLG---EDGMSVAVKVMNLDKKGATKSFVAECEALRNI-RHRNLIKIITICSSIDFKG 747 (973)
Q Consensus 672 ~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 747 (973)
..++|++.++||+|+||+||+|+++ .+++.||||++.... ...++.+|+++++.+ +||||+++++++..
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~----- 91 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRK----- 91 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEE-----
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEE-----
Confidence 4578999999999999999999874 467899999986443 356788999999988 69999999998654
Q ss_pred CceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCC-CcEEEeccccc
Q 039720 748 ADFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHD-MVAHVSDFGLA 826 (973)
Q Consensus 748 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~-~~~kl~Dfg~a 826 (973)
.++.++||||+++|+|.+++. .+++.+++.++.|++.||+|||++ ||+||||||+|||++.+ +.+||+|||+|
T Consensus 92 ~~~~~lvmE~~~g~~L~~~~~---~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla 165 (361)
T 4f9c_A 92 NDHVVIAMPYLEHESFLDILN---SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLA 165 (361)
T ss_dssp TTEEEEEEECCCCCCHHHHHT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred CCEEEEEEeCCCcccHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCC
Confidence 489999999999999999984 467888999999999999999999 99999999999999877 79999999999
Q ss_pred hhccCCCCccC--------------------CCCCcccccccccccccCcccccCC-CCCcccchHHHHHHHHHHHhCCC
Q 039720 827 RFLSHHPFLVA--------------------PEGQSSSIEMKGTIGYIGPEYGMGG-DLSMTGDVYSFGILLLEMFTRRR 885 (973)
Q Consensus 827 ~~~~~~~~~~~--------------------~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~ll~elltg~~ 885 (973)
+.......... ..........+||+.|+|||++.+. .|+.++||||+||++|||++|+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~ 245 (361)
T 4f9c_A 166 QGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRY 245 (361)
T ss_dssp EECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCS
T ss_pred cccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCC
Confidence 86543211000 0001122345799999999998876 58999999999999999999999
Q ss_pred CCCCCCC
Q 039720 886 PTDNMFN 892 (973)
Q Consensus 886 Pf~~~~~ 892 (973)
||.....
T Consensus 246 Pf~~~~~ 252 (361)
T 4f9c_A 246 PFYKASD 252 (361)
T ss_dssp SSSCCSS
T ss_pred CCCCCCC
Confidence 9965443
No 44
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=7e-43 Score=412.81 Aligned_cols=253 Identities=19% Similarity=0.287 Sum_probs=209.1
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceEE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFKA 752 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 752 (973)
.++|++.+.||+|+||+||+|+++.+|+.||+|++........+.+.+|+++|+.++|||||++++++. +....+
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~-----~~~~~~ 230 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE-----DDNEMV 230 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEE-----CSSEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEE-----ECCEEE
Confidence 368999999999999999999999999999999998766666778999999999999999999999854 458999
Q ss_pred EEEeeccCCCHHHHhhh-cCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCC--CcEEEeccccchhc
Q 039720 753 IVYEYMQYGSVDDWLHH-TNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHD--MVAHVSDFGLARFL 829 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~--~~~kl~Dfg~a~~~ 829 (973)
+|||||+||+|.+++.. .+.+.+.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.+
T Consensus 231 iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~ 307 (573)
T 3uto_A 231 MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL 307 (573)
T ss_dssp EEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEEC
T ss_pred EEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEc
Confidence 99999999999999864 45678889999999999999999999 99999999999999854 89999999999876
Q ss_pred cCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCccc
Q 039720 830 SHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKV 909 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
.. .......+||+.|+|||++.+..|+.++||||+||++|||++|+.||......+ .........
T Consensus 308 ~~---------~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~----~~~~i~~~~-- 372 (573)
T 3uto_A 308 DP---------KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE----TLRNVKSCD-- 372 (573)
T ss_dssp CT---------TSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH----HHHHHHTTC--
T ss_pred cC---------CCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH----HHHHHHhCC--
Confidence 53 223345679999999999999999999999999999999999999997543211 111111000
Q ss_pred ccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 910 MGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
..+. ...+......+.++|.+||+.||++|||++|++++
T Consensus 373 -----~~~~-----~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 373 -----WNMD-----DSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp -----CCCC-----SGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -----CCCC-----cccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0000 11112234556788999999999999999999874
No 45
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.5e-42 Score=414.66 Aligned_cols=437 Identities=19% Similarity=0.165 Sum_probs=309.5
Q ss_pred CeEEEEEeeccCccccccCCCcCCCCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEe
Q 039720 62 QRVTKLDLESQNIGGFLSPYIGNLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWV 141 (973)
Q Consensus 62 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l 141 (973)
.+++.|||+++.+.+..+..++.+++|++|+|++|++++..|..|+++++|++|+|++|.++ .+|.. .+++|++|++
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 46899999999999877789999999999999999999888999999999999999999999 78887 8999999999
Q ss_pred ccccccc-chhhhhccccccceeeccCCcccccCCCCCCCCCcc--cEEEccCCcC--CCCCCCcccCCC--ccceeccC
Q 039720 142 HTNNLVG-EIQAIIGNWLKIERLSLYGNQLTGQLPPSIGNLSAL--QTFDIAGNKL--DGRIPDSLGQLR--NLNYLGTS 214 (973)
Q Consensus 142 ~~n~~~~-~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L--~~L~L~~N~l--~~~~p~~~~~L~--~L~~L~Ls 214 (973)
++|++.+ .+|..|+++++|++|+|++|++++ ..+..+++| ++|++++|++ ++..|..|..+. .| .++++
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l-~l~l~ 204 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ---LDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVL-HLVFH 204 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT---TTTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEE-EEEEC
T ss_pred CCCCccccCchHhhcccCcccEEecCCCcccc---CchhhhhhceeeEEEeecccccccccCcccccccCcceE-EEEec
Confidence 9999987 457999999999999999999985 456666766 9999999999 888999888876 44 56889
Q ss_pred CCCccccCCc-cccCCCCCcEEEccCCc-----cccCCCcccccCCCCCcEEEccCCcccccC----CccccCCCCCCEE
Q 039720 215 ENDFSGMFPL-SVCNISSLDEAYLFKNR-----FKGSLPVCLGFNLPKLTVLVVAQNNLTGFL----PQSLSNASKLEWL 284 (973)
Q Consensus 215 ~N~l~~~~p~-~~~~l~~L~~L~L~~N~-----l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L 284 (973)
.|.+.+.++. .+..+++|+.++++.|+ +.+.++ .+ ..+++|+.|+++++.+++.. +..+ ..++|++|
T Consensus 205 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~-~l-~~l~~L~~L~L~~~~l~~~~~~~~~~~~-~~~~L~~L 281 (562)
T 3a79_B 205 PNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLS-EL-TRGPTLLNVTLQHIETTWKCSVKLFQFF-WPRPVEYL 281 (562)
T ss_dssp SSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHH-HH-HSCSSCEEEEEEEEEECHHHHHHHHHHH-TTSSEEEE
T ss_pred CccchhhhhhhcccccceEEEecccccccccchHHHHHH-HH-hccCcceEEEecCCcCcHHHHHHHHHhh-hcccccEE
Confidence 9999876655 57889999999999995 222222 22 36888888988888776421 2222 33589999
Q ss_pred EccCCcccccCcccc-----cCcccccceecccccCCCCCCCChhhhhhhcccccceeeccccccccCCCC-hhhhhhhh
Q 039720 285 ELNENHFSGQVRINF-----NSLPNLSKLYLGRNNLGTRTSTDLDFITLLTNCSKLVKLGLVFNRFGGALP-HSIANLST 358 (973)
Q Consensus 285 ~Ls~N~l~~~~~~~~-----~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~ 358 (973)
++++|++++.+|..+ ..+++|+.++++.|.+ . +| ..+..+.
T Consensus 282 ~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~-~-------------------------------~p~~~~~~~~- 328 (562)
T 3a79_B 282 NIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF-L-------------------------------FSKEALYSVF- 328 (562)
T ss_dssp EEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC-S-------------------------------SCHHHHHHHH-
T ss_pred EEeccEeeccccchhhhcccccchheehhhccccee-e-------------------------------cChhhhhhhh-
Confidence 999999987777766 5555555555555544 1 22 1111110
Q ss_pred hhhHhhhcCCccccCCCccccCCCCcCEEEcccccCCCCCCccccCCCCCCeEEccCcccCCCCCCccCCcCccceEEcC
Q 039720 359 TMTLIAMAGNQISGTIPPEIRNLFNLNGLGLEYNQLTGTIPPAIGELRNLQYLGLVGNNIRGIIPDPIGNLTLLNVLQLG 438 (973)
Q Consensus 359 ~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 438 (973)
...+|+.|++++|.+.... ....+++|++|++++|++++..|..+.++++|++|+++
T Consensus 329 ---------------------~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 385 (562)
T 3a79_B 329 ---------------------AEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQ 385 (562)
T ss_dssp ---------------------HTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECC
T ss_pred ---------------------ccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECC
Confidence 0124555555555543211 11445555555555555555555555555555555555
Q ss_pred CCcccc--ccccccccccccccccccCcccccCCCccccccccccceeeccCCcccccCCcccccccccceeccccCccc
Q 039720 439 FNKLQG--SIPSYLGKCQNLMQLSAPNNKLNGTLPPQIFGITTLSKLLDLSENHLSGSIPLEVGNLKSLVQLDISRNNFS 516 (973)
Q Consensus 439 ~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 516 (973)
+|++++ .+|..+..+++|+.|++++|++.+.+|...+.....++.|++++|++++.+|..+. ++|+.|+|++|+++
T Consensus 386 ~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~ 463 (562)
T 3a79_B 386 RNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM 463 (562)
T ss_dssp SSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC
T ss_pred CCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc
Confidence 555553 22344555566666666666665445554433333334666666666655555443 57788888888887
Q ss_pred ccccccccCccchhhhcccCcccccccccc-hhhhccCCeecCCCCccccccC
Q 039720 517 NEIPVTLSACTTLEYLLMQGNSFNGSIPQS-LNALKSIKELDLSCNNLSGQIP 568 (973)
Q Consensus 517 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p 568 (973)
.+|..+.++++|+.|+|++|+|+ .+|.. +..+++|+.|+|++|.+++..|
T Consensus 464 -~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 464 -SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp -CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred -ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 56666667888888888888887 45554 7788888888888888876443
No 46
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=6e-42 Score=398.99 Aligned_cols=355 Identities=18% Similarity=0.210 Sum_probs=200.1
Q ss_pred CCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCC-CcccccCCCccceEecccccccchhhhhccccccceee
Q 039720 86 SFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKI-PTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLS 164 (973)
Q Consensus 86 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~-p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~ 164 (973)
++|++|+|++|++++..|..|+++++|++|+|++|.+.+.+ |..|.++++|++|++++|.+.+..|..|+++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 56677777777776666666777777777777777666554 34566677777777777777666666777777777777
Q ss_pred ccCCcccccCCCC--CCCCCcccEEEccCCcCCCCCCCc-ccCCCccceeccCCCCccccCCccccCC--CCCcEEEccC
Q 039720 165 LYGNQLTGQLPPS--IGNLSALQTFDIAGNKLDGRIPDS-LGQLRNLNYLGTSENDFSGMFPLSVCNI--SSLDEAYLFK 239 (973)
Q Consensus 165 L~~n~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p~~-~~~L~~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~L~~ 239 (973)
|++|++++..|.. |+++++|++|+|++|++++..|.. +.++++|++|++++|++++..|..+..+ .+|+.|++++
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 7777766544333 666777777777777776655655 6667777777777777776666666555 5667777777
Q ss_pred CccccCCCccc-------ccCCCCCcEEEccCCcccccCCccccCC---CCCCEEEccCCcccccC----------cccc
Q 039720 240 NRFKGSLPVCL-------GFNLPKLTVLVVAQNNLTGFLPQSLSNA---SKLEWLELNENHFSGQV----------RINF 299 (973)
Q Consensus 240 N~l~~~ip~~~-------~~~l~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~----------~~~~ 299 (973)
|.+.+..+..+ ...+++|++|++++|.+++..|..+..+ ++|+.|++++|.+.+.. +..|
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~ 269 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTF 269 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTT
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCccccc
Confidence 77663222111 1145667777777777776666665544 67777777777554321 1112
Q ss_pred cCc--ccccceecccccCCCCCCCChhhhhhhcccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCccccCCCcc
Q 039720 300 NSL--PNLSKLYLGRNNLGTRTSTDLDFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPE 377 (973)
Q Consensus 300 ~~l--~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~ 377 (973)
..+ ++|++|++++|+++..... .+..+++|++| ++++|++++..|..
T Consensus 270 ~~~~~~~L~~L~l~~n~l~~~~~~------~~~~l~~L~~L-------------------------~Ls~n~l~~~~~~~ 318 (455)
T 3v47_A 270 KGLEASGVKTCDLSKSKIFALLKS------VFSHFTDLEQL-------------------------TLAQNEINKIDDNA 318 (455)
T ss_dssp GGGTTSCCCEEECCSSCCCEECTT------TTTTCTTCCEE-------------------------ECTTSCCCEECTTT
T ss_pred ccccccCceEEEecCccccccchh------hcccCCCCCEE-------------------------ECCCCcccccChhH
Confidence 221 3444444444444321111 11112222222 22222222333444
Q ss_pred ccCCCCcCEEEcccccCCCCCCccccCCCCCCeEEccCcccCCCCCCccCCcCccceEEcCCCccccccccccccccccc
Q 039720 378 IRNLFNLNGLGLEYNQLTGTIPPAIGELRNLQYLGLVGNNIRGIIPDPIGNLTLLNVLQLGFNKLQGSIPSYLGKCQNLM 457 (973)
Q Consensus 378 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 457 (973)
|..+++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|..+++|++|+|++|++++..+..+..+++|+
T Consensus 319 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 398 (455)
T 3v47_A 319 FWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQ 398 (455)
T ss_dssp TTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCC
T ss_pred hcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCccc
Confidence 44555555555555555544455555555555555555555554455555555555555555555544444445555555
Q ss_pred cccccCcccccCCC
Q 039720 458 QLSAPNNKLNGTLP 471 (973)
Q Consensus 458 ~L~l~~N~l~~~~p 471 (973)
.|++++|++++..|
T Consensus 399 ~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 399 KIWLHTNPWDCSCP 412 (455)
T ss_dssp EEECCSSCBCCCTT
T ss_pred EEEccCCCcccCCC
Confidence 55555555554443
No 47
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=9.9e-42 Score=394.02 Aligned_cols=399 Identities=22% Similarity=0.254 Sum_probs=276.4
Q ss_pred ccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccceeeccCCcccccCCCCCCCCCcccEE
Q 039720 108 RLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLYGNQLTGQLPPSIGNLSALQTF 187 (973)
Q Consensus 108 ~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 187 (973)
..++|++|++++|.+ |.+|.+++++++|++|++++|.+.+.+|..++++.+|+.+++.+|.. .+|++|
T Consensus 9 ~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~l~~L 76 (454)
T 1jl5_A 9 SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQAHEL 76 (454)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HTCSEE
T ss_pred ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cCCCEE
Confidence 468899999999999 78999999998888888888888888888888888888888877753 467999
Q ss_pred EccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccCCccccCCCcccccCCCCCcEEEccCCcc
Q 039720 188 DIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNL 267 (973)
Q Consensus 188 ~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l 267 (973)
++++|.+++ +|.. .++|++|++++|.+++ +|.. +++|++|++++|+++ .+|.. .++|++|++++|.+
T Consensus 77 ~l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~-~l~~~----~~~L~~L~L~~n~l 143 (454)
T 1jl5_A 77 ELNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLK-ALSDL----PPLLEYLGVSNNQL 143 (454)
T ss_dssp ECTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCS-CCCSC----CTTCCEEECCSSCC
T ss_pred EecCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccC-cccCC----CCCCCEEECcCCCC
Confidence 999999985 5552 4789999999999997 5643 488999999999998 45532 26899999999999
Q ss_pred cccCCccccCCCCCCEEEccCCcccccCcccccCcccccceecccccCCCCCCCChhhhhhhcccccceeeccccccccC
Q 039720 268 TGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNLGTRTSTDLDFITLLTNCSKLVKLGLVFNRFGG 347 (973)
Q Consensus 268 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~ 347 (973)
++ +| .|+++++|++|++++|++++. |.. .++|++|++++|+++.++ .+.++++|+.|++++|++.+
T Consensus 144 ~~-lp-~~~~l~~L~~L~l~~N~l~~l-p~~---~~~L~~L~L~~n~l~~l~--------~~~~l~~L~~L~l~~N~l~~ 209 (454)
T 1jl5_A 144 EK-LP-ELQNSSFLKIIDVDNNSLKKL-PDL---PPSLEFIAAGNNQLEELP--------ELQNLPFLTAIYADNNSLKK 209 (454)
T ss_dssp SS-CC-CCTTCTTCCEEECCSSCCSCC-CCC---CTTCCEEECCSSCCSSCC--------CCTTCTTCCEEECCSSCCSS
T ss_pred CC-Cc-ccCCCCCCCEEECCCCcCccc-CCC---cccccEEECcCCcCCcCc--------cccCCCCCCEEECCCCcCCc
Confidence 96 67 599999999999999999874 433 358999999999988753 24677788888887776653
Q ss_pred CCChhhhhhhhhhhHhhhcCCccccCCCccccCCCCcCEEEcccccCCCCCCccccCCCCCCeEEccCcccCCCCCCccC
Q 039720 348 ALPHSIANLSTTMTLIAMAGNQISGTIPPEIRNLFNLNGLGLEYNQLTGTIPPAIGELRNLQYLGLVGNNIRGIIPDPIG 427 (973)
Q Consensus 348 ~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 427 (973)
+ |.. .++|++|++++|+++ .+|. ++.+++|++|++++|++++ +|..
T Consensus 210 -l-------------------------~~~---~~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~~-- 255 (454)
T 1jl5_A 210 -L-------------------------PDL---PLSLESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKT-LPDL-- 255 (454)
T ss_dssp -C-------------------------CCC---CTTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSS-CCSC--
T ss_pred -C-------------------------CCC---cCcccEEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCc-cccc--
Confidence 2 221 148999999999999 6674 8999999999999999985 4543
Q ss_pred CcCccceEEcCCCccccccccccccccccccccccCcccccCCCccccccccccceeeccCCcccccCCcccccc-cccc
Q 039720 428 NLTLLNVLQLGFNKLQGSIPSYLGKCQNLMQLSAPNNKLNGTLPPQIFGITTLSKLLDLSENHLSGSIPLEVGNL-KSLV 506 (973)
Q Consensus 428 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l-~~L~ 506 (973)
+++|++|++++|++++ +|.. +++|+.|++++|++++ +|.. ...++.|++++|++++ ++ .+ ++|+
T Consensus 256 -~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~-l~~~----~~~L~~L~l~~N~l~~-i~----~~~~~L~ 320 (454)
T 1jl5_A 256 -PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSG-LSEL----PPNLYYLNASSNEIRS-LC----DLPPSLE 320 (454)
T ss_dssp -CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSE-ESCC----CTTCCEEECCSSCCSE-EC----CCCTTCC
T ss_pred -ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCc-ccCc----CCcCCEEECcCCcCCc-cc----CCcCcCC
Confidence 4789999999999995 6654 3789999999999985 3321 1234589999999985 22 23 5899
Q ss_pred eeccccCcccccccccccCccchhhhcccCcccccccccchhhhccCCeecCCCCcccc--ccCCCCCCCCccceEeccC
Q 039720 507 QLDISRNNFSNEIPVTLSACTTLEYLLMQGNSFNGSIPQSLNALKSIKELDLSCNNLSG--QIPIHLGNLPFLEYLNLSY 584 (973)
Q Consensus 507 ~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~ls~ 584 (973)
.|++++|++++ +|.. +++|++|++++|+++ .+|. .+++|++|+|++|++++ .+|.++.. ++.
T Consensus 321 ~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~ 384 (454)
T 1jl5_A 321 ELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRM 384 (454)
T ss_dssp EEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EEC
T ss_pred EEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhh
Confidence 99999999996 6654 578999999999998 5666 47899999999999997 67766543 356
Q ss_pred CcCcCcCCCCCCCCCccccccccCcccc
Q 039720 585 NHFEGKVPKKGVFSNETRISLTGNEQFC 612 (973)
Q Consensus 585 N~l~~~~p~~~~~~~~~~l~~~~N~~~c 612 (973)
|.+.|.+|.. +++++.+++.+|+...
T Consensus 385 n~~~~~i~~~--~~~L~~L~ls~N~l~~ 410 (454)
T 1jl5_A 385 NSHLAEVPEL--PQNLKQLHVETNPLRE 410 (454)
T ss_dssp CC--------------------------
T ss_pred cccccccccc--cCcCCEEECCCCcCCc
Confidence 8888888874 6889999999998654
No 48
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=5.1e-41 Score=391.10 Aligned_cols=381 Identities=19% Similarity=0.175 Sum_probs=214.3
Q ss_pred ceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccC-CccccCCCCCcEEEccC
Q 039720 161 ERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMF-PLSVCNISSLDEAYLFK 239 (973)
Q Consensus 161 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~ 239 (973)
+.++.+++.++ .+|. +. ++|++|+|++|++++..|..|+++++|++|+|++|.+.+.+ +..|.++++|++|+|++
T Consensus 13 ~~~~c~~~~l~-~lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~ 88 (455)
T 3v47_A 13 YNAICINRGLH-QVPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDY 88 (455)
T ss_dssp TEEECCSSCCS-SCCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTT
T ss_pred cccCcCCCCcc-cCCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCC
Confidence 45666666666 4555 22 56677777777776656666666777777777666665333 34455555555555555
Q ss_pred CccccCCCcccccCCCCCcEEEccCCcccccCCcc--ccCCCCCCEEEccCCcccccCccc-ccCcccccceecccccCC
Q 039720 240 NRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQS--LSNASKLEWLELNENHFSGQVRIN-FNSLPNLSKLYLGRNNLG 316 (973)
Q Consensus 240 N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~~~~-~~~l~~L~~L~L~~N~l~ 316 (973)
|++++..|..+. ++++|++|+|++|.+++..|.. |.++++|++|+|++|++++..|.. |..+++|++|+|++|+++
T Consensus 89 n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~ 167 (455)
T 3v47_A 89 NQFLQLETGAFN-GLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVK 167 (455)
T ss_dssp CTTCEECTTTTT-TCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBS
T ss_pred CccCccChhhcc-CcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCccc
Confidence 555433333332 4444444444444444432222 444444444444444444443332 344444444444444332
Q ss_pred CCCCCChhhhhhhcccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCccccCCCccccCC--CCcCEEEcccccC
Q 039720 317 TRTSTDLDFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEIRNL--FNLNGLGLEYNQL 394 (973)
Q Consensus 317 ~~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l--~~L~~L~Ls~N~l 394 (973)
. . .+..+..+ .+|+.|++++|.+
T Consensus 168 ~------------------------------~-------------------------~~~~l~~l~~~~L~~L~l~~n~l 192 (455)
T 3v47_A 168 S------------------------------I-------------------------CEEDLLNFQGKHFTLLRLSSITL 192 (455)
T ss_dssp C------------------------------C-------------------------CTTTSGGGTTCEEEEEECTTCBC
T ss_pred c------------------------------c-------------------------ChhhhhccccccccccccccCcc
Confidence 2 1 12222222 4566677777776
Q ss_pred CCCCCccc--------cCCCCCCeEEccCcccCCCCCCccCCc---CccceEEcCCCccccccccccccccccccccccC
Q 039720 395 TGTIPPAI--------GELRNLQYLGLVGNNIRGIIPDPIGNL---TLLNVLQLGFNKLQGSIPSYLGKCQNLMQLSAPN 463 (973)
Q Consensus 395 ~~~~p~~~--------~~l~~L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 463 (973)
.+..+.++ ..+++|++|++++|++.+..|..+..+ ++|+.|++++|.+.+.... .
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~--------------~ 258 (455)
T 3v47_A 193 QDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFG--------------H 258 (455)
T ss_dssp TTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTT--------------C
T ss_pred cccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccc--------------h
Confidence 65444432 244566666666666665555554433 5666666666654432110 0
Q ss_pred cccccCCCcccccc-ccccceeeccCCcccccCCcccccccccceeccccCcccccccccccCccchhhhcccCcccccc
Q 039720 464 NKLNGTLPPQIFGI-TTLSKLLDLSENHLSGSIPLEVGNLKSLVQLDISRNNFSNEIPVTLSACTTLEYLLMQGNSFNGS 542 (973)
Q Consensus 464 N~l~~~~p~~~~~~-~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 542 (973)
+.+.+..+..+.+. ...++.|++++|.+++..|..++.+++|+.|+|++|++++..|..|.++++|++|+|++|++++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 338 (455)
T 3v47_A 259 TNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSI 338 (455)
T ss_dssp CSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEE
T ss_pred hhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCc
Confidence 01110111111111 01234677777777776677777777777777777777766666777777777777777777766
Q ss_pred cccchhhhccCCeecCCCCccccccCCCCCCCCccceEeccCCcCcCcCCCC-CCCCCccccccccCccccCCC
Q 039720 543 IPQSLNALKSIKELDLSCNNLSGQIPIHLGNLPFLEYLNLSYNHFEGKVPKK-GVFSNETRISLTGNEQFCGGL 615 (973)
Q Consensus 543 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~l~~~~N~~~cg~~ 615 (973)
.|..+..+++|++|+|++|++++..|..+..+++|++|+|++|++++.++.. ..+++++.+++.+||+.|+++
T Consensus 339 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 339 DSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred ChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 6667777777777777777777666777777777777777777777655543 456667777777777777665
No 49
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=9.2e-41 Score=365.10 Aligned_cols=252 Identities=23% Similarity=0.298 Sum_probs=209.0
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceEE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFKA 752 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 752 (973)
.++|++.+.||+|+||+||+|++..+++.||||++........+.+.+|+.+++.++||||+++++++.. .+..+
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~~~ 93 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-----GDELW 93 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----TTEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEE-----CCEEE
Confidence 4689999999999999999999999999999999987766667789999999999999999999998765 37899
Q ss_pred EEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhccCC
Q 039720 753 IVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLSHH 832 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~~~ 832 (973)
+||||+++|+|.+++... ...+..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 94 lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (297)
T 3fxz_A 94 VVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169 (297)
T ss_dssp EEEECCTTCBHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EEEECCCCCCHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCc
Confidence 999999999999999765 567788999999999999999999 9999999999999999999999999999865432
Q ss_pred CCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCcccccc
Q 039720 833 PFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKVMGI 912 (973)
Q Consensus 833 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
........||+.|+|||++.+..++.++||||+||++|||++|+.||........ .........
T Consensus 170 --------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~------- 233 (297)
T 3fxz_A 170 --------QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LYLIATNGT------- 233 (297)
T ss_dssp --------TCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHHCS-------
T ss_pred --------ccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhCCC-------
Confidence 1223345799999999999999999999999999999999999999975422111 101000000
Q ss_pred cCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 913 VDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
.....+......+.+++.+||+.||++|||++|+++.
T Consensus 234 ---------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 234 ---------PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp ---------CCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ---------CCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0011123344567789999999999999999999874
No 50
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=366.37 Aligned_cols=272 Identities=22% Similarity=0.330 Sum_probs=216.5
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceEE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFKA 752 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 752 (973)
.++|++.+.||+|+||+||+|++..+++.||+|++........+.+.+|+++++.++||||+++++++.. ....+
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~~~ 83 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYK-----DKRLN 83 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-----TTEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEec-----CCeeE
Confidence 3689999999999999999999999999999999876666667889999999999999999999999765 37899
Q ss_pred EEEeeccCCCHHHHhhh-cCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhccC
Q 039720 753 IVYEYMQYGSVDDWLHH-TNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLSH 831 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~~ 831 (973)
+||||+++|+|.+++.. ....++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 160 (310)
T 3s95_A 84 FITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVD 160 (310)
T ss_dssp EEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC-
T ss_pred EEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccc
Confidence 99999999999999987 45667788999999999999999999 999999999999999999999999999987644
Q ss_pred CCCccCC------CCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhc
Q 039720 832 HPFLVAP------EGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMAL 905 (973)
Q Consensus 832 ~~~~~~~------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~ 905 (973)
....... ..........||+.|+|||++.+..++.++|||||||++|||++|..||..................
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
T 3s95_A 161 EKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFL 240 (310)
T ss_dssp -------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHH
T ss_pred ccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccc
Confidence 3211000 0011112457999999999999999999999999999999999999998765433221111000000
Q ss_pred CcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccccccCC
Q 039720 906 PKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEIFIGP 969 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 969 (973)
+.. .+..++..+.+++.+||+.||++|||++|+++.|+++...+.++
T Consensus 241 --------~~~---------~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~~~ 287 (310)
T 3s95_A 241 --------DRY---------CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAGH 287 (310)
T ss_dssp --------HHT---------CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHHC
T ss_pred --------ccc---------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhccCc
Confidence 000 01223345778999999999999999999999999997665543
No 51
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.1e-40 Score=370.29 Aligned_cols=286 Identities=35% Similarity=0.570 Sum_probs=228.7
Q ss_pred cCCCcccHHHHHHHhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccc-hhHHHHHHHHHHHHhcCCCCceeEE
Q 039720 659 QQFPIVSYAELSKATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKK-GATKSFVAECEALRNIRHRNLIKII 737 (973)
Q Consensus 659 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~ 737 (973)
.....++..++....++|++.+.||+|+||+||+|++. +++.||||++..... .....+.+|+++++.++||||++++
T Consensus 15 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~ 93 (326)
T 3uim_A 15 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLR 93 (326)
T ss_dssp CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCC
T ss_pred CccceecHHHHHHHhhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceE
Confidence 34556788999999999999999999999999999864 799999999975432 2234688999999999999999999
Q ss_pred eEeeecccCCCceEEEEEeeccCCCHHHHhhhcCC----CchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEec
Q 039720 738 TICSSIDFKGADFKAIVYEYMQYGSVDDWLHHTND----KLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLD 813 (973)
Q Consensus 738 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~----~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~ 813 (973)
+++.. ....++||||+.+|+|.+++..... ..+..+..++.|++.||+|||+.+.++|+||||||+||+++
T Consensus 94 ~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~ 168 (326)
T 3uim_A 94 GFCMT-----PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD 168 (326)
T ss_dssp EEECC-----SSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEEC
T ss_pred EEEec-----CCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEEC
Confidence 98654 4678999999999999999976442 56678899999999999999998777899999999999999
Q ss_pred CCCcEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCC---
Q 039720 814 HDMVAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNM--- 890 (973)
Q Consensus 814 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~--- 890 (973)
.++.+||+|||+++...... ........||+.|+|||++.+..++.++|||||||++|+|++|+.||...
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 241 (326)
T 3uim_A 169 EEFEAVVGDFGLAKLMDYKD-------THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLA 241 (326)
T ss_dssp TTCCEEECCCSSCEECCSSS-------SCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHT
T ss_pred CCCCEEeccCccccccCccc-------ccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccc
Confidence 99999999999998664321 22333456999999999998889999999999999999999999999632
Q ss_pred CCCCccHhhhhhHhcCcc-cccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhc
Q 039720 891 FNDGLTLHGYAKMALPKK-VMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAV 962 (973)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 962 (973)
.........+........ .....+.... .....++...+.+++.+||+.||++|||++||+++|++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 242 NDDDVMLLDWVKGLLKEKKLEALVDVDLQ-----GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp TTSCSBHHHHHTTTTSSCCSTTSSCTTCT-----TSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred cccchhHHHHHHHHhhchhhhhhcChhhc-----cccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 122223333433332222 2223332222 334467788999999999999999999999999999875
No 52
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=8.9e-41 Score=367.14 Aligned_cols=264 Identities=27% Similarity=0.396 Sum_probs=201.8
Q ss_pred HhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCc
Q 039720 672 ATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK--KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGAD 749 (973)
Q Consensus 672 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 749 (973)
..++|++.+.||+|+||+||+|++ +|+.||||++.... ....+.+.+|++++++++||||+++++++.. ..
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~ 107 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ-----PP 107 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-----TT
T ss_pred ChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-----CC
Confidence 456899999999999999999988 78999999997543 2344678999999999999999999998643 46
Q ss_pred eEEEEEeeccCCCHHHHhhhcCC---CchhhHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCcEEecCCCcEEEeccc
Q 039720 750 FKAIVYEYMQYGSVDDWLHHTND---KLEVGKLNIVIEVASVIEYLHNHCQPP--IVHGDLKPSNVLLDHDMVAHVSDFG 824 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~~---~~~~~~~~i~~qi~~aL~~LH~~~~~~--ivHrDik~~NILl~~~~~~kl~Dfg 824 (973)
..++||||+++|+|.+++..... ..+..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+|||
T Consensus 108 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg 184 (309)
T 3p86_A 108 NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFG 184 (309)
T ss_dssp CCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC
T ss_pred ceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCC
Confidence 78999999999999999987553 66788899999999999999999 8 9999999999999999999999999
Q ss_pred cchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHh
Q 039720 825 LARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMA 904 (973)
Q Consensus 825 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~ 904 (973)
+++..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||....... ........
T Consensus 185 ~a~~~~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~--~~~~~~~~ 254 (309)
T 3p86_A 185 LSRLKAST--------FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ--VVAAVGFK 254 (309)
T ss_dssp -------------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH--HHHHHHHS
T ss_pred CCcccccc--------ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhc
Confidence 99754321 122334579999999999999999999999999999999999999997543221 11111000
Q ss_pred cCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccccccCCCC
Q 039720 905 LPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEIFIGPPI 971 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~ 971 (973)
. .....+..++..+.+++.+||+.||++|||++|+++.|+++.+....||.
T Consensus 255 --~--------------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~~~ 305 (309)
T 3p86_A 255 --C--------------KRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPPN 305 (309)
T ss_dssp --C--------------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-------
T ss_pred --C--------------CCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCCCCC
Confidence 0 00111223345678899999999999999999999999999887777764
No 53
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=2.2e-40 Score=366.76 Aligned_cols=278 Identities=33% Similarity=0.505 Sum_probs=224.1
Q ss_pred HHHHHhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCC
Q 039720 668 ELSKATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKG 747 (973)
Q Consensus 668 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 747 (973)
++...+++|++.+.||+|+||+||+|++. +++.||||++........+.+.+|+.+++.++||||+++++++..
T Consensus 33 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----- 106 (321)
T 2qkw_B 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE----- 106 (321)
T ss_dssp CCCCCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCC-----
T ss_pred HHHHHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC-----
Confidence 34456789999999999999999999974 799999999987666667889999999999999999999998643
Q ss_pred CceEEEEEeeccCCCHHHHhhhcC----CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEecc
Q 039720 748 ADFKAIVYEYMQYGSVDDWLHHTN----DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 823 (973)
Q Consensus 748 ~~~~~lv~e~~~~gsL~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Df 823 (973)
....++||||+++|+|.+++.... ...+..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 107 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Df 183 (321)
T 2qkw_B 107 RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDF 183 (321)
T ss_dssp TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCC
T ss_pred CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeec
Confidence 478899999999999999997643 356678899999999999999999 9999999999999999999999999
Q ss_pred ccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCC-ccHhhhhh
Q 039720 824 GLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDG-LTLHGYAK 902 (973)
Q Consensus 824 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~-~~~~~~~~ 902 (973)
|+++...... .........||+.|+|||++.+..++.++|||||||++|||++|+.||....... .....+..
T Consensus 184 g~~~~~~~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~ 257 (321)
T 2qkw_B 184 GISKKGTELD------QTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257 (321)
T ss_dssp TTCEECSSSS------CCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTH
T ss_pred cccccccccc------ccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhh
Confidence 9998653321 1222334568999999999988899999999999999999999999997654432 22333322
Q ss_pred Hhc-CcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhcccc
Q 039720 903 MAL-PKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEI 965 (973)
Q Consensus 903 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 965 (973)
... .......+++... .....+++..+.+++.+||+.||++|||++|+++.|+.+...
T Consensus 258 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 258 ESHNNGQLEQIVDPNLA-----DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp HHHTTTCCCSSSSSSCT-----TCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred hccccccHHHhcChhhc-----cccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 211 1222333333322 223467788899999999999999999999999999987543
No 54
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.5e-40 Score=367.88 Aligned_cols=249 Identities=23% Similarity=0.315 Sum_probs=206.8
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCce
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK--KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADF 750 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 750 (973)
.++|++.+.||+|+||+||+|++..+|+.||||++.... ....+.+.+|+++++.++||||+++++++.. ...
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-----~~~ 88 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIET-----EKT 88 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SSE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-----CCE
Confidence 468999999999999999999999999999999997543 3345678899999999999999999998654 478
Q ss_pred EEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhcc
Q 039720 751 KAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLS 830 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~ 830 (973)
.++||||+++|+|.+++...+...+..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 89 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 165 (328)
T 3fe3_A 89 LYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFT 165 (328)
T ss_dssp EEEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred EEEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence 999999999999999998888888999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCccCCCCCcccccccccccccCcccccCCCCC-cccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCccc
Q 039720 831 HHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLS-MTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKV 909 (973)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
.. .......||+.|+|||++.+..+. .++||||+||++|+|++|+.||...... ........
T Consensus 166 ~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----~~~~~i~~--- 228 (328)
T 3fe3_A 166 VG---------GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK-----ELRERVLR--- 228 (328)
T ss_dssp SS---------CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHHHHH---
T ss_pred CC---------CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH-----HHHHHHHh---
Confidence 32 233456799999999999988874 8999999999999999999999754221 11111000
Q ss_pred ccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 910 MGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
.....+ ......+.+++.+||+.||++|||++|+++.
T Consensus 229 ---------~~~~~p---~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 229 ---------GKYRIP---FYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp ---------CCCCCC---TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred ---------CCCCCC---CCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 000011 1223456788899999999999999999875
No 55
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=3.9e-40 Score=365.42 Aligned_cols=250 Identities=24% Similarity=0.286 Sum_probs=206.8
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecc---cchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCc
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLD---KKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGAD 749 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 749 (973)
.++|++.+.||+|+||+||+|+++.+|+.||+|+++.. .......+.+|+.+++.++||||+++++++.. .+
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~-----~~ 78 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT-----HD 78 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEEC-----SS
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEe-----CC
Confidence 36899999999999999999999999999999999754 23345678899999999999999999998654 47
Q ss_pred eEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhc
Q 039720 750 FKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 829 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~ 829 (973)
..++||||+++|+|.+++...+.+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 79 ~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 155 (337)
T 1o6l_A 79 RLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG 155 (337)
T ss_dssp EEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhc
Confidence 8999999999999999999888888899999999999999999999 9999999999999999999999999999854
Q ss_pred cCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCccc
Q 039720 830 SHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKV 909 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
... .......+||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+.. .... ..
T Consensus 156 ~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~--~i~~-~~- 221 (337)
T 1o6l_A 156 ISD--------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--RLFE--LILM-EE- 221 (337)
T ss_dssp CCT--------TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHH--HHHH-CC-
T ss_pred ccC--------CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH--HHHH--HHHc-CC-
Confidence 321 22334567999999999999999999999999999999999999999753221 1111 1100 00
Q ss_pred ccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHHH
Q 039720 910 MGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERM-----QMTAVVKK 958 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 958 (973)
...+......+.+++.+||+.||++|| +++|++++
T Consensus 222 --------------~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 222 --------------IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp --------------CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred --------------CCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 001112334567888999999999999 89998875
No 56
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=369.74 Aligned_cols=254 Identities=24% Similarity=0.306 Sum_probs=199.7
Q ss_pred HhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccc-hhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCce
Q 039720 672 ATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKK-GATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADF 750 (973)
Q Consensus 672 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 750 (973)
..++|++.+.||+|+||+||+|++..+|+.||||++..... .....+.+|+++++.++||||+++++++.. ...
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~-----~~~ 82 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLET-----ANK 82 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEEC-----SSE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEe-----CCE
Confidence 35789999999999999999999999999999999975432 234568899999999999999999998654 478
Q ss_pred EEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhcc
Q 039720 751 KAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLS 830 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~ 830 (973)
.++||||+++|+|.+++...+.+++..++.++.||+.|++|||+. +|+||||||+||+++.++.+||+|||+|....
T Consensus 83 ~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 159 (347)
T 3zgw_A 83 IFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPK 159 (347)
T ss_dssp EEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC--
T ss_pred EEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCccccc
Confidence 999999999999999998888888999999999999999999999 99999999999999999999999999987543
Q ss_pred CCCCccCCCCCcccccccccccccCcccccCCCC-CcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCccc
Q 039720 831 HHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDL-SMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKV 909 (973)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
... ........||+.|+|||++.+..+ +.++||||+||++|+|++|+.||...... .. .......
T Consensus 160 ~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~--~~--~~~i~~~--- 225 (347)
T 3zgw_A 160 GNK-------DYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM--AL--YKKIMRG--- 225 (347)
T ss_dssp -------------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHH--HH--HHHHHHT---
T ss_pred CCC-------CccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH--HH--HHHHHcC---
Confidence 321 222345579999999999988876 89999999999999999999999753211 11 1111000
Q ss_pred ccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 039720 910 MGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLC 960 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 960 (973)
.. ..+......+.+++.+||+.||++|||++|+++.-.
T Consensus 226 ----------~~---~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~hp~ 263 (347)
T 3zgw_A 226 ----------KY---DVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPW 263 (347)
T ss_dssp ----------CC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTCHH
T ss_pred ----------CC---CCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcCcc
Confidence 00 001112345668899999999999999999997543
No 57
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2.3e-40 Score=366.46 Aligned_cols=282 Identities=22% Similarity=0.279 Sum_probs=210.8
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceEE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFKA 752 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 752 (973)
.++|++.+.||+|+||+||+|++ .++.||||+++.... .......|+.++++++||||+++++++... .......+
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-~~~~~~~~ 98 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQL--LNEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRG-TSVDVDLW 98 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEE--TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEE-CSSSEEEE
T ss_pred hhhchhhheecccCceEEEEEEE--CCCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccC-CCCCceEE
Confidence 46899999999999999999998 489999999975432 344566689999999999999999998763 22235689
Q ss_pred EEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcC-------CCCeEecCCCCCcEEecCCCcEEEecccc
Q 039720 753 IVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHC-------QPPIVHGDLKPSNVLLDHDMVAHVSDFGL 825 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-------~~~ivHrDik~~NILl~~~~~~kl~Dfg~ 825 (973)
+||||+++|+|.+++... ..++..++.++.|++.||+|||+.+ .++|+||||||+||+++.++.+||+|||+
T Consensus 99 lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~ 177 (322)
T 3soc_A 99 LITAFHEKGSLSDFLKAN-VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL 177 (322)
T ss_dssp EEEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred EEEecCCCCCHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCc
Confidence 999999999999999764 4778889999999999999999751 23899999999999999999999999999
Q ss_pred chhccCCCCccCCCCCcccccccccccccCcccccCC-----CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhh
Q 039720 826 ARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGG-----DLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGY 900 (973)
Q Consensus 826 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~ 900 (973)
++...... .........||+.|+|||++.+. .++.++|||||||++|||++|+.||.............
T Consensus 178 a~~~~~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~ 251 (322)
T 3soc_A 178 ALKFEAGK------SAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEE 251 (322)
T ss_dssp CEEECTTS------CCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHH
T ss_pred cccccccc------CccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhh
Confidence 98765432 11222335799999999998873 55678899999999999999999998654432211110
Q ss_pred hhHhcC--ccccc-ccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhcccc
Q 039720 901 AKMALP--KKVMG-IVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEI 965 (973)
Q Consensus 901 ~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 965 (973)
.....+ ..... ..................++..+.+++.+||+.||++|||++||++.|+++.+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 252 EIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp HHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 000000 00000 001111111110112235567789999999999999999999999999988653
No 58
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.7e-40 Score=359.82 Aligned_cols=262 Identities=21% Similarity=0.360 Sum_probs=208.3
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCc
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK---KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGAD 749 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 749 (973)
.++|++.+.||+|+||+||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++.. ..
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-----~~ 84 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEE-----DD 84 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEEC-----SS
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeee-----CC
Confidence 368999999999999999999999999999999986443 2345678999999999999999999998643 47
Q ss_pred eEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhc
Q 039720 750 FKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 829 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~ 829 (973)
..++||||+++++|.+++...+..++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 85 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 161 (294)
T 4eqm_A 85 CYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKAL 161 (294)
T ss_dssp EEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC
T ss_pred eEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCcccc
Confidence 8999999999999999999888888899999999999999999999 9999999999999999999999999999865
Q ss_pred cCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCccc
Q 039720 830 SHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKV 909 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
.... ........||+.|+|||++.+..++.++||||+|+++|+|++|+.||........ ..... ...
T Consensus 162 ~~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~----~~~~~-~~~- 228 (294)
T 4eqm_A 162 SETS-------LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI----AIKHI-QDS- 228 (294)
T ss_dssp --------------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHH----HHHHH-SSC-
T ss_pred cccc-------ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH----HHHHh-hcc-
Confidence 4321 1222345699999999999999999999999999999999999999975432111 11100 000
Q ss_pred ccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCC-CHHHHHHHHHhccc
Q 039720 910 MGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERM-QMTAVVKKLCAVGE 964 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~~~ 964 (973)
. +.... ......+..+.+++.+|++.||++|| +++++.+.|+++..
T Consensus 229 ---~-~~~~~-----~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~ 275 (294)
T 4eqm_A 229 ---V-PNVTT-----DVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH 275 (294)
T ss_dssp ---C-CCHHH-----HSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred ---C-CCcch-----hcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence 0 00000 00122345678899999999999999 99999999998743
No 59
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=5.9e-41 Score=366.70 Aligned_cols=281 Identities=22% Similarity=0.346 Sum_probs=210.6
Q ss_pred hhcCCcCCccccccceeEEEEE----ECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCC
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGN----LGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGA 748 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 748 (973)
.++|++.+.||+|+||+||+|+ +..+++.||||++........+.+.+|+++++.++||||+++++++... +.
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~ 85 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA---GR 85 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHH---HH
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---CC
Confidence 4689999999999999999998 5668999999999876666667899999999999999999999987542 23
Q ss_pred ceEEEEEeeccCCCHHHHhhhcC-CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccch
Q 039720 749 DFKAIVYEYMQYGSVDDWLHHTN-DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 827 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~ 827 (973)
...++||||+++|+|.+++.... ..++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~ 162 (295)
T 3ugc_A 86 RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTK 162 (295)
T ss_dssp TSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC
T ss_pred CceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcccc
Confidence 45889999999999999997654 367788899999999999999999 99999999999999999999999999998
Q ss_pred hccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcC-
Q 039720 828 FLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALP- 906 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~- 906 (973)
....... .........++..|+|||++.+..++.++||||||+++|||++|..||.....+.. ........
T Consensus 163 ~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~---~~~~~~~~~ 234 (295)
T 3ugc_A 163 VLPQDKE-----FFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM---RMIGNDKQG 234 (295)
T ss_dssp ------------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHH---HHHCTTCCT
T ss_pred cccCCcc-----eeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHH---hhhcCcccc
Confidence 7643220 11122234577789999999999999999999999999999999999875422100 00000000
Q ss_pred cccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccccccC
Q 039720 907 KKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEIFIG 968 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 968 (973)
......... ..........+..++..+.+++.+||+.||++|||++|+++.|+++.+.+.|
T Consensus 235 ~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l~g 295 (295)
T 3ugc_A 235 QMIVFHLIE-LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 295 (295)
T ss_dssp HHHHHHHHH-HHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC---
T ss_pred chhHHHHHH-HHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhccC
Confidence 000000000 0000111222334556788999999999999999999999999999876643
No 60
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=6e-39 Score=371.07 Aligned_cols=193 Identities=22% Similarity=0.231 Sum_probs=107.2
Q ss_pred cccCCCcCCCCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhcc
Q 039720 77 FLSPYIGNLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGN 156 (973)
Q Consensus 77 ~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~ 156 (973)
..+..++++++|++|+|++|++++ +| .++.+++|++|+|++|.+++ +| ++.+++|++|++++|++.+. + +++
T Consensus 33 ~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~-~--~~~ 104 (457)
T 3bz5_A 33 TDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNL-D--VTP 104 (457)
T ss_dssp TSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC-C--CTT
T ss_pred ccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCcee-e--cCC
Confidence 344456777888888888888875 45 67888888888888888875 33 55555555555555554432 1 444
Q ss_pred ccccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEE
Q 039720 157 WLKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAY 236 (973)
Q Consensus 157 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 236 (973)
+++|++|++++|++++ +| ++++++|++|++++|++++. .++++++|++|+
T Consensus 105 l~~L~~L~L~~N~l~~-------------------------l~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~ 154 (457)
T 3bz5_A 105 LTKLTYLNCDTNKLTK-------------------------LD--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELD 154 (457)
T ss_dssp CTTCCEEECCSSCCSC-------------------------CC--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEE
T ss_pred CCcCCEEECCCCcCCe-------------------------ec--CCCCCcCCEEECCCCcccee---ccccCCcCCEEE
Confidence 4444444444444443 22 44444444444444444432 144444555555
Q ss_pred ccCCccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceecccccCC
Q 039720 237 LFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNLG 316 (973)
Q Consensus 237 L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 316 (973)
+++|+..+.++ +..+++|++|++++|++++. | +..+++|++|++++|++++. .+..+++|++|+|++|+++
T Consensus 155 l~~n~~~~~~~---~~~l~~L~~L~ls~n~l~~l-~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~ 225 (457)
T 3bz5_A 155 CHLNKKITKLD---VTPQTQLTTLDCSFNKITEL-D--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLT 225 (457)
T ss_dssp CTTCSCCCCCC---CTTCTTCCEEECCSSCCCCC-C--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCS
T ss_pred CCCCCcccccc---cccCCcCCEEECCCCcccee-c--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCccc
Confidence 55553333332 12455566666666665542 3 55556666666666666543 2555555555555555543
No 61
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2.2e-39 Score=355.29 Aligned_cols=268 Identities=25% Similarity=0.389 Sum_probs=209.1
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHh--cCCCCceeEEeEeeecccCCCce
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRN--IRHRNLIKIITICSSIDFKGADF 750 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~~~~~~~~ 750 (973)
.++|++.+.||+|+||+||+|++ +++.||||++... ....+..|.+++.. ++||||+++++++... ......
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~-~~~~~~ 80 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTS-RHSSTQ 80 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEE-ETTEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccc-cCCCce
Confidence 46899999999999999999998 7999999999643 34556667777766 7899999999987653 344567
Q ss_pred EEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHH--------hcCCCCeEecCCCCCcEEecCCCcEEEec
Q 039720 751 KAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLH--------NHCQPPIVHGDLKPSNVLLDHDMVAHVSD 822 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH--------~~~~~~ivHrDik~~NILl~~~~~~kl~D 822 (973)
.++||||+++|+|.++++.. ..++..++.++.|++.||+||| +. +|+||||||+||+++.++.+||+|
T Consensus 81 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~D 156 (301)
T 3q4u_A 81 LWLITHYHEMGSLYDYLQLT-TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIAD 156 (301)
T ss_dssp EEEEECCCTTCBHHHHHTTC-CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECC
T ss_pred eEEehhhccCCCHHHHHhhc-ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEee
Confidence 89999999999999999654 5677889999999999999999 77 999999999999999999999999
Q ss_pred cccchhccCCCCccCCCCCcccccccccccccCcccccCC------CCCcccchHHHHHHHHHHHhC----------CCC
Q 039720 823 FGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGG------DLSMTGDVYSFGILLLEMFTR----------RRP 886 (973)
Q Consensus 823 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwSlG~ll~elltg----------~~P 886 (973)
||+|+......... ........||+.|+|||++.+. .++.++|||||||++|||++| +.|
T Consensus 157 fg~a~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~p 232 (301)
T 3q4u_A 157 LGLAVMHSQSTNQL----DVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPP 232 (301)
T ss_dssp CTTCEEEETTTTEE----ECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred CCCeeecccccccc----cccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccc
Confidence 99998654422100 1112234799999999998876 456799999999999999999 888
Q ss_pred CCCCCCCCccHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhc
Q 039720 887 TDNMFNDGLTLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAV 962 (973)
Q Consensus 887 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 962 (973)
|...................... .+.. ........++..+.+++.+||+.||++|||++|+++.|+++
T Consensus 233 f~~~~~~~~~~~~~~~~~~~~~~----~~~~----~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 233 FYDVVPNDPSFEDMRKVVCVDQQ----RPNI----PNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TTTTSCSSCCHHHHHHHHTTSCC----CCCC----CGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred ccccCCCCcchhhhhHHHhccCC----CCCC----ChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 87655544333333222211110 1111 00112345678899999999999999999999999999986
No 62
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.3e-39 Score=364.55 Aligned_cols=252 Identities=19% Similarity=0.282 Sum_probs=206.7
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccch------hHHHHHHHHHHHHhcCCCCceeEEeEeeecccC
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKG------ATKSFVAECEALRNIRHRNLIKIITICSSIDFK 746 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 746 (973)
.++|++.+.||+|+||+||+|+++.+|+.||+|+++..... ..+.+.+|+.+++.++||||+++++++..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~---- 86 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYEN---- 86 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEEC----
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEe----
Confidence 46799999999999999999999999999999999754321 34678999999999999999999998654
Q ss_pred CCceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCC----cEEEec
Q 039720 747 GADFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDM----VAHVSD 822 (973)
Q Consensus 747 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~----~~kl~D 822 (973)
....++||||+++|+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+||+++.++ .+||+|
T Consensus 87 -~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~D 162 (361)
T 2yab_A 87 -RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLID 162 (361)
T ss_dssp -SSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred -CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEe
Confidence 478999999999999999998888888999999999999999999999 999999999999998877 799999
Q ss_pred cccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhh
Q 039720 823 FGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAK 902 (973)
Q Consensus 823 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~ 902 (973)
||+++..... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||......+ . ...
T Consensus 163 FG~a~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~--~--~~~ 229 (361)
T 2yab_A 163 FGLAHEIEDG---------VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE--T--LAN 229 (361)
T ss_dssp CSSCEECCTT---------CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH--H--HHH
T ss_pred cCCceEcCCC---------CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH--H--HHH
Confidence 9999866432 12234579999999999999999999999999999999999999997542211 1 111
Q ss_pred HhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 039720 903 MALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVK 957 (973)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 957 (973)
.... . ...+ ...+......+.+++.+||..||++|||++|+++
T Consensus 230 i~~~-~--~~~~---------~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 230 ITAV-S--YDFD---------EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HHTT-C--CCCC---------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHhc-C--CCCC---------chhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1000 0 0000 0111233456778999999999999999999985
No 63
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.2e-39 Score=367.39 Aligned_cols=260 Identities=23% Similarity=0.402 Sum_probs=208.9
Q ss_pred hhcCCcCCccccccceeEEEEEEC-------CCCcEEEEEEeeccc-chhHHHHHHHHHHHHhc-CCCCceeEEeEeeec
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLG-------EDGMSVAVKVMNLDK-KGATKSFVAECEALRNI-RHRNLIKIITICSSI 743 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~-------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 743 (973)
.++|++.+.||+|+||+||+|++. .++..||||+++... ....+.+.+|+.+++.+ +||||+++++++..
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~- 158 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ- 158 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS-
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc-
Confidence 468999999999999999999874 355689999997553 33456799999999999 89999999998654
Q ss_pred ccCCCceEEEEEeeccCCCHHHHhhhcC----------------CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 039720 744 DFKGADFKAIVYEYMQYGSVDDWLHHTN----------------DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKP 807 (973)
Q Consensus 744 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~----------------~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~ 807 (973)
....++||||+++|+|.+++.... .....+++.++.||+.||+|||++ +|+||||||
T Consensus 159 ----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp 231 (370)
T 2psq_A 159 ----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAA 231 (370)
T ss_dssp ----SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCG
T ss_pred ----CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ceeccccch
Confidence 467899999999999999998653 245677889999999999999999 999999999
Q ss_pred CcEEecCCCcEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCC
Q 039720 808 SNVLLDHDMVAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRP 886 (973)
Q Consensus 808 ~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~P 886 (973)
+|||++.++.+||+|||+++....... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.|
T Consensus 232 ~NIll~~~~~~kl~DFG~a~~~~~~~~------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p 305 (370)
T 2psq_A 232 RNVLVTENNVMKIADFGLARDINNIDY------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 305 (370)
T ss_dssp GGEEECTTCCEEECCCSSCEETTCCCT------TCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred hhEEECCCCCEEEccccCCcccCcccc------eecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCC
Confidence 999999999999999999986644221 112233457889999999999999999999999999999999 9999
Q ss_pred CCCCCCCCccHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhcccc
Q 039720 887 TDNMFNDGLTLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEI 965 (973)
Q Consensus 887 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 965 (973)
|......+ +....... .....+..+...+.+++.+||+.||++||+++|+++.|+++...
T Consensus 306 ~~~~~~~~--~~~~~~~~-----------------~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~ 365 (370)
T 2psq_A 306 YPGIPVEE--LFKLLKEG-----------------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 365 (370)
T ss_dssp STTCCGGG--HHHHHHTT-----------------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHH--HHHHHhcC-----------------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 97643221 11111000 00111233455678999999999999999999999999987543
No 64
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=4e-39 Score=356.33 Aligned_cols=276 Identities=19% Similarity=0.239 Sum_probs=215.1
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK-KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFK 751 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 751 (973)
.++|++.+.||+|+||+||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++... .....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~~~ 84 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEET---TTRHK 84 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECT---TTCCE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecC---CCceE
Confidence 368999999999999999999999999999999997543 33456788999999999999999999987542 34578
Q ss_pred EEEEeeccCCCHHHHhhhcCC---CchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe----cCCCcEEEeccc
Q 039720 752 AIVYEYMQYGSVDDWLHHTND---KLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLL----DHDMVAHVSDFG 824 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~~---~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl----~~~~~~kl~Dfg 824 (973)
++||||+++|+|.+++..... .++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||
T Consensus 85 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg 161 (319)
T 4euu_A 85 VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (319)
T ss_dssp EEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCT
T ss_pred EEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCC
Confidence 999999999999999986543 67788999999999999999999 99999999999999 788889999999
Q ss_pred cchhccCCCCccCCCCCcccccccccccccCccccc--------CCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCcc
Q 039720 825 LARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGM--------GGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLT 896 (973)
Q Consensus 825 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~ 896 (973)
+++..... .......||+.|+|||++. +..++.++|||||||++|||++|+.||.........
T Consensus 162 ~a~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~ 232 (319)
T 4euu_A 162 AARELEDD---------EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN 232 (319)
T ss_dssp TCEECCTT---------CCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGC
T ss_pred CceecCCC---------CceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchh
Confidence 99866432 1223456999999999876 578899999999999999999999999765443222
Q ss_pred Hhhhh---hHhcCcccccc---cCcccc--ccc-CCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhcc
Q 039720 897 LHGYA---KMALPKKVMGI---VDPSLL--MEA-RGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVG 963 (973)
Q Consensus 897 ~~~~~---~~~~~~~~~~~---~~~~~~--~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 963 (973)
..... ....+...... ...... ... ............+.+++.+||+.||++|||++|+++...+..
T Consensus 233 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 233 KEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp HHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 21111 11111111111 111110 000 112334567788899999999999999999999999988653
No 65
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=4.9e-39 Score=355.44 Aligned_cols=262 Identities=22% Similarity=0.293 Sum_probs=211.1
Q ss_pred cccHHHHHHHhh----------cCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCC
Q 039720 663 IVSYAELSKATK----------EFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRN 732 (973)
Q Consensus 663 ~~~~~~~~~~~~----------~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n 732 (973)
.++.+++..+++ .|...+.||+|+||.||+|++..+|+.||||++........+.+.+|+.+++.++|||
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n 103 (321)
T 2c30_A 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103 (321)
T ss_dssp -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTT
T ss_pred cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCC
Confidence 345555555554 3777789999999999999999899999999998776666788999999999999999
Q ss_pred ceeEEeEeeecccCCCceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe
Q 039720 733 LIKIITICSSIDFKGADFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLL 812 (973)
Q Consensus 733 iv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl 812 (973)
|+++++++... +..++||||+++|+|.+++... ...+..+..++.|++.||+|||+. +|+||||||+||++
T Consensus 104 iv~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~-~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll 174 (321)
T 2c30_A 104 VVEMYKSYLVG-----EELWVLMEFLQGGALTDIVSQV-RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILL 174 (321)
T ss_dssp BCCEEEEEEET-----TEEEEEECCCCSCBHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEE
T ss_pred cceEEEEEEEC-----CEEEEEEecCCCCCHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEE
Confidence 99999987653 7899999999999999998754 567888999999999999999999 99999999999999
Q ss_pred cCCCcEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCC
Q 039720 813 DHDMVAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFN 892 (973)
Q Consensus 813 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~ 892 (973)
+.++.+||+|||++...... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 175 ~~~~~~kl~Dfg~~~~~~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~ 246 (321)
T 2c30_A 175 TLDGRVKLSDFGFCAQISKD--------VPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP 246 (321)
T ss_dssp CTTCCEEECCCTTCEECCSS--------SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH
T ss_pred CCCCcEEEeeeeeeeecccC--------ccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 99999999999999865432 1122345799999999999999999999999999999999999999975422
Q ss_pred CCccHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 893 DGLTLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
. ........ ...+.. ......+..+.+++.+||+.||++|||++|+++.
T Consensus 247 ~--~~~~~~~~--------~~~~~~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 247 V--QAMKRLRD--------SPPPKL-------KNSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp H--HHHHHHHH--------SSCCCC-------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred H--HHHHHHhc--------CCCCCc-------CccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1 11111100 001110 1112234567789999999999999999999875
No 66
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=6.9e-40 Score=362.93 Aligned_cols=263 Identities=26% Similarity=0.387 Sum_probs=208.5
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCc---EEEEEEeecc-cchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCC
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGM---SVAVKVMNLD-KKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGA 748 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 748 (973)
.++|++.+.||+|+||+||+|++..++. .||||+++.. .....+.+.+|+.+++.++||||+++++++.. .
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~ 122 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTR-----G 122 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECG-----G
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-----C
Confidence 3679999999999999999999976554 5999999754 33345679999999999999999999998654 4
Q ss_pred ceEEEEEeeccCCCHHHHhhhc-CCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccch
Q 039720 749 DFKAIVYEYMQYGSVDDWLHHT-NDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 827 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~ 827 (973)
...++||||+++|+|.+++... ..+.+..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 123 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 199 (325)
T 3kul_A 123 RLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSR 199 (325)
T ss_dssp GCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred CccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCccc
Confidence 7789999999999999999654 4667788999999999999999999 99999999999999999999999999998
Q ss_pred hccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCccHhhhhhHhcC
Q 039720 828 FLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHGYAKMALP 906 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~ 906 (973)
...... ..........+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... +.......
T Consensus 200 ~~~~~~-----~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~~~~~-- 270 (325)
T 3kul_A 200 VLEDDP-----DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD--VISSVEEG-- 270 (325)
T ss_dssp ECC---------CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH--HHHHHHTT--
T ss_pred ccccCc-----cceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH--HHHHHHcC--
Confidence 764321 11112223346778999999998999999999999999999999 999997643221 11110000
Q ss_pred cccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhcccccc
Q 039720 907 KKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEIFI 967 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 967 (973)
.....+..++..+.+++.+||+.||++||+++|+++.|+++.....
T Consensus 271 ---------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 271 ---------------YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp ---------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred ---------------CCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 0011122345677899999999999999999999999999864433
No 67
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=9.5e-40 Score=361.32 Aligned_cols=255 Identities=22% Similarity=0.311 Sum_probs=206.5
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccc-hhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKK-GATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFK 751 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 751 (973)
.++|++.+.||+|+||+||+|++..+++.||||++..... ...+.+.+|+.+++.++||||+++++++.. ....
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-----~~~~ 80 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE-----GNIQ 80 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEEC-----SSEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEec-----CCeE
Confidence 3689999999999999999999999999999999975432 234668899999999999999999998654 4788
Q ss_pred EEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhccC
Q 039720 752 AIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLSH 831 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~~ 831 (973)
++||||+++|+|.+++.....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 157 (323)
T 3tki_A 81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRY 157 (323)
T ss_dssp EEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred EEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceecc
Confidence 99999999999999998887888899999999999999999999 999999999999999999999999999986532
Q ss_pred CCCccCCCCCcccccccccccccCcccccCCCC-CcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCcccc
Q 039720 832 HPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDL-SMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKVM 910 (973)
Q Consensus 832 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
.. .........||+.|+|||++.+..+ +.++|||||||++|+|++|+.||............+......
T Consensus 158 ~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~---- 227 (323)
T 3tki_A 158 NN------RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY---- 227 (323)
T ss_dssp TT------EECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTT----
T ss_pred CC------cccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccccc----
Confidence 21 1122234579999999999988776 788999999999999999999998654433222222111100
Q ss_pred cccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 911 GIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
..........+.+++.+||+.||++|||++|+++.
T Consensus 228 -------------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 228 -------------LNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp -------------STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -------------CCccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 01112334566789999999999999999999875
No 68
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-39 Score=358.08 Aligned_cols=253 Identities=18% Similarity=0.276 Sum_probs=206.8
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceEE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFKA 752 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 752 (973)
.++|++.+.||+|+||+||+|++..+++.||+|++.... .....+.+|+.+++.++||||+++++++.. ....+
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-----~~~~~ 77 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFES-----MEELV 77 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEE-----TTEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEec-----CCEEE
Confidence 468999999999999999999999999999999997543 345668899999999999999999998755 37899
Q ss_pred EEEeeccCCCHHHHhhhcC-CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecC--CCcEEEeccccchhc
Q 039720 753 IVYEYMQYGSVDDWLHHTN-DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDH--DMVAHVSDFGLARFL 829 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~--~~~~kl~Dfg~a~~~ 829 (973)
+||||+++|+|.+++.... ..++.+++.++.|++.|++|||+. +|+||||||+||+++. ++.+||+|||+++..
T Consensus 78 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~ 154 (321)
T 1tki_A 78 MIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL 154 (321)
T ss_dssp EEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEEC
T ss_pred EEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeEC
Confidence 9999999999999997654 577888999999999999999999 9999999999999987 789999999999866
Q ss_pred cCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCccc
Q 039720 830 SHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKV 909 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
.. ........||+.|+|||++.+..++.++||||+||++|+|++|+.||....... .+.........
T Consensus 155 ~~---------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~--- 221 (321)
T 1tki_A 155 KP---------GDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ-IIENIMNAEYT--- 221 (321)
T ss_dssp CT---------TCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHHTCCC---
T ss_pred CC---------CCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHH-HHHHHHcCCCC---
Confidence 43 223345679999999999999889999999999999999999999997543211 01111000000
Q ss_pred ccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 039720 910 MGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKL 959 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 959 (973)
.+ .......+..+.+++.+||..||++|||++|+++.-
T Consensus 222 ---~~---------~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp 259 (321)
T 1tki_A 222 ---FD---------EEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHP 259 (321)
T ss_dssp ---CC---------HHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred ---CC---------hhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcCh
Confidence 00 011123355678999999999999999999999854
No 69
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.6e-39 Score=357.34 Aligned_cols=253 Identities=20% Similarity=0.306 Sum_probs=206.9
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccch------hHHHHHHHHHHHHhcCCCCceeEEeEeeecccC
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKG------ATKSFVAECEALRNIRHRNLIKIITICSSIDFK 746 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 746 (973)
.++|++.+.||+|+||+||+|++..+|+.||+|++...... ..+.+.+|+.+++.++||||+++++++..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~---- 85 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN---- 85 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC----
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEe----
Confidence 35799999999999999999999999999999999754321 35778999999999999999999998654
Q ss_pred CCceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCC----cEEEec
Q 039720 747 GADFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDM----VAHVSD 822 (973)
Q Consensus 747 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~----~~kl~D 822 (973)
....++||||+++|+|.+++.....+++..++.++.|++.||.|||+. +|+||||||+||+++.++ .+||+|
T Consensus 86 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~D 161 (326)
T 2y0a_A 86 -KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIID 161 (326)
T ss_dssp -SSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECC
T ss_pred -CCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEE
Confidence 478999999999999999998887888899999999999999999999 999999999999999887 899999
Q ss_pred cccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhh
Q 039720 823 FGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAK 902 (973)
Q Consensus 823 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~ 902 (973)
||+++..... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||......+ .+.....
T Consensus 162 fg~a~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~~~~ 231 (326)
T 2y0a_A 162 FGLAHKIDFG---------NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-TLANVSA 231 (326)
T ss_dssp CTTCEECCTT---------SCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHHHHHH
T ss_pred CCCCeECCCC---------CccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH-HHHHHHh
Confidence 9999866432 12234569999999999999999999999999999999999999997542211 0111000
Q ss_pred HhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 903 MALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
. ..... .......+..+.+++.+||+.||++|||++|+++.
T Consensus 232 ~----------~~~~~-----~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 232 V----------NYEFE-----DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp T----------CCCCC-----HHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred c----------CCCcC-----ccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0 00000 01112334567789999999999999999999874
No 70
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2e-39 Score=359.33 Aligned_cols=249 Identities=24% Similarity=0.332 Sum_probs=204.8
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCc
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK---KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGAD 749 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 749 (973)
.++|++.+.||+|+||+||+|++..+++.||||++.... ......+.+|+.+++.++||||+++++++.. ..
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-----~~ 82 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITT-----PT 82 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEEC-----SS
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-----CC
Confidence 368999999999999999999999999999999997432 2234578899999999999999999998654 47
Q ss_pred eEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhc
Q 039720 750 FKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 829 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~ 829 (973)
..++||||+ +|+|.+++...+..++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 83 ~~~lv~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~ 158 (336)
T 3h4j_B 83 DIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIM 158 (336)
T ss_dssp EEEEEECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTT
T ss_pred EEEEEEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceec
Confidence 899999999 789999998888888999999999999999999999 9999999999999999999999999999865
Q ss_pred cCCCCccCCCCCcccccccccccccCcccccCCCC-CcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCcc
Q 039720 830 SHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDL-SMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKK 908 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 908 (973)
... ......+||+.|+|||++.+..+ +.++||||+||++|+|++|+.||........
T Consensus 159 ~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~------------- 216 (336)
T 3h4j_B 159 TDG---------NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL------------- 216 (336)
T ss_dssp TTS---------BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC-------------
T ss_pred cCC---------cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH-------------
Confidence 432 22334579999999999988876 7899999999999999999999975432211
Q ss_pred cccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 039720 909 VMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKL 959 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 959 (973)
...+... . ...+...+..+.+++.+||+.||++|||++|+++.-
T Consensus 217 -~~~i~~~---~---~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 260 (336)
T 3h4j_B 217 -FKKVNSC---V---YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDP 260 (336)
T ss_dssp -BCCCCSS---C---CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCH
T ss_pred -HHHHHcC---C---CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhCh
Confidence 0000000 0 011122345667899999999999999999998753
No 71
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.1e-38 Score=348.65 Aligned_cols=281 Identities=28% Similarity=0.434 Sum_probs=222.6
Q ss_pred CCCcccHHHHHHHhhcCCcC------CccccccceeEEEEEECCCCcEEEEEEeeccc----chhHHHHHHHHHHHHhcC
Q 039720 660 QFPIVSYAELSKATKEFSSS------NRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK----KGATKSFVAECEALRNIR 729 (973)
Q Consensus 660 ~~~~~~~~~~~~~~~~y~~~------~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~ 729 (973)
..+.+++.++..+++.|... +.||+|+||+||+|++ +++.||||++.... ....+.+.+|+.+++.++
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 88 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ 88 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcC
Confidence 45678889999999888777 8999999999999997 68899999996432 334577999999999999
Q ss_pred CCCceeEEeEeeecccCCCceEEEEEeeccCCCHHHHhhhc---CCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCC
Q 039720 730 HRNLIKIITICSSIDFKGADFKAIVYEYMQYGSVDDWLHHT---NDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLK 806 (973)
Q Consensus 730 h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik 806 (973)
||||+++++++.. ....++||||+++|+|.+++... ....+..++.++.|++.||.|||+. +|+|||||
T Consensus 89 h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlk 160 (307)
T 2nru_A 89 HENLVELLGFSSD-----GDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIK 160 (307)
T ss_dssp CTTBCCEEEEECS-----SSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCC
T ss_pred CCCeEEEEEEEec-----CCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCC
Confidence 9999999998654 46789999999999999998742 3466788899999999999999999 99999999
Q ss_pred CCcEEecCCCcEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCC
Q 039720 807 PSNVLLDHDMVAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRP 886 (973)
Q Consensus 807 ~~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~P 886 (973)
|+||+++.++.+||+|||+++...... .........||+.|+|||++.+ .++.++||||||+++|+|++|+.|
T Consensus 161 p~Nili~~~~~~kl~Dfg~~~~~~~~~------~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p 233 (307)
T 2nru_A 161 SANILLDEAFTAKISDFGLARASEKFA------QTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPA 233 (307)
T ss_dssp GGGEEECTTCCEEECCCTTCEECCSCS------SCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCS
T ss_pred HHHEEEcCCCcEEEeeccccccccccc------ccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCC
Confidence 999999999999999999998654321 1112233568999999998765 588999999999999999999999
Q ss_pred CCCCCCCCccHhhhhhHh--cCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccc
Q 039720 887 TDNMFNDGLTLHGYAKMA--LPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGE 964 (973)
Q Consensus 887 f~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 964 (973)
|......... ..+.... ....+.+.+++.. ......++..+.+++.+||+.||++||+++|+++.|+++..
T Consensus 234 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 234 VDEHREPQLL-LDIKEEIEDEEKTIEDYIDKKM------NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp BCTTBSSSBT-THHHHHHHTTSCCHHHHSCSSC------SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred cccCcchHHH-HHHHHHhhhhhhhhhhhccccc------cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 9876543221 1111111 1111222222222 23345677889999999999999999999999999998753
No 72
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.1e-38 Score=368.72 Aligned_cols=368 Identities=20% Similarity=0.189 Sum_probs=279.1
Q ss_pred cCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccceeeccCCccccc
Q 039720 94 ANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLYGNQLTGQ 173 (973)
Q Consensus 94 ~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 173 (973)
......+..+..++++++|++|+|++|.+++ +| .+ +.+++|++|+|++|++++
T Consensus 26 ~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l------------------------~~l~~L~~L~Ls~n~l~~- 78 (457)
T 3bz5_A 26 AAFEMQATDTISEEQLATLTSLDCHNSSITD-MT-GI------------------------EKLTGLTKLICTSNNITT- 78 (457)
T ss_dssp HHTTCCTTSEEEHHHHTTCCEEECCSSCCCC-CT-TG------------------------GGCTTCSEEECCSSCCSC-
T ss_pred HhcCcCcccccChhHcCCCCEEEccCCCccc-Ch-hh------------------------cccCCCCEEEccCCcCCe-
Confidence 3444555566678888888888888888874 34 33 455777888888888886
Q ss_pred CCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccCCccccCCCcccccC
Q 039720 174 LPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFKGSLPVCLGFN 253 (973)
Q Consensus 174 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~ 253 (973)
+| ++++++|++|++++|++++. | ++++++|++|++++|++++. | +..+++|++|++++|++++ +| + .+
T Consensus 79 ~~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~-l~--l-~~ 146 (457)
T 3bz5_A 79 LD--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTE-ID--V-SH 146 (457)
T ss_dssp CC--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSC-CC--C-TT
T ss_pred Ec--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCccce-ec--c-cc
Confidence 44 88999999999999999964 4 89999999999999999974 4 8999999999999999995 54 3 37
Q ss_pred CCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceecccccCCCCCCCChhhhhhhcccc
Q 039720 254 LPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNLGTRTSTDLDFITLLTNCS 333 (973)
Q Consensus 254 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~ 333 (973)
+++|++|++++|...+.+ .+..+++|++|++++|++++.. +..+++|+.|++++|+++.++ +..++
T Consensus 147 l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l~---l~~l~~L~~L~l~~N~l~~~~---------l~~l~ 212 (457)
T 3bz5_A 147 NTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITELD---VSQNKLLNRLNCDTNNITKLD---------LNQNI 212 (457)
T ss_dssp CTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCCC---CTTCTTCCEEECCSSCCSCCC---------CTTCT
T ss_pred CCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccceec---cccCCCCCEEECcCCcCCeec---------cccCC
Confidence 999999999999665555 5889999999999999999853 889999999999999987642 34556
Q ss_pred cceeeccccccccCCCChhhhhhhhhhhHhhhcCCccccCCCccccCCCCcCEEEcccccCCCCCCccccCCCCCCeEEc
Q 039720 334 KLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEIRNLFNLNGLGLEYNQLTGTIPPAIGELRNLQYLGL 413 (973)
Q Consensus 334 ~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 413 (973)
+|+.|++++|+++ + +| +..+++|+.|++++|++++.. ++.+++|+.|++
T Consensus 213 ~L~~L~Ls~N~l~-------------------------~-ip--~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l 261 (457)
T 3bz5_A 213 QLTFLDCSSNKLT-------------------------E-ID--VTPLTQLTYFDCSVNPLTELD---VSTLSKLTTLHC 261 (457)
T ss_dssp TCSEEECCSSCCS-------------------------C-CC--CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEEC
T ss_pred CCCEEECcCCccc-------------------------c-cC--ccccCCCCEEEeeCCcCCCcC---HHHCCCCCEEec
Confidence 6666666655544 2 33 566777888888888887653 345667777777
Q ss_pred cCcccCCCCCCccCCcCccceEEcCCCccccccccccccccccccccccCcccccCCCccccccccccceeeccCCcccc
Q 039720 414 VGNNIRGIIPDPIGNLTLLNVLQLGFNKLQGSIPSYLGKCQNLMQLSAPNNKLNGTLPPQIFGITTLSKLLDLSENHLSG 493 (973)
Q Consensus 414 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~ 493 (973)
++| +|+.|++++|.+.+.+| ++.+++|+.|++++|.+.+.+|... ..+ +.|+++
T Consensus 262 ~~n--------------~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~---~~L-~~L~l~------ 315 (457)
T 3bz5_A 262 IQT--------------DLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQA---AGI-TELDLS------ 315 (457)
T ss_dssp TTC--------------CCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTT---CCC-SCCCCT------
T ss_pred cCC--------------CCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCC---Ccc-eEechh------
Confidence 665 35567788888777777 4677888888888888776666422 112 234443
Q ss_pred cCCcccccccccceeccccCcccccccccccCccchhhhcccCcccccccccchhhhccCCeecCCCCccccccCCCCCC
Q 039720 494 SIPLEVGNLKSLVQLDISRNNFSNEIPVTLSACTTLEYLLMQGNSFNGSIPQSLNALKSIKELDLSCNNLSGQIPIHLGN 573 (973)
Q Consensus 494 ~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 573 (973)
.+++|+.|++++|++++. + ++++++|+.|++++|+|++ ++.|..|++++|+++|. ..
T Consensus 316 -------~~~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~ 372 (457)
T 3bz5_A 316 -------QNPKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQ 372 (457)
T ss_dssp -------TCTTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EE
T ss_pred -------hcccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-----ce
Confidence 336788888888888873 3 7888888888888888885 24566778888888875 35
Q ss_pred CCccceEeccCCcCcCcCCCC
Q 039720 574 LPFLEYLNLSYNHFEGKVPKK 594 (973)
Q Consensus 574 l~~L~~L~ls~N~l~~~~p~~ 594 (973)
+..|+.+++++|+++|.+|..
T Consensus 373 ~~~l~~l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 373 TITMPKETLTNNSLTIAVSPD 393 (457)
T ss_dssp EEECCCBCCBTTBEEEECCTT
T ss_pred eeecCccccccCcEEEEcChh
Confidence 566778888888888888864
No 73
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=5.2e-40 Score=366.94 Aligned_cols=249 Identities=24% Similarity=0.286 Sum_probs=200.8
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecc---cchhHHHHHHHHHHHHhc-CCCCceeEEeEeeecccCCC
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLD---KKGATKSFVAECEALRNI-RHRNLIKIITICSSIDFKGA 748 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~ 748 (973)
.++|++.+.||+|+||+||+|+++.+|+.||||+++.. .....+.+.+|..+++.+ +||||+++++++.. .
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~-----~ 96 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQT-----P 96 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----S
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEe-----C
Confidence 46899999999999999999999999999999999754 233456788999999988 69999999998643 5
Q ss_pred ceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchh
Q 039720 749 DFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 828 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~ 828 (973)
...++||||+++|+|.+++.....+++..++.++.||+.||+|||++ +|+||||||+|||++.++++||+|||+|+.
T Consensus 97 ~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~ 173 (353)
T 3txo_A 97 DRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKE 173 (353)
T ss_dssp SEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred CEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceee
Confidence 78999999999999999999888889999999999999999999999 999999999999999999999999999975
Q ss_pred ccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCcc
Q 039720 829 LSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKK 908 (973)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 908 (973)
.... .......+||+.|+|||++.+..|+.++||||+||++|||++|+.||......+ + +......
T Consensus 174 ~~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~--~--~~~i~~~-- 239 (353)
T 3txo_A 174 GICN--------GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD--L--FEAILND-- 239 (353)
T ss_dssp SCC-----------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--H--HHHHHHC--
T ss_pred cccC--------CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHH--H--HHHHHcC--
Confidence 3221 223345679999999999999899999999999999999999999997543211 1 1111000
Q ss_pred cccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCH------HHHHH
Q 039720 909 VMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQM------TAVVK 957 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~ 957 (973)
. ...+......+.+++.+|++.||++||++ +|+++
T Consensus 240 -------~-------~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 240 -------E-------VVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp -------C-------CCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred -------C-------CCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 0 00111233456788889999999999998 77765
No 74
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=5.1e-39 Score=361.66 Aligned_cols=251 Identities=23% Similarity=0.309 Sum_probs=205.0
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCc
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK---KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGAD 749 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 749 (973)
.++|++.+.||+|+||+||+|++..+++.||+|++.... ......+.+|+.+++.++||||+++++++.. ..
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~-----~~ 88 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQD-----EE 88 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----SS
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-----CC
Confidence 368999999999999999999999999999999997432 3345678899999999999999999998654 47
Q ss_pred eEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhc
Q 039720 750 FKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 829 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~ 829 (973)
..++||||+.+|+|.+++.....+.+..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|+..
T Consensus 89 ~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~ 165 (384)
T 4fr4_A 89 DMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAML 165 (384)
T ss_dssp EEEEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeec
Confidence 8999999999999999999888888899999999999999999999 9999999999999999999999999999865
Q ss_pred cCCCCccCCCCCcccccccccccccCcccccC---CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcC
Q 039720 830 SHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMG---GDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALP 906 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 906 (973)
.. ........||+.|+|||++.+ ..|+.++|||||||++|||++|+.||........ .........
T Consensus 166 ~~---------~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~--~~~~~~~~~ 234 (384)
T 4fr4_A 166 PR---------ETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS--KEIVHTFET 234 (384)
T ss_dssp CT---------TCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCH--HHHHHHHHH
T ss_pred cC---------CCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccH--HHHHHHHhh
Confidence 43 223345679999999999864 4689999999999999999999999975433211 111111000
Q ss_pred cccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCC-HHHHHH
Q 039720 907 KKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQ-MTAVVK 957 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~ 957 (973)
. ....+..+...+.+++.+||+.||++||+ ++++.+
T Consensus 235 ~---------------~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 235 T---------------VVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp C---------------CCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred c---------------ccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 0 01111223456778999999999999998 676654
No 75
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2.9e-39 Score=364.85 Aligned_cols=255 Identities=21% Similarity=0.255 Sum_probs=203.0
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc---chhHHHHHHHHHHHHhc-CCCCceeEEeEeeecccCCC
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK---KGATKSFVAECEALRNI-RHRNLIKIITICSSIDFKGA 748 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~ 748 (973)
.++|++.+.||+|+||+||+|+++.+++.||+|+++... ....+.+..|..+++++ +||||+++++++. +.
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~-----~~ 125 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ-----TE 125 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEE-----CS
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEE-----EC
Confidence 468999999999999999999999999999999997543 22335578899999877 8999999999854 35
Q ss_pred ceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchh
Q 039720 749 DFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 828 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~ 828 (973)
...++||||+++|+|.+++...+.+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.
T Consensus 126 ~~~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~ 202 (396)
T 4dc2_A 126 SRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 202 (396)
T ss_dssp SEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred CEEEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeee
Confidence 78999999999999999999888889999999999999999999999 999999999999999999999999999985
Q ss_pred ccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCcc----HhhhhhHh
Q 039720 829 LSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLT----LHGYAKMA 904 (973)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~----~~~~~~~~ 904 (973)
.... .......+||+.|+|||++.+..|+.++|||||||++|||++|+.||......... ........
T Consensus 203 ~~~~--------~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i 274 (396)
T 4dc2_A 203 GLRP--------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 274 (396)
T ss_dssp CCCT--------TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHH
T ss_pred cccC--------CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHH
Confidence 3221 22344567999999999999999999999999999999999999999654321110 00000000
Q ss_pred cCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCH------HHHHHH
Q 039720 905 LPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQM------TAVVKK 958 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~~ 958 (973)
.. . . ...+......+.+++.+||+.||++||++ +|++++
T Consensus 275 ~~--------~----~---~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 275 LE--------K----Q---IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp HH--------C----C---CCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred hc--------c----c---cCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 00 0 0 01112234456788999999999999996 566553
No 76
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=5.9e-39 Score=368.70 Aligned_cols=256 Identities=20% Similarity=0.277 Sum_probs=206.6
Q ss_pred HHhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccc--hhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCC
Q 039720 671 KATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKK--GATKSFVAECEALRNIRHRNLIKIITICSSIDFKGA 748 (973)
Q Consensus 671 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 748 (973)
...++|++.+.||+|+||+||+|.+..+|+.||+|++..... ...+.+.+|+.+++.++||||+++++++.+ .
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-----~ 82 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE-----E 82 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEEC-----S
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEE-----C
Confidence 345789999999999999999999999999999999975542 334678999999999999999999998654 4
Q ss_pred ceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEec---CCCcEEEecccc
Q 039720 749 DFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLD---HDMVAHVSDFGL 825 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~---~~~~~kl~Dfg~ 825 (973)
...++||||+.+|+|.+.+.......+..+..++.||+.|+.|||++ +|+||||||+||+++ .++.+||+|||+
T Consensus 83 ~~~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~ 159 (444)
T 3soa_A 83 GHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGL 159 (444)
T ss_dssp SEEEEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSS
T ss_pred CEEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCce
Confidence 78999999999999999999888888999999999999999999999 999999999999998 467899999999
Q ss_pred chhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhc
Q 039720 826 ARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMAL 905 (973)
Q Consensus 826 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~ 905 (973)
++..... ........||+.|+|||++.+..|+.++||||+||++|+|++|+.||...... .+........
T Consensus 160 a~~~~~~--------~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~--~~~~~i~~~~ 229 (444)
T 3soa_A 160 AIEVEGE--------QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH--RLYQQIKAGA 229 (444)
T ss_dssp CBCCCTT--------CCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHTC
T ss_pred eEEecCC--------CceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH--HHHHHHHhCC
Confidence 9765432 12223457999999999999999999999999999999999999999754221 1111110000
Q ss_pred CcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 906 PKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
.+ .. .......+..+.+++.+||+.||++|||++|+++.
T Consensus 230 -------~~--~~-----~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 230 -------YD--FP-----SPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp -------CC--CC-----TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred -------CC--CC-----ccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 00 00 01112334567789999999999999999999874
No 77
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=5.6e-39 Score=360.58 Aligned_cols=254 Identities=20% Similarity=0.319 Sum_probs=206.7
Q ss_pred HhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCc
Q 039720 672 ATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK--KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGAD 749 (973)
Q Consensus 672 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 749 (973)
..++|++.+.||+|+||+||+|++..+|+.||+|++.... ....+.+.+|+.+++.++||||+++++++.+ ..
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-----~~ 101 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-----ES 101 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SS
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-----CC
Confidence 3568999999999999999999999999999999997543 2344678899999999999999999998654 47
Q ss_pred eEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCC---cEEEeccccc
Q 039720 750 FKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDM---VAHVSDFGLA 826 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~---~~kl~Dfg~a 826 (973)
..++||||+.+|+|.+++.......+..+..++.||+.||+|||++ +|+||||||+||+++.++ .+||+|||++
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a 178 (362)
T 2bdw_A 102 FHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA 178 (362)
T ss_dssp EEEEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcc
Confidence 8999999999999999998887888899999999999999999999 999999999999998654 5999999999
Q ss_pred hhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcC
Q 039720 827 RFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALP 906 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 906 (973)
...... .......||+.|+|||++.+..|+.++|||||||++|+|++|+.||...... .+........
T Consensus 179 ~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~--~~~~~i~~~~- 246 (362)
T 2bdw_A 179 IEVNDS---------EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--RLYAQIKAGA- 246 (362)
T ss_dssp BCCTTC---------CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTC-
T ss_pred eEecCC---------cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHhCC-
Confidence 865432 1223457999999999999999999999999999999999999999754221 1111110000
Q ss_pred cccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 907 KKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
.+ . ........+..+.+++.+||+.||++||+++|+++.
T Consensus 247 ------~~--~-----~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 247 ------YD--Y-----PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp ------CC--C-----CTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ------CC--C-----CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00 0 011112344567789999999999999999999865
No 78
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.3e-39 Score=366.77 Aligned_cols=269 Identities=21% Similarity=0.351 Sum_probs=213.0
Q ss_pred cHHHHHHHhhcCCcCCccccccceeEEEEE-----ECCCCcEEEEEEeeccc-chhHHHHHHHHHHHHhc-CCCCceeEE
Q 039720 665 SYAELSKATKEFSSSNRIGKGSFGFVYKGN-----LGEDGMSVAVKVMNLDK-KGATKSFVAECEALRNI-RHRNLIKII 737 (973)
Q Consensus 665 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~-----~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~ 737 (973)
....+....++|++.+.||+|+||.||+|+ ...+++.||||+++... ....+.+.+|+++++++ +||||++++
T Consensus 13 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~ 92 (359)
T 3vhe_A 13 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 92 (359)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeee
Confidence 334444567899999999999999999998 55677999999997543 33456799999999999 799999999
Q ss_pred eEeeecccCCCceEEEEEeeccCCCHHHHhhhcCC---------------------------------------------
Q 039720 738 TICSSIDFKGADFKAIVYEYMQYGSVDDWLHHTND--------------------------------------------- 772 (973)
Q Consensus 738 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------------------------------------------- 772 (973)
+++... ....++||||+++|+|.++++....
T Consensus 93 ~~~~~~----~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (359)
T 3vhe_A 93 GACTKP----GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFV 168 (359)
T ss_dssp EEECST----TSCCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------
T ss_pred eeeecC----CCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccc
Confidence 987542 3558999999999999999976543
Q ss_pred ---------------------CchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhccC
Q 039720 773 ---------------------KLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLSH 831 (973)
Q Consensus 773 ---------------------~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~~ 831 (973)
+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 245 (359)
T 3vhe_A 169 EEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYK 245 (359)
T ss_dssp ---------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTS
T ss_pred cccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecc
Confidence 56677899999999999999999 999999999999999999999999999986543
Q ss_pred CCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCccHhhhhhHhcCcccc
Q 039720 832 HPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHGYAKMALPKKVM 910 (973)
Q Consensus 832 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
.. .........||+.|+|||++.+..++.++|||||||++|||++ |+.||.......... ........
T Consensus 246 ~~------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~-~~~~~~~~---- 314 (359)
T 3vhe_A 246 DP------DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC-RRLKEGTR---- 314 (359)
T ss_dssp CT------TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHH-HHHHHTCC----
T ss_pred cc------cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHH-HHHHcCCC----
Confidence 21 1222334568899999999999999999999999999999998 999997654332111 11111000
Q ss_pred cccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccc
Q 039720 911 GIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGE 964 (973)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 964 (973)
...+..+...+.+++.+||+.||++|||++|++++|+++.+
T Consensus 315 -------------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 355 (359)
T 3vhe_A 315 -------------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 355 (359)
T ss_dssp -------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -------------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 01112234567789999999999999999999999998754
No 79
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=5e-39 Score=350.79 Aligned_cols=269 Identities=19% Similarity=0.251 Sum_probs=202.6
Q ss_pred hcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceE
Q 039720 674 KEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK--KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFK 751 (973)
Q Consensus 674 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 751 (973)
++|++.+.||+|+||+||+|++..+++.||||+++... ......+.+|+.++++++||||+++++++.. ....
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~ 76 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS-----DKKL 76 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-----TTEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEe-----CCEE
Confidence 57999999999999999999999999999999997543 2345778899999999999999999999765 4789
Q ss_pred EEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhccC
Q 039720 752 AIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLSH 831 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~~ 831 (973)
++||||+.++.+..+....+..++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 77 ~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 153 (292)
T 3o0g_A 77 TLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGI 153 (292)
T ss_dssp EEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred EEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence 99999998644444444456778888999999999999999999 999999999999999999999999999986543
Q ss_pred CCCccCCCCCcccccccccccccCcccccCCC-CCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCcc--
Q 039720 832 HPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGD-LSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKK-- 908 (973)
Q Consensus 832 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~-- 908 (973)
. ........||+.|+|||++.+.. ++.++||||+||++|+|++|..||.........+...........
T Consensus 154 ~--------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~ 225 (292)
T 3o0g_A 154 P--------VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEE 225 (292)
T ss_dssp C--------CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred c--------cccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChh
Confidence 2 22223456899999999987765 799999999999999999988886543332222222211111000
Q ss_pred ----cccccCcc----cccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 909 ----VMGIVDPS----LLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 909 ----~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
.....+.. .................+.+++.+|++.||++|||++|++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 226 QWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp TCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 00000000 000000111122344567789999999999999999999874
No 80
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=2.5e-39 Score=348.51 Aligned_cols=257 Identities=25% Similarity=0.395 Sum_probs=207.5
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceEE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFKA 752 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 752 (973)
.++|++.+.||+|+||+||+|++. ++..||+|+++.... ..+.+.+|++++++++||||+++++++.. ....+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 79 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSK-----EYPIY 79 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-----SSSEE
T ss_pred hhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEcc-----CCceE
Confidence 468999999999999999999985 677899999975443 34678999999999999999999998643 47789
Q ss_pred EEEeeccCCCHHHHhhhcC-CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhccC
Q 039720 753 IVYEYMQYGSVDDWLHHTN-DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLSH 831 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~~ 831 (973)
+||||+++++|.+++.... ..++..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.+.....
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 156 (268)
T 3sxs_A 80 IVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD 156 (268)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCT
T ss_pred EEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecch
Confidence 9999999999999998754 367788999999999999999999 999999999999999999999999999986643
Q ss_pred CCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCccHhhhhhHhcCcccc
Q 039720 832 HPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHGYAKMALPKKVM 910 (973)
Q Consensus 832 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
.. ........+|+.|+|||++.+..++.++||||+|+++|+|++ |+.||......... . .......
T Consensus 157 ~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~--~--~~~~~~~-- 223 (268)
T 3sxs_A 157 DQ-------YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVV--L--KVSQGHR-- 223 (268)
T ss_dssp TC-------EEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH--H--HHHTTCC--
T ss_pred hh-------hhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHH--H--HHHcCCC--
Confidence 22 112223446778999999998899999999999999999999 99999754322110 0 0000000
Q ss_pred cccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhcccc
Q 039720 911 GIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEI 965 (973)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 965 (973)
...+...+..+.+++.+||+.||++|||++|+++.|+++.+.
T Consensus 224 -------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 224 -------------LYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp -------------CCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred -------------CCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 001111234677899999999999999999999999998764
No 81
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=4.1e-39 Score=353.67 Aligned_cols=262 Identities=27% Similarity=0.438 Sum_probs=203.2
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCce
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK--KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADF 750 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 750 (973)
.++|.+.++||+|+||+||+|++. ..+|+|+++... ....+.+.+|++++++++||||+++++++.. +.
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~---~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------~~ 105 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK------DN 105 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS------SS
T ss_pred ccceEEEeEecCCCCeEEEEEEEC---CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc------Cc
Confidence 468999999999999999999874 358999987543 3345678999999999999999999997542 56
Q ss_pred EEEEEeeccCCCHHHHhhh-cCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhc
Q 039720 751 KAIVYEYMQYGSVDDWLHH-TNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 829 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~ 829 (973)
.++||||+.+++|.+++.. .....+.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 106 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~ 182 (307)
T 3lb7_A 106 LAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVK 182 (307)
T ss_dssp CEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC-
T ss_pred EEEEEecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceec
Confidence 8899999999999999974 44567788999999999999999999 9999999999999999999999999999754
Q ss_pred cCCCCccCCCCCcccccccccccccCccccc---CCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcC
Q 039720 830 SHHPFLVAPEGQSSSIEMKGTIGYIGPEYGM---GGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALP 906 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 906 (973)
.... .........||+.|+|||++. +..++.++|||||||++|||++|+.||......+...........
T Consensus 183 ~~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~- 255 (307)
T 3lb7_A 183 SRWS------GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYA- 255 (307)
T ss_dssp -----------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCC-
T ss_pred cccc------ccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCC-
Confidence 3211 122233456999999999986 667899999999999999999999999765432211111111100
Q ss_pred cccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccccc
Q 039720 907 KKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEIF 966 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 966 (973)
.+.. ......++..+.+++.+||+.||++||++.|+++.|+.+...+
T Consensus 256 -------~~~~------~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 256 -------SPDL------SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp -------CCCS------TTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred -------Ccch------hhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 0000 1111234567789999999999999999999999999886654
No 82
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=3.5e-39 Score=360.68 Aligned_cols=253 Identities=22% Similarity=0.323 Sum_probs=192.0
Q ss_pred HhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceE
Q 039720 672 ATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFK 751 (973)
Q Consensus 672 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 751 (973)
..++|++.+.||+|+||+||+|++..+++.||||+++... ..+.+.+|++++++++||||+++++++.. ....
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~~~~ 123 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFET-----PTEI 123 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEEC-----SSEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEec-----CCeE
Confidence 3467999999999999999999999999999999997543 34568889999999999999999998754 4789
Q ss_pred EEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecC---CCcEEEeccccchh
Q 039720 752 AIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDH---DMVAHVSDFGLARF 828 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~---~~~~kl~Dfg~a~~ 828 (973)
++||||+++|+|.+++...+...+.+++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++.
T Consensus 124 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~ 200 (349)
T 2w4o_A 124 SLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKI 200 (349)
T ss_dssp EEEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC----
T ss_pred EEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccc
Confidence 99999999999999998887788899999999999999999999 9999999999999975 88999999999986
Q ss_pred ccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCcc
Q 039720 829 LSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKK 908 (973)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 908 (973)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..................
T Consensus 201 ~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~--- 268 (349)
T 2w4o_A 201 VEHQ---------VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEY--- 268 (349)
T ss_dssp ---------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCC---
T ss_pred cCcc---------cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCC---
Confidence 5431 1223456899999999999999999999999999999999999999754332211111111000
Q ss_pred cccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 909 VMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
... .......+..+.+++.+||+.||++|||++|+++.
T Consensus 269 -------~~~-----~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 269 -------YFI-----SPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp -------CCC-----TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -------ccC-----CchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 01112334567789999999999999999999874
No 83
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=4.1e-39 Score=354.64 Aligned_cols=247 Identities=25% Similarity=0.313 Sum_probs=204.9
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCc
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK---KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGAD 749 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 749 (973)
.++|++.+.||+|+||+||+|++..+|+.||+|+++... ....+.+.+|+.+++.++||||+++++++.. ..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~-----~~ 79 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD-----AQ 79 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEEC-----SS
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEe-----CC
Confidence 367999999999999999999999999999999997542 2345678899999999999999999998653 47
Q ss_pred eEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhc
Q 039720 750 FKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 829 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~ 829 (973)
..++||||+++|+|.+++.....+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 80 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~ 156 (318)
T 1fot_A 80 QIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYV 156 (318)
T ss_dssp EEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEEC
T ss_pred EEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceec
Confidence 8999999999999999999888888889999999999999999999 9999999999999999999999999999865
Q ss_pred cCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCccc
Q 039720 830 SHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKV 909 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
.. ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..+......
T Consensus 157 ~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----~~~~~i~~~--- 218 (318)
T 1fot_A 157 PD-----------VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM----KTYEKILNA--- 218 (318)
T ss_dssp SS-----------CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH----HHHHHHHHC---
T ss_pred CC-----------ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH----HHHHHHHhC---
Confidence 32 123457999999999999999999999999999999999999999754221 111111100
Q ss_pred ccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHHH
Q 039720 910 MGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERM-----QMTAVVKK 958 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 958 (973)
.. ..+ ......+.+++.+|++.||++|| +++|++++
T Consensus 219 ------~~----~~p---~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 219 ------EL----RFP---PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp ------CC----CCC---TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred ------CC----CCC---CCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 00 001 12234567888899999999999 89998854
No 84
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=3.5e-39 Score=361.19 Aligned_cols=253 Identities=20% Similarity=0.283 Sum_probs=202.3
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc-----chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCC
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK-----KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKG 747 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 747 (973)
.++|++.+.||+|+||+||+|+++.+++.||||++.... ....+.+.+|+.+++.++||||+++++++..
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~----- 97 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSS----- 97 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEe-----
Confidence 357999999999999999999999999999999996432 1235778999999999999999999998765
Q ss_pred CceEEEEEeeccCCCHHHHhhhcC----CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCc---EEE
Q 039720 748 ADFKAIVYEYMQYGSVDDWLHHTN----DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMV---AHV 820 (973)
Q Consensus 748 ~~~~~lv~e~~~~gsL~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~---~kl 820 (973)
....++||||+++|+|.+.+.... ...+..++.++.||+.||+|||++ +|+||||||+||+++.++. +||
T Consensus 98 ~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl 174 (351)
T 3c0i_A 98 DGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKL 174 (351)
T ss_dssp TTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEE
T ss_pred CCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEE
Confidence 478999999999999998876432 357788899999999999999999 9999999999999987654 999
Q ss_pred eccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhh
Q 039720 821 SDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGY 900 (973)
Q Consensus 821 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~ 900 (973)
+|||+++...... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||..... ......
T Consensus 175 ~Dfg~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~i 244 (351)
T 3c0i_A 175 GGFGVAIQLGESG--------LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--RLFEGI 244 (351)
T ss_dssp CCCTTCEECCTTS--------CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH--HHHHHH
T ss_pred ecCcceeEecCCC--------eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH--HHHHHH
Confidence 9999998764321 122345699999999999999999999999999999999999999975321 001010
Q ss_pred hhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 901 AKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
..... ... +......+..+.+++.+||+.||++|||+.|++++
T Consensus 245 ~~~~~------~~~---------~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 245 IKGKY------KMN---------PRQWSHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp HHTCC------CCC---------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HcCCC------CCC---------ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00000 000 01112334567889999999999999999999863
No 85
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=8.7e-39 Score=363.88 Aligned_cols=276 Identities=17% Similarity=0.194 Sum_probs=206.8
Q ss_pred hhcCCcCCccccc--cceeEEEEEECCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCC
Q 039720 673 TKEFSSSNRIGKG--SFGFVYKGNLGEDGMSVAVKVMNLDK--KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGA 748 (973)
Q Consensus 673 ~~~y~~~~~lg~G--~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 748 (973)
.++|++.+.||+| +||+||+|++..+|+.||||+++... ....+.+.+|+.+++.++||||+++++++.. .
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~ 98 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIA-----D 98 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----T
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEE-----C
Confidence 4689999999999 99999999999999999999997553 3345678889999999999999999999765 4
Q ss_pred ceEEEEEeeccCCCHHHHhhhc--CCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccc
Q 039720 749 DFKAIVYEYMQYGSVDDWLHHT--NDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 826 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a 826 (973)
...++||||+++|+|.+++... ....+..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||.+
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~ 175 (389)
T 3gni_B 99 NELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSN 175 (389)
T ss_dssp TEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGC
T ss_pred CEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccc
Confidence 7899999999999999999765 5677888999999999999999999 9999999999999999999999999998
Q ss_pred hhccCCCCccCCCCCcccccccccccccCcccccC--CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHh
Q 039720 827 RFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMG--GDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMA 904 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~ 904 (973)
.......... ...........||+.|+|||++.+ ..++.++|||||||++|||++|+.||............... .
T Consensus 176 ~~~~~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~-~ 253 (389)
T 3gni_B 176 LSMISHGQRQ-RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNG-T 253 (389)
T ss_dssp EECEETTEEC-SCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-----
T ss_pred eeeccccccc-cccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcC-C
Confidence 7543221100 011112233468999999999887 67899999999999999999999999865443222111111 0
Q ss_pred cCccc-----------------------ccccCc----ccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 039720 905 LPKKV-----------------------MGIVDP----SLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVK 957 (973)
Q Consensus 905 ~~~~~-----------------------~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 957 (973)
.+... .+.... ..................+.+++.+||+.||++|||++|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~ 333 (389)
T 3gni_B 254 VPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333 (389)
T ss_dssp ----------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 00000 000000 000000001122334567889999999999999999999986
Q ss_pred H
Q 039720 958 K 958 (973)
Q Consensus 958 ~ 958 (973)
.
T Consensus 334 h 334 (389)
T 3gni_B 334 H 334 (389)
T ss_dssp S
T ss_pred C
Confidence 5
No 86
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=2.1e-39 Score=361.55 Aligned_cols=285 Identities=24% Similarity=0.326 Sum_probs=205.3
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHH--HHhcCCCCceeEEeEeeecccCCCce
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEA--LRNIRHRNLIKIITICSSIDFKGADF 750 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~--l~~l~h~niv~~~~~~~~~~~~~~~~ 750 (973)
.++|++.+.||+|+||+||+|++ +++.||||++.... ...+..|.++ +..++||||+++++++......+...
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred hHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 46899999999999999999988 78999999997443 2334444444 45689999999998776655566677
Q ss_pred EEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcC------CCCeEecCCCCCcEEecCCCcEEEeccc
Q 039720 751 KAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHC------QPPIVHGDLKPSNVLLDHDMVAHVSDFG 824 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~------~~~ivHrDik~~NILl~~~~~~kl~Dfg 824 (973)
.++||||+++|+|.+++.... .....++.++.|++.||+|||+.+ .++|+||||||+|||++.++.+||+|||
T Consensus 87 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG 165 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSLHT-SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFG 165 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHCC-BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCT
T ss_pred EEEEEecCCCCcHHHHHhhcc-cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeecc
Confidence 899999999999999997654 366778899999999999999762 2389999999999999999999999999
Q ss_pred cchhccCCCCccCCCCCcccccccccccccCcccccC-------CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccH
Q 039720 825 LARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMG-------GDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTL 897 (973)
Q Consensus 825 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~ 897 (973)
+++.+...................||+.|+|||++.+ ..++.++|||||||++|||++|+.||..........
T Consensus 166 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~ 245 (336)
T 3g2f_A 166 LSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQ 245 (336)
T ss_dssp TCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCC
T ss_pred ceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHH
Confidence 9987654322111122223334579999999999887 456778999999999999999977764332211111
Q ss_pred hhhhhHhcCcc----cc-----cccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccccc
Q 039720 898 HGYAKMALPKK----VM-----GIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEIF 966 (973)
Q Consensus 898 ~~~~~~~~~~~----~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 966 (973)
..+........ .. ....+.+... ......++..+.+++.+||+.||++|||++|+++.|+++.+.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~ 320 (336)
T 3g2f_A 246 MAFQTEVGNHPTFEDMQVLVSREKQRPKFPEA---WKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIW 320 (336)
T ss_dssp CTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTT---CCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCC
T ss_pred HhhhcccCCCchHHHHHhhhcccccCCCCCcc---cccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHH
Confidence 11110000000 00 0001111100 1122346678999999999999999999999999999986544
No 87
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=8.8e-39 Score=356.26 Aligned_cols=255 Identities=22% Similarity=0.264 Sum_probs=204.1
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc---chhHHHHHHHHHHHHhc-CCCCceeEEeEeeecccCCC
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK---KGATKSFVAECEALRNI-RHRNLIKIITICSSIDFKGA 748 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~ 748 (973)
.++|++.+.||+|+||+||+|+++.+++.||+|+++... ....+.+.+|..+++++ +||||+++++++.. .
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~-----~ 82 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT-----E 82 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----S
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEe-----C
Confidence 357999999999999999999999999999999997542 33456688999999988 89999999998643 4
Q ss_pred ceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchh
Q 039720 749 DFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 828 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~ 828 (973)
...++||||+++|+|.+++...+.+++..++.++.||+.||+|||++ +|+||||||+||+++.++++||+|||+++.
T Consensus 83 ~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~ 159 (345)
T 3a8x_A 83 SRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 159 (345)
T ss_dssp SEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBC
T ss_pred CEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEecccccc
Confidence 78999999999999999999888888899999999999999999999 999999999999999999999999999985
Q ss_pred ccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCc----cHhhhhhHh
Q 039720 829 LSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGL----TLHGYAKMA 904 (973)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~----~~~~~~~~~ 904 (973)
.... .......+||+.|+|||++.+..++.++||||+||++|||++|+.||........ .........
T Consensus 160 ~~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i 231 (345)
T 3a8x_A 160 GLRP--------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 231 (345)
T ss_dssp SCCT--------TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHH
T ss_pred ccCC--------CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHH
Confidence 3221 2233456799999999999999999999999999999999999999975322110 000000000
Q ss_pred cCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCH------HHHHHH
Q 039720 905 LPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQM------TAVVKK 958 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~~ 958 (973)
. ... ...+......+.+++.+||+.||++||++ +|++++
T Consensus 232 ~--------~~~-------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 232 L--------EKQ-------IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp H--------HCC-------CCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred H--------cCC-------CCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 0 000 00112234456788899999999999996 566653
No 88
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=6.6e-40 Score=370.85 Aligned_cols=260 Identities=27% Similarity=0.390 Sum_probs=208.8
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK-KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFK 751 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 751 (973)
.++|.+.+.||+|+||+||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++.. ....
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~~~~ 187 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ-----KQPI 187 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECS-----SSSC
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEec-----CCCc
Confidence 467999999999999999999999899999999997543 2334568899999999999999999999754 3678
Q ss_pred EEEEeeccCCCHHHHhhhcC-CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhcc
Q 039720 752 AIVYEYMQYGSVDDWLHHTN-DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLS 830 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~ 830 (973)
++||||+++|+|.+++...+ ......+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 188 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~ 264 (377)
T 3cbl_A 188 YIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEA 264 (377)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECT
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecC
Confidence 99999999999999998654 466788899999999999999999 99999999999999999999999999998643
Q ss_pred CCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCccHhhhhhHhcCccc
Q 039720 831 HHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHGYAKMALPKKV 909 (973)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
.... ........+++.|+|||++.+..++.++|||||||++|||++ |+.||....... ........
T Consensus 265 ~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~--~~~~~~~~----- 331 (377)
T 3cbl_A 265 DGVY------AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ--TREFVEKG----- 331 (377)
T ss_dssp TSEE------ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH--HHHHHHTT-----
T ss_pred CCce------eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcC-----
Confidence 2110 011112235778999999998899999999999999999999 999997653221 11111100
Q ss_pred ccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhcccc
Q 039720 910 MGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEI 965 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 965 (973)
.....+..++..+.+++.+||+.||++|||++|+++.|+++.+.
T Consensus 332 ------------~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 332 ------------GRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp ------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ------------CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 00111223455678999999999999999999999999988653
No 89
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=3.1e-39 Score=360.41 Aligned_cols=250 Identities=22% Similarity=0.249 Sum_probs=204.4
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc---chhHHHHHHHHHHHHhc-CCCCceeEEeEeeecccCCC
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK---KGATKSFVAECEALRNI-RHRNLIKIITICSSIDFKGA 748 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~ 748 (973)
.++|++.+.||+|+||+||+|+++.+++.||||+++... ....+.+..|..++..+ +||+|+++++++. +.
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~-----~~ 93 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ-----TM 93 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEE-----CS
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEE-----cC
Confidence 468999999999999999999999999999999997542 23456788999999887 7999999999854 35
Q ss_pred ceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchh
Q 039720 749 DFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 828 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~ 828 (973)
+..++||||+++|+|.+++...+.+.+..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.
T Consensus 94 ~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~ 170 (353)
T 2i0e_A 94 DRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 170 (353)
T ss_dssp SEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred CEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccc
Confidence 78999999999999999999888888899999999999999999999 999999999999999999999999999985
Q ss_pred ccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCcc
Q 039720 829 LSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKK 908 (973)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 908 (973)
.... .......+||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+.. .... .
T Consensus 171 ~~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--~~~~--~i~~-~- 236 (353)
T 2i0e_A 171 NIWD--------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--ELFQ--SIME-H- 236 (353)
T ss_dssp CCCT--------TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHH--HHHH-C-
T ss_pred cccC--------CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH--HHHH--HHHh-C-
Confidence 3221 22334567999999999999999999999999999999999999999754221 1111 1100 0
Q ss_pred cccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCC-----HHHHHHH
Q 039720 909 VMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQ-----MTAVVKK 958 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 958 (973)
. ...+......+.+++.+||+.||++||+ ++|++++
T Consensus 237 -------~-------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 237 -------N-------VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp -------C-------CCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred -------C-------CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 0 0011123456778899999999999995 5777654
No 90
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.8e-39 Score=361.03 Aligned_cols=251 Identities=22% Similarity=0.299 Sum_probs=204.3
Q ss_pred HHhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc---chhHHHHHHHHHHHHhc-CCCCceeEEeEeeecccC
Q 039720 671 KATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK---KGATKSFVAECEALRNI-RHRNLIKIITICSSIDFK 746 (973)
Q Consensus 671 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 746 (973)
...++|.+.+.||+|+||+||+|+++.+|+.||||+++... ....+.+..|..+++.+ +||||+++++++..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~---- 89 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQT---- 89 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEEC----
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEe----
Confidence 34578999999999999999999999999999999997542 23456688899999877 89999999998643
Q ss_pred CCceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccc
Q 039720 747 GADFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 826 (973)
Q Consensus 747 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a 826 (973)
....++||||+++|+|.+++.....+.+..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+|
T Consensus 90 -~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a 165 (345)
T 1xjd_A 90 -KENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMC 165 (345)
T ss_dssp -SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred -CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhh
Confidence 578999999999999999999888888899999999999999999999 9999999999999999999999999999
Q ss_pred hhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcC
Q 039720 827 RFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALP 906 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 906 (973)
+..... .......+||+.|+|||++.+..++.++||||+||++|||++|+.||...... .+.. .....
T Consensus 166 ~~~~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~--~i~~~ 233 (345)
T 1xjd_A 166 KENMLG--------DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE--ELFH--SIRMD 233 (345)
T ss_dssp BCCCCT--------TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHH--HHHHC
T ss_pred hhcccC--------CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH--HHHH--HHHhC
Confidence 754321 22234567999999999999999999999999999999999999999754221 1111 11100
Q ss_pred cccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHH-HHHH
Q 039720 907 KKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMT-AVVK 957 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl~ 957 (973)
.. ..+......+.+++.+||+.||++||++. |+++
T Consensus 234 -------~~---------~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 234 -------NP---------FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp -------CC---------CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred -------CC---------CCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence 00 01112334567888999999999999997 6653
No 91
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=351.28 Aligned_cols=273 Identities=23% Similarity=0.311 Sum_probs=203.6
Q ss_pred HhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccc-----hhHHHHHHHHHHHHhc---CCCCceeEEeEeeec
Q 039720 672 ATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKK-----GATKSFVAECEALRNI---RHRNLIKIITICSSI 743 (973)
Q Consensus 672 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~ 743 (973)
..++|++.+.||+|+||+||+|++..+++.||||+++.... .....+.+|+.+++.+ +||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 35799999999999999999999999999999999974331 1234566777776666 599999999998765
Q ss_pred ccCCCceEEEEEeeccCCCHHHHhhhcCC--CchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEe
Q 039720 744 DFKGADFKAIVYEYMQYGSVDDWLHHTND--KLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVS 821 (973)
Q Consensus 744 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~ 821 (973)
........++||||+. |+|.+++..... +++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEe
Confidence 3333446899999997 599999987654 67888999999999999999999 99999999999999999999999
Q ss_pred ccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhh
Q 039720 822 DFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYA 901 (973)
Q Consensus 822 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~ 901 (973)
|||+++.... ........||+.|+|||++.+..++.++|||||||++|+|++|+.||........ +....
T Consensus 163 Dfg~a~~~~~---------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~~~i~ 232 (308)
T 3g33_A 163 DFGLARIYSY---------QMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ-LGKIF 232 (308)
T ss_dssp SCSCTTTSTT---------CCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHH-HHHHH
T ss_pred eCccccccCC---------CcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHH
Confidence 9999986543 2223456789999999999999999999999999999999999999976433211 11111
Q ss_pred hHh-cCc--ccccc---cCcccccccCC--CchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 902 KMA-LPK--KVMGI---VDPSLLMEARG--PSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 902 ~~~-~~~--~~~~~---~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
... .+. ..... ....+...... .....+....+.+++.+||+.||++|||++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 233 DLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp HHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 111 000 00000 00000000000 01112344667889999999999999999999864
No 92
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.8e-39 Score=348.35 Aligned_cols=256 Identities=25% Similarity=0.415 Sum_probs=206.6
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceEE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFKA 752 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 752 (973)
.++|++.+.||+|+||+||+|++. +++.||+|++..... ..+.+.+|++++++++||||+++++++.+ ....+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 81 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLE-----QAPIC 81 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECS-----SSSEE
T ss_pred hhhceeeheecCCCccEEEEEEec-CCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEec-----CCceE
Confidence 368999999999999999999996 688899999975443 34678999999999999999999998654 46789
Q ss_pred EEEeeccCCCHHHHhhhcC-CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhccC
Q 039720 753 IVYEYMQYGSVDDWLHHTN-DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLSH 831 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~~ 831 (973)
+||||+++++|.+++.... ..++..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 158 (269)
T 4hcu_A 82 LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 158 (269)
T ss_dssp EEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred EEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccc
Confidence 9999999999999997543 467788899999999999999999 999999999999999999999999999986543
Q ss_pred CCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCccHhhhhhHhcCcccc
Q 039720 832 HPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHGYAKMALPKKVM 910 (973)
Q Consensus 832 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
.. ........+|+.|+|||++.+..++.++||||+|+++|+|++ |+.||....... ........
T Consensus 159 ~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~--~~~~~~~~------ 223 (269)
T 4hcu_A 159 DQ-------YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE--VVEDISTG------ 223 (269)
T ss_dssp HH-------HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHHHTT------
T ss_pred cc-------cccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH--HHHHHhcC------
Confidence 21 112223446778999999998999999999999999999999 999997543211 11110000
Q ss_pred cccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccc
Q 039720 911 GIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGE 964 (973)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 964 (973)
.. ...+...+..+.+++.+||+.||++||+++|+++.|+++.+
T Consensus 224 --~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 224 --FR---------LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp --CC---------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --cc---------CCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 00 01111224567789999999999999999999999998854
No 93
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1e-38 Score=360.57 Aligned_cols=253 Identities=17% Similarity=0.234 Sum_probs=206.8
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceEE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFKA 752 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 752 (973)
.++|++.+.||+|+||+||+|++..+|+.||+|++..........+.+|+++++.++||||+++++++.. ....+
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-----~~~~~ 124 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFED-----KYEMV 124 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEEC-----SSEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEe-----CCEEE
Confidence 4689999999999999999999999999999999986655566788999999999999999999998654 47899
Q ss_pred EEEeeccCCCHHHHhhhcC-CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecC--CCcEEEeccccchhc
Q 039720 753 IVYEYMQYGSVDDWLHHTN-DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDH--DMVAHVSDFGLARFL 829 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~--~~~~kl~Dfg~a~~~ 829 (973)
+||||+.+|+|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++. ++.+||+|||+++..
T Consensus 125 lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~ 201 (387)
T 1kob_A 125 LILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKL 201 (387)
T ss_dssp EEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred EEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceec
Confidence 9999999999999997654 577888999999999999999999 9999999999999974 578999999999865
Q ss_pred cCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCccc
Q 039720 830 SHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKV 909 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...........
T Consensus 202 ~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~----~~~~~i~~~~~- 267 (387)
T 1kob_A 202 NPD---------EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL----ETLQNVKRCDW- 267 (387)
T ss_dssp CTT---------SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH----HHHHHHHHCCC-
T ss_pred CCC---------cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH----HHHHHHHhCCC-
Confidence 432 2223456999999999999999999999999999999999999999754221 11111110000
Q ss_pred ccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 910 MGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
..+ .......+..+.+++.+||+.||++|||++|+++.
T Consensus 268 --~~~---------~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 268 --EFD---------EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp --CCC---------SSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred --CCC---------ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 000 11112334567789999999999999999999875
No 94
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=2.4e-39 Score=365.18 Aligned_cols=260 Identities=26% Similarity=0.411 Sum_probs=197.2
Q ss_pred hhcCCcCCccccccceeEEEEEEC---CCCcEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCC
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLG---EDGMSVAVKVMNLDK-KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGA 748 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 748 (973)
.++|.+.+.||+|+||+||+|++. .++..||||+++... ....+.+.+|+.++++++||||+++++++.. .
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~ 118 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK-----S 118 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-----S
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee-----C
Confidence 358999999999999999999986 467789999997543 3345679999999999999999999999654 4
Q ss_pred ceEEEEEeeccCCCHHHHhhhcC-CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccch
Q 039720 749 DFKAIVYEYMQYGSVDDWLHHTN-DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 827 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~ 827 (973)
...++||||+++|+|.++++... ...+.+++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 195 (373)
T 2qol_A 119 KPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGR 195 (373)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC----
T ss_pred CceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCcccc
Confidence 67899999999999999998654 567788899999999999999999 99999999999999999999999999998
Q ss_pred hccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCccHhhhhhHhcC
Q 039720 828 FLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHGYAKMALP 906 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~ 906 (973)
....... .........+++.|+|||++.+..++.++|||||||++|||++ |+.||...... .+......
T Consensus 196 ~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~--~~~~~i~~--- 265 (373)
T 2qol_A 196 VLEDDPE-----AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--DVIKAVDE--- 265 (373)
T ss_dssp -----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH--HHHHHHHT---
T ss_pred ccccCCc-----cceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHc---
Confidence 7643210 0111122345778999999999999999999999999999998 99999754321 11111000
Q ss_pred cccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccc
Q 039720 907 KKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGE 964 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 964 (973)
... ...+..++..+.+++.+||+.||++||+++||++.|+++..
T Consensus 266 ---------~~~-----~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~ 309 (373)
T 2qol_A 266 ---------GYR-----LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309 (373)
T ss_dssp ---------TEE-----CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---------CCC-----CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence 000 11112345678899999999999999999999999998853
No 95
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=9.8e-39 Score=350.90 Aligned_cols=258 Identities=27% Similarity=0.449 Sum_probs=200.7
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceEE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFKA 752 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 752 (973)
.++|++.+.||+|+||+||+|++ .++.||||++... ...+.+.+|++++++++||||+++++++. +..+
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-------~~~~ 75 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKW--RAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL-------NPVC 75 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEE--TTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT-------TTTE
T ss_pred HhHeeeeeEeecCCCceEEEEEE--CCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc-------CCcE
Confidence 35799999999999999999998 5789999998633 34677899999999999999999999754 3478
Q ss_pred EEEeeccCCCHHHHhhhcCC---CchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCc-EEEeccccchh
Q 039720 753 IVYEYMQYGSVDDWLHHTND---KLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMV-AHVSDFGLARF 828 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~~~---~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~-~kl~Dfg~a~~ 828 (973)
+||||+++|+|.+++..... .....++.++.|+++||+|||+....+|+||||||+||+++.++. +||+|||++..
T Consensus 76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~ 155 (307)
T 2eva_A 76 LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD 155 (307)
T ss_dssp EEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---
T ss_pred EEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccc
Confidence 99999999999999986553 345778899999999999999932129999999999999998886 79999999975
Q ss_pred ccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCcc
Q 039720 829 LSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKK 908 (973)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 908 (973)
.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.................
T Consensus 156 ~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~---- 220 (307)
T 2eva_A 156 IQTH-----------MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNG---- 220 (307)
T ss_dssp --------------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTT----
T ss_pred cccc-----------cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcC----
Confidence 4321 1234589999999999999999999999999999999999999976543321111110000
Q ss_pred cccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccccccCC
Q 039720 909 VMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEIFIGP 969 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 969 (973)
. .+.....++..+.+++.+||+.||++|||++|+++.|+++...+.++
T Consensus 221 ----~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~ 268 (307)
T 2eva_A 221 ----T---------RPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGA 268 (307)
T ss_dssp ----C---------CCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCT
T ss_pred ----C---------CCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCC
Confidence 0 01111233456778999999999999999999999999997766543
No 96
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1e-38 Score=347.45 Aligned_cols=253 Identities=27% Similarity=0.419 Sum_probs=202.5
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchh-------HHHHHHHHHHHHhcCCCCceeEEeEeeeccc
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGA-------TKSFVAECEALRNIRHRNLIKIITICSSIDF 745 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-------~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 745 (973)
.++|++.+.||+|+||+||+|++..+++.||+|++....... .+.+.+|+++++.++||||+++++++..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--- 94 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN--- 94 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETT---
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecC---
Confidence 368999999999999999999999999999999996543211 1678999999999999999999998643
Q ss_pred CCCceEEEEEeeccCCCHHHHhhhcC-CCchhhHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCcEEecCCCc-----
Q 039720 746 KGADFKAIVYEYMQYGSVDDWLHHTN-DKLEVGKLNIVIEVASVIEYLHNHCQPP--IVHGDLKPSNVLLDHDMV----- 817 (973)
Q Consensus 746 ~~~~~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~--ivHrDik~~NILl~~~~~----- 817 (973)
..++||||+++|+|.+++.... ...+..++.++.|++.|++|||+. + |+||||||+||+++.++.
T Consensus 95 ----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~ 167 (287)
T 4f0f_A 95 ----PPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVC 167 (287)
T ss_dssp ----TTEEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCC
T ss_pred ----CCeEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCcee
Confidence 2269999999999998886543 567788899999999999999999 8 999999999999988776
Q ss_pred EEEeccccchhccCCCCccCCCCCcccccccccccccCcccc--cCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCc
Q 039720 818 AHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYG--MGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGL 895 (973)
Q Consensus 818 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~ 895 (973)
+||+|||+++.... ......||+.|+|||++ ....++.++||||+||++|||++|+.||........
T Consensus 168 ~kl~Dfg~~~~~~~-----------~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~ 236 (287)
T 4f0f_A 168 AKVADFGLSQQSVH-----------SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI 236 (287)
T ss_dssp EEECCCTTCBCCSS-----------CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHH
T ss_pred EEeCCCCccccccc-----------cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHH
Confidence 99999999974322 23345689999999998 445678999999999999999999999986544322
Q ss_pred cHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhc
Q 039720 896 TLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAV 962 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 962 (973)
.......... .. +..+..++..+.+++.+||+.||++||+++|+++.|+++
T Consensus 237 ~~~~~~~~~~-------~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 237 KFINMIREEG-------LR---------PTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HHHHHHHHSC-------CC---------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred HHHHHHhccC-------CC---------CCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 2111111100 00 111223455678999999999999999999999999864
No 97
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=6.1e-39 Score=358.05 Aligned_cols=247 Identities=21% Similarity=0.246 Sum_probs=205.8
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCc
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK---KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGAD 749 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 749 (973)
.++|++.+.||+|+||+||+|++..+|+.||+|+++... ....+.+.+|+.+++.++||||+++++++.. ..
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~ 114 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD-----NS 114 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----SS
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc-----CC
Confidence 468999999999999999999999999999999997542 2345678899999999999999999998653 47
Q ss_pred eEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhc
Q 039720 750 FKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 829 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~ 829 (973)
..++||||+++|+|.+++...+.+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 115 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~ 191 (350)
T 1rdq_E 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191 (350)
T ss_dssp EEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceec
Confidence 8999999999999999999888888899999999999999999999 9999999999999999999999999999865
Q ss_pred cCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCccc
Q 039720 830 SHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKV 909 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+ +......
T Consensus 192 ~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~--~~~i~~~--- 253 (350)
T 1rdq_E 192 KG-----------RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI--QI--YEKIVSG--- 253 (350)
T ss_dssp SS-----------CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HH--HHHHHHC---
T ss_pred cC-----------CcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH--HH--HHHHHcC---
Confidence 32 123457999999999999999999999999999999999999999754221 11 1111100
Q ss_pred ccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCC-----HHHHHHH
Q 039720 910 MGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQ-----MTAVVKK 958 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 958 (973)
. ...+......+.+++.+||+.||++||+ ++|++++
T Consensus 254 ------~-------~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 254 ------K-------VRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp ------C-------CCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred ------C-------CCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 0 0011123456778999999999999998 8888764
No 98
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=4.5e-39 Score=356.98 Aligned_cols=258 Identities=22% Similarity=0.379 Sum_probs=200.1
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEE----EEEEeeccc-chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCC
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSV----AVKVMNLDK-KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKG 747 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~v----avK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 747 (973)
.++|++.+.||+|+||+||+|++..+++.| |+|.++... ....+.+.+|+.++++++||||++++++|..
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----- 88 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT----- 88 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEES-----
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec-----
Confidence 357999999999999999999998777654 777765332 3345789999999999999999999999764
Q ss_pred CceEEEEEeeccCCCHHHHhhhc-CCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccc
Q 039720 748 ADFKAIVYEYMQYGSVDDWLHHT-NDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 826 (973)
Q Consensus 748 ~~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a 826 (973)
...++|+||+.+|+|.+++... ....+..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|
T Consensus 89 -~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a 164 (327)
T 3poz_A 89 -STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA 164 (327)
T ss_dssp -SSEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHH
T ss_pred -CCeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcce
Confidence 3478999999999999999874 4567788899999999999999999 9999999999999999999999999999
Q ss_pred hhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCccHhhhhhHhc
Q 039720 827 RFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHGYAKMAL 905 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~~~~~~~~~~~~~~ 905 (973)
+...... .........+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... +........
T Consensus 165 ~~~~~~~------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~~~~~~ 236 (327)
T 3poz_A 165 KLLGAEE------KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSILEKGE 236 (327)
T ss_dssp HHHTTTC------C-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHHTTC
T ss_pred eEccCCc------ccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH--HHHHHHcCC
Confidence 8765432 1222233456889999999999999999999999999999999 999997643321 111111000
Q ss_pred CcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccc
Q 039720 906 PKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGE 964 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 964 (973)
....+..+...+.+++.+||+.||++||++.|+++.|+++..
T Consensus 237 -----------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 237 -----------------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp -----------------CCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred -----------------CCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 011112334567889999999999999999999999988753
No 99
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.2e-38 Score=357.89 Aligned_cols=255 Identities=22% Similarity=0.255 Sum_probs=196.1
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceEE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFKA 752 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 752 (973)
.++|++.+.||+|+||+||+|++..+++.||||++..... ..+.+.+|+.+++.++||||+++++++.. ....+
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~~~~~ 92 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILT-----PTHLA 92 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SSEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEee-----CCEEE
Confidence 4689999999999999999999999999999999975432 34668899999999999999999998654 47899
Q ss_pred EEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCc--EEEeccccchhcc
Q 039720 753 IVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMV--AHVSDFGLARFLS 830 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~--~kl~Dfg~a~~~~ 830 (973)
+||||+++|+|.+++...+.+++..++.++.|++.||+|||++ +|+||||||+||+++.++. +||+|||+++...
T Consensus 93 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~ 169 (361)
T 3uc3_A 93 IIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 169 (361)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC----
T ss_pred EEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccccc
Confidence 9999999999999998888888999999999999999999999 9999999999999987765 9999999997432
Q ss_pred CCCCccCCCCCcccccccccccccCcccccCCCCCcc-cchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCccc
Q 039720 831 HHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMT-GDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKV 909 (973)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
. ........||+.|+|||++.+..++.+ +||||+||++|+|++|+.||............. .......
T Consensus 170 ~---------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~-~~~~~~~- 238 (361)
T 3uc3_A 170 L---------HSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTI-QRILSVK- 238 (361)
T ss_dssp --------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHH-HHHHTTC-
T ss_pred c---------cCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHH-HHHhcCC-
Confidence 2 122234569999999999988887655 899999999999999999998654432211111 1111000
Q ss_pred ccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 039720 910 MGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKL 959 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 959 (973)
... + ........+.+++.+||+.||++|||++|++++-
T Consensus 239 -----~~~------~-~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp 276 (361)
T 3uc3_A 239 -----YSI------P-DDIRISPECCHLISRIFVADPATRISIPEIKTHS 276 (361)
T ss_dssp -----CCC------C-TTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSH
T ss_pred -----CCC------C-CcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCc
Confidence 000 0 0011234567899999999999999999999763
No 100
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.8e-39 Score=357.69 Aligned_cols=265 Identities=21% Similarity=0.346 Sum_probs=200.9
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCc
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK---KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGAD 749 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 749 (973)
.++|++.+.||+|+||+||+|++..+++.||||+++... ......+.+|+.+++.++||||+++++++... .....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~~~~~ 89 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAE-TPAGP 89 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEE-ETTEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeecc-CCCCc
Confidence 468999999999999999999999999999999997543 23346788999999999999999999987653 22234
Q ss_pred eEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhc
Q 039720 750 FKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 829 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~ 829 (973)
..++||||+++++|.++++..+...+..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred ccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 5699999999999999999888888899999999999999999999 9999999999999999999999999999866
Q ss_pred cCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCccc
Q 039720 830 SHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKV 909 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
.... ..........||+.|+|||++.+..++.++|||||||++|||++|+.||......... +.... ..
T Consensus 167 ~~~~-----~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~---~~~~~-~~-- 235 (311)
T 3ork_A 167 ADSG-----NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVA---YQHVR-ED-- 235 (311)
T ss_dssp --------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HHHHH-CC--
T ss_pred cccc-----cccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH---HHHhc-CC--
Confidence 4321 1112223456899999999999999999999999999999999999999754321110 00000 00
Q ss_pred ccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHH-HHHHHHhc
Q 039720 910 MGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTA-VVKKLCAV 962 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e-vl~~L~~~ 962 (973)
...+ .......+..+.+++.+||+.||++||++.+ +.+.+.++
T Consensus 236 --~~~~--------~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 236 --PIPP--------SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp --CCCH--------HHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred --CCCc--------ccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 0000 0001123456788999999999999996555 55556555
No 101
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=2.3e-39 Score=352.98 Aligned_cols=258 Identities=20% Similarity=0.359 Sum_probs=202.9
Q ss_pred hhcCCcCCccccccceeEEEEEECCCC-------cEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeeccc
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDG-------MSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDF 745 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~-------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 745 (973)
.++|.+.+.||+|+||+||+|++..++ ..||+|++........+.+.+|+.+++.++||||+++++++..
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--- 83 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC--- 83 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECC---
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe---
Confidence 468999999999999999999998776 4799999977666677889999999999999999999998654
Q ss_pred CCCceEEEEEeeccCCCHHHHhhhcCC-CchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCc-------
Q 039720 746 KGADFKAIVYEYMQYGSVDDWLHHTND-KLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMV------- 817 (973)
Q Consensus 746 ~~~~~~~lv~e~~~~gsL~~~l~~~~~-~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~------- 817 (973)
....++||||+++|+|.+++..... .++..++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 84 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~ 158 (289)
T 4fvq_A 84 --GDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPP 158 (289)
T ss_dssp --TTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCC
T ss_pred --CCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccc
Confidence 4678999999999999999987654 67788899999999999999999 9999999999999998887
Q ss_pred -EEEeccccchhccCCCCccCCCCCcccccccccccccCcccccC-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCc
Q 039720 818 -AHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMG-GDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGL 895 (973)
Q Consensus 818 -~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~ 895 (973)
+||+|||.+..... .....||+.|+|||++.+ ..++.++|||||||++|||++|..|+........
T Consensus 159 ~~kl~Dfg~~~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~ 226 (289)
T 4fvq_A 159 FIKLSDPGISITVLP------------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR 226 (289)
T ss_dssp EEEECCCCSCTTTSC------------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH
T ss_pred eeeeccCcccccccC------------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHH
Confidence 99999999875422 123468899999999887 6789999999999999999995554432222111
Q ss_pred cHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccccccCCC
Q 039720 896 TLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEIFIGPP 970 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 970 (973)
.. ..... . .... ......+.+++.+||+.||++|||++|+++.|+++-..-.+||
T Consensus 227 ~~-~~~~~--~--------~~~~---------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~~~ 281 (289)
T 4fvq_A 227 KL-QFYED--R--------HQLP---------APKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPR 281 (289)
T ss_dssp HH-HHHHT--T--------CCCC---------CCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-------
T ss_pred HH-HHhhc--c--------CCCC---------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCCCC
Confidence 10 00000 0 0000 0112346688899999999999999999999999976555544
No 102
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=8e-39 Score=360.60 Aligned_cols=279 Identities=16% Similarity=0.226 Sum_probs=209.6
Q ss_pred hhcCCcCCccccccceeEEEEEECCC-----CcEEEEEEeecccchh-----------HHHHHHHHHHHHhcCCCCceeE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGED-----GMSVAVKVMNLDKKGA-----------TKSFVAECEALRNIRHRNLIKI 736 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vavK~~~~~~~~~-----------~~~~~~e~~~l~~l~h~niv~~ 736 (973)
.++|++.+.||+|+||+||+|++..+ ++.||||++....... ...+..|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 45899999999999999999999754 5889999987553211 1234456667778889999999
Q ss_pred EeEeeecccCCCceEEEEEeeccCCCHHHHhhhc-CCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEec--
Q 039720 737 ITICSSIDFKGADFKAIVYEYMQYGSVDDWLHHT-NDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLD-- 813 (973)
Q Consensus 737 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~-- 813 (973)
++++... ..+....++||||+ +++|.+++... ..+++..++.++.||+.||+|||+. +|+||||||+|||++
T Consensus 114 ~~~~~~~-~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 114 WGSGLHD-KNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEEEE-ETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESS
T ss_pred Eeeeeec-cCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecC
Confidence 9998653 33346689999999 99999999875 5677888999999999999999999 999999999999999
Q ss_pred CCCcEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCC
Q 039720 814 HDMVAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFND 893 (973)
Q Consensus 814 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~ 893 (973)
.++.+||+|||+|+.+..... .............||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~-~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~ 267 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGV-HKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD 267 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGC-CCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCeEEEEECCcceecccCCc-ccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC
Confidence 889999999999987643221 0001111223456999999999999999999999999999999999999999864333
Q ss_pred CccHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccccc
Q 039720 894 GLTLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEIF 966 (973)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 966 (973)
.. ............+...+++.+. ...++..+.+++..||+.||++||+++++++.|+++.+..
T Consensus 268 ~~-~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~ 331 (364)
T 3op5_A 268 PK-YVRDSKIRYRENIASLMDKCFP--------AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAI 331 (364)
T ss_dssp HH-HHHHHHHHHHHCHHHHHHHHSC--------TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HH-HHHHHHHHhhhhHHHHHHHhcc--------cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Confidence 22 1111111111112112211111 0122456788999999999999999999999999875443
No 103
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=3.4e-39 Score=369.17 Aligned_cols=262 Identities=21% Similarity=0.227 Sum_probs=206.7
Q ss_pred HHHHHHhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCceeEEeEeeec
Q 039720 667 AELSKATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK---KGATKSFVAECEALRNIRHRNLIKIITICSSI 743 (973)
Q Consensus 667 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 743 (973)
.++....++|++.++||+|+||+||+|+++.+++.||+|+++... ......+.+|+.++..++||||+++++++.+
T Consensus 67 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~- 145 (437)
T 4aw2_A 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD- 145 (437)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC-
T ss_pred hcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-
Confidence 344445689999999999999999999999999999999997432 2223448899999999999999999998654
Q ss_pred ccCCCceEEEEEeeccCCCHHHHhhh-cCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEec
Q 039720 744 DFKGADFKAIVYEYMQYGSVDDWLHH-TNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSD 822 (973)
Q Consensus 744 ~~~~~~~~~lv~e~~~~gsL~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~D 822 (973)
....++||||+++|+|.+++.. ...+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 146 ----~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~D 218 (437)
T 4aw2_A 146 ----DNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLAD 218 (437)
T ss_dssp ----SSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred ----CCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcc
Confidence 4789999999999999999987 46678888999999999999999999 999999999999999999999999
Q ss_pred cccchhccCCCCccCCCCCcccccccccccccCccccc-----CCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccH
Q 039720 823 FGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGM-----GGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTL 897 (973)
Q Consensus 823 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~ 897 (973)
||+|+...... .......+||+.|+|||++. ...|+.++|||||||++|||++|+.||......+
T Consensus 219 FGla~~~~~~~-------~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~--- 288 (437)
T 4aw2_A 219 FGSCLKLMEDG-------TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE--- 288 (437)
T ss_dssp CTTCEECCTTS-------CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH---
T ss_pred hhhhhhcccCC-------CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhH---
Confidence 99997654321 22233457999999999987 5678999999999999999999999997542211
Q ss_pred hhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCC--CCCHHHHHHH
Q 039720 898 HGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSE--RMQMTAVVKK 958 (973)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 958 (973)
.+.... .... ....+.........+.+++.+|+..+|++ ||+++|++++
T Consensus 289 -~~~~i~---------~~~~--~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 289 -TYGKIM---------NHKE--RFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp -HHHHHH---------THHH--HCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred -HHHhhh---------hccc--cccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 111110 0000 00001111123345678888999999988 9999999875
No 104
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.6e-39 Score=364.38 Aligned_cols=259 Identities=23% Similarity=0.363 Sum_probs=205.0
Q ss_pred hhcCCcCCccccccceeEEEEEE-----CCCCcEEEEEEeecc-cchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccC
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNL-----GEDGMSVAVKVMNLD-KKGATKSFVAECEALRNIRHRNLIKIITICSSIDFK 746 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 746 (973)
.++|++.+.||+|+||+||+|++ ..++..||||+++.. .......+.+|+.++++++||||+++++++..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~---- 145 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ---- 145 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEec----
Confidence 36799999999999999999994 457789999999644 23345678899999999999999999998643
Q ss_pred CCceEEEEEeeccCCCHHHHhhhcC-------CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCC---
Q 039720 747 GADFKAIVYEYMQYGSVDDWLHHTN-------DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDM--- 816 (973)
Q Consensus 747 ~~~~~~lv~e~~~~gsL~~~l~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~--- 816 (973)
....++||||+++|+|.+++.... .....+++.++.||+.||+|||++ +|+||||||+|||++.++
T Consensus 146 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~ 221 (367)
T 3l9p_A 146 -SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGR 221 (367)
T ss_dssp -SSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTC
T ss_pred -CCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCc
Confidence 467799999999999999998653 355677899999999999999999 999999999999999555
Q ss_pred cEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCc
Q 039720 817 VAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFNDGL 895 (973)
Q Consensus 817 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~~~~ 895 (973)
.+||+|||+|+...... .........||+.|+|||++.+..++.++|||||||++|||++ |+.||......
T Consensus 222 ~~kL~DFG~a~~~~~~~------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~-- 293 (367)
T 3l9p_A 222 VAKIGDFGMARDIYRAG------YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-- 293 (367)
T ss_dssp CEEECCCHHHHHHHHHS------SCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--
T ss_pred eEEECCCcccccccccc------ccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--
Confidence 59999999998653321 1122234568899999999999999999999999999999998 99999754321
Q ss_pred cHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccc
Q 039720 896 TLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGE 964 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 964 (973)
.+....... . ....+..++..+.+++.+||+.||++||+++||++.|+.+..
T Consensus 294 ~~~~~i~~~---~--------------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~ 345 (367)
T 3l9p_A 294 EVLEFVTSG---G--------------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 345 (367)
T ss_dssp HHHHHHHTT---C--------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcC---C--------------CCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence 111111100 0 011112334567899999999999999999999999998753
No 105
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=4.4e-39 Score=359.95 Aligned_cols=264 Identities=23% Similarity=0.397 Sum_probs=209.4
Q ss_pred HhhcCCcCCccccccceeEEEEEEC-----CCCcEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCceeEEeEeeeccc
Q 039720 672 ATKEFSSSNRIGKGSFGFVYKGNLG-----EDGMSVAVKVMNLDK-KGATKSFVAECEALRNIRHRNLIKIITICSSIDF 745 (973)
Q Consensus 672 ~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 745 (973)
..++|++.+.||+|+||+||+|++. .+++.||||+++... ....+.+.+|+.+++.++||||+++++++..
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--- 121 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV--- 121 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS---
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc---
Confidence 4578999999999999999999996 355899999997543 3345678999999999999999999998654
Q ss_pred CCCceEEEEEeeccCCCHHHHhhhc------------------------CCCchhhHHHHHHHHHHHHHHHHhcCCCCeE
Q 039720 746 KGADFKAIVYEYMQYGSVDDWLHHT------------------------NDKLEVGKLNIVIEVASVIEYLHNHCQPPIV 801 (973)
Q Consensus 746 ~~~~~~~lv~e~~~~gsL~~~l~~~------------------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~iv 801 (973)
....++||||+++|+|.+++... ..+.+.+++.++.||+.||+|||++ +|+
T Consensus 122 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~iv 196 (343)
T 1luf_A 122 --GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFV 196 (343)
T ss_dssp --SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCC
T ss_pred --CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence 47789999999999999999764 3456678899999999999999999 999
Q ss_pred ecCCCCCcEEecCCCcEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHH
Q 039720 802 HGDLKPSNVLLDHDMVAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMF 881 (973)
Q Consensus 802 HrDik~~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ell 881 (973)
||||||+||+++.++.+||+|||+++...... .........+|+.|+|||++.+..++.++|||||||++|||+
T Consensus 197 H~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 270 (343)
T 1luf_A 197 HRDLATRNCLVGENMVVKIADFGLSRNIYSAD------YYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 270 (343)
T ss_dssp CSCCSGGGEEECGGGCEEECCCSCHHHHTGGG------CBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred cCCCCcceEEECCCCeEEEeecCCCcccccCc------cccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHH
Confidence 99999999999999999999999998764321 011222345788999999999899999999999999999999
Q ss_pred h-CCCCCCCCCCCCccHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 039720 882 T-RRRPTDNMFNDGLTLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLC 960 (973)
Q Consensus 882 t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 960 (973)
+ |+.||......+ +..... ... . ...+..++..+.+++.+||+.||++||+++|+++.|+
T Consensus 271 t~g~~p~~~~~~~~--~~~~~~---~~~--------~------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~ 331 (343)
T 1luf_A 271 SYGLQPYYGMAHEE--VIYYVR---DGN--------I------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQ 331 (343)
T ss_dssp TTTCCTTTTSCHHH--HHHHHH---TTC--------C------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred hcCCCcCCCCChHH--HHHHHh---CCC--------c------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHH
Confidence 9 999997543211 111100 000 0 1111233456788999999999999999999999999
Q ss_pred hccccccC
Q 039720 961 AVGEIFIG 968 (973)
Q Consensus 961 ~~~~~~~~ 968 (973)
++.+...+
T Consensus 332 ~~~~~~~~ 339 (343)
T 1luf_A 332 RMCERAEG 339 (343)
T ss_dssp HTTC----
T ss_pred HHHhhhhh
Confidence 99877665
No 106
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.3e-38 Score=368.57 Aligned_cols=251 Identities=30% Similarity=0.402 Sum_probs=206.2
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceEE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFKA 752 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 752 (973)
.++|++.+.||+|+||+||+|++ .|+.||||+++... ..+.+.+|+.++++++||||+++++++... ....+
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~--~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~----~~~~~ 263 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEE----KGGLY 263 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECT----TSCEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEe--cCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcC----CCceE
Confidence 46799999999999999999999 57899999997543 457799999999999999999999987542 34789
Q ss_pred EEEeeccCCCHHHHhhhcCC--CchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhcc
Q 039720 753 IVYEYMQYGSVDDWLHHTND--KLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLS 830 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~~~--~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~ 830 (973)
+||||+++|+|.+++...+. .....+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 264 iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 340 (450)
T 1k9a_A 264 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 340 (450)
T ss_dssp EEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccc
Confidence 99999999999999987654 46677899999999999999999 99999999999999999999999999998543
Q ss_pred CCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCccHhhhhhHhcCccc
Q 039720 831 HHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHGYAKMALPKKV 909 (973)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
.. .....+++.|+|||++.+..++.++|||||||++|||++ |+.||......+ +.......
T Consensus 341 ~~-----------~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~~i~~~----- 402 (450)
T 1k9a_A 341 ST-----------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPRVEKG----- 402 (450)
T ss_dssp -----------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT--HHHHHHTT-----
T ss_pred cc-----------ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcC-----
Confidence 21 112356789999999999999999999999999999999 999998654332 11111100
Q ss_pred ccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccc
Q 039720 910 MGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGE 964 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 964 (973)
.....+..++..+.++|.+||+.||++|||+.|+++.|+++..
T Consensus 403 ------------~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~ 445 (450)
T 1k9a_A 403 ------------YKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRT 445 (450)
T ss_dssp ------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ------------CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 0011223455678899999999999999999999999998754
No 107
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=2.2e-38 Score=348.70 Aligned_cols=267 Identities=22% Similarity=0.341 Sum_probs=200.1
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCce
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK--KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADF 750 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 750 (973)
.++|++.++||+|+||+||+|++. +|+.||+|+++... ......+.+|+++++.++||||+++++++. +...
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~~~ 93 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIH-----SERC 93 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEEC-----CSSC
T ss_pred HhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEc-----cCCE
Confidence 478999999999999999999995 69999999997543 223567889999999999999999999864 3478
Q ss_pred EEEEEeeccCCCHHHHhhhc-CCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhc
Q 039720 751 KAIVYEYMQYGSVDDWLHHT-NDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 829 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~ 829 (973)
.++||||+++ ++.+++... ...++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 94 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 169 (311)
T 3niz_A 94 LTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAF 169 (311)
T ss_dssp EEEEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEET
T ss_pred EEEEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceec
Confidence 9999999985 777777654 3467788999999999999999999 9999999999999999999999999999865
Q ss_pred cCCCCccCCCCCcccccccccccccCcccccC-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhc---
Q 039720 830 SHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMG-GDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMAL--- 905 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~--- 905 (973)
... ........||+.|+|||++.+ ..++.++||||+||++|+|++|+.||......+. +........
T Consensus 170 ~~~--------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~~~~~~ 240 (311)
T 3niz_A 170 GIP--------VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ-LPKIFSILGTPN 240 (311)
T ss_dssp TSC--------CC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTH-HHHHHHHHCCCC
T ss_pred CCC--------cccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHHCCCC
Confidence 432 122234568999999999876 5689999999999999999999999987654432 211111110
Q ss_pred CcccccccCcc------cc--cccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 906 PKKVMGIVDPS------LL--MEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 906 ~~~~~~~~~~~------~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
+.......+.. .. ...........+..++.+++.+||+.||++|||++|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 241 PREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp TTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 00000000000 00 0000001112234567889999999999999999999873
No 108
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.6e-38 Score=353.26 Aligned_cols=267 Identities=18% Similarity=0.220 Sum_probs=208.7
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhc-CCCCceeEEeEeeecccCCCceE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNI-RHRNLIKIITICSSIDFKGADFK 751 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 751 (973)
.++|++.+.||+|+||+||+|++..+++.||||++..... .+.+.+|+.+++.+ +||||+++++++.. ....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-----~~~~ 80 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPC-----GKYN 80 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEE-----TTEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEec-----CCcc
Confidence 3689999999999999999999999999999999975432 34588999999999 89999999998655 3788
Q ss_pred EEEEeeccCCCHHHHhhhc-CCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCc-----EEEecccc
Q 039720 752 AIVYEYMQYGSVDDWLHHT-NDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMV-----AHVSDFGL 825 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~-----~kl~Dfg~ 825 (973)
++||||+ +++|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+
T Consensus 81 ~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~ 156 (330)
T 2izr_A 81 AMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFAL 156 (330)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTT
T ss_pred EEEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEccc
Confidence 9999999 99999999863 5677888999999999999999999 9999999999999999887 99999999
Q ss_pred chhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhc
Q 039720 826 ARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMAL 905 (973)
Q Consensus 826 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~ 905 (973)
++......... ...........||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+.....
T Consensus 157 a~~~~~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~-~~~~~~i~~ 234 (330)
T 2izr_A 157 AKEYIDPETKK-HIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTL-KERYQKIGD 234 (330)
T ss_dssp CEESBCTTTCC-BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSH-HHHHHHHHH
T ss_pred ceeeecCCCCc-cccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccH-HHHHHHHHh
Confidence 98764432100 0011123456799999999999999999999999999999999999999987543321 111111100
Q ss_pred CcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccc
Q 039720 906 PKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGE 964 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 964 (973)
... ..... .....++ .+.+++.+||+.||++||++++|.+.|+++.+
T Consensus 235 ~~~---~~~~~--------~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~ 281 (330)
T 2izr_A 235 TKR---ATPIE--------VLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFD 281 (330)
T ss_dssp HHH---HSCHH--------HHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred hhc---cCCHH--------HHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHH
Confidence 000 00000 0001123 77899999999999999999999999987753
No 109
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=2.6e-38 Score=348.29 Aligned_cols=266 Identities=23% Similarity=0.334 Sum_probs=201.5
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecc---cchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCc
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLD---KKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGAD 749 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 749 (973)
.++|++.+.||+|+||.||+|++..+|+.||||+++.. .......+.+|+.+++.++||||+++++++.. ..
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~ 105 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE-----DN 105 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-----TT
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-----CC
Confidence 35799999999999999999999999999999999753 23345678999999999999999999998765 37
Q ss_pred eEEEEEeeccCCCHHHHhhh----cCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEecccc
Q 039720 750 FKAIVYEYMQYGSVDDWLHH----TNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 825 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~ 825 (973)
..++||||+++++|.+++.. ....++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~ 182 (310)
T 2wqm_A 106 ELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGL 182 (310)
T ss_dssp EEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC--
T ss_pred cEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccc
Confidence 89999999999999999864 34567788899999999999999999 999999999999999999999999999
Q ss_pred chhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhc
Q 039720 826 ARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMAL 905 (973)
Q Consensus 826 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~ 905 (973)
+...... ........|++.|+|||++.+..++.++||||||+++|+|++|+.||.........+.....
T Consensus 183 ~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--- 251 (310)
T 2wqm_A 183 GRFFSSK--------TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE--- 251 (310)
T ss_dssp ------------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHH---
T ss_pred eeeecCC--------CccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhh---
Confidence 9865432 11223456899999999999999999999999999999999999999754322111111110
Q ss_pred CcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccccccCCC
Q 039720 906 PKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEIFIGPP 970 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 970 (973)
.... + ......++..+.+++.+||+.||++||+++|+++.|+++.....+||
T Consensus 252 ~~~~-----~--------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~~ 303 (310)
T 2wqm_A 252 QCDY-----P--------PLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSL 303 (310)
T ss_dssp TTCS-----C--------CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC---
T ss_pred cccC-----C--------CCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhhh
Confidence 0000 0 00012234567789999999999999999999999999988888776
No 110
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=7.5e-39 Score=347.72 Aligned_cols=256 Identities=23% Similarity=0.402 Sum_probs=204.3
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceEE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFKA 752 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 752 (973)
.++|++.+.||+|+||+||+|++. ++..||+|+++.... ..+.+.+|+++++.++||||+++++++.. ....+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 95 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTK-----QRPIF 95 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECS-----SSSEE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEec-----CCCeE
Confidence 468999999999999999999985 778999999975433 34678999999999999999999998643 47789
Q ss_pred EEEeeccCCCHHHHhhh-cCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhccC
Q 039720 753 IVYEYMQYGSVDDWLHH-TNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLSH 831 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~~ 831 (973)
+||||+++++|.+++.. .....+..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.++....
T Consensus 96 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 172 (283)
T 3gen_A 96 IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172 (283)
T ss_dssp EEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCC
T ss_pred EEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccccc
Confidence 99999999999999976 45677788999999999999999999 999999999999999999999999999986543
Q ss_pred CCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCccHhhhhhHhcCcccc
Q 039720 832 HPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHGYAKMALPKKVM 910 (973)
Q Consensus 832 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
.. ........+|+.|+|||++.+..++.++||||+|+++|+|++ |+.||....... .......
T Consensus 173 ~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~--~~~~~~~------- 236 (283)
T 3gen_A 173 DE-------YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE--TAEHIAQ------- 236 (283)
T ss_dssp HH-------HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH--HHHHHHT-------
T ss_pred cc-------cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhH--HHHHHhc-------
Confidence 21 111223346788999999998899999999999999999998 999997643221 1110000
Q ss_pred cccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccc
Q 039720 911 GIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGE 964 (973)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 964 (973)
... ...+...+..+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 237 -~~~---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~ 280 (283)
T 3gen_A 237 -GLR---------LYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280 (283)
T ss_dssp -TCC---------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -ccC---------CCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence 000 00111223467789999999999999999999999998754
No 111
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.4e-39 Score=365.74 Aligned_cols=262 Identities=23% Similarity=0.246 Sum_probs=205.2
Q ss_pred HHHHHHHhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCceeEEeEeee
Q 039720 666 YAELSKATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK---KGATKSFVAECEALRNIRHRNLIKIITICSS 742 (973)
Q Consensus 666 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 742 (973)
..+.....++|++.+.||+|+||+||+|+++.+|+.||||+++... ....+.+.+|..++..++||||+++++++.+
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 3444455689999999999999999999999999999999997432 2233458899999999999999999998644
Q ss_pred cccCCCceEEEEEeeccCCCHHHHhhhcC-CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEe
Q 039720 743 IDFKGADFKAIVYEYMQYGSVDDWLHHTN-DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVS 821 (973)
Q Consensus 743 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~ 821 (973)
....++||||+++|+|.+++.+.+ .+++..++.++.||+.||+|||++ +|+||||||+|||++.++++||+
T Consensus 133 -----~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~ 204 (412)
T 2vd5_A 133 -----ENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLA 204 (412)
T ss_dssp -----SSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred -----CCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEe
Confidence 578999999999999999998754 677888999999999999999999 99999999999999999999999
Q ss_pred ccccchhccCCCCccCCCCCcccccccccccccCccccc-------CCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCC
Q 039720 822 DFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGM-------GGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDG 894 (973)
Q Consensus 822 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~ 894 (973)
|||+|+...... .......+||+.|+|||++. ...|+.++|||||||++|||++|+.||......+
T Consensus 205 DFGla~~~~~~~-------~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~ 277 (412)
T 2vd5_A 205 DFGSCLKLRADG-------TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAE 277 (412)
T ss_dssp CCTTCEECCTTS-------CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred echhheeccCCC-------ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHH
Confidence 999998654321 11223457999999999987 4578999999999999999999999997543211
Q ss_pred ccHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCC---CCHHHHHHH
Q 039720 895 LTLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSER---MQMTAVVKK 958 (973)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Ps~~evl~~ 958 (973)
.+........ ....+......+..+.+++.+||. +|++| |+++|++++
T Consensus 278 ----~~~~i~~~~~-----------~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 278 ----TYGKIVHYKE-----------HLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp ----HHHHHHTHHH-----------HCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred ----HHHHHHhccc-----------CcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 1111100000 000011112234566788899999 99998 589998865
No 112
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.3e-38 Score=364.92 Aligned_cols=254 Identities=22% Similarity=0.288 Sum_probs=197.5
Q ss_pred HhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccc--------hhHHHHHHHHHHHHhcCCCCceeEEeEeeec
Q 039720 672 ATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKK--------GATKSFVAECEALRNIRHRNLIKIITICSSI 743 (973)
Q Consensus 672 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 743 (973)
..++|.+.+.||+|+||+||+|.+..+++.||||++..... .....+.+|+.++++++||||+++++++..
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 45789999999999999999999999999999999975421 112347899999999999999999998643
Q ss_pred ccCCCceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCC---cEEE
Q 039720 744 DFKGADFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDM---VAHV 820 (973)
Q Consensus 744 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~---~~kl 820 (973)
+..++||||+++|+|.+++.......+..++.++.|++.||+|||++ +|+||||||+|||++.++ .+||
T Consensus 212 -----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl 283 (419)
T 3i6u_A 212 -----EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKI 283 (419)
T ss_dssp -----SEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEE
T ss_pred -----CceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEE
Confidence 56799999999999999998888888899999999999999999999 999999999999997544 5999
Q ss_pred eccccchhccCCCCccCCCCCcccccccccccccCcccccC---CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccH
Q 039720 821 SDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMG---GDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTL 897 (973)
Q Consensus 821 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~ 897 (973)
+|||+|+..... .......||+.|+|||++.+ ..|+.++|||||||++|+|++|+.||..........
T Consensus 284 ~DFG~a~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~ 354 (419)
T 3i6u_A 284 TDFGHSKILGET---------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 354 (419)
T ss_dssp CCSSTTTSCC--------------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHH
T ss_pred eecccceecCCC---------ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHH
Confidence 999999865432 22334679999999999753 678899999999999999999999998654332211
Q ss_pred hhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 898 HGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
......... . .+.........+.+++.+||+.||++||+++|++++
T Consensus 355 ~~i~~~~~~----------~-----~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 355 DQITSGKYN----------F-----IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp HHHHTTCCC----------C-----CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHhcCCCC----------C-----CchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 111111000 0 011112345667899999999999999999999874
No 113
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=2.5e-38 Score=342.52 Aligned_cols=253 Identities=20% Similarity=0.239 Sum_probs=207.6
Q ss_pred HhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceE
Q 039720 672 ATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFK 751 (973)
Q Consensus 672 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 751 (973)
..++|++.+.||+|+||+||+|++..++..||+|++........+.+.+|+++++.++||||+++++++.. ....
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~ 81 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFED-----NTDI 81 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----SSEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEec-----CCeE
Confidence 35689999999999999999999999999999999987666667889999999999999999999998654 4789
Q ss_pred EEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe---cCCCcEEEeccccchh
Q 039720 752 AIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLL---DHDMVAHVSDFGLARF 828 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl---~~~~~~kl~Dfg~a~~ 828 (973)
++||||+++++|.+++.......+..++.++.|++.|++|||++ +|+||||||+||++ +.++.+||+|||.+..
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~ 158 (277)
T 3f3z_A 82 YLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR 158 (277)
T ss_dssp EEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEeccccee
Confidence 99999999999999998888888899999999999999999999 99999999999999 7889999999999986
Q ss_pred ccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCcc
Q 039720 829 LSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKK 908 (973)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 908 (973)
.... .......||+.|+|||++.+. ++.++||||||+++|+|++|+.||......+. .........
T Consensus 159 ~~~~---------~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~--- 224 (277)
T 3f3z_A 159 FKPG---------KMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEV-MLKIREGTF--- 224 (277)
T ss_dssp CCTT---------SCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCCC---
T ss_pred ccCc---------cchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHH-HHHHHhCCC---
Confidence 5432 222345689999999997654 89999999999999999999999976432110 001000000
Q ss_pred cccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 909 VMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
... .......+..+.+++.+|++.||++||++.|+++.
T Consensus 225 -------~~~-----~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 225 -------TFP-----EKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp -------CCC-----HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred -------CCC-----chhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 00011234667899999999999999999999864
No 114
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=4.2e-38 Score=344.54 Aligned_cols=269 Identities=14% Similarity=0.158 Sum_probs=211.6
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhc-CCCCceeEEeEeeecccCCCceE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNI-RHRNLIKIITICSSIDFKGADFK 751 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 751 (973)
.++|++.+.||+|+||+||+|++..+++.||||++.... ..+.+.+|+.+++.+ +|++++++++++.. ....
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~-----~~~~ 81 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQE-----GLHN 81 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEE-----TTEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCC-----Ccee
Confidence 467999999999999999999999999999999986433 334578899999999 79999999998654 4789
Q ss_pred EEEEeeccCCCHHHHhhhcC-CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCc-----EEEecccc
Q 039720 752 AIVYEYMQYGSVDDWLHHTN-DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMV-----AHVSDFGL 825 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~-----~kl~Dfg~ 825 (973)
++||||+ +++|.+++...+ ..++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||+
T Consensus 82 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~ 157 (298)
T 1csn_A 82 VLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM 157 (298)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTT
T ss_pred EEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcc
Confidence 9999999 999999998654 477888999999999999999999 9999999999999987776 99999999
Q ss_pred chhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccH--hhhhhH
Q 039720 826 ARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTL--HGYAKM 903 (973)
Q Consensus 826 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~--~~~~~~ 903 (973)
++......... ...........||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ......
T Consensus 158 ~~~~~~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 236 (298)
T 1csn_A 158 VKFYRDPVTKQ-HIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEK 236 (298)
T ss_dssp CEESBCTTTCC-BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHH
T ss_pred ccccccccccc-cccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhh
Confidence 98765432100 001122345579999999999999999999999999999999999999998654322110 010000
Q ss_pred hcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhcccccc
Q 039720 904 ALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEIFI 967 (973)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 967 (973)
...... ......++..+.+++.+||+.||++||++++|++.|+++.+...
T Consensus 237 ~~~~~~--------------~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 237 KQSTPL--------------RELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp HHHSCH--------------HHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred ccCccH--------------HHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 000000 01111335678899999999999999999999999998865543
No 115
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=7.6e-39 Score=347.27 Aligned_cols=257 Identities=21% Similarity=0.341 Sum_probs=196.6
Q ss_pred hhcCCcCCccccccceeEEEEEECCC---CcEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCC
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGED---GMSVAVKVMNLDK-KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGA 748 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 748 (973)
.++|++.+.||+|+||+||+|++..+ +..||+|+++... ....+.+.+|+.+++.++||||+++++++. .
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------~ 87 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT------E 87 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC------S
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc------c
Confidence 46899999999999999999998653 4579999986533 334567899999999999999999999863 2
Q ss_pred ceEEEEEeeccCCCHHHHhhhcC-CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccch
Q 039720 749 DFKAIVYEYMQYGSVDDWLHHTN-DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 827 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~ 827 (973)
+..++||||+++|+|.+++.... ..++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 164 (281)
T 1mp8_A 88 NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 164 (281)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-----
T ss_pred CccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECcccccc
Confidence 56789999999999999998654 567788899999999999999999 99999999999999999999999999998
Q ss_pred hccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCccHhhhhhHhcC
Q 039720 828 FLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHGYAKMALP 906 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~ 906 (973)
...... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+ ........
T Consensus 165 ~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~--~~~~i~~~-- 233 (281)
T 1mp8_A 165 YMEDST-------YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIGRIENG-- 233 (281)
T ss_dssp ---------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHHTT--
T ss_pred ccCccc-------ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH--HHHHHHcC--
Confidence 764322 112223456788999999998999999999999999999997 999997653321 11111000
Q ss_pred cccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccc
Q 039720 907 KKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGE 964 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 964 (973)
. ....+..++..+.+++.+||+.||++||+++|+++.|+++.+
T Consensus 234 ---------~------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 276 (281)
T 1mp8_A 234 ---------E------RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 276 (281)
T ss_dssp ---------C------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---------C------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 0 011112344567789999999999999999999999998743
No 116
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=356.24 Aligned_cols=277 Identities=20% Similarity=0.235 Sum_probs=207.5
Q ss_pred hhcCCcCCccccccceeEEEEEECC---CCcEEEEEEeecccch-----------hHHHHHHHHHHHHhcCCCCceeEEe
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGE---DGMSVAVKVMNLDKKG-----------ATKSFVAECEALRNIRHRNLIKIIT 738 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~h~niv~~~~ 738 (973)
.++|++.+.||+|+||+||+|++.. ++..||||++...... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 3689999999999999999999987 7899999999755321 1134667888999999999999999
Q ss_pred EeeecccCCCceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCC--
Q 039720 739 ICSSIDFKGADFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDM-- 816 (973)
Q Consensus 739 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~-- 816 (973)
++... +.+....++||||+ +++|.+++...+.+++.+++.++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 116 ~~~~~-~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 116 SGLTE-FKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEEE-SSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSSTT
T ss_pred ccccc-cCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCCC
Confidence 98763 45568899999999 999999998877788899999999999999999999 999999999999999887
Q ss_pred cEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCcc
Q 039720 817 VAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLT 896 (973)
Q Consensus 817 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~ 896 (973)
.+||+|||+++.+..... .............||+.|+|||++.+..++.++|||||||++|||++|+.||.........
T Consensus 191 ~~kL~Dfg~a~~~~~~~~-~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~ 269 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGN-HKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVA 269 (345)
T ss_dssp SEEECCCTTCEESSGGGC-CCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHH
T ss_pred cEEEEeCCCceecccccc-cccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHH
Confidence 999999999987643211 0011122224457999999999999999999999999999999999999999654333222
Q ss_pred HhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccc
Q 039720 897 LHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGE 964 (973)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 964 (973)
.......... .+......... ...++..+.+++.+||+.||++||++++|++.|+.+.-
T Consensus 270 ~~~~~~~~~~-----~~~~~~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 270 VQTAKTNLLD-----ELPQSVLKWAP----SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHHHHH-----TTTHHHHHHSC----TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHHHHHhhcc-----cccHHHHhhcc----ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 2111111100 00000000000 01234567889999999999999999999999998753
No 117
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=351.15 Aligned_cols=276 Identities=19% Similarity=0.219 Sum_probs=211.5
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceEE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFKA 752 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 752 (973)
.++|++.+.||+|+||.||+|++..+++.||||++........+.+.+|+.+++.++||||+++++++... .......+
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~~~~~ 106 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRE-RGAKHEAW 106 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEE-ETTEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEec-cCCCceeE
Confidence 36899999999999999999999999999999999776666678899999999999999999999987642 22346789
Q ss_pred EEEeeccCCCHHHHhhh----cCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchh
Q 039720 753 IVYEYMQYGSVDDWLHH----TNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 828 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~ 828 (973)
+||||+.+|+|.+++.. ....++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+..
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 99999999999999876 35567888999999999999999999 999999999999999999999999999875
Q ss_pred ccCCCCccC-CCCCcccccccccccccCcccccCCC---CCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHh
Q 039720 829 LSHHPFLVA-PEGQSSSIEMKGTIGYIGPEYGMGGD---LSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMA 904 (973)
Q Consensus 829 ~~~~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~ 904 (973)
......... ...........||+.|+|||++.+.. ++.++|||||||++|+|++|+.||................
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~- 262 (317)
T 2buj_A 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN- 262 (317)
T ss_dssp SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHC-
T ss_pred cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhc-
Confidence 421100000 00000112345799999999987654 6889999999999999999999996432221111111100
Q ss_pred cCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccccccCC
Q 039720 905 LPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEIFIGP 969 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 969 (973)
... ......++..+.+++.+||+.||++||+++|+++.|+++.....++
T Consensus 263 -----------~~~-----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~~ 311 (317)
T 2buj_A 263 -----------QLS-----IPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQ 311 (317)
T ss_dssp -----------C-------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC-
T ss_pred -----------cCC-----CCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCCC
Confidence 000 0001223456788999999999999999999999999987655544
No 118
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=7.2e-39 Score=355.00 Aligned_cols=264 Identities=22% Similarity=0.367 Sum_probs=193.5
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCc---EEEEEEeecc--cchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccC-
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGM---SVAVKVMNLD--KKGATKSFVAECEALRNIRHRNLIKIITICSSIDFK- 746 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~- 746 (973)
.++|++.+.||+|+||+||+|++..++. .||||+++.. .....+.+.+|+++++.++||||+++++++......
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 4689999999999999999999876665 8999999754 334567899999999999999999999987653211
Q ss_pred CCceEEEEEeeccCCCHHHHhhhcC------CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEE
Q 039720 747 GADFKAIVYEYMQYGSVDDWLHHTN------DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHV 820 (973)
Q Consensus 747 ~~~~~~lv~e~~~~gsL~~~l~~~~------~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl 820 (973)
.....++||||+.+|+|.+++.... ..++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl 178 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCV 178 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEE
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEE
Confidence 1123489999999999999986543 466788999999999999999999 9999999999999999999999
Q ss_pred eccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCccHhh
Q 039720 821 SDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHG 899 (973)
Q Consensus 821 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~~~~~~~~ 899 (973)
+|||+++...... .........+++.|+|||++.+..++.++|||||||++|||++ |+.||....... ...
T Consensus 179 ~Dfg~a~~~~~~~------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~ 250 (323)
T 3qup_A 179 ADFGLSRKIYSGD------YYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE--IYN 250 (323)
T ss_dssp CCCCC-----------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHH
T ss_pred eeccccccccccc------cccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH--HHH
Confidence 9999998664322 1122223456788999999999999999999999999999999 999998653321 111
Q ss_pred hhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccc
Q 039720 900 YAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGE 964 (973)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 964 (973)
..... . ....+..++..+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 251 ~~~~~---~--------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~ 298 (323)
T 3qup_A 251 YLIGG---N--------------RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILG 298 (323)
T ss_dssp HHHTT---C--------------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhcC---C--------------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 10000 0 011112334567899999999999999999999999998853
No 119
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=362.43 Aligned_cols=277 Identities=20% Similarity=0.259 Sum_probs=215.1
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK-KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFK 751 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 751 (973)
.++|++.+.||+|+||+||+|++..+|+.||||+++... ....+.+.+|++++++++||||+++++++... .....
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~---~~~~~ 84 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEET---TTRHK 84 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECT---TTCCE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccC---CCCee
Confidence 468999999999999999999999999999999997543 23456788999999999999999999987642 33578
Q ss_pred EEEEeeccCCCHHHHhhhcCC---CchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe----cCCCcEEEeccc
Q 039720 752 AIVYEYMQYGSVDDWLHHTND---KLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLL----DHDMVAHVSDFG 824 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~~---~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl----~~~~~~kl~Dfg 824 (973)
++||||+++|+|.+++..... +++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||
T Consensus 85 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG 161 (396)
T 4eut_A 85 VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (396)
T ss_dssp EEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGG
T ss_pred EEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCC
Confidence 999999999999999986443 67788999999999999999999 99999999999999 777889999999
Q ss_pred cchhccCCCCccCCCCCcccccccccccccCcccccC--------CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCcc
Q 039720 825 LARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMG--------GDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLT 896 (973)
Q Consensus 825 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~ 896 (973)
+++..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.........
T Consensus 162 ~a~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~ 232 (396)
T 4eut_A 162 AARELEDD---------EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN 232 (396)
T ss_dssp GCEECCCG---------GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTC
T ss_pred CceEccCC---------CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccch
Confidence 99865432 22234569999999998765 56788999999999999999999999765443322
Q ss_pred HhhhhhHhc--C-cccccc---cCcccc--ccc-CCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccc
Q 039720 897 LHGYAKMAL--P-KKVMGI---VDPSLL--MEA-RGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGE 964 (973)
Q Consensus 897 ~~~~~~~~~--~-~~~~~~---~~~~~~--~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 964 (973)
......... + ..+... .+.... ... ............+.+++.+||+.||++||+++|+++.++++.+
T Consensus 233 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~ 309 (396)
T 4eut_A 233 KEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (396)
T ss_dssp HHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence 222222111 1 111111 110000 000 0122335677888999999999999999999999999988743
No 120
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.2e-37 Score=363.07 Aligned_cols=190 Identities=25% Similarity=0.329 Sum_probs=91.7
Q ss_pred CCCCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhcccccccee
Q 039720 84 NLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERL 163 (973)
Q Consensus 84 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L 163 (973)
.+++|+.|++++|.++ .+| .+..+++|++|+|++|.+++. |. ++++++|++|++++|.+.+..+
T Consensus 44 ~l~~l~~L~l~~~~i~-~l~-~~~~l~~L~~L~Ls~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~------------ 107 (466)
T 1o6v_A 44 DLDQVTTLQADRLGIK-SID-GVEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIADITP------------ 107 (466)
T ss_dssp HHHTCCEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG------------
T ss_pred HhccccEEecCCCCCc-cCc-chhhhcCCCEEECCCCccCCc-hh-hhccccCCEEECCCCccccChh------------
Confidence 3566777777777776 355 366677777777777777632 32 5555444444444444443322
Q ss_pred eccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccCCccc
Q 039720 164 SLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFK 243 (973)
Q Consensus 164 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 243 (973)
++++++|++|++++|++++. +. +.++++|++|++++|.+++. + .+..+++|++|++. |.+.
T Consensus 108 --------------~~~l~~L~~L~L~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~ 168 (466)
T 1o6v_A 108 --------------LANLTNLTGLTLFNNQITDI-DP-LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVT 168 (466)
T ss_dssp --------------GTTCTTCCEEECCSSCCCCC-GG-GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCC
T ss_pred --------------hcCCCCCCEEECCCCCCCCC-hH-HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-Cccc
Confidence 44444444444444444422 11 44444444444444444421 1 23344444444442 2222
Q ss_pred cCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceecccccC
Q 039720 244 GSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNL 315 (973)
Q Consensus 244 ~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 315 (973)
+ ++. +.++++|++|++++|.+++. ..+..+++|++|++++|++++..+ +..+++|++|++++|++
T Consensus 169 ~-~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l 233 (466)
T 1o6v_A 169 D-LKP--LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQL 233 (466)
T ss_dssp C-CGG--GTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCC
T ss_pred C-chh--hccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCc
Confidence 1 111 12445555555555554432 234555555555555555554433 44445555555555544
No 121
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=6.5e-38 Score=345.99 Aligned_cols=268 Identities=21% Similarity=0.350 Sum_probs=188.8
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccc-hhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKK-GATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFK 751 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 751 (973)
.++|++.+.||+|+||+||+|++..+|+.||+|+++.... ...+.+.+|+++++.++||||+++++++.. .+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~~ 78 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHT-----ENKL 78 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECC-----TTEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEE-----CCeE
Confidence 4689999999999999999999999999999999975532 344678899999999999999999998643 4789
Q ss_pred EEEEeeccCCCHHHHhhhc------CCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEecccc
Q 039720 752 AIVYEYMQYGSVDDWLHHT------NDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 825 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~ 825 (973)
++||||++ |+|.+++... ....+..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 79 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 154 (317)
T 2pmi_A 79 TLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGL 154 (317)
T ss_dssp EEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSS
T ss_pred EEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCcc
Confidence 99999998 5999988654 2356677889999999999999999 999999999999999999999999999
Q ss_pred chhccCCCCccCCCCCcccccccccccccCcccccC-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHh
Q 039720 826 ARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMG-GDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMA 904 (973)
Q Consensus 826 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~ 904 (973)
++..... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+ .+.......
T Consensus 155 ~~~~~~~--------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~ 225 (317)
T 2pmi_A 155 ARAFGIP--------VNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE-QLKLIFDIM 225 (317)
T ss_dssp CEETTSC--------CCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHH
T ss_pred ceecCCC--------cccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHh
Confidence 9865422 112234568999999999876 468999999999999999999999997643321 111111110
Q ss_pred -cC-cc----cccc--cCcccccccC-------CCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 905 -LP-KK----VMGI--VDPSLLMEAR-------GPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 905 -~~-~~----~~~~--~~~~~~~~~~-------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
.+ .. .... ..+....... .+.........+.+++.+||+.||++|||++|+++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 226 GTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp CSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 00 00 0000 0000000000 000011234567899999999999999999999864
No 122
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=5.6e-39 Score=355.95 Aligned_cols=257 Identities=23% Similarity=0.345 Sum_probs=202.8
Q ss_pred hcCCcCCccccccceeEEEEEECCCCcE----EEEEEeeccc-chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCC
Q 039720 674 KEFSSSNRIGKGSFGFVYKGNLGEDGMS----VAVKVMNLDK-KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGA 748 (973)
Q Consensus 674 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 748 (973)
++|++.+.||+|+||+||+|++..+++. ||+|++.... ......+.+|+.+++.++||||+++++++..
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------ 86 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG------ 86 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB------
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC------
Confidence 5799999999999999999999888775 7777764332 2233567789999999999999999998742
Q ss_pred ceEEEEEeeccCCCHHHHhhhc-CCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccch
Q 039720 749 DFKAIVYEYMQYGSVDDWLHHT-NDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 827 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~ 827 (973)
...++||||+.+|+|.+++... ....+..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 87 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 163 (325)
T 3kex_A 87 SSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVAD 163 (325)
T ss_dssp SSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGG
T ss_pred CccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCccc
Confidence 5688999999999999998764 4567788999999999999999999 99999999999999999999999999998
Q ss_pred hccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCccHhhhhhHhcC
Q 039720 828 FLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHGYAKMALP 906 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~ 906 (973)
...... .........||+.|+|||++.+..++.++|||||||++|+|++ |+.||....... +.........
T Consensus 164 ~~~~~~------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~~~~~~~~ 235 (325)
T 3kex_A 164 LLPPDD------KQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE--VPDLLEKGER 235 (325)
T ss_dssp GSCCCT------TCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH--HHHHHHTTCB
T ss_pred ccCccc------ccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH--HHHHHHcCCC
Confidence 765432 1222334567889999999999999999999999999999999 999998654321 1111111000
Q ss_pred cccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccc
Q 039720 907 KKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGE 964 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 964 (973)
...+..++..+.+++.+||+.||++||+++|+++.|+++..
T Consensus 236 -----------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 236 -----------------LAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp -----------------CCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred -----------------CCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 00111123346688899999999999999999999998753
No 123
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.2e-38 Score=351.86 Aligned_cols=258 Identities=22% Similarity=0.370 Sum_probs=208.1
Q ss_pred hhcCCcCCccccccceeEEEEEE-----CCCCcEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccC
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNL-----GEDGMSVAVKVMNLDK-KGATKSFVAECEALRNIRHRNLIKIITICSSIDFK 746 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 746 (973)
.++|.+.+.||+|+||.||+|++ ..+++.||||+++... ....+.+.+|+++++.++||||+++++++..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~---- 97 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ---- 97 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS----
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEec----
Confidence 46899999999999999999988 3456899999997543 3345778999999999999999999998643
Q ss_pred CCceEEEEEeeccCCCHHHHhhhcCC------------------------CchhhHHHHHHHHHHHHHHHHhcCCCCeEe
Q 039720 747 GADFKAIVYEYMQYGSVDDWLHHTND------------------------KLEVGKLNIVIEVASVIEYLHNHCQPPIVH 802 (973)
Q Consensus 747 ~~~~~~lv~e~~~~gsL~~~l~~~~~------------------------~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH 802 (973)
....++||||+++|+|.+++..... ..+.+++.++.|++.||+|||++ +|+|
T Consensus 98 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH 173 (314)
T 2ivs_A 98 -DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVH 173 (314)
T ss_dssp -SSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEEC
T ss_pred -CCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcc
Confidence 4678999999999999999986543 55678899999999999999999 9999
Q ss_pred cCCCCCcEEecCCCcEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh
Q 039720 803 GDLKPSNVLLDHDMVAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT 882 (973)
Q Consensus 803 rDik~~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt 882 (973)
|||||+||+++.++.+||+|||+++....... ........+|+.|+|||++.+..++.++|||||||++|||++
T Consensus 174 ~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t 247 (314)
T 2ivs_A 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDS------YVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247 (314)
T ss_dssp CCCSGGGEEEETTTEEEECCCTTCEECTTTSC------EECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHT
T ss_pred cccchheEEEcCCCCEEEcccccccccccccc------ceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHh
Confidence 99999999999999999999999986643221 112223457888999999999899999999999999999999
Q ss_pred -CCCCCCCCCCCCccHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHh
Q 039720 883 -RRRPTDNMFNDGLTLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCA 961 (973)
Q Consensus 883 -g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 961 (973)
|+.||....... +........ ....+..++..+.+++.+||+.||++||+++|+++.|++
T Consensus 248 ~g~~p~~~~~~~~--~~~~~~~~~-----------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~ 308 (314)
T 2ivs_A 248 LGGNPYPGIPPER--LFNLLKTGH-----------------RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEK 308 (314)
T ss_dssp TSCCSSTTCCGGG--HHHHHHTTC-----------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCCCCCCCHHH--HHHHhhcCC-----------------cCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 999997653321 111111000 011112334567889999999999999999999999998
Q ss_pred cc
Q 039720 962 VG 963 (973)
Q Consensus 962 ~~ 963 (973)
+.
T Consensus 309 ~~ 310 (314)
T 2ivs_A 309 MM 310 (314)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 124
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=2e-38 Score=352.90 Aligned_cols=263 Identities=22% Similarity=0.334 Sum_probs=202.4
Q ss_pred HhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCceeEEeEeeeccc-----
Q 039720 672 ATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK-KGATKSFVAECEALRNIRHRNLIKIITICSSIDF----- 745 (973)
Q Consensus 672 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~----- 745 (973)
..++|++.+.||+|+||+||+|++..+|+.||||+++... ....+.+.+|++++++++||||+++++++.+...
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 3568999999999999999999999999999999997544 3356789999999999999999999998765321
Q ss_pred -----------------------------------------------CCCceEEEEEeeccCCCHHHHhhhcCCCch---
Q 039720 746 -----------------------------------------------KGADFKAIVYEYMQYGSVDDWLHHTNDKLE--- 775 (973)
Q Consensus 746 -----------------------------------------------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~--- 775 (973)
......++||||+++|+|.+++........
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~ 163 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH 163 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence 112348999999999999999987654433
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhccCCCCccCC----CCCcccccccccc
Q 039720 776 VGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLSHHPFLVAP----EGQSSSIEMKGTI 851 (973)
Q Consensus 776 ~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~----~~~~~~~~~~gt~ 851 (973)
..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++........... ..........||+
T Consensus 164 ~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred HHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence 34789999999999999999 9999999999999999999999999999876543210000 0011223456999
Q ss_pred cccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCcccccccCcccccccCCCchhHHHH
Q 039720 852 GYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECL 931 (973)
Q Consensus 852 ~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (973)
.|+|||++.+..++.++||||+||++|||++|..|+... ....... .....+.......
T Consensus 241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~-------~~~~~~~--------------~~~~~~~~~~~~~ 299 (332)
T 3qd2_B 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER-------VRIITDV--------------RNLKFPLLFTQKY 299 (332)
T ss_dssp GGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH-------HHHHHHH--------------HTTCCCHHHHHHC
T ss_pred CccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH-------HHHHHHh--------------hccCCCcccccCC
Confidence 999999999999999999999999999999987764311 0000000 0011123334555
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 932 VAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 932 ~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
..+.+++.+||+.||++||+++|+++.
T Consensus 300 ~~~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 300 PQEHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred hhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence 677899999999999999999999864
No 125
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=4.7e-38 Score=347.98 Aligned_cols=253 Identities=19% Similarity=0.281 Sum_probs=206.7
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccch------hHHHHHHHHHHHHhcCCCCceeEEeEeeecccC
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKG------ATKSFVAECEALRNIRHRNLIKIITICSSIDFK 746 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 746 (973)
.++|++.+.||+|+||+||+|++..+|+.||+|+++..... ..+.+.+|+.+++.++||||+++++++..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---- 86 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN---- 86 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC----
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEec----
Confidence 46799999999999999999999999999999999754321 35779999999999999999999998654
Q ss_pred CCceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCC----cEEEec
Q 039720 747 GADFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDM----VAHVSD 822 (973)
Q Consensus 747 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~----~~kl~D 822 (973)
....++||||+++++|.+++......++..++.++.|++.||+|||+. +|+||||||+||+++.++ .+||+|
T Consensus 87 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~D 162 (321)
T 2a2a_A 87 -RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLID 162 (321)
T ss_dssp -SSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred -CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEcc
Confidence 478999999999999999998877788889999999999999999999 999999999999999888 799999
Q ss_pred cccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhh
Q 039720 823 FGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAK 902 (973)
Q Consensus 823 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~ 902 (973)
||+++..... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||......+ . ...
T Consensus 163 fg~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~--~~~ 229 (321)
T 2a2a_A 163 FGLAHEIEDG---------VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE--T--LAN 229 (321)
T ss_dssp CTTCEECCTT---------CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH--H--HHH
T ss_pred CccceecCcc---------ccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHH--H--HHH
Confidence 9999865432 12234568999999999999999999999999999999999999997542211 0 111
Q ss_pred HhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 903 MALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
... .. ...+ .......+..+.+++.+||+.||++|||++|+++.
T Consensus 230 i~~-~~--~~~~---------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 230 ITS-VS--YDFD---------EEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp HHT-TC--CCCC---------HHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred HHh-cc--cccC---------hhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000 00 0000 01112234567889999999999999999999874
No 126
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=3.7e-38 Score=365.23 Aligned_cols=270 Identities=19% Similarity=0.229 Sum_probs=199.8
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecc--cchhHHHHHHHHHHHHhcCCCCceeEEeEeeecc-cCCCc
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLD--KKGATKSFVAECEALRNIRHRNLIKIITICSSID-FKGAD 749 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~~~ 749 (973)
.++|++.+.||+|+||+||+|++..+++.||||++... .....+++.+|+.+++.++||||+++++++.... ..+..
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 46899999999999999999999999999999999754 3344577899999999999999999999976432 13446
Q ss_pred eEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhc
Q 039720 750 FKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 829 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~ 829 (973)
..++||||++++ +.+.+.. ...+..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+..
T Consensus 141 ~~~lv~E~~~~~-l~~~~~~--~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 214 (464)
T 3ttj_A 141 DVYLVMELMDAN-LCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 214 (464)
T ss_dssp EEEEEEECCSEE-HHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC---
T ss_pred eEEEEEeCCCCC-HHHHHhh--cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeeeec
Confidence 789999999865 6666543 367788899999999999999999 9999999999999999999999999999865
Q ss_pred cCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHh-cC-c
Q 039720 830 SHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMA-LP-K 907 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~-~~-~ 907 (973)
.. ........||+.|+|||++.+..|+.++||||+||++|||++|+.||.+....+ .+....... .+ .
T Consensus 215 ~~---------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~-~~~~i~~~lg~p~~ 284 (464)
T 3ttj_A 215 GT---------SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKVIEQLGTPCP 284 (464)
T ss_dssp -----------CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCSCCH
T ss_pred CC---------CcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCH
Confidence 43 222345679999999999999999999999999999999999999997543211 111111100 00 0
Q ss_pred ccccccCc------------------cccccc---CCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 908 KVMGIVDP------------------SLLMEA---RGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 908 ~~~~~~~~------------------~~~~~~---~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
.......+ ...... ............+.+++.+||+.||++|||++|++++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 285 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000 000000 0011122335678899999999999999999999875
No 127
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=348.37 Aligned_cols=253 Identities=22% Similarity=0.303 Sum_probs=197.0
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccc--------------------------hhHHHHHHHHHHHH
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKK--------------------------GATKSFVAECEALR 726 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~~e~~~l~ 726 (973)
.++|++.+.||+|+||+||+|++..+++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999975421 11356889999999
Q ss_pred hcCCCCceeEEeEeeecccCCCceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCC
Q 039720 727 NIRHRNLIKIITICSSIDFKGADFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLK 806 (973)
Q Consensus 727 ~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik 806 (973)
.++||||+++++++... .....++||||+++++|.++... ..+++..++.++.|++.||+|||++ +|+|||||
T Consensus 92 ~l~h~~iv~~~~~~~~~---~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlk 164 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDP---NEDHLYMVFELVNQGPVMEVPTL-KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIK 164 (298)
T ss_dssp TCCCTTBCCEEEEEECS---SSSEEEEEEECCTTCBSCCSSCS-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCC
T ss_pred hCCCCCCCeEEEEEEcC---CCCEEEEEEecCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCC
Confidence 99999999999987642 34789999999999999886543 4567788999999999999999999 99999999
Q ss_pred CCcEEecCCCcEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCCC---CCcccchHHHHHHHHHHHhC
Q 039720 807 PSNVLLDHDMVAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGD---LSMTGDVYSFGILLLEMFTR 883 (973)
Q Consensus 807 ~~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDvwSlG~ll~elltg 883 (973)
|+||+++.++.+||+|||+++..... ........||+.|+|||++.+.. ++.++|||||||++|+|++|
T Consensus 165 p~Nil~~~~~~~kl~Dfg~~~~~~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g 236 (298)
T 2zv2_A 165 PSNLLVGEDGHIKIADFGVSNEFKGS--------DALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFG 236 (298)
T ss_dssp GGGEEECTTSCEEECCCTTCEECSSS--------SCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHS
T ss_pred HHHEEECCCCCEEEecCCCccccccc--------cccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHC
Confidence 99999999999999999999865432 11223457999999999987765 37889999999999999999
Q ss_pred CCCCCCCCCCCccHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 884 RRPTDNMFNDGLTLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 884 ~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
+.||...... .+...... .. .. . ......+..+.+++.+||+.||++||+++|+++.
T Consensus 237 ~~pf~~~~~~--~~~~~~~~---~~----~~--~-------~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 237 QCPFMDERIM--CLHSKIKS---QA----LE--F-------PDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp SCSSCCSSHH--HHHHHHHH---CC----CC--C-------CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred CCCCCCccHH--HHHHHHhc---cc----CC--C-------CCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 9999753211 11111000 00 00 0 0011233467789999999999999999998753
No 128
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.7e-38 Score=343.35 Aligned_cols=247 Identities=25% Similarity=0.345 Sum_probs=182.2
Q ss_pred hcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCce
Q 039720 674 KEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK---KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADF 750 (973)
Q Consensus 674 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 750 (973)
++|++.+.||+|+||+||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++.. ...
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~ 87 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS-----KDE 87 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SSC
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEec-----CCe
Confidence 58999999999999999999999999999999997542 2335678899999999999999999998654 478
Q ss_pred EEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhcc
Q 039720 751 KAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLS 830 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~ 830 (973)
.++||||+ ++++.+++......++.+++.++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||.+....
T Consensus 88 ~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 163 (275)
T 2eue_A 88 IIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163 (275)
T ss_dssp EEEEEECC-CEEHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC----
T ss_pred EEEEehhc-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceecc
Confidence 99999999 678888888877888899999999999999999999 99999999999999999999999999997654
Q ss_pred CCCCccCCCCCcccccccccccccCcccccCCCC-CcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCccc
Q 039720 831 HHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDL-SMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKV 909 (973)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
.. .......||+.|+|||++.+..+ +.++||||+||++|+|++|+.||...... ..........
T Consensus 164 ~~---------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~---- 228 (275)
T 2eue_A 164 DG---------NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP--VLFKNISNGV---- 228 (275)
T ss_dssp --------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTC----
T ss_pred Cc---------ccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCC----
Confidence 32 12234468999999999888766 78999999999999999999999754221 1111000000
Q ss_pred ccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 910 MGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
...+......+.+++.+||+.||++|||++|+++.
T Consensus 229 --------------~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 229 --------------YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp --------------CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred --------------CCCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 00111234457789999999999999999999764
No 129
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.5e-38 Score=346.23 Aligned_cols=257 Identities=25% Similarity=0.437 Sum_probs=210.8
Q ss_pred HhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceE
Q 039720 672 ATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFK 751 (973)
Q Consensus 672 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 751 (973)
..++|++.+.||+|+||+||+|++..++..||+|+++.+. ...+.+.+|+++++.++||||+++++++.. ....
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~ 84 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-----EPPF 84 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECS-----SSSE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEcc-----CCCE
Confidence 4578999999999999999999999899999999997543 355778999999999999999999998643 4778
Q ss_pred EEEEeeccCCCHHHHhhhcC--CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhc
Q 039720 752 AIVYEYMQYGSVDDWLHHTN--DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 829 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~ 829 (973)
++||||+++++|.+++.... ...+..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+...
T Consensus 85 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~ 161 (288)
T 3kfa_A 85 YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 161 (288)
T ss_dssp EEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTS
T ss_pred EEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceec
Confidence 99999999999999998643 366788899999999999999999 9999999999999999999999999999866
Q ss_pred cCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCccHhhhhhHhcCcc
Q 039720 830 SHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHGYAKMALPKK 908 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~ 908 (973)
.... ........+|+.|+|||++.+..++.++||||||+++|+|++ |+.||....... ........
T Consensus 162 ~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~--~~~~~~~~---- 228 (288)
T 3kfa_A 162 TGDT-------YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--VYELLEKD---- 228 (288)
T ss_dssp CSSS-------SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HHHHHHTT----
T ss_pred cCCc-------cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHhcc----
Confidence 4321 222334457889999999998999999999999999999999 999997643221 11111100
Q ss_pred cccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhcc
Q 039720 909 VMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVG 963 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 963 (973)
.. ...+..++..+.+++.+|++.||++||+++|+++.|+++.
T Consensus 229 ----~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~ 270 (288)
T 3kfa_A 229 ----YR---------MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270 (288)
T ss_dssp ----CC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----CC---------CCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHH
Confidence 00 1111233456789999999999999999999999998764
No 130
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=359.32 Aligned_cols=262 Identities=24% Similarity=0.390 Sum_probs=210.0
Q ss_pred hhcCCcCCccccccceeEEEEEECC-------CCcEEEEEEeeccc-chhHHHHHHHHHHHHhc-CCCCceeEEeEeeec
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGE-------DGMSVAVKVMNLDK-KGATKSFVAECEALRNI-RHRNLIKIITICSSI 743 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 743 (973)
.++|.+.+.||+|+||+||+|++.. ++..||||+++... ......+.+|+++++.+ +||||+++++++..
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~- 146 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ- 146 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc-
Confidence 4689999999999999999999753 34689999997553 33457789999999999 89999999998654
Q ss_pred ccCCCceEEEEEeeccCCCHHHHhhhcC----------------CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 039720 744 DFKGADFKAIVYEYMQYGSVDDWLHHTN----------------DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKP 807 (973)
Q Consensus 744 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~----------------~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~ 807 (973)
....++||||+++|+|.+++.... .+++..++.++.|++.||+|||+. +|+||||||
T Consensus 147 ----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp 219 (382)
T 3tt0_A 147 ----DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAA 219 (382)
T ss_dssp ----SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCG
T ss_pred ----CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCc
Confidence 467899999999999999998654 366788999999999999999999 999999999
Q ss_pred CcEEecCCCcEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCC
Q 039720 808 SNVLLDHDMVAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRP 886 (973)
Q Consensus 808 ~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~P 886 (973)
+||+++.++.+||+|||+|+....... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.|
T Consensus 220 ~NIll~~~~~~kL~DFG~a~~~~~~~~------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p 293 (382)
T 3tt0_A 220 RNVLVTEDNVMKIADFGLARDIHHIDY------YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 293 (382)
T ss_dssp GGEEECTTCCEEECSCSCCCCSSCCCT------TCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred ceEEEcCCCcEEEcccCcccccccccc------cccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999986644221 122233457889999999999999999999999999999999 9999
Q ss_pred CCCCCCCCccHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccccc
Q 039720 887 TDNMFNDGLTLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEIF 966 (973)
Q Consensus 887 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 966 (973)
|...... .+....... . ....+..+...+.+++.+||+.||++||+++|+++.|+++....
T Consensus 294 ~~~~~~~--~~~~~~~~~---~--------------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 354 (382)
T 3tt0_A 294 YPGVPVE--ELFKLLKEG---H--------------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT 354 (382)
T ss_dssp STTCCHH--HHHHHHHTT---C--------------CCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred CCCCCHH--HHHHHHHcC---C--------------CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 9754321 111111100 0 01111233456788999999999999999999999999986544
Q ss_pred c
Q 039720 967 I 967 (973)
Q Consensus 967 ~ 967 (973)
.
T Consensus 355 ~ 355 (382)
T 3tt0_A 355 S 355 (382)
T ss_dssp C
T ss_pred h
Confidence 3
No 131
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.8e-38 Score=351.44 Aligned_cols=254 Identities=19% Similarity=0.256 Sum_probs=183.8
Q ss_pred cCCc---CCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcC-CCCceeEEeEeeecccCCCce
Q 039720 675 EFSS---SNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIR-HRNLIKIITICSSIDFKGADF 750 (973)
Q Consensus 675 ~y~~---~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 750 (973)
+|.+ .+.||+|+||+||+|++..+++.||||++... ....+.+|+.+++.+. ||||+++++++.+ ...
T Consensus 9 ~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~-----~~~ 80 (325)
T 3kn6_A 9 HYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHD-----QLH 80 (325)
T ss_dssp HEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----SSE
T ss_pred ccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEc-----CCE
Confidence 4544 37899999999999999999999999999643 3466788999999997 9999999999654 478
Q ss_pred EEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCC---cEEEeccccch
Q 039720 751 KAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDM---VAHVSDFGLAR 827 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~---~~kl~Dfg~a~ 827 (973)
.++||||+++|+|.+++.....+++.++..++.|++.||+|||++ +|+||||||+||+++.++ .+||+|||+++
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~ 157 (325)
T 3kn6_A 81 TFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFAR 157 (325)
T ss_dssp EEEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCE
T ss_pred EEEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccce
Confidence 999999999999999999888888999999999999999999999 999999999999998766 89999999998
Q ss_pred hccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCC--ccHhhhhhHhc
Q 039720 828 FLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDG--LTLHGYAKMAL 905 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~--~~~~~~~~~~~ 905 (973)
..... ........||+.|+|||++.+..++.++||||+||++|+|++|+.||....... ...........
T Consensus 158 ~~~~~--------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~ 229 (325)
T 3kn6_A 158 LKPPD--------NQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIK 229 (325)
T ss_dssp ECCC------------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHT
T ss_pred ecCCC--------CCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHH
Confidence 65432 222334568999999999999999999999999999999999999997653321 11111111100
Q ss_pred CcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 906 PKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
..... ............+.+++.+||+.||++|||++|+++.
T Consensus 230 --------~~~~~---~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 230 --------KGDFS---FEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp --------TTCCC---CCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred --------cCCCC---CCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 00000 0011223345678899999999999999999998854
No 132
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=7.3e-39 Score=359.88 Aligned_cols=246 Identities=26% Similarity=0.301 Sum_probs=192.8
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc---chhHHHHHHHHHH-HHhcCCCCceeEEeEeeecccCCC
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK---KGATKSFVAECEA-LRNIRHRNLIKIITICSSIDFKGA 748 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~~ 748 (973)
.++|++.+.||+|+||+||+|+++.+++.||||+++... ......+..|..+ ++.++||||+++++++.. .
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~-----~ 111 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT-----A 111 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEEC-----S
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEe-----C
Confidence 357999999999999999999999999999999997543 2234456677776 567899999999998643 5
Q ss_pred ceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchh
Q 039720 749 DFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 828 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~ 828 (973)
+..++||||+++|+|.+++...+.+.+..++.++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++.
T Consensus 112 ~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~ 188 (373)
T 2r5t_A 112 DKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKE 188 (373)
T ss_dssp SEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGG
T ss_pred CEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccc
Confidence 78999999999999999999888888888999999999999999999 999999999999999999999999999986
Q ss_pred ccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCcc
Q 039720 829 LSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKK 908 (973)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 908 (973)
.... .......+||+.|+|||++.+..|+.++|||||||++|||++|+.||......+ .+.....
T Consensus 189 ~~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~----~~~~i~~--- 253 (373)
T 2r5t_A 189 NIEH--------NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE----MYDNILN--- 253 (373)
T ss_dssp GBCC--------CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHH----HHHHHHH---
T ss_pred cccC--------CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH----HHHHHHh---
Confidence 4321 223345679999999999999999999999999999999999999997542211 1111110
Q ss_pred cccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 039720 909 VMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTA 954 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 954 (973)
... ..+......+.+++.+||+.||++||++.+
T Consensus 254 ------~~~-------~~~~~~~~~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 254 ------KPL-------QLKPNITNSARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp ------SCC-------CCCSSSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred ------ccc-------CCCCCCCHHHHHHHHHHcccCHHhCCCCCC
Confidence 000 001122345678888999999999999853
No 133
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.1e-38 Score=344.00 Aligned_cols=251 Identities=25% Similarity=0.403 Sum_probs=192.8
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccc----hhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCC
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKK----GATKSFVAECEALRNIRHRNLIKIITICSSIDFKGA 748 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 748 (973)
.++|++.+.||+|+||+||+|++ +++.||||+++.... ...+.+.+|+++++.++||||+++++++.. .
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~ 78 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLK-----E 78 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEE--TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECC-----C
T ss_pred hhheeeeeeeccCCCeEEEEEEE--cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec-----C
Confidence 36899999999999999999998 589999999875432 234678899999999999999999998654 4
Q ss_pred ceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCC---eEecCCCCCcEEecC--------CCc
Q 039720 749 DFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPP---IVHGDLKPSNVLLDH--------DMV 817 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~---ivHrDik~~NILl~~--------~~~ 817 (973)
...++||||+++++|.+++.. ...++..++.++.|++.|++|||++ + |+||||||+||+++. ++.
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH~~---~~~~i~H~dikp~Nil~~~~~~~~~~~~~~ 154 (271)
T 3dtc_A 79 PNLCLVMEFARGGPLNRVLSG-KRIPPDILVNWAVQIARGMNYLHDE---AIVPIIHRDLKSSNILILQKVENGDLSNKI 154 (271)
T ss_dssp --CEEEEECCTTEEHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHS---SSSCCCCSCCSGGGEEESSCCSSSCCSSCC
T ss_pred CceEEEEEcCCCCCHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CCCceeecCCchHHEEEecccccccccCcc
Confidence 678999999999999999864 4667788999999999999999999 7 999999999999986 678
Q ss_pred EEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccH
Q 039720 818 AHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTL 897 (973)
Q Consensus 818 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~ 897 (973)
+||+|||.++..... ......||+.|+|||++.+..++.++||||||+++|+|++|+.||........
T Consensus 155 ~kl~Dfg~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-- 222 (271)
T 3dtc_A 155 LKITDFGLAREWHRT----------TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV-- 222 (271)
T ss_dssp EEECCCCC-----------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHH--
T ss_pred eEEccCCcccccccc----------cccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--
Confidence 999999999865432 12234689999999999999999999999999999999999999975432111
Q ss_pred hhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhc
Q 039720 898 HGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAV 962 (973)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 962 (973)
...... .. . ....+..++..+.+++.+||+.||++|||++|+++.|+++
T Consensus 223 --~~~~~~-~~--------~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 223 --AYGVAM-NK--------L-----ALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp --HHHHHT-SC--------C-----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred --HHhhhc-CC--------C-----CCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 000000 00 0 0111123345678999999999999999999999999864
No 134
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=7.9e-38 Score=340.95 Aligned_cols=253 Identities=25% Similarity=0.338 Sum_probs=204.6
Q ss_pred hcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceE
Q 039720 674 KEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK--KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFK 751 (973)
Q Consensus 674 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 751 (973)
+.|++.+.||+|+||+||+|.+..++..||+|++.... ....+.+.+|+.+++.++||||+++++++... ..+....
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~~~~~~ 104 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST-VKGKKCI 104 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEE-SSSCEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccc-cCCCceE
Confidence 45888899999999999999999999999999997543 33457789999999999999999999987653 3445778
Q ss_pred EEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCcEEec-CCCcEEEeccccchh
Q 039720 752 AIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPP--IVHGDLKPSNVLLD-HDMVAHVSDFGLARF 828 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~--ivHrDik~~NILl~-~~~~~kl~Dfg~a~~ 828 (973)
++||||+++|+|.+++..........++.++.|++.||.|||+. + |+||||||+||+++ .++.+||+|||++..
T Consensus 105 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~ 181 (290)
T 1t4h_A 105 VLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence 99999999999999999877888888999999999999999998 7 99999999999998 789999999999975
Q ss_pred ccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCcc
Q 039720 829 LSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKK 908 (973)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 908 (973)
... .......||+.|+|||++. ..++.++||||+||++|+|++|+.||.................
T Consensus 182 ~~~----------~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~---- 246 (290)
T 1t4h_A 182 KRA----------SFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGV---- 246 (290)
T ss_dssp CCT----------TSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTC----
T ss_pred ccc----------cccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccC----
Confidence 432 2223456899999999876 4589999999999999999999999976433211111110000
Q ss_pred cccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 909 VMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
.+ ..........+.+++.+||+.||++|||++|+++.
T Consensus 247 -----~~--------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 247 -----KP--------ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp -----CC--------GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -----Cc--------cccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 00 01111223467899999999999999999999864
No 135
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=354.10 Aligned_cols=244 Identities=23% Similarity=0.342 Sum_probs=204.0
Q ss_pred HhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccc--------hhHHHHHHHHHHHHhcCCCCceeEEeEeeec
Q 039720 672 ATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKK--------GATKSFVAECEALRNIRHRNLIKIITICSSI 743 (973)
Q Consensus 672 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 743 (973)
..++|++.+.||+|+||+||+|++..+++.||||+++.... .....+.+|+.+++.++||||+++++++..
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~- 100 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN- 100 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC-
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee-
Confidence 45789999999999999999999999999999999975431 123457789999999999999999998654
Q ss_pred ccCCCceEEEEEeeccCC-CHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEec
Q 039720 744 DFKGADFKAIVYEYMQYG-SVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSD 822 (973)
Q Consensus 744 ~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~D 822 (973)
....++||||+.+| +|.+++.......+..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 101 ----~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~D 173 (335)
T 3dls_A 101 ----QGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLID 173 (335)
T ss_dssp ----SSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECC
T ss_pred ----CCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEee
Confidence 47899999999777 9999999888888899999999999999999999 999999999999999999999999
Q ss_pred cccchhccCCCCccCCCCCcccccccccccccCcccccCCCC-CcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhh
Q 039720 823 FGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDL-SMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYA 901 (973)
Q Consensus 823 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~ 901 (973)
||+++..... .......||+.|+|||++.+..+ +.++|||||||++|+|++|+.||......
T Consensus 174 fg~a~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-------- 236 (335)
T 3dls_A 174 FGSAAYLERG---------KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET-------- 236 (335)
T ss_dssp CTTCEECCTT---------CCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG--------
T ss_pred cccceECCCC---------CceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH--------
Confidence 9999866432 22334569999999999988887 88999999999999999999999742110
Q ss_pred hHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 902 KMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
...... .+..+...+.+++.+||+.||++|||++|+++.
T Consensus 237 -----------~~~~~~-------~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 237 -----------VEAAIH-------PPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp -----------TTTCCC-------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred -----------HhhccC-------CCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000 011123457789999999999999999999986
No 136
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.3e-38 Score=365.96 Aligned_cols=248 Identities=27% Similarity=0.382 Sum_probs=205.2
Q ss_pred hcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCce
Q 039720 674 KEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK---KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADF 750 (973)
Q Consensus 674 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 750 (973)
++|.+.+.||+|+||+||+|++..+|+.||||++.... ......+.+|+.+++.++||||+++++++.. ...
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~-----~~~ 90 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIST-----PSD 90 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----SSE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-----CCE
Confidence 57999999999999999999999999999999997542 2235678999999999999999999998654 478
Q ss_pred EEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhcc
Q 039720 751 KAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLS 830 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~ 830 (973)
.++||||+++|+|.+++...+.+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 91 ~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~ 167 (476)
T 2y94_A 91 IFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 167 (476)
T ss_dssp EEEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred EEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhcc
Confidence 999999999999999999888888899999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCccCCCCCcccccccccccccCcccccCCCC-CcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCccc
Q 039720 831 HHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDL-SMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKV 909 (973)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
.. ......+||+.|+|||++.+..+ +.++||||+||++|+|++|+.||...... .+.. ...
T Consensus 168 ~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~--~~~~--~i~----- 229 (476)
T 2y94_A 168 DG---------EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP--TLFK--KIC----- 229 (476)
T ss_dssp TT---------CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH--HHHH--HHH-----
T ss_pred cc---------ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH--HHHH--HHh-----
Confidence 32 22234579999999999988876 78999999999999999999999754321 1111 110
Q ss_pred ccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 910 MGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
+... ..+ ......+.+++.+||+.||++|||++|+++.
T Consensus 230 ----~~~~----~~p---~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 230 ----DGIF----YTP---QYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp ----TTCC----CCC---TTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ----cCCc----CCC---ccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 0000 001 1123456788999999999999999999974
No 137
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=6.2e-39 Score=364.28 Aligned_cols=261 Identities=20% Similarity=0.253 Sum_probs=206.2
Q ss_pred HHHHHHhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCceeEEeEeeec
Q 039720 667 AELSKATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK---KGATKSFVAECEALRNIRHRNLIKIITICSSI 743 (973)
Q Consensus 667 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 743 (973)
.++....++|++.+.||+|+||+||+|+++.+++.||+|+++... ....+.+.+|+.+++.++||||+++++++.+
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~- 140 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD- 140 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC-
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE-
Confidence 344455689999999999999999999999999999999997432 2223457899999999999999999998654
Q ss_pred ccCCCceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEecc
Q 039720 744 DFKGADFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 823 (973)
Q Consensus 744 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Df 823 (973)
....++||||+++|+|.++++.. .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 141 ----~~~~~lV~E~~~gg~L~~~l~~~-~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DF 212 (410)
T 3v8s_A 141 ----DRYLYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADF 212 (410)
T ss_dssp ----SSEEEEEECCCTTEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred ----CCEEEEEEeCCCCCcHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEecc
Confidence 57899999999999999998764 577888999999999999999999 9999999999999999999999999
Q ss_pred ccchhccCCCCccCCCCCcccccccccccccCcccccCCC----CCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhh
Q 039720 824 GLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGD----LSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHG 899 (973)
Q Consensus 824 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~ 899 (973)
|+|+...... .......+||+.|+|||++.+.. |+.++|||||||++|||++|+.||....... .
T Consensus 213 G~a~~~~~~~-------~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~----~ 281 (410)
T 3v8s_A 213 GTCMKMNKEG-------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG----T 281 (410)
T ss_dssp TTCEECCTTS-------EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHH----H
T ss_pred ceeEeeccCC-------cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhh----H
Confidence 9998654321 12233567999999999988765 7899999999999999999999997542211 1
Q ss_pred hhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCC--CCCHHHHHHHH
Q 039720 900 YAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSE--RMQMTAVVKKL 959 (973)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~L 959 (973)
+.... ........ + ........+.+++.+|++.+|++ ||+++||+++-
T Consensus 282 ~~~i~---------~~~~~~~~--p-~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp 331 (410)
T 3v8s_A 282 YSKIM---------NHKNSLTF--P-DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 331 (410)
T ss_dssp HHHHH---------THHHHCCC--C-TTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSG
T ss_pred HHHHH---------hccccccC--C-CcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCc
Confidence 11110 00000000 0 00122345678888999999999 99999999864
No 138
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=5.6e-38 Score=357.25 Aligned_cols=258 Identities=19% Similarity=0.257 Sum_probs=195.9
Q ss_pred hhcCCcC-CccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHH-HhcCCCCceeEEeEeeecccCCCce
Q 039720 673 TKEFSSS-NRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEAL-RNIRHRNLIKIITICSSIDFKGADF 750 (973)
Q Consensus 673 ~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~~~~~~~~~~~~~~~~ 750 (973)
.++|.+. +.||+|+||+||+|++..+++.||||+++.. ..+.+|+.++ +..+||||+++++++... +.+...
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~-~~~~~~ 133 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENL-YAGRKC 133 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeec-ccCCcE
Confidence 3467766 6899999999999999999999999999632 3466788887 455899999999987642 344578
Q ss_pred EEEEEeeccCCCHHHHhhhcC--CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecC---CCcEEEecccc
Q 039720 751 KAIVYEYMQYGSVDDWLHHTN--DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDH---DMVAHVSDFGL 825 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~---~~~~kl~Dfg~ 825 (973)
.++||||+++|+|.+++.... .+.+..++.++.||+.||+|||+. +|+||||||+|||++. ++.+||+|||+
T Consensus 134 ~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~ 210 (400)
T 1nxk_A 134 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGF 210 (400)
T ss_dssp EEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTT
T ss_pred EEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEeccc
Confidence 899999999999999998654 467888999999999999999999 9999999999999997 78999999999
Q ss_pred chhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhc
Q 039720 826 ARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMAL 905 (973)
Q Consensus 826 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~ 905 (973)
++..... .......||+.|+|||++.+..|+.++|||||||++|||++|+.||..................
T Consensus 211 a~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~ 281 (400)
T 1nxk_A 211 AKETTSH---------NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM 281 (400)
T ss_dssp CEECC--------------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHH
T ss_pred ccccCCC---------CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHc
Confidence 9865321 2233557899999999999999999999999999999999999999765432211000001000
Q ss_pred CcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 039720 906 PKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLC 960 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 960 (973)
... ... ......+...+.+++.+||+.||++|||++|++++-.
T Consensus 282 ~~~-------~~~-----~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~ 324 (400)
T 1nxk_A 282 GQY-------EFP-----NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW 324 (400)
T ss_dssp TCC-------CCC-----TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred Ccc-------cCC-----CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcc
Confidence 000 000 0111234456788999999999999999999998643
No 139
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=4.1e-38 Score=366.19 Aligned_cols=207 Identities=23% Similarity=0.295 Sum_probs=162.6
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecc--cchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCce
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLD--KKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADF 750 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 750 (973)
.++|++.+.||+|+||+||+|++..+++.||||++... .....+++.+|+++++.++||||+++++++....+.....
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 36899999999999999999999999999999999643 2334577899999999999999999999987655566678
Q ss_pred EEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhcc
Q 039720 751 KAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLS 830 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~ 830 (973)
.|+||||+. |+|.+++.....+.+..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|+...
T Consensus 132 ~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 207 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207 (458)
T ss_dssp EEEEECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred EEEEEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchhcc
Confidence 999999984 79999998887888899999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCccCC-------------------CCCcccccccccccccCcccc-cCCCCCcccchHHHHHHHHHHHhC
Q 039720 831 HHPFLVAP-------------------EGQSSSIEMKGTIGYIGPEYG-MGGDLSMTGDVYSFGILLLEMFTR 883 (973)
Q Consensus 831 ~~~~~~~~-------------------~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwSlG~ll~elltg 883 (973)
........ .........+||+.|+|||++ .+..|+.++|||||||++|||++|
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp SCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred CccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 32110000 001123456789999999976 566799999999999999999993
No 140
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=3.4e-38 Score=369.02 Aligned_cols=253 Identities=23% Similarity=0.302 Sum_probs=205.3
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCc
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK---KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGAD 749 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 749 (973)
.++|++.+.||+|+||+||+|+++.+|+.||||++.... ......+.+|+++++.++||||+++++++.. ..
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~-----~~ 257 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET-----KD 257 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SS
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEee-----CC
Confidence 467999999999999999999999999999999997532 2345678899999999999999999998643 47
Q ss_pred eEEEEEeeccCCCHHHHhhhcCC--CchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccch
Q 039720 750 FKAIVYEYMQYGSVDDWLHHTND--KLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 827 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~~--~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~ 827 (973)
..++||||++||+|.+++...+. +++..++.++.||+.||+|||++ +|+||||||+|||++.++++||+|||+|+
T Consensus 258 ~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~ 334 (576)
T 2acx_A 258 ALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAV 334 (576)
T ss_dssp EEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccce
Confidence 89999999999999999876543 67888999999999999999999 99999999999999999999999999998
Q ss_pred hccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCc
Q 039720 828 FLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPK 907 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 907 (973)
..... .......||+.|+|||++.+..|+.++|||||||++|||++|+.||......... .........
T Consensus 335 ~~~~~---------~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~-~~i~~~i~~- 403 (576)
T 2acx_A 335 HVPEG---------QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR-EEVERLVKE- 403 (576)
T ss_dssp ECCTT---------CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCH-HHHHHHHHH-
T ss_pred ecccC---------ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhH-HHHHHHhhc-
Confidence 65432 1223457999999999999999999999999999999999999999865432211 111110000
Q ss_pred ccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHHH
Q 039720 908 KVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERM-----QMTAVVKK 958 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 958 (973)
... ..+......+.+++.+||+.||++|| +++|++++
T Consensus 404 -----~~~---------~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 404 -----VPE---------EYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp -----CCC---------CCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred -----ccc---------cCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 000 01122335667888999999999999 78888764
No 141
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=8.7e-39 Score=370.25 Aligned_cols=250 Identities=24% Similarity=0.275 Sum_probs=196.5
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecc---cchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCc
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLD---KKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGAD 749 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 749 (973)
.++|++.+.||+|+||+||+|++..+|+.||||+++.. .......+.+|+.+++.++||||+++++++.. .+
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~-----~~ 221 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT-----HD 221 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEE-----TT
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEee-----CC
Confidence 46799999999999999999999999999999999753 23344567889999999999999999998765 37
Q ss_pred eEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCcEEecCCCcEEEeccccchh
Q 039720 750 FKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHN-HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 828 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~ 828 (973)
..++||||+++|+|.+++.....+++..+..++.||+.||+|||+ . +|+||||||+|||++.++.+||+|||+|+.
T Consensus 222 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~ 298 (446)
T 4ejn_A 222 RLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKE 298 (446)
T ss_dssp EEEEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCT
T ss_pred EEEEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCcee
Confidence 899999999999999999988888889999999999999999998 7 999999999999999999999999999975
Q ss_pred ccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCcc
Q 039720 829 LSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKK 908 (973)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 908 (973)
.... ........||+.|+|||++.+..|+.++|||||||++|||++|+.||...... .+...... ..
T Consensus 299 ~~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~i~~---~~ 365 (446)
T 4ejn_A 299 GIKD--------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFELILM---EE 365 (446)
T ss_dssp TCC-------------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHH---CC
T ss_pred ccCC--------CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--HHHHHHHh---CC
Confidence 4321 22233467999999999999999999999999999999999999999754221 11111100 00
Q ss_pred cccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHHH
Q 039720 909 VMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERM-----QMTAVVKK 958 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 958 (973)
...+......+.+++.+||+.||++|| +++|++++
T Consensus 366 ---------------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 366 ---------------IRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp ---------------CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred ---------------CCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 001112335677899999999999999 99999873
No 142
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1e-38 Score=370.06 Aligned_cols=256 Identities=24% Similarity=0.408 Sum_probs=207.6
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceEE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFKA 752 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 752 (973)
.++|++.+.||+|+||+||+|++. ++..||||+++... ...+.+.+|+.+++.++||||+++++++. .+..+
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~------~~~~~ 258 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT------KEPIY 258 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC------SSSCE
T ss_pred hHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe------CCccE
Confidence 468999999999999999999995 67899999997543 34678999999999999999999999864 25689
Q ss_pred EEEeeccCCCHHHHhhhcC--CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhcc
Q 039720 753 IVYEYMQYGSVDDWLHHTN--DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLS 830 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~ 830 (973)
+||||+.+|+|.++++... ..+...++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 259 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~ 335 (454)
T 1qcf_A 259 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIE 335 (454)
T ss_dssp EEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBC
T ss_pred EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcC
Confidence 9999999999999997542 456677889999999999999999 99999999999999999999999999998754
Q ss_pred CCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCccHhhhhhHhcCccc
Q 039720 831 HHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHGYAKMALPKKV 909 (973)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+ +.......
T Consensus 336 ~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~--~~~~i~~~----- 401 (454)
T 1qcf_A 336 DNE-------YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE--VIRALERG----- 401 (454)
T ss_dssp CHH-------HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HHHHHHHT-----
T ss_pred CCc-------eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcC-----
Confidence 321 011122346778999999998999999999999999999999 999997643221 11111100
Q ss_pred ccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhcccc
Q 039720 910 MGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEI 965 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 965 (973)
. ....+..++..+.++|.+||+.||++|||+++|++.|+++...
T Consensus 402 -------~-----~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 402 -------Y-----RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp -------C-----CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred -------C-----CCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 0 0111233456788999999999999999999999999998653
No 143
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=6.9e-38 Score=340.30 Aligned_cols=253 Identities=20% Similarity=0.311 Sum_probs=205.8
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCce
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK--KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADF 750 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 750 (973)
.++|++.+.||+|+||+||+|.+..+++.||+|++.... ....+.+.+|+.++++++||||+++++++.. ...
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~ 79 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-----ESF 79 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SSE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEc-----CCE
Confidence 468999999999999999999999999999999997543 2344678899999999999999999998654 478
Q ss_pred EEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCc---EEEeccccch
Q 039720 751 KAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMV---AHVSDFGLAR 827 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~---~kl~Dfg~a~ 827 (973)
.++||||+++++|.+.+......++..+..++.|++.|++|||+. +|+||||||+||+++.++. +||+|||.+.
T Consensus 80 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~ 156 (284)
T 3kk8_A 80 HYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156 (284)
T ss_dssp EEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeE
Confidence 899999999999999998888888899999999999999999999 9999999999999986655 9999999997
Q ss_pred hccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCc
Q 039720 828 FLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPK 907 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 907 (973)
..... .......||+.|+|||++.+..++.++||||+|+++|+|++|+.||...... ...........
T Consensus 157 ~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~~~~~~~~~~- 224 (284)
T 3kk8_A 157 EVNDS---------EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--RLYAQIKAGAY- 224 (284)
T ss_dssp ECCSS---------CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCC-
T ss_pred EcccC---------ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh--HHHHHHHhccc-
Confidence 65432 1223456899999999999999999999999999999999999999754321 11111110000
Q ss_pred ccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 908 KVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
... .......+..+.+++.+||+.||++|||++|+++.
T Consensus 225 ---~~~----------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 225 ---DYP----------SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp ---CCC----------TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred ---cCC----------chhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 000 01112234567789999999999999999999874
No 144
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.3e-38 Score=347.72 Aligned_cols=268 Identities=20% Similarity=0.284 Sum_probs=201.5
Q ss_pred hcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccc--hhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceE
Q 039720 674 KEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKK--GATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFK 751 (973)
Q Consensus 674 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 751 (973)
++|++.+.||+|+||+||+|++..+|+.||||++..... ...+.+.+|++++++++||||+++++++.. ....
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~ 77 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRR-----KRRL 77 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----TTEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeec-----CCeE
Confidence 689999999999999999999999999999999865433 235678899999999999999999999765 3789
Q ss_pred EEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhccC
Q 039720 752 AIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLSH 831 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~~ 831 (973)
++||||+++++|.+++......++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+.....
T Consensus 78 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 154 (311)
T 4agu_A 78 HLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTG 154 (311)
T ss_dssp EEEEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EEEEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccC
Confidence 99999999999999988877888889999999999999999999 999999999999999999999999999986543
Q ss_pred CCCccCCCCCcccccccccccccCcccccC-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcC--cc
Q 039720 832 HPFLVAPEGQSSSIEMKGTIGYIGPEYGMG-GDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALP--KK 908 (973)
Q Consensus 832 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~--~~ 908 (973)
. ........||+.|+|||++.+ ..++.++||||+||++|+|++|+.||......+. .......... ..
T Consensus 155 ~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~ 225 (311)
T 4agu_A 155 P--------SDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ-LYLIRKTLGDLIPR 225 (311)
T ss_dssp -------------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCSCCHH
T ss_pred c--------ccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhcccccc
Confidence 2 122234568999999999876 6789999999999999999999999976533211 1111110000 00
Q ss_pred cc------cccC-cccccccCC---CchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 909 VM------GIVD-PSLLMEARG---PSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 909 ~~------~~~~-~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
.. .... ......... ..........+.+++.+||+.||++|||++|+++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 226 HQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp HHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00 0000 000000000 00112344567899999999999999999999864
No 145
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=2.2e-38 Score=345.13 Aligned_cols=260 Identities=28% Similarity=0.440 Sum_probs=196.0
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCce
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK--KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADF 750 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 750 (973)
.++|++.++||+|+||+||+|++. ..||+|+++... ....+.+.+|+++++.++||||+++++++. ...
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~------~~~ 93 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST------APQ 93 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC------SSS
T ss_pred ccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc------CCc
Confidence 468999999999999999999874 359999997553 334567899999999999999999999753 256
Q ss_pred EEEEEeeccCCCHHHHhhhc-CCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhc
Q 039720 751 KAIVYEYMQYGSVDDWLHHT-NDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 829 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~ 829 (973)
.++||||+++++|.+++... ....+..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 94 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 170 (289)
T 3og7_A 94 LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEK 170 (289)
T ss_dssp CEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC-----
T ss_pred cEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceecccc
Confidence 88999999999999999644 4566788899999999999999999 9999999999999999999999999999865
Q ss_pred cCCCCccCCCCCcccccccccccccCccccc---CCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcC
Q 039720 830 SHHPFLVAPEGQSSSIEMKGTIGYIGPEYGM---GGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALP 906 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 906 (973)
.... .........||+.|+|||++. +..++.++||||||+++|+|++|+.||...................
T Consensus 171 ~~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 244 (289)
T 3og7_A 171 SRWS------GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLS 244 (289)
T ss_dssp -------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCC
T ss_pred cccc------ccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccC
Confidence 4321 122233456899999999986 6678999999999999999999999997654322111111111110
Q ss_pred cccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccc
Q 039720 907 KKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGE 964 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 964 (973)
.. . ......++..+.+++.+||+.||++||+++|+++.|+++..
T Consensus 245 ~~--------~------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 245 PD--------L------SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp CC--------T------TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred cc--------h------hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 00 0 11112345678899999999999999999999999998853
No 146
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=3.7e-38 Score=355.15 Aligned_cols=246 Identities=21% Similarity=0.281 Sum_probs=195.4
Q ss_pred CCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceEEEEEeec
Q 039720 679 SNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFKAIVYEYM 758 (973)
Q Consensus 679 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 758 (973)
.+.||+|+||.||+|++..+|+.||+|+++.......+.+.+|++++++++||||+++++++.. ....++||||+
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-----~~~~~lv~E~~ 168 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFES-----KNDIVLVMEYV 168 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----SSEEEEEEECC
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEE-----CCEEEEEEeCC
Confidence 5689999999999999999999999999987665667789999999999999999999998654 47899999999
Q ss_pred cCCCHHHHhhhc-CCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe--cCCCcEEEeccccchhccCCCCc
Q 039720 759 QYGSVDDWLHHT-NDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLL--DHDMVAHVSDFGLARFLSHHPFL 835 (973)
Q Consensus 759 ~~gsL~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl--~~~~~~kl~Dfg~a~~~~~~~~~ 835 (973)
++|+|.+++... ....+..++.++.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||+++......
T Consensus 169 ~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~-- 243 (373)
T 2x4f_A 169 DGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE-- 243 (373)
T ss_dssp TTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC--
T ss_pred CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc--
Confidence 999999988654 3467788899999999999999999 99999999999999 567899999999998764321
Q ss_pred cCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCcccccccCc
Q 039720 836 VAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKVMGIVDP 915 (973)
Q Consensus 836 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (973)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .+......... ..
T Consensus 244 -------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-~~~~i~~~~~~------~~- 308 (373)
T 2x4f_A 244 -------KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE-TLNNILACRWD------LE- 308 (373)
T ss_dssp -------BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHHTCCC------SC-
T ss_pred -------ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhccCC------CC-
Confidence 2223469999999999999999999999999999999999999997543211 11111110000 00
Q ss_pred ccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 039720 916 SLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVK 957 (973)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 957 (973)
..........+.+++.+||+.||++||+++|+++
T Consensus 309 --------~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 309 --------DEEFQDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp --------SGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred --------hhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1111233456788999999999999999999987
No 147
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=2.8e-38 Score=350.27 Aligned_cols=250 Identities=22% Similarity=0.270 Sum_probs=194.5
Q ss_pred hhcCCcCCccccccceeEEEEEEC---CCCcEEEEEEeeccc----chhHHHHHHHHHHHHhcCCCCceeEEeEeeeccc
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLG---EDGMSVAVKVMNLDK----KGATKSFVAECEALRNIRHRNLIKIITICSSIDF 745 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 745 (973)
.++|++.+.||+|+||+||+|++. .+++.||+|+++... ......+.+|+.+++.++||||+++++++..
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--- 92 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQT--- 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEEC---
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEc---
Confidence 368999999999999999999985 689999999997542 2234567889999999999999999998654
Q ss_pred CCCceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEecccc
Q 039720 746 KGADFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 825 (973)
Q Consensus 746 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~ 825 (973)
....++||||+++|+|.+++...+...+..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 93 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 167 (327)
T 3a62_A 93 --GGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGL 167 (327)
T ss_dssp --SSCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSC
T ss_pred --CCEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCc
Confidence 478999999999999999999888888888999999999999999999 999999999999999999999999999
Q ss_pred chhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhc
Q 039720 826 ARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMAL 905 (973)
Q Consensus 826 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~ 905 (973)
++..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||....... .+......
T Consensus 168 ~~~~~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~-- 236 (327)
T 3a62_A 168 CKESIHD--------GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK-TIDKILKC-- 236 (327)
T ss_dssp C------------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHT--
T ss_pred ccccccC--------CccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHhC--
Confidence 9754321 122234579999999999999999999999999999999999999997543211 01010000
Q ss_pred CcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHHH
Q 039720 906 PKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERM-----QMTAVVKK 958 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 958 (973)
. ...+......+.+++.+||+.||++|| +++|++++
T Consensus 237 ----------~-------~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 237 ----------K-------LNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp ----------C-------CCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred ----------C-------CCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 0 000112334567888999999999999 77888764
No 148
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.4e-38 Score=372.47 Aligned_cols=256 Identities=25% Similarity=0.441 Sum_probs=209.3
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceEE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFKA 752 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 752 (973)
..+|++.+.||+|+||+||+|++..++..||||+++.... ..+.+.+|+.++++++||||++++++|.. ....+
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~-----~~~~~ 292 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTR-----EPPFY 292 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-----SSSCE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEec-----CCcEE
Confidence 3578999999999999999999988899999999975433 46779999999999999999999999754 36789
Q ss_pred EEEeeccCCCHHHHhhhcC--CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhcc
Q 039720 753 IVYEYMQYGSVDDWLHHTN--DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLS 830 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~ 830 (973)
+||||+++|+|.+++.... ......++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 293 lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 293 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369 (495)
T ss_dssp EEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCT
T ss_pred EEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceecc
Confidence 9999999999999998643 356677889999999999999999 99999999999999999999999999998654
Q ss_pred CCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCccHhhhhhHhcCccc
Q 039720 831 HHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHGYAKMALPKKV 909 (973)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
... ........+++.|+|||++.+..++.++|||||||++|||++ |+.||...... .+......
T Consensus 370 ~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--~~~~~~~~------ 434 (495)
T 1opk_A 370 GDT-------YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEK------ 434 (495)
T ss_dssp TCC-------EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHHT------
T ss_pred CCc-------eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHc------
Confidence 321 111223346778999999999999999999999999999999 99999765322 11111110
Q ss_pred ccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhcc
Q 039720 910 MGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVG 963 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 963 (973)
.. ....+..++..+.++|.+||+.||++|||++|+++.|+.+.
T Consensus 435 ------~~-----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 435 ------DY-----RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp ------TC-----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred ------CC-----CCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 00 01112334567789999999999999999999999999874
No 149
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2.9e-38 Score=342.31 Aligned_cols=249 Identities=22% Similarity=0.347 Sum_probs=203.1
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCc
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK---KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGAD 749 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 749 (973)
.++|++.+.||+|+||+||+|++..++..||+|++.... ......+.+|+.+++.++||||+++++++.. ..
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~ 82 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD-----AT 82 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----SS
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEec-----CC
Confidence 468999999999999999999999999999999996432 2235678899999999999999999998654 47
Q ss_pred eEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhc
Q 039720 750 FKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 829 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~ 829 (973)
..++||||+++|+|.+++.......+..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++...
T Consensus 83 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~ 159 (279)
T 3fdn_A 83 RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHA 159 (279)
T ss_dssp EEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred EEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccC
Confidence 8999999999999999998888888889999999999999999999 9999999999999999999999999998644
Q ss_pred cCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCccc
Q 039720 830 SHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKV 909 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
.. .......||+.|+|||++.+..++.++||||+|+++|+|++|+.||....... .+......
T Consensus 160 ~~----------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~--- 222 (279)
T 3fdn_A 160 PS----------SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE----TYKRISRV--- 222 (279)
T ss_dssp ------------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH----HHHHHHHT---
T ss_pred Cc----------ccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHH----HHHHHHhC---
Confidence 32 12234568999999999999999999999999999999999999997542211 11111000
Q ss_pred ccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 039720 910 MGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKL 959 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 959 (973)
. ...+......+.+++.+||+.||++||+++|+++.-
T Consensus 223 ----~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~ 259 (279)
T 3fdn_A 223 ----E---------FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP 259 (279)
T ss_dssp ----C---------CCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCH
T ss_pred ----C---------CCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 0 001112334567889999999999999999999754
No 150
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.7e-38 Score=353.69 Aligned_cols=263 Identities=21% Similarity=0.322 Sum_probs=206.9
Q ss_pred HhhcCCcCCccccccceeEEEEEE-----CCCCcEEEEEEeeccc-chhHHHHHHHHHHHHhc-CCCCceeEEeEeeecc
Q 039720 672 ATKEFSSSNRIGKGSFGFVYKGNL-----GEDGMSVAVKVMNLDK-KGATKSFVAECEALRNI-RHRNLIKIITICSSID 744 (973)
Q Consensus 672 ~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 744 (973)
..++|.+.+.||+|+||+||+|++ ..++..||||+++... ....+.+.+|+.+++++ +||||+++++++..
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-- 120 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL-- 120 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS--
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee--
Confidence 347899999999999999999997 3467789999997442 23457789999999999 89999999998654
Q ss_pred cCCCceEEEEEeeccCCCHHHHhhhcCC-----------------------CchhhHHHHHHHHHHHHHHHHhcCCCCeE
Q 039720 745 FKGADFKAIVYEYMQYGSVDDWLHHTND-----------------------KLEVGKLNIVIEVASVIEYLHNHCQPPIV 801 (973)
Q Consensus 745 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~-----------------------~~~~~~~~i~~qi~~aL~~LH~~~~~~iv 801 (973)
....++||||+++|+|.+++..... +++..++.++.|++.||+|||+. +|+
T Consensus 121 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iv 194 (344)
T 1rjb_A 121 ---SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCV 194 (344)
T ss_dssp ---SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred ---CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 4678999999999999999976532 46677889999999999999999 999
Q ss_pred ecCCCCCcEEecCCCcEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHH
Q 039720 802 HGDLKPSNVLLDHDMVAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMF 881 (973)
Q Consensus 802 HrDik~~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ell 881 (973)
||||||+||+++.++.+||+|||++....... .........||+.|+|||++.+..++.++|||||||++|+|+
T Consensus 195 H~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 268 (344)
T 1rjb_A 195 HRDLAARNVLVTHGKVVKICDFGLARDIMSDS------NYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIF 268 (344)
T ss_dssp ETTCSGGGEEEETTTEEEECCCGGGSCGGGCT------TSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHT
T ss_pred cCCCChhhEEEcCCCcEEeCCCccCcccccCc------cceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHH
Confidence 99999999999999999999999998654321 112233456788999999999999999999999999999999
Q ss_pred h-CCCCCCCCCCCCccHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 039720 882 T-RRRPTDNMFNDGLTLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLC 960 (973)
Q Consensus 882 t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 960 (973)
| |+.||........ +....... .. ...+..++..+.+++.+||+.||++||+++|+++.|+
T Consensus 269 t~g~~p~~~~~~~~~-~~~~~~~~--------~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 330 (344)
T 1rjb_A 269 SLGVNPYPGIPVDAN-FYKLIQNG--------FK---------MDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 330 (344)
T ss_dssp TTSCCSSTTCCCSHH-HHHHHHTT--------CC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cCCCCCcccCCcHHH-HHHHHhcC--------CC---------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 8 9999976543221 11111100 00 1111223456778999999999999999999999999
Q ss_pred hccccc
Q 039720 961 AVGEIF 966 (973)
Q Consensus 961 ~~~~~~ 966 (973)
.+....
T Consensus 331 ~~~~~~ 336 (344)
T 1rjb_A 331 CQLADA 336 (344)
T ss_dssp HHC---
T ss_pred HHHHHH
Confidence 886543
No 151
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=4.8e-39 Score=357.01 Aligned_cols=278 Identities=23% Similarity=0.299 Sum_probs=213.0
Q ss_pred hhcCCcCCccccccceeEEEEE----ECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCC
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGN----LGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGA 748 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 748 (973)
.++|++.+.||+|+||+||+|+ +..+++.||||++........+.+.+|+++++.++||||+++++++.. .+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~ 98 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYG---PGR 98 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC---SSS
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEec---CCC
Confidence 3689999999999999999999 467899999999987766667789999999999999999999998653 245
Q ss_pred ceEEEEEeeccCCCHHHHhhhc-CCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccch
Q 039720 749 DFKAIVYEYMQYGSVDDWLHHT-NDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 827 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~ 827 (973)
...++||||+++++|.+++... ....+..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.++
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 175 (327)
T 3lxl_A 99 QSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAK 175 (327)
T ss_dssp CEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCE
T ss_pred ceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccce
Confidence 7789999999999999999863 4567788999999999999999999 99999999999999999999999999998
Q ss_pred hccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCc
Q 039720 828 FLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPK 907 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 907 (973)
....... .........||+.|+|||++.+..++.++|||||||++|+|++|+.||.....+........ ....
T Consensus 176 ~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~--~~~~ 248 (327)
T 3lxl_A 176 LLPLDKD-----YYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCE--RDVP 248 (327)
T ss_dssp ECCTTCS-----EEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC------CC
T ss_pred ecccCCc-----cceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccc--cccc
Confidence 7643221 01122234578889999999999999999999999999999999999864322100000000 0000
Q ss_pred ccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhcccc
Q 039720 908 KVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEI 965 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 965 (973)
....... ..........+..++..+.+++.+||+.||++|||++|+++.|+++...
T Consensus 249 ~~~~~~~--~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 304 (327)
T 3lxl_A 249 ALSRLLE--LLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG 304 (327)
T ss_dssp HHHHHHH--HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---
T ss_pred cHHHHHH--HhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 0000000 0000011122234556788999999999999999999999999988543
No 152
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4e-38 Score=346.47 Aligned_cols=263 Identities=17% Similarity=0.190 Sum_probs=201.4
Q ss_pred HhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccc---hhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCC
Q 039720 672 ATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKK---GATKSFVAECEALRNIRHRNLIKIITICSSIDFKGA 748 (973)
Q Consensus 672 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 748 (973)
..++|++.+.||+|+||+||+|++..+++.||+|++..... ...+.+.+|+.+++.++||||+++++++.. .
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-----~ 106 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEI-----D 106 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-----T
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEee-----C
Confidence 35789999999999999999999999999999999975432 234678999999999999999999998765 3
Q ss_pred ceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchh
Q 039720 749 DFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 828 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~ 828 (973)
...++||||+++++|.+++.......+..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 107 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~ 183 (309)
T 2h34_A 107 GQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASA 183 (309)
T ss_dssp TEEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC---
T ss_pred CeEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcc
Confidence 78999999999999999999887888889999999999999999999 999999999999999999999999999976
Q ss_pred ccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCcc
Q 039720 829 LSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKK 908 (973)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 908 (973)
..... ........||+.|+|||++.+..++.++||||||+++|+|++|+.||...... .+........
T Consensus 184 ~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~--- 251 (309)
T 2h34_A 184 TTDEK-------LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHINQAI--- 251 (309)
T ss_dssp --------------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHHSCC---
T ss_pred ccccc-------cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhccCC---
Confidence 54321 12223456899999999999999999999999999999999999999754221 1111000000
Q ss_pred cccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCC-CHHHHHHHHHhccccc
Q 039720 909 VMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERM-QMTAVVKKLCAVGEIF 966 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~~~~~ 966 (973)
... ......++..+.+++.+||+.||++|| +++++++.|+++....
T Consensus 252 ----~~~--------~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 252 ----PRP--------STVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp ----CCG--------GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred ----CCc--------cccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 000 001122344677899999999999999 9999999999875443
No 153
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=3e-37 Score=359.83 Aligned_cols=348 Identities=27% Similarity=0.376 Sum_probs=212.6
Q ss_pred cccccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEE
Q 039720 156 NWLKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEA 235 (973)
Q Consensus 156 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 235 (973)
.+.+|+.|++++|.++ .+| .+..+++|++|+|++|++++.. . +.++++|++|++++|.+++..+ +.++++|++|
T Consensus 44 ~l~~l~~L~l~~~~i~-~l~-~~~~l~~L~~L~Ls~n~l~~~~-~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L 117 (466)
T 1o6v_A 44 DLDQVTTLQADRLGIK-SID-GVEYLNNLTQINFSNNQLTDIT-P-LKNLTKLVDILMNNNQIADITP--LANLTNLTGL 117 (466)
T ss_dssp HHHTCCEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCCCG-G-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEE
T ss_pred HhccccEEecCCCCCc-cCc-chhhhcCCCEEECCCCccCCch-h-hhccccCCEEECCCCccccChh--hcCCCCCCEE
Confidence 3456677777777766 344 3666777777777777776433 3 7777777777777777765444 6666777777
Q ss_pred EccCCccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceecccccC
Q 039720 236 YLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNL 315 (973)
Q Consensus 236 ~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 315 (973)
++++|+++ .+|. +.++++|++|++++|.+++. + .+.++++|++|+++ |.+.+.. .+..+++|++|++++|.+
T Consensus 118 ~L~~n~l~-~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l 189 (466)
T 1o6v_A 118 TLFNNQIT-DIDP--LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKV 189 (466)
T ss_dssp ECCSSCCC-CCGG--GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCC
T ss_pred ECCCCCCC-CChH--HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcC
Confidence 77777666 3333 33667777777777776643 2 36677777777775 4444332 266666666666666665
Q ss_pred CCCCCCChhhhhhhcccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCccccCCCccccCCCCcCEEEcccccCC
Q 039720 316 GTRTSTDLDFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEIRNLFNLNGLGLEYNQLT 395 (973)
Q Consensus 316 ~~~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 395 (973)
+.++ .+..+++|+.|++++|.+.+ ..| ++.+++|+.|++++|+++
T Consensus 190 ~~~~--------~l~~l~~L~~L~l~~n~l~~-------------------------~~~--~~~l~~L~~L~l~~n~l~ 234 (466)
T 1o6v_A 190 SDIS--------VLAKLTNLESLIATNNQISD-------------------------ITP--LGILTNLDELSLNGNQLK 234 (466)
T ss_dssp CCCG--------GGGGCTTCSEEECCSSCCCC-------------------------CGG--GGGCTTCCEEECCSSCCC
T ss_pred CCCh--------hhccCCCCCEEEecCCcccc-------------------------ccc--ccccCCCCEEECCCCCcc
Confidence 4321 12333333333333333221 111 333445555555555554
Q ss_pred CCCCccccCCCCCCeEEccCcccCCCCCCccCCcCccceEEcCCCccccccccccccccccccccccCcccccCCCcccc
Q 039720 396 GTIPPAIGELRNLQYLGLVGNNIRGIIPDPIGNLTLLNVLQLGFNKLQGSIPSYLGKCQNLMQLSAPNNKLNGTLPPQIF 475 (973)
Q Consensus 396 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 475 (973)
+. ..+..+++|++|++++|++.+..+ +..+++|++|++++|++++..+ +..+++|+
T Consensus 235 ~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~------------------ 290 (466)
T 1o6v_A 235 DI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALT------------------ 290 (466)
T ss_dssp CC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCS------------------
T ss_pred cc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccC------------------
Confidence 32 234455555555555555554332 4445555555555555543222 34444444
Q ss_pred ccccccceeeccCCcccccCCcccccccccceeccccCcccccccccccCccchhhhcccCcccccccccchhhhccCCe
Q 039720 476 GITTLSKLLDLSENHLSGSIPLEVGNLKSLVQLDISRNNFSNEIPVTLSACTTLEYLLMQGNSFNGSIPQSLNALKSIKE 555 (973)
Q Consensus 476 ~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 555 (973)
.|++++|++++..| ++.+++|+.|++++|++++..| +..+++|+.|++++|++++. ..+..+++|+.
T Consensus 291 -------~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~ 357 (466)
T 1o6v_A 291 -------NLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINW 357 (466)
T ss_dssp -------EEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCE
T ss_pred -------eEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCE
Confidence 55555555554333 6677788888888888886655 67788888888888888754 46778888888
Q ss_pred ecCCCCccccccCCCCCCCCccceEeccCCcCcCcC
Q 039720 556 LDLSCNNLSGQIPIHLGNLPFLEYLNLSYNHFEGKV 591 (973)
Q Consensus 556 L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 591 (973)
|++++|++++..| +..+++|+.|++++|++++.+
T Consensus 358 L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~~p 391 (466)
T 1o6v_A 358 LSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAP 391 (466)
T ss_dssp EECCSSCCCBCGG--GTTCTTCCEEECCCEEEECCC
T ss_pred EeCCCCccCccch--hhcCCCCCEEeccCCcccCCc
Confidence 8888888887766 788888888888888888753
No 154
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.4e-37 Score=343.71 Aligned_cols=277 Identities=26% Similarity=0.365 Sum_probs=206.9
Q ss_pred HHHhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhc--CCCCceeEEeEeeecccCC
Q 039720 670 SKATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNI--RHRNLIKIITICSSIDFKG 747 (973)
Q Consensus 670 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~~~~~~~~~~~~~ 747 (973)
....++|++.+.||+|+||+||+|++ +++.||||++.... ......|.+++... +||||+++++++... ...
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~-~~~ 106 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKW--RGEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKG-TGS 106 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEES-CGG
T ss_pred cccccceEEEeEeecCCCeEEEEEEE--CCceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccC-CCC
Confidence 34567999999999999999999998 58999999996432 34445566665554 899999999987653 222
Q ss_pred CceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcC-----CCCeEecCCCCCcEEecCCCcEEEec
Q 039720 748 ADFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHC-----QPPIVHGDLKPSNVLLDHDMVAHVSD 822 (973)
Q Consensus 748 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-----~~~ivHrDik~~NILl~~~~~~kl~D 822 (973)
....++||||+++|+|.+++... ...+..++.++.|++.||+|||+.+ .++|+||||||+||+++.++.+||+|
T Consensus 107 ~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~D 185 (337)
T 3mdy_A 107 WTQLYLITDYHENGSLYDYLKST-TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIAD 185 (337)
T ss_dssp GCEEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECC
T ss_pred CCceEEEEeccCCCcHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEe
Confidence 36789999999999999999764 5777889999999999999999752 33899999999999999999999999
Q ss_pred cccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcc------cchHHHHHHHHHHHhC----------CCC
Q 039720 823 FGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMT------GDVYSFGILLLEMFTR----------RRP 886 (973)
Q Consensus 823 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~------sDvwSlG~ll~elltg----------~~P 886 (973)
||+++....... ..........||+.|+|||++.+..+..+ +|||||||++|||++| +.|
T Consensus 186 fg~a~~~~~~~~----~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p 261 (337)
T 3mdy_A 186 LGLAVKFISDTN----EVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLP 261 (337)
T ss_dssp CTTCEECC-------------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred CCCceeeccccc----cccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccccc
Confidence 999976543221 00111224569999999999988776665 9999999999999999 666
Q ss_pred CCCCCCCCccHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhcccc
Q 039720 887 TDNMFNDGLTLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEI 965 (973)
Q Consensus 887 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 965 (973)
|..................... ..+.. .......+++..+.+++.+||+.||++|||++|+++.|+++.+.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~----~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~ 332 (337)
T 3mdy_A 262 YHDLVPSDPSYEDMREIVCIKK----LRPSF----PNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES 332 (337)
T ss_dssp TTTTSCSSCCHHHHHHHHTTSC----CCCCC----CGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HhhhcCCCCchhhhHHHHhhhc----cCccc----cccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhh
Confidence 6554443332222222211111 11111 11112346788899999999999999999999999999988643
No 155
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=2.9e-38 Score=348.43 Aligned_cols=260 Identities=22% Similarity=0.361 Sum_probs=209.1
Q ss_pred hhcCCcCCccccccceeEEEEEE-----CCCCcEEEEEEeecccc-hhHHHHHHHHHHHHhc-CCCCceeEEeEeeeccc
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNL-----GEDGMSVAVKVMNLDKK-GATKSFVAECEALRNI-RHRNLIKIITICSSIDF 745 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 745 (973)
.++|++.+.||+|+||+||+|++ ..+++.||||+++.... ...+.+.+|+.+++++ +||||+++++++..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~--- 98 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI--- 98 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS---
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec---
Confidence 46899999999999999999985 45778999999975543 3457789999999999 89999999998654
Q ss_pred CCCceEEEEEeeccCCCHHHHhhhcC------------------CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 039720 746 KGADFKAIVYEYMQYGSVDDWLHHTN------------------DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKP 807 (973)
Q Consensus 746 ~~~~~~~lv~e~~~~gsL~~~l~~~~------------------~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~ 807 (973)
....++||||+++|+|.+++.... ...+..++.++.|++.||+|||+. +|+||||||
T Consensus 99 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp 173 (313)
T 1t46_A 99 --GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAA 173 (313)
T ss_dssp --SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred --CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCcc
Confidence 467899999999999999998654 256788899999999999999999 999999999
Q ss_pred CcEEecCCCcEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCC
Q 039720 808 SNVLLDHDMVAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRP 886 (973)
Q Consensus 808 ~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~P 886 (973)
+||+++.++.+||+|||+++...... .........+|+.|+|||++.+..++.++||||||+++|+|++ |+.|
T Consensus 174 ~Nil~~~~~~~kl~Dfg~~~~~~~~~------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p 247 (313)
T 1t46_A 174 RNILLTHGRITKICDFGLARDIKNDS------NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 247 (313)
T ss_dssp GGEEEETTTEEEECCCGGGSCTTSCT------TSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCS
T ss_pred ceEEEcCCCCEEEccccccccccccc------cceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999998664322 1112223457889999999999999999999999999999999 9999
Q ss_pred CCCCCCCCccHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccc
Q 039720 887 TDNMFNDGLTLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGE 964 (973)
Q Consensus 887 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 964 (973)
|........ ......... . ...+...+..+.+++.+||+.||++|||++|+++.|+++..
T Consensus 248 ~~~~~~~~~-~~~~~~~~~--------~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 307 (313)
T 1t46_A 248 YPGMPVDSK-FYKMIKEGF--------R---------MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307 (313)
T ss_dssp STTCCSSHH-HHHHHHHTC--------C---------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCcccchhH-HHHHhccCC--------C---------CCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 976543321 111111100 0 00112234567789999999999999999999999998743
No 156
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=3.7e-38 Score=343.15 Aligned_cols=266 Identities=22% Similarity=0.356 Sum_probs=198.3
Q ss_pred hcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccc--hhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceE
Q 039720 674 KEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKK--GATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFK 751 (973)
Q Consensus 674 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 751 (973)
++|++.+.||+|+||+||+|++ .+|+.||+|+++.... ...+.+.+|+++++.++||||+++++++.. ....
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~ 75 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT-----KKRL 75 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEEC-----SSCE
T ss_pred ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEcc-----CCeE
Confidence 5799999999999999999999 5899999999975432 234678899999999999999999998654 4789
Q ss_pred EEEEeeccCCCHHHHhhhc-CCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhcc
Q 039720 752 AIVYEYMQYGSVDDWLHHT-NDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLS 830 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~ 830 (973)
++||||+.+ +|.+++... +...+..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 76 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 151 (288)
T 1ob3_A 76 VLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFG 151 (288)
T ss_dssp EEEEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHC
T ss_pred EEEEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccC
Confidence 999999985 899888764 5567788899999999999999999 99999999999999999999999999998764
Q ss_pred CCCCccCCCCCcccccccccccccCcccccCC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHh-cCc-
Q 039720 831 HHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGG-DLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMA-LPK- 907 (973)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~-~~~- 907 (973)
.. ........||+.|+|||++.+. .++.++||||+||++|||++|+.||......+. +....... .+.
T Consensus 152 ~~--------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~ 222 (288)
T 1ob3_A 152 IP--------VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ-LMRIFRILGTPNS 222 (288)
T ss_dssp C-----------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCT
T ss_pred cc--------ccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHHCCCCh
Confidence 32 1122344689999999998764 589999999999999999999999976432211 11111110 000
Q ss_pred -c---ccc--ccCcccccccCC--CchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 908 -K---VMG--IVDPSLLMEARG--PSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 908 -~---~~~--~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
. ... ..++........ ..........+.+++.+||+.||++|||++|+++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 223 KNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp TTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0 000 001111000000 01112234567789999999999999999999864
No 157
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=4e-38 Score=368.86 Aligned_cols=348 Identities=22% Similarity=0.198 Sum_probs=223.8
Q ss_pred EEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccCCccccCCCcccccCCCCCcEEEccCC
Q 039720 186 TFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQN 265 (973)
Q Consensus 186 ~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N 265 (973)
.++.+++.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.+++..|..+ .++++|++|+|++|
T Consensus 15 ~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~-~~l~~L~~L~L~~n 90 (477)
T 2id5_A 15 AVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAF-NNLFNLRTLGLRSN 90 (477)
T ss_dssp EEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTT-TTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhh-hCCccCCEEECCCC
Confidence 3444444444 3443332 344455555555544444444444444444444444432222222 25666677777777
Q ss_pred cccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceecccccCCCCCCCChhhhhhhcccccceeeccccccc
Q 039720 266 NLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNLGTRTSTDLDFITLLTNCSKLVKLGLVFNRF 345 (973)
Q Consensus 266 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~N~l 345 (973)
.++...+..|.++++|++|+|++|++++..+..|..+++|++|+|++|.+..
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~---------------------------- 142 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVY---------------------------- 142 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCE----------------------------
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccce----------------------------
Confidence 7765555566667777777777776666666666666666666666555432
Q ss_pred cCCCChhhhhhhhhhhHhhhcCCccccCCCccccCCCCcCEEEcccccCCCCCCccccCCCCCCeEEccCcccCCCCCCc
Q 039720 346 GGALPHSIANLSTTMTLIAMAGNQISGTIPPEIRNLFNLNGLGLEYNQLTGTIPPAIGELRNLQYLGLVGNNIRGIIPDP 425 (973)
Q Consensus 346 ~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 425 (973)
..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|.+.+..+..
T Consensus 143 ---------------------------~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~ 195 (477)
T 2id5_A 143 ---------------------------ISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYS 195 (477)
T ss_dssp ---------------------------ECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTC
T ss_pred ---------------------------eChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhh
Confidence 23344555666666666666666555556666666666666666666655556
Q ss_pred cCCcCccceEEcCCCccccccccccccccccccccccCcccccCCCccccccccccceeeccCCcccccCCccccccccc
Q 039720 426 IGNLTLLNVLQLGFNKLQGSIPSYLGKCQNLMQLSAPNNKLNGTLPPQIFGITTLSKLLDLSENHLSGSIPLEVGNLKSL 505 (973)
Q Consensus 426 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L 505 (973)
|..+++|++|++++|.+.+.+|.......+|+ .|++++|++++..+..+..+++|
T Consensus 196 ~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~-------------------------~L~l~~n~l~~~~~~~~~~l~~L 250 (477)
T 2id5_A 196 FKRLYRLKVLEISHWPYLDTMTPNCLYGLNLT-------------------------SLSITHCNLTAVPYLAVRHLVYL 250 (477)
T ss_dssp SCSCTTCCEEEEECCTTCCEECTTTTTTCCCS-------------------------EEEEESSCCCSCCHHHHTTCTTC
T ss_pred cccCcccceeeCCCCccccccCcccccCcccc-------------------------EEECcCCcccccCHHHhcCcccc
Confidence 66666666666666655544444333333333 56666666664444567788889
Q ss_pred ceeccccCcccccccccccCccchhhhcccCcccccccccchhhhccCCeecCCCCccccccCCCCCCCCccceEeccCC
Q 039720 506 VQLDISRNNFSNEIPVTLSACTTLEYLLMQGNSFNGSIPQSLNALKSIKELDLSCNNLSGQIPIHLGNLPFLEYLNLSYN 585 (973)
Q Consensus 506 ~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N 585 (973)
+.|+|++|++++..+..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 251 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 330 (477)
T 2id5_A 251 RFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSN 330 (477)
T ss_dssp CEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSS
T ss_pred CeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCC
Confidence 99999999988777778888899999999999998888888889999999999999998766677888999999999999
Q ss_pred cCcCcCCCCCCCCCccccccccCccccCCCCC
Q 039720 586 HFEGKVPKKGVFSNETRISLTGNEQFCGGLGE 617 (973)
Q Consensus 586 ~l~~~~p~~~~~~~~~~l~~~~N~~~cg~~~~ 617 (973)
++.+..+....+.......+.++...|++|..
T Consensus 331 ~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p~~ 362 (477)
T 2id5_A 331 PLACDCRLLWVFRRRWRLNFNRQQPTCATPEF 362 (477)
T ss_dssp CEECSGGGHHHHTTTTSSCCTTCCCBEEESGG
T ss_pred CccCccchHhHHhhhhccccCccCceeCCchH
Confidence 98876554322333445667788888887654
No 158
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=2.7e-38 Score=348.69 Aligned_cols=267 Identities=24% Similarity=0.404 Sum_probs=199.8
Q ss_pred HhhcCCcCCccccccceeEEEEEECC---CCcEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccC
Q 039720 672 ATKEFSSSNRIGKGSFGFVYKGNLGE---DGMSVAVKVMNLDK--KGATKSFVAECEALRNIRHRNLIKIITICSSIDFK 746 (973)
Q Consensus 672 ~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 746 (973)
..++|.+.+.||+|+||+||+|++.. ++..||+|+++... ....+.+.+|+.++++++||||+++++++......
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 45789999999999999999998865 45689999997543 33456789999999999999999999998764333
Q ss_pred CCceEEEEEeeccCCCHHHHhhh------cCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEE
Q 039720 747 GADFKAIVYEYMQYGSVDDWLHH------TNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHV 820 (973)
Q Consensus 747 ~~~~~~lv~e~~~~gsL~~~l~~------~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl 820 (973)
.....++||||+++|+|.+++.. ....++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||
T Consensus 112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl 188 (313)
T 3brb_A 112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCV 188 (313)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEE
T ss_pred CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEE
Confidence 33467999999999999999842 34566788999999999999999999 9999999999999999999999
Q ss_pred eccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCccHhh
Q 039720 821 SDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHG 899 (973)
Q Consensus 821 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~~~~~~~~ 899 (973)
+|||+++...... .........+++.|+|||++.+..++.++||||||+++|+|++ |+.||....... ...
T Consensus 189 ~Dfg~~~~~~~~~------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~ 260 (313)
T 3brb_A 189 ADFGLSKKIYSGD------YYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE--MYD 260 (313)
T ss_dssp CSCSCC----------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HHH
T ss_pred eecCcceeccccc------ccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH--HHH
Confidence 9999998654321 1122233457889999999999999999999999999999999 999987643321 111
Q ss_pred hhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccccc
Q 039720 900 YAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEIF 966 (973)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 966 (973)
..... . ....+..++..+.+++.+||+.||++||+++|+++.|+++.+.+
T Consensus 261 ~~~~~--------~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l 310 (313)
T 3brb_A 261 YLLHG--------H---------RLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310 (313)
T ss_dssp HHHTT--------C---------CCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred HHHcC--------C---------CCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 10000 0 01112234456789999999999999999999999999886543
No 159
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=3.3e-38 Score=351.16 Aligned_cols=255 Identities=23% Similarity=0.304 Sum_probs=201.5
Q ss_pred HhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhc-CCCCceeEEeEeeecccCCCce
Q 039720 672 ATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNI-RHRNLIKIITICSSIDFKGADF 750 (973)
Q Consensus 672 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 750 (973)
..++|++.+.||+|+||+||+|+++.+++.||||++...... ..+|++++.++ +||||+++++++.+ ...
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~-----~~~ 90 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDD-----GKY 90 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEEC-----SSE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEc-----CCE
Confidence 356899999999999999999999999999999999755432 34688888887 79999999998643 578
Q ss_pred EEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCC----CcEEEeccccc
Q 039720 751 KAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHD----MVAHVSDFGLA 826 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~----~~~kl~Dfg~a 826 (973)
.++||||+++|+|.+++...+.+.+..+..++.||+.||+|||++ +|+||||||+||++..+ +.+||+|||++
T Consensus 91 ~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a 167 (342)
T 2qr7_A 91 VYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFA 167 (342)
T ss_dssp EEEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTC
T ss_pred EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCc
Confidence 999999999999999998888888899999999999999999999 99999999999998543 35999999999
Q ss_pred hhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcC
Q 039720 827 RFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALP 906 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 906 (973)
+..... ........||+.|+|||++.+..|+.++|||||||++|||++|+.||....... ..........
T Consensus 168 ~~~~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~~~~i~~ 237 (342)
T 2qr7_A 168 KQLRAE--------NGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT--PEEILARIGS 237 (342)
T ss_dssp EECBCT--------TCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSC--HHHHHHHHHH
T ss_pred ccCcCC--------CCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCC--HHHHHHHHcc
Confidence 865432 122334578999999999988889999999999999999999999997543221 1111111000
Q ss_pred cccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 039720 907 KKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKL 959 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 959 (973)
.. . ... ...+......+.+++.+||+.||++||+++|++++-
T Consensus 238 ~~----~--~~~-----~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp 279 (342)
T 2qr7_A 238 GK----F--SLS-----GGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHP 279 (342)
T ss_dssp CC----C--CCC-----STTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSH
T ss_pred CC----c--ccC-----ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCC
Confidence 00 0 000 011123345677899999999999999999998753
No 160
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=5.8e-38 Score=346.60 Aligned_cols=274 Identities=20% Similarity=0.259 Sum_probs=201.3
Q ss_pred hhcCCcC-CccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhc-CCCCceeEEeEeeecccCCCce
Q 039720 673 TKEFSSS-NRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNI-RHRNLIKIITICSSIDFKGADF 750 (973)
Q Consensus 673 ~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 750 (973)
.++|.+. +.||+|+||+||+|++..+++.||||++........+.+.+|++++.++ +||||+++++++.. .+.
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~-----~~~ 85 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEE-----EDR 85 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-----TTE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEee-----CCE
Confidence 3578885 7899999999999999999999999999866655677899999999985 79999999999765 478
Q ss_pred EEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCc---EEEeccccch
Q 039720 751 KAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMV---AHVSDFGLAR 827 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~---~kl~Dfg~a~ 827 (973)
.++||||+++|+|.+++......++..++.++.|++.||+|||++ +|+||||||+||+++.++. +||+|||++.
T Consensus 86 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~ 162 (316)
T 2ac3_A 86 FYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGS 162 (316)
T ss_dssp EEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC
T ss_pred EEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCcc
Confidence 999999999999999999888888889999999999999999999 9999999999999998776 9999999997
Q ss_pred hccCCCCccCCCCCcccccccccccccCcccccC-----CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhh
Q 039720 828 FLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMG-----GDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAK 902 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~ 902 (973)
......... ...........||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+........
T Consensus 163 ~~~~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 241 (316)
T 2ac3_A 163 GIKLNGDCS-PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEA 241 (316)
T ss_dssp --------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----C
T ss_pred ccccCCccc-cccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccccccccc
Confidence 653221000 001112223469999999999875 56789999999999999999999999865432211000000
Q ss_pred -HhcCcccccccCcccccccCCCc-hhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 903 -MALPKKVMGIVDPSLLMEARGPS-KFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 903 -~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
..........+.. .....+. .....+..+.+++.+||+.||++|||++|+++.
T Consensus 242 ~~~~~~~~~~~i~~---~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 242 CPACQNMLFESIQE---GKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp CHHHHHHHHHHHHH---CCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred chhHHHHHHHHHhc---cCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 0000000000000 0000010 011234567899999999999999999999884
No 161
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.8e-38 Score=342.34 Aligned_cols=253 Identities=23% Similarity=0.362 Sum_probs=203.9
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCce
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK--KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADF 750 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 750 (973)
.++|++.+.||+|+||+||+|++ +++.||||+++... ....+.+.+|+.++++++||||+++++++... ....
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~~ 83 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRW--QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSP---PAPH 83 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTT---TSSS
T ss_pred HHHhHHHHHhcCCCcceEEEEEE--CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccC---CCCC
Confidence 36899999999999999999999 58999999997653 33456799999999999999999999987532 2367
Q ss_pred EEEEEeeccCCCHHHHhhhcCC--CchhhHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCcEEecCCCcEEEeccccc
Q 039720 751 KAIVYEYMQYGSVDDWLHHTND--KLEVGKLNIVIEVASVIEYLHNHCQPP--IVHGDLKPSNVLLDHDMVAHVSDFGLA 826 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~~--~~~~~~~~i~~qi~~aL~~LH~~~~~~--ivHrDik~~NILl~~~~~~kl~Dfg~a 826 (973)
.++||||+++|+|.+++..... .++..++.++.|++.||.|||+. + |+||||||+||+++.++.++++|||++
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~ 160 (271)
T 3kmu_A 84 PTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVK 160 (271)
T ss_dssp CEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSC
T ss_pred eEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccce
Confidence 8999999999999999987653 67788999999999999999998 7 999999999999999999999999987
Q ss_pred hhccCCCCccCCCCCcccccccccccccCcccccCCCCCc---ccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhH
Q 039720 827 RFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSM---TGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKM 903 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~ 903 (973)
..... ....||+.|+|||++.+..++. ++|||||||++|||++|+.||........ ....
T Consensus 161 ~~~~~-------------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~----~~~~ 223 (271)
T 3kmu_A 161 FSFQS-------------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI----GMKV 223 (271)
T ss_dssp CTTSC-------------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH----HHHH
T ss_pred eeecc-------------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH----HHHH
Confidence 64321 1345899999999988765544 79999999999999999999975432211 0000
Q ss_pred hcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccc
Q 039720 904 ALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGE 964 (973)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 964 (973)
.. .... +..+..++..+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 224 ~~-----~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 224 AL-----EGLR---------PTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HH-----SCCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred Hh-----cCCC---------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 00 0000 11112334567889999999999999999999999998864
No 162
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=7.1e-38 Score=338.66 Aligned_cols=255 Identities=22% Similarity=0.310 Sum_probs=208.3
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK-KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFK 751 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 751 (973)
.++|++.+.||+|+||+||+|++..+++.||||++.... ....+.+.+|+.+++.++||||+++++++.. ....
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 80 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE-----GNIQ 80 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-----TTEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEc-----CCEE
Confidence 468999999999999999999999999999999997543 3345778999999999999999999998764 3788
Q ss_pred EEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhccC
Q 039720 752 AIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLSH 831 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~~ 831 (973)
++||||+++++|.+++......++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+.....
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 157 (276)
T 2yex_A 81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRY 157 (276)
T ss_dssp EEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred EEEEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCC
Confidence 99999999999999998877788888999999999999999999 999999999999999999999999999976532
Q ss_pred CCCccCCCCCcccccccccccccCcccccCCCC-CcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCcccc
Q 039720 832 HPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDL-SMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKVM 910 (973)
Q Consensus 832 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
.. .........||+.|+|||++.+..+ +.++||||||+++|+|++|+.||............+......
T Consensus 158 ~~------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---- 227 (276)
T 2yex_A 158 NN------RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY---- 227 (276)
T ss_dssp TT------EECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTT----
T ss_pred Cc------chhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccc----
Confidence 21 0112234568999999999988775 788999999999999999999998654433222222111000
Q ss_pred cccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 911 GIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
.......+..+.+++.+||+.||++|||++|+++.
T Consensus 228 -------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 228 -------------LNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp -------------STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -------------cCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 01112234567789999999999999999999874
No 163
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2.9e-38 Score=342.76 Aligned_cols=257 Identities=22% Similarity=0.359 Sum_probs=203.3
Q ss_pred hhcCCcCCccccccceeEEEEEECC---CCcEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCC
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGE---DGMSVAVKVMNLDK-KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGA 748 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 748 (973)
.++|++.+.||+|+||+||+|++.. ++..||+|+++... ....+.+.+|+.+++.++||||+++++++..
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------ 84 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE------ 84 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS------
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC------
Confidence 4689999999999999999998753 34569999997553 3356779999999999999999999998643
Q ss_pred ceEEEEEeeccCCCHHHHhhhcC-CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccch
Q 039720 749 DFKAIVYEYMQYGSVDDWLHHTN-DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 827 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~ 827 (973)
...++||||+++++|.+++.... ...+..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+.
T Consensus 85 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 161 (281)
T 3cc6_A 85 EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSR 161 (281)
T ss_dssp SSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGG
T ss_pred CCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCc
Confidence 45689999999999999997654 467788899999999999999999 99999999999999999999999999998
Q ss_pred hccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCccHhhhhhHhcC
Q 039720 828 FLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHGYAKMALP 906 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~ 906 (973)
...... ........+|+.|+|||++.+..++.++||||||+++|+|++ |+.||....... ..........
T Consensus 162 ~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~--~~~~~~~~~~ 232 (281)
T 3cc6_A 162 YIEDED-------YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD--VIGVLEKGDR 232 (281)
T ss_dssp CC----------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG--HHHHHHHTCC
T ss_pred cccccc-------ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH--HHHHHhcCCC
Confidence 654321 112223457889999999998999999999999999999998 999997543321 1111111000
Q ss_pred cccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccc
Q 039720 907 KKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGE 964 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 964 (973)
...+..++..+.+++.+||+.||++||+++|+++.|+++..
T Consensus 233 -----------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 273 (281)
T 3cc6_A 233 -----------------LPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 273 (281)
T ss_dssp -----------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----------------CCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence 01112234567789999999999999999999999998753
No 164
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.5e-37 Score=339.91 Aligned_cols=271 Identities=18% Similarity=0.226 Sum_probs=210.9
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceEE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFKA 752 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 752 (973)
.++|++.+.||+|+||+||+|++..+++.||||++..... .+.+.+|+.+++.++|++++..+.++.. .....+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~----~~~~~~ 81 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGA----EGDYNV 81 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEE----ETTEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccC----CCCceE
Confidence 4689999999999999999999999999999999875433 3458899999999999888877776543 347889
Q ss_pred EEEeeccCCCHHHHhhh-cCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe---cCCCcEEEeccccchh
Q 039720 753 IVYEYMQYGSVDDWLHH-TNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLL---DHDMVAHVSDFGLARF 828 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl---~~~~~~kl~Dfg~a~~ 828 (973)
+||||+ +++|.+++.. ....++..++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||.++.
T Consensus 82 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~ 157 (296)
T 3uzp_A 82 MVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred EEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccc
Confidence 999999 8999999974 44567888999999999999999999 99999999999999 4888999999999987
Q ss_pred ccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCC--ccHhhhhhHhcC
Q 039720 829 LSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDG--LTLHGYAKMALP 906 (973)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~--~~~~~~~~~~~~ 906 (973)
......... ..........||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..+.........
T Consensus 158 ~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 236 (296)
T 3uzp_A 158 YRDARTHQH-IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS 236 (296)
T ss_dssp CBCTTTCCB-CCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHH
T ss_pred ccccccccc-cccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccC
Confidence 654321000 00112334579999999999999999999999999999999999999998653321 111111111100
Q ss_pred cccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccccccC
Q 039720 907 KKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEIFIG 968 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 968 (973)
... ......++..+.+++.+||+.||++||+++|+++.|+++......
T Consensus 237 ~~~--------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 284 (296)
T 3uzp_A 237 TPI--------------EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp SCH--------------HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred Cch--------------HHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCC
Confidence 000 000122345678999999999999999999999999988654433
No 165
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6.3e-38 Score=350.92 Aligned_cols=262 Identities=20% Similarity=0.266 Sum_probs=201.0
Q ss_pred HHHHhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc-----chhHHHHHHHHHHHHhcCCCCceeEEeEeeec
Q 039720 669 LSKATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK-----KGATKSFVAECEALRNIRHRNLIKIITICSSI 743 (973)
Q Consensus 669 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 743 (973)
+....++|++.+.||+|+||+||+|++..+++.||+|++.... ....+.+.+|+++++.++||||+++++++..
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~- 99 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED- 99 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc-
Confidence 3456679999999999999999999999999999999997442 3445789999999999999999999999754
Q ss_pred ccCCCceEEEEEeeccCCCHHHHhhhcC----------------------------------------CCchhhHHHHHH
Q 039720 744 DFKGADFKAIVYEYMQYGSVDDWLHHTN----------------------------------------DKLEVGKLNIVI 783 (973)
Q Consensus 744 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~----------------------------------------~~~~~~~~~i~~ 783 (973)
....++||||+++|+|.+++.... ...+..++.++.
T Consensus 100 ----~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 175 (345)
T 3hko_A 100 ----EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMR 175 (345)
T ss_dssp ----SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHH
T ss_pred ----CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHH
Confidence 478999999999999999985210 113455778999
Q ss_pred HHHHHHHHHHhcCCCCeEecCCCCCcEEecCCC--cEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccC
Q 039720 784 EVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDM--VAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMG 861 (973)
Q Consensus 784 qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 861 (973)
|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++.+.... ...........||+.|+|||++.+
T Consensus 176 qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~~~~~~gt~~y~aPE~~~~ 248 (345)
T 3hko_A 176 QIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLN----NGEYYGMTTKAGTPYFVAPEVLNT 248 (345)
T ss_dssp HHHHHHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTT----CC--------CCCGGGCCHHHHTC
T ss_pred HHHHHHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccC----ccccccccccCCCccccCchhhcc
Confidence 999999999999 999999999999998776 89999999998654321 011112334569999999999875
Q ss_pred --CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHh
Q 039720 862 --GDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGV 939 (973)
Q Consensus 862 --~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 939 (973)
..++.++|||||||++|||++|+.||......+. ....... .... ...........+.+++.
T Consensus 249 ~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~------------~~~~---~~~~~~~~~~~~~~li~ 312 (345)
T 3hko_A 249 TNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADT-ISQVLNK------------KLCF---ENPNYNVLSPLARDLLS 312 (345)
T ss_dssp SSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHC------------CCCT---TSGGGGGSCHHHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHH-HHHHHhc------------cccc---CCcccccCCHHHHHHHH
Confidence 6789999999999999999999999975432211 1110000 0000 01111233456788999
Q ss_pred hcCCCCCCCCCCHHHHHHH
Q 039720 940 ACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 940 ~cl~~dP~~RPs~~evl~~ 958 (973)
+||+.||++||++.|+++.
T Consensus 313 ~~l~~~p~~Rps~~~~l~h 331 (345)
T 3hko_A 313 NLLNRNVDERFDAMRALQH 331 (345)
T ss_dssp HHSCSCTTTSCCHHHHHHS
T ss_pred HHcCCChhHCCCHHHHhcC
Confidence 9999999999999999874
No 166
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=5.3e-38 Score=343.80 Aligned_cols=268 Identities=24% Similarity=0.388 Sum_probs=207.1
Q ss_pred hhcCCcCCccccccceeEEEEEECCCC---cEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCC
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDG---MSVAVKVMNLDK-KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGA 748 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 748 (973)
..+|++.+.||+|+||+||+|++..++ ..||+|++.... ....+.+.+|+.++++++||||+++++++.. ..
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~ 99 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR----SE 99 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECC----SS
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEc----CC
Confidence 357899999999999999999975433 468999986433 3445778999999999999999999998643 34
Q ss_pred ceEEEEEeeccCCCHHHHhhhcC-CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccch
Q 039720 749 DFKAIVYEYMQYGSVDDWLHHTN-DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 827 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~ 827 (973)
...++||||+++|+|.+++.... ......++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 100 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~ 176 (298)
T 3f66_A 100 GSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 176 (298)
T ss_dssp SCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGC
T ss_pred CceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccc
Confidence 67889999999999999997643 456778899999999999999999 99999999999999999999999999998
Q ss_pred hccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCccHhhhhhHhcC
Q 039720 828 FLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHGYAKMALP 906 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~ 906 (973)
....... ..........+|+.|+|||.+.+..++.++||||+|+++|+|++ |.+||........ ........
T Consensus 177 ~~~~~~~----~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~-~~~~~~~~-- 249 (298)
T 3f66_A 177 DMYDKEY----YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI-TVYLLQGR-- 249 (298)
T ss_dssp CCSCGGG----CBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTH-HHHHHTTC--
T ss_pred cccccch----hccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHH-HHHHhcCC--
Confidence 6643221 01122234457889999999999999999999999999999999 5666654433221 11110000
Q ss_pred cccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccccccCCC
Q 039720 907 KKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEIFIGPP 970 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 970 (973)
....+..++..+.+++.+||+.||++||+++|+++.|+++...+.+..
T Consensus 250 ----------------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~~~ 297 (298)
T 3f66_A 250 ----------------RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEH 297 (298)
T ss_dssp ----------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCCSC
T ss_pred ----------------CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhccCC
Confidence 001112234567889999999999999999999999999988877653
No 167
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.3e-38 Score=351.06 Aligned_cols=258 Identities=22% Similarity=0.372 Sum_probs=200.2
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEE----EEEEeecc-cchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCC
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSV----AVKVMNLD-KKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKG 747 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~v----avK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 747 (973)
.++|++.+.||+|+||+||+|++..+++.| |+|.+... .....+.+.+|+.+++.++||||+++++++..
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----- 88 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT----- 88 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES-----
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec-----
Confidence 368999999999999999999998888765 66665432 33456789999999999999999999998764
Q ss_pred CceEEEEEeeccCCCHHHHhhhc-CCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccc
Q 039720 748 ADFKAIVYEYMQYGSVDDWLHHT-NDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 826 (973)
Q Consensus 748 ~~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a 826 (973)
...++|+||+.+|+|.+++... ....+..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 89 -~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a 164 (327)
T 3lzb_A 89 -STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA 164 (327)
T ss_dssp -SSEEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC-
T ss_pred -CCceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcce
Confidence 3478999999999999999764 4567788999999999999999999 9999999999999999999999999999
Q ss_pred hhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCccHhhhhhHhc
Q 039720 827 RFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHGYAKMAL 905 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~~~~~~~~~~~~~~ 905 (973)
+...... .........+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... +........
T Consensus 165 ~~~~~~~------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~~~~~~ 236 (327)
T 3lzb_A 165 KLLGAEE------KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSILEKGE 236 (327)
T ss_dssp ---------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHHTTC
T ss_pred eEccCcc------ccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HHHHHHcCC
Confidence 8764322 1222223456788999999999999999999999999999999 999997653321 111111000
Q ss_pred CcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccc
Q 039720 906 PKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGE 964 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 964 (973)
....+..++..+.+++.+||+.||++||+++|+++.|+++..
T Consensus 237 -----------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 237 -----------------RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp -----------------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred -----------------CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 011112234567789999999999999999999999998853
No 168
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.5e-37 Score=339.68 Aligned_cols=271 Identities=18% Similarity=0.232 Sum_probs=207.8
Q ss_pred HhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceE
Q 039720 672 ATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFK 751 (973)
Q Consensus 672 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 751 (973)
..++|++.+.||+|+||+||+|++..+++.||||++..... ...+.+|+.+++.++|++++..+.++.. .....
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~----~~~~~ 80 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGA----EGDYN 80 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEE----ETTEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecC----CCCce
Confidence 45789999999999999999999999999999999764432 2357889999999999888887777643 34788
Q ss_pred EEEEeeccCCCHHHHhhh-cCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe---cCCCcEEEeccccch
Q 039720 752 AIVYEYMQYGSVDDWLHH-TNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLL---DHDMVAHVSDFGLAR 827 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl---~~~~~~kl~Dfg~a~ 827 (973)
++||||+ +++|.+++.. ....++..++.++.|++.||.|||+. +|+||||||+||++ +.++.+||+|||+++
T Consensus 81 ~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~ 156 (296)
T 4hgt_A 81 VMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156 (296)
T ss_dssp EEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccce
Confidence 9999999 9999999974 44567888999999999999999999 99999999999999 788999999999998
Q ss_pred hccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCc--cHhhhhhHhc
Q 039720 828 FLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGL--TLHGYAKMAL 905 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~--~~~~~~~~~~ 905 (973)
.......... ..........||+.|+|||++.+..++.++|||||||++|+|++|+.||........ .+........
T Consensus 157 ~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 235 (296)
T 4hgt_A 157 KYRDARTHQH-IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM 235 (296)
T ss_dssp ECBCTTTCCB-CCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHH
T ss_pred eccCcccCcc-CCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccc
Confidence 7654321000 001223345799999999999999999999999999999999999999986543321 1111111110
Q ss_pred CcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhcccccc
Q 039720 906 PKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEIFI 967 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 967 (973)
.... ......++..+.+++.+||+.||++||+++|+++.|+++.....
T Consensus 236 ~~~~--------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~ 283 (296)
T 4hgt_A 236 STPI--------------EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp HSCH--------------HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred cchh--------------hhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence 0000 00011224577899999999999999999999999998865443
No 169
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=3.4e-38 Score=348.41 Aligned_cols=267 Identities=21% Similarity=0.358 Sum_probs=211.6
Q ss_pred HHHHHHhhcCCcCCccccccceeEEEEEE-----CCCCcEEEEEEeecccc-hhHHHHHHHHHHHHhc-CCCCceeEEeE
Q 039720 667 AELSKATKEFSSSNRIGKGSFGFVYKGNL-----GEDGMSVAVKVMNLDKK-GATKSFVAECEALRNI-RHRNLIKIITI 739 (973)
Q Consensus 667 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~ 739 (973)
.......++|++.+.||+|+||+||+|++ ..+++.||||+++.... ...+.+.+|+.+++++ +||||++++++
T Consensus 20 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 99 (316)
T 2xir_A 20 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 99 (316)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEE
Confidence 33444567999999999999999999985 35778999999975433 3446789999999999 79999999998
Q ss_pred eeecccCCCceEEEEEeeccCCCHHHHhhhcCC----------------CchhhHHHHHHHHHHHHHHHHhcCCCCeEec
Q 039720 740 CSSIDFKGADFKAIVYEYMQYGSVDDWLHHTND----------------KLEVGKLNIVIEVASVIEYLHNHCQPPIVHG 803 (973)
Q Consensus 740 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~----------------~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHr 803 (973)
+... ....++||||+++|+|.+++..... ..+..++.++.|++.||.|||+. +|+||
T Consensus 100 ~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~ 172 (316)
T 2xir_A 100 CTKP----GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 172 (316)
T ss_dssp ECCT----TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred EecC----CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Ccccc
Confidence 7542 3568999999999999999987554 56678899999999999999999 99999
Q ss_pred CCCCCcEEecCCCcEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-
Q 039720 804 DLKPSNVLLDHDMVAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT- 882 (973)
Q Consensus 804 Dik~~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt- 882 (973)
||||+||+++.++.+||+|||+++...... .........||+.|+|||++.+..++.++|||||||++|+|++
T Consensus 173 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~ 246 (316)
T 2xir_A 173 DLAARNILLSEKNVVKICDFGLARDIYKDP------DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 246 (316)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCT------TSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred cCccceEEECCCCCEEECCCccccccccCc------cceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhC
Confidence 999999999999999999999998654321 1122334567889999999999999999999999999999998
Q ss_pred CCCCCCCCCCCCccHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhc
Q 039720 883 RRRPTDNMFNDGLTLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAV 962 (973)
Q Consensus 883 g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 962 (973)
|+.||................. . ...+..+...+.+++.+||+.||++|||++|+++.|+++
T Consensus 247 g~~p~~~~~~~~~~~~~~~~~~-~-----------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 308 (316)
T 2xir_A 247 GASPYPGVKIDEEFCRRLKEGT-R-----------------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308 (316)
T ss_dssp SCCSSTTCCCSHHHHHHHHHTC-C-----------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCcccchhHHHHHHhccCc-c-----------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 9999976543321111111100 0 001112344677899999999999999999999999987
Q ss_pred cc
Q 039720 963 GE 964 (973)
Q Consensus 963 ~~ 964 (973)
..
T Consensus 309 ~~ 310 (316)
T 2xir_A 309 LQ 310 (316)
T ss_dssp HH
T ss_pred Hh
Confidence 53
No 170
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=6.2e-39 Score=354.44 Aligned_cols=279 Identities=24% Similarity=0.347 Sum_probs=211.7
Q ss_pred cC-CcCCccccccceeEEEEEE----CCCCcEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCC
Q 039720 675 EF-SSSNRIGKGSFGFVYKGNL----GEDGMSVAVKVMNLDK-KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGA 748 (973)
Q Consensus 675 ~y-~~~~~lg~G~~g~V~~~~~----~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 748 (973)
+| ++.+.||+|+||+||+|++ ..+++.||||+++... ....+.+.+|+++++.++||||+++++++... +.
T Consensus 31 r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~ 107 (318)
T 3lxp_A 31 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDA---GA 107 (318)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET---TT
T ss_pred HHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecC---CC
Confidence 45 9999999999999988764 3478999999997653 23456789999999999999999999997652 34
Q ss_pred ceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchh
Q 039720 749 DFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 828 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~ 828 (973)
...++||||+++|+|.+++.... ..+..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.++.
T Consensus 108 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 183 (318)
T 3lxp_A 108 ASLQLVMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKA 183 (318)
T ss_dssp TEEEEEECCCTTCBHHHHGGGSC-CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred ceEEEEEecccCCcHHHHHhhCC-CCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccc
Confidence 67899999999999999997654 67788999999999999999999 999999999999999999999999999987
Q ss_pred ccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhc-Cc
Q 039720 829 LSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMAL-PK 907 (973)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~-~~ 907 (973)
...... .........+|+.|+|||++.+..++.++||||||+++|+|++|+.||............+..... ..
T Consensus 184 ~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~ 258 (318)
T 3lxp_A 184 VPEGHE-----YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVL 258 (318)
T ss_dssp CCTTCS-----EEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHH
T ss_pred cccccc-----ccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHH
Confidence 643220 011223345788899999999989999999999999999999999998753221100000000000 00
Q ss_pred ccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccccccCCC
Q 039720 908 KVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEIFIGPP 970 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 970 (973)
.....+.. ......+..++..+.+++.+||+.||++|||++|+++.|+++.+.+.+++
T Consensus 259 ~~~~~~~~-----~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~~ 316 (318)
T 3lxp_A 259 RLTELLER-----GERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQA 316 (318)
T ss_dssp HHHHHHHT-----TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHhc-----ccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccCC
Confidence 00000000 01112223445678899999999999999999999999999988887664
No 171
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.7e-38 Score=345.45 Aligned_cols=245 Identities=21% Similarity=0.248 Sum_probs=192.4
Q ss_pred hcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhc-CCCCceeEEeEeeecccCCCce
Q 039720 674 KEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK--KGATKSFVAECEALRNI-RHRNLIKIITICSSIDFKGADF 750 (973)
Q Consensus 674 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 750 (973)
++|++.++||+|+||+||+|++..+|+.||||++.... .........|+..+..+ +||||++++++|.+ ...
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~-----~~~ 131 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEE-----GGI 131 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----TTE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEe-----CCE
Confidence 57999999999999999999999999999999986543 22334555666666555 89999999999765 478
Q ss_pred EEEEEeeccCCCHHHHhhhcC-CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhc
Q 039720 751 KAIVYEYMQYGSVDDWLHHTN-DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 829 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~ 829 (973)
.++||||+ +++|.+++...+ .+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++...
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~ 207 (311)
T 3p1a_A 132 LYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVEL 207 (311)
T ss_dssp EEEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEEC
T ss_pred EEEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeec
Confidence 99999999 678998887644 467888999999999999999999 9999999999999999999999999999865
Q ss_pred cCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCccc
Q 039720 830 SHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKV 909 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
... .......||+.|+|||++.+ .++.++|||||||++|||++|..|+.... . +.....
T Consensus 208 ~~~---------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~----~---~~~~~~---- 266 (311)
T 3p1a_A 208 GTA---------GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE----G---WQQLRQ---- 266 (311)
T ss_dssp C---------------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH----H---HHHHTT----
T ss_pred ccC---------CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc----H---HHHHhc----
Confidence 432 12234468999999999876 78999999999999999999977654321 1 111100
Q ss_pred ccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 910 MGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
.... +.........+.+++.+||+.||++|||++|+++.
T Consensus 267 -~~~~---------~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 267 -GYLP---------PEFTAGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp -TCCC---------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred -cCCC---------cccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 0000 11122345678899999999999999999999863
No 172
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=7.8e-38 Score=348.86 Aligned_cols=271 Identities=19% Similarity=0.249 Sum_probs=194.6
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcC-CCCceeEEeEeeecc---cCCC
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIR-HRNLIKIITICSSID---FKGA 748 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~---~~~~ 748 (973)
..+|++.+.||+|+||+||+|++..+++.||||++........+.+.+|+.+++++. ||||+++++++.... ....
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 358999999999999999999999999999999997766666778999999999996 999999999875321 2345
Q ss_pred ceEEEEEeeccCCCHHHHhhh---cCCCchhhHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCcEEecCCCcEEEecc
Q 039720 749 DFKAIVYEYMQYGSVDDWLHH---TNDKLEVGKLNIVIEVASVIEYLHNHCQPP--IVHGDLKPSNVLLDHDMVAHVSDF 823 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~--ivHrDik~~NILl~~~~~~kl~Df 823 (973)
...++||||+. |+|.+++.. .+.+.+..++.++.||+.||+|||+. + |+||||||+||+++.++.+||+||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEecC
Confidence 66899999996 789888864 44567788999999999999999998 8 999999999999999999999999
Q ss_pred ccchhccCCCCccCCC----CCcccccccccccccCcccc---cCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCcc
Q 039720 824 GLARFLSHHPFLVAPE----GQSSSIEMKGTIGYIGPEYG---MGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLT 896 (973)
Q Consensus 824 g~a~~~~~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~---~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~ 896 (973)
|+++............ .........||+.|+|||++ .+..++.++|||||||++|+|++|+.||.......
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-- 260 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR-- 260 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH--
Confidence 9998765432100000 00111234589999999998 56678999999999999999999999997532210
Q ss_pred HhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccccccCC
Q 039720 897 LHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEIFIGP 969 (973)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 969 (973)
. ....... .........+.+++.+||+.||++||+++|+++.|+++......+
T Consensus 261 ---~------------~~~~~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~~ 313 (337)
T 3ll6_A 261 ---I------------VNGKYSI-----PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVN 313 (337)
T ss_dssp --------------------CCC-----CTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTCC
T ss_pred ---h------------hcCcccC-----CcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCCC
Confidence 0 0000000 000111223668889999999999999999999999886544433
No 173
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=2.9e-38 Score=350.76 Aligned_cols=271 Identities=20% Similarity=0.298 Sum_probs=197.4
Q ss_pred HHhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccc--hhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCC
Q 039720 671 KATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKK--GATKSFVAECEALRNIRHRNLIKIITICSSIDFKGA 748 (973)
Q Consensus 671 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 748 (973)
...++|++.+.||+|+||+||+|++..+++.||||+++.... ...+.+.+|+.+++.++||||+++++++.. .
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~ 105 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHH-----N 105 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEE-----T
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEec-----C
Confidence 455789999999999999999999999999999999975432 234567899999999999999999999765 4
Q ss_pred ceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEec-----CCCcEEEecc
Q 039720 749 DFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLD-----HDMVAHVSDF 823 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~-----~~~~~kl~Df 823 (973)
...++||||+. |+|.+++.......+..++.++.||+.||+|||++ +|+||||||+||+++ .++.+||+||
T Consensus 106 ~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Df 181 (329)
T 3gbz_A 106 HRLHLIFEYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDF 181 (329)
T ss_dssp TEEEEEEECCS-EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCT
T ss_pred CEEEEEEecCC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcC
Confidence 78999999998 59999999888888899999999999999999999 999999999999994 4556999999
Q ss_pred ccchhccCCCCccCCCCCcccccccccccccCcccccCC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhh
Q 039720 824 GLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGG-DLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAK 902 (973)
Q Consensus 824 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~ 902 (973)
|+++..... ........||+.|+|||++.+. .++.++|||||||++|||++|+.||...............
T Consensus 182 g~a~~~~~~--------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~ 253 (329)
T 3gbz_A 182 GLARAFGIP--------IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEV 253 (329)
T ss_dssp THHHHHC-------------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred CCccccCCc--------ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHH
Confidence 999876432 1223345689999999998874 5899999999999999999999999764332111111111
Q ss_pred HhcCcc--c---ccccCcc-cccccCCC----chhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 903 MALPKK--V---MGIVDPS-LLMEARGP----SKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 903 ~~~~~~--~---~~~~~~~-~~~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
...+.. . ....+.. ........ .........+.+++.+||+.||++|||++|+++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 254 LGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp HCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 111100 0 0000000 00000000 0011134567899999999999999999999873
No 174
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=2.9e-38 Score=346.57 Aligned_cols=272 Identities=23% Similarity=0.351 Sum_probs=206.0
Q ss_pred hcCCcCCccccccceeEEEEE----ECCCCcEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCC
Q 039720 674 KEFSSSNRIGKGSFGFVYKGN----LGEDGMSVAVKVMNLDK-KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGA 748 (973)
Q Consensus 674 ~~y~~~~~lg~G~~g~V~~~~----~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 748 (973)
++|++.+.||+|+||+||+|+ +..+++.||+|+++... ....+.+.+|+++++.++||||+++++++... +.
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~ 97 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTED---GG 97 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC------
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecC---CC
Confidence 568999999999999999999 56689999999997443 33457789999999999999999999987642 23
Q ss_pred ceEEEEEeeccCCCHHHHhhhc-CCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccch
Q 039720 749 DFKAIVYEYMQYGSVDDWLHHT-NDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 827 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~ 827 (973)
...++||||+++|+|.+++... ....+..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 98 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 174 (302)
T 4e5w_A 98 NGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK 174 (302)
T ss_dssp CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred ceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccccc
Confidence 5689999999999999999544 4567788999999999999999999 99999999999999999999999999998
Q ss_pred hccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCc
Q 039720 828 FLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPK 907 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 907 (973)
....... .........||..|+|||++.+..++.++||||+|+++|+|++|+.|+...... ......+.
T Consensus 175 ~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~ 243 (302)
T 4e5w_A 175 AIETDKE-----YYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMAL------FLKMIGPT 243 (302)
T ss_dssp ECCTTCC-----EEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH------HHHHHCSC
T ss_pred cccCCCc-----ceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhH------HhhccCCc
Confidence 7654321 011223345788899999999999999999999999999999999986532110 00000000
Q ss_pred c---cccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhcc
Q 039720 908 K---VMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVG 963 (973)
Q Consensus 908 ~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 963 (973)
. ....+.... ........+..++..+.+++.+||+.||++|||++|+++.|+++.
T Consensus 244 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 244 HGQMTVTRLVNTL-KEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp CGGGHHHHHHHHH-HTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccccCHHHHHHHH-hccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 0 000000000 000011122334567889999999999999999999999999863
No 175
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.3e-37 Score=363.49 Aligned_cols=253 Identities=23% Similarity=0.308 Sum_probs=203.2
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCc
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK---KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGAD 749 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 749 (973)
.++|.+.+.||+|+||+||+|+++.+|+.||+|++.... ......+.+|+++++.++||||+++++++.. ..
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~-----~~ 258 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFET-----KT 258 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SS
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEee-----CC
Confidence 367999999999999999999999999999999997542 2334678899999999999999999998543 47
Q ss_pred eEEEEEeeccCCCHHHHhhhcC----CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEecccc
Q 039720 750 FKAIVYEYMQYGSVDDWLHHTN----DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 825 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~ 825 (973)
..++||||++||+|.+++.... .+.+..++.++.||+.||+|||++ +|+||||||+|||++.++++||+|||+
T Consensus 259 ~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGl 335 (543)
T 3c4z_A 259 DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGL 335 (543)
T ss_dssp EEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTT
T ss_pred EEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecce
Confidence 8999999999999999987643 567788899999999999999999 999999999999999999999999999
Q ss_pred chhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhc
Q 039720 826 ARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMAL 905 (973)
Q Consensus 826 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~ 905 (973)
++..... ........||+.|+|||++.+..|+.++|||||||++|||++|+.||......... ........
T Consensus 336 a~~~~~~--------~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~-~~~~~~i~ 406 (543)
T 3c4z_A 336 AVELKAG--------QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN-KELKQRVL 406 (543)
T ss_dssp CEECCTT--------CCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCH-HHHHHHHH
T ss_pred eeeccCC--------CcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhH-HHHHHHHh
Confidence 9865432 11223457999999999999999999999999999999999999999865332111 11111110
Q ss_pred CcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCH-----HHHHH
Q 039720 906 PKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQM-----TAVVK 957 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~ 957 (973)
... ...+...+..+.+++.+||+.||++||++ +|+++
T Consensus 407 ~~~---------------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 407 EQA---------------VTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp HCC---------------CCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred hcc---------------cCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 000 01112234566788899999999999965 66664
No 176
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.6e-37 Score=337.31 Aligned_cols=258 Identities=20% Similarity=0.292 Sum_probs=206.5
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccc------hhHHHHHHHHHHHHhcCCCCceeEEeEeeecccC
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKK------GATKSFVAECEALRNIRHRNLIKIITICSSIDFK 746 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 746 (973)
.++|++.+.||+|+||+||+|++..+++.||+|+++.... ...+.+.+|+++++.++||||+++++++..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---- 79 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN---- 79 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC----
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecC----
Confidence 3679999999999999999999999999999999975432 135779999999999999999999998654
Q ss_pred CCceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCC----cEEEec
Q 039720 747 GADFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDM----VAHVSD 822 (973)
Q Consensus 747 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~----~~kl~D 822 (973)
....++||||+++++|.+++......++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|
T Consensus 80 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~d 155 (283)
T 3bhy_A 80 -KTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLID 155 (283)
T ss_dssp -SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECC
T ss_pred -CCeEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEe
Confidence 478999999999999999998877888899999999999999999999 999999999999998877 899999
Q ss_pred cccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhh
Q 039720 823 FGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAK 902 (973)
Q Consensus 823 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~ 902 (973)
||.+...... .......||+.|+|||++.+..++.++||||||+++|+|++|+.||....... ....
T Consensus 156 fg~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~ 222 (283)
T 3bhy_A 156 FGIAHKIEAG---------NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE----TLTN 222 (283)
T ss_dssp CTTCEECC-----------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH----HHHH
T ss_pred cccceeccCC---------CcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH----HHHH
Confidence 9999865432 12234568999999999999999999999999999999999999997543211 1111
Q ss_pred HhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH--HHHhcc
Q 039720 903 MALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVK--KLCAVG 963 (973)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~~~ 963 (973)
.... ..... .......+..+.+++.+||+.||++||+++|+++ .+++++
T Consensus 223 ~~~~-------~~~~~-----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 273 (283)
T 3bhy_A 223 ISAV-------NYDFD-----EEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273 (283)
T ss_dssp HHTT-------CCCCC-----HHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred hHhc-------ccCCc-----chhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence 0000 00000 1111233456778999999999999999999997 345543
No 177
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=3.8e-38 Score=341.44 Aligned_cols=260 Identities=24% Similarity=0.404 Sum_probs=207.5
Q ss_pred HhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceE
Q 039720 672 ATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFK 751 (973)
Q Consensus 672 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 751 (973)
..++|++.+.||+|+||+||+|++. ++..||+|+++... ...+.+.+|+++++.++||||+++++++.. +..
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~~ 82 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ------EPI 82 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS------SSC
T ss_pred CHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC------CCc
Confidence 3468999999999999999999985 67899999997543 245778999999999999999999998642 458
Q ss_pred EEEEeeccCCCHHHHhhhcC--CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhc
Q 039720 752 AIVYEYMQYGSVDDWLHHTN--DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 829 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~ 829 (973)
++||||+++++|.+++.... ..++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+...
T Consensus 83 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 159 (279)
T 1qpc_A 83 YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLI 159 (279)
T ss_dssp EEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccc
Confidence 89999999999999997643 567788999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCccHhhhhhHhcCcc
Q 039720 830 SHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHGYAKMALPKK 908 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~ 908 (973)
.... ........+++.|+|||++.+..++.++||||||+++|||++ |+.||....... ........
T Consensus 160 ~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~~~~~~---- 226 (279)
T 1qpc_A 160 EDNE-------YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQNLERG---- 226 (279)
T ss_dssp SSSC-------EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHHHTT----
T ss_pred cCcc-------cccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH--HHHHHhcc----
Confidence 4322 112223446788999999988899999999999999999999 999997543211 11110000
Q ss_pred cccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccccccC
Q 039720 909 VMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEIFIG 968 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 968 (973)
.. ...+..++..+.+++.+||+.||++|||++++++.|+++.....+
T Consensus 227 ----~~---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 273 (279)
T 1qpc_A 227 ----YR---------MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEG 273 (279)
T ss_dssp ----CC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC--
T ss_pred ----cC---------CCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhccC
Confidence 00 011123345678899999999999999999999999988655443
No 178
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.2e-37 Score=338.43 Aligned_cols=251 Identities=23% Similarity=0.336 Sum_probs=196.9
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK-KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFK 751 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 751 (973)
.++|.+.++||+|+||+||+|++..++..||+|++.... ....+.+.+|+++++.++||||+++++++.. ....
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~~ 95 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFED-----YHNM 95 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----SSEE
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheec-----CCeE
Confidence 368999999999999999999999999999999997654 3345788999999999999999999998654 4789
Q ss_pred EEEEeeccCCCHHHHhhhc----CCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe---cCCCcEEEeccc
Q 039720 752 AIVYEYMQYGSVDDWLHHT----NDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLL---DHDMVAHVSDFG 824 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl---~~~~~~kl~Dfg 824 (973)
++||||+++|+|.+++... ...++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||
T Consensus 96 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg 172 (285)
T 3is5_A 96 YIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFG 172 (285)
T ss_dssp EEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCC
T ss_pred EEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeee
Confidence 9999999999999988543 5677788999999999999999999 99999999999999 456789999999
Q ss_pred cchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHh
Q 039720 825 LARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMA 904 (973)
Q Consensus 825 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~ 904 (973)
++...... .......||+.|+|||++. ..++.++||||||+++|||++|+.||....... ........
T Consensus 173 ~a~~~~~~---------~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~--~~~~~~~~ 240 (285)
T 3is5_A 173 LAELFKSD---------EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE--VQQKATYK 240 (285)
T ss_dssp CCCC-------------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHC
T ss_pred cceecCCc---------ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHH--HHhhhccC
Confidence 99765432 1223456899999999875 568999999999999999999999997543211 11111110
Q ss_pred cCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 905 LPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
. ...... .......+.+++.+||+.||++|||++|+++.
T Consensus 241 ~---------~~~~~~------~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 241 E---------PNYAVE------CRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp C---------CCCCC--------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred C---------cccccc------cCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 000000 01123456788999999999999999999863
No 179
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.1e-38 Score=339.70 Aligned_cols=256 Identities=25% Similarity=0.406 Sum_probs=206.4
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceEE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFKA 752 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 752 (973)
.++|++.+.||+|+||+||+|++. +++.||+|++..... ..+.+.+|+++++.++||||+++++++.. ....+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 79 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLE-----QAPIC 79 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECS-----SSSCE
T ss_pred hhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcc-----CCCeE
Confidence 368999999999999999999996 788999999975543 34678999999999999999999998654 46789
Q ss_pred EEEeeccCCCHHHHhhhc-CCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhccC
Q 039720 753 IVYEYMQYGSVDDWLHHT-NDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLSH 831 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~~ 831 (973)
+||||+++++|.+++... ....+..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++....
T Consensus 80 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 156 (267)
T 3t9t_A 80 LVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 156 (267)
T ss_dssp EEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred EEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccc
Confidence 999999999999999865 3467788899999999999999999 999999999999999999999999999986533
Q ss_pred CCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCccHhhhhhHhcCcccc
Q 039720 832 HPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHGYAKMALPKKVM 910 (973)
Q Consensus 832 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
.. ........+++.|+|||++.+..++.++||||+|+++|+|++ |+.||....... ........
T Consensus 157 ~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~i~~~------ 221 (267)
T 3t9t_A 157 DQ-------YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE--VVEDISTG------ 221 (267)
T ss_dssp HH-------HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHHHTT------
T ss_pred cc-------ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHH--HHHHHhcC------
Confidence 11 111223456788999999998899999999999999999999 899997542211 11100000
Q ss_pred cccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccc
Q 039720 911 GIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGE 964 (973)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 964 (973)
.. ...+...+..+.+++.+||+.||++||+++|+++.|+++.+
T Consensus 222 --~~---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 222 --FR---------LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp --CC---------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --Cc---------CCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 00 00111224567789999999999999999999999998854
No 180
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.3e-37 Score=338.27 Aligned_cols=256 Identities=20% Similarity=0.285 Sum_probs=208.4
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCc
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK---KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGAD 749 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 749 (973)
.++|++.+.||+|+||+||+|++..+++.||+|++.... ....+.+.+|+++++.++||||+++++++.. ..
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~ 87 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHD-----RK 87 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----SS
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEc-----CC
Confidence 368999999999999999999999999999999996432 2234678999999999999999999998654 47
Q ss_pred eEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhc
Q 039720 750 FKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 829 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~ 829 (973)
..++||||+++|+|.+++...+...+..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 88 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~ 164 (284)
T 2vgo_A 88 RIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHA 164 (284)
T ss_dssp EEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccC
Confidence 8999999999999999999887888889999999999999999999 9999999999999999999999999998754
Q ss_pred cCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCccc
Q 039720 830 SHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKV 909 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
... ......|++.|+|||++.+..++.++||||||+++|+|++|+.||....... ...... ..
T Consensus 165 ~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~~-~~-- 227 (284)
T 2vgo_A 165 PSL----------RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE----THRRIV-NV-- 227 (284)
T ss_dssp SSS----------CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH----HHHHHH-TT--
T ss_pred ccc----------ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH----HHHHHh-cc--
Confidence 321 1224568999999999999999999999999999999999999997542211 010100 00
Q ss_pred ccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH--HHHhccccc
Q 039720 910 MGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVK--KLCAVGEIF 966 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~~~~~~ 966 (973)
+.. .+......+.+++.+|++.||++||+++|+++ .++......
T Consensus 228 ----~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~~~~ 273 (284)
T 2vgo_A 228 ----DLK---------FPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRV 273 (284)
T ss_dssp ----CCC---------CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHCCCC
T ss_pred ----ccC---------CCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhcccc
Confidence 000 01122345678999999999999999999997 444444333
No 181
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=353.60 Aligned_cols=277 Identities=21% Similarity=0.352 Sum_probs=213.1
Q ss_pred hhcCCcCCccccccceeEEEEE----ECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCC
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGN----LGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGA 748 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 748 (973)
.++|++.+.||+|+||.||+|+ +..+++.||||++........+.+.+|+++++.++||||+++++++... +.
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~ 116 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA---GR 116 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC------
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEec---CC
Confidence 4679999999999999999999 4568999999999876666677899999999999999999999986532 23
Q ss_pred ceEEEEEeeccCCCHHHHhhhcC-CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccch
Q 039720 749 DFKAIVYEYMQYGSVDDWLHHTN-DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 827 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~ 827 (973)
...++||||+++++|.+++.... ...+..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 117 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~ 193 (326)
T 2w1i_A 117 RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTK 193 (326)
T ss_dssp -CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred CceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchh
Confidence 46899999999999999998754 467788899999999999999999 99999999999999999999999999998
Q ss_pred hccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcC-
Q 039720 828 FLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALP- 906 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~- 906 (973)
....... .........++..|+|||++.+..++.++||||||+++|||++|..||.....+. .........
T Consensus 194 ~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~---~~~~~~~~~~ 265 (326)
T 2w1i_A 194 VLPQDKE-----YYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEF---MRMIGNDKQG 265 (326)
T ss_dssp ECCSSCS-----EEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHH---HHHHCTTCCT
T ss_pred hcccccc-----ccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHH---HHhhccccch
Confidence 7643220 0011223356778999999998889999999999999999999999986431110 000000000
Q ss_pred ----cccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccccccC
Q 039720 907 ----KKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEIFIG 968 (973)
Q Consensus 907 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 968 (973)
..+.+.+.. ......+..++..+.+++.+||+.||++||+++|+++.|+++.+.+.|
T Consensus 266 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l~g 326 (326)
T 2w1i_A 266 QMIVFHLIELLKN-----NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMAG 326 (326)
T ss_dssp HHHHHHHHHHHHT-----TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHHHC
T ss_pred hhhHHHHHHHhhc-----CCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhcC
Confidence 000000000 001112233456788999999999999999999999999999887654
No 182
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=5.3e-38 Score=349.19 Aligned_cols=269 Identities=22% Similarity=0.314 Sum_probs=203.2
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccc--hhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCce
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKK--GATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADF 750 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 750 (973)
.++|++.+.||+|+||+||+|++..+|+.||||++..... ...+.+.+|+.+++.++||||+++++++.. ...
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~ 98 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKK-----KKR 98 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----TTE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeec-----CCE
Confidence 4689999999999999999999999999999999865432 234668899999999999999999999765 378
Q ss_pred EEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhcc
Q 039720 751 KAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLS 830 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~ 830 (973)
.++||||++++++.++........+..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++...
T Consensus 99 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 175 (331)
T 4aaa_A 99 WYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLA 175 (331)
T ss_dssp EEEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred EEEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeec
Confidence 999999999999999887777788889999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCccCCCCCcccccccccccccCcccccCC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhc----
Q 039720 831 HHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGG-DLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMAL---- 905 (973)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~---- 905 (973)
.. ........||+.|+|||++.+. .++.++||||+||++|+|++|+.||........ +........
T Consensus 176 ~~--------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~ 246 (331)
T 4aaa_A 176 AP--------GEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQ-LYHIMMCLGNLIP 246 (331)
T ss_dssp ----------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCSCCH
T ss_pred CC--------ccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCCCCh
Confidence 32 1222345689999999998875 789999999999999999999999976533211 111110000
Q ss_pred --------CcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 906 --------PKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 906 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
.........+..............++..+.+++.+||+.||++|||++|+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 247 RHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp HHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred hhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00000000011100000001112345678899999999999999999998864
No 183
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=9.9e-38 Score=337.94 Aligned_cols=250 Identities=23% Similarity=0.394 Sum_probs=183.4
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCc
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK---KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGAD 749 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 749 (973)
.++|++.+.||+|+||+||+|++..+|+.||||++.... ....+.+.+|+.+++.++||||+++++++.. ..
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~ 84 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFED-----SN 84 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEEC-----SS
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEcc-----CC
Confidence 468999999999999999999999899999999997442 2234678999999999999999999998654 47
Q ss_pred eEEEEEeeccCCCHHHHhhhc-CCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchh
Q 039720 750 FKAIVYEYMQYGSVDDWLHHT-NDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 828 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~ 828 (973)
..++||||+++++|.+++... ...++..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.+..
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~ 161 (278)
T 3cok_A 85 YVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQ 161 (278)
T ss_dssp EEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceee
Confidence 899999999999999999865 4567788999999999999999999 999999999999999999999999999986
Q ss_pred ccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCcc
Q 039720 829 LSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKK 908 (973)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 908 (973)
.... ........||+.|+|||++.+..++.++||||||+++|+|++|+.||.........
T Consensus 162 ~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~------------ 221 (278)
T 3cok_A 162 LKMP--------HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL------------ 221 (278)
T ss_dssp CC------------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------------
T ss_pred ccCC--------CCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH------------
Confidence 5422 11222456899999999999999999999999999999999999999754322110
Q ss_pred cccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 909 VMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
....... ...+ ......+.+++.+||+.||++||+++|+++.
T Consensus 222 -~~~~~~~----~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 222 -NKVVLAD----YEMP---SFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp ---CCSSC----CCCC---TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -HHHhhcc----cCCc---cccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 0000000 0001 1233467789999999999999999999863
No 184
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.2e-37 Score=354.12 Aligned_cols=278 Identities=22% Similarity=0.343 Sum_probs=195.6
Q ss_pred HhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecc--cchhHHHHHHHHHHHHhcC-CCCceeEEeEeeecccCCC
Q 039720 672 ATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLD--KKGATKSFVAECEALRNIR-HRNLIKIITICSSIDFKGA 748 (973)
Q Consensus 672 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~ 748 (973)
..++|++.+.||+|+||+||+|.+..+|+.||||++... .......+.+|+.+++.+. ||||+++++++.. .+.
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~---~~~ 83 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRA---DND 83 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC---TTS
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEec---CCC
Confidence 457899999999999999999999999999999998533 3345567889999999997 9999999998754 234
Q ss_pred ceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchh
Q 039720 749 DFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 828 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~ 828 (973)
...++||||+. |+|.+++... ...+..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+.
T Consensus 84 ~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 158 (388)
T 3oz6_A 84 RDVYLVFDYME-TDLHAVIRAN-ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRS 158 (388)
T ss_dssp SCEEEEEECCS-EEHHHHHHHT-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred CEEEEEecccC-cCHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccccc
Confidence 57899999998 5899988763 567788889999999999999999 999999999999999999999999999986
Q ss_pred ccCCCCccC-------------CCCCcccccccccccccCcccccC-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCC
Q 039720 829 LSHHPFLVA-------------PEGQSSSIEMKGTIGYIGPEYGMG-GDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDG 894 (973)
Q Consensus 829 ~~~~~~~~~-------------~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~ 894 (973)
......... ...........||+.|+|||++.+ ..|+.++||||+||++|||++|+.||.......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~ 238 (388)
T 3oz6_A 159 FVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMN 238 (388)
T ss_dssp SSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred ccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 543210000 011222344679999999999876 678999999999999999999999997643211
Q ss_pred ccHhhhhhH-hcCcc--cccccCcc-------ccc-----ccCCCchhH-------------HHHHHHHHHHhhcCCCCC
Q 039720 895 LTLHGYAKM-ALPKK--VMGIVDPS-------LLM-----EARGPSKFE-------------ECLVAVVRTGVACSMESP 946 (973)
Q Consensus 895 ~~~~~~~~~-~~~~~--~~~~~~~~-------~~~-----~~~~~~~~~-------------~~~~~l~~li~~cl~~dP 946 (973)
.+...... ..+.. +.....+. +.. ......... .+...+.+++.+||+.||
T Consensus 239 -~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP 317 (388)
T 3oz6_A 239 -QLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNP 317 (388)
T ss_dssp -HHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSG
T ss_pred -HHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCc
Confidence 11111110 00000 00000000 000 000000000 234567899999999999
Q ss_pred CCCCCHHHHHHH
Q 039720 947 SERMQMTAVVKK 958 (973)
Q Consensus 947 ~~RPs~~evl~~ 958 (973)
++|||++|++++
T Consensus 318 ~~R~t~~e~l~H 329 (388)
T 3oz6_A 318 NKRISANDALKH 329 (388)
T ss_dssp GGSCCHHHHTTS
T ss_pred ccCCCHHHHhCC
Confidence 999999999987
No 185
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.3e-37 Score=341.70 Aligned_cols=253 Identities=22% Similarity=0.292 Sum_probs=204.0
Q ss_pred HhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceE
Q 039720 672 ATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFK 751 (973)
Q Consensus 672 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 751 (973)
..++|.+.+.||+|+||+||+|++..+|+.||+|+++.........+.+|+.+++.++||||+++++++.. ....
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 81 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYES-----TTHY 81 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEEC-----SSEE
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhccc-----CCEE
Confidence 34689999999999999999999999999999999986655455678899999999999999999998654 4789
Q ss_pred EEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe---cCCCcEEEeccccchh
Q 039720 752 AIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLL---DHDMVAHVSDFGLARF 828 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl---~~~~~~kl~Dfg~a~~ 828 (973)
++||||+++++|.+++...+..++..+..++.|++.|+.|||+. +|+||||||+||++ +.++.+||+|||.++.
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~ 158 (304)
T 2jam_A 82 YLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM 158 (304)
T ss_dssp EEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCC
T ss_pred EEEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCccee
Confidence 99999999999999998887888889999999999999999999 99999999999999 7889999999999874
Q ss_pred ccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCcc
Q 039720 829 LSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKK 908 (973)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 908 (973)
... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||...... .+.........
T Consensus 159 ~~~----------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~-- 224 (304)
T 2jam_A 159 EQN----------GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES--KLFEKIKEGYY-- 224 (304)
T ss_dssp CCC----------BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHCCC--
T ss_pred cCC----------CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHcCCC--
Confidence 321 1223456899999999999999999999999999999999999999754321 11111000000
Q ss_pred cccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 909 VMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
. .. .......+..+.+++.+||+.||++||+++|+++.
T Consensus 225 --~-~~---------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 225 --E-FE---------SPFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp --C-CC---------TTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred --C-CC---------ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0 00 01112334567789999999999999999999874
No 186
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-37 Score=340.80 Aligned_cols=268 Identities=23% Similarity=0.357 Sum_probs=208.0
Q ss_pred cCCcCCccccccceeEEEEEECCCCc---EEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCce
Q 039720 675 EFSSSNRIGKGSFGFVYKGNLGEDGM---SVAVKVMNLDK-KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADF 750 (973)
Q Consensus 675 ~y~~~~~lg~G~~g~V~~~~~~~~~~---~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 750 (973)
.|.+.+.||+|+||+||+|++..++. .||+|++.... ....+.+.+|+.+++.++||||+++++++... ...
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~ 97 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPP----EGL 97 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCS----SSC
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecC----CCC
Confidence 56677999999999999999765544 79999987433 33457789999999999999999999987542 344
Q ss_pred EEEEEeeccCCCHHHHhhhc-CCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhc
Q 039720 751 KAIVYEYMQYGSVDDWLHHT-NDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 829 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~ 829 (973)
.++||||+.+|+|.+++... ....+..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 98 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 174 (298)
T 3pls_A 98 PHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDI 174 (298)
T ss_dssp CEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTT
T ss_pred cEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccc
Confidence 58999999999999999763 4456778899999999999999999 9999999999999999999999999999865
Q ss_pred cCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCccc
Q 039720 830 SHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKV 909 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
...... .........+|+.|+|||.+.+..++.++||||||+++|+|++|..|+....... .+........
T Consensus 175 ~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~-~~~~~~~~~~---- 245 (298)
T 3pls_A 175 LDREYY----SVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPF-DLTHFLAQGR---- 245 (298)
T ss_dssp TTGGGG----CSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGG-GHHHHHHTTC----
T ss_pred cCCccc----ccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHH-HHHHHhhcCC----
Confidence 432110 1122234567889999999999999999999999999999999665544322221 1111111100
Q ss_pred ccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccccccCCCC
Q 039720 910 MGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEIFIGPPI 971 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~ 971 (973)
....+..++..+.+++.+||+.||++|||++|+++.|+++.+.+.+...
T Consensus 246 -------------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~~~ 294 (298)
T 3pls_A 246 -------------RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGDHY 294 (298)
T ss_dssp -------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSCCB
T ss_pred -------------CCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhccch
Confidence 0111122345677899999999999999999999999999887776554
No 187
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=8.7e-38 Score=341.37 Aligned_cols=251 Identities=18% Similarity=0.257 Sum_probs=207.3
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCc
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK---KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGAD 749 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 749 (973)
.++|.+.+.||+|+||+||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++.. .+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~ 88 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED-----ND 88 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----SS
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeecc-----CC
Confidence 468999999999999999999999999999999997542 3345678899999999999999999998654 47
Q ss_pred eEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhc
Q 039720 750 FKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 829 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~ 829 (973)
..++||||+++++|.+++.......+.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.+...
T Consensus 89 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 165 (294)
T 2rku_A 89 FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 165 (294)
T ss_dssp EEEEEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceec
Confidence 8999999999999999998887888899999999999999999999 9999999999999999999999999999865
Q ss_pred cCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCccc
Q 039720 830 SHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKV 909 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
... ........||+.|+|||++.+..++.++||||+|+++|+|++|+.||......+ .+......
T Consensus 166 ~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~~~~~~~~--- 230 (294)
T 2rku_A 166 EYD--------GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE----TYLRIKKN--- 230 (294)
T ss_dssp CST--------TCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH----HHHHHHTT---
T ss_pred ccC--------ccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHhhc---
Confidence 422 112234568999999999999999999999999999999999999997543211 11111000
Q ss_pred ccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 039720 910 MGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKL 959 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 959 (973)
. ...+......+.+++.+||+.||++||+++|+++.-
T Consensus 231 ------~-------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~ 267 (294)
T 2rku_A 231 ------E-------YSIPKHINPVAASLIQKMLQTDPTARPTINELLNDE 267 (294)
T ss_dssp ------C-------CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred ------c-------CCCccccCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 0 000112234567889999999999999999999853
No 188
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-38 Score=355.65 Aligned_cols=266 Identities=24% Similarity=0.413 Sum_probs=199.0
Q ss_pred hcCCcCCccccccceeEEEEEECCC---CcEEEEEEeecc-cchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCc
Q 039720 674 KEFSSSNRIGKGSFGFVYKGNLGED---GMSVAVKVMNLD-KKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGAD 749 (973)
Q Consensus 674 ~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 749 (973)
..|.+.+.||+|+||+||+|++..+ +..||+|+++.. .....+.+.+|+.++++++||||++++++|.. ...
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~----~~~ 164 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR----SEG 164 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECC----CSS
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEc----CCC
Confidence 4577889999999999999987533 246899998643 33456789999999999999999999998643 346
Q ss_pred eEEEEEeeccCCCHHHHhhhcC-CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchh
Q 039720 750 FKAIVYEYMQYGSVDDWLHHTN-DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 828 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~ 828 (973)
..++||||+++|+|.+++.... ......++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 165 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 241 (373)
T 3c1x_A 165 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARD 241 (373)
T ss_dssp CCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred CeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccc
Confidence 7889999999999999997654 356677889999999999999999 999999999999999999999999999986
Q ss_pred ccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCccHhhhhhHhcCc
Q 039720 829 LSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHGYAKMALPK 907 (973)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~ 907 (973)
...... ..........+|+.|+|||++.+..++.++|||||||++|||++ |.+||......+. ....... .
T Consensus 242 ~~~~~~----~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~--~~~~~~~--~ 313 (373)
T 3c1x_A 242 MYDKEF----DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI--TVYLLQG--R 313 (373)
T ss_dssp --------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCH--HHHHHTT--C
T ss_pred cccccc----ccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHH--HHHHHcC--C
Confidence 543211 01112233457889999999999999999999999999999999 7778875533221 1111100 0
Q ss_pred ccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccccccCC
Q 039720 908 KVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEIFIGP 969 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 969 (973)
....+..++..+.+++.+||+.||++||+++|+++.|+++...+.+.
T Consensus 314 ---------------~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~ 360 (373)
T 3c1x_A 314 ---------------RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 360 (373)
T ss_dssp ---------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred ---------------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcccc
Confidence 01111233456789999999999999999999999999987666543
No 189
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=5.9e-38 Score=349.23 Aligned_cols=260 Identities=23% Similarity=0.398 Sum_probs=206.6
Q ss_pred hhcCCcCCccccccceeEEEEEEC-------CCCcEEEEEEeeccc-chhHHHHHHHHHHHHhc-CCCCceeEEeEeeec
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLG-------EDGMSVAVKVMNLDK-KGATKSFVAECEALRNI-RHRNLIKIITICSSI 743 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~-------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 743 (973)
.++|++.+.||+|+||+||+|++. .++..||||+++... ....+.+.+|+++++.+ +||||+++++++..
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~- 112 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ- 112 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc-
Confidence 468999999999999999999985 467889999997543 23456789999999999 89999999998654
Q ss_pred ccCCCceEEEEEeeccCCCHHHHhhhcCC----------------CchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 039720 744 DFKGADFKAIVYEYMQYGSVDDWLHHTND----------------KLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKP 807 (973)
Q Consensus 744 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~----------------~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~ 807 (973)
....++||||+++|+|.+++..... .....++.++.|++.||+|||+. +|+||||||
T Consensus 113 ----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp 185 (334)
T 2pvf_A 113 ----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAA 185 (334)
T ss_dssp ----SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSG
T ss_pred ----CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCcc
Confidence 4688999999999999999986542 56677899999999999999999 999999999
Q ss_pred CcEEecCCCcEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCC
Q 039720 808 SNVLLDHDMVAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRP 886 (973)
Q Consensus 808 ~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~P 886 (973)
+||+++.++.+||+|||+++....... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.|
T Consensus 186 ~NIll~~~~~~kL~Dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p 259 (334)
T 2pvf_A 186 RNVLVTENNVMKIADFGLARDINNIDY------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259 (334)
T ss_dssp GGEEECTTCCEEECCCTTCEECTTTSS------EECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCS
T ss_pred ceEEEcCCCCEEEcccccccccccccc------ccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999986643221 112223457788999999988899999999999999999999 9999
Q ss_pred CCCCCCCCccHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhcccc
Q 039720 887 TDNMFNDGLTLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEI 965 (973)
Q Consensus 887 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 965 (973)
|...... .+........ ....+..++..+.+++.+||+.||++||+++|+++.|+++...
T Consensus 260 ~~~~~~~--~~~~~~~~~~-----------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~ 319 (334)
T 2pvf_A 260 YPGIPVE--ELFKLLKEGH-----------------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319 (334)
T ss_dssp STTCCHH--HHHHHHHHTC-----------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCcCCHH--HHHHHHhcCC-----------------CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 9754221 1111111000 0111123345678899999999999999999999999988543
No 190
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1e-37 Score=345.57 Aligned_cols=253 Identities=22% Similarity=0.280 Sum_probs=200.4
Q ss_pred HhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccc--------hhHHHHHHHHHHHHhcCCCCceeEEeEeeec
Q 039720 672 ATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKK--------GATKSFVAECEALRNIRHRNLIKIITICSSI 743 (973)
Q Consensus 672 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 743 (973)
..++|++.+.||+|+||.||+|++..+++.||||++..... .....+.+|+++++.++||||+++++++..
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~- 86 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 86 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES-
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC-
Confidence 34689999999999999999999999999999999964321 123457899999999999999999998643
Q ss_pred ccCCCceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCc---EEE
Q 039720 744 DFKGADFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMV---AHV 820 (973)
Q Consensus 744 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~---~kl 820 (973)
...++||||+++++|.+++.......+..++.++.|++.||+|||++ +|+||||||+||+++.++. +||
T Consensus 87 -----~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl 158 (322)
T 2ycf_A 87 -----EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKI 158 (322)
T ss_dssp -----SSEEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEE
T ss_pred -----CceEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEE
Confidence 34899999999999999998887888888999999999999999999 9999999999999987664 999
Q ss_pred eccccchhccCCCCccCCCCCcccccccccccccCccccc---CCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccH
Q 039720 821 SDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGM---GGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTL 897 (973)
Q Consensus 821 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~ 897 (973)
+|||+++.... ........||+.|+|||++. ...++.++|||||||++|+|++|+.||..........
T Consensus 159 ~Dfg~~~~~~~---------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 229 (322)
T 2ycf_A 159 TDFGHSKILGE---------TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 229 (322)
T ss_dssp CCCTTCEECCC---------CHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHH
T ss_pred ccCccceeccc---------ccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHH
Confidence 99999986532 12223456899999999863 5678999999999999999999999997654332211
Q ss_pred hhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 039720 898 HGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVK 957 (973)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 957 (973)
......... . .+......+..+.+++.+||+.||++||+++|+++
T Consensus 230 ~~~~~~~~~------~---------~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 230 DQITSGKYN------F---------IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp HHHHHTCCC------C---------CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHhCccc------c---------CchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 111111000 0 01111233566789999999999999999999985
No 191
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=4.5e-38 Score=364.23 Aligned_cols=257 Identities=26% Similarity=0.412 Sum_probs=203.1
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceEE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFKA 752 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 752 (973)
.++|++.++||+|+||+||+|++. .+..||||+++.... ..+.+.+|++++++++||||+++++++.. ...+
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~------~~~~ 254 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPIY 254 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS------SSCE
T ss_pred hhHceeeeeecCCCCeEEEEEEEC-CCceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcC------CceE
Confidence 467899999999999999999996 457799999975432 45679999999999999999999998643 5688
Q ss_pred EEEeeccCCCHHHHhhhc--CCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhcc
Q 039720 753 IVYEYMQYGSVDDWLHHT--NDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLS 830 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~ 830 (973)
+||||+++|+|.+++... ......++..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 255 iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 331 (452)
T 1fmk_A 255 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 331 (452)
T ss_dssp EEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC---
T ss_pred EEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecC
Confidence 999999999999999753 3467788999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCccHhhhhhHhcCccc
Q 039720 831 HHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHGYAKMALPKKV 909 (973)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
... ........+++.|+|||++.+..++.++|||||||++|||++ |+.||......+ +......
T Consensus 332 ~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~~i~~------ 396 (452)
T 1fmk_A 332 DNE-------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VLDQVER------ 396 (452)
T ss_dssp ------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHHHT------
T ss_pred CCc-------eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHc------
Confidence 321 111223446788999999999999999999999999999999 999997643221 1111000
Q ss_pred ccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccccc
Q 039720 910 MGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEIF 966 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 966 (973)
.. ....+..++..+.++|.+||+.||++|||++++++.|+++....
T Consensus 397 ------~~-----~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 397 ------GY-----RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp ------TC-----CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred ------CC-----CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 00 01112344567889999999999999999999999999886543
No 192
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=3.7e-38 Score=343.69 Aligned_cols=258 Identities=24% Similarity=0.346 Sum_probs=205.5
Q ss_pred hhcCCcCC-ccccccceeEEEEEE--CCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCC
Q 039720 673 TKEFSSSN-RIGKGSFGFVYKGNL--GEDGMSVAVKVMNLDK--KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKG 747 (973)
Q Consensus 673 ~~~y~~~~-~lg~G~~g~V~~~~~--~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 747 (973)
.++|.+.+ .||+|+||+||+|.+ ..+++.||||+++... ....+.+.+|+++++.++||||+++++++.
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~------ 88 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE------ 88 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE------
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEC------
Confidence 46788888 999999999999954 5678899999997543 233577999999999999999999999873
Q ss_pred CceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccch
Q 039720 748 ADFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 827 (973)
Q Consensus 748 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~ 827 (973)
.+..++||||+++++|.+++.......+..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 89 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 165 (291)
T 1xbb_A 89 AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSK 165 (291)
T ss_dssp SSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred CCCcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcce
Confidence 257889999999999999999887788889999999999999999999 99999999999999999999999999998
Q ss_pred hccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCccHhhhhhHhcC
Q 039720 828 FLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHGYAKMALP 906 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~ 906 (973)
....... .........+++.|+|||++.+..++.++||||||+++|+|++ |+.||...... .+........
T Consensus 166 ~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~~~- 237 (291)
T 1xbb_A 166 ALRADEN-----YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTAMLEKGE- 237 (291)
T ss_dssp ECCTTCS-----EEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTTC-
T ss_pred eeccCCC-----cccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHcCC-
Confidence 6643221 0111222346788999999988889999999999999999999 99999764321 1111111000
Q ss_pred cccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhcc
Q 039720 907 KKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVG 963 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 963 (973)
....+..++..+.+++.+||+.||++||+++|+++.|+++-
T Consensus 238 ----------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 278 (291)
T 1xbb_A 238 ----------------RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 278 (291)
T ss_dssp ----------------CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred ----------------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 01111234456789999999999999999999999999874
No 193
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=6.2e-37 Score=344.89 Aligned_cols=272 Identities=23% Similarity=0.242 Sum_probs=205.4
Q ss_pred ccHHHHHHHhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcC-----CCCceeEEe
Q 039720 664 VSYAELSKATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIR-----HRNLIKIIT 738 (973)
Q Consensus 664 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~~~~ 738 (973)
+++.+.....++|++.++||+|+||+||+|++..+++.||||+++.. ......+..|+.+++.+. ||||+++++
T Consensus 25 ~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~ 103 (360)
T 3llt_A 25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHG 103 (360)
T ss_dssp CCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEE
T ss_pred eeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccc
Confidence 33344344567999999999999999999999999999999999743 234566788999999996 999999999
Q ss_pred EeeecccCCCceEEEEEeeccCCCHHHHhhhcC--CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecC--
Q 039720 739 ICSSIDFKGADFKAIVYEYMQYGSVDDWLHHTN--DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDH-- 814 (973)
Q Consensus 739 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~-- 814 (973)
++... +..++||||+ +++|.+++.... ......++.++.||+.||+|||+. +|+||||||+|||++.
T Consensus 104 ~~~~~-----~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~ 174 (360)
T 3llt_A 104 KFMYY-----DHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPY 174 (360)
T ss_dssp EEEET-----TEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTT
T ss_pred eeeEC-----CeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEcccc
Confidence 87653 7899999999 899999998654 467788999999999999999999 9999999999999975
Q ss_pred -----------------------CCcEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchH
Q 039720 815 -----------------------DMVAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVY 871 (973)
Q Consensus 815 -----------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvw 871 (973)
++.+||+|||+|+.... ......||+.|+|||++.+..++.++|||
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~Diw 243 (360)
T 3llt_A 175 FEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD-----------YHGSIINTRQYRAPEVILNLGWDVSSDMW 243 (360)
T ss_dssp CCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS-----------CCCSCCSCGGGCCHHHHTTCCCCTTHHHH
T ss_pred ccccccchhcccccccccccccCCCCEEEEeccCceecCC-----------CCcCccCcccccCcHHHcCCCCCCccchH
Confidence 78999999999986432 12245689999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHh--cCccc---------ccccC-cccccccC---------------CC
Q 039720 872 SFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMA--LPKKV---------MGIVD-PSLLMEAR---------------GP 924 (973)
Q Consensus 872 SlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~--~~~~~---------~~~~~-~~~~~~~~---------------~~ 924 (973)
||||++|+|++|+.||......+ .+....... .+... ....+ ........ .+
T Consensus 244 slG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 322 (360)
T 3llt_A 244 SFGCVLAELYTGSLLFRTHEHME-HLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLP 322 (360)
T ss_dssp HHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHCCCCCCCCcHHH-HHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhccc
Confidence 99999999999999997643211 111111110 00000 00000 00000000 00
Q ss_pred chhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 039720 925 SKFEECLVAVVRTGVACSMESPSERMQMTAVVK 957 (973)
Q Consensus 925 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 957 (973)
.........+.+++.+||+.||++|||++|+++
T Consensus 323 ~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 323 LYKIIKHELFCDFLYSILQIDPTLRPSPAELLK 355 (360)
T ss_dssp HHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred ccccchHHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 011111256779999999999999999999875
No 194
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=4.5e-38 Score=341.70 Aligned_cols=254 Identities=21% Similarity=0.352 Sum_probs=205.7
Q ss_pred HhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeeccc------
Q 039720 672 ATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDF------ 745 (973)
Q Consensus 672 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~------ 745 (973)
..++|++.+.||+|+||.||+|++..+++.||+|+++... +.+.+|+++++.++||||+++++++....+
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 3468999999999999999999999899999999997543 346689999999999999999998754221
Q ss_pred -----CCCceEEEEEeeccCCCHHHHhhhc--CCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcE
Q 039720 746 -----KGADFKAIVYEYMQYGSVDDWLHHT--NDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVA 818 (973)
Q Consensus 746 -----~~~~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~ 818 (973)
......++||||+++|+|.+++... ...++..++.++.|++.||.|||+. +|+||||||+||+++.++.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCE
Confidence 2245689999999999999999754 4567788899999999999999999 99999999999999999999
Q ss_pred EEeccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHh
Q 039720 819 HVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLH 898 (973)
Q Consensus 819 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~ 898 (973)
||+|||.+....... ......||+.|+|||++.+..++.++||||||+++|+|++|..|+....
T Consensus 162 kl~Dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~------- 225 (284)
T 2a19_B 162 KIGDFGLVTSLKNDG---------KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS------- 225 (284)
T ss_dssp EECCCTTCEESSCCS---------CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH-------
T ss_pred EECcchhheeccccc---------cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH-------
Confidence 999999998664321 2223468999999999999999999999999999999999998864210
Q ss_pred hhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhcccc
Q 039720 899 GYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEI 965 (973)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 965 (973)
....... +... + ...+..+.+++.+||+.||++||++.|+++.|+.+.+.
T Consensus 226 ~~~~~~~--------~~~~------~---~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~ 275 (284)
T 2a19_B 226 KFFTDLR--------DGII------S---DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS 275 (284)
T ss_dssp HHHHHHH--------TTCC------C---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred HHHHHhh--------cccc------c---ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence 0100000 0000 0 11234567889999999999999999999999988654
No 195
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=9.5e-38 Score=347.55 Aligned_cols=250 Identities=18% Similarity=0.263 Sum_probs=206.9
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCc
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK---KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGAD 749 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 749 (973)
.++|.+.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++.. ..
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~ 114 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED-----ND 114 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----SS
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-----CC
Confidence 468999999999999999999999999999999997542 3445778999999999999999999998654 47
Q ss_pred eEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhc
Q 039720 750 FKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 829 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~ 829 (973)
..++||||+++++|.+++.....+.+.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 115 ~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 191 (335)
T 2owb_A 115 FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 191 (335)
T ss_dssp EEEEEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred eEEEEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceec
Confidence 8999999999999999998887888899999999999999999999 9999999999999999999999999999865
Q ss_pred cCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCccc
Q 039720 830 SHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKV 909 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
... ........||+.|+|||++.+..++.++||||||+++|+|++|+.||......+ .+.......
T Consensus 192 ~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~~~~~-- 257 (335)
T 2owb_A 192 EYD--------GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE----TYLRIKKNE-- 257 (335)
T ss_dssp CST--------TCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH----HHHHHHHTC--
T ss_pred ccC--------cccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH----HHHHHhcCC--
Confidence 432 112234568999999999999999999999999999999999999997543211 111110000
Q ss_pred ccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 910 MGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
...+..+...+.+++.+||+.||++||+++|+++.
T Consensus 258 --------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 258 --------------YSIPKHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp --------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred --------------CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00011223456788999999999999999999874
No 196
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=5.9e-39 Score=352.20 Aligned_cols=272 Identities=22% Similarity=0.328 Sum_probs=191.1
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHh--cCCCCceeEEeEeeecccCCCce
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRN--IRHRNLIKIITICSSIDFKGADF 750 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~~~~~~~~ 750 (973)
.++|++.+.||+|+||+||+|++ +++.||||++... ....+.+|.+++.. ++||||+++++++... ......
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~-~~~~~~ 75 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKD-NGTWTQ 75 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-C--TTSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEE-CSSSEE
T ss_pred cceeeehhhccCCCCeEEEEEEE--cCcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccC-CCccce
Confidence 46899999999999999999988 5899999998643 34567778888877 7899999999997653 122237
Q ss_pred EEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHH--------hcCCCCeEecCCCCCcEEecCCCcEEEec
Q 039720 751 KAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLH--------NHCQPPIVHGDLKPSNVLLDHDMVAHVSD 822 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH--------~~~~~~ivHrDik~~NILl~~~~~~kl~D 822 (973)
.++||||+++|+|.+++... ......++.++.|++.|++||| +. +|+||||||+||+++.++.+||+|
T Consensus 76 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl~D 151 (303)
T 3gxj_A 76 LWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIAD 151 (303)
T ss_dssp EEEEEECCTTCCHHHHHHHC-CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCC
T ss_pred eEEEEeccCCCCHHHHHhcc-CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEEee
Confidence 89999999999999999654 5667788999999999999999 77 999999999999999999999999
Q ss_pred cccchhccCCCCccCCCCCcccccccccccccCcccccCC------CCCcccchHHHHHHHHHHHhC----------CCC
Q 039720 823 FGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGG------DLSMTGDVYSFGILLLEMFTR----------RRP 886 (973)
Q Consensus 823 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwSlG~ll~elltg----------~~P 886 (973)
||+++......... ........||+.|+|||++.+. .++.++|||||||++|||++| +.|
T Consensus 152 Fg~a~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p 227 (303)
T 3gxj_A 152 LGLAVRHDSATDTI----DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 227 (303)
T ss_dssp CCC-CCEETTTTEE----SCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCT
T ss_pred cCcceeccCCCccc----ccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecc
Confidence 99997664432100 1112234699999999998776 445789999999999999999 556
Q ss_pred CCCCCCCCccHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccccc
Q 039720 887 TDNMFNDGLTLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEIF 966 (973)
Q Consensus 887 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 966 (973)
|.................. ...............++...+.+++.+||+.||++|||++|+++.|+++....
T Consensus 228 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 228 YYDLVPSDPSVEEMRKVVC--------EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp TTTTCC-CCCCC-CHHHHT--------TSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred ccccCCCCccHHHHHHHHH--------HhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 5543322211111111111 11111111001112366778999999999999999999999999999986543
No 197
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=4.2e-38 Score=340.90 Aligned_cols=251 Identities=30% Similarity=0.410 Sum_probs=198.0
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceEE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFKA 752 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 752 (973)
.++|++.+.||+|+||+||+|++ +|+.||||+++.+. ..+.+.+|+++++.++||||+++++++.. .....+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~~~ 91 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE----EKGGLY 91 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECC----C--CCE
T ss_pred hhhceEEeEEecCCCceEEEEEE--cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEc----CCCceE
Confidence 46899999999999999999998 58999999997443 45778999999999999999999998643 235789
Q ss_pred EEEeeccCCCHHHHhhhcCC--CchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhcc
Q 039720 753 IVYEYMQYGSVDDWLHHTND--KLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLS 830 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~~~--~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~ 830 (973)
+||||+++++|.+++..... .++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 168 (278)
T 1byg_A 92 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 168 (278)
T ss_dssp EEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-----
T ss_pred EEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccc
Confidence 99999999999999976543 56677899999999999999999 99999999999999999999999999987543
Q ss_pred CCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCccHhhhhhHhcCccc
Q 039720 831 HHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHGYAKMALPKKV 909 (973)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
.. .....+++.|+|||++.+..++.++||||||+++|+|++ |+.||....... ...... ..
T Consensus 169 ~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~--~~~~~~----~~- 230 (278)
T 1byg_A 169 ST-----------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPRVE----KG- 230 (278)
T ss_dssp ------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG--HHHHHT----TT-
T ss_pred cc-----------ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHh----cC-
Confidence 21 112357889999999998999999999999999999998 999997643221 111100 00
Q ss_pred ccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccc
Q 039720 910 MGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGE 964 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 964 (973)
.. ...+..++..+.+++.+||+.||++||+++|+++.|+++..
T Consensus 231 ---~~---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 231 ---YK---------MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp ---CC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---CC---------CCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 00 11112334567889999999999999999999999998854
No 198
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=2.8e-37 Score=361.74 Aligned_cols=253 Identities=27% Similarity=0.327 Sum_probs=204.4
Q ss_pred HhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCc
Q 039720 672 ATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK--KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGAD 749 (973)
Q Consensus 672 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 749 (973)
..++|++.+.||+|+||+||+|++..+++.||||++.... ......+.+|++++++++||||+++++++.. ..
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~~ 94 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED-----SS 94 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SS
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEc-----CC
Confidence 3468999999999999999999999999999999996432 2345778999999999999999999998654 47
Q ss_pred eEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEec---CCCcEEEeccccc
Q 039720 750 FKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLD---HDMVAHVSDFGLA 826 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~---~~~~~kl~Dfg~a 826 (973)
..++||||+.+|+|.+.+.....+++..++.++.||+.||.|||++ +|+||||||+||+++ .++.+||+|||++
T Consensus 95 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a 171 (486)
T 3mwu_A 95 SFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (486)
T ss_dssp EEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCT
T ss_pred EEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcC
Confidence 8999999999999999998888888899999999999999999999 999999999999995 4568999999999
Q ss_pred hhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcC
Q 039720 827 RFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALP 906 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 906 (973)
+..... .......||+.|+|||++.+ .|+.++||||+||++|+|++|+.||......+ .+.........
T Consensus 172 ~~~~~~---------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~ 240 (486)
T 3mwu_A 172 TCFQQN---------TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD-ILKRVETGKYA 240 (486)
T ss_dssp TTBCCC-------------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCC
T ss_pred eECCCC---------CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCC
Confidence 865432 22234569999999999876 58999999999999999999999997543211 11111010000
Q ss_pred cccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 907 KKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
.+ .......+..+.+++.+||+.||++|||+.|+++.
T Consensus 241 ------~~---------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 241 ------FD---------LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp ------SC---------SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred ------CC---------CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00 11122344567789999999999999999999985
No 199
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=3.8e-38 Score=341.38 Aligned_cols=257 Identities=22% Similarity=0.276 Sum_probs=205.5
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCce
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK--KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADF 750 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 750 (973)
.++|++.+.||+|+||+||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++... ....
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~~ 81 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR---TNTT 81 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEG---GGTE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecC---CCce
Confidence 468999999999999999999999999999999997543 33456789999999999999999999987532 3468
Q ss_pred EEEEEeeccCCCHHHHhhhcC----CCchhhHHHHHHHHHHHHHHHHhcCCCC-----eEecCCCCCcEEecCCCcEEEe
Q 039720 751 KAIVYEYMQYGSVDDWLHHTN----DKLEVGKLNIVIEVASVIEYLHNHCQPP-----IVHGDLKPSNVLLDHDMVAHVS 821 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~~~~-----ivHrDik~~NILl~~~~~~kl~ 821 (973)
.++||||+++++|.+++.... ..++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~ 158 (279)
T 2w5a_A 82 LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLG 158 (279)
T ss_dssp EEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEEC
T ss_pred EEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEe
Confidence 899999999999999987532 367788999999999999999999 7 9999999999999999999999
Q ss_pred ccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhh
Q 039720 822 DFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYA 901 (973)
Q Consensus 822 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~ 901 (973)
|||.++..... ........||+.|+|||++.+..++.++||||||+++|+|++|+.||...... .+....
T Consensus 159 dfg~~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~i 228 (279)
T 2w5a_A 159 DFGLARILNHD--------TSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK--ELAGKI 228 (279)
T ss_dssp CCCHHHHC-----------CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHH
T ss_pred cCchheeeccc--------cccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH--HHHHHH
Confidence 99999875432 12223456899999999999999999999999999999999999999764321 111111
Q ss_pred hHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhc
Q 039720 902 KMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAV 962 (973)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 962 (973)
.... . ...+..++..+.+++.+||+.||++||+++|+++.+...
T Consensus 229 ~~~~--------~---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~ 272 (279)
T 2w5a_A 229 REGK--------F---------RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLIL 272 (279)
T ss_dssp HHTC--------C---------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCC
T ss_pred hhcc--------c---------ccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhh
Confidence 1000 0 011122345677899999999999999999999876544
No 200
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=8.6e-37 Score=341.24 Aligned_cols=277 Identities=22% Similarity=0.333 Sum_probs=213.1
Q ss_pred HHHHHHhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHh--cCCCCceeEEeEeeecc
Q 039720 667 AELSKATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRN--IRHRNLIKIITICSSID 744 (973)
Q Consensus 667 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~~ 744 (973)
..-....++|++.+.||+|+||+||+|++ +++.||||++... ....+.+|.+++.. ++||||+++++++...
T Consensus 35 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~- 108 (342)
T 1b6c_B 35 LVQRTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKD- 108 (342)
T ss_dssp HHHHHHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECC-
T ss_pred eecccccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeeccc-
Confidence 33345667999999999999999999998 6999999999633 34567889999887 7899999999987653
Q ss_pred cCCCceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHH--------hcCCCCeEecCCCCCcEEecCCC
Q 039720 745 FKGADFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLH--------NHCQPPIVHGDLKPSNVLLDHDM 816 (973)
Q Consensus 745 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH--------~~~~~~ivHrDik~~NILl~~~~ 816 (973)
.......++||||+++|+|.+++... ...+.+++.++.|++.||+||| +. +|+||||||+||+++.++
T Consensus 109 ~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~ 184 (342)
T 1b6c_B 109 NGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNG 184 (342)
T ss_dssp CSSCCCEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTS
T ss_pred CCccceeEEEEeecCCCcHHHHHhcc-CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCC
Confidence 11123789999999999999999764 5677889999999999999999 77 999999999999999999
Q ss_pred cEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCC------CCCcccchHHHHHHHHHHHhC-------
Q 039720 817 VAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGG------DLSMTGDVYSFGILLLEMFTR------- 883 (973)
Q Consensus 817 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwSlG~ll~elltg------- 883 (973)
.+||+|||+++......... ........||+.|+|||++.+. .++.++|||||||++|||++|
T Consensus 185 ~~kL~Dfg~~~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~ 260 (342)
T 1b6c_B 185 TCCIADLGLAVRHDSATDTI----DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH 260 (342)
T ss_dssp CEEECCCTTCEEEETTTTEE----EECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBC
T ss_pred CEEEEECCCceecccccccc----ccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcc
Confidence 99999999998664422000 0022345699999999998775 234789999999999999999
Q ss_pred ---CCCCCCCCCCCccHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 039720 884 ---RRPTDNMFNDGLTLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLC 960 (973)
Q Consensus 884 ---~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 960 (973)
+.||............+........ ..+.+.. .....++...+.+++.+||+.||++|||++||++.|+
T Consensus 261 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 332 (342)
T 1b6c_B 261 EDYQLPYYDLVPSDPSVEEMRKVVCEQK----LRPNIPN----RWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 332 (342)
T ss_dssp CCCCCTTTTTSCSSCCHHHHHHHHTTSC----CCCCCCG----GGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHH
T ss_pred cccccCccccCcCcccHHHHHHHHHHHH----hCCCCcc----cccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 7788765444333333332221111 1111111 0122466778999999999999999999999999999
Q ss_pred hcccc
Q 039720 961 AVGEI 965 (973)
Q Consensus 961 ~~~~~ 965 (973)
++.+.
T Consensus 333 ~i~~~ 337 (342)
T 1b6c_B 333 QLSQQ 337 (342)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 98654
No 201
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.3e-37 Score=358.40 Aligned_cols=212 Identities=23% Similarity=0.286 Sum_probs=174.3
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecc--cchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCce
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLD--KKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADF 750 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 750 (973)
.++|++.+.||+|+||+||+|++..+++.||||+++.. .....+++.+|+++++.++||||+++++++....+.....
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 36899999999999999999999999999999999743 2334578899999999999999999999986654444578
Q ss_pred EEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhcc
Q 039720 751 KAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLS 830 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~ 830 (973)
.++||||+. |+|.+++.....+.+..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|+...
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~~~ 180 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC-
T ss_pred EEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCccccc
Confidence 999999987 59999998887788899999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCccC--------------CCCCcccccccccccccCcccc-cCCCCCcccchHHHHHHHHHHHhCCCCCC
Q 039720 831 HHPFLVA--------------PEGQSSSIEMKGTIGYIGPEYG-MGGDLSMTGDVYSFGILLLEMFTRRRPTD 888 (973)
Q Consensus 831 ~~~~~~~--------------~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwSlG~ll~elltg~~Pf~ 888 (973)
....... ...........||+.|+|||++ ....|+.++||||+||++|||++|..||.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 181 SEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp ------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 3221000 0000123566899999999985 56679999999999999999998666654
No 202
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.1e-38 Score=351.21 Aligned_cols=272 Identities=14% Similarity=0.162 Sum_probs=207.7
Q ss_pred hhcCCcCCccccccceeEEEEEECC--------CCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCcee---------
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGE--------DGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIK--------- 735 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~--------- 735 (973)
.++|++.+.||+|+||+||+|++.. .++.||||++... +.+.+|++++++++|||+++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 3689999999999999999999987 3889999999744 35788999999999999987
Q ss_pred ------EEeEeeecccCCCceEEEEEeeccCCCHHHHhhhc--CCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 039720 736 ------IITICSSIDFKGADFKAIVYEYMQYGSVDDWLHHT--NDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKP 807 (973)
Q Consensus 736 ------~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~ 807 (973)
+++++.. .....++||||+ +++|.+++... ..+++..++.++.||+.||+|||++ +|+||||||
T Consensus 116 ~~~i~~~~~~~~~----~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp 187 (352)
T 2jii_A 116 LLAIPTCMGFGVH----QDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTA 187 (352)
T ss_dssp TCSCCCCCEEEEE----TTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCG
T ss_pred ccCccchhhcccc----CCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCH
Confidence 4555432 347899999999 99999999875 6678889999999999999999999 999999999
Q ss_pred CcEEecCCC--cEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCC
Q 039720 808 SNVLLDHDM--VAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRR 885 (973)
Q Consensus 808 ~NILl~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~ 885 (973)
+||+++.++ .+||+|||+++......... ...........||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 188 ~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~ 266 (352)
T 2jii_A 188 ENIFVDPEDQSQVTLAGYGFAFRYCPSGKHV-AYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFL 266 (352)
T ss_dssp GGEEEETTEEEEEEECCGGGCBCSSGGGCCC-CCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHEEEcCCCCceEEEecCcceeeccCCCccc-cccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCC
Confidence 999999998 99999999998664321100 011112234579999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhcccc
Q 039720 886 PTDNMFNDGLTLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEI 965 (973)
Q Consensus 886 Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 965 (973)
||.........+........ .......+.. ......+..+.+++.+||+.||++||+++|+++.|+++.+.
T Consensus 267 pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 337 (352)
T 2jii_A 267 PWTNCLPNTEDIMKQKQKFV-DKPGPFVGPC--------GHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQD 337 (352)
T ss_dssp TTGGGTTCHHHHHHHHHHHH-HSCCCEECTT--------SCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred CcccCCcCHHHHHHHHHhcc-CChhhhhhhc--------cccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHh
Confidence 99865433222222211110 0000000000 00112235677899999999999999999999999988655
Q ss_pred cc
Q 039720 966 FI 967 (973)
Q Consensus 966 ~~ 967 (973)
..
T Consensus 338 ~~ 339 (352)
T 2jii_A 338 LR 339 (352)
T ss_dssp TT
T ss_pred cC
Confidence 43
No 203
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=3.5e-37 Score=346.73 Aligned_cols=258 Identities=22% Similarity=0.341 Sum_probs=206.1
Q ss_pred HHHHHhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccc--------hhHHHHHHHHHHHHhc-CCCCceeEEe
Q 039720 668 ELSKATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKK--------GATKSFVAECEALRNI-RHRNLIKIIT 738 (973)
Q Consensus 668 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l-~h~niv~~~~ 738 (973)
......++|.+.+.||+|+||.||+|++..+|+.||||+++.... ...+.+.+|+.+++.+ +||||+++++
T Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 167 (365)
T 2y7j_A 88 AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID 167 (365)
T ss_dssp HHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred hhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence 334556789999999999999999999988999999999975431 1245678999999999 7999999999
Q ss_pred EeeecccCCCceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcE
Q 039720 739 ICSSIDFKGADFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVA 818 (973)
Q Consensus 739 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~ 818 (973)
++.. ....++||||+++++|.+++.......+..+..++.||+.||.|||+. ||+||||||+||+++.++.+
T Consensus 168 ~~~~-----~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~i 239 (365)
T 2y7j_A 168 SYES-----SSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQI 239 (365)
T ss_dssp EEEB-----SSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCE
T ss_pred EEee-----CCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCE
Confidence 8654 478999999999999999998877788888999999999999999999 99999999999999999999
Q ss_pred EEeccccchhccCCCCccCCCCCcccccccccccccCccccc------CCCCCcccchHHHHHHHHHHHhCCCCCCCCCC
Q 039720 819 HVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGM------GGDLSMTGDVYSFGILLLEMFTRRRPTDNMFN 892 (973)
Q Consensus 819 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~ 892 (973)
||+|||++...... .......||+.|+|||++. ...++.++|||||||++|+|++|+.||.....
T Consensus 240 kl~DfG~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~ 310 (365)
T 2y7j_A 240 RLSDFGFSCHLEPG---------EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ 310 (365)
T ss_dssp EECCCTTCEECCTT---------CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred EEEecCcccccCCC---------cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH
Confidence 99999999866432 1223457999999999875 33688999999999999999999999975321
Q ss_pred CCccHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 893 DGLTLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
. ......... ..... .......+..+.+++.+||+.||++||+++|+++.
T Consensus 311 ~--~~~~~i~~~-------~~~~~-------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 311 I--LMLRMIMEG-------QYQFS-------SPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp H--HHHHHHHHT-------CCCCC-------HHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred H--HHHHHHHhC-------CCCCC-------CcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1 111110000 00000 00111234567889999999999999999999873
No 204
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=4.9e-38 Score=353.88 Aligned_cols=266 Identities=23% Similarity=0.314 Sum_probs=206.1
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK-KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFK 751 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 751 (973)
.++|++.+.||+|+||+||+|++..++..||+|+++... ....+.+.+|+.+++.++||||+++++++.. ....
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~ 106 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-----DGEI 106 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEE-----TTEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEE-----CCEE
Confidence 368999999999999999999999999999999998653 3345778999999999999999999998765 3789
Q ss_pred EEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhccC
Q 039720 752 AIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLSH 831 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~~ 831 (973)
++||||+++++|.+++...+..++..+..++.|++.|++|||+.+ +|+||||||+||+++.++.+||+|||++.....
T Consensus 107 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 184 (360)
T 3eqc_A 107 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 184 (360)
T ss_dssp EEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred EEEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCccccc
Confidence 999999999999999998888888889999999999999999832 899999999999999999999999999976532
Q ss_pred CCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcC-----
Q 039720 832 HPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALP----- 906 (973)
Q Consensus 832 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~----- 906 (973)
.......||+.|+|||++.+..++.++|||||||++|+|++|+.||......... ........
T Consensus 185 ----------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~~~~~~~~~~~~ 252 (360)
T 3eqc_A 185 ----------SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELE--LMFGCQVEGDAAE 252 (360)
T ss_dssp ----------HC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHH--HHHC---------
T ss_pred ----------ccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH--HHhcccccccCCC
Confidence 1122456899999999999999999999999999999999999999754322110 00000000
Q ss_pred ----------------------cccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 907 ----------------------KKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 907 ----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
.......+. .............+...+.+++.+||+.||++|||++|++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 253 TPPRPRTPGRPLNKFGMDSRPPMAIFELLDY-IVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp ---------------------CCCHHHHHHH-HHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CCCCcccCCCcccccccCCCCcccchhhhhH-HhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 000000000 000000001111234567899999999999999999999874
No 205
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=347.56 Aligned_cols=253 Identities=22% Similarity=0.350 Sum_probs=195.8
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhcCC--CCceeEEeEeeecccCCC
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK--KGATKSFVAECEALRNIRH--RNLIKIITICSSIDFKGA 748 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~~ 748 (973)
.++|++.+.||+|+||+||+|.+. +++.||||++.... ....+.+.+|+.+++.++| |||+++++++.. .
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~-----~ 81 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT-----D 81 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----S
T ss_pred cCEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEee-----C
Confidence 467999999999999999999984 79999999997543 3344678999999999976 999999998654 4
Q ss_pred ceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchh
Q 039720 749 DFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 828 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~ 828 (973)
...++||| +.+++|.+++.......+.++..++.|++.||+|||+. +|+||||||+|||++ ++.+||+|||+++.
T Consensus 82 ~~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~ 156 (343)
T 3dbq_A 82 QYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQ 156 (343)
T ss_dssp SEEEEEEC-CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCC
T ss_pred CEEEEEEe-CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccc
Confidence 78999999 56789999999888888889999999999999999999 999999999999997 68899999999986
Q ss_pred ccCCCCccCCCCCcccccccccccccCcccccC-----------CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccH
Q 039720 829 LSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMG-----------GDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTL 897 (973)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~ 897 (973)
..... .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.........+
T Consensus 157 ~~~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~ 230 (343)
T 3dbq_A 157 MQPDT------TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 230 (343)
T ss_dssp C------------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHH
T ss_pred cCccc------ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHH
Confidence 54321 1112234579999999999764 678999999999999999999999997543321111
Q ss_pred hhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 039720 898 HGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKL 959 (973)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 959 (973)
.. . +++...... + ......+.+++.+||+.||++|||++|+++.-
T Consensus 231 ~~---~---------~~~~~~~~~--~---~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 231 HA---I---------IDPNHEIEF--P---DIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp HH---H---------HCTTSCCCC--C---CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred HH---H---------hcCCcccCC--c---ccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 11 1 111110001 1 11124567889999999999999999998764
No 206
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1e-37 Score=348.22 Aligned_cols=249 Identities=27% Similarity=0.354 Sum_probs=199.5
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCc
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK---KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGAD 749 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 749 (973)
.+.|.+.+.||+|+||+||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++.. ..
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~~ 127 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-----EH 127 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----TT
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-----CC
Confidence 356999999999999999999999999999999997543 2234678999999999999999999998765 37
Q ss_pred eEEEEEeeccCCCHHHHhhh-cCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchh
Q 039720 750 FKAIVYEYMQYGSVDDWLHH-TNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 828 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~ 828 (973)
..++||||+. |++.+++.. .....+..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 128 ~~~lv~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 203 (348)
T 1u5q_A 128 TAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASI 203 (348)
T ss_dssp EEEEEEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBS
T ss_pred eEEEEEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCcee
Confidence 8999999997 678877754 45567788999999999999999999 999999999999999999999999999975
Q ss_pred ccCCCCccCCCCCcccccccccccccCccccc---CCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhc
Q 039720 829 LSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGM---GGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMAL 905 (973)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~ 905 (973)
... .....||+.|+|||++. ...++.++|||||||++|||++|+.||...... ........
T Consensus 204 ~~~------------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~----~~~~~~~~ 267 (348)
T 1u5q_A 204 MAP------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM----SALYHIAQ 267 (348)
T ss_dssp SSS------------BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHHHHHH
T ss_pred cCC------------CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHHh
Confidence 432 12346899999999874 567899999999999999999999999754221 11111110
Q ss_pred CcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 039720 906 PKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLC 960 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 960 (973)
.. .+.. ....++..+.+++.+||+.||++|||++|+++...
T Consensus 268 ~~------~~~~--------~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~ 308 (348)
T 1u5q_A 268 NE------SPAL--------QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 308 (348)
T ss_dssp SC------CCCC--------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHH
T ss_pred cC------CCCC--------CCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChh
Confidence 00 0000 01122345778899999999999999999987644
No 207
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-37 Score=339.16 Aligned_cols=263 Identities=21% Similarity=0.322 Sum_probs=208.1
Q ss_pred hcCCcCC-ccccccceeEEEEEEC--CCCcEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCc
Q 039720 674 KEFSSSN-RIGKGSFGFVYKGNLG--EDGMSVAVKVMNLDK-KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGAD 749 (973)
Q Consensus 674 ~~y~~~~-~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 749 (973)
++|.+.+ .||+|+||+||+|.+. .++..||||+++... ....+.+.+|+++++.++||||+++++++.. +
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~ 82 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------E 82 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES------S
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecC------C
Confidence 4666666 8999999999999864 467889999997643 3456779999999999999999999998732 5
Q ss_pred eEEEEEeeccCCCHHHHhhhc-CCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchh
Q 039720 750 FKAIVYEYMQYGSVDDWLHHT-NDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 828 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~ 828 (973)
..++||||+++++|.+++... ...++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~ 159 (287)
T 1u59_A 83 ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKA 159 (287)
T ss_dssp SEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred CcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceee
Confidence 689999999999999998754 3467788999999999999999999 999999999999999999999999999987
Q ss_pred ccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCccHhhhhhHhcCc
Q 039720 829 LSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHGYAKMALPK 907 (973)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~ 907 (973)
...... .........+|+.|+|||++.+..++.++||||||+++|||++ |+.||....... +.......
T Consensus 160 ~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~i~~~--- 229 (287)
T 1u59_A 160 LGADDS-----YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--VMAFIEQG--- 229 (287)
T ss_dssp CTTCSC-----EECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH--HHHHHHTT---
T ss_pred eccCcc-----eeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH--HHHHHhcC---
Confidence 643221 0111223346889999999988899999999999999999999 999997653321 11111100
Q ss_pred ccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccccccCC
Q 039720 908 KVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEIFIGP 969 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 969 (973)
. ....+..++..+.+++.+||+.||++||+++|+++.|+++-....++
T Consensus 230 -----~---------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~ 277 (287)
T 1u59_A 230 -----K---------RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK 277 (287)
T ss_dssp -----C---------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTT
T ss_pred -----C---------cCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCc
Confidence 0 01112234567789999999999999999999999999886544443
No 208
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=4.3e-37 Score=341.87 Aligned_cols=265 Identities=18% Similarity=0.236 Sum_probs=204.3
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcC-CCCceeEEeEeeecccCCCceE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIR-HRNLIKIITICSSIDFKGADFK 751 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 751 (973)
.++|++.+.||+|+||+||+|++..+++.||||+++.. ..+.+.+|+.+++.++ ||||+++++++... .....
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~---~~~~~ 108 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDP---VSRTP 108 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECT---TTCCE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccC---CCCce
Confidence 36899999999999999999999999999999999643 3467889999999997 99999999987642 24678
Q ss_pred EEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCC-cEEEeccccchhcc
Q 039720 752 AIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDM-VAHVSDFGLARFLS 830 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~-~~kl~Dfg~a~~~~ 830 (973)
++||||+.+++|.+++.. ..+..+..++.|++.||+|||++ +|+||||||+||+++.++ .+||+|||+++...
T Consensus 109 ~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~ 182 (330)
T 3nsz_A 109 ALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 182 (330)
T ss_dssp EEEEECCCCCCHHHHGGG---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred EEEEeccCchhHHHHHHh---CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcC
Confidence 999999999999998854 56778899999999999999999 999999999999999777 89999999998654
Q ss_pred CCCCccCCCCCcccccccccccccCcccccC-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCccc
Q 039720 831 HHPFLVAPEGQSSSIEMKGTIGYIGPEYGMG-GDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKV 909 (973)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
.. .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.........+............
T Consensus 183 ~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~ 253 (330)
T 3nsz_A 183 PG---------QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDL 253 (330)
T ss_dssp TT---------CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHH
T ss_pred CC---------CccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchh
Confidence 32 12234468999999999877 678999999999999999999999996543332222221111110000
Q ss_pred cc---------------c---cCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 910 MG---------------I---VDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 910 ~~---------------~---~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
.+ . .....+...............+.+++.+||+.||++|||++|++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 254 YDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp HHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred hhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 00 0 0001111111112223345678899999999999999999999874
No 209
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=5.4e-37 Score=368.60 Aligned_cols=317 Identities=21% Similarity=0.229 Sum_probs=175.6
Q ss_pred ccccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEE
Q 039720 157 WLKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAY 236 (973)
Q Consensus 157 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 236 (973)
+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|.
T Consensus 74 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~--------- 144 (597)
T 3oja_B 74 FRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFH--------- 144 (597)
T ss_dssp CCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT---------
T ss_pred CCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhc---------
Confidence 34445555555555544555666666666677776666666666666666666666666666533222222
Q ss_pred ccCCccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceecccccCC
Q 039720 237 LFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNLG 316 (973)
Q Consensus 237 L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 316 (973)
++++|++|+|++|.+++..|..|.++++|++|+|++|++++.. +..+++|+.|++++|.++
T Consensus 145 ----------------~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~ 205 (597)
T 3oja_B 145 ----------------NTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLS 205 (597)
T ss_dssp ----------------TCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCS
T ss_pred ----------------cCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccc
Confidence 4445555555555555555555666666666666666665432 333444555555544432
Q ss_pred CCCCCChhhhhhhcccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCccccCCCccccCCCCcCEEEcccccCCC
Q 039720 317 TRTSTDLDFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEIRNLFNLNGLGLEYNQLTG 396 (973)
Q Consensus 317 ~~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 396 (973)
.+ ....+|+.|++++|.++.
T Consensus 206 ~l------------------------------------------------------------~~~~~L~~L~ls~n~l~~ 225 (597)
T 3oja_B 206 TL------------------------------------------------------------AIPIAVEELDASHNSINV 225 (597)
T ss_dssp EE------------------------------------------------------------ECCTTCSEEECCSSCCCE
T ss_pred cc------------------------------------------------------------cCCchhheeeccCCcccc
Confidence 10 111234444454444442
Q ss_pred CCCccccCCCCCCeEEccCcccCCCCCCccCCcCccceEEcCCCccccccccccccccccccccccCcccccCCCccccc
Q 039720 397 TIPPAIGELRNLQYLGLVGNNIRGIIPDPIGNLTLLNVLQLGFNKLQGSIPSYLGKCQNLMQLSAPNNKLNGTLPPQIFG 476 (973)
Q Consensus 397 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 476 (973)
..+. + .++|+.|+|++|.+++ +..+..+++|++|+|++|.+++.+|
T Consensus 226 ~~~~-~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~----------------------------- 271 (597)
T 3oja_B 226 VRGP-V--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMY----------------------------- 271 (597)
T ss_dssp EECS-C--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEES-----------------------------
T ss_pred cccc-c--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCH-----------------------------
Confidence 2111 1 1234444444444442 1233333344444444443333333
Q ss_pred cccccceeeccCCcccccCCcccccccccceeccccCcccccccccccCccchhhhcccCcccccccccchhhhccCCee
Q 039720 477 ITTLSKLLDLSENHLSGSIPLEVGNLKSLVQLDISRNNFSNEIPVTLSACTTLEYLLMQGNSFNGSIPQSLNALKSIKEL 556 (973)
Q Consensus 477 ~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 556 (973)
..|+.+++|+.|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+++|+.|
T Consensus 272 --------------------~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L 329 (597)
T 3oja_B 272 --------------------HPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENL 329 (597)
T ss_dssp --------------------GGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEE
T ss_pred --------------------HHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEE
Confidence 333444455555555555553 3444455566666666666666 566677778888888
Q ss_pred cCCCCccccccCCCCCCCCccceEeccCCcCcCcCCCCCCCCCccccccccCccccCCCCCCCCC
Q 039720 557 DLSCNNLSGQIPIHLGNLPFLEYLNLSYNHFEGKVPKKGVFSNETRISLTGNEQFCGGLGELHLP 621 (973)
Q Consensus 557 ~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~l~~~~N~~~cg~~~~~~~~ 621 (973)
+|++|+|++ +| +..+++|+.|++++|++.+..+. ..+..+....+.+++..|+.+......
T Consensus 330 ~L~~N~l~~-~~--~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~~~~~~~~ 390 (597)
T 3oja_B 330 YLDHNSIVT-LK--LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKIDYQLEHG 390 (597)
T ss_dssp ECCSSCCCC-CC--CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCCTTCEEETT
T ss_pred ECCCCCCCC-cC--hhhcCCCCEEEeeCCCCCChhHH-HHHHHHhhhccccccccCCcchhccCC
Confidence 888888874 33 66778889999999998876432 346666677788999999986654443
No 210
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-37 Score=346.22 Aligned_cols=258 Identities=26% Similarity=0.400 Sum_probs=198.5
Q ss_pred hcCCcCCccccccceeEEEEEECCCC----cEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCC
Q 039720 674 KEFSSSNRIGKGSFGFVYKGNLGEDG----MSVAVKVMNLDK-KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGA 748 (973)
Q Consensus 674 ~~y~~~~~lg~G~~g~V~~~~~~~~~----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 748 (973)
++|++.+.||+|+||+||+|++..++ ..||||+++... ......+.+|+.+++.++||||+++++++.. .
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~ 118 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK-----Y 118 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-----S
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEec-----C
Confidence 57888899999999999999986543 469999997543 3345678999999999999999999998643 4
Q ss_pred ceEEEEEeeccCCCHHHHhhhc-CCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccch
Q 039720 749 DFKAIVYEYMQYGSVDDWLHHT-NDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 827 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~ 827 (973)
...++||||+++|+|.+++... ....+..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 119 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 195 (333)
T 1mqb_A 119 KPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSR 195 (333)
T ss_dssp SSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred CCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcch
Confidence 7899999999999999999764 4567788999999999999999999 99999999999999999999999999998
Q ss_pred hccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCccHhhhhhHhcC
Q 039720 828 FLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHGYAKMALP 906 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~ 906 (973)
....... .........+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .+......
T Consensus 196 ~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--~~~~~~~~--- 265 (333)
T 1mqb_A 196 VLEDDPE-----ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH--EVMKAIND--- 265 (333)
T ss_dssp --------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHT---
T ss_pred hhccccc-----cccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHHC---
Confidence 7643210 1111222346788999999999999999999999999999999 99999754321 11111000
Q ss_pred cccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhcc
Q 039720 907 KKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVG 963 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 963 (973)
. . ....+..++..+.+++.+||+.||++||+++|+++.|+++.
T Consensus 266 ~-----~---------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 308 (333)
T 1mqb_A 266 G-----F---------RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLI 308 (333)
T ss_dssp T-----C---------CCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred C-----C---------cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 0 0 01111234456788999999999999999999999998874
No 211
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.6e-37 Score=375.46 Aligned_cols=250 Identities=22% Similarity=0.266 Sum_probs=205.4
Q ss_pred HhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecc---cchhHHHHHHHHHHHHhc-CCCCceeEEeEeeecccCC
Q 039720 672 ATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLD---KKGATKSFVAECEALRNI-RHRNLIKIITICSSIDFKG 747 (973)
Q Consensus 672 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 747 (973)
..++|++.+.||+|+||+||+|+++.+++.||||+++.. .....+.+..|..++..+ +||+|+++++++ .+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~-----~~ 413 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF-----QT 413 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEEC-----BC
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEE-----Ee
Confidence 346899999999999999999999999999999999753 233456788899999887 799999999874 45
Q ss_pred CceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccch
Q 039720 748 ADFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 827 (973)
Q Consensus 748 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~ 827 (973)
.+..++||||+++|+|.++++..+.+.+..++.++.||+.||+|||++ +|+||||||+|||++.++++||+|||+|+
T Consensus 414 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~ 490 (674)
T 3pfq_A 414 MDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK 490 (674)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCE
T ss_pred CCEEEEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceee
Confidence 688999999999999999999888889999999999999999999999 99999999999999999999999999998
Q ss_pred hccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCc
Q 039720 828 FLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPK 907 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 907 (973)
..... ........||+.|+|||++.+..|+.++|||||||++|||++|+.||...... .+ +.... ..
T Consensus 491 ~~~~~--------~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~--~~--~~~i~-~~ 557 (674)
T 3pfq_A 491 ENIWD--------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--EL--FQSIM-EH 557 (674)
T ss_dssp ECCCT--------TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HH--HHHHH-SS
T ss_pred ccccC--------CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH--HH--HHHHH-hC
Confidence 54321 22334567999999999999999999999999999999999999999754221 11 11111 00
Q ss_pred ccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCH-----HHHHH
Q 039720 908 KVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQM-----TAVVK 957 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~ 957 (973)
. ...+.....++.+++.+||+.||++||++ +||++
T Consensus 558 --------~-------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 558 --------N-------VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp --------C-------CCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred --------C-------CCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 0 01112234567788999999999999997 77765
No 212
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1e-37 Score=347.39 Aligned_cols=259 Identities=21% Similarity=0.349 Sum_probs=207.2
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCc-----EEEEEEeeccc-chhHHHHHHHHHHHHhc-CCCCceeEEeEeeeccc
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGM-----SVAVKVMNLDK-KGATKSFVAECEALRNI-RHRNLIKIITICSSIDF 745 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 745 (973)
.++|.+.+.||+|+||+||+|++..++. .||+|+++... ....+.+.+|+.+++.+ +||||+++++++..
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~--- 121 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH--- 121 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS---
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec---
Confidence 4689999999999999999999976654 89999997543 33456789999999999 89999999998654
Q ss_pred CCCceEEEEEeeccCCCHHHHhhhc--------------CCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEE
Q 039720 746 KGADFKAIVYEYMQYGSVDDWLHHT--------------NDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVL 811 (973)
Q Consensus 746 ~~~~~~~lv~e~~~~gsL~~~l~~~--------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NIL 811 (973)
....++||||+++|+|.+++... ...+...++.++.|++.||+|||+. +|+||||||+||+
T Consensus 122 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl 196 (333)
T 2i1m_A 122 --GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVL 196 (333)
T ss_dssp --SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCE
T ss_pred --CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEE
Confidence 46789999999999999998753 2346678899999999999999999 9999999999999
Q ss_pred ecCCCcEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCC
Q 039720 812 LDHDMVAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNM 890 (973)
Q Consensus 812 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~ 890 (973)
++.++.+||+|||+++...... .........+|+.|+|||++.+..++.++|||||||++|||++ |..||...
T Consensus 197 ~~~~~~~kl~Dfg~~~~~~~~~------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 270 (333)
T 2i1m_A 197 LTNGHVAKIGDFGLARDIMNDS------NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI 270 (333)
T ss_dssp EEGGGEEEBCCCGGGCCGGGCT------TSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred ECCCCeEEECcccccccccccc------ceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCccc
Confidence 9999999999999998654321 1112223457889999999999999999999999999999999 99999765
Q ss_pred CCCCccHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhcc
Q 039720 891 FNDGLTLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVG 963 (973)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 963 (973)
..... .......... ...+..++..+.+++.+||+.||++||+++|+++.|+++.
T Consensus 271 ~~~~~-~~~~~~~~~~-----------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 325 (333)
T 2i1m_A 271 LVNSK-FYKLVKDGYQ-----------------MAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325 (333)
T ss_dssp CSSHH-HHHHHHHTCC-----------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred chhHH-HHHHHhcCCC-----------------CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence 43321 1111111100 0011122456778999999999999999999999999874
No 213
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2.4e-37 Score=334.47 Aligned_cols=249 Identities=26% Similarity=0.357 Sum_probs=196.9
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCc
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK---KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGAD 749 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 749 (973)
.++|++.+.||+|+||.||+|++..+|+.||||++.... ....+.+.+|+.+++.++||||+++++++.. ..
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~ 84 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIST-----PT 84 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----SS
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEec-----CC
Confidence 368999999999999999999999899999999997542 2335678899999999999999999998654 47
Q ss_pred eEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhc
Q 039720 750 FKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 829 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~ 829 (973)
..++||||+++++|.+++.......+..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+...
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~ 161 (276)
T 2h6d_A 85 DFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMM 161 (276)
T ss_dssp EEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCC
T ss_pred eEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeeccccccc
Confidence 8999999999999999998887888889999999999999999999 9999999999999999999999999999865
Q ss_pred cCCCCccCCCCCcccccccccccccCcccccCCCC-CcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCcc
Q 039720 830 SHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDL-SMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKK 908 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 908 (973)
... .......||+.|+|||++.+..+ +.++||||||+++|+|++|+.||...... ..........
T Consensus 162 ~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~--- 227 (276)
T 2h6d_A 162 SDG---------EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP--TLFKKIRGGV--- 227 (276)
T ss_dssp CC----------------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCC---
T ss_pred CCC---------cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH--HHHHHhhcCc---
Confidence 432 12234468999999999888766 68999999999999999999999753211 1111110000
Q ss_pred cccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 909 VMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
...+......+.+++.+||+.||++||+++|+++.
T Consensus 228 ---------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 228 ---------------FYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp ---------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ---------------ccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 00011223457789999999999999999999985
No 214
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=3.3e-37 Score=361.62 Aligned_cols=252 Identities=21% Similarity=0.319 Sum_probs=200.2
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCce
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK--KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADF 750 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 750 (973)
.++|++.+.||+|+||+||+|++..++..||+|+++... ......+.+|+.+++.++||||+++++++.. ...
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~~~ 110 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFED-----KRN 110 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEEC-----SSE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-----CCE
Confidence 457999999999999999999999999999999997543 3345778999999999999999999999754 478
Q ss_pred EEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCC---CcEEEeccccch
Q 039720 751 KAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHD---MVAHVSDFGLAR 827 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~---~~~kl~Dfg~a~ 827 (973)
.++||||+.+|+|.+.+.......+..++.++.||+.||.|||+. +|+||||||+||+++.. +.+||+|||+|+
T Consensus 111 ~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~ 187 (494)
T 3lij_A 111 YYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSA 187 (494)
T ss_dssp EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCe
Confidence 999999999999999998888888899999999999999999999 99999999999999764 559999999998
Q ss_pred hccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCc
Q 039720 828 FLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPK 907 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 907 (973)
..... .......||+.|+|||++. ..|+.++||||+||++|+|++|+.||...... .+........
T Consensus 188 ~~~~~---------~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~~-- 253 (494)
T 3lij_A 188 VFENQ---------KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ--EILRKVEKGK-- 253 (494)
T ss_dssp ECBTT---------BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTC--
T ss_pred ECCCC---------ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCC--
Confidence 66432 2233456999999999876 56999999999999999999999999764322 1111111000
Q ss_pred ccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 908 KVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
. ..+ .......+..+.+++.+||+.||++|||++|+++.
T Consensus 254 ~---~~~---------~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 254 Y---TFD---------SPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp C---CCC---------SGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred C---CCC---------chhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 0 000 11112334567789999999999999999999864
No 215
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=2e-37 Score=363.06 Aligned_cols=252 Identities=25% Similarity=0.332 Sum_probs=206.8
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCc
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK---KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGAD 749 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 749 (973)
.++|++.+.||+|+||+||+|++..+|+.||||++.... ....+.+.+|+.++++++||||+++++++.. ..
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~~ 99 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFED-----KG 99 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----SS
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-----CC
Confidence 458999999999999999999999999999999996542 3356789999999999999999999998654 47
Q ss_pred eEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe---cCCCcEEEeccccc
Q 039720 750 FKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLL---DHDMVAHVSDFGLA 826 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl---~~~~~~kl~Dfg~a 826 (973)
..++||||+.+|+|.+++......++..++.++.||+.||.|||++ +|+||||||+||++ +.++.+||+|||++
T Consensus 100 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a 176 (484)
T 3nyv_A 100 YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS 176 (484)
T ss_dssp EEEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHH
T ss_pred EEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeee
Confidence 8999999999999999998888888899999999999999999999 99999999999999 56789999999999
Q ss_pred hhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcC
Q 039720 827 RFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALP 906 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 906 (973)
+..... .......||+.|+|||++.+ .|+.++||||+||++|+|++|+.||...... .+.......
T Consensus 177 ~~~~~~---------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~-- 242 (484)
T 3nyv_A 177 THFEAS---------KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY--DILKKVEKG-- 242 (484)
T ss_dssp HHBCCC---------CSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHC--
T ss_pred EEcccc---------cccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHcC--
Confidence 876432 22344579999999999876 6899999999999999999999999754321 111111100
Q ss_pred cccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 907 KKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
. ... ........+..+.+++.+||+.||++|||++|++++
T Consensus 243 ~-----~~~-------~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 243 K-----YTF-------ELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp C-----CCC-------CSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred C-----CCC-------CCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 0 000 011122344567789999999999999999999874
No 216
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-37 Score=348.00 Aligned_cols=269 Identities=20% Similarity=0.255 Sum_probs=197.7
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecc--cchhHHHHHHHHHHHHhcCCCCceeEEeEeeecc-cCCCc
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLD--KKGATKSFVAECEALRNIRHRNLIKIITICSSID-FKGAD 749 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~~~ 749 (973)
.++|++.+.||+|+||+||+|++..+|+.||||++... .....+.+.+|+++++.++||||+++++++.... .....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 35799999999999999999999999999999999543 2334567899999999999999999999876431 12234
Q ss_pred eEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhc
Q 039720 750 FKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 829 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~ 829 (973)
..++||||+ +++|.+++.. ....+..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 178 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQA 178 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred eEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeeccccc
Confidence 579999999 8899999876 4567788999999999999999999 9999999999999999999999999999865
Q ss_pred cCCCCccCCCCCcccccccccccccCcccccC-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHh--cC
Q 039720 830 SHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMG-GDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMA--LP 906 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~--~~ 906 (973)
.. ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||....... .+....... .+
T Consensus 179 ~~-----------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~~~ 246 (367)
T 1cm8_A 179 DS-----------EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD-QLKEIMKVTGTPP 246 (367)
T ss_dssp CS-----------SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCC
T ss_pred cc-----------ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCC
Confidence 32 1234568999999999877 689999999999999999999999997543211 111111100 00
Q ss_pred cccccccCc--------cccc--ccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 907 KKVMGIVDP--------SLLM--EARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 907 ~~~~~~~~~--------~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
......+.. .+.. ..............+.+++.+|++.||++|||++|++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 247 AEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 000000000 0000 000001112334567789999999999999999999884
No 217
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.5e-38 Score=347.13 Aligned_cols=274 Identities=21% Similarity=0.286 Sum_probs=197.4
Q ss_pred hcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccch-hHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceEE
Q 039720 674 KEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKG-ATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFKA 752 (973)
Q Consensus 674 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 752 (973)
++|++.+.||+|+||+||+|++..+++.||+|+++..... ....+.+|+++++.++||||+++++++.. ....+
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~ 76 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHT-----EKSLT 76 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEEC-----SSCEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEee-----CCEEE
Confidence 5799999999999999999999999999999999754321 12245679999999999999999998654 47899
Q ss_pred EEEeeccCCCHHHHhhhcC-CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhccC
Q 039720 753 IVYEYMQYGSVDDWLHHTN-DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLSH 831 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~~ 831 (973)
+||||+. |+|.+++...+ ...+..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 77 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 152 (324)
T 3mtl_A 77 LVFEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSI 152 (324)
T ss_dssp EEEECCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC--
T ss_pred EEecccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccC
Confidence 9999998 58888887654 466788899999999999999999 999999999999999999999999999975432
Q ss_pred CCCccCCCCCcccccccccccccCcccccC-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhc---Cc
Q 039720 832 HPFLVAPEGQSSSIEMKGTIGYIGPEYGMG-GDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMAL---PK 907 (973)
Q Consensus 832 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~---~~ 907 (973)
. ........||+.|+|||++.+ ..++.++||||+||++|+|++|+.||......+ .+........ ..
T Consensus 153 ~--------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~ 223 (324)
T 3mtl_A 153 P--------TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE-QLHFIFRILGTPTEE 223 (324)
T ss_dssp ------------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTT
T ss_pred C--------ccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChH
Confidence 1 122234568999999999876 578999999999999999999999998653321 1111111110 00
Q ss_pred ccccccCccccc-----ccCC---CchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH--HHHhcccc
Q 039720 908 KVMGIVDPSLLM-----EARG---PSKFEECLVAVVRTGVACSMESPSERMQMTAVVK--KLCAVGEI 965 (973)
Q Consensus 908 ~~~~~~~~~~~~-----~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~~~~~ 965 (973)
............ .... ..........+.+++.+||+.||++|||++|+++ .+.++.+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~ 291 (324)
T 3mtl_A 224 TWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGER 291 (324)
T ss_dssp TSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCST
T ss_pred hchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcccc
Confidence 000000000000 0000 0011123456778999999999999999999988 34455443
No 218
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1e-37 Score=346.27 Aligned_cols=264 Identities=25% Similarity=0.394 Sum_probs=207.0
Q ss_pred cCCCcccHHHHHHHhhcCCcCCccccccceeEEEEEECCCCcEE--EEEEeeccc-chhHHHHHHHHHHHHhc-CCCCce
Q 039720 659 QQFPIVSYAELSKATKEFSSSNRIGKGSFGFVYKGNLGEDGMSV--AVKVMNLDK-KGATKSFVAECEALRNI-RHRNLI 734 (973)
Q Consensus 659 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~v--avK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv 734 (973)
..+|.+.+ ++|++.+.||+|+||.||+|++..++..+ |+|+++... ....+.+.+|+++++++ +||||+
T Consensus 17 ~~~p~~~~-------~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv 89 (327)
T 1fvr_A 17 TIYPVLDW-------NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89 (327)
T ss_dssp CCSSBCCG-------GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBC
T ss_pred cccccccH-------HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchh
Confidence 44565554 57999999999999999999998888865 999887432 33456788999999999 899999
Q ss_pred eEEeEeeecccCCCceEEEEEeeccCCCHHHHhhhcC----------------CCchhhHHHHHHHHHHHHHHHHhcCCC
Q 039720 735 KIITICSSIDFKGADFKAIVYEYMQYGSVDDWLHHTN----------------DKLEVGKLNIVIEVASVIEYLHNHCQP 798 (973)
Q Consensus 735 ~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~----------------~~~~~~~~~i~~qi~~aL~~LH~~~~~ 798 (973)
++++++.. ....++||||+++|+|.+++.... ..++..++.++.|++.||+|||+.
T Consensus 90 ~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--- 161 (327)
T 1fvr_A 90 NLLGACEH-----RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK--- 161 (327)
T ss_dssp CEEEEEEE-----TTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred hhceeeee-----CCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---
Confidence 99999755 378999999999999999997654 567788999999999999999999
Q ss_pred CeEecCCCCCcEEecCCCcEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHH
Q 039720 799 PIVHGDLKPSNVLLDHDMVAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLL 878 (973)
Q Consensus 799 ~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ 878 (973)
+|+||||||+||+++.++.+||+|||+++.... ........+++.|+|||++.+..++.++|||||||++|
T Consensus 162 ~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~---------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 232 (327)
T 1fvr_A 162 QFIHRDLAARNILVGENYVAKIADFGLSRGQEV---------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLW 232 (327)
T ss_dssp TEECSCCSGGGEEECGGGCEEECCTTCEESSCE---------ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHH
T ss_pred CccCCCCccceEEEcCCCeEEEcccCcCccccc---------cccccCCCCCccccChhhhccccCCchhcchHHHHHHH
Confidence 999999999999999999999999999874321 11122345788999999998888999999999999999
Q ss_pred HHHh-CCCCCCCCCCCCccHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 039720 879 EMFT-RRRPTDNMFNDGLTLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVK 957 (973)
Q Consensus 879 ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 957 (973)
||++ |+.||...... ...... ... .. ...+..++..+.+++.+||+.||++||+++|+++
T Consensus 233 ellt~g~~pf~~~~~~-----~~~~~~-~~~----~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 293 (327)
T 1fvr_A 233 EIVSLGGTPYCGMTCA-----ELYEKL-PQG----YR---------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 293 (327)
T ss_dssp HHHTTSCCTTTTCCHH-----HHHHHG-GGT----CC---------CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHcCCCCCCCCCcHH-----HHHHHh-hcC----CC---------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 9998 99999754321 111100 000 00 1111233456788999999999999999999999
Q ss_pred HHHhcccc
Q 039720 958 KLCAVGEI 965 (973)
Q Consensus 958 ~L~~~~~~ 965 (973)
.|+++.+.
T Consensus 294 ~L~~~~~~ 301 (327)
T 1fvr_A 294 SLNRMLEE 301 (327)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHHh
Confidence 99987543
No 219
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.2e-37 Score=373.74 Aligned_cols=251 Identities=24% Similarity=0.353 Sum_probs=200.5
Q ss_pred CccccccceeEEEEEE--CCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceEEEEE
Q 039720 680 NRIGKGSFGFVYKGNL--GEDGMSVAVKVMNLDK--KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFKAIVY 755 (973)
Q Consensus 680 ~~lg~G~~g~V~~~~~--~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 755 (973)
+.||+|+||+||+|.+ ..+++.||||+++... ....+++.+|++++++++||||++++++|.. +..++||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------~~~~lv~ 448 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA------ESWMLVM 448 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES------SSEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec------CCEEEEE
Confidence 4799999999999955 4567899999997543 2345789999999999999999999998743 4588999
Q ss_pred eeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhccCCCCc
Q 039720 756 EYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLSHHPFL 835 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~~~~~~ 835 (973)
||+++|+|.+++.......+..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.......
T Consensus 449 E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~- 524 (635)
T 4fl3_A 449 EMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN- 524 (635)
T ss_dssp ECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred EccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcc-
Confidence 9999999999998888888889999999999999999999 999999999999999999999999999987654221
Q ss_pred cCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCccHhhhhhHhcCcccccccC
Q 039720 836 VAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHGYAKMALPKKVMGIVD 914 (973)
Q Consensus 836 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (973)
.........+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+ +.......
T Consensus 525 ----~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--~~~~i~~~---------- 588 (635)
T 4fl3_A 525 ----YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--VTAMLEKG---------- 588 (635)
T ss_dssp --------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHHHTT----------
T ss_pred ----ccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcC----------
Confidence 1112223456788999999999999999999999999999998 999997653321 11111100
Q ss_pred cccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhcc
Q 039720 915 PSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVG 963 (973)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 963 (973)
.....+..++..+.++|.+||+.||++||++++|++.|+++-
T Consensus 589 -------~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 630 (635)
T 4fl3_A 589 -------ERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 630 (635)
T ss_dssp -------CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred -------CCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 001112334567889999999999999999999999999864
No 220
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.9e-37 Score=345.31 Aligned_cols=271 Identities=22% Similarity=0.316 Sum_probs=197.5
Q ss_pred HHhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccch-----hHHHHHHHHHHHHhcCCCCceeEEeEeeeccc
Q 039720 671 KATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKG-----ATKSFVAECEALRNIRHRNLIKIITICSSIDF 745 (973)
Q Consensus 671 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 745 (973)
...++|++.+.||+|+||+||+|++..+|+.||||+++..... ....+.+|+++++.++||||+++++++..
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--- 83 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGH--- 83 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECC---
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEee---
Confidence 4457899999999999999999999999999999999753321 12467899999999999999999998643
Q ss_pred CCCceEEEEEeeccCCCHHHHhhhcC-CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccc
Q 039720 746 KGADFKAIVYEYMQYGSVDDWLHHTN-DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 824 (973)
Q Consensus 746 ~~~~~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg 824 (973)
....++||||+++ +|.+++.... ...+..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 84 --~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg 157 (346)
T 1ua2_A 84 --KSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFG 157 (346)
T ss_dssp --TTCCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCG
T ss_pred --CCceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecc
Confidence 4788999999986 8888887643 466788999999999999999999 99999999999999999999999999
Q ss_pred cchhccCCCCccCCCCCcccccccccccccCcccccCC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhH
Q 039720 825 LARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGG-DLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKM 903 (973)
Q Consensus 825 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~ 903 (973)
+++..... ........||+.|+|||++.+. .++.++|||||||++|||++|..||....... .+......
T Consensus 158 ~a~~~~~~--------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~-~~~~i~~~ 228 (346)
T 1ua2_A 158 LAKSFGSP--------NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD-QLTRIFET 228 (346)
T ss_dssp GGSTTTSC--------CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHH
T ss_pred cceeccCC--------cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHH
Confidence 99865432 1223345689999999998764 58999999999999999999999987643221 11111111
Q ss_pred -hcC--cccc---cccCcccccccCC-C--chhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 039720 904 -ALP--KKVM---GIVDPSLLMEARG-P--SKFEECLVAVVRTGVACSMESPSERMQMTAVVKKL 959 (973)
Q Consensus 904 -~~~--~~~~---~~~~~~~~~~~~~-~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 959 (973)
..+ .... ...+......... + .........+.+++.+||+.||++|||++|+++.-
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~ 293 (346)
T 1ua2_A 229 LGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK 293 (346)
T ss_dssp HCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred cCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence 000 0000 0000000000000 0 01123346788999999999999999999998764
No 221
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.7e-36 Score=355.04 Aligned_cols=320 Identities=19% Similarity=0.195 Sum_probs=229.8
Q ss_pred ceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccCC
Q 039720 161 ERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKN 240 (973)
Q Consensus 161 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 240 (973)
+.++.++++++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|.+++..|.+|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 56777788887 6777664 57888999999998777888899999999999999998888888999999999999999
Q ss_pred ccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceecccccCCCCCC
Q 039720 241 RFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNLGTRTS 320 (973)
Q Consensus 241 ~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 320 (973)
+++ .+|...+.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|+++.++
T Consensus 91 ~l~-~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~- 168 (477)
T 2id5_A 91 RLK-LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIP- 168 (477)
T ss_dssp CCC-SCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCC-
T ss_pred cCC-ccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccC-
Confidence 988 677776668999999999999999888899999999999999999999888889999999999999988875422
Q ss_pred CChhhhhhhcccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCccccCCCccccCCCCcCEEEcccccCCCCCCc
Q 039720 321 TDLDFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEIRNLFNLNGLGLEYNQLTGTIPP 400 (973)
Q Consensus 321 ~~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 400 (973)
+..+..+++|+.|+|++|.+++..+.
T Consensus 169 ------------------------------------------------------~~~l~~l~~L~~L~l~~n~i~~~~~~ 194 (477)
T 2id5_A 169 ------------------------------------------------------TEALSHLHGLIVLRLRHLNINAIRDY 194 (477)
T ss_dssp ------------------------------------------------------HHHHTTCTTCCEEEEESCCCCEECTT
T ss_pred ------------------------------------------------------hhHhcccCCCcEEeCCCCcCcEeChh
Confidence 22345556666777777776666666
Q ss_pred cccCCCCCCeEEccCcccCCCCCCccCCcCccceEEcCCCccccccccccccccccccccccCcccccCCCccccccccc
Q 039720 401 AIGELRNLQYLGLVGNNIRGIIPDPIGNLTLLNVLQLGFNKLQGSIPSYLGKCQNLMQLSAPNNKLNGTLPPQIFGITTL 480 (973)
Q Consensus 401 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l 480 (973)
.|..+++|++|++++|.+.+.+|..+....+|++|++++|++++..+..+..+++|+.|++++|++.+..+..+..+..+
T Consensus 195 ~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 274 (477)
T 2id5_A 195 SFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRL 274 (477)
T ss_dssp CSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTC
T ss_pred hcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccC
Confidence 66677777777777766666666655555667777777777764444556666666666666666653222222222222
Q ss_pred cceeeccCCcccccCCcccccccccceeccccCcccccccccccCccchhhhcccCcccc
Q 039720 481 SKLLDLSENHLSGSIPLEVGNLKSLVQLDISRNNFSNEIPVTLSACTTLEYLLMQGNSFN 540 (973)
Q Consensus 481 ~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 540 (973)
+.|+|++|++++..|..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++.
T Consensus 275 -~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 333 (477)
T 2id5_A 275 -QEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLA 333 (477)
T ss_dssp -CEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEE
T ss_pred -CEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCcc
Confidence 24555555555555555556666666666666666555555556666666666666655
No 222
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=3.1e-37 Score=350.04 Aligned_cols=251 Identities=22% Similarity=0.350 Sum_probs=195.1
Q ss_pred hcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhcC--CCCceeEEeEeeecccCCCc
Q 039720 674 KEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK--KGATKSFVAECEALRNIR--HRNLIKIITICSSIDFKGAD 749 (973)
Q Consensus 674 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~~~ 749 (973)
++|++.+.||+|+||+||+|.+. +++.||||++.... ....+.+.+|+.+++.+. ||||+++++++.. .+
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~-----~~ 129 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT-----DQ 129 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----SS
T ss_pred CceEEEEEEccCCCeEEEEEEcC-CCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEec-----CC
Confidence 46999999999999999999986 59999999997543 334577899999999996 5999999998654 36
Q ss_pred eEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhc
Q 039720 750 FKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 829 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~ 829 (973)
..++||| +.+++|.+++.......+.+++.++.||+.||.|||+. +|+||||||+|||++ ++.+||+|||+++..
T Consensus 130 ~~~lv~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~ 204 (390)
T 2zmd_A 130 YIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQM 204 (390)
T ss_dssp EEEEEEE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC
T ss_pred EEEEEEe-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccc
Confidence 7999999 66889999999887778888999999999999999999 999999999999995 589999999999865
Q ss_pred cCCCCccCCCCCcccccccccccccCcccccC-----------CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHh
Q 039720 830 SHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMG-----------GDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLH 898 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~ 898 (973)
.... .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.........+.
T Consensus 205 ~~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~ 278 (390)
T 2zmd_A 205 QPDT------TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH 278 (390)
T ss_dssp ---------------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHH
T ss_pred cCCC------ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHH
Confidence 4321 1112234579999999999865 4689999999999999999999999975432211111
Q ss_pred hhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 899 GYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
. . ++....... +. .....+.+++.+||+.||++||+++|+++.
T Consensus 279 ~---~---------~~~~~~~~~--~~---~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 279 A---I---------IDPNHEIEF--PD---IPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp H---H---------HCTTSCCCC--CC---CSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred H---H---------hCccccCCC--Cc---cchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 1 1 111111011 11 113456788999999999999999999865
No 223
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.6e-37 Score=352.43 Aligned_cols=270 Identities=19% Similarity=0.221 Sum_probs=196.3
Q ss_pred HHHhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeeccc----
Q 039720 670 SKATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDF---- 745 (973)
Q Consensus 670 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~---- 745 (973)
....++|++.+.||+|+||+||+|++..+|+.||||++..+... ..+|+++++.++||||+++++++.....
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 34567899999999999999999999999999999999754332 2369999999999999999998754321
Q ss_pred -----------------------------CCCceEEEEEeeccCCCHHHHhh----hcCCCchhhHHHHHHHHHHHHHHH
Q 039720 746 -----------------------------KGADFKAIVYEYMQYGSVDDWLH----HTNDKLEVGKLNIVIEVASVIEYL 792 (973)
Q Consensus 746 -----------------------------~~~~~~~lv~e~~~~gsL~~~l~----~~~~~~~~~~~~i~~qi~~aL~~L 792 (973)
.+....++||||+++ +|.+.+. .....++..++.++.||+.||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 334568899999984 7766654 345677888999999999999999
Q ss_pred HhcCCCCeEecCCCCCcEEec-CCCcEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCC-CCCcccch
Q 039720 793 HNHCQPPIVHGDLKPSNVLLD-HDMVAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGG-DLSMTGDV 870 (973)
Q Consensus 793 H~~~~~~ivHrDik~~NILl~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv 870 (973)
|+. +|+||||||+||+++ .++.+||+|||+|+..... .......||+.|+|||++.+. .++.++||
T Consensus 158 H~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~---------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di 225 (383)
T 3eb0_A 158 HSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPS---------EPSVAYICSRFYRAPELMLGATEYTPSIDL 225 (383)
T ss_dssp HTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTT---------SCCCCCCCCSSCCCHHHHTTCSSCCTHHHH
T ss_pred HHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCC---------CCCcCcccCCCccCHHHhcCCCCCCcchhh
Confidence 999 999999999999998 6889999999999865432 222345689999999998775 48999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCccc--ccccCcc-----c---ccccCCCchhHHHHHHHHHHHhh
Q 039720 871 YSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKV--MGIVDPS-----L---LMEARGPSKFEECLVAVVRTGVA 940 (973)
Q Consensus 871 wSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-----~---~~~~~~~~~~~~~~~~l~~li~~ 940 (973)
||+||++|||++|+.||......+ .+............ ....++. + .........+...+..+.+++.+
T Consensus 226 wslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 304 (383)
T 3eb0_A 226 WSIGCVFGELILGKPLFSGETSID-QLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQ 304 (383)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHH
T ss_pred hhHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHH
Confidence 999999999999999998643221 11111111100000 0000000 0 00000000111234567899999
Q ss_pred cCCCCCCCCCCHHHHHH
Q 039720 941 CSMESPSERMQMTAVVK 957 (973)
Q Consensus 941 cl~~dP~~RPs~~evl~ 957 (973)
||+.||++|||+.|+++
T Consensus 305 ~L~~dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 305 ILRYEPDLRINPYEAMA 321 (383)
T ss_dssp HCCSSGGGSCCHHHHHT
T ss_pred HccCChhhCCCHHHHhc
Confidence 99999999999999985
No 224
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=4.8e-38 Score=348.24 Aligned_cols=262 Identities=21% Similarity=0.367 Sum_probs=207.8
Q ss_pred HHHhhcCCcCCccccccceeEEEEEEC-----CCCcEEEEEEeecccc-hhHHHHHHHHHHHHhcCCCCceeEEeEeeec
Q 039720 670 SKATKEFSSSNRIGKGSFGFVYKGNLG-----EDGMSVAVKVMNLDKK-GATKSFVAECEALRNIRHRNLIKIITICSSI 743 (973)
Q Consensus 670 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 743 (973)
....++|++.+.||+|+||+||+|++. .+++.||||++..... .....+.+|+.+++.++||||+++++++..
T Consensus 21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~- 99 (322)
T 1p4o_A 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ- 99 (322)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECS-
T ss_pred cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEcc-
Confidence 345678999999999999999999875 3578999999975432 345678999999999999999999998643
Q ss_pred ccCCCceEEEEEeeccCCCHHHHhhhc----------CCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEec
Q 039720 744 DFKGADFKAIVYEYMQYGSVDDWLHHT----------NDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLD 813 (973)
Q Consensus 744 ~~~~~~~~~lv~e~~~~gsL~~~l~~~----------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~ 813 (973)
....++||||+++|+|.+++... .......++.++.|++.||.|||++ +|+||||||+||+++
T Consensus 100 ----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~ 172 (322)
T 1p4o_A 100 ----GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVA 172 (322)
T ss_dssp ----SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEEC
T ss_pred ----CCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEc
Confidence 46789999999999999998753 2345678899999999999999999 999999999999999
Q ss_pred CCCcEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCC
Q 039720 814 HDMVAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFN 892 (973)
Q Consensus 814 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~ 892 (973)
.++.+||+|||+++...... .........+|+.|+|||++.+..++.++|||||||++|+|++ |+.||.....
T Consensus 173 ~~~~~kl~Dfg~~~~~~~~~------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 246 (322)
T 1p4o_A 173 EDFTVKIGDFGMTRDIYETD------YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 246 (322)
T ss_dssp TTCCEEECCTTCCCGGGGGG------CEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH
T ss_pred CCCeEEECcCcccccccccc------ccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH
Confidence 99999999999998654321 1112223457889999999999999999999999999999999 8999875422
Q ss_pred CCccHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccc
Q 039720 893 DGLTLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGE 964 (973)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 964 (973)
. .... ...... . ...+..++..+.+++.+||+.||++||++.|+++.|+++.+
T Consensus 247 ~--~~~~---~~~~~~--------~------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 247 E--QVLR---FVMEGG--------L------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp H--HHHH---HHHTTC--------C------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred H--HHHH---HHHcCC--------c------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 1 1111 110000 0 11112334567789999999999999999999999998743
No 225
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=9.2e-37 Score=342.19 Aligned_cols=277 Identities=20% Similarity=0.309 Sum_probs=203.0
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccc--hhHHHHHHHHHHHHhcCCCCceeEEeEeeeccc---CC
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKK--GATKSFVAECEALRNIRHRNLIKIITICSSIDF---KG 747 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~---~~ 747 (973)
.++|++.+.||+|+||+||+|++..+|+.||||++..... .....+.+|+.+++.++||||+++++++..... ..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 4689999999999999999999999999999999865432 234678899999999999999999999876321 12
Q ss_pred CceEEEEEeeccCCCHHHHhhh-cCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccc
Q 039720 748 ADFKAIVYEYMQYGSVDDWLHH-TNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 826 (973)
Q Consensus 748 ~~~~~lv~e~~~~gsL~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a 826 (973)
....++||||+.+ ++.+.+.. ....++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 4578999999986 66666654 35677888999999999999999999 9999999999999999999999999999
Q ss_pred hhccCCCCccCCCCCcccccccccccccCcccccC-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHh-
Q 039720 827 RFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMG-GDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMA- 904 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~- 904 (973)
+.+..... ..........||+.|+|||++.+ ..++.++|||||||++|+|++|+.||....... .........
T Consensus 172 ~~~~~~~~----~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~ 246 (351)
T 3mi9_A 172 RAFSLAKN----SQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH-QLALISQLCG 246 (351)
T ss_dssp EECCCCSS----SSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHC
T ss_pred cccccccc----ccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhC
Confidence 87643221 11222334568999999998876 467999999999999999999999998643321 111111111
Q ss_pred -cCccc-ccccCcccc-----cccCCCchhHH-----HHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 905 -LPKKV-MGIVDPSLL-----MEARGPSKFEE-----CLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 905 -~~~~~-~~~~~~~~~-----~~~~~~~~~~~-----~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
.+... ......... ........... ....+.+++.+||+.||++|||++|+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 247 SITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp CCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 00000 000000000 00000111111 13457899999999999999999999875
No 226
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.8e-38 Score=359.35 Aligned_cols=251 Identities=14% Similarity=0.168 Sum_probs=190.6
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecc---cchhHHHHHHHH---HHHHhcCCCCceeEE-------eE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLD---KKGATKSFVAEC---EALRNIRHRNLIKII-------TI 739 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~---~~l~~l~h~niv~~~-------~~ 739 (973)
.++|++.+.||+|+||+||+|++..+|+.||||++... .....+.+.+|+ ++++.++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46799999999999999999999889999999999743 334567788999 455566899999988 44
Q ss_pred eeecc-------cCCCc-----eEEEEEeeccCCCHHHHhhhcCCCch-------hhHHHHHHHHHHHHHHHHhcCCCCe
Q 039720 740 CSSID-------FKGAD-----FKAIVYEYMQYGSVDDWLHHTNDKLE-------VGKLNIVIEVASVIEYLHNHCQPPI 800 (973)
Q Consensus 740 ~~~~~-------~~~~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~-------~~~~~i~~qi~~aL~~LH~~~~~~i 800 (973)
+.... +.+.. ..++||||+ +|+|.+++...+...+ ..++.++.||+.||+|||++ +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 33210 00111 378999999 6899999987554444 66778999999999999999 99
Q ss_pred EecCCCCCcEEecCCCcEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCC-----------CCCcccc
Q 039720 801 VHGDLKPSNVLLDHDMVAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGG-----------DLSMTGD 869 (973)
Q Consensus 801 vHrDik~~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~sD 869 (973)
+||||||+|||++.++.+||+|||+|+... .......| +.|+|||++.+. .++.++|
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~-----------~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~D 295 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDG-----------ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFD 295 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETT-----------CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecC-----------CcccCCCC-cCccChhhhcccccccccccccccCChhhh
Confidence 999999999999999999999999998532 12234467 899999999887 8999999
Q ss_pred hHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCC
Q 039720 870 VYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSER 949 (973)
Q Consensus 870 vwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 949 (973)
||||||++|||++|+.||......... ..+.. . ...++..+.+++.+||+.||++|
T Consensus 296 vwSlG~il~elltg~~Pf~~~~~~~~~-------------~~~~~-----~------~~~~~~~~~~li~~~L~~dp~~R 351 (377)
T 3byv_A 296 AWALGLVIYWIWCADLPITKDAALGGS-------------EWIFR-----S------CKNIPQPVRALLEGFLRYPKEDR 351 (377)
T ss_dssp HHHHHHHHHHHHHSSCCC------CCS-------------GGGGS-----S------CCCCCHHHHHHHHHHTCSSGGGC
T ss_pred HHHHHHHHHHHHHCCCCCcccccccch-------------hhhhh-----h------ccCCCHHHHHHHHHHcCCCchhC
Confidence 999999999999999999754322110 00000 0 01223467789999999999999
Q ss_pred CCHHHHHH--HHHhcc
Q 039720 950 MQMTAVVK--KLCAVG 963 (973)
Q Consensus 950 Ps~~evl~--~L~~~~ 963 (973)
|++.|+++ .++++.
T Consensus 352 pt~~e~l~hp~f~~~~ 367 (377)
T 3byv_A 352 LLPLQAMETPEYEQLR 367 (377)
T ss_dssp CCHHHHHTSHHHHHHH
T ss_pred CCHHHHhhChHHHHHH
Confidence 99999986 444443
No 227
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=4.9e-37 Score=335.56 Aligned_cols=251 Identities=23% Similarity=0.343 Sum_probs=196.8
Q ss_pred cCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceEEEE
Q 039720 675 EFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFKAIV 754 (973)
Q Consensus 675 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 754 (973)
+|.....||+|+||+||+|++..+++.||||++........+.+.+|+.+++.++||||+++++++.. ....++|
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~~~lv 97 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSE-----NGFIKIF 97 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEE-----TTEEEEE
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEe-----CCcEEEE
Confidence 45555689999999999999999999999999987666667789999999999999999999998765 3789999
Q ss_pred EeeccCCCHHHHhhhcC---CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecC-CCcEEEeccccchhcc
Q 039720 755 YEYMQYGSVDDWLHHTN---DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDH-DMVAHVSDFGLARFLS 830 (973)
Q Consensus 755 ~e~~~~gsL~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~-~~~~kl~Dfg~a~~~~ 830 (973)
|||+++++|.+++.... ...+..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||.++...
T Consensus 98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~ 174 (295)
T 2clq_A 98 MEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA 174 (295)
T ss_dssp EECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESC
T ss_pred EEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccC
Confidence 99999999999997653 234567788999999999999999 9999999999999987 8999999999998654
Q ss_pred CCCCccCCCCCcccccccccccccCcccccCCC--CCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCcc
Q 039720 831 HHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGD--LSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKK 908 (973)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 908 (973)
.. ........||+.|+|||++.+.. ++.++||||||+++|+|++|+.||................
T Consensus 175 ~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~----- 241 (295)
T 2clq_A 175 GI--------NPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMF----- 241 (295)
T ss_dssp C-------------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHH-----
T ss_pred CC--------CCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccc-----
Confidence 32 11223456899999999987643 7899999999999999999999997543221111110000
Q ss_pred cccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 909 VMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
... +..+..++..+.+++.+||+.||++||+++|+++.
T Consensus 242 ---~~~---------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 242 ---KVH---------PEIPESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp ---CCC---------CCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred ---ccc---------ccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 000 11112334567789999999999999999999863
No 228
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=4.3e-37 Score=337.45 Aligned_cols=251 Identities=24% Similarity=0.306 Sum_probs=205.4
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK-KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFK 751 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 751 (973)
.+.|++.+.||+|+||+||+|++..+++.||||++.... ....+.+.+|+.+++.++||||+++++++.. ....
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 95 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-----DTKL 95 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----TTEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec-----CCeE
Confidence 457999999999999999999999999999999997553 3456789999999999999999999998765 3789
Q ss_pred EEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhccC
Q 039720 752 AIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLSH 831 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~~ 831 (973)
++||||+++++|.+++.. ...++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||.+.....
T Consensus 96 ~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 171 (303)
T 3a7i_A 96 WIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD 171 (303)
T ss_dssp EEEEECCTTEEHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBT
T ss_pred EEEEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCc
Confidence 999999999999999875 4567788999999999999999999 999999999999999999999999999986543
Q ss_pred CCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCccccc
Q 039720 832 HPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKVMG 911 (973)
Q Consensus 832 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
. ........||+.|+|||++.+..++.++||||||+++|+|++|+.||....... ........
T Consensus 172 ~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~------- 234 (303)
T 3a7i_A 172 T--------QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK--VLFLIPKN------- 234 (303)
T ss_dssp T--------BCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHS-------
T ss_pred c--------ccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH--HHHHhhcC-------
Confidence 2 112234568999999999999999999999999999999999999997542211 11110000
Q ss_pred ccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 039720 912 IVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKL 959 (973)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 959 (973)
.. +.....++..+.+++.+||+.||++|||++|+++..
T Consensus 235 -~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 235 -NP---------PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp -CC---------CCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred -CC---------CCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 00 011112234577899999999999999999998754
No 229
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=2.5e-37 Score=342.96 Aligned_cols=257 Identities=19% Similarity=0.284 Sum_probs=202.9
Q ss_pred HHHHhhcCCcC-CccccccceeEEEEEECCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhcC-CCCceeEEeEeeecc
Q 039720 669 LSKATKEFSSS-NRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK--KGATKSFVAECEALRNIR-HRNLIKIITICSSID 744 (973)
Q Consensus 669 ~~~~~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~ 744 (973)
.....++|.+. +.||+|+||+||+|++..+++.||+|+++... ......+.+|+.+++.+. ||||+++++++..
T Consensus 23 ~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~-- 100 (327)
T 3lm5_A 23 MENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYEN-- 100 (327)
T ss_dssp HHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEEC--
T ss_pred HHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEe--
Confidence 33456788887 88999999999999999999999999997543 334578899999999995 6999999998654
Q ss_pred cCCCceEEEEEeeccCCCHHHHhhhc--CCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecC---CCcEE
Q 039720 745 FKGADFKAIVYEYMQYGSVDDWLHHT--NDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDH---DMVAH 819 (973)
Q Consensus 745 ~~~~~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~---~~~~k 819 (973)
....++||||+.+|+|.+++... ....+..++.++.|++.||+|||+. +|+||||||+||+++. ++.+|
T Consensus 101 ---~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~k 174 (327)
T 3lm5_A 101 ---TSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIK 174 (327)
T ss_dssp ---SSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEE
T ss_pred ---CCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEE
Confidence 47899999999999999998653 5567788999999999999999999 9999999999999988 78999
Q ss_pred EeccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhh
Q 039720 820 VSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHG 899 (973)
Q Consensus 820 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~ 899 (973)
|+|||+++..... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||........
T Consensus 175 L~Dfg~a~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~---- 241 (327)
T 3lm5_A 175 IVDFGMSRKIGHA---------CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET---- 241 (327)
T ss_dssp ECCGGGCEEC------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----
T ss_pred EeeCccccccCCc---------cccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH----
Confidence 9999999866432 122345699999999999999999999999999999999999999975432211
Q ss_pred hhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 900 YAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
....... .... .......+...+.+++.+||+.||++|||++|+++.
T Consensus 242 ~~~i~~~-------~~~~-----~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 242 YLNISQV-------NVDY-----SEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp HHHHHHT-------CCCC-----CTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred HHHHHhc-------cccc-----CchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 1110000 0000 011122344567789999999999999999999875
No 230
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.4e-37 Score=351.50 Aligned_cols=259 Identities=9% Similarity=0.023 Sum_probs=182.9
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccc---hhHHHHHHHHHHHHhc--CCCCceeEE-------eEe
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKK---GATKSFVAECEALRNI--RHRNLIKII-------TIC 740 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l--~h~niv~~~-------~~~ 740 (973)
..+|.+.+.||+|+||+||+|++..+|+.||||+++.... ...+.+.+|+.+++.+ +|||+++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 3459999999999999999999999999999999986542 3345677785544444 699988855 332
Q ss_pred eeccc------------CCCceEEEEEeeccCCCHHHHhhhcCC-CchhhH------HHHHHHHHHHHHHHHhcCCCCeE
Q 039720 741 SSIDF------------KGADFKAIVYEYMQYGSVDDWLHHTND-KLEVGK------LNIVIEVASVIEYLHNHCQPPIV 801 (973)
Q Consensus 741 ~~~~~------------~~~~~~~lv~e~~~~gsL~~~l~~~~~-~~~~~~------~~i~~qi~~aL~~LH~~~~~~iv 801 (973)
..... ......++||||++ |+|.+++...+. .....+ ..++.||+.||+|||++ +|+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~iv 216 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSK---GLV 216 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCc
Confidence 22100 00145899999999 899999986432 233444 57779999999999999 999
Q ss_pred ecCCCCCcEEecCCCcEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccC--CCCCcccchHHHHHHHHH
Q 039720 802 HGDLKPSNVLLDHDMVAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMG--GDLSMTGDVYSFGILLLE 879 (973)
Q Consensus 802 HrDik~~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlG~ll~e 879 (973)
||||||+|||++.++.+||+|||+|+.... ......+|+.|+|||++.+ ..++.++|||||||++||
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~-----------~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~e 285 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGT-----------RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYR 285 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTC-----------EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHH
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCC-----------CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHH
Confidence 999999999999999999999999986532 1114457799999999987 689999999999999999
Q ss_pred HHhCCCCCCCCCCCCccHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 039720 880 MFTRRRPTDNMFNDGLTLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVK 957 (973)
Q Consensus 880 lltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 957 (973)
|++|+.||.......... +.... .......... ......++..+.+++.+||+.||++|||++|+++
T Consensus 286 lltg~~Pf~~~~~~~~~~--~~~~~----~~~~~~~~~~-----~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 286 VWCLFLPFGLVTPGIKGS--WKRPS----LRVPGTDSLA-----FGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp HHHSSCSTTBCCTTCTTC--CCBCC----TTSCCCCSCC-----CTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred HHhCCCCCCCcCcccccc--hhhhh----hhhccccccc-----hhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 999999998664331110 00000 0000000000 0111234556778999999999999999999975
No 231
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=3.6e-37 Score=335.32 Aligned_cols=245 Identities=20% Similarity=0.260 Sum_probs=197.7
Q ss_pred HhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhc-CCCCceeEEeEeeecccCCC
Q 039720 672 ATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK--KGATKSFVAECEALRNI-RHRNLIKIITICSSIDFKGA 748 (973)
Q Consensus 672 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~ 748 (973)
..++|++.+.||+|+||+||+|++..+++.||+|+++... ......+.+|+..+..+ +||||+++++++.. .
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~-----~ 83 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAE-----D 83 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEE-----T
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeec-----C
Confidence 3568999999999999999999999999999999997542 33456788999999999 89999999998765 3
Q ss_pred ceEEEEEeeccCCCHHHHhhhc----CCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCC---------
Q 039720 749 DFKAIVYEYMQYGSVDDWLHHT----NDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHD--------- 815 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~--------- 815 (973)
+..++||||+++++|.+++... ...++..++.++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 84 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~ 160 (289)
T 1x8b_A 84 DHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEE 160 (289)
T ss_dssp TEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----------
T ss_pred CeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccc
Confidence 7899999999999999999764 5567888999999999999999999 99999999999999844
Q ss_pred ----------CcEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCC-CCCcccchHHHHHHHHHHHhCC
Q 039720 816 ----------MVAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGG-DLSMTGDVYSFGILLLEMFTRR 884 (973)
Q Consensus 816 ----------~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~ll~elltg~ 884 (973)
..+||+|||.+...... ....||+.|+|||++.+. .++.++|||||||++|+|++|.
T Consensus 161 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~------------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~ 228 (289)
T 1x8b_A 161 GDEDDWASNKVMFKIGDLGHVTRISSP------------QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAE 228 (289)
T ss_dssp ---------CCCEEECCCTTCEETTCS------------CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCC
T ss_pred cccccccCCceEEEEcccccccccCCc------------cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCC
Confidence 47999999999865432 123489999999998776 5678999999999999999998
Q ss_pred CCCCCCCCCCccHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 885 RPTDNMFNDGLTLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 885 ~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
.|+... ........... +..+..++..+.+++.+||+.||++|||++|+++.
T Consensus 229 ~~~~~~----~~~~~~~~~~~------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 229 PLPRNG----DQWHEIRQGRL------------------PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp CCCSSS----HHHHHHHTTCC------------------CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred CCCcch----hHHHHHHcCCC------------------CCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 876432 11111111000 11112234567789999999999999999999864
No 232
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-37 Score=347.09 Aligned_cols=256 Identities=21% Similarity=0.282 Sum_probs=202.7
Q ss_pred hhcCCcCCccccccceeEEEEEEC---CCCcEEEEEEeeccc----chhHHHHHHHHHHHHhc-CCCCceeEEeEeeecc
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLG---EDGMSVAVKVMNLDK----KGATKSFVAECEALRNI-RHRNLIKIITICSSID 744 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 744 (973)
.++|++.+.||+|+||+||+|++. .+++.||||+++... ....+.+.+|+++++.+ +||||+++++++..
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-- 130 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT-- 130 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE--
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEee--
Confidence 368999999999999999999984 589999999986432 23345677899999999 69999999998654
Q ss_pred cCCCceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccc
Q 039720 745 FKGADFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 824 (973)
Q Consensus 745 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg 824 (973)
....++||||+++|+|.+++.....+.+..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus 131 ---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG 204 (355)
T 1vzo_A 131 ---ETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFG 204 (355)
T ss_dssp ---TTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSS
T ss_pred ---CceEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCC
Confidence 378999999999999999999888888889999999999999999999 99999999999999999999999999
Q ss_pred cchhccCCCCccCCCCCcccccccccccccCcccccC--CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhh
Q 039720 825 LARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMG--GDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAK 902 (973)
Q Consensus 825 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~ 902 (973)
+++...... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||......... .....
T Consensus 205 ~a~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~-~~~~~ 276 (355)
T 1vzo_A 205 LSKEFVADE-------TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQ-AEISR 276 (355)
T ss_dssp EEEECCGGG-------GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCH-HHHHH
T ss_pred CCeecccCC-------CCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchH-HHHHH
Confidence 998653211 222334579999999999886 35789999999999999999999999754333221 11111
Q ss_pred HhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHHHH
Q 039720 903 MALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERM-----QMTAVVKKL 959 (973)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L 959 (973)
..... .+..+......+.+++.+||+.||++|| +++|+++..
T Consensus 277 ~~~~~---------------~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 277 RILKS---------------EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp HHHHC---------------CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred HHhcc---------------CCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 11000 0111123345667899999999999999 999998764
No 233
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1e-36 Score=344.06 Aligned_cols=268 Identities=19% Similarity=0.208 Sum_probs=196.9
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCceeEEeEeeecc-cCCCc
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK--KGATKSFVAECEALRNIRHRNLIKIITICSSID-FKGAD 749 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~~~ 749 (973)
.++|++.+.||+|+||+||+|.+..+++.||||++.... ....+.+.+|+.+++.++||||+++++++.... .....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 368999999999999999999999999999999997532 334567889999999999999999999876432 23345
Q ss_pred eEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhc
Q 039720 750 FKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 829 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~ 829 (973)
..++||||+++ +|.+.+.. ...+..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 177 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 177 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC----
T ss_pred ceEEEEEcCCC-CHHHHHhh--ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeeccccc
Confidence 78999999975 78887753 466778899999999999999999 9999999999999999999999999999865
Q ss_pred cCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhc--Cc
Q 039720 830 SHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMAL--PK 907 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~--~~ 907 (973)
... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||...... ..+..... ..
T Consensus 178 ~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~----~~~~~i~~~~~~ 244 (371)
T 2xrw_A 178 GTS---------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI----DQWNKVIEQLGT 244 (371)
T ss_dssp ---------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHC-CCC
T ss_pred ccc---------cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHhCC
Confidence 431 1223457899999999999999999999999999999999999999764321 11111100 00
Q ss_pred ---ccccccCc----------cc--------ccc---cCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 039720 908 ---KVMGIVDP----------SL--------LME---ARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKL 959 (973)
Q Consensus 908 ---~~~~~~~~----------~~--------~~~---~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 959 (973)
.......+ .. ... .............+.+++.+||+.||++|||++|+++.-
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 320 (371)
T 2xrw_A 245 PCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 320 (371)
T ss_dssp CCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred CCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCc
Confidence 00000000 00 000 000112234467788999999999999999999998853
No 234
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=2.1e-37 Score=343.77 Aligned_cols=258 Identities=23% Similarity=0.362 Sum_probs=200.0
Q ss_pred hhcCCcCCccccccceeEEEEE-----ECCCCcEEEEEEeecc-cchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccC
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGN-----LGEDGMSVAVKVMNLD-KKGATKSFVAECEALRNIRHRNLIKIITICSSIDFK 746 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~-----~~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 746 (973)
.++|++.+.||+|+||+||+|+ ...++..||||++... .......+.+|+.++++++||||+++++++..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---- 104 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ---- 104 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcC----
Confidence 4689999999999999999999 4567889999999643 23445678999999999999999999998654
Q ss_pred CCceEEEEEeeccCCCHHHHhhhcC-------CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecC---CC
Q 039720 747 GADFKAIVYEYMQYGSVDDWLHHTN-------DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDH---DM 816 (973)
Q Consensus 747 ~~~~~~lv~e~~~~gsL~~~l~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~---~~ 816 (973)
....++||||+++|+|.+++.... ......++.++.|++.||.|||+. +|+||||||+||+++. +.
T Consensus 105 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~ 180 (327)
T 2yfx_A 105 -SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGR 180 (327)
T ss_dssp -SSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTC
T ss_pred -CCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcc
Confidence 467899999999999999998653 255677899999999999999999 9999999999999984 44
Q ss_pred cEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCc
Q 039720 817 VAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFNDGL 895 (973)
Q Consensus 817 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~~~~ 895 (973)
.+||+|||+++...... .........||+.|+|||++.+..++.++||||||+++|+|++ |+.||......
T Consensus 181 ~~kl~Dfg~~~~~~~~~------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-- 252 (327)
T 2yfx_A 181 VAKIGDFGMARDIYRAS------YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-- 252 (327)
T ss_dssp CEEECCCHHHHHHHC------------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--
T ss_pred eEEECcccccccccccc------ccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH--
Confidence 69999999998654322 1122234567889999999988999999999999999999998 99999754221
Q ss_pred cHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhcc
Q 039720 896 TLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVG 963 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 963 (973)
.+....... . ....+..++..+.+++.+||+.||++||+++|+++.|+.+.
T Consensus 253 ~~~~~~~~~---~--------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~ 303 (327)
T 2yfx_A 253 EVLEFVTSG---G--------------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 303 (327)
T ss_dssp HHHHHHHTT---C--------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHhcC---C--------------CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence 111111000 0 01111233456788999999999999999999999999875
No 235
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=5.9e-37 Score=360.50 Aligned_cols=252 Identities=21% Similarity=0.306 Sum_probs=202.2
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccc-------------hhHHHHHHHHHHHHhcCCCCceeEEeE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKK-------------GATKSFVAECEALRNIRHRNLIKIITI 739 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~e~~~l~~l~h~niv~~~~~ 739 (973)
.++|.+.++||+|+||+||+|++..+++.||||++..... ...+.+.+|+.+++.++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 4689999999999999999999999999999999975421 234678999999999999999999999
Q ss_pred eeecccCCCceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCC---
Q 039720 740 CSSIDFKGADFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDM--- 816 (973)
Q Consensus 740 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~--- 816 (973)
+.. ....++||||+++|+|.+++......++..++.++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 115 ~~~-----~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~ 186 (504)
T 3q5i_A 115 FED-----KKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLL 186 (504)
T ss_dssp EEC-----SSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCS
T ss_pred EEc-----CCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCc
Confidence 654 478999999999999999998888888999999999999999999999 999999999999998776
Q ss_pred cEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCcc
Q 039720 817 VAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLT 896 (973)
Q Consensus 817 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~ 896 (973)
.+||+|||+|+..... .......||+.|+|||++. ..|+.++||||+||++|+|++|+.||...... .
T Consensus 187 ~~kl~Dfg~a~~~~~~---------~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~ 254 (504)
T 3q5i_A 187 NIKIVDFGLSSFFSKD---------YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ--D 254 (504)
T ss_dssp SEEECCCTTCEECCTT---------SCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--H
T ss_pred cEEEEECCCCEEcCCC---------CccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH--H
Confidence 6999999999866432 2223456999999999976 56899999999999999999999999764321 1
Q ss_pred HhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 897 LHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
+....... .. ..+ .......+..+.+++.+||+.||.+|||++|+++.
T Consensus 255 ~~~~i~~~--~~---~~~---------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 255 IIKKVEKG--KY---YFD---------FNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp HHHHHHHC--CC---CCC---------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHHcC--CC---CCC---------ccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 11111000 00 000 01112234567889999999999999999999864
No 236
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.1e-36 Score=346.60 Aligned_cols=236 Identities=16% Similarity=0.152 Sum_probs=126.0
Q ss_pred CCCCCCCCCCCCc-eeeeEeeCCCCeEEEEEeeccCccccccCCCcCCCCCCEEEccCCCCCCCCCcc-ccccCCCCEEe
Q 039720 39 VTKSWNNSINLCQ-WTGVTCGHRHQRVTKLDLESQNIGGFLSPYIGNLSFLRVINLANNSFHGQIPKE-VGRLFRLETIV 116 (973)
Q Consensus 39 ~l~sw~~~~~~c~-w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~ 116 (973)
.+++|..+.+||. |.++.|.....++ ............-..+++++.|++++|.++ .+|.. +.++++|++|+
T Consensus 2 ~~~~~~~~~~C~~~~~~~~c~~~~~~i-----~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~ 75 (390)
T 3o6n_A 2 NVKPRQPEYKCIDSNLQYDCVFYDVHI-----DMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLN 75 (390)
T ss_dssp -----CCEECBCC------EEEESCEE-----CSSCCCCEESCSSGGGCCCSEEEEESCEES-EECTHHHHHCCCCSEEE
T ss_pred CcCCCCCccceehhhhhhccceeeeee-----ecccccccccccccccCCceEEEecCCchh-hCChhHhcccccCcEEE
Confidence 3678998888885 6655554322222 222222222333345788899999999887 45544 67888999999
Q ss_pred eecccCCCCCCcccccCCCccceEecccccccchhhhhccccccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCC
Q 039720 117 LSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDG 196 (973)
Q Consensus 117 Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 196 (973)
|++|.+++..|..|+.+++|++|++++|.+.+..|..++++++|++|+|++|+++...+..|+++++|++|++++|++++
T Consensus 76 L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~ 155 (390)
T 3o6n_A 76 LNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLER 155 (390)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCB
T ss_pred CCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCc
Confidence 99888886555666666666555555555555555555555555555555555553222224555555555555555554
Q ss_pred CCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccCCccccCCCcccccCCCCCcEEEccCCcccccCCcccc
Q 039720 197 RIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLS 276 (973)
Q Consensus 197 ~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 276 (973)
..|..|.++++|++|++++|++++. .+. .+++|+.|++++|.+++. .
T Consensus 156 ~~~~~~~~l~~L~~L~l~~n~l~~~---~~~-------------------------~l~~L~~L~l~~n~l~~~-----~ 202 (390)
T 3o6n_A 156 IEDDTFQATTSLQNLQLSSNRLTHV---DLS-------------------------LIPSLFHANVSYNLLSTL-----A 202 (390)
T ss_dssp CCTTTTSSCTTCCEEECCSSCCSBC---CGG-------------------------GCTTCSEEECCSSCCSEE-----E
T ss_pred cChhhccCCCCCCEEECCCCcCCcc---ccc-------------------------cccccceeeccccccccc-----C
Confidence 4444455555555555555555432 122 345555555555555432 2
Q ss_pred CCCCCCEEEccCCcccccCcccccCcccccceecccccCC
Q 039720 277 NASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNLG 316 (973)
Q Consensus 277 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 316 (973)
...+|++|++++|+++..... ..++|++|+|++|.++
T Consensus 203 ~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~n~l~ 239 (390)
T 3o6n_A 203 IPIAVEELDASHNSINVVRGP---VNVELTILKLQHNNLT 239 (390)
T ss_dssp CCSSCSEEECCSSCCCEEECC---CCSSCCEEECCSSCCC
T ss_pred CCCcceEEECCCCeeeecccc---ccccccEEECCCCCCc
Confidence 334566666666666544221 1245556666555554
No 237
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1e-36 Score=333.57 Aligned_cols=253 Identities=22% Similarity=0.318 Sum_probs=204.8
Q ss_pred HhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc---------chhHHHHHHHHHHHHhcC-CCCceeEEeEee
Q 039720 672 ATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK---------KGATKSFVAECEALRNIR-HRNLIKIITICS 741 (973)
Q Consensus 672 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~ 741 (973)
..++|++.+.||+|+||.||+|++..+|+.||||+++... ....+.+.+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 4578999999999999999999999999999999997543 122456889999999996 999999999865
Q ss_pred ecccCCCceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEe
Q 039720 742 SIDFKGADFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVS 821 (973)
Q Consensus 742 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~ 821 (973)
. ....++||||+++++|.+++......++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+
T Consensus 95 ~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~ 166 (298)
T 1phk_A 95 T-----NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLT 166 (298)
T ss_dssp C-----SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEEC
T ss_pred c-----CCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEe
Confidence 4 478999999999999999999887888889999999999999999999 99999999999999999999999
Q ss_pred ccccchhccCCCCccCCCCCcccccccccccccCccccc------CCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCc
Q 039720 822 DFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGM------GGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGL 895 (973)
Q Consensus 822 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~ 895 (973)
|||.+...... .......||+.|+|||++. ...++.++||||||+++|+|++|+.||......
T Consensus 167 dfg~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-- 235 (298)
T 1phk_A 167 DFGFSCQLDPG---------EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM-- 235 (298)
T ss_dssp CCTTCEECCTT---------CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--
T ss_pred cccchhhcCCC---------cccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH--
Confidence 99999865432 1223456899999999874 457899999999999999999999999754221
Q ss_pred cHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 039720 896 TLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVK 957 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 957 (973)
......... . . .. ........+..+.+++.+||+.||++||+++|+++
T Consensus 236 ~~~~~~~~~---~----~--~~-----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 236 LMLRMIMSG---N----Y--QF-----GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HHHHHHHHT---C----C--CC-----CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHHHhcC---C----c--cc-----CcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 111110000 0 0 00 01111234566789999999999999999999986
No 238
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.6e-37 Score=340.57 Aligned_cols=253 Identities=22% Similarity=0.298 Sum_probs=199.1
Q ss_pred HhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceE
Q 039720 672 ATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFK 751 (973)
Q Consensus 672 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 751 (973)
..++|++.+.||+|+||+||+|++..+++.||+|++........+.+.+|+++++.++||||+++++++.. ....
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 91 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYH-----DGKL 91 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----C-CE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeee-----CCeE
Confidence 34689999999999999999999999999999999986666667889999999999999999999998754 3688
Q ss_pred EEEEeeccCCCHHHHhhh-cCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhcc
Q 039720 752 AIVYEYMQYGSVDDWLHH-TNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLS 830 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~ 830 (973)
++||||+++++|.+++.. ....++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 92 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (302)
T 2j7t_A 92 WIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNL 168 (302)
T ss_dssp EEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHH
T ss_pred EEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccc
Confidence 999999999999998875 44577888999999999999999999 99999999999999999999999999986432
Q ss_pred CCCCccCCCCCcccccccccccccCcccc-----cCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhc
Q 039720 831 HHPFLVAPEGQSSSIEMKGTIGYIGPEYG-----MGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMAL 905 (973)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~ 905 (973)
.. ........||+.|+|||++ .+..++.++||||||+++|+|++|+.||........ .......
T Consensus 169 ~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~-- 237 (302)
T 2j7t_A 169 KT--------LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV-LLKIAKS-- 237 (302)
T ss_dssp HH--------HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHS--
T ss_pred cc--------ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHH-HHHHhcc--
Confidence 11 1112234689999999987 467789999999999999999999999975432110 1111000
Q ss_pred CcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 039720 906 PKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVK 957 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 957 (973)
. .+. ...+..++..+.+++.+||+.||++|||++|+++
T Consensus 238 -~------~~~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 238 -D------PPT-------LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp -C------CCC-------CSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred -C------Ccc-------cCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0 000 0112233456788999999999999999999976
No 239
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.8e-37 Score=369.84 Aligned_cols=255 Identities=21% Similarity=0.336 Sum_probs=200.0
Q ss_pred CCcCC-ccccccceeEEEEEEC--CCCcEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceE
Q 039720 676 FSSSN-RIGKGSFGFVYKGNLG--EDGMSVAVKVMNLDK-KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFK 751 (973)
Q Consensus 676 y~~~~-~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 751 (973)
+.+.+ .||+|+||+||+|.+. .++..||||+++... ....+.+.+|++++++++||||++++++|.. +..
T Consensus 337 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~------~~~ 410 (613)
T 2ozo_A 337 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------EAL 410 (613)
T ss_dssp EEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES------SSE
T ss_pred eeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc------CCe
Confidence 33444 7999999999999875 356779999997543 3356789999999999999999999999753 458
Q ss_pred EEEEeeccCCCHHHHhhhcC-CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhcc
Q 039720 752 AIVYEYMQYGSVDDWLHHTN-DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLS 830 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~ 830 (973)
++||||+.+|+|.+++.... .+.+..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 411 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~ 487 (613)
T 2ozo_A 411 MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALG 487 (613)
T ss_dssp EEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC
T ss_pred EEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCccccc
Confidence 99999999999999987543 467788999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCccHhhhhhHhcCccc
Q 039720 831 HHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHGYAKMALPKKV 909 (973)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
.... .........+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+ +.......
T Consensus 488 ~~~~-----~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--~~~~i~~~----- 555 (613)
T 2ozo_A 488 ADDS-----YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--VMAFIEQG----- 555 (613)
T ss_dssp -------------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH--HHHHHHTT-----
T ss_pred CCCc-----eeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HHHHHHcC-----
Confidence 3210 0111122345688999999999999999999999999999998 999998654321 11111100
Q ss_pred ccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhcc
Q 039720 910 MGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVG 963 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 963 (973)
.....+..++..+.++|.+||+.||++||++++|++.|+++-
T Consensus 556 ------------~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 597 (613)
T 2ozo_A 556 ------------KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 597 (613)
T ss_dssp ------------CCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHH
T ss_pred ------------CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 001122345567889999999999999999999999999864
No 240
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=5e-37 Score=345.91 Aligned_cols=275 Identities=20% Similarity=0.250 Sum_probs=207.4
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK-KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFK 751 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 751 (973)
.++|++.+.||+|+||+||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++...........
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 468999999999999999999999999999999997433 3345778999999999999999999999876555556789
Q ss_pred EEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhccC
Q 039720 752 AIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLSH 831 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~~ 831 (973)
++||||+. |+|.+++... ..++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 106 ~iv~e~~~-~~L~~~l~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 180 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 180 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred EEEEcccC-cCHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEecCC
Confidence 99999998 5899988764 577788999999999999999999 999999999999999999999999999986543
Q ss_pred CCCccCCCCCcccccccccccccCcccccC-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCcc--
Q 039720 832 HPFLVAPEGQSSSIEMKGTIGYIGPEYGMG-GDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKK-- 908 (973)
Q Consensus 832 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~-- 908 (973)
.. ..........||+.|+|||++.+ ..++.++||||+||++|+|++|+.||......+. +...........
T Consensus 181 ~~-----~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~i~~~~~~~~~~ 254 (364)
T 3qyz_A 181 DH-----DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ-LNHILGILGSPSQE 254 (364)
T ss_dssp GG-----CBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGH-HHHHHHHHCSCCHH
T ss_pred CC-----CccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHH-HHHHHHHhCCCCHH
Confidence 21 11112234579999999998654 4589999999999999999999999976543221 111111100000
Q ss_pred -cccccCcc-------cccccCC--CchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 909 -VMGIVDPS-------LLMEARG--PSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 909 -~~~~~~~~-------~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
.....+.. ....... ..........+.+++.+||+.||++|||++|+++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000 0000000 00112234567899999999999999999999874
No 241
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1e-36 Score=336.24 Aligned_cols=252 Identities=24% Similarity=0.317 Sum_probs=199.5
Q ss_pred HhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceE
Q 039720 672 ATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFK 751 (973)
Q Consensus 672 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 751 (973)
..++|++.+.||+|+||.||+|++..+|+.||+|++.... ..+.+.+|+.+++.++||||+++++++.. ....
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 99 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFK-----NTDL 99 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEE-----TTEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEe-----CCEE
Confidence 4568999999999999999999999999999999997543 35678899999999999999999998765 3788
Q ss_pred EEEEeeccCCCHHHHhhh-cCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhcc
Q 039720 752 AIVYEYMQYGSVDDWLHH-TNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLS 830 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~ 830 (973)
++||||+++++|.+++.. .....+..++.++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||.+....
T Consensus 100 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 176 (314)
T 3com_A 100 WIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLT 176 (314)
T ss_dssp EEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECB
T ss_pred EEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhh
Confidence 999999999999999873 45677888999999999999999999 99999999999999999999999999997654
Q ss_pred CCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCcccc
Q 039720 831 HHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKVM 910 (973)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
.. ........||+.|+|||++.+..++.++||||||+++|+|++|+.||...... ........
T Consensus 177 ~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~----- 239 (314)
T 3com_A 177 DT--------MAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM----RAIFMIPT----- 239 (314)
T ss_dssp TT--------BSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHHHHHH-----
T ss_pred hh--------ccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHhc-----
Confidence 32 11223456899999999999999999999999999999999999999754221 11000000
Q ss_pred cccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 911 GIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
...+. ...+..++..+.+++.+||+.||++||+++|+++.
T Consensus 240 -~~~~~-------~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 240 -NPPPT-------FRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp -SCCCC-------CSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred -CCCcc-------cCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 00000 01112234567889999999999999999999863
No 242
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.6e-37 Score=366.93 Aligned_cols=257 Identities=26% Similarity=0.412 Sum_probs=206.9
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceEE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFKA 752 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 752 (973)
.++|++.++||+|+||+||+|++. .+..||||+++.... ..+.+.+|+++|++++||||+++++++.. ...+
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~------~~~~ 337 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPIY 337 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS------SSCE
T ss_pred hhhhhhheecccCCCeEEEEEEEC-CCceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee------ccce
Confidence 467899999999999999999996 457899999975442 45679999999999999999999998643 5689
Q ss_pred EEEeeccCCCHHHHhhhc--CCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhcc
Q 039720 753 IVYEYMQYGSVDDWLHHT--NDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLS 830 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~ 830 (973)
+||||+.+|+|.+++... ......+++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 338 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 414 (535)
T 2h8h_A 338 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 414 (535)
T ss_dssp EEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCC
T ss_pred EeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecC
Confidence 999999999999999753 3467788999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCccHhhhhhHhcCccc
Q 039720 831 HHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHGYAKMALPKKV 909 (973)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
... ........++..|+|||++.+..++.++|||||||++|||++ |+.||......+ +.......
T Consensus 415 ~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~--~~~~i~~~----- 480 (535)
T 2h8h_A 415 DNE-------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VLDQVERG----- 480 (535)
T ss_dssp CHH-------HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH--HHHHHHTT-----
T ss_pred CCc-------eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcC-----
Confidence 211 011122346778999999999999999999999999999999 999997643221 11110000
Q ss_pred ccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccccc
Q 039720 910 MGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEIF 966 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 966 (973)
. ....+..++..+.++|.+||+.||++||++++|++.|+++-...
T Consensus 481 -------~-----~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 481 -------Y-----RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp -------C-----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred -------C-----CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 0 01112234567789999999999999999999999999886543
No 243
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=6.8e-37 Score=351.66 Aligned_cols=198 Identities=22% Similarity=0.293 Sum_probs=170.9
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhc------CCCCceeEEeEeeecccC
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNI------RHRNLIKIITICSSIDFK 746 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~~~~~~~~~~~~ 746 (973)
..+|++.+.||+|+||+||+|++..+++.||||+++... .....+.+|+.+++.+ .|+||+++++++..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~---- 170 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF---- 170 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE----
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc----
Confidence 357999999999999999999999999999999997542 3445677888888877 57799999998765
Q ss_pred CCceEEEEEeeccCCCHHHHhhhcC--CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCc--EEEec
Q 039720 747 GADFKAIVYEYMQYGSVDDWLHHTN--DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMV--AHVSD 822 (973)
Q Consensus 747 ~~~~~~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~--~kl~D 822 (973)
....++||||+. ++|.+++.... .+.+..++.++.||+.||+|||+. +|+||||||+|||++.++. +||+|
T Consensus 171 -~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~D 245 (429)
T 3kvw_A 171 -RNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVID 245 (429)
T ss_dssp -TTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECC
T ss_pred -CCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEee
Confidence 378999999996 68999987654 367788999999999999999999 9999999999999999987 99999
Q ss_pred cccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCC
Q 039720 823 FGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMF 891 (973)
Q Consensus 823 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~ 891 (973)
||+|+.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 246 FG~a~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 246 FGSSCYEHQ-----------RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp CTTCEETTC-----------CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cccceecCC-----------cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 999975432 1224578999999999999999999999999999999999999997653
No 244
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=4.4e-37 Score=335.08 Aligned_cols=251 Identities=20% Similarity=0.268 Sum_probs=185.7
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccc--hhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCce
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKK--GATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADF 750 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 750 (973)
.++|++.+.||+|+||+||+|++..+|+.||+|+++.... .....+.++...++.++||||+++++++.. ...
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~-----~~~ 80 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR-----EGD 80 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----SSS
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeec-----cCC
Confidence 4689999999999999999999999999999999975432 223334555556788899999999998754 478
Q ss_pred EEEEEeeccCCCHHHHhhh----cCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccc
Q 039720 751 KAIVYEYMQYGSVDDWLHH----TNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 826 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a 826 (973)
.++||||++ |+|.+++.. ....++..++.++.|++.|++|||+++ +|+||||||+||+++.++.+||+|||++
T Consensus 81 ~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 157 (290)
T 3fme_A 81 VWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGIS 157 (290)
T ss_dssp EEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC---
T ss_pred EEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCc
Confidence 999999998 488777653 456778889999999999999999853 8999999999999999999999999999
Q ss_pred hhccCCCCccCCCCCcccccccccccccCcccc----cCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhh
Q 039720 827 RFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYG----MGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAK 902 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~ 902 (973)
+..... .......||+.|+|||++ .+..++.++||||+||++|+|++|+.||.........+.....
T Consensus 158 ~~~~~~---------~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 228 (290)
T 3fme_A 158 GYLVDD---------VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE 228 (290)
T ss_dssp ---------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHH
T ss_pred cccccc---------ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhc
Confidence 865432 122234689999999995 5667899999999999999999999999754332222111111
Q ss_pred HhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 039720 903 MALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVK 957 (973)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 957 (973)
... + .......+..+.+++.+||+.||++|||++|+++
T Consensus 229 ~~~---------~--------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 229 EPS---------P--------QLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp SCC---------C--------CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred cCC---------C--------CcccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 100 0 0011123456788999999999999999999987
No 245
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=9.3e-37 Score=348.44 Aligned_cols=270 Identities=18% Similarity=0.234 Sum_probs=203.7
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcC--------CCCceeEEeEeeecc
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIR--------HRNLIKIITICSSID 744 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~~~~~~~~~~ 744 (973)
.++|++.+.||+|+||+||+|++..+++.||||+++.. ....+.+.+|+.+++.++ ||||+++++++...
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~- 113 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS- 113 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE-
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec-
Confidence 36899999999999999999999999999999999743 334567889999999885 78899999987642
Q ss_pred cCCCceEEEEEeeccCCCHHHHhhhc--CCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCC------
Q 039720 745 FKGADFKAIVYEYMQYGSVDDWLHHT--NDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDM------ 816 (973)
Q Consensus 745 ~~~~~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~------ 816 (973)
.......++||||+ ++++.+.+... ..+++..++.++.||+.||+|||+++ +|+||||||+|||++.++
T Consensus 114 ~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 114 GVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp ETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHH
T ss_pred CCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhh
Confidence 22456899999999 56666666543 35677889999999999999999864 899999999999999775
Q ss_pred -------------------------------------------cEEEeccccchhccCCCCccCCCCCcccccccccccc
Q 039720 817 -------------------------------------------VAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGY 853 (973)
Q Consensus 817 -------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y 853 (973)
.+||+|||.++.... ......||+.|
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~-----------~~~~~~gt~~y 259 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK-----------HFTEDIQTRQY 259 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTB-----------CSCSCCSCGGG
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccc-----------cCccCCCCCcc
Confidence 799999999986532 12234689999
Q ss_pred cCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccH-----hhhhhHh--cCcc-------cccccCcc--c
Q 039720 854 IGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTL-----HGYAKMA--LPKK-------VMGIVDPS--L 917 (973)
Q Consensus 854 ~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~-----~~~~~~~--~~~~-------~~~~~~~~--~ 917 (973)
+|||++.+..++.++|||||||++|||++|+.||.......... ....... .+.. ........ .
T Consensus 260 ~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 339 (397)
T 1wak_A 260 RSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDL 339 (397)
T ss_dssp CCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSB
T ss_pred cCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccc
Confidence 99999999999999999999999999999999998655432211 1110000 0000 00000000 0
Q ss_pred --cccc----------CCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 918 --LMEA----------RGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 918 --~~~~----------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
.... ............+.+++.+||+.||++|||++|++++
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 340 KHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp SSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred ccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 0000 0012235667789999999999999999999999863
No 246
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=3.8e-37 Score=347.12 Aligned_cols=251 Identities=16% Similarity=0.140 Sum_probs=198.1
Q ss_pred HhhcCCcCCccccccceeEEEE-----EECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcC---CCCceeEEeEeeec
Q 039720 672 ATKEFSSSNRIGKGSFGFVYKG-----NLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIR---HRNLIKIITICSSI 743 (973)
Q Consensus 672 ~~~~y~~~~~lg~G~~g~V~~~-----~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~ 743 (973)
..++|.+.+.||+|+||+||+| .+..+++.||||+++.. ...++..|+++++.++ |+|++++++++..
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~- 138 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF- 138 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC-
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec-
Confidence 3468999999999999999999 46678999999999644 3456778888888887 9999999998654
Q ss_pred ccCCCceEEEEEeeccCCCHHHHhhh-----cCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecC----
Q 039720 744 DFKGADFKAIVYEYMQYGSVDDWLHH-----TNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDH---- 814 (973)
Q Consensus 744 ~~~~~~~~~lv~e~~~~gsL~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~---- 814 (973)
.+..++||||+++|+|.+++.. ...+++..++.++.||+.||+|||+. +|+||||||+|||++.
T Consensus 139 ----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~ 211 (365)
T 3e7e_A 139 ----QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLE 211 (365)
T ss_dssp ----SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTC
T ss_pred ----CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccC
Confidence 3788999999999999999974 44567788999999999999999999 9999999999999998
Q ss_pred -------CCcEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCC
Q 039720 815 -------DMVAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPT 887 (973)
Q Consensus 815 -------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf 887 (973)
++.+||+|||+|+.+.... .........||+.|+|||++.+..|+.++|||||||++|||++|+.||
T Consensus 212 ~~~~~~~~~~~kl~DFG~a~~~~~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf 285 (365)
T 3e7e_A 212 QDDEDDLSAGLALIDLGQSIDMKLFP------KGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMK 285 (365)
T ss_dssp C------CTTEEECCCTTCEEGGGSC------TTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccccccccCCEEEeeCchhhhhhccC------CCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCcc
Confidence 8999999999997653211 123334567999999999999999999999999999999999999998
Q ss_pred CCCCCCCccHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCC-CCHHHHHHHHHhcc
Q 039720 888 DNMFNDGLTLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSER-MQMTAVVKKLCAVG 963 (973)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-Ps~~evl~~L~~~~ 963 (973)
......... ....+ .... ....+.+++..|++.+|.+| |+++++.+.|+++-
T Consensus 286 ~~~~~~~~~----------------~~~~~----~~~~----~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l 338 (365)
T 3e7e_A 286 VKNEGGECK----------------PEGLF----RRLP----HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVF 338 (365)
T ss_dssp EEEETTEEE----------------ECSCC----TTCS----SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHH
T ss_pred ccCCCCcee----------------echhc----cccC----cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHH
Confidence 643322110 00000 0001 12345577779999999999 57888888887764
No 247
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.4e-36 Score=332.77 Aligned_cols=266 Identities=23% Similarity=0.364 Sum_probs=199.9
Q ss_pred hcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccc--hhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceE
Q 039720 674 KEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKK--GATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFK 751 (973)
Q Consensus 674 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 751 (973)
++|++.+.||+|+||+||+|++..+|+.||||+++.... ...+.+.+|+.++++++||||+++++++.. .+..
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 77 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT-----ENKL 77 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEE-----TTEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEec-----CCce
Confidence 579999999999999999999999999999999975432 234678899999999999999999999765 3789
Q ss_pred EEEEeeccCCCHHHHhhhc--CCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhc
Q 039720 752 AIVYEYMQYGSVDDWLHHT--NDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 829 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~ 829 (973)
++||||+. ++|.+++... ...+...++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+...
T Consensus 78 ~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 153 (299)
T 2r3i_A 78 YLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF 153 (299)
T ss_dssp EEEEECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHH
T ss_pred EEEEEccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhc
Confidence 99999998 6999998765 3456778899999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCccCCCCCcccccccccccccCcccccCCC-CCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhH-hcCc
Q 039720 830 SHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGD-LSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKM-ALPK 907 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~-~~~~ 907 (973)
... ........+|+.|+|||++.+.. ++.++|||||||++|+|++|+.||......+. +...... ..+.
T Consensus 154 ~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~ 224 (299)
T 2r3i_A 154 GVP--------VRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ-LFRIFRTLGTPD 224 (299)
T ss_dssp CCC--------SBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCC
T ss_pred cCC--------ccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHH-HHHHHHHhCCCc
Confidence 432 11223346899999999988765 79999999999999999999999976432211 1111111 1110
Q ss_pred c-----cccc--cCcccccccCC--CchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 039720 908 K-----VMGI--VDPSLLMEARG--PSKFEECLVAVVRTGVACSMESPSERMQMTAVVK 957 (973)
Q Consensus 908 ~-----~~~~--~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 957 (973)
. .... ..+.+...... ..........+.+++.+|++.||++|||++|+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 225 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp TTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0 0000 00000000000 0001123456778999999999999999999987
No 248
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.6e-37 Score=340.71 Aligned_cols=266 Identities=22% Similarity=0.314 Sum_probs=184.0
Q ss_pred HhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCce
Q 039720 672 ATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK-KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADF 750 (973)
Q Consensus 672 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 750 (973)
..++|++.+.||+|+||+||+|++..+++.||||++.... ....+.+.+|+.+++.++||||+++++++.. .+.
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~ 87 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVV-----KDE 87 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEES-----SSC
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEee-----cCC
Confidence 4578999999999999999999998899999999986543 3345678899999999999999999998654 367
Q ss_pred EEEEEeeccCCCHHHHhhh--------cCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEec
Q 039720 751 KAIVYEYMQYGSVDDWLHH--------TNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSD 822 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~--------~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~D 822 (973)
.++||||+++++|.+++.. ....++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 88 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~d 164 (303)
T 2vwi_A 88 LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIAD 164 (303)
T ss_dssp EEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECC
T ss_pred cEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEe
Confidence 9999999999999999874 34467788999999999999999999 999999999999999999999999
Q ss_pred cccchhccCCCCccCCCCCcccccccccccccCcccccC-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhh
Q 039720 823 FGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMG-GDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYA 901 (973)
Q Consensus 823 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~ 901 (973)
||.+......... ..........||+.|+|||++.+ ..++.++||||||+++|+|++|+.||............ .
T Consensus 165 fg~~~~~~~~~~~---~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~-~ 240 (303)
T 2vwi_A 165 FGVSAFLATGGDI---TRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT-L 240 (303)
T ss_dssp CHHHHHCC------------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHH-H
T ss_pred ccchheeccCCCc---cchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHH-h
Confidence 9999876432100 01112234568999999999876 56899999999999999999999999765332111100 0
Q ss_pred hHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 902 KMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
. ....... ...........++..+.+++.+||+.||++||+++|+++.
T Consensus 241 ~-~~~~~~~--------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 241 Q-NDPPSLE--------TGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp T-SSCCCTT--------C-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred c-cCCCccc--------cccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 0 0000000 0000011112233567789999999999999999999873
No 249
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.6e-36 Score=351.34 Aligned_cols=266 Identities=17% Similarity=0.246 Sum_probs=205.3
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceEE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFKA 752 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 752 (973)
.++|++.++||+|+||+||+|++..+++.||||++..... ...+..|+++++.+.|++.+..+.++.. ..+..+
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~----~~~~~~ 79 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGV----EGDYNV 79 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEE----ETTEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEe----eCCEEE
Confidence 4689999999999999999999999999999999875433 3357889999999987554444444322 247889
Q ss_pred EEEeeccCCCHHHHhhh-cCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe---cCCCcEEEeccccchh
Q 039720 753 IVYEYMQYGSVDDWLHH-TNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLL---DHDMVAHVSDFGLARF 828 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl---~~~~~~kl~Dfg~a~~ 828 (973)
+||||+ +++|.+++.. ...+.+..++.++.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||+++.
T Consensus 80 lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (483)
T 3sv0_A 80 LVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKK 155 (483)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred EEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCccee
Confidence 999999 9999999985 44677888999999999999999999 99999999999999 6889999999999987
Q ss_pred ccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCcc--HhhhhhHhcC
Q 039720 829 LSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLT--LHGYAKMALP 906 (973)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~--~~~~~~~~~~ 906 (973)
+....... ...........||+.|+|||++.+..++.++|||||||++|||++|+.||......... +.........
T Consensus 156 ~~~~~~~~-~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~ 234 (483)
T 3sv0_A 156 YRDTSTHQ-HIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVA 234 (483)
T ss_dssp CBCTTTCC-BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHH
T ss_pred ccCCcccc-ccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcccc
Confidence 65432100 00011223567999999999999999999999999999999999999999875443211 1111111000
Q ss_pred cccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhcc
Q 039720 907 KKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVG 963 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 963 (973)
... ......++.++.+++.+||+.||++||++++|++.|+++.
T Consensus 235 ~~~--------------~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~ 277 (483)
T 3sv0_A 235 TSI--------------EALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLF 277 (483)
T ss_dssp SCH--------------HHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred ccH--------------HHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 000 0011223467889999999999999999999999999873
No 250
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=2.6e-37 Score=347.53 Aligned_cols=268 Identities=19% Similarity=0.267 Sum_probs=186.3
Q ss_pred hcCCcCCccccccceeEEEEEECCCCcEEEEEEeecc--cchhHHHHHHHHHHHHhcCCCCceeEEeEeeec-ccCCCce
Q 039720 674 KEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLD--KKGATKSFVAECEALRNIRHRNLIKIITICSSI-DFKGADF 750 (973)
Q Consensus 674 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-~~~~~~~ 750 (973)
++|++.+.||+|+||.||+|++..+|+.||||++... .....+.+.+|+++++.++||||+++++++... .......
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 6899999999999999999999999999999999643 233456788999999999999999999987542 1223356
Q ss_pred EEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhcc
Q 039720 751 KAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLS 830 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~ 830 (973)
.++|+||+ +++|.+++.. ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 109 ~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~ 183 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTA 183 (367)
T ss_dssp CEEEEECC-CEECC------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC--------
T ss_pred EEEEeccc-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence 89999998 6899988875 4577888999999999999999999 99999999999999999999999999998643
Q ss_pred CCCCccCCCCCcccccccccccccCcccccC-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhc-C-c
Q 039720 831 HHPFLVAPEGQSSSIEMKGTIGYIGPEYGMG-GDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMAL-P-K 907 (973)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~-~-~ 907 (973)
. ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... ..+........ + .
T Consensus 184 ~-----------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~p~~ 251 (367)
T 2fst_X 184 D-----------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPGA 251 (367)
T ss_dssp ------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCSCCH
T ss_pred c-----------cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCH
Confidence 2 1234578999999999877 67899999999999999999999999764321 11111111100 0 0
Q ss_pred ccccccCcc----cc---cccCCC---chhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 908 KVMGIVDPS----LL---MEARGP---SKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 908 ~~~~~~~~~----~~---~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
.....+... .. ...... .........+.+++.+||+.||++|||++|+++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 252 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 000000000 00 000000 0111234567889999999999999999999875
No 251
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=6.6e-37 Score=344.97 Aligned_cols=278 Identities=20% Similarity=0.217 Sum_probs=201.2
Q ss_pred HHHHHHHhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccc-----------hhHHHHHHHHHHHHhcCCCCce
Q 039720 666 YAELSKATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKK-----------GATKSFVAECEALRNIRHRNLI 734 (973)
Q Consensus 666 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~e~~~l~~l~h~niv 734 (973)
.+++....++|++.+.||+|+||+||+|++. +|+.||||++..... ...+.+.+|+.+++.++||||+
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECT-TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECC-CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 4567778899999999999999999999986 599999999864321 1237789999999999999999
Q ss_pred eEEeEeeecccCCCceEEEEEeeccCCCHHHHhhhcC-CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEec
Q 039720 735 KIITICSSIDFKGADFKAIVYEYMQYGSVDDWLHHTN-DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLD 813 (973)
Q Consensus 735 ~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~ 813 (973)
++++++...........++||||+. |+|.+++.... ...+..+..++.|++.||.|||+. +|+||||||+||+++
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~ 168 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLA 168 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEC
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEc
Confidence 9999986654445568899999998 57887776543 567788999999999999999999 999999999999999
Q ss_pred CCCcEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccC-CCCCcccchHHHHHHHHHHHhCCCCCCCCCC
Q 039720 814 HDMVAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMG-GDLSMTGDVYSFGILLLEMFTRRRPTDNMFN 892 (973)
Q Consensus 814 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~ 892 (973)
.++.+||+|||+++.... ........||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.....
T Consensus 169 ~~~~~kl~Dfg~~~~~~~---------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~ 239 (362)
T 3pg1_A 169 DNNDITICDFNLAREDTA---------DANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTF 239 (362)
T ss_dssp TTCCEEECCTTC------------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred CCCCEEEEecCccccccc---------ccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCH
Confidence 999999999999975432 122334568999999999877 6789999999999999999999999976432
Q ss_pred CCccHhhhhhHhcCcc-----------cccccCcccccccCC--CchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 893 DGLTLHGYAKMALPKK-----------VMGIVDPSLLMEARG--PSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 893 ~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
.. .+........... ..+............ ..........+.+++.+||+.||++|||++|+++.
T Consensus 240 ~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 240 YN-QLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HH-HHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HH-HHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 11 1111111000000 000000000000000 01112234567899999999999999999999874
No 252
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=8.2e-37 Score=341.05 Aligned_cols=252 Identities=21% Similarity=0.292 Sum_probs=197.1
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccc-hhHHHHHHHHHH-HHhcCCCCceeEEeEeeecccCCCce
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKK-GATKSFVAECEA-LRNIRHRNLIKIITICSSIDFKGADF 750 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~~~~ 750 (973)
.++|++.+.||+|+||+||+|++..+|+.||||+++.... ....++..|..+ ++.++||||+++++++.. ...
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~-----~~~ 124 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR-----EGD 124 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEEC-----SSC
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEe-----CCc
Confidence 4689999999999999999999999999999999975432 234455566655 778899999999998754 368
Q ss_pred EEEEEeeccCCCHHHHhhh----cCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccc
Q 039720 751 KAIVYEYMQYGSVDDWLHH----TNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 826 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a 826 (973)
.++||||+.+ +|.+++.. .....+..++.++.||+.||+|||+++ +|+||||||+||+++.++.+||+|||++
T Consensus 125 ~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~ 201 (340)
T 3an0_A 125 VWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGIS 201 (340)
T ss_dssp EEEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHH
T ss_pred EEEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCc
Confidence 9999999985 89888763 456777889999999999999999742 8999999999999999999999999999
Q ss_pred hhccCCCCccCCCCCcccccccccccccCccccc----CCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhh
Q 039720 827 RFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGM----GGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAK 902 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~ 902 (973)
+.... ........||+.|+|||++. ...++.++|||||||++|||++|+.||.........+.....
T Consensus 202 ~~~~~---------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~ 272 (340)
T 3an0_A 202 GYLVD---------SVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE 272 (340)
T ss_dssp HHHSC---------HHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHH
T ss_pred eeccc---------ccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhc
Confidence 87642 11222346999999999964 347899999999999999999999999754322111111111
Q ss_pred HhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 903 MALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
.. .+. .....++..+.+++.+||+.||++||+++|+++.
T Consensus 273 ~~---------~~~--------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 273 EP---------SPQ--------LPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp SC---------CCC--------CCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CC---------CCC--------CCcccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 00 000 0112234567899999999999999999999873
No 253
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.2e-37 Score=342.28 Aligned_cols=259 Identities=24% Similarity=0.320 Sum_probs=198.1
Q ss_pred HHHhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhc-CCCCceeEEeEeeecccC-C
Q 039720 670 SKATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNI-RHRNLIKIITICSSIDFK-G 747 (973)
Q Consensus 670 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~-~ 747 (973)
....++|++.+.||+|+||+||+|++..+++.||||++..... ..+.+.+|+.+++++ +||||+++++++...... .
T Consensus 20 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~ 98 (326)
T 2x7f_A 20 RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 98 (326)
T ss_dssp CCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CC
T ss_pred cCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccc
Confidence 3456789999999999999999999999999999999975433 456788999999999 799999999998653211 1
Q ss_pred CceEEEEEeeccCCCHHHHhhhc--CCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEecccc
Q 039720 748 ADFKAIVYEYMQYGSVDDWLHHT--NDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 825 (973)
Q Consensus 748 ~~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~ 825 (973)
....++||||+++|+|.+++... ....+..++.++.||+.||.|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 175 (326)
T 2x7f_A 99 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGV 175 (326)
T ss_dssp CCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCTT
T ss_pred cceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEeeCcC
Confidence 46889999999999999999764 3566778899999999999999999 999999999999999999999999999
Q ss_pred chhccCCCCccCCCCCcccccccccccccCccccc-----CCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhh
Q 039720 826 ARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGM-----GGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGY 900 (973)
Q Consensus 826 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~ 900 (973)
+...... ........||+.|+|||++. +..++.++|||||||++|+|++|+.||....... ..
T Consensus 176 ~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~ 243 (326)
T 2x7f_A 176 SAQLDRT--------VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR----AL 243 (326)
T ss_dssp TC---------------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH----HH
T ss_pred ceecCcC--------ccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH----HH
Confidence 9765431 11223456899999999987 5678999999999999999999999997542211 11
Q ss_pred hhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 901 AKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
..... ...+.. ....++..+.+++.+||..||++||+++|+++.
T Consensus 244 ~~~~~------~~~~~~--------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 244 FLIPR------NPAPRL--------KSKKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp HHHHH------SCCCCC--------SCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHhhc------CccccC--------CccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00000 000000 011223467789999999999999999999873
No 254
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=5.4e-37 Score=343.72 Aligned_cols=264 Identities=20% Similarity=0.256 Sum_probs=201.9
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchh-----------------HHHHHHHHHHHHhcCCCCcee
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGA-----------------TKSFVAECEALRNIRHRNLIK 735 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~e~~~l~~l~h~niv~ 735 (973)
.++|++.+.||+|+||+||+|++ +++.||||++....... .+.+.+|+.+++.++||||++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~ 107 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT 107 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence 36899999999999999999999 89999999997442211 178999999999999999999
Q ss_pred EEeEeeecccCCCceEEEEEeeccCCCHHHH------hhh--cCCCchhhHHHHHHHHHHHHHHHHh-cCCCCeEecCCC
Q 039720 736 IITICSSIDFKGADFKAIVYEYMQYGSVDDW------LHH--TNDKLEVGKLNIVIEVASVIEYLHN-HCQPPIVHGDLK 806 (973)
Q Consensus 736 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~------l~~--~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivHrDik 806 (973)
+++++.. .+..++||||+++|+|.++ +.. ....++..++.++.|++.||+|||+ . +|+|||||
T Consensus 108 ~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~ 179 (348)
T 2pml_X 108 CEGIITN-----YDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVK 179 (348)
T ss_dssp CSEEEES-----SSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCC
T ss_pred EEEEEee-----CCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCC
Confidence 9998654 4789999999999999998 665 4566778899999999999999999 8 99999999
Q ss_pred CCcEEecCCCcEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCC-CCCc-ccchHHHHHHHHHHHhCC
Q 039720 807 PSNVLLDHDMVAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGG-DLSM-TGDVYSFGILLLEMFTRR 884 (973)
Q Consensus 807 ~~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~sDvwSlG~ll~elltg~ 884 (973)
|+||+++.++.+||+|||.+...... ......||+.|+|||++.+. .++. ++|||||||++|||++|+
T Consensus 180 p~Nil~~~~~~~kl~dfg~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~ 249 (348)
T 2pml_X 180 PSNILMDKNGRVKLSDFGESEYMVDK----------KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNV 249 (348)
T ss_dssp GGGEEECTTSCEEECCCTTCEECBTT----------EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSS
T ss_pred hHhEEEcCCCcEEEeccccccccccc----------cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCC
Confidence 99999999999999999999865321 22345689999999998887 6666 999999999999999999
Q ss_pred CCCCCCCCCCccHhhhhhHhcCcc--cccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 885 RPTDNMFNDGLTLHGYAKMALPKK--VMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 885 ~Pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
.||..................... ......+ .. ...........+..+.+++.+||+.||++||+++|+++.
T Consensus 250 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 250 VPFSLKISLVELFNNIRTKNIEYPLDRNHFLYP-LT-NKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp CSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTT-TC-C--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred CCCCCCCcHHHHHHHHhccCcCCccchhhhhcc-cc-ccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 999865442211111111100000 0000000 00 000001112345677899999999999999999999873
No 255
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.6e-36 Score=341.71 Aligned_cols=277 Identities=21% Similarity=0.276 Sum_probs=192.8
Q ss_pred HHHHHHhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeeccc-
Q 039720 667 AELSKATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDF- 745 (973)
Q Consensus 667 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~- 745 (973)
.+.....++|++.+.||+|+||+||+|++..+|+.||||++..+.. ....+.++++.++.++||||+++++++.....
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT-CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc-ccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 3445667899999999999999999999999999999999865432 33456778888999999999999999865322
Q ss_pred -CCCceEEEEEeeccCCCHHHHh----hhcCCCchhhHHHHHHHHHHHHHHHH--hcCCCCeEecCCCCCcEEecC-CCc
Q 039720 746 -KGADFKAIVYEYMQYGSVDDWL----HHTNDKLEVGKLNIVIEVASVIEYLH--NHCQPPIVHGDLKPSNVLLDH-DMV 817 (973)
Q Consensus 746 -~~~~~~~lv~e~~~~gsL~~~l----~~~~~~~~~~~~~i~~qi~~aL~~LH--~~~~~~ivHrDik~~NILl~~-~~~ 817 (973)
......++||||+.++ +.+.+ .......+..+..++.|++.|+.||| +. +|+||||||+||+++. ++.
T Consensus 95 ~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~ 170 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPDT-LHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGT 170 (360)
T ss_dssp CTTCEEEEEEEECCSCB-HHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTE
T ss_pred cccceeEEEEeeccccc-HHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCc
Confidence 2233478999999864 44333 34556667788999999999999999 77 9999999999999997 899
Q ss_pred EEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCcc
Q 039720 818 AHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGG-DLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLT 896 (973)
Q Consensus 818 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~ 896 (973)
+||+|||+++..... .......||+.|+|||++.+. .++.++|||||||++|+|++|+.||....... .
T Consensus 171 ~kl~Dfg~a~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~-~ 240 (360)
T 3e3p_A 171 LKLCDFGSAKKLSPS---------EPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAG-Q 240 (360)
T ss_dssp EEECCCTTCBCCCTT---------SCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-H
T ss_pred EEEeeCCCceecCCC---------CCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHH-H
Confidence 999999999866432 122345689999999998665 48999999999999999999999998643221 1
Q ss_pred HhhhhhHhc-C-cccccccCc-----ccccccC------CCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 897 LHGYAKMAL-P-KKVMGIVDP-----SLLMEAR------GPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 897 ~~~~~~~~~-~-~~~~~~~~~-----~~~~~~~------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
+........ + .......++ ....... ...........+.+++.+||+.||++|||++|++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 241 LHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 111111110 0 000000000 0000000 011111245678899999999999999999999875
No 256
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=3.4e-36 Score=330.64 Aligned_cols=254 Identities=21% Similarity=0.297 Sum_probs=198.2
Q ss_pred HhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc----chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCC
Q 039720 672 ATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK----KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKG 747 (973)
Q Consensus 672 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 747 (973)
..++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+++++.++||||+++++++.. .+
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~ 79 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYN---EE 79 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEC---C-
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEc---CC
Confidence 3478999999999999999999999999999999997542 2345778999999999999999999998742 23
Q ss_pred CceEEEEEeeccCCCHHHHhhh--cCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEecccc
Q 039720 748 ADFKAIVYEYMQYGSVDDWLHH--TNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 825 (973)
Q Consensus 748 ~~~~~lv~e~~~~gsL~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~ 825 (973)
....++||||+.++ +.+++.. ....++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.
T Consensus 80 ~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~ 155 (305)
T 2wtk_C 80 KQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGV 155 (305)
T ss_dssp --CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred CCeEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccc
Confidence 46789999999977 7777654 34566788899999999999999999 999999999999999999999999999
Q ss_pred chhccCCCCccCCCCCcccccccccccccCcccccCCC--CCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhH
Q 039720 826 ARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGD--LSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKM 903 (973)
Q Consensus 826 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~ 903 (973)
+....... .........||+.|+|||++.+.. ++.++||||||+++|+|++|+.||...... .... ..
T Consensus 156 ~~~~~~~~------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~--~i 225 (305)
T 2wtk_C 156 AEALHPFA------ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY--KLFE--NI 225 (305)
T ss_dssp CEECCTTC------SSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHH--HH
T ss_pred ccccCccc------cccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHH--HH
Confidence 98654321 122223456899999999987654 378999999999999999999999753211 1101 00
Q ss_pred hcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 904 ALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
... . ...+..+...+.+++.+||+.||++||+++|+++.
T Consensus 226 ~~~-~---------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 226 GKG-S---------------YAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp HHC-C---------------CCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred hcC-C---------------CCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 000 0 00111234567789999999999999999999975
No 257
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.3e-36 Score=341.42 Aligned_cols=280 Identities=22% Similarity=0.277 Sum_probs=205.7
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceE
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK-KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFK 751 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 751 (973)
.++|.+.+.||+|+||+||+|++..+|+.||||++.... ......+.+|+++++.++||||+++++++....+......
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 468999999999999999999999999999999996433 3345678899999999999999999999876556666889
Q ss_pred EEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhccC
Q 039720 752 AIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLSH 831 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~~ 831 (973)
++||||+. |+|.+++.. ...++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 90 ~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVIST-QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164 (353)
T ss_dssp EEEECCCS-EEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EEEEeccC-ccHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccccccc
Confidence 99999997 589998876 4567788999999999999999999 999999999999999999999999999987643
Q ss_pred CCCccCC--CCCcccccccccccccCcccccC-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHh-cCc
Q 039720 832 HPFLVAP--EGQSSSIEMKGTIGYIGPEYGMG-GDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMA-LPK 907 (973)
Q Consensus 832 ~~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~-~~~ 907 (973)
....... ..........||+.|+|||++.+ ..++.++|||||||++|+|++|+.||........ +....... .+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~ 243 (353)
T 2b9h_A 165 SAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ-LLLIFGIIGTPH 243 (353)
T ss_dssp ---------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCC
T ss_pred ccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCCCc
Confidence 2210000 00112234578999999998654 7789999999999999999999999976432111 11111100 000
Q ss_pred --cccccc-Cccc---c---cccCC---CchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 908 --KVMGIV-DPSL---L---MEARG---PSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 908 --~~~~~~-~~~~---~---~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
...... .... . ..... .......+..+.+++.+||+.||++|||++|+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp STTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000 0000 0 00000 00112345667899999999999999999999874
No 258
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.4e-36 Score=334.18 Aligned_cols=274 Identities=20% Similarity=0.308 Sum_probs=199.3
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeec---------
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSI--------- 743 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--------- 743 (973)
.++|++.+.||+|+||+||+|++..+++.||+|++........+.+.+|+++++.++||||+++++++...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 36899999999999999999999999999999999877666678899999999999999999999987432
Q ss_pred ccCCCceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEec-CCCcEEEec
Q 039720 744 DFKGADFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLD-HDMVAHVSD 822 (973)
Q Consensus 744 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~-~~~~~kl~D 822 (973)
.+.+....++||||+. |+|.+++.. +...+..++.++.|++.||+|||++ +|+||||||+||+++ .++.+||+|
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~D 164 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQ-GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGD 164 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEECC
T ss_pred cccccCceeEEeeccC-CCHHHHhhc-CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEcc
Confidence 1234578899999998 699999875 4567788899999999999999999 999999999999997 567999999
Q ss_pred cccchhccCCCCccCCCCCcccccccccccccCcccccC-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhh
Q 039720 823 FGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMG-GDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYA 901 (973)
Q Consensus 823 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~ 901 (973)
||.++...... ..........+|+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .+....
T Consensus 165 fg~~~~~~~~~-----~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~~~ 238 (320)
T 2i6l_A 165 FGLARIMDPHY-----SHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE-QMQLIL 238 (320)
T ss_dssp CTTCBCC-------------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHH
T ss_pred CccccccCCCc-----ccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHH
Confidence 99998654321 01122234467899999998765 678999999999999999999999997643211 111111
Q ss_pred hHhcCcc-------cccccCcccccccCCC-----chhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 902 KMALPKK-------VMGIVDPSLLMEARGP-----SKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 902 ~~~~~~~-------~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
.. .+.. ....+..........+ ......+..+.+++.+||+.||++|||++|+++.
T Consensus 239 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 239 ES-IPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HH-SCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred Hh-cCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 00 0000 0000000000000000 0112345678899999999999999999999874
No 259
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=2.6e-36 Score=334.91 Aligned_cols=273 Identities=22% Similarity=0.349 Sum_probs=202.7
Q ss_pred HhhcCCcCCccccccceeEEEEEEC-CCCcEEEEEEeecccc--hhHHHHHHHHHHHHhc---CCCCceeEEeEeeeccc
Q 039720 672 ATKEFSSSNRIGKGSFGFVYKGNLG-EDGMSVAVKVMNLDKK--GATKSFVAECEALRNI---RHRNLIKIITICSSIDF 745 (973)
Q Consensus 672 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~ 745 (973)
..++|++.+.||+|+||+||+|++. .+|+.||+|+++.... .....+.+|+.+++.+ +||||+++++++.....
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 4578999999999999999999995 6789999999975432 1233466777776666 89999999999864333
Q ss_pred CCCceEEEEEeeccCCCHHHHhhhcC--CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEecc
Q 039720 746 KGADFKAIVYEYMQYGSVDDWLHHTN--DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 823 (973)
Q Consensus 746 ~~~~~~~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Df 823 (973)
......++||||+. |+|.+++.... ..++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEecC
Confidence 45678999999998 69999987654 367788999999999999999999 9999999999999999999999999
Q ss_pred ccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhH
Q 039720 824 GLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKM 903 (973)
Q Consensus 824 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~ 903 (973)
|.++.... ........||+.|+|||++.+..++.++|||||||++|+|++|+.||....... .+......
T Consensus 165 g~~~~~~~---------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~~ 234 (326)
T 1blx_A 165 GLARIYSF---------QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDV 234 (326)
T ss_dssp CSCCCCCG---------GGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHH
T ss_pred cccccccC---------CCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHH
Confidence 99975432 112334568999999999999999999999999999999999999997643221 11111111
Q ss_pred -hcCcc--ccc-ccCcc--cccc--cCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 904 -ALPKK--VMG-IVDPS--LLME--ARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 904 -~~~~~--~~~-~~~~~--~~~~--~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
..+.. ... ...+. +... ..........+..+.+++.+||+.||++||+++|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 235 IGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp HCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000 000 00000 0000 00001112344567789999999999999999999853
No 260
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=4.4e-37 Score=335.23 Aligned_cols=260 Identities=26% Similarity=0.378 Sum_probs=195.8
Q ss_pred hhcCCcCCccccccceeEEEEEECC-CCc--EEEEEEeecc---cchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccC
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGE-DGM--SVAVKVMNLD---KKGATKSFVAECEALRNIRHRNLIKIITICSSIDFK 746 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~--~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 746 (973)
.++|++.+.||+|+||+||+|++.. +++ .||||+++.. .....+.+.+|+++++.++||||+++++++..
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 92 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT---- 92 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcc----
Confidence 3689999999999999999998643 333 6899998754 23456788999999999999999999998653
Q ss_pred CCceEEEEEeeccCCCHHHHhhhc-CCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEecccc
Q 039720 747 GADFKAIVYEYMQYGSVDDWLHHT-NDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 825 (973)
Q Consensus 747 ~~~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~ 825 (973)
...++|+||+++++|.+++... ....+..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 93 --~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~ 167 (291)
T 1u46_A 93 --PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGL 167 (291)
T ss_dssp --SSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTT
T ss_pred --CCceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccc
Confidence 3478999999999999999764 4567788999999999999999999 999999999999999999999999999
Q ss_pred chhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCccHhhhhhHh
Q 039720 826 ARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHGYAKMA 904 (973)
Q Consensus 826 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~~~~~~~~~~~~~ 904 (973)
+........ .........+|+.|+|||++.+..++.++||||||+++|+|++ |+.||....... . ....
T Consensus 168 ~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~---~~~~ 237 (291)
T 1u46_A 168 MRALPQNDD-----HYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ--I---LHKI 237 (291)
T ss_dssp CEECCC-CC-----EEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--H---HHHH
T ss_pred ccccccccc-----chhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHH--H---HHHH
Confidence 987643220 0112223457788999999988889999999999999999999 999997543211 1 1100
Q ss_pred cCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccc
Q 039720 905 LPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGE 964 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 964 (973)
.... ........++..+.+++.+||+.||++||+++|+++.|+++..
T Consensus 238 ~~~~-------------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 238 DKEG-------------ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp HTSC-------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred HccC-------------CCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 0000 0011112344567899999999999999999999999998753
No 261
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=3.5e-36 Score=327.35 Aligned_cols=253 Identities=26% Similarity=0.313 Sum_probs=203.8
Q ss_pred HhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCc
Q 039720 672 ATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK--KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGAD 749 (973)
Q Consensus 672 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 749 (973)
..++|++.+.||+|+||+||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++.. ..
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~ 94 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED-----SS 94 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----SS
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeC-----CC
Confidence 4578999999999999999999999899999999997543 2346778999999999999999999998654 47
Q ss_pred eEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCC---CcEEEeccccc
Q 039720 750 FKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHD---MVAHVSDFGLA 826 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~---~~~kl~Dfg~a 826 (973)
..++||||+++++|.+++......++..++.++.|++.||+|||+. +|+||||||+||+++.+ +.+||+|||++
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~ 171 (287)
T 2wei_A 95 SFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (287)
T ss_dssp EEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred eEEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcc
Confidence 8999999999999999998877888899999999999999999999 99999999999999764 47999999999
Q ss_pred hhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcC
Q 039720 827 RFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALP 906 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 906 (973)
...... .......||+.|+|||++.+ .++.++||||||+++|+|++|+.||...... .+.......
T Consensus 172 ~~~~~~---------~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~-- 237 (287)
T 2wei_A 172 TCFQQN---------TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY--DILKRVETG-- 237 (287)
T ss_dssp GTBCCC---------SSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHC--
T ss_pred eeecCC---------CccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH--HHHHHHHcC--
Confidence 865432 12223468999999998765 4899999999999999999999999754321 111110000
Q ss_pred cccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 907 KKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
. .... .......+..+.+++.+||+.||++|||++|+++.
T Consensus 238 ~-----~~~~-------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 238 K-----YAFD-------LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp C-----CCCC-------SGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred C-----CCCC-------chhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 0 0000 01112334567889999999999999999999973
No 262
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=9.9e-37 Score=337.39 Aligned_cols=270 Identities=17% Similarity=0.200 Sum_probs=186.2
Q ss_pred cccchhhHHHHHHHHhhccCCCcCCCCCC----CCCCCCCceeeeEeeC--------CCCeEEEEEeeccCccccccCCC
Q 039720 15 RHATSHVKHATVTFNMQQLHDPLGVTKSW----NNSINLCQWTGVTCGH--------RHQRVTKLDLESQNIGGFLSPYI 82 (973)
Q Consensus 15 ~~~~~~~~~~ll~~~~~~~~d~~~~l~sw----~~~~~~c~w~gv~C~~--------~~~~v~~l~l~~~~l~g~~~~~l 82 (973)
.++...+++||++||+....|+.+.+++| ..+.++|.|.||+|+. ...+|+.|+|+++++. .+|+.+
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l 100 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQA 100 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCG
T ss_pred cccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhh
Confidence 45567789999999998878998888999 4567899999999952 3457889999999987 788888
Q ss_pred cCCCCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhcc------
Q 039720 83 GNLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGN------ 156 (973)
Q Consensus 83 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~------ 156 (973)
+++++|++|+|++|+++ .+|..++++++|++|+|++|.++ .+|..++++++|++|++++|++.+.+|..+..
T Consensus 101 ~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~ 178 (328)
T 4fcg_A 101 FRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGE 178 (328)
T ss_dssp GGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCC
T ss_pred hhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhh
Confidence 89999999999999998 88988999999999999999998 78888888888888888888888888876654
Q ss_pred ---ccccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCc
Q 039720 157 ---WLKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLD 233 (973)
Q Consensus 157 ---l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 233 (973)
+++|++|+|++|+++ .+|..|+++++|++|+|++|+++ .+|..++++++|++|+|++|.+.+.+|..+.++++|+
T Consensus 179 ~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~ 256 (328)
T 4fcg_A 179 HQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLK 256 (328)
T ss_dssp EEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCC
T ss_pred hccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCC
Confidence 555566666655555 45555555555555555555555 3444555555555555555555555555555555555
Q ss_pred EEEccCCccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCc
Q 039720 234 EAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENH 290 (973)
Q Consensus 234 ~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 290 (973)
+|+|++|.+.+.+|..+. ++++|++|+|++|.+.+.+|..+.++++|+.+++..|.
T Consensus 257 ~L~L~~n~~~~~~p~~~~-~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~ 312 (328)
T 4fcg_A 257 RLILKDCSNLLTLPLDIH-RLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHL 312 (328)
T ss_dssp EEECTTCTTCCBCCTTGG-GCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGG
T ss_pred EEECCCCCchhhcchhhh-cCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHH
Confidence 555554444444444433 34444444444444444444444444444444444433
No 263
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.2e-36 Score=348.94 Aligned_cols=266 Identities=23% Similarity=0.292 Sum_probs=195.2
Q ss_pred hcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeeccc-CCCceEE
Q 039720 674 KEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDF-KGADFKA 752 (973)
Q Consensus 674 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~~~~~~~ 752 (973)
.+|++.+.||+|+||+||+|++..+|+.||||++..+.. ...+|+++++.++||||+++++++..... .+....+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 479999999999999999999999999999999965432 23469999999999999999998754321 2334567
Q ss_pred EEEeeccCCCHHHHhh----hcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCC-CcEEEeccccch
Q 039720 753 IVYEYMQYGSVDDWLH----HTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHD-MVAHVSDFGLAR 827 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~----~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~-~~~kl~Dfg~a~ 827 (973)
+||||+++ ++.+.+. ....+++..++.++.||+.||+|||+. +|+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 99999986 5665554 245567788899999999999999999 99999999999999965 578999999998
Q ss_pred hccCCCCccCCCCCcccccccccccccCcccccCC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhc-
Q 039720 828 FLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGG-DLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMAL- 905 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~- 905 (973)
..... .......||+.|+|||++.+. .|+.++|||||||++|||++|+.||...... ..+....+...
T Consensus 206 ~~~~~---------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~-~~l~~i~~~lg~ 275 (420)
T 1j1b_A 206 QLVRG---------EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGT 275 (420)
T ss_dssp ECCTT---------CCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCS
T ss_pred hcccC---------CCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCC
Confidence 65432 122345689999999998765 7899999999999999999999999864322 11222111110
Q ss_pred Cc--ccccccCcc-----cccccCCCc---hhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 906 PK--KVMGIVDPS-----LLMEARGPS---KFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 906 ~~--~~~~~~~~~-----~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
+. .+.. .++. +......+. ........+.+++.+||+.||++||++.|++++
T Consensus 276 p~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 276 PTREQIRE-MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp CCHHHHHH-HCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCHHHHHh-hChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 00 0000 0000 000000000 011234567899999999999999999999864
No 264
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=3e-36 Score=336.26 Aligned_cols=264 Identities=19% Similarity=0.234 Sum_probs=200.8
Q ss_pred hhcCCcCCccccccceeEEEEEE-CCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCC------CceeEEeEeeeccc
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNL-GEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHR------NLIKIITICSSIDF 745 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~------niv~~~~~~~~~~~ 745 (973)
.++|++.+.||+|+||+||+|.+ ..+++.||||+++.. ....+.+.+|+++++.++|+ +++++++++..
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~--- 88 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH--- 88 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE---
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc---
Confidence 36899999999999999999998 568899999999743 23456788899999888665 48999998654
Q ss_pred CCCceEEEEEeeccCCCHHHHhhhcC--CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecC---------
Q 039720 746 KGADFKAIVYEYMQYGSVDDWLHHTN--DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDH--------- 814 (973)
Q Consensus 746 ~~~~~~~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~--------- 814 (973)
....++||||+ +++|.+++.... ...+..+..++.|++.||+|||++ +|+||||||+||+++.
T Consensus 89 --~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~ 162 (339)
T 1z57_A 89 --HGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNP 162 (339)
T ss_dssp --TTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC-
T ss_pred --CCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCC
Confidence 37899999999 899999998765 456788899999999999999999 9999999999999987
Q ss_pred ----------CCcEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCC
Q 039720 815 ----------DMVAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRR 884 (973)
Q Consensus 815 ----------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~ 884 (973)
++.+||+|||.++.... ......||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus 163 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~ 231 (339)
T 1z57_A 163 KIKRDERTLINPDIKVVDFGSATYDDE-----------HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGF 231 (339)
T ss_dssp ---CEEEEESCCCEEECCCSSCEETTS-----------CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSS
T ss_pred ccccccccccCCCceEeeCcccccCcc-----------ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCC
Confidence 66899999999975432 122456899999999999999999999999999999999999
Q ss_pred CCCCCCCCCCccHhhhhhHh--cCcccccccC-ccc-------cc---------------ccCCCchhHHHHHHHHHHHh
Q 039720 885 RPTDNMFNDGLTLHGYAKMA--LPKKVMGIVD-PSL-------LM---------------EARGPSKFEECLVAVVRTGV 939 (973)
Q Consensus 885 ~Pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~-------~~---------------~~~~~~~~~~~~~~l~~li~ 939 (973)
.||......+ ......... .+........ ... +. ..........+...+.+++.
T Consensus 232 ~pf~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 310 (339)
T 1z57_A 232 TVFPTHDSKE-HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQ 310 (339)
T ss_dssp CSCCCSCHHH-HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHH
T ss_pred CCCCCCChHH-HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHH
Confidence 9997643221 111111110 1110000000 000 00 00001112345678899999
Q ss_pred hcCCCCCCCCCCHHHHHHH
Q 039720 940 ACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 940 ~cl~~dP~~RPs~~evl~~ 958 (973)
+||+.||++|||++|+++.
T Consensus 311 ~~L~~dP~~Rpt~~ell~h 329 (339)
T 1z57_A 311 KMLEYDPAKRITLREALKH 329 (339)
T ss_dssp HHTCSSTTTSCCHHHHTTS
T ss_pred HHhCcCcccccCHHHHhcC
Confidence 9999999999999999864
No 265
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=3.2e-36 Score=330.33 Aligned_cols=265 Identities=21% Similarity=0.315 Sum_probs=194.4
Q ss_pred HhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecc-------
Q 039720 672 ATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSID------- 744 (973)
Q Consensus 672 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------- 744 (973)
..++|++.+.||+|+||+||+|++..+++.||||+++.. ....+.+.+|+.+++.++||||+++++++....
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 356899999999999999999999999999999999643 334577899999999999999999999876521
Q ss_pred -cCCCceEEEEEeeccCCCHHHHhhhcC-CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEec
Q 039720 745 -FKGADFKAIVYEYMQYGSVDDWLHHTN-DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSD 822 (973)
Q Consensus 745 -~~~~~~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~D 822 (973)
.......++||||+++|+|.+++.... ...+..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEee
Confidence 123577899999999999999998644 345577889999999999999999 999999999999999999999999
Q ss_pred cccchhccCCCCccC------CCCCcccccccccccccCcccccCC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCc
Q 039720 823 FGLARFLSHHPFLVA------PEGQSSSIEMKGTIGYIGPEYGMGG-DLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGL 895 (973)
Q Consensus 823 fg~a~~~~~~~~~~~------~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~ 895 (973)
||.++.......... ...........||+.|+|||++.+. .++.++|||||||++|+|++ ||......
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~-- 234 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMER-- 234 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHH--
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhH--
Confidence 999986543210000 0001222345689999999998765 78999999999999999998 55422111
Q ss_pred cHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 896 TLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
......... ...... +......+..+.+++.+||+.||++|||++|+++.
T Consensus 235 --~~~~~~~~~------~~~~~~-----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 235 --VNILKKLRS------VSIEFP-----PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp --HHHHHHHHS------TTCCCC-----TTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred --HHHHHhccc------cccccC-----ccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 011110000 000010 11112334557789999999999999999999874
No 266
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=3.7e-36 Score=341.93 Aligned_cols=267 Identities=22% Similarity=0.280 Sum_probs=193.5
Q ss_pred hcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeeccc-CCCceEE
Q 039720 674 KEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDF-KGADFKA 752 (973)
Q Consensus 674 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~~~~~~~ 752 (973)
.+|++.+.||+|+||+||+|++..++. ||+|++..+... ..+|+++++.++||||+++++++..... .+....+
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 579999999999999999999976555 888888644321 2369999999999999999999865422 3344578
Q ss_pred EEEeeccCCCHHHHhh---hcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEec-CCCcEEEeccccchh
Q 039720 753 IVYEYMQYGSVDDWLH---HTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLD-HDMVAHVSDFGLARF 828 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~-~~~~~kl~Dfg~a~~ 828 (973)
+||||++++.+..... .....++..++.++.|++.||+|||+. +|+||||||+||+++ .++.+||+|||+|+.
T Consensus 115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~ 191 (394)
T 4e7w_A 115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKI 191 (394)
T ss_dssp EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence 9999998754443322 245667788899999999999999999 999999999999999 799999999999986
Q ss_pred ccCCCCccCCCCCcccccccccccccCcccccCC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHh-cC
Q 039720 829 LSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGG-DLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMA-LP 906 (973)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~-~~ 906 (973)
.... .......||+.|+|||++.+. .|+.++||||+||++|||++|+.||......+ .+....+.. .+
T Consensus 192 ~~~~---------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~p 261 (394)
T 4e7w_A 192 LIAG---------EPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID-QLVEIIKVLGTP 261 (394)
T ss_dssp CCTT---------CCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCC
T ss_pred ccCC---------CCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCC
Confidence 5432 222345689999999998765 58999999999999999999999998653221 111111110 00
Q ss_pred cc-cccccCccccc---ccCCCch-----hHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 907 KK-VMGIVDPSLLM---EARGPSK-----FEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 907 ~~-~~~~~~~~~~~---~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
.. .....++.... ....... .......+.+++.+||+.||++|||+.|++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 262 SREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp CHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred CHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 00 00000000000 0000000 11234567899999999999999999999875
No 267
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.3e-36 Score=344.31 Aligned_cols=273 Identities=18% Similarity=0.252 Sum_probs=184.9
Q ss_pred hcCCc-CCccccccceeEEEEEEC--CCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCce
Q 039720 674 KEFSS-SNRIGKGSFGFVYKGNLG--EDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADF 750 (973)
Q Consensus 674 ~~y~~-~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 750 (973)
+.|.+ .++||+|+||+||+|+++ .+++.||||++.... ....+.+|+.+++.++||||+++++++.. .....
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~---~~~~~ 94 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLS---HADRK 94 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEE---TTTTE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEec---CCCCe
Confidence 45766 568999999999999975 478999999996432 34568899999999999999999998754 23578
Q ss_pred EEEEEeeccCCCHHHHhhhcC---------CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe----cCCCc
Q 039720 751 KAIVYEYMQYGSVDDWLHHTN---------DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLL----DHDMV 817 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~---------~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl----~~~~~ 817 (973)
.++||||+. |+|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+|||+ +.++.
T Consensus 95 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~ 170 (405)
T 3rgf_A 95 VWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGR 170 (405)
T ss_dssp EEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTC
T ss_pred EEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCc
Confidence 999999997 47887775321 366778899999999999999999 99999999999999 67789
Q ss_pred EEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCC--
Q 039720 818 AHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGG-DLSMTGDVYSFGILLLEMFTRRRPTDNMFNDG-- 894 (973)
Q Consensus 818 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~-- 894 (973)
+||+|||+|+...... ..........||+.|+|||++.+. .++.++|||||||++|||++|+.||.....+.
T Consensus 171 ~kl~Dfg~a~~~~~~~-----~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~ 245 (405)
T 3rgf_A 171 VKIADMGFARLFNSPL-----KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKT 245 (405)
T ss_dssp EEECCTTCCC---------------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC-----
T ss_pred EEEEECCCceecCCCC-----cccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccc
Confidence 9999999998764321 111223346789999999998874 58999999999999999999999997543321
Q ss_pred ------ccHhhhhhHh-cCc--ccccc---cCc-----ccccccCCCchhH--------HHHHHHHHHHhhcCCCCCCCC
Q 039720 895 ------LTLHGYAKMA-LPK--KVMGI---VDP-----SLLMEARGPSKFE--------ECLVAVVRTGVACSMESPSER 949 (973)
Q Consensus 895 ------~~~~~~~~~~-~~~--~~~~~---~~~-----~~~~~~~~~~~~~--------~~~~~l~~li~~cl~~dP~~R 949 (973)
..+....... .+. ....+ ... .+........... .....+.+++.+||+.||++|
T Consensus 246 ~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R 325 (405)
T 3rgf_A 246 SNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKR 325 (405)
T ss_dssp -CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGS
T ss_pred cccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccC
Confidence 1111111100 000 00000 000 0000000000000 013456789999999999999
Q ss_pred CCHHHHHHHHH
Q 039720 950 MQMTAVVKKLC 960 (973)
Q Consensus 950 Ps~~evl~~L~ 960 (973)
||++|++++-.
T Consensus 326 ~ta~e~L~hp~ 336 (405)
T 3rgf_A 326 ITSEQAMQDPY 336 (405)
T ss_dssp CCHHHHHTSGG
T ss_pred CCHHHHhcChh
Confidence 99999998644
No 268
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=4.2e-36 Score=334.21 Aligned_cols=257 Identities=19% Similarity=0.255 Sum_probs=175.8
Q ss_pred hhcCCcCC-ccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceE
Q 039720 673 TKEFSSSN-RIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFK 751 (973)
Q Consensus 673 ~~~y~~~~-~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 751 (973)
.++|.+.+ .||+|+||+||+|++..+++.||||++..... ...+....++.+.||||+++++++... .......
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~e~~~~~~~~~h~~i~~~~~~~~~~-~~~~~~~ 101 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK----ARQEVDHHWQASGGPHIVCILDVYENM-HHGKRCL 101 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHH----HHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHH----HHHHHHHHHHhcCCCChHHHHHHHhhc-cCCCceE
Confidence 46898865 59999999999999999999999999964321 122223345677999999999987653 2334668
Q ss_pred EEEEeeccCCCHHHHhhhcC--CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecC---CCcEEEeccccc
Q 039720 752 AIVYEYMQYGSVDDWLHHTN--DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDH---DMVAHVSDFGLA 826 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~---~~~~kl~Dfg~a 826 (973)
++||||+++|+|.+++.... .+++.+++.++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||++
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~ 178 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 178 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccc
Confidence 99999999999999998754 467788999999999999999999 9999999999999976 456999999999
Q ss_pred hhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcC
Q 039720 827 RFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALP 906 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 906 (973)
+.... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.................
T Consensus 179 ~~~~~----------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-- 246 (336)
T 3fhr_A 179 KETTQ----------NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIR-- 246 (336)
T ss_dssp EEC--------------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------
T ss_pred eeccc----------cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhh--
Confidence 75532 122345689999999999888999999999999999999999999976543211100000000
Q ss_pred cccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 039720 907 KKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKL 959 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 959 (973)
.. .... .......++..+.+++.+||+.||++|||++|+++.-
T Consensus 247 ~~-----~~~~-----~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 289 (336)
T 3fhr_A 247 LG-----QYGF-----PNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHP 289 (336)
T ss_dssp ---------CC-----CTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred cc-----cccc-----CchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 00 0000 0111123455677899999999999999999999843
No 269
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2.7e-36 Score=340.65 Aligned_cols=268 Identities=20% Similarity=0.247 Sum_probs=198.3
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCceeEEeEeeeccc-CCCc
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK--KGATKSFVAECEALRNIRHRNLIKIITICSSIDF-KGAD 749 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 749 (973)
.++|.+.+.||+|+||+||+|++..+|+.||||++.... ....+.+.+|+.+++.++||||+++++++..... ....
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 358999999999999999999999999999999997542 3345778899999999999999999998765321 1122
Q ss_pred eEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhc
Q 039720 750 FKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 829 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~ 829 (973)
..++||||+. ++|.+.+.. ..++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 194 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM--EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHA 194 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC---
T ss_pred eEEEEEcccc-ccHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCccccc
Confidence 3489999998 688887753 367788999999999999999999 9999999999999999999999999999855
Q ss_pred cCCCCccCCCCCcccccccccccccCcccccC-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHh-cC-
Q 039720 830 SHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMG-GDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMA-LP- 906 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~-~~- 906 (973)
.. ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||......+ .+....... .+
T Consensus 195 ~~-----------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~ 262 (371)
T 4exu_A 195 DA-----------EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPG 262 (371)
T ss_dssp ----------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCC
T ss_pred cc-----------CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCc
Confidence 32 1234568999999999887 688999999999999999999999997543211 111111100 00
Q ss_pred cccccccCcccc-------cccCCC---chhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 907 KKVMGIVDPSLL-------MEARGP---SKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 907 ~~~~~~~~~~~~-------~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
............ ...... .....+...+.+++.+||+.||++|||++|+++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 263 TEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 001000000000 000000 1112235678899999999999999999999875
No 270
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.2e-35 Score=338.10 Aligned_cols=336 Identities=19% Similarity=0.213 Sum_probs=181.2
Q ss_pred cccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEc
Q 039720 158 LKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYL 237 (973)
Q Consensus 158 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 237 (973)
.++++|++++|.++...+..|.++++|++|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 34444444444444222222344445555555555554444444555555555555555554444444444444444444
Q ss_pred cCCccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceecccccCCC
Q 039720 238 FKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNLGT 317 (973)
Q Consensus 238 ~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 317 (973)
++|+++ .+|..++.++++|++|++++|.+++..|..|.++++|++|+|++|++++. .+..+++|++|++++|.++.
T Consensus 125 ~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~ 200 (390)
T 3o6n_A 125 ERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST 200 (390)
T ss_dssp CSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSE
T ss_pred CCCccC-cCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccccc
Confidence 444444 45544444566666666666666665566666666666666666666543 23344455555555544321
Q ss_pred CCCCChhhhhhhcccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCccccCCCccccCCCCcCEEEcccccCCCC
Q 039720 318 RTSTDLDFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEIRNLFNLNGLGLEYNQLTGT 397 (973)
Q Consensus 318 ~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 397 (973)
+ ...++|+.|++++|+++..
T Consensus 201 ~------------------------------------------------------------~~~~~L~~L~l~~n~l~~~ 220 (390)
T 3o6n_A 201 L------------------------------------------------------------AIPIAVEELDASHNSINVV 220 (390)
T ss_dssp E------------------------------------------------------------ECCSSCSEEECCSSCCCEE
T ss_pred c------------------------------------------------------------CCCCcceEEECCCCeeeec
Confidence 0 1112344455555544422
Q ss_pred CCccccCCCCCCeEEccCcccCCCCCCccCCcCccceEEcCCCccccccccccccccccccccccCcccccCCCcccccc
Q 039720 398 IPPAIGELRNLQYLGLVGNNIRGIIPDPIGNLTLLNVLQLGFNKLQGSIPSYLGKCQNLMQLSAPNNKLNGTLPPQIFGI 477 (973)
Q Consensus 398 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~ 477 (973)
|.. ..++|+.|++++|++++. ..+..+++|++|++++|++++.
T Consensus 221 -~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~-------------------------------- 263 (390)
T 3o6n_A 221 -RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKI-------------------------------- 263 (390)
T ss_dssp -ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEE--------------------------------
T ss_pred -ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCc--------------------------------
Confidence 111 123444444444444321 2333333333333333333322
Q ss_pred ccccceeeccCCcccccCCcccccccccceeccccCcccccccccccCccchhhhcccCcccccccccchhhhccCCeec
Q 039720 478 TTLSKLLDLSENHLSGSIPLEVGNLKSLVQLDISRNNFSNEIPVTLSACTTLEYLLMQGNSFNGSIPQSLNALKSIKELD 557 (973)
Q Consensus 478 ~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 557 (973)
.|..+..+++|+.|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+++|++|+
T Consensus 264 -----------------~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~ 324 (390)
T 3o6n_A 264 -----------------MYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLY 324 (390)
T ss_dssp -----------------ESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEE
T ss_pred -----------------ChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEE
Confidence 33344455555566666666553 4445555666777777777776 5666677888888888
Q ss_pred CCCCccccccCCCCCCCCccceEeccCCcCcCcCCCCCCCCCccccccccCccccCCCCC
Q 039720 558 LSCNNLSGQIPIHLGNLPFLEYLNLSYNHFEGKVPKKGVFSNETRISLTGNEQFCGGLGE 617 (973)
Q Consensus 558 Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~l~~~~N~~~cg~~~~ 617 (973)
|++|+|++ +| +..+++|+.|++++|++.+.... ..+..+....+.+++..|+++..
T Consensus 325 L~~N~i~~-~~--~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~c~~~~~ 380 (390)
T 3o6n_A 325 LDHNSIVT-LK--LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKIDYQ 380 (390)
T ss_dssp CCSSCCCC-CC--CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCSCCCTTCE
T ss_pred CCCCccce-eC--chhhccCCEEEcCCCCccchhHH-HHHHHHHhhcccccCceeccccc
Confidence 88888874 44 67788899999999998865332 34566667778888888886543
No 271
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2.8e-36 Score=363.39 Aligned_cols=257 Identities=21% Similarity=0.339 Sum_probs=203.3
Q ss_pred hhcCCcCCccccccceeEEEEEECCC---CcEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCC
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGED---GMSVAVKVMNLDK-KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGA 748 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 748 (973)
.++|++.+.||+|+||+||+|++..+ +..||||+++... ....+.+.+|+.+++.++||||+++++++.+
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~------ 462 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE------ 462 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS------
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec------
Confidence 46899999999999999999998643 4679999986533 3345779999999999999999999998632
Q ss_pred ceEEEEEeeccCCCHHHHhhhcC-CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccch
Q 039720 749 DFKAIVYEYMQYGSVDDWLHHTN-DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 827 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~ 827 (973)
...++||||+++|+|.+++.... ..++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus 463 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~ 539 (656)
T 2j0j_A 463 NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 539 (656)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCC
T ss_pred CceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCe
Confidence 46889999999999999998654 466778899999999999999999 99999999999999999999999999998
Q ss_pred hccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCccHhhhhhHhcC
Q 039720 828 FLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHGYAKMALP 906 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~ 906 (973)
...... ........+|+.|+|||++.+..++.++|||||||++|||++ |..||...... ..........
T Consensus 540 ~~~~~~-------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~--~~~~~i~~~~- 609 (656)
T 2j0j_A 540 YMEDST-------YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRIENGE- 609 (656)
T ss_dssp SCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHHTC-
T ss_pred ecCCCc-------ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH--HHHHHHHcCC-
Confidence 664322 112223456789999999998999999999999999999997 99999754322 1111111000
Q ss_pred cccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccc
Q 039720 907 KKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGE 964 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 964 (973)
....+..++..+.+++.+||+.||++||++.|+++.|+++.+
T Consensus 610 ----------------~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 610 ----------------RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp ----------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----------------CCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 011122345677899999999999999999999999998743
No 272
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.4e-35 Score=336.20 Aligned_cols=201 Identities=23% Similarity=0.292 Sum_probs=169.2
Q ss_pred HhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcC-CC-----CceeEEeEeeeccc
Q 039720 672 ATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIR-HR-----NLIKIITICSSIDF 745 (973)
Q Consensus 672 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~~~~~~~~~~~ 745 (973)
..++|++.+.||+|+||+||+|++..+++.||||+++.. ......+..|+.+++.+. |+ +++++++++..
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~--- 127 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF--- 127 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE---
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc---
Confidence 357899999999999999999999999999999999743 234566778888888885 55 48999988654
Q ss_pred CCCceEEEEEeeccCCCHHHHhhhcC--CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEec--CCCcEEEe
Q 039720 746 KGADFKAIVYEYMQYGSVDDWLHHTN--DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLD--HDMVAHVS 821 (973)
Q Consensus 746 ~~~~~~~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~--~~~~~kl~ 821 (973)
....++||||+. |+|.+++.... ...+..+..++.|++.||.|||++ ..+|+||||||+|||++ .++.+||+
T Consensus 128 --~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~ 203 (382)
T 2vx3_A 128 --RNHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIV 203 (382)
T ss_dssp --TTEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEEC
T ss_pred --CCceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEE
Confidence 378999999996 59999987653 467788899999999999999952 22899999999999995 47789999
Q ss_pred ccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCC
Q 039720 822 DFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMF 891 (973)
Q Consensus 822 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~ 891 (973)
|||+|+.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 204 DFG~a~~~~~-----------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 204 DFGSSCQLGQ-----------RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp CCTTCEETTC-----------CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred eccCceeccc-----------ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999986532 1224568999999999999999999999999999999999999998643
No 273
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=2.1e-36 Score=334.47 Aligned_cols=243 Identities=20% Similarity=0.283 Sum_probs=199.3
Q ss_pred HhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccch------hHHHHHHHHHHHHhcC--CCCceeEEeEeeec
Q 039720 672 ATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKG------ATKSFVAECEALRNIR--HRNLIKIITICSSI 743 (973)
Q Consensus 672 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~ 743 (973)
..++|++.+.||+|+||+||+|++..+++.||||+++..... ....+.+|+.++++++ |||++++++++..
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~- 119 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER- 119 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC-
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec-
Confidence 457899999999999999999999999999999999754321 2245678999999996 5999999998654
Q ss_pred ccCCCceEEEEEeeccC-CCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEec-CCCcEEEe
Q 039720 744 DFKGADFKAIVYEYMQY-GSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLD-HDMVAHVS 821 (973)
Q Consensus 744 ~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~-~~~~~kl~ 821 (973)
.+..++|+||+.+ ++|.+++.......+..++.++.|++.||+|||+. +|+||||||+||+++ .++.+||+
T Consensus 120 ----~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~ 192 (320)
T 3a99_A 120 ----PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLI 192 (320)
T ss_dssp ----SSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEEC
T ss_pred ----CCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEe
Confidence 4789999999986 89999999888888888999999999999999999 999999999999999 78999999
Q ss_pred ccccchhccCCCCccCCCCCcccccccccccccCcccccCCCC-CcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhh
Q 039720 822 DFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDL-SMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGY 900 (973)
Q Consensus 822 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~ 900 (973)
|||+++..... ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||.... ..
T Consensus 193 Dfg~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-------~~ 255 (320)
T 3a99_A 193 DFGSGALLKDT----------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EI 255 (320)
T ss_dssp CCTTCEECCSS----------CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HH
T ss_pred eCccccccccc----------cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-------hh
Confidence 99999865431 1223468999999999887766 788999999999999999999996421 00
Q ss_pred hhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 901 AKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
.... .. .....+..+.+++.+||+.||++||+++|+++.
T Consensus 256 ~~~~------------~~-------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 256 IRGQ------------VF-------FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp HHCC------------CC-------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hccc------------cc-------ccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 00 001123457789999999999999999999874
No 274
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=6.6e-36 Score=331.75 Aligned_cols=255 Identities=22% Similarity=0.261 Sum_probs=177.2
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccc-hhHHHHHHHHH-HHHhcCCCCceeEEeEeeecccCCCce
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKK-GATKSFVAECE-ALRNIRHRNLIKIITICSSIDFKGADF 750 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~~~~ 750 (973)
.++|++.+.||+|+||+||+|++..+|+.||||+++.... .....+..|.. +++.++||||+++++++.. .+.
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~-----~~~ 95 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFR-----EGD 95 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEEC-----SSE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEe-----CCc
Confidence 3689999999999999999999999999999999975432 23445566665 6777899999999998754 478
Q ss_pred EEEEEeeccCCCHHHHhhh-----cCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEecccc
Q 039720 751 KAIVYEYMQYGSVDDWLHH-----TNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 825 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~ 825 (973)
.++||||+.+ +|.+++.. .....+..+..++.|++.|+.|||+.. +|+||||||+||+++.++.+||+|||+
T Consensus 96 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~ 172 (327)
T 3aln_A 96 CWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGI 172 (327)
T ss_dssp EEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSS
T ss_pred eEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCC
Confidence 9999999985 88877763 455677888999999999999999853 899999999999999999999999999
Q ss_pred chhccCCCCccCCCCCcccccccccccccCcccc----cCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhh
Q 039720 826 ARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYG----MGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYA 901 (973)
Q Consensus 826 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~ 901 (973)
++..... .......||+.|+|||++ .+..++.++|||||||++|+|++|+.||.........+...
T Consensus 173 ~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~- 242 (327)
T 3aln_A 173 SGQLVDS---------IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQV- 242 (327)
T ss_dssp SCC---------------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCC-
T ss_pred ceecccc---------cccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHH-
Confidence 9765432 112234689999999998 45678999999999999999999999997543211111000
Q ss_pred hHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 902 KMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
.....+.+. ......+...+.+++.+||+.||++||+++|+++.
T Consensus 243 --------~~~~~~~~~-----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 243 --------VKGDPPQLS-----NSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp --------CCSCCCCCC-----CCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred --------hcCCCCCCC-----CcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 000000010 01112234567889999999999999999999763
No 275
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=6.5e-36 Score=338.37 Aligned_cols=270 Identities=17% Similarity=0.220 Sum_probs=200.6
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcC-----------CCCceeEEeEee
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIR-----------HRNLIKIITICS 741 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~~~~~~~ 741 (973)
.++|++.+.||+|+||+||+|++..+++.||||++..+. ...+.+.+|+++++++. ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 358999999999999999999999999999999997432 34566888999988886 899999999876
Q ss_pred ecccCCCceEEEEEeeccCCCHHHHhhhc--CCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEec------
Q 039720 742 SIDFKGADFKAIVYEYMQYGSVDDWLHHT--NDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLD------ 813 (973)
Q Consensus 742 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~------ 813 (973)
.. .......++||||+ +++|.+++... ...+...++.++.||+.||+|||+++ +|+||||||+||+++
T Consensus 97 ~~-~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 97 HK-GPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EE-ETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTT
T ss_pred cc-CCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCc
Confidence 53 12334789999999 89999999763 34677889999999999999999853 899999999999994
Q ss_pred CCCcEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCC
Q 039720 814 HDMVAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFND 893 (973)
Q Consensus 814 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~ 893 (973)
..+.+||+|||+++.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 173 ~~~~~kl~Dfg~a~~~~~-----------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 241 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDE-----------HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGH 241 (373)
T ss_dssp TEEEEEECCCTTCEETTB-----------CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC------
T ss_pred CcceEEEcccccccccCC-----------CCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCccc
Confidence 444899999999986532 122346899999999999999999999999999999999999999865432
Q ss_pred Cc-----cHhhhhhHh--cCcc----------------ccccc-Cccccc----ccCCCchhHHHHHHHHHHHhhcCCCC
Q 039720 894 GL-----TLHGYAKMA--LPKK----------------VMGIV-DPSLLM----EARGPSKFEECLVAVVRTGVACSMES 945 (973)
Q Consensus 894 ~~-----~~~~~~~~~--~~~~----------------~~~~~-~~~~~~----~~~~~~~~~~~~~~l~~li~~cl~~d 945 (973)
.. .+....... .+.. ....+ ....+. .......+..+...+.+++.+||+.|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 321 (373)
T 1q8y_A 242 SYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLD 321 (373)
T ss_dssp ---CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSS
T ss_pred ccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccC
Confidence 11 111111100 0000 00000 000000 00011233567788999999999999
Q ss_pred CCCCCCHHHHHHH
Q 039720 946 PSERMQMTAVVKK 958 (973)
Q Consensus 946 P~~RPs~~evl~~ 958 (973)
|++|||++|+++.
T Consensus 322 P~~Rpt~~ell~h 334 (373)
T 1q8y_A 322 PRKRADAGGLVNH 334 (373)
T ss_dssp TTTCBCHHHHHTC
T ss_pred ccccCCHHHHhhC
Confidence 9999999999874
No 276
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.3e-36 Score=331.86 Aligned_cols=246 Identities=22% Similarity=0.294 Sum_probs=193.3
Q ss_pred HHHHhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccch------hHHHHHHHHHHHHhc----CCCCceeEEe
Q 039720 669 LSKATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKG------ATKSFVAECEALRNI----RHRNLIKIIT 738 (973)
Q Consensus 669 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l----~h~niv~~~~ 738 (973)
.....++|++.+.||+|+||.||+|++..+++.||||+++..... ....+.+|+.+++++ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 344567899999999999999999999999999999999754321 223456799999988 8999999999
Q ss_pred EeeecccCCCceEEEEEee-ccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEec-CCC
Q 039720 739 ICSSIDFKGADFKAIVYEY-MQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLD-HDM 816 (973)
Q Consensus 739 ~~~~~~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~-~~~ 816 (973)
++.. .+..++|+|| +.+++|.+++.......+..++.++.|++.||+|||+. +|+||||||+||+++ .++
T Consensus 106 ~~~~-----~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 177 (312)
T 2iwi_A 106 WFET-----QEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRG 177 (312)
T ss_dssp EC----------CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTT
T ss_pred EEec-----CCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCC
Confidence 8543 4778999999 78999999999887888899999999999999999999 999999999999999 889
Q ss_pred cEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCCCC-CcccchHHHHHHHHHHHhCCCCCCCCCCCCc
Q 039720 817 VAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDL-SMTGDVYSFGILLLEMFTRRRPTDNMFNDGL 895 (973)
Q Consensus 817 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~ 895 (973)
.+||+|||+++..... ......||+.|+|||++.+..+ +.++||||||+++|+|++|+.||....
T Consensus 178 ~~kl~dfg~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~---- 243 (312)
T 2iwi_A 178 CAKLIDFGSGALLHDE----------PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ---- 243 (312)
T ss_dssp EEEECCCSSCEECCSS----------CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----
T ss_pred eEEEEEcchhhhcccC----------cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH----
Confidence 9999999999865432 1234568999999999887766 458999999999999999999996421
Q ss_pred cHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 896 TLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
...... ..........+.+++.+||+.||++||+++|+++.
T Consensus 244 ---~~~~~~-------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 244 ---EILEAE-------------------LHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp ---HHHHTC-------------------CCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ---HHhhhc-------------------cCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000 00011233456789999999999999999999974
No 277
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.7e-35 Score=326.17 Aligned_cols=253 Identities=22% Similarity=0.348 Sum_probs=194.8
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhcC--CCCceeEEeEeeecccCCC
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK--KGATKSFVAECEALRNIR--HRNLIKIITICSSIDFKGA 748 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~~ 748 (973)
.++|++.+.||+|+||+||+|++. +++.||||++.... ....+.+.+|++++++++ ||||+++++++.. .
T Consensus 27 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~-----~ 100 (313)
T 3cek_A 27 GRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT-----D 100 (313)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEEC-----S
T ss_pred cceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeec-----C
Confidence 468999999999999999999985 69999999997543 334577899999999997 5999999998654 4
Q ss_pred ceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchh
Q 039720 749 DFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 828 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~ 828 (973)
...++||| +.+++|.+++.......+..++.++.|++.||.|||+. +|+||||||+||+++ ++.+||+|||+++.
T Consensus 101 ~~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~ 175 (313)
T 3cek_A 101 QYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQ 175 (313)
T ss_dssp SEEEEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCC
T ss_pred CEEEEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEE-CCeEEEeecccccc
Confidence 68999999 66789999999887788888999999999999999999 999999999999996 48999999999986
Q ss_pred ccCCCCccCCCCCcccccccccccccCcccccC-----------CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccH
Q 039720 829 LSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMG-----------GDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTL 897 (973)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~ 897 (973)
..... .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.........+
T Consensus 176 ~~~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~ 249 (313)
T 3cek_A 176 MQPDT------TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 249 (313)
T ss_dssp --------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHH
T ss_pred ccCcc------ccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHH
Confidence 54321 1112234568999999999875 478899999999999999999999997543321111
Q ss_pred hhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 039720 898 HGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKL 959 (973)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 959 (973)
.. . .+....... + ......+.+++.+||+.||++||+++|+++.-
T Consensus 250 ~~---~---------~~~~~~~~~--~---~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 250 HA---I---------IDPNHEIEF--P---DIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 294 (313)
T ss_dssp HH---H---------HCTTSCCCC--C---CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred HH---H---------HhcccccCC--c---ccchHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 11 1 111100000 1 11134677889999999999999999998753
No 278
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=335.93 Aligned_cols=261 Identities=22% Similarity=0.280 Sum_probs=196.2
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCce
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK--KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADF 750 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 750 (973)
.++|++.+.||+|+||+||+|++.. .||+|+++... ....+.+.+|+.++++++||||+++++++.. ...
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~ 103 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS-----PPH 103 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEEC-----SSC
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEec-----CCc
Confidence 4789999999999999999999853 49999997543 2233557789999999999999999998764 367
Q ss_pred EEEEEeeccCCCHHHHhhhcC-CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhc
Q 039720 751 KAIVYEYMQYGSVDDWLHHTN-DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 829 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~ 829 (973)
.++||||+++++|.+++.... ...+..++.++.|++.||+|||+. +|+||||||+||+++ ++.+||+|||+++..
T Consensus 104 ~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~ 179 (319)
T 2y4i_B 104 LAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSIS 179 (319)
T ss_dssp EEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC--
T ss_pred eEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccc
Confidence 999999999999999998755 567788999999999999999999 999999999999998 689999999998765
Q ss_pred cCCCCccCCCCCcccccccccccccCcccccC---------CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhh
Q 039720 830 SHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMG---------GDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGY 900 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~ 900 (973)
..... ...........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ....
T Consensus 180 ~~~~~---~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~~~ 254 (319)
T 2y4i_B 180 GVLQA---GRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA--IIWQ 254 (319)
T ss_dssp -----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHH--HHHH
T ss_pred ccccc---cccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHH
Confidence 32210 111222334468999999999864 457899999999999999999999997543221 1100
Q ss_pred hhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhccccc
Q 039720 901 AKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEIF 966 (973)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 966 (973)
... ...+... ...++..+.+++.+||+.||++||+++|+++.|+++.+..
T Consensus 255 ~~~--------~~~~~~~--------~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 255 MGT--------GMKPNLS--------QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp HHT--------TCCCCCC--------CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred hcc--------CCCCCCC--------cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 000 0000000 0112335678999999999999999999999999987554
No 279
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.5e-35 Score=332.64 Aligned_cols=268 Identities=20% Similarity=0.232 Sum_probs=198.0
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCceeEEeEeeeccc-CCCc
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK--KGATKSFVAECEALRNIRHRNLIKIITICSSIDF-KGAD 749 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 749 (973)
.++|.+.+.||+|+||+||+|++..+|+.||||++.... ....+.+.+|+.+++.++||||+++++++..... ....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 357999999999999999999999999999999996532 3345678999999999999999999998754311 1123
Q ss_pred eEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhc
Q 039720 750 FKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 829 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~ 829 (973)
..++||||+. ++|.+++.. ..++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 176 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL--KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHA 176 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC-
T ss_pred eEEEEecccc-CCHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccCC
Confidence 4589999998 588887753 467788999999999999999999 9999999999999999999999999999754
Q ss_pred cCCCCccCCCCCcccccccccccccCcccccC-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHh-c-C
Q 039720 830 SHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMG-GDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMA-L-P 906 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~-~-~ 906 (973)
.. ......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||....... .+....... . +
T Consensus 177 ~~-----------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~ 244 (353)
T 3coi_A 177 DA-----------EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPG 244 (353)
T ss_dssp ------------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH-HHHHHHHHHCBCC
T ss_pred CC-----------CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCC
Confidence 32 1224568999999999877 678999999999999999999999997543211 111111100 0 0
Q ss_pred cccccccCcc--------ccc--ccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 907 KKVMGIVDPS--------LLM--EARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 907 ~~~~~~~~~~--------~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
......+... ... ..............+.+++.+|++.||++|||++|+++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 245 TEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000000000 000 000011122345677899999999999999999999864
No 280
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=6.4e-36 Score=328.89 Aligned_cols=257 Identities=29% Similarity=0.495 Sum_probs=239.1
Q ss_pred hhhHhhhcCCcccc--CCCccccCCCCcCEEEccc-ccCCCCCCccccCCCCCCeEEccCcccCCCCCCccCCcCccceE
Q 039720 359 TMTLIAMAGNQISG--TIPPEIRNLFNLNGLGLEY-NQLTGTIPPAIGELRNLQYLGLVGNNIRGIIPDPIGNLTLLNVL 435 (973)
Q Consensus 359 ~l~~L~l~~n~l~~--~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 435 (973)
.++.|++++|++++ .+|..+..+++|++|+|++ |.+++.+|..|+++++|++|+|++|++++.+|..|..+++|++|
T Consensus 51 ~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 130 (313)
T 1ogq_A 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred eEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEE
Confidence 45566667777777 7888899999999999995 99999999999999999999999999999999999999999999
Q ss_pred EcCCCccccccccccccccccccccccCcccccCCCccccccccccceeeccCCcccccCCcccccccccceeccccCcc
Q 039720 436 QLGFNKLQGSIPSYLGKCQNLMQLSAPNNKLNGTLPPQIFGITTLSKLLDLSENHLSGSIPLEVGNLKSLVQLDISRNNF 515 (973)
Q Consensus 436 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l 515 (973)
++++|++++.+|..+..+++|++|++++|++++.+|..++.+...++.|++++|++++.+|..+..++ |+.|++++|++
T Consensus 131 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l 209 (313)
T 1ogq_A 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNML 209 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEE
T ss_pred eCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcc
Confidence 99999999999999999999999999999999999999998885556999999999999999999997 99999999999
Q ss_pred cccccccccCccchhhhcccCcccccccccchhhhccCCeecCCCCccccccCCCCCCCCccceEeccCCcCcCcCCCCC
Q 039720 516 SNEIPVTLSACTTLEYLLMQGNSFNGSIPQSLNALKSIKELDLSCNNLSGQIPIHLGNLPFLEYLNLSYNHFEGKVPKKG 595 (973)
Q Consensus 516 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~ 595 (973)
++.+|..|..+++|+.|+|++|++++.+|. +..+++|++|+|++|+|++.+|..+..+++|+.|+|++|+++|.+|..+
T Consensus 210 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~ 288 (313)
T 1ogq_A 210 EGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGG 288 (313)
T ss_dssp EECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCST
T ss_pred cCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCc
Confidence 999999999999999999999999977765 8889999999999999999999999999999999999999999999998
Q ss_pred CCCCccccccccCccccCCCCC
Q 039720 596 VFSNETRISLTGNEQFCGGLGE 617 (973)
Q Consensus 596 ~~~~~~~l~~~~N~~~cg~~~~ 617 (973)
.+++++.+++.+||++||.|..
T Consensus 289 ~l~~L~~l~l~~N~~lc~~p~~ 310 (313)
T 1ogq_A 289 NLQRFDVSAYANNKCLCGSPLP 310 (313)
T ss_dssp TGGGSCGGGTCSSSEEESTTSS
T ss_pred cccccChHHhcCCCCccCCCCC
Confidence 8999999999999999998663
No 281
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=2e-35 Score=348.54 Aligned_cols=274 Identities=21% Similarity=0.300 Sum_probs=203.8
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecc-cchhHHHHHHHHHHHHhcCCCCceeEEeEeeecc-cCCCce
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLD-KKGATKSFVAECEALRNIRHRNLIKIITICSSID-FKGADF 750 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~~~~ 750 (973)
.++|++.+.||+|+||+||+|.+..+|+.||||+++.. .....+.+.+|+++++.++||||+++++++.... +.....
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 46899999999999999999999999999999998754 3344567899999999999999999999865421 233677
Q ss_pred EEEEEeeccCCCHHHHhhhcC---CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCc---EEEeccc
Q 039720 751 KAIVYEYMQYGSVDDWLHHTN---DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMV---AHVSDFG 824 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~---~kl~Dfg 824 (973)
.++||||+++|+|.+++.... ..++..++.++.|++.||+|||+. +|+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 899999999999999998644 467788999999999999999999 9999999999999997764 9999999
Q ss_pred cchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHh
Q 039720 825 LARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMA 904 (973)
Q Consensus 825 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~ 904 (973)
.+...... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||...... ..|....
T Consensus 170 ~a~~~~~~---------~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~----~~~~~~i 236 (676)
T 3qa8_A 170 YAKELDQG---------ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP----VQWHGKV 236 (676)
T ss_dssp CCCBTTSC---------CCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH----HHSSTTC
T ss_pred cccccccc---------cccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch----hhhhhhh
Confidence 99866432 1223457899999999999999999999999999999999999999754211 1111110
Q ss_pred cCc-----ccccccCccccc--ccC-CCchhHHHHHHHHHHHhhcCCCCCCCCCCHHH-----HHHHHHhc
Q 039720 905 LPK-----KVMGIVDPSLLM--EAR-GPSKFEECLVAVVRTGVACSMESPSERMQMTA-----VVKKLCAV 962 (973)
Q Consensus 905 ~~~-----~~~~~~~~~~~~--~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e-----vl~~L~~~ 962 (973)
... ............ ..+ ........+..+.+++.+||..||++|||++| +.+.++.+
T Consensus 237 ~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~i 307 (676)
T 3qa8_A 237 REKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSI 307 (676)
T ss_dssp C------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHH
T ss_pred hcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHH
Confidence 000 000001111100 000 01223345677889999999999999999987 44555544
No 282
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2.6e-35 Score=330.91 Aligned_cols=264 Identities=19% Similarity=0.239 Sum_probs=197.6
Q ss_pred hhcCCcCCccccccceeEEEEEECCCC-cEEEEEEeecccchhHHHHHHHHHHHHhcCCCC------ceeEEeEeeeccc
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDG-MSVAVKVMNLDKKGATKSFVAECEALRNIRHRN------LIKIITICSSIDF 745 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~~~~~~~~~~~ 745 (973)
.++|++.+.||+|+||+||+|++..++ +.||+|+++.. ....+.+.+|+.+++.++|++ ++.+++++..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~--- 93 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF--- 93 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE---
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee---
Confidence 368999999999999999999998777 78999999743 234567888999999997665 8888887654
Q ss_pred CCCceEEEEEeeccCCCHHHHhhhcC--CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe-----------
Q 039720 746 KGADFKAIVYEYMQYGSVDDWLHHTN--DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLL----------- 812 (973)
Q Consensus 746 ~~~~~~~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl----------- 812 (973)
....++||||+ ++++.+++.... ..++..++.++.||+.||+|||++ +|+||||||+||++
T Consensus 94 --~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~ 167 (355)
T 2eu9_A 94 --HGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNE 167 (355)
T ss_dssp --TTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECC
T ss_pred --CCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccc
Confidence 47899999999 567777776543 567788999999999999999999 99999999999999
Q ss_pred --------cCCCcEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCC
Q 039720 813 --------DHDMVAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRR 884 (973)
Q Consensus 813 --------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~ 884 (973)
+.++.+||+|||+++.... ......||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus 168 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~ 236 (355)
T 2eu9_A 168 HKSCEEKSVKNTSIRVADFGSATFDHE-----------HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGF 236 (355)
T ss_dssp C-CCCEEEESCCCEEECCCTTCEETTS-----------CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred cccccccccCCCcEEEeecCccccccc-----------cccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCC
Confidence 5678999999999975432 122456899999999999999999999999999999999999
Q ss_pred CCCCCCCCCCccHhhhhhHh--cCccccccc-Cccc-------ccc---------------cCCCchhHHHHHHHHHHHh
Q 039720 885 RPTDNMFNDGLTLHGYAKMA--LPKKVMGIV-DPSL-------LME---------------ARGPSKFEECLVAVVRTGV 939 (973)
Q Consensus 885 ~Pf~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~-------~~~---------------~~~~~~~~~~~~~l~~li~ 939 (973)
.||....... .+....... .+....... .... +.. .........+...+.+++.
T Consensus 237 ~pf~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 315 (355)
T 2eu9_A 237 TLFQTHENRE-HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMR 315 (355)
T ss_dssp CSCCCSSHHH-HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHH
T ss_pred CCCCCCCHHH-HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHH
Confidence 9998643321 111111111 111000000 0000 000 0000111234567889999
Q ss_pred hcCCCCCCCCCCHHHHHHH
Q 039720 940 ACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 940 ~cl~~dP~~RPs~~evl~~ 958 (973)
+||+.||++|||++|+++.
T Consensus 316 ~~L~~dP~~Rpt~~e~l~h 334 (355)
T 2eu9_A 316 RMLEFDPAQRITLAEALLH 334 (355)
T ss_dssp HHTCSSTTTSCCHHHHTTS
T ss_pred HHhcCChhhCcCHHHHhcC
Confidence 9999999999999999853
No 283
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=3.2e-35 Score=324.87 Aligned_cols=252 Identities=21% Similarity=0.266 Sum_probs=179.6
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccch-h-HHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCce
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKG-A-TKSFVAECEALRNIRHRNLIKIITICSSIDFKGADF 750 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 750 (973)
.++|++.+.||+|+||+||+|++..+|+.||||++...... . .+.+.++..+++.++||||+++++++.. .+.
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~-----~~~ 98 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFIT-----NTD 98 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----SSE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEec-----CCc
Confidence 46799999999999999999999999999999999755332 2 2334455567888899999999998654 478
Q ss_pred EEEEEeeccCCCHHHHhhh-cCCCchhhHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCcEEecCCCcEEEeccccchh
Q 039720 751 KAIVYEYMQYGSVDDWLHH-TNDKLEVGKLNIVIEVASVIEYLHN-HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 828 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~ 828 (973)
.++||||+ ++.+..+... ....++..++.++.|++.||.|||+ . +|+||||||+||+++.++.+||+|||++..
T Consensus 99 ~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~ 174 (318)
T 2dyl_A 99 VFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGR 174 (318)
T ss_dssp EEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC--
T ss_pred EEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchh
Confidence 99999999 5566665543 4556778889999999999999998 5 899999999999999999999999999976
Q ss_pred ccCCCCccCCCCCcccccccccccccCccccc-----CCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhH
Q 039720 829 LSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGM-----GGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKM 903 (973)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~ 903 (973)
.... .......||+.|+|||++. ...++.++|||||||++|+|++|+.||.........+......
T Consensus 175 ~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 245 (318)
T 2dyl_A 175 LVDD---------KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQE 245 (318)
T ss_dssp ---------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHS
T ss_pred ccCC---------ccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhcc
Confidence 5432 1222446899999999984 5578899999999999999999999997543221111111110
Q ss_pred hcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 904 ALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
. .+... ....++..+.+++.+||+.||++||+++|+++.
T Consensus 246 ~---------~~~~~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 246 E---------PPLLP-------GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp C---------CCCCC-------SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred C---------CCCCC-------ccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0 00000 001233467789999999999999999999863
No 284
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=7.4e-35 Score=335.44 Aligned_cols=252 Identities=22% Similarity=0.257 Sum_probs=184.8
Q ss_pred hcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhc-CCCCceeEEeEeeecccCCCceEE
Q 039720 674 KEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNI-RHRNLIKIITICSSIDFKGADFKA 752 (973)
Q Consensus 674 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~ 752 (973)
+.|.+.+.||+|+||+||.+.. .+|+.||||++..+ ..+.+.+|+++++++ +||||+++++++. +....+
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~-~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~-----~~~~~~ 85 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGS-FQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSET-----TDRFLY 85 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEE-SSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEE-----CSSEEE
T ss_pred heeeccCeEeeCCCeEEEEEEE-ECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEe-----cCCeEE
Confidence 4566678899999999987644 58999999998643 245678899999876 8999999998854 347899
Q ss_pred EEEeeccCCCHHHHhhhcCCCc-------hhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCC----------
Q 039720 753 IVYEYMQYGSVDDWLHHTNDKL-------EVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHD---------- 815 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~~~~~-------~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~---------- 815 (973)
+||||+. |+|.+++....... +..++.++.||+.||+|||++ +|+||||||+|||++.+
T Consensus 86 lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~ 161 (434)
T 2rio_A 86 IALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTG 161 (434)
T ss_dssp EEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTC
T ss_pred EEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccC
Confidence 9999996 69999998654332 234578999999999999999 99999999999999754
Q ss_pred ---CcEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccC-------CCCCcccchHHHHHHHHHHHh-CC
Q 039720 816 ---MVAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMG-------GDLSMTGDVYSFGILLLEMFT-RR 884 (973)
Q Consensus 816 ---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwSlG~ll~ellt-g~ 884 (973)
+.+||+|||+++....... ..........||+.|+|||++.+ ..++.++|||||||++|||++ |+
T Consensus 162 ~~~~~~kL~DFG~a~~~~~~~~----~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~ 237 (434)
T 2rio_A 162 AENLRILISDFGLCKKLDSGQS----SFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGK 237 (434)
T ss_dssp CCSCEEEECCCTTCEECCC------------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSC
T ss_pred CCceEEEEcccccceecCCCCc----cceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCC
Confidence 4899999999987654220 00111234579999999999875 678999999999999999999 99
Q ss_pred CCCCCCCCCCccHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 039720 885 RPTDNMFNDGLTLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVK 957 (973)
Q Consensus 885 ~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 957 (973)
.||......... ..... .... .............+.+++.+||+.||++|||+.|+++
T Consensus 238 ~Pf~~~~~~~~~---i~~~~--------~~~~----~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 238 HPFGDKYSRESN---IIRGI--------FSLD----EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp CTTCSTTTHHHH---HHHTC--------CCCC----CCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCCCchhhHHH---HhcCC--------CCcc----cccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 999754332111 11100 0000 0001112455677889999999999999999999986
No 285
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.4e-34 Score=347.56 Aligned_cols=314 Identities=21% Similarity=0.226 Sum_probs=228.3
Q ss_pred CCccceeccCCCCccccCCccccCCCCCcEEEccCCccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEE
Q 039720 205 LRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWL 284 (973)
Q Consensus 205 L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 284 (973)
+.+++.|++++|.+.. +|..++.++++|++|+|++|.|++..|..|.++++|++|
T Consensus 50 l~~l~~l~l~~~~l~~-------------------------lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 104 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRK-------------------------LPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKL 104 (597)
T ss_dssp GCCCSEEEESSCEESE-------------------------ECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCCCCC-------------------------cCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEE
Confidence 4566677777776653 444444455666666666666666666666666677777
Q ss_pred EccCCcccccCcccccCcccccceecccccCCCCCCCChhhhhhhcccccceeeccccccccCCCChhhhhhhhhhhHhh
Q 039720 285 ELNENHFSGQVRINFNSLPNLSKLYLGRNNLGTRTSTDLDFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIA 364 (973)
Q Consensus 285 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~ 364 (973)
+|++|.|++..+..|.++++|++|+|++|.|+.+
T Consensus 105 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l---------------------------------------------- 138 (597)
T 3oja_B 105 YMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSL---------------------------------------------- 138 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC----------------------------------------------
T ss_pred ECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCC----------------------------------------------
Confidence 7777776666666666666666666666655431
Q ss_pred hcCCccccCCCccccCCCCcCEEEcccccCCCCCCccccCCCCCCeEEccCcccCCCCCCccCCcCccceEEcCCCcccc
Q 039720 365 MAGNQISGTIPPEIRNLFNLNGLGLEYNQLTGTIPPAIGELRNLQYLGLVGNNIRGIIPDPIGNLTLLNVLQLGFNKLQG 444 (973)
Q Consensus 365 l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 444 (973)
.+..|+.+++|++|+|++|.+++..|..|..+++|++|+|++|.+++. .+..+++|+.|++++|.+++
T Consensus 139 ---------~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~l~~L~~L~l~~n~l~~ 206 (597)
T 3oja_B 139 ---------PRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST 206 (597)
T ss_dssp ---------CTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC---CGGGCTTCSEEECCSSCCSE
T ss_pred ---------CHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc---ChhhhhhhhhhhcccCcccc
Confidence 222345556666666666666666666666666666666666666643 24455666666666666653
Q ss_pred ccccccccccccccccccCcccccCCCccccccccccceeeccCCcccccCCcccccccccceeccccCccccccccccc
Q 039720 445 SIPSYLGKCQNLMQLSAPNNKLNGTLPPQIFGITTLSKLLDLSENHLSGSIPLEVGNLKSLVQLDISRNNFSNEIPVTLS 524 (973)
Q Consensus 445 ~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~ 524 (973)
+...++|+.|++++|.+. .+|..+. ..++.|+|++|.+++ +..++.+++|+.|+|++|.+++..|..|+
T Consensus 207 -----l~~~~~L~~L~ls~n~l~-~~~~~~~---~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~ 275 (597)
T 3oja_B 207 -----LAIPIAVEELDASHNSIN-VVRGPVN---VELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFV 275 (597)
T ss_dssp -----EECCTTCSEEECCSSCCC-EEECSCC---SCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGT
T ss_pred -----ccCCchhheeeccCCccc-ccccccC---CCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhc
Confidence 223346677777777766 3333322 233588888888885 46789999999999999999999999999
Q ss_pred CccchhhhcccCcccccccccchhhhccCCeecCCCCccccccCCCCCCCCccceEeccCCcCcCcCCCCCCCCCccccc
Q 039720 525 ACTTLEYLLMQGNSFNGSIPQSLNALKSIKELDLSCNNLSGQIPIHLGNLPFLEYLNLSYNHFEGKVPKKGVFSNETRIS 604 (973)
Q Consensus 525 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~l~ 604 (973)
++++|+.|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|++++..+ ..+++++.++
T Consensus 276 ~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~~--~~~~~L~~L~ 351 (597)
T 3oja_B 276 KMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKL--STHHTLKNLT 351 (597)
T ss_dssp TCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCC--CTTCCCSEEE
T ss_pred CccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcCh--hhcCCCCEEE
Confidence 99999999999999995 6778888999999999999999 788889999999999999999998753 4588999999
Q ss_pred cccCccccCCCC
Q 039720 605 LTGNEQFCGGLG 616 (973)
Q Consensus 605 ~~~N~~~cg~~~ 616 (973)
+.+|||.|.+..
T Consensus 352 l~~N~~~~~~~~ 363 (597)
T 3oja_B 352 LSHNDWDCNSLR 363 (597)
T ss_dssp CCSSCEEHHHHH
T ss_pred eeCCCCCChhHH
Confidence 999999998653
No 286
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.5e-34 Score=313.50 Aligned_cols=233 Identities=10% Similarity=0.059 Sum_probs=184.5
Q ss_pred hcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccc---hhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCce
Q 039720 674 KEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKK---GATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADF 750 (973)
Q Consensus 674 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 750 (973)
++|++.+.||+|+||+||+|++..+++.||||+++.... ...+.+.+|+.+++.++||||+++++++.. .+.
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-----~~~ 105 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHT-----RAG 105 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-----TTE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEE-----CCc
Confidence 579999999999999999999998999999999975532 334778999999999999999999998755 378
Q ss_pred EEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhcc
Q 039720 751 KAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLS 830 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~ 830 (973)
.++||||+++++|.+++... ....++.+++.|++.||+|||++ +|+||||||+||+++.++.+||++++
T Consensus 106 ~~lv~e~~~g~~L~~~l~~~--~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~------ 174 (286)
T 3uqc_A 106 GLVVAEWIRGGSLQEVADTS--PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA------ 174 (286)
T ss_dssp EEEEEECCCEEEHHHHHTTC--CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC------
T ss_pred EEEEEEecCCCCHHHHHhcC--CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc------
Confidence 99999999999999999653 34556889999999999999999 99999999999999999999997443
Q ss_pred CCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCcccc
Q 039720 831 HHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKVM 910 (973)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
|++ +++.++|||||||++|||++|+.||............ .
T Consensus 175 ----------------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~----------~ 215 (286)
T 3uqc_A 175 ----------------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA----------E 215 (286)
T ss_dssp ----------------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC----------C
T ss_pred ----------------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH----------H
Confidence 222 2678999999999999999999999865432110000 0
Q ss_pred cccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHhcccc
Q 039720 911 GIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVKKLCAVGEI 965 (973)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 965 (973)
.......... ......++..+.+++.+||+.||++| |++|+++.|+++...
T Consensus 216 ~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~ 266 (286)
T 3uqc_A 216 RDTAGQPIEP---ADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAV 266 (286)
T ss_dssp BCTTSCBCCH---HHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred HHhccCCCCh---hhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence 0000000000 01112344567899999999999999 999999999998643
No 287
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.8e-33 Score=314.88 Aligned_cols=306 Identities=22% Similarity=0.349 Sum_probs=179.7
Q ss_pred cCCCCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccce
Q 039720 83 GNLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIER 162 (973)
Q Consensus 83 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~ 162 (973)
..+++|++|++++|.++ .+| .+..+++|++|+|++|.+++ +|. +..+++|++|++++|.+.+. + .+..+++|++
T Consensus 41 ~~l~~L~~L~l~~~~i~-~~~-~~~~~~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~~~-~-~~~~l~~L~~ 114 (347)
T 4fmz_A 41 EELESITKLVVAGEKVA-SIQ-GIEYLTNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKITDI-S-ALQNLTNLRE 114 (347)
T ss_dssp HHHTTCSEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCC-G-GGTTCTTCSE
T ss_pred hhcccccEEEEeCCccc-cch-hhhhcCCccEEEccCCcccc-chh-hhcCCcCCEEEccCCcccCc-h-HHcCCCcCCE
Confidence 35667777777777776 344 36777777777777777763 333 66666666666666655542 2 3556666666
Q ss_pred eeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccCCcc
Q 039720 163 LSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRF 242 (973)
Q Consensus 163 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 242 (973)
|++++|.+++ +|. +..+++|++|++++|.....+ ..+..+++|++|++++|.+.+..+ +..+++|++|++++|++
T Consensus 115 L~l~~n~i~~-~~~-~~~l~~L~~L~l~~n~~~~~~-~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l 189 (347)
T 4fmz_A 115 LYLNEDNISD-ISP-LANLTKMYSLNLGANHNLSDL-SPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQI 189 (347)
T ss_dssp EECTTSCCCC-CGG-GTTCTTCCEEECTTCTTCCCC-GGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCC
T ss_pred EECcCCcccC-chh-hccCCceeEEECCCCCCcccc-cchhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcc
Confidence 6666666653 222 566666666666666544332 236666666666666666654333 45555555555555555
Q ss_pred ccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceecccccCCCCCCCC
Q 039720 243 KGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNLGTRTSTD 322 (973)
Q Consensus 243 ~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 322 (973)
. .++. +..+++|+.|++++|.+++..+ +..+++|++|+|++|++++..+ +..+++|++|++++|.++.+
T Consensus 190 ~-~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~---- 258 (347)
T 4fmz_A 190 E-DISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI---- 258 (347)
T ss_dssp C-CCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC----
T ss_pred c-cccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC----
Confidence 4 2332 2245555555555555554322 5555555555555555554333 44555555555555544321
Q ss_pred hhhhhhhcccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCccccCCCccccCCCCcCEEEcccccCCCCCCccc
Q 039720 323 LDFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEIRNLFNLNGLGLEYNQLTGTIPPAI 402 (973)
Q Consensus 323 ~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 402 (973)
+.+..+++|+.|++++|++++. ..+
T Consensus 259 -----------------------------------------------------~~~~~l~~L~~L~l~~n~l~~~--~~~ 283 (347)
T 4fmz_A 259 -----------------------------------------------------NAVKDLTKLKMLNVGSNQISDI--SVL 283 (347)
T ss_dssp -----------------------------------------------------GGGTTCTTCCEEECCSSCCCCC--GGG
T ss_pred -----------------------------------------------------hhHhcCCCcCEEEccCCccCCC--hhh
Confidence 2345556677777777777643 456
Q ss_pred cCCCCCCeEEccCcccCCCCCCccCCcCccceEEcCCCccccccccccccccccccccccCcccc
Q 039720 403 GELRNLQYLGLVGNNIRGIIPDPIGNLTLLNVLQLGFNKLQGSIPSYLGKCQNLMQLSAPNNKLN 467 (973)
Q Consensus 403 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 467 (973)
..+++|++|++++|++.+..|..+..+++|++|++++|++++..| +..+++|+.|++++|.|+
T Consensus 284 ~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 284 NNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp GGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred cCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 667777777777777776666667777777777777777775545 666777777777777664
No 288
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.6e-34 Score=328.55 Aligned_cols=249 Identities=22% Similarity=0.296 Sum_probs=182.8
Q ss_pred hcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhc-CCCCceeEEeEeeecccCCCceEE
Q 039720 674 KEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNI-RHRNLIKIITICSSIDFKGADFKA 752 (973)
Q Consensus 674 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~ 752 (973)
.+|.+.+.||+|+||+||.... .+++.||||++..... ..+.+|+++++.+ +||||+++++++.. ....+
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~-~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~-----~~~~~ 94 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGM-FDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKD-----RQFQY 94 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEE-SSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEE-----TTEEE
T ss_pred EEEecCCeeecCcCEEEEEEEE-eCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEec-----CCEEE
Confidence 4688899999999999664333 4899999999964432 2356799999999 79999999998654 47889
Q ss_pred EEEeeccCCCHHHHhhhcC-CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecC---C--CcEEEeccccc
Q 039720 753 IVYEYMQYGSVDDWLHHTN-DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDH---D--MVAHVSDFGLA 826 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~---~--~~~kl~Dfg~a 826 (973)
+||||+. |+|.+++.... ...+..++.++.||+.||+|||+. +|+||||||+||+++. + ..+||+|||+|
T Consensus 95 lv~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a 170 (432)
T 3p23_A 95 IAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLC 170 (432)
T ss_dssp EEEECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEE
T ss_pred EEEECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccce
Confidence 9999997 59999987654 334556789999999999999999 9999999999999953 2 36889999999
Q ss_pred hhccCCCCccCCCCCcccccccccccccCccccc---CCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCccHhhhhh
Q 039720 827 RFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGM---GGDLSMTGDVYSFGILLLEMFT-RRRPTDNMFNDGLTLHGYAK 902 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlG~ll~ellt-g~~Pf~~~~~~~~~~~~~~~ 902 (973)
+...... ..........||+.|+|||++. ...++.++|||||||++|||++ |..||........ .
T Consensus 171 ~~~~~~~-----~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~------~ 239 (432)
T 3p23_A 171 KKLAVGR-----HSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA------N 239 (432)
T ss_dssp ECC-----------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH------H
T ss_pred eeccCCC-----cceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH------H
Confidence 8664321 0112233457999999999987 4567889999999999999999 9999964322110 1
Q ss_pred HhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 039720 903 MALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERMQMTAVVK 957 (973)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 957 (973)
....... . .. ..........+.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~~~~-----~----~~--~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 240 ILLGACS-----L----DC--LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp HHTTCCC-----C----TT--SCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHhccCC-----c----cc--cCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 1000000 0 00 0111234455678999999999999999999984
No 289
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=4.3e-33 Score=309.61 Aligned_cols=218 Identities=22% Similarity=0.309 Sum_probs=131.4
Q ss_pred CCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccceeecc
Q 039720 87 FLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLY 166 (973)
Q Consensus 87 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~ 166 (973)
+++.+++++|.++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|++++|++.+..|..+.++++|++|+|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 3455555555555 4555442 456666666666654445555555555555555555555556666667777777777
Q ss_pred CCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCcc--ccCCccccCCCCCcEEEccCCcccc
Q 039720 167 GNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFS--GMFPLSVCNISSLDEAYLFKNRFKG 244 (973)
Q Consensus 167 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~ 244 (973)
+|+++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|.++ +..|..+..+ +|++|++++|+++
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~- 185 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLT- 185 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCS-
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCC-
Confidence 77777 5666554 67888888888887655666788888888888888875 3556666655 6666666666665
Q ss_pred CCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceecccccC
Q 039720 245 SLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNL 315 (973)
Q Consensus 245 ~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 315 (973)
.+|..++ ++|++|++++|.+++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|++
T Consensus 186 ~l~~~~~---~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 253 (332)
T 2ft3_A 186 GIPKDLP---ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKL 253 (332)
T ss_dssp SCCSSSC---SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCC
T ss_pred ccCcccc---CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcC
Confidence 3554432 4555555555555554445555555555555555555544444444444444444444433
No 290
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=6.4e-33 Score=310.48 Aligned_cols=305 Identities=26% Similarity=0.413 Sum_probs=147.3
Q ss_pred cccccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEE
Q 039720 156 NWLKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEA 235 (973)
Q Consensus 156 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 235 (973)
.+++|++|++++|.++ .+| .+..+++|++|++++|++++ ++. +.++++|++|++++|.+++. .++.
T Consensus 42 ~l~~L~~L~l~~~~i~-~~~-~~~~~~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~~~--~~~~-------- 107 (347)
T 4fmz_A 42 ELESITKLVVAGEKVA-SIQ-GIEYLTNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKITDI--SALQ-------- 107 (347)
T ss_dssp HHTTCSEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCC--GGGT--------
T ss_pred hcccccEEEEeCCccc-cch-hhhhcCCccEEEccCCcccc-chh-hhcCCcCCEEEccCCcccCc--hHHc--------
Confidence 3445555555555554 233 25555555555555555552 222 55555555555555555431 1334
Q ss_pred EccCCccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceecccccC
Q 039720 236 YLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNL 315 (973)
Q Consensus 236 ~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 315 (973)
++++|++|++++|.+++..+ +..+++|++|++++|......+ .+..+++|++|++++|.+
T Consensus 108 -----------------~l~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~ 167 (347)
T 4fmz_A 108 -----------------NLTNLRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKV 167 (347)
T ss_dssp -----------------TCTTCSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCC
T ss_pred -----------------CCCcCCEEECcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCc
Confidence 44555555555555553222 5555555555555554332222 255555555555555544
Q ss_pred CCCCCCChhhhhhhcccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCccccCCCccccCCCCcCEEEcccccCC
Q 039720 316 GTRTSTDLDFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEIRNLFNLNGLGLEYNQLT 395 (973)
Q Consensus 316 ~~~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 395 (973)
..+. .+..+++|+.|++++|.++
T Consensus 168 ~~~~---------------------------------------------------------~~~~l~~L~~L~l~~n~l~ 190 (347)
T 4fmz_A 168 KDVT---------------------------------------------------------PIANLTDLYSLSLNYNQIE 190 (347)
T ss_dssp CCCG---------------------------------------------------------GGGGCTTCSEEECTTSCCC
T ss_pred CCch---------------------------------------------------------hhccCCCCCEEEccCCccc
Confidence 3211 0233344444444444444
Q ss_pred CCCCccccCCCCCCeEEccCcccCCCCCCccCCcCccceEEcCCCccccccccccccccccccccccCcccccCCCcccc
Q 039720 396 GTIPPAIGELRNLQYLGLVGNNIRGIIPDPIGNLTLLNVLQLGFNKLQGSIPSYLGKCQNLMQLSAPNNKLNGTLPPQIF 475 (973)
Q Consensus 396 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 475 (973)
+..+ +..+++|+.|++++|.+.+..+ +..+++|++|++++|++++..+ +..+++|++|++++|.+.+ +
T Consensus 191 ~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~----- 258 (347)
T 4fmz_A 191 DISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISD-I----- 258 (347)
T ss_dssp CCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-C-----
T ss_pred cccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCC-C-----
Confidence 2221 4444555555555555543322 4445555555555555553222 4445555544444444431 1
Q ss_pred ccccccceeeccCCcccccCCcccccccccceeccccCcccccccccccCccchhhhcccCcccccccccchhhhccCCe
Q 039720 476 GITTLSKLLDLSENHLSGSIPLEVGNLKSLVQLDISRNNFSNEIPVTLSACTTLEYLLMQGNSFNGSIPQSLNALKSIKE 555 (973)
Q Consensus 476 ~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 555 (973)
..+..+++|+.|++++|++++. ..+..+++|+.|++++|++++..|..+..+++|++
T Consensus 259 ---------------------~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 315 (347)
T 4fmz_A 259 ---------------------NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTT 315 (347)
T ss_dssp ---------------------GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSE
T ss_pred ---------------------hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCE
Confidence 1223344555555555555532 23455555555555555555555555556666666
Q ss_pred ecCCCCccccccCCCCCCCCccceEeccCCcCc
Q 039720 556 LDLSCNNLSGQIPIHLGNLPFLEYLNLSYNHFE 588 (973)
Q Consensus 556 L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 588 (973)
|+|++|++++..| +..+++|+.|++++|+++
T Consensus 316 L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 316 LFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp EECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred EEccCCccccccC--hhhhhccceeehhhhccc
Confidence 6666666654433 555666666666666554
No 291
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.4e-34 Score=347.24 Aligned_cols=244 Identities=21% Similarity=0.308 Sum_probs=195.1
Q ss_pred hcCCcCCccccccceeEEEEEECC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCCceE
Q 039720 674 KEFSSSNRIGKGSFGFVYKGNLGE-DGMSVAVKVMNLDK-KGATKSFVAECEALRNIRHRNLIKIITICSSIDFKGADFK 751 (973)
Q Consensus 674 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 751 (973)
++|++.+.||+|+||+||+|++.. +|+.||||++.... ......+.+|++++++++||||+++++++......+....
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 689999999999999999999976 78999999986443 3345678899999999999999999999876533233347
Q ss_pred EEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhccC
Q 039720 752 AIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLSH 831 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~~ 831 (973)
++||||+++++|.+++.. .+++.+++.++.||+.||.|||++ +|+||||||+|||++.+ .+||+|||+++....
T Consensus 160 ~lv~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~ 233 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS 233 (681)
T ss_dssp EEEEECCCCEECC----C--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEETTC
T ss_pred EEEEEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchhccc
Confidence 999999999999988765 577888999999999999999999 99999999999999885 899999999986532
Q ss_pred CCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCccccc
Q 039720 832 HPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKVMG 911 (973)
Q Consensus 832 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
. ....||+.|+|||++.+.. +.++|||||||++|+|++|..||........
T Consensus 234 ~------------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~---------------- 284 (681)
T 2pzi_A 234 F------------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGL---------------- 284 (681)
T ss_dssp C------------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSC----------------
T ss_pred C------------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccccc----------------
Confidence 1 2456999999999987654 8899999999999999999988764221100
Q ss_pred ccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCC-CHHHHHHHHHhc
Q 039720 912 IVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERM-QMTAVVKKLCAV 962 (973)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~ 962 (973)
. ...........+.+++.+||+.||++|| +++++.+.+.++
T Consensus 285 -~---------~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 285 -P---------EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp -C---------TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred -c---------ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 0 0111223446788999999999999999 566677766654
No 292
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=2.4e-33 Score=306.77 Aligned_cols=233 Identities=19% Similarity=0.291 Sum_probs=180.7
Q ss_pred hcCCcC-CccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHH-HhcCCCCceeEEeEeeecccCCCceE
Q 039720 674 KEFSSS-NRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEAL-RNIRHRNLIKIITICSSIDFKGADFK 751 (973)
Q Consensus 674 ~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~~~~~~~~~~~~~~~~~ 751 (973)
++|.+. +.||+|+||+||+|++..+++.||+|+++.. ..+.+|+.++ +..+||||+++++++... .......
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~-~~~~~~~ 90 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENL-YAGRKCL 90 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhh-cCCCceE
Confidence 567777 7799999999999999999999999999632 3466788887 666899999999987652 3345778
Q ss_pred EEEEeeccCCCHHHHhhhcC--CCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecC---CCcEEEeccccc
Q 039720 752 AIVYEYMQYGSVDDWLHHTN--DKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDH---DMVAHVSDFGLA 826 (973)
Q Consensus 752 ~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~---~~~~kl~Dfg~a 826 (973)
++||||+++|+|.+++.... ..++..++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 99999999999999998754 467888999999999999999999 9999999999999998 789999999998
Q ss_pred hhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcC
Q 039720 827 RFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALP 906 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 906 (973)
.... +..++.++||||+||++|||++|+.||.........
T Consensus 168 ~~~~------------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~---------- 207 (299)
T 3m2w_A 168 KETT------------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS---------- 207 (299)
T ss_dssp EECT------------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-----------------
T ss_pred cccc------------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh----------
Confidence 6431 134577999999999999999999999754322100
Q ss_pred cccccccCcccccccCCC-chhHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 039720 907 KKVMGIVDPSLLMEARGP-SKFEECLVAVVRTGVACSMESPSERMQMTAVVKK 958 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 958 (973)
......+.. .....+ .....++..+.+++.+||+.||++|||++|+++.
T Consensus 208 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 208 PGMKTRIRM---GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp CCSCCSSCT---TCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHhh---ccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 000000000 000001 1112345678899999999999999999999984
No 293
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.3e-32 Score=305.60 Aligned_cols=200 Identities=24% Similarity=0.286 Sum_probs=138.4
Q ss_pred CCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccceeec
Q 039720 86 SFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSL 165 (973)
Q Consensus 86 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L 165 (973)
+.|++|+|++|++++..+..|+++++|++|+|++|.+++..|..|++ +++|++|+|
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~------------------------l~~L~~L~L 107 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAP------------------------LVKLERLYL 107 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTT------------------------CTTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcC------------------------CCCCCEEEC
Confidence 46677777777777555556777777777777777776554555544 455666666
Q ss_pred cCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccc--cCCccccCCCCCcEEEccCCccc
Q 039720 166 YGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSG--MFPLSVCNISSLDEAYLFKNRFK 243 (973)
Q Consensus 166 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~ 243 (973)
++|+++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|.+.. ..+..+.++++|++|++++|+++
T Consensus 108 s~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~ 184 (330)
T 1xku_A 108 SKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT 184 (330)
T ss_dssp CSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC
T ss_pred CCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc
Confidence 666666 4555554 677888888888876666677788888888888887753 56667777777777777777776
Q ss_pred cCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceecccccCC
Q 039720 244 GSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNLG 316 (973)
Q Consensus 244 ~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 316 (973)
.+|..++ ++|++|++++|.+++..|..|.++++|++|+|++|++++..+..|..+++|++|+|++|+++
T Consensus 185 -~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 253 (330)
T 1xku_A 185 -TIPQGLP---PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV 253 (330)
T ss_dssp -SCCSSCC---TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS
T ss_pred -cCCcccc---ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc
Confidence 5665543 67777777777777777777777777777777777777666666666666666666666553
No 294
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.8e-32 Score=303.01 Aligned_cols=295 Identities=20% Similarity=0.218 Sum_probs=210.8
Q ss_pred cccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEc
Q 039720 158 LKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYL 237 (973)
Q Consensus 158 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 237 (973)
.+++.+++++|.++ .+|..+. ++|++|++++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 33 c~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 109 (332)
T 2ft3_A 33 CHLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYI 109 (332)
T ss_dssp EETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEEC
T ss_pred ccCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEEC
Confidence 46888999999988 6787764 68999999999998777888999999999999999999888889999999999999
Q ss_pred cCCccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCccc--ccCcccccCcccccceecccccC
Q 039720 238 FKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFS--GQVRINFNSLPNLSKLYLGRNNL 315 (973)
Q Consensus 238 ~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~~~~~~~l~~L~~L~L~~N~l 315 (973)
++|+++ .+|..++ ++|++|++++|.+++..+..|.++++|++|++++|.++ +..+..|..+ +|++|++++|++
T Consensus 110 ~~n~l~-~l~~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l 184 (332)
T 2ft3_A 110 SKNHLV-EIPPNLP---SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKL 184 (332)
T ss_dssp CSSCCC-SCCSSCC---TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBC
T ss_pred CCCcCC-ccCcccc---ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCC
Confidence 999998 7887765 78999999999999877778999999999999999986 3667778777 888888888877
Q ss_pred CCCCCCChhhhhhhcccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCccccCCCccccCCCCcCEEEcccccCC
Q 039720 316 GTRTSTDLDFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEIRNLFNLNGLGLEYNQLT 395 (973)
Q Consensus 316 ~~~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 395 (973)
+.++.. +. ++|++|+|++|+++
T Consensus 185 ~~l~~~--------------------------------------------------------~~--~~L~~L~l~~n~i~ 206 (332)
T 2ft3_A 185 TGIPKD--------------------------------------------------------LP--ETLNELHLDHNKIQ 206 (332)
T ss_dssp SSCCSS--------------------------------------------------------SC--SSCSCCBCCSSCCC
T ss_pred CccCcc--------------------------------------------------------cc--CCCCEEECCCCcCC
Confidence 643221 11 35666666666666
Q ss_pred CCCCccccCCCCCCeEEccCcccCCCCCCccCCcCccceEEcCCCccccccccccccccccccccccCcccccCCCcccc
Q 039720 396 GTIPPAIGELRNLQYLGLVGNNIRGIIPDPIGNLTLLNVLQLGFNKLQGSIPSYLGKCQNLMQLSAPNNKLNGTLPPQIF 475 (973)
Q Consensus 396 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 475 (973)
+..+..|..+++|++|+|++|++++..+..+..+++|++|++++|+++ .+|..+..+++|+.|++++|+++ .+|...+
T Consensus 207 ~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~-~~~~~~~ 284 (332)
T 2ft3_A 207 AIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNIT-KVGVNDF 284 (332)
T ss_dssp CCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCC-BCCTTSS
T ss_pred ccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCC-ccChhHc
Confidence 665666666666666666666666665666666666666666666666 56666666666666666666666 3333222
Q ss_pred ccccccceeeccCCcccccCCcccccccccceeccccCccc--ccccccccCccchhhhcccCcc
Q 039720 476 GITTLSKLLDLSENHLSGSIPLEVGNLKSLVQLDISRNNFS--NEIPVTLSACTTLEYLLMQGNS 538 (973)
Q Consensus 476 ~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~--~~~p~~~~~l~~L~~L~L~~N~ 538 (973)
..... -....+|+.|++++|.+. +..|..|..+++|+.|++++|+
T Consensus 285 ~~~~~------------------~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 285 CPVGF------------------GVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp SCSSC------------------CSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ccccc------------------ccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 11000 001244566666666665 4555666666666666666653
No 295
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=9.7e-34 Score=323.90 Aligned_cols=245 Identities=16% Similarity=0.170 Sum_probs=177.4
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccc---hhHHHHHHHHHHHHhcCC-CCcee-------------
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKK---GATKSFVAECEALRNIRH-RNLIK------------- 735 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h-~niv~------------- 735 (973)
...|+..+.||+|+||+||+|++..+|+.||||+++.... ...+.+.+|+.+++.+.| ++...
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 3468888999999999999999999999999999974332 235778999999999977 22111
Q ss_pred --------EEeEeeecccCCCceEEEEEeeccCCCHHHHhhh-------cCCCchhhHHHHHHHHHHHHHHHHhcCCCCe
Q 039720 736 --------IITICSSIDFKGADFKAIVYEYMQYGSVDDWLHH-------TNDKLEVGKLNIVIEVASVIEYLHNHCQPPI 800 (973)
Q Consensus 736 --------~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~-------~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~i 800 (973)
++.+............+++|+++ +++|.+++.. .....+..+..++.|++.||+|||++ +|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 11111100000123356666655 6899988842 11234466788899999999999999 99
Q ss_pred EecCCCCCcEEecCCCcEEEeccccchhccCCCCccCCCCCcccccccccccccCcccc----------cCCCCCcccch
Q 039720 801 VHGDLKPSNVLLDHDMVAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYG----------MGGDLSMTGDV 870 (973)
Q Consensus 801 vHrDik~~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~sDv 870 (973)
+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++ .+..++.++||
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~-----------~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~Dv 300 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----------SAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDT 300 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTE-----------EECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCC-----------ccccCCC-CceeCchhhhccccccccccCcCCCchhhH
Confidence 9999999999999999999999999875432 1334567 899999998 66678999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCccHhhhhhHhcCcccccccCcccccccCCCchhHHHHHHHHHHHhhcCCCCCCCCC
Q 039720 871 YSFGILLLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKVMGIVDPSLLMEARGPSKFEECLVAVVRTGVACSMESPSERM 950 (973)
Q Consensus 871 wSlG~ll~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 950 (973)
|||||++|||++|+.||........ ...++. .. . ..+..+.+++.+||+.||++||
T Consensus 301 wSlGvil~elltg~~Pf~~~~~~~~-------------~~~~~~-----~~--~----~~~~~~~~li~~~l~~dP~~Rp 356 (413)
T 3dzo_A 301 WTLGLAIYWIWCADLPNTDDAALGG-------------SEWIFR-----SC--K----NIPQPVRALLEGFLRYPKEDRL 356 (413)
T ss_dssp HHHHHHHHHHHHSSCCCCTTGGGSC-------------SGGGGS-----SC--C----CCCHHHHHHHHHHTCSSGGGSC
T ss_pred HHHHHHHHHHHHCCCCCCCcchhhh-------------HHHHHh-----hc--c----cCCHHHHHHHHHHccCChhhCc
Confidence 9999999999999999975432211 000000 00 0 1235677899999999999999
Q ss_pred CHHHHHH
Q 039720 951 QMTAVVK 957 (973)
Q Consensus 951 s~~evl~ 957 (973)
++.|+++
T Consensus 357 t~~~~l~ 363 (413)
T 3dzo_A 357 LPLQAME 363 (413)
T ss_dssp CHHHHTT
T ss_pred CHHHHHh
Confidence 9766643
No 296
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=6.2e-32 Score=300.06 Aligned_cols=296 Identities=21% Similarity=0.244 Sum_probs=218.8
Q ss_pred cccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEc
Q 039720 158 LKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYL 237 (973)
Q Consensus 158 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 237 (973)
.+++.++++++.++ .+|..+. ++|++|+|++|++++..+..|+++++|++|+|++|.+++..|..|.++++|++|++
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 46888999998888 5777665 68899999999999777778999999999999999999888999999999999999
Q ss_pred cCCccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccc--cCcccccCcccccceecccccC
Q 039720 238 FKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSG--QVRINFNSLPNLSKLYLGRNNL 315 (973)
Q Consensus 238 ~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~L~~N~l 315 (973)
++|+++ .+|..++ ++|++|++++|.+++..+..|.++++|++|++++|+++. ..+..|..+++|++|++++|.+
T Consensus 108 s~n~l~-~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l 183 (330)
T 1xku_A 108 SKNQLK-ELPEKMP---KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNI 183 (330)
T ss_dssp CSSCCS-BCCSSCC---TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCC
T ss_pred CCCcCC-ccChhhc---ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcc
Confidence 999998 7887765 789999999999998878889999999999999999864 6677788888888888888877
Q ss_pred CCCCCCChhhhhhhcccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCccccCCCccccCCCCcCEEEcccccCC
Q 039720 316 GTRTSTDLDFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEIRNLFNLNGLGLEYNQLT 395 (973)
Q Consensus 316 ~~~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 395 (973)
+.++. .+. ++|++|+|++|+++
T Consensus 184 ~~l~~--------------------------------------------------------~~~--~~L~~L~l~~n~l~ 205 (330)
T 1xku_A 184 TTIPQ--------------------------------------------------------GLP--PSLTELHLDGNKIT 205 (330)
T ss_dssp CSCCS--------------------------------------------------------SCC--TTCSEEECTTSCCC
T ss_pred ccCCc--------------------------------------------------------ccc--ccCCEEECCCCcCC
Confidence 54322 111 46677777777777
Q ss_pred CCCCccccCCCCCCeEEccCcccCCCCCCccCCcCccceEEcCCCccccccccccccccccccccccCcccccCCCcccc
Q 039720 396 GTIPPAIGELRNLQYLGLVGNNIRGIIPDPIGNLTLLNVLQLGFNKLQGSIPSYLGKCQNLMQLSAPNNKLNGTLPPQIF 475 (973)
Q Consensus 396 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 475 (973)
+..|..|..+++|++|+|++|++++..+..+..+++|++|++++|+++ .+|..+..+++|++|++++|+++ .+|...+
T Consensus 206 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~-~~~~~~f 283 (330)
T 1xku_A 206 KVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNIS-AIGSNDF 283 (330)
T ss_dssp EECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCC-CCCTTSS
T ss_pred ccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCC-ccChhhc
Confidence 666677777777777777777777666666777777777777777777 66666777777777777777776 3443332
Q ss_pred ccccccceeeccCCcccccCCcccccccccceeccccCcccc--cccccccCccchhhhcccCcc
Q 039720 476 GITTLSKLLDLSENHLSGSIPLEVGNLKSLVQLDISRNNFSN--EIPVTLSACTTLEYLLMQGNS 538 (973)
Q Consensus 476 ~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~ 538 (973)
.... .......|+.|++++|.+.. ..|..|..+.+|+.++|++|+
T Consensus 284 ~~~~------------------~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 284 CPPG------------------YNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp SCSS------------------CCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred CCcc------------------cccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 1110 00123456667777776653 455677777777777777774
No 297
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.98 E-value=9.6e-33 Score=307.42 Aligned_cols=247 Identities=16% Similarity=0.162 Sum_probs=188.0
Q ss_pred hhcCCcCCccccccceeEEEEEECCCCcEEEEEEeeccc--------chhHHHHHHHHHHHHhcC---------CCCcee
Q 039720 673 TKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK--------KGATKSFVAECEALRNIR---------HRNLIK 735 (973)
Q Consensus 673 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~---------h~niv~ 735 (973)
.++|++.+.||+|+||+||+|++ +|+.||||+++... ....+.+.+|+.+++.++ |||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 46799999999999999999999 78999999997553 223377889999998885 888888
Q ss_pred EEeEeeec-------------------------ccCCCceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHH
Q 039720 736 IITICSSI-------------------------DFKGADFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIE 790 (973)
Q Consensus 736 ~~~~~~~~-------------------------~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~ 790 (973)
+.+++... ++.+....++||||+++|++.+.+.+ ...++..++.++.||+.||+
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHHHHHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHHHHHHHHHHHHHH
Confidence 88765321 01236789999999999977666654 45678889999999999999
Q ss_pred HHH-hcCCCCeEecCCCCCcEEecCCC--------------------cEEEeccccchhccCCCCccCCCCCcccccccc
Q 039720 791 YLH-NHCQPPIVHGDLKPSNVLLDHDM--------------------VAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKG 849 (973)
Q Consensus 791 ~LH-~~~~~~ivHrDik~~NILl~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~g 849 (973)
||| +. +|+||||||+|||++.++ .+||+|||+|+.... ....|
T Consensus 176 ~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-------------~~~~g 239 (336)
T 2vuw_A 176 VAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-------------GIVVF 239 (336)
T ss_dssp HHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-------------TEEEC
T ss_pred HHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-------------CcEEE
Confidence 999 88 999999999999999887 899999999986532 13479
Q ss_pred cccccCcccccCCCCCcccchHHHHHH-HHHHHhCCCCCCCCCCCCccHhhhhhHhcCcccccccCcccccccCCCchhH
Q 039720 850 TIGYIGPEYGMGGDLSMTGDVYSFGIL-LLEMFTRRRPTDNMFNDGLTLHGYAKMALPKKVMGIVDPSLLMEARGPSKFE 928 (973)
Q Consensus 850 t~~y~aPE~~~~~~~~~~sDvwSlG~l-l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (973)
|+.|+|||++.+.. +.++||||+|++ .+++++|..||... .|..... ..+.. ..............
T Consensus 240 t~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~--------~~~~~~~-~~~~~---~~~~~~~~~~~~~~ 306 (336)
T 2vuw_A 240 CDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV--------LWLHYLT-DKMLK---QMTFKTKCNTPAMK 306 (336)
T ss_dssp CCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH--------HHHHHHH-HHHHH---TCCCSSCCCSHHHH
T ss_pred eecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcch--------hhhhHHH-Hhhhh---hhccCcccchhhhh
Confidence 99999999988776 899999998777 77888899998531 0100000 00000 00000111123345
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 039720 929 ECLVAVVRTGVACSMESPSERMQMTAVV 956 (973)
Q Consensus 929 ~~~~~l~~li~~cl~~dP~~RPs~~evl 956 (973)
.....+.+++.+||+.| |++|++
T Consensus 307 ~~s~~~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 307 QIKRKIQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred hcCHHHHHHHHHHhccC-----CHHHHH
Confidence 67888999999999976 999988
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=7.6e-35 Score=339.62 Aligned_cols=362 Identities=20% Similarity=0.189 Sum_probs=214.8
Q ss_pred cccceeeccCCcccccCCCC-CCCCCcccEEEccCCcCCC----CCCCcccCCCccceeccCCCCccccCCccccCCCCC
Q 039720 158 LKIERLSLYGNQLTGQLPPS-IGNLSALQTFDIAGNKLDG----RIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSL 232 (973)
Q Consensus 158 ~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~L~~N~l~~----~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L 232 (973)
++|++|+|++|+++...... +..+++|++|+|++|+++. .++..+..+++|++|+|++|.+++..
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~---------- 72 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVG---------- 72 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHH----------
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHH----------
Confidence 45666666666665322222 4455666666666666552 23444555566666666666554322
Q ss_pred cEEEccCCccccCCCcccccCCC----CCcEEEccCCcccc----cCCccccCCCCCCEEEccCCcccccCcccc-----
Q 039720 233 DEAYLFKNRFKGSLPVCLGFNLP----KLTVLVVAQNNLTG----FLPQSLSNASKLEWLELNENHFSGQVRINF----- 299 (973)
Q Consensus 233 ~~L~L~~N~l~~~ip~~~~~~l~----~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~----- 299 (973)
+..++..++ +|++|+|++|.|+. .++..+..+++|++|+|++|++++..+..+
T Consensus 73 --------------~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~ 138 (461)
T 1z7x_W 73 --------------VHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLL 138 (461)
T ss_dssp --------------HHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHT
T ss_pred --------------HHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHh
Confidence 222222333 56777777776663 446667777777777777777764433322
Q ss_pred cCcccccceecccccCCCCCCCChhhhhhhcccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCccccCCCcccc
Q 039720 300 NSLPNLSKLYLGRNNLGTRTSTDLDFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEIR 379 (973)
Q Consensus 300 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~ 379 (973)
...++|++|+|++|+++.... ......+..+++|++|++++|.+++..+..+.... ..
T Consensus 139 ~~~~~L~~L~L~~n~l~~~~~--~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l--------------------~~ 196 (461)
T 1z7x_W 139 DPQCRLEKLQLEYCSLSAASC--EPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGL--------------------KD 196 (461)
T ss_dssp STTCCCCEEECTTSCCBGGGH--HHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHH--------------------HH
T ss_pred cCCCcceEEECCCCCCCHHHH--HHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHH--------------------hc
Confidence 234567777777777654221 12234556667777777777766533332222110 01
Q ss_pred CCCCcCEEEcccccCCCC----CCccccCCCCCCeEEccCcccCCCC-----CCccCCcCccceEEcCCCccccc----c
Q 039720 380 NLFNLNGLGLEYNQLTGT----IPPAIGELRNLQYLGLVGNNIRGII-----PDPIGNLTLLNVLQLGFNKLQGS----I 446 (973)
Q Consensus 380 ~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~-----p~~~~~l~~L~~L~Ls~N~l~~~----~ 446 (973)
..++|++|+|++|++++. ++..+..+++|++|+|++|++.... +..+..+++|++|++++|++++. +
T Consensus 197 ~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l 276 (461)
T 1z7x_W 197 SPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDL 276 (461)
T ss_dssp SCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHH
T ss_pred CCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHH
Confidence 345788888888888754 4667777888888888888876432 22333577888888888888754 5
Q ss_pred ccccccccccccccccCcccccCCCcccccc----ccccceeeccCCccccc----CCcccccccccceeccccCccccc
Q 039720 447 PSYLGKCQNLMQLSAPNNKLNGTLPPQIFGI----TTLSKLLDLSENHLSGS----IPLEVGNLKSLVQLDISRNNFSNE 518 (973)
Q Consensus 447 p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~----~~l~~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~~~ 518 (973)
+..+..+++|++|++++|.+.+..+..+... ...++.|++++|.+++. ++..+..+++|+.|++++|++++.
T Consensus 277 ~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~ 356 (461)
T 1z7x_W 277 CRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDA 356 (461)
T ss_dssp HHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHH
T ss_pred HHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccc
Confidence 6677778888888888888764322222211 12234666666666543 344455566677777777766654
Q ss_pred ccccccC-----ccchhhhcccCccccc----ccccchhhhccCCeecCCCCcccc
Q 039720 519 IPVTLSA-----CTTLEYLLMQGNSFNG----SIPQSLNALKSIKELDLSCNNLSG 565 (973)
Q Consensus 519 ~p~~~~~-----l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~ 565 (973)
.+..+.. .++|++|+|++|++++ .+|..+..+++|++|+|++|++++
T Consensus 357 ~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 357 GVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred cHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCH
Confidence 4443332 4566666666666664 556666666666666666666654
No 299
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=1.4e-34 Score=337.37 Aligned_cols=359 Identities=18% Similarity=0.153 Sum_probs=204.2
Q ss_pred CCEEEccCCCCCCCCCcc-ccccCCCCEEeeecccCCC----CCCcccccCCCccceEecccccccchhhhh-cccc---
Q 039720 88 LRVINLANNSFHGQIPKE-VGRLFRLETIVLSNNSFSG----KIPTNLSRCFNLIDFWVHTNNLVGEIQAII-GNWL--- 158 (973)
Q Consensus 88 L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~Ls~n~l~~----~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~-~~l~--- 158 (973)
|++|||++|+++...... +..+++|++|+|++|.+++ .+|..+..+++|++|++++|.+.+..+..+ ..++
T Consensus 5 l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~ 84 (461)
T 1z7x_W 5 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPS 84 (461)
T ss_dssp EEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTT
T ss_pred ceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCC
Confidence 444444444443221111 3444445555555544442 233344444445555555554444333222 2233
Q ss_pred -ccceeeccCCcccc----cCCCCCCCCCcccEEEccCCcCCCCCCCccc-----CCCccceeccCCCCccccC----Cc
Q 039720 159 -KIERLSLYGNQLTG----QLPPSIGNLSALQTFDIAGNKLDGRIPDSLG-----QLRNLNYLGTSENDFSGMF----PL 224 (973)
Q Consensus 159 -~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-----~L~~L~~L~Ls~N~l~~~~----p~ 224 (973)
+|++|+|++|+++. .+|..+..+++|++|+|++|+++...+..+. ..++|++|++++|++++.. +.
T Consensus 85 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 164 (461)
T 1z7x_W 85 CKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLAS 164 (461)
T ss_dssp CCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred CceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHH
Confidence 46666666666552 3455566666666666666665432222221 2445666666666665432 44
Q ss_pred cccCCCCCcEEEccCCccccCCCcccc----cCCCCCcEEEccCCccccc----CCccccCCCCCCEEEccCCcccccC-
Q 039720 225 SVCNISSLDEAYLFKNRFKGSLPVCLG----FNLPKLTVLVVAQNNLTGF----LPQSLSNASKLEWLELNENHFSGQV- 295 (973)
Q Consensus 225 ~~~~l~~L~~L~L~~N~l~~~ip~~~~----~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~- 295 (973)
.+..+++|++|++++|++.+..+..+. ...++|++|+|++|.+++. ++..+..+++|++|+|++|++++..
T Consensus 165 ~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~ 244 (461)
T 1z7x_W 165 VLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGM 244 (461)
T ss_dssp HHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHH
T ss_pred HHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHH
Confidence 455556666666666666533222222 1355777788877777753 4666777788888888888776533
Q ss_pred ----cccccCcccccceecccccCCCCCCCChhhhhhhcccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCccc
Q 039720 296 ----RINFNSLPNLSKLYLGRNNLGTRTSTDLDFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQIS 371 (973)
Q Consensus 296 ----~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~ 371 (973)
+..+..+++|++|+|++|.++.... ......+.++++|++|++++|++++..+..+....
T Consensus 245 ~~l~~~~~~~~~~L~~L~L~~n~l~~~~~--~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l-------------- 308 (461)
T 1z7x_W 245 AELCPGLLHPSSRLRTLWIWECGITAKGC--GDLCRVLRAKESLKELSLAGNELGDEGARLLCETL-------------- 308 (461)
T ss_dssp HHHHHHHTSTTCCCCEEECTTSCCCHHHH--HHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHH--------------
T ss_pred HHHHHHHhcCCCCceEEECcCCCCCHHHH--HHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHh--------------
Confidence 2333457788888888887754211 11344566677888888888876644333333211
Q ss_pred cCCCccccCCCCcCEEEcccccCCCC----CCccccCCCCCCeEEccCcccCCCCCCccCC-----cCccceEEcCCCcc
Q 039720 372 GTIPPEIRNLFNLNGLGLEYNQLTGT----IPPAIGELRNLQYLGLVGNNIRGIIPDPIGN-----LTLLNVLQLGFNKL 442 (973)
Q Consensus 372 ~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l 442 (973)
....++|+.|+|++|.+++. ++.++..+++|++|+|++|++.+..+..+.. .++|++|++++|++
T Consensus 309 ------~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i 382 (461)
T 1z7x_W 309 ------LEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDV 382 (461)
T ss_dssp ------TSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred ------ccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCC
Confidence 11234677777777777654 4555666677777777777776544443332 56777777777777
Q ss_pred cc----ccccccccccccccccccCccccc
Q 039720 443 QG----SIPSYLGKCQNLMQLSAPNNKLNG 468 (973)
Q Consensus 443 ~~----~~p~~~~~l~~L~~L~l~~N~l~~ 468 (973)
++ .+|..+..+++|++|++++|++++
T Consensus 383 ~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 383 SDSSCSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp CHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred ChhhHHHHHHHHHhCCCccEEECCCCCCCH
Confidence 75 567777777777777777777763
No 300
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=8.8e-33 Score=305.69 Aligned_cols=292 Identities=15% Similarity=0.196 Sum_probs=242.6
Q ss_pred hhHHHHHHHHhhccCCCcCCCCCCCC--CCCCCceeeeEeeCCCCeEEEEEeeccCccccccCCC--cCCCCCCEEEccC
Q 039720 20 HVKHATVTFNMQQLHDPLGVTKSWNN--SINLCQWTGVTCGHRHQRVTKLDLESQNIGGFLSPYI--GNLSFLRVINLAN 95 (973)
Q Consensus 20 ~~~~~ll~~~~~~~~d~~~~l~sw~~--~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l--~~l~~L~~L~L~~ 95 (973)
..+++...-.+....|+..++.+|+. ..++|.|.++-|.............+.... .++..+ ...+.+++|+|++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~-~~~~~l~~~~~~~l~~L~L~~ 90 (328)
T 4fcg_A 12 SGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALK-ATADLLEDATQPGRVALELRS 90 (328)
T ss_dssp -----CCCC--CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHH-HHHHHHHHHTSTTCCEEEEES
T ss_pred ccccceeeeccccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchh-hhHHHHhcccccceeEEEccC
Confidence 33444444455566777888999975 257899998887432211100111111111 111111 2357899999999
Q ss_pred CCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccceeeccCCcccccCC
Q 039720 96 NSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLYGNQLTGQLP 175 (973)
Q Consensus 96 n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p 175 (973)
|+++ .+|..++++++|++|+|++|.++ .+|..++++++|++|++++|++. .+|..++++++|++|+|++|++.+.+|
T Consensus 91 n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p 167 (328)
T 4fcg_A 91 VPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELP 167 (328)
T ss_dssp SCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCC
T ss_pred CCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccC
Confidence 9998 89999999999999999999999 89999999999999999999998 789999999999999999999999999
Q ss_pred CCCCC---------CCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccCCccccCC
Q 039720 176 PSIGN---------LSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFKGSL 246 (973)
Q Consensus 176 ~~~~~---------l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~i 246 (973)
..++. +++|++|+|++|+++ .+|..++++++|++|+|++|++++ +|..+..+++|++|+|++|.+.+.+
T Consensus 168 ~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~ 245 (328)
T 4fcg_A 168 EPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNY 245 (328)
T ss_dssp SCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBC
T ss_pred hhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhh
Confidence 98875 999999999999999 899999999999999999999995 6668999999999999999999999
Q ss_pred CcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceecccccCCCC
Q 039720 247 PVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNLGTR 318 (973)
Q Consensus 247 p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 318 (973)
|..+. ++++|++|+|++|.+.+.+|..+.++++|++|+|++|++.+.+|..+..+++|+.+++..|.+..+
T Consensus 246 p~~~~-~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~~l 316 (328)
T 4fcg_A 246 PPIFG-GRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQL 316 (328)
T ss_dssp CCCTT-CCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSCC-
T ss_pred HHHhc-CCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHHHH
Confidence 98776 899999999999999999999999999999999999999999999999999999999998877543
No 301
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=3.9e-31 Score=296.51 Aligned_cols=213 Identities=18% Similarity=0.202 Sum_probs=164.4
Q ss_pred CCCCCCCCCceeeeEeeCCCCeEEEEEeeccCccccccCCCcCCCCCCEEEccCCCCCCCCCccccccCCCCEEeeeccc
Q 039720 42 SWNNSINLCQWTGVTCGHRHQRVTKLDLESQNIGGFLSPYIGNLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNS 121 (973)
Q Consensus 42 sw~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~ 121 (973)
.|.....+|.|.|+ |+- ++++++ .+|..+. ++|++|+|++|++++..+..|+++++|++|+|++|.
T Consensus 22 ~~~~~~~~C~~~~~-c~~----------~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 87 (353)
T 2z80_A 22 SSNQASLSCDRNGI-CKG----------SSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNG 87 (353)
T ss_dssp -----CCEECTTSE-EEC----------CSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred CCCccCCCCCCCeE-eeC----------CCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCc
Confidence 56656678999988 753 445554 4676554 589999999999997666689999999999999999
Q ss_pred CCCCCCcccccCCCccceEecccccccchhhhhccccccceeeccCCcccccCCC--CCCCCCcccEEEccCC-cCCCCC
Q 039720 122 FSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLYGNQLTGQLPP--SIGNLSALQTFDIAGN-KLDGRI 198 (973)
Q Consensus 122 l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~L~~N-~l~~~~ 198 (973)
+++..|..|+++++|++|++++|++.+..+..++++++|++|+|++|++++ +|. .|+++++|++|++++| .+++..
T Consensus 88 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~~l~~L~~L~l~~n~~~~~~~ 166 (353)
T 2z80_A 88 INTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKT-LGETSLFSHLTKLQILRVGNMDTFTKIQ 166 (353)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSS-SCSSCSCTTCTTCCEEEEEESSSCCEEC
T ss_pred cCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcc-cCchhhhccCCCCcEEECCCCccccccC
Confidence 998778889999999999999999887777778888999999999998884 554 7888889999999888 466556
Q ss_pred CCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccCCccccCCCcccccCCCCCcEEEccCCccccc
Q 039720 199 PDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGF 270 (973)
Q Consensus 199 p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~ 270 (973)
+..|.++++|++|++++|++++..|..+.++++|++|++++|++. .+|..++..+++|++|++++|.+++.
T Consensus 167 ~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~ 237 (353)
T 2z80_A 167 RKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTF 237 (353)
T ss_dssp TTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST-THHHHHHHHTTTEEEEEEESCBCTTC
T ss_pred HHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc-cchhhhhhhcccccEEECCCCccccc
Confidence 778888888888888888888777877777777777777777765 55555544456666666666666544
No 302
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=9.1e-30 Score=279.41 Aligned_cols=250 Identities=19% Similarity=0.243 Sum_probs=209.5
Q ss_pred CceeeeEeeCCCCeEEEEEeeccCccccccCCCcCCCCCCEEEccCCCCCCCCCc-cccccCCCCEEeeecccCCC--CC
Q 039720 50 CQWTGVTCGHRHQRVTKLDLESQNIGGFLSPYIGNLSFLRVINLANNSFHGQIPK-EVGRLFRLETIVLSNNSFSG--KI 126 (973)
Q Consensus 50 c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~-~~~~l~~L~~L~Ls~n~l~~--~~ 126 (973)
|.|.+|.|+.. +++ .+|..+. ++|++|+|++|+++ .+|. .|+++++|++|+|++|.++. .+
T Consensus 7 C~~~~l~c~~~------------~l~-~ip~~~~--~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~ 70 (306)
T 2z66_A 7 CSGTEIRCNSK------------GLT-SVPTGIP--SSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCC 70 (306)
T ss_dssp EETTEEECCSS------------CCS-SCCSCCC--TTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEE
T ss_pred eCCCEEEcCCC------------Ccc-cCCCCCC--CCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCc
Confidence 78999999753 222 3454332 68999999999998 4554 57899999999999999973 34
Q ss_pred CcccccCCCccceEecccccccchhhhhccccccceeeccCCcccccCC-CCCCCCCcccEEEccCCcCCCCCCCcccCC
Q 039720 127 PTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLYGNQLTGQLP-PSIGNLSALQTFDIAGNKLDGRIPDSLGQL 205 (973)
Q Consensus 127 p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L 205 (973)
|..+..+++|++|++++|.+. .+|..+..+++|++|++++|++++..+ ..+.++++|++|++++|++++..+..|.++
T Consensus 71 ~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 149 (306)
T 2z66_A 71 SQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGL 149 (306)
T ss_dssp EHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTC
T ss_pred ccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccC
Confidence 677888999999999999887 466678889999999999999986554 578899999999999999988888889999
Q ss_pred CccceeccCCCCccc-cCCccccCCCCCcEEEccCCccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEE
Q 039720 206 RNLNYLGTSENDFSG-MFPLSVCNISSLDEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWL 284 (973)
Q Consensus 206 ~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 284 (973)
++|++|++++|.+++ ..|..+..+++|++|+|++|++++..|..+. ++++|++|+|++|.+++..+..|..+++|++|
T Consensus 150 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 228 (306)
T 2z66_A 150 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFN-SLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVL 228 (306)
T ss_dssp TTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTT-TCTTCCEEECTTSCCSBCCSGGGTTCTTCCEE
T ss_pred cCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhc-CCCCCCEEECCCCccCccChhhccCcccCCEe
Confidence 999999999999987 6788899999999999999999855555554 78999999999999998777788999999999
Q ss_pred EccCCcccccCcccccCcc-cccceecccccCCC
Q 039720 285 ELNENHFSGQVRINFNSLP-NLSKLYLGRNNLGT 317 (973)
Q Consensus 285 ~Ls~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~ 317 (973)
+|++|++++..+..+..++ +|++|+|++|.++.
T Consensus 229 ~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 229 DYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp ECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred ECCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 9999999988888888885 89999999998865
No 303
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=2.6e-31 Score=292.21 Aligned_cols=267 Identities=16% Similarity=0.166 Sum_probs=160.3
Q ss_pred CCCCCCCCCCCceeeeEeeCCCCeEEEEEeeccCccccccCCCcCCCCCCEEEccCCCC-CCCCCcccc-------ccCC
Q 039720 40 TKSWNNSINLCQWTGVTCGHRHQRVTKLDLESQNIGGFLSPYIGNLSFLRVINLANNSF-HGQIPKEVG-------RLFR 111 (973)
Q Consensus 40 l~sw~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l-~~~~p~~~~-------~l~~ 111 (973)
..+|.....|+.|..+.......+++.++++++.+ .+|..+... |+.|+|++|++ .+.+|..+. ++++
T Consensus 21 ~~~~~~~~~c~~~~~~~~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~ 96 (312)
T 1wwl_A 21 KPDWSSAFNCLGAADVELYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISG 96 (312)
T ss_dssp SCCGGGGGGSSSCSEEEEEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSC
T ss_pred ccchHHHhhhhccccEEEEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCC
Confidence 45777656666676654432233566667777776 566555544 77777777777 345666555 6777
Q ss_pred CCEEeeecccCCCCCCccc--ccCCCccceEecccccccchhhhhccc-----cccceeeccCCcccccCCCCCCCCCcc
Q 039720 112 LETIVLSNNSFSGKIPTNL--SRCFNLIDFWVHTNNLVGEIQAIIGNW-----LKIERLSLYGNQLTGQLPPSIGNLSAL 184 (973)
Q Consensus 112 L~~L~Ls~n~l~~~~p~~~--~~l~~L~~L~l~~n~~~~~~~~~~~~l-----~~L~~L~L~~n~l~~~~p~~~~~l~~L 184 (973)
|++|+|++|.+++.+|..+ +.+++|++|++++|++.+. |+.++.+ ++|++|+|++|++++..|..|+++++|
T Consensus 97 L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L 175 (312)
T 1wwl_A 97 LQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPAL 175 (312)
T ss_dssp CCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSC
T ss_pred ccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCC
Confidence 7777777777777777765 6677777777777766665 5666655 666666666666666555666666666
Q ss_pred cEEEccCCcCCCC--CCCcc--cCCCccceeccCCCCccc---cCCccccCCCCCcEEEccCCccccCCCcccccCCCCC
Q 039720 185 QTFDIAGNKLDGR--IPDSL--GQLRNLNYLGTSENDFSG---MFPLSVCNISSLDEAYLFKNRFKGSLPVCLGFNLPKL 257 (973)
Q Consensus 185 ~~L~L~~N~l~~~--~p~~~--~~L~~L~~L~Ls~N~l~~---~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L 257 (973)
++|+|++|++.+. .|..+ +++++|++|+|++|++++ .....+.++++|++|+|++|++++.+|...+..+++|
T Consensus 176 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L 255 (312)
T 1wwl_A 176 STLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQL 255 (312)
T ss_dssp CEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTC
T ss_pred CEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCC
Confidence 6666666665543 22223 566666666666666652 1112334555666666666666554443333345566
Q ss_pred cEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceecccccCC
Q 039720 258 TVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNLG 316 (973)
Q Consensus 258 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 316 (973)
++|+|++|.|+ .+|..+. ++|++|+|++|+|++. |. +..+++|++|+|++|+++
T Consensus 256 ~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 256 NSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp CEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTT
T ss_pred CEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCC
Confidence 66666666665 4454444 5566666666666554 33 555555666666555554
No 304
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=1.1e-29 Score=301.78 Aligned_cols=296 Identities=23% Similarity=0.284 Sum_probs=207.7
Q ss_pred CCcCCCCCCCCCCCCCceeeeEee------CCCCeEEEEEeeccCccccccCCCcCCCCCCEEEccCCCCCCCCCccccc
Q 039720 35 DPLGVTKSWNNSINLCQWTGVTCG------HRHQRVTKLDLESQNIGGFLSPYIGNLSFLRVINLANNSFHGQIPKEVGR 108 (973)
Q Consensus 35 d~~~~l~sw~~~~~~c~w~gv~C~------~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ 108 (973)
|...++++|..+.+||.|+|..|. -....++.|++++++++ .+|..+. ++|++|+|++|+|+ .+|. .
T Consensus 7 ~~~~~w~~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~ 79 (622)
T 3g06_A 7 EYDAVWSAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---L 79 (622)
T ss_dssp ---CHHHHHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---C
T ss_pred HHHHHHHHHHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---c
Confidence 456677899877889999775321 11124677777777776 5666655 67777777777777 5665 4
Q ss_pred cCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccceeeccCCcccccCCCCCCCCCcccEEE
Q 039720 109 LFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLYGNQLTGQLPPSIGNLSALQTFD 188 (973)
Q Consensus 109 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 188 (973)
+++|++|+|++|.++ .+|. . +++|++|+|++|.+++ +|. .+++|++|+
T Consensus 80 l~~L~~L~Ls~N~l~-~lp~---~------------------------l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~ 127 (622)
T 3g06_A 80 PPELRTLEVSGNQLT-SLPV---L------------------------PPGLLELSIFSNPLTH-LPA---LPSGLCKLW 127 (622)
T ss_dssp CTTCCEEEECSCCCS-CCCC---C------------------------CTTCCEEEECSCCCCC-CCC---CCTTCCEEE
T ss_pred CCCCCEEEcCCCcCC-cCCC---C------------------------CCCCCEEECcCCcCCC-CCC---CCCCcCEEE
Confidence 677777777777776 4554 2 3556666666666663 444 456777777
Q ss_pred ccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccCCccccCCCcccccCCCCCcEEEccCCccc
Q 039720 189 IAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLT 268 (973)
Q Consensus 189 L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~ 268 (973)
+++|+++ .+|.. +++|++|+|++|++++ +|. .+++|+.|++++|+++ .+| ..+++|+.|++++|.|+
T Consensus 128 L~~N~l~-~lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~-~l~----~~~~~L~~L~Ls~N~l~ 194 (622)
T 3g06_A 128 IFGNQLT-SLPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLT-SLP----MLPSGLQELSVSDNQLA 194 (622)
T ss_dssp CCSSCCS-CCCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCS-CCC----CCCTTCCEEECCSSCCS
T ss_pred CCCCCCC-cCCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCC-CCc----ccCCCCcEEECCCCCCC
Confidence 7777777 35543 3777777787777774 333 3467778888888887 566 24678888888888888
Q ss_pred ccCCccccCCCCCCEEEccCCcccccCcccccCcccccceecccccCCCCCCCChhhhhhhcccccceeeccccccccCC
Q 039720 269 GFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNLGTRTSTDLDFITLLTNCSKLVKLGLVFNRFGGA 348 (973)
Q Consensus 269 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~ 348 (973)
+ +|.. +++|+.|++++|+++.+.. .+++|++|+|++|+|+.
T Consensus 195 ~-l~~~---~~~L~~L~L~~N~l~~l~~----~~~~L~~L~Ls~N~L~~------------------------------- 235 (622)
T 3g06_A 195 S-LPTL---PSELYKLWAYNNRLTSLPA----LPSGLKELIVSGNRLTS------------------------------- 235 (622)
T ss_dssp C-CCCC---CTTCCEEECCSSCCSSCCC----CCTTCCEEECCSSCCSC-------------------------------
T ss_pred C-CCCc---cchhhEEECcCCcccccCC----CCCCCCEEEccCCccCc-------------------------------
Confidence 5 4442 4788888888888885432 23667777777776543
Q ss_pred CChhhhhhhhhhhHhhhcCCccccCCCccccCCCCcCEEEcccccCCCCCCccccCCCCCCeEEccCcccCCCCCCccCC
Q 039720 349 LPHSIANLSTTMTLIAMAGNQISGTIPPEIRNLFNLNGLGLEYNQLTGTIPPAIGELRNLQYLGLVGNNIRGIIPDPIGN 428 (973)
Q Consensus 349 ~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 428 (973)
+| ..+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..+.+
T Consensus 236 -------------------------lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~ 282 (622)
T 3g06_A 236 -------------------------LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIH 282 (622)
T ss_dssp -------------------------CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGG
T ss_pred -------------------------CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhh
Confidence 22 23467888899999888 4555 5688999999999998 67888999
Q ss_pred cCccceEEcCCCcccccccccccccc
Q 039720 429 LTLLNVLQLGFNKLQGSIPSYLGKCQ 454 (973)
Q Consensus 429 l~~L~~L~Ls~N~l~~~~p~~~~~l~ 454 (973)
+++|+.|+|++|.+++.+|..+..++
T Consensus 283 l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 283 LSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp SCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred ccccCEEEecCCCCCCcCHHHHHhcc
Confidence 99999999999999988888777665
No 305
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.3e-29 Score=284.01 Aligned_cols=283 Identities=16% Similarity=0.140 Sum_probs=147.9
Q ss_pred CCCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccceee
Q 039720 85 LSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLS 164 (973)
Q Consensus 85 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~ 164 (973)
++.....++++|+++ .+|..+. ++|++|+|++|.+++. .+..+.++++|++|+
T Consensus 30 C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~------------------------~~~~~~~l~~L~~L~ 82 (353)
T 2z80_A 30 CDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYI------------------------SNSDLQRCVNLQALV 82 (353)
T ss_dssp ECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEE------------------------CTTTTTTCTTCCEEE
T ss_pred CCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCccc------------------------CHHHhccCCCCCEEE
Confidence 344444555555555 4555443 3555555555555432 222334445556666
Q ss_pred ccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCC-ccccCCCCCcEEEccCCccc
Q 039720 165 LYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFP-LSVCNISSLDEAYLFKNRFK 243 (973)
Q Consensus 165 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~ 243 (973)
|++|++++..|..|+++++|++|+|++|++++..+..|+++++|++|++++|++++..+ ..+.++++|++|++++|...
T Consensus 83 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~ 162 (353)
T 2z80_A 83 LTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTF 162 (353)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSC
T ss_pred CCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccc
Confidence 66666665555566666666666666666664333346666666666666666653332 24445555555555554211
Q ss_pred cCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceecccccCCCCCCCCh
Q 039720 244 GSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNLGTRTSTDL 323 (973)
Q Consensus 244 ~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 323 (973)
+.++...+.++++|++|++++|.+++..|..|.++++|++|++++|+++......+..+++|++|+|++|+++..
T Consensus 163 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~----- 237 (353)
T 2z80_A 163 TKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTF----- 237 (353)
T ss_dssp CEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTC-----
T ss_pred cccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccc-----
Confidence 133222223445555555555555544455555555555555555555433333333344444444444444332
Q ss_pred hhhhhhcccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCccccCCCccccCCCCcCEEEcccccCCC----CCC
Q 039720 324 DFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEIRNLFNLNGLGLEYNQLTG----TIP 399 (973)
Q Consensus 324 ~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~----~~p 399 (973)
.+..+. .......++.++|++|.+++ .+|
T Consensus 238 -------------------------~~~~l~----------------------~~~~~~~l~~l~L~~~~l~~~~l~~l~ 270 (353)
T 2z80_A 238 -------------------------HFSELS----------------------TGETNSLIKKFTFRNVKITDESLFQVM 270 (353)
T ss_dssp -------------------------CCC----------------------------CCCCCCEEEEESCBCCHHHHHHHH
T ss_pred -------------------------cccccc----------------------cccccchhhccccccccccCcchhhhH
Confidence 211111 01223445666666666654 356
Q ss_pred ccccCCCCCCeEEccCcccCCCCCCccCCcCccceEEcCCCcccccc
Q 039720 400 PAIGELRNLQYLGLVGNNIRGIIPDPIGNLTLLNVLQLGFNKLQGSI 446 (973)
Q Consensus 400 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 446 (973)
.++..+++|++|+|++|+|+.+.+..|..+++|++|++++|++.+..
T Consensus 271 ~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~ 317 (353)
T 2z80_A 271 KLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 317 (353)
T ss_dssp HHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred HHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcC
Confidence 66777777777777777777433333577777777777777777443
No 306
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=3.8e-32 Score=327.42 Aligned_cols=431 Identities=16% Similarity=0.128 Sum_probs=270.4
Q ss_pred CCceeeeEeeCCCCeEEEEEeeccCccccccCCCcCCCCCCEEEccCCCC---CCCCCcccc------------ccCCCC
Q 039720 49 LCQWTGVTCGHRHQRVTKLDLESQNIGGFLSPYIGNLSFLRVINLANNSF---HGQIPKEVG------------RLFRLE 113 (973)
Q Consensus 49 ~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l---~~~~p~~~~------------~l~~L~ 113 (973)
|++|.++.+... .++ .+. +.....++..+..+++|++|+|+++.. .+.+|..++ .+++|+
T Consensus 41 ck~W~~~~~~~~-~~l---~~~-~~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~ 115 (592)
T 3ogk_B 41 CRRWFKIDSETR-EHV---TMA-LCYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLK 115 (592)
T ss_dssp CHHHHHHHHHHC-CEE---EES-CGGGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCC
T ss_pred hHHHHHhhhccc-cEE---EEe-eccccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCC
Confidence 347999965422 122 222 223333444566789999999988532 245665555 789999
Q ss_pred EEeeecccCCCCCCcccccC--CCccceEecccccc--cchhhhhccccccceeeccCCccccc----CCCCCCCCCccc
Q 039720 114 TIVLSNNSFSGKIPTNLSRC--FNLIDFWVHTNNLV--GEIQAIIGNWLKIERLSLYGNQLTGQ----LPPSIGNLSALQ 185 (973)
Q Consensus 114 ~L~Ls~n~l~~~~p~~~~~l--~~L~~L~l~~n~~~--~~~~~~~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~ 185 (973)
+|+|++|.+++..+..++.. .+|++|++++|... ..++....++++|++|+|++|.+++. ++..+.++++|+
T Consensus 116 ~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~ 195 (592)
T 3ogk_B 116 SVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLE 195 (592)
T ss_dssp EEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCC
T ss_pred eEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCcc
Confidence 99999999887777777764 45999999988732 23455556889999999999998755 333455788999
Q ss_pred EEEccCCcCCC----CCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccCCccc---cCCCcccccCCCCCc
Q 039720 186 TFDIAGNKLDG----RIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFK---GSLPVCLGFNLPKLT 258 (973)
Q Consensus 186 ~L~L~~N~l~~----~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~---~~ip~~~~~~l~~L~ 258 (973)
+|++++|.+++ .++..+.++++|++|++++|.+.+ +|..+.++++|++|+++..... +..+..+. .+++|+
T Consensus 196 ~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~-~~~~L~ 273 (592)
T 3ogk_B 196 VLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLV-FPRKLC 273 (592)
T ss_dssp EEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCC-CCTTCC
T ss_pred EEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhh-cccccc
Confidence 99999999873 334446678999999999999886 6678888999999999753322 22233333 678889
Q ss_pred EEEccCCcccccCCccccCCCCCCEEEccCCcccccCc-ccccCcccccceecccccCCCCCCCChhhhhhhccccccee
Q 039720 259 VLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVR-INFNSLPNLSKLYLGRNNLGTRTSTDLDFITLLTNCSKLVK 337 (973)
Q Consensus 259 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~ 337 (973)
.|+++++... .+|..+..+++|++|+|++|.+++... ..+..+++|++|+|+ |.+.. .........+++|++
T Consensus 274 ~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~-----~~l~~~~~~~~~L~~ 346 (592)
T 3ogk_B 274 RLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGD-----RGLEVLAQYCKQLKR 346 (592)
T ss_dssp EEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHH-----HHHHHHHHHCTTCCE
T ss_pred ccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCH-----HHHHHHHHhCCCCCE
Confidence 9998886444 567788888899999999988765443 346788889999888 44422 122334456788888
Q ss_pred ecccc-----------ccccCCCChhhhhhhhhhhHhhhcCCccccCCCccccCCCCcCEEEcccccCCCCCCccccC-C
Q 039720 338 LGLVF-----------NRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEIRNLFNLNGLGLEYNQLTGTIPPAIGE-L 405 (973)
Q Consensus 338 L~l~~-----------N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l 405 (973)
|+++. |.+++.....+ +..+++|++|+++.|++++..+..+.. +
T Consensus 347 L~L~~g~~~~~~~~~~~~~~~~~~~~l------------------------~~~~~~L~~L~l~~~~l~~~~~~~l~~~~ 402 (592)
T 3ogk_B 347 LRIERGADEQGMEDEEGLVSQRGLIAL------------------------AQGCQELEYMAVYVSDITNESLESIGTYL 402 (592)
T ss_dssp EEEECCCCSSTTSSTTCCCCHHHHHHH------------------------HHHCTTCSEEEEEESCCCHHHHHHHHHHC
T ss_pred EEeecCccccccccccCccCHHHHHHH------------------------HhhCccCeEEEeecCCccHHHHHHHHhhC
Confidence 88882 44442211111 223455666666555555544444444 5
Q ss_pred CCCCeEEcc----CcccCCC-----CCCccCCcCccceEEcCCCc--ccccccccccc-ccccccccccCcccccC-CCc
Q 039720 406 RNLQYLGLV----GNNIRGI-----IPDPIGNLTLLNVLQLGFNK--LQGSIPSYLGK-CQNLMQLSAPNNKLNGT-LPP 472 (973)
Q Consensus 406 ~~L~~L~L~----~N~l~~~-----~p~~~~~l~~L~~L~Ls~N~--l~~~~p~~~~~-l~~L~~L~l~~N~l~~~-~p~ 472 (973)
++|+.|+++ .|.+++. ++..+.++++|++|++++|. +++..+..+.. +++|+.|++++|.+++. ++.
T Consensus 403 ~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~ 482 (592)
T 3ogk_B 403 KNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLME 482 (592)
T ss_dssp CSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHH
T ss_pred CCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHH
Confidence 566666664 4445432 12224445566666665322 44433333332 55566666666665531 222
Q ss_pred cccccccccceeeccCCccccc-CCcccccccccceeccccCccccc
Q 039720 473 QIFGITTLSKLLDLSENHLSGS-IPLEVGNLKSLVQLDISRNNFSNE 518 (973)
Q Consensus 473 ~~~~~~~l~~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~ls~N~l~~~ 518 (973)
.+.++.++ +.|++++|.+++. ++..+..+++|+.|+|++|++++.
T Consensus 483 ~~~~~~~L-~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 483 FSRGCPNL-QKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp HHTCCTTC-CEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred HHhcCccc-CeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 22233333 3566666665533 233344566777777777776644
No 307
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=9.8e-29 Score=271.18 Aligned_cols=230 Identities=21% Similarity=0.194 Sum_probs=116.4
Q ss_pred ccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCC--CCCcccCCCccceeccCCCCccccCCccccCCCCCcEEE
Q 039720 159 KIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGR--IPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAY 236 (973)
Q Consensus 159 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 236 (973)
+|++|+|++|+++...+..|.++++|++|+|++|+++.. .|..+..+++|++|++++|.+++ +|..+..+++|++|+
T Consensus 29 ~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~-l~~~~~~l~~L~~L~ 107 (306)
T 2z66_A 29 SATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLD 107 (306)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEEE-EEEEEETCTTCCEEE
T ss_pred CCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCcccc-ChhhcCCCCCCCEEE
Confidence 445555555555532223345555555555555555411 13444455555555555555552 333444455555555
Q ss_pred ccCCccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccc-cCcccccCcccccceecccccC
Q 039720 237 LFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSG-QVRINFNSLPNLSKLYLGRNNL 315 (973)
Q Consensus 237 L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~l 315 (973)
+++|++++..+...+..+++|++|++++|.+++..+..|.++++|++|+|++|.+++ ..|..|..+++|++|+|++|++
T Consensus 108 l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l 187 (306)
T 2z66_A 108 FQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQL 187 (306)
T ss_dssp CTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCC
T ss_pred CCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCc
Confidence 555554422221223344555555555555554444455555555555555555543 3344444444444444444433
Q ss_pred CCCCCCChhhhhhhcccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCccccCCCccccCCCCcCEEEcccccCC
Q 039720 316 GTRTSTDLDFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEIRNLFNLNGLGLEYNQLT 395 (973)
Q Consensus 316 ~~~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 395 (973)
+ +..|..+..+++|+.|+|++|+++
T Consensus 188 ~-------------------------------------------------------~~~~~~~~~l~~L~~L~L~~N~l~ 212 (306)
T 2z66_A 188 E-------------------------------------------------------QLSPTAFNSLSSLQVLNMSHNNFF 212 (306)
T ss_dssp C-------------------------------------------------------EECTTTTTTCTTCCEEECTTSCCS
T ss_pred C-------------------------------------------------------CcCHHHhcCCCCCCEEECCCCccC
Confidence 2 123344455556666666666666
Q ss_pred CCCCccccCCCCCCeEEccCcccCCCCCCccCCc-CccceEEcCCCcccc
Q 039720 396 GTIPPAIGELRNLQYLGLVGNNIRGIIPDPIGNL-TLLNVLQLGFNKLQG 444 (973)
Q Consensus 396 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~ 444 (973)
+..+..+..+++|++|+|++|++.+..|..+..+ ++|++|+|++|.+++
T Consensus 213 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 213 SLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp BCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred ccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 5555555666666666666666665555555555 356666666666653
No 308
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=3.3e-28 Score=282.24 Aligned_cols=242 Identities=21% Similarity=0.200 Sum_probs=180.3
Q ss_pred eccCccccccCCCcCCCCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccc
Q 039720 70 ESQNIGGFLSPYIGNLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGE 149 (973)
Q Consensus 70 ~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~ 149 (973)
++.+++ .+|..+. ++|++|+|++|++++..|..|+++++|++|+|++|.+++..|..|.++++|++|++++|++.+.
T Consensus 62 ~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~ 138 (452)
T 3zyi_A 62 TRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVI 138 (452)
T ss_dssp CSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBC
T ss_pred CCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCcc
Confidence 334443 3555443 6788899999988887788888899999999999988877778888888888888888888777
Q ss_pred hhhhhccccccceeeccCCcccccCCCCCCCCCcccEEEccCC-cCCCCCCCcccCCCccceeccCCCCccccCCccccC
Q 039720 150 IQAIIGNWLKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGN-KLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCN 228 (973)
Q Consensus 150 ~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~ 228 (973)
.+..|..+++|++|+|++|++++..+..|.++++|++|++++| .+....+..|.++++|++|+|++|++++. | .+..
T Consensus 139 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~ 216 (452)
T 3zyi_A 139 PSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTP 216 (452)
T ss_dssp CTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTT
T ss_pred ChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccc
Confidence 7777788888888888888887666667788888888888874 44433344677888888888888887753 3 4667
Q ss_pred CCCCcEEEccCCccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccce
Q 039720 229 ISSLDEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKL 308 (973)
Q Consensus 229 l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 308 (973)
+++|++|+|++|++++..|..+ .++++|+.|+|++|.+++..|..|.++++|++|+|++|+|++..+..|..+++|+.|
T Consensus 217 l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 295 (452)
T 3zyi_A 217 LVGLEELEMSGNHFPEIRPGSF-HGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVEL 295 (452)
T ss_dssp CTTCCEEECTTSCCSEECGGGG-TTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEE
T ss_pred cccccEEECcCCcCcccCcccc-cCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEE
Confidence 7777777777777774444444 377777777777777777777777777777777777777777777777777777777
Q ss_pred ecccccCCC
Q 039720 309 YLGRNNLGT 317 (973)
Q Consensus 309 ~L~~N~l~~ 317 (973)
+|++|.+..
T Consensus 296 ~L~~Np~~C 304 (452)
T 3zyi_A 296 HLHHNPWNC 304 (452)
T ss_dssp ECCSSCEEC
T ss_pred EccCCCcCC
Confidence 777777643
No 309
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=3.4e-31 Score=319.08 Aligned_cols=439 Identities=17% Similarity=0.107 Sum_probs=265.2
Q ss_pred EEEccCCCCCCCCCccccccCCCCEEeeecccC---CCCCCcccc------------cCCCccceEecccccccchhhhh
Q 039720 90 VINLANNSFHGQIPKEVGRLFRLETIVLSNNSF---SGKIPTNLS------------RCFNLIDFWVHTNNLVGEIQAII 154 (973)
Q Consensus 90 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l---~~~~p~~~~------------~l~~L~~L~l~~n~~~~~~~~~~ 154 (973)
.+.+.++ +...++..+.++++|++|+|+++.. .+.+|..++ .+++|++|++++|.+.+..+..+
T Consensus 54 ~l~~~~~-~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l 132 (592)
T 3ogk_B 54 HVTMALC-YTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRL 132 (592)
T ss_dssp EEEESCG-GGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHH
T ss_pred EEEEeec-cccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHH
Confidence 3444433 3334455567899999999988543 245555544 67888899999888887777777
Q ss_pred ccc--cccceeeccCCc-ccc-cCCCCCCCCCcccEEEccCCcCCCC----CCCcccCCCccceeccCCCCcc----ccC
Q 039720 155 GNW--LKIERLSLYGNQ-LTG-QLPPSIGNLSALQTFDIAGNKLDGR----IPDSLGQLRNLNYLGTSENDFS----GMF 222 (973)
Q Consensus 155 ~~l--~~L~~L~L~~n~-l~~-~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~L~~L~~L~Ls~N~l~----~~~ 222 (973)
... .+|++|+|++|. ++. .++..+.++++|++|+|++|.+++. ++..+.++++|++|++++|.++ +.+
T Consensus 133 ~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l 212 (592)
T 3ogk_B 133 AKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDL 212 (592)
T ss_dssp HHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHH
T ss_pred HHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHH
Confidence 764 448889888886 221 1222234678888888888887655 2334566788888888888886 334
Q ss_pred CccccCCCCCcEEEccCCccccCCCcccccCCCCCcEEEccCCccc---ccCCccccCCCCCCEEEccCCcccccCcccc
Q 039720 223 PLSVCNISSLDEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLT---GFLPQSLSNASKLEWLELNENHFSGQVRINF 299 (973)
Q Consensus 223 p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~---~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 299 (973)
+..+.++++|+.|++++|.+. .+|..+. ++++|+.|+++.+... ...+..+..+++|+.|+++++... ..+..+
T Consensus 213 ~~~~~~~~~L~~L~L~~~~~~-~l~~~~~-~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~ 289 (592)
T 3ogk_B 213 ETIARNCRSLVSVKVGDFEIL-ELVGFFK-AAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILF 289 (592)
T ss_dssp HHHHHHCTTCCEEECSSCBGG-GGHHHHH-HCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGG
T ss_pred HHHHhhCCCCcEEeccCccHH-HHHHHHh-hhhHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHH
Confidence 445566778888888888777 3664443 6778888887754332 234456677777788777775333 455666
Q ss_pred cCcccccceecccccCCCCCCCChhhhhhhcccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCccccCCCcccc
Q 039720 300 NSLPNLSKLYLGRNNLGTRTSTDLDFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEIR 379 (973)
Q Consensus 300 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~ 379 (973)
..+++|++|+|++|.++. ......+..+++|+.|+++ +.+.. +.++..+.
T Consensus 290 ~~~~~L~~L~Ls~~~l~~-----~~~~~~~~~~~~L~~L~L~-~~~~~------------------------~~l~~~~~ 339 (592)
T 3ogk_B 290 PFAAQIRKLDLLYALLET-----EDHCTLIQKCPNLEVLETR-NVIGD------------------------RGLEVLAQ 339 (592)
T ss_dssp GGGGGCCEEEETTCCCCH-----HHHHHHHTTCTTCCEEEEE-GGGHH------------------------HHHHHHHH
T ss_pred hhcCCCcEEecCCCcCCH-----HHHHHHHHhCcCCCEEecc-CccCH------------------------HHHHHHHH
Confidence 777777777777776532 1122334566666666665 22211 01111223
Q ss_pred CCCCcCEEEcc-----------cccCCCCC-CccccCCCCCCeEEccCcccCCCCCCccCC-cCccceEEcC----CCcc
Q 039720 380 NLFNLNGLGLE-----------YNQLTGTI-PPAIGELRNLQYLGLVGNNIRGIIPDPIGN-LTLLNVLQLG----FNKL 442 (973)
Q Consensus 380 ~l~~L~~L~Ls-----------~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~Ls----~N~l 442 (973)
.+++|++|+|+ .|.+++.. +..+..+++|++|+++.|++++..+..+.. +++|+.|+++ .|.+
T Consensus 340 ~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l 419 (592)
T 3ogk_B 340 YCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERI 419 (592)
T ss_dssp HCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCC
T ss_pred hCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccc
Confidence 45567777777 24444321 122334666666666666666544444443 5666666664 4555
Q ss_pred ccc-----cccccccccccccccccCcccccCCCccccccccccceeeccCCcccccCCcccc-cccccceeccccCccc
Q 039720 443 QGS-----IPSYLGKCQNLMQLSAPNNKLNGTLPPQIFGITTLSKLLDLSENHLSGSIPLEVG-NLKSLVQLDISRNNFS 516 (973)
Q Consensus 443 ~~~-----~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~ls~N~l~ 516 (973)
++. ++..+..+++|+.|+++++. +.+++..+..+. .+++|+.|++++|+++
T Consensus 420 ~~~p~~~~~~~~~~~~~~L~~L~L~~~~-----------------------~~l~~~~~~~~~~~~~~L~~L~L~~n~l~ 476 (592)
T 3ogk_B 420 TDLPLDNGVRSLLIGCKKLRRFAFYLRQ-----------------------GGLTDLGLSYIGQYSPNVRWMLLGYVGES 476 (592)
T ss_dssp SSCCCHHHHHHHHHHCTTCCEEEEECCG-----------------------GGCCHHHHHHHHHSCTTCCEEEECSCCSS
T ss_pred cCchHHHHHHHHHHhCCCCCEEEEecCC-----------------------CCccHHHHHHHHHhCccceEeeccCCCCC
Confidence 532 22234445555555544221 113322222232 2667888888888877
Q ss_pred c-cccccccCccchhhhcccCcccccc-cccchhhhccCCeecCCCCccccccCCCC-CCCCccceEeccCC
Q 039720 517 N-EIPVTLSACTTLEYLLMQGNSFNGS-IPQSLNALKSIKELDLSCNNLSGQIPIHL-GNLPFLEYLNLSYN 585 (973)
Q Consensus 517 ~-~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~ls~N 585 (973)
+ .++..+.++++|++|++++|+|++. ++..+..+++|++|+|++|+++..-...+ ..++.+....+..+
T Consensus 477 ~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 477 DEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp HHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred HHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 5 3445556778888888888887654 34444677888888888888875422222 34566655555544
No 310
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=4.9e-28 Score=262.64 Aligned_cols=234 Identities=19% Similarity=0.172 Sum_probs=150.1
Q ss_pred eEeeCCCCeEEEEEeeccCccccccCCCcCCCCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCC
Q 039720 55 VTCGHRHQRVTKLDLESQNIGGFLSPYIGNLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCF 134 (973)
Q Consensus 55 v~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~ 134 (973)
..|.... .+.++.+++++. .+|..+ .++|++|+|++|++++..+..|+++++|++|+|++|.+++..|..+..++
T Consensus 6 C~C~~~~--~~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~ 80 (285)
T 1ozn_A 6 CVCYNEP--KVTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLA 80 (285)
T ss_dssp CEEECSS--SCEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCT
T ss_pred ceECCCC--CeEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCcc
Confidence 4565432 245566666665 345433 46788888888888866666788888888888888888765566666555
Q ss_pred CccceEecccccccchhhhhccccccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccC
Q 039720 135 NLIDFWVHTNNLVGEIQAIIGNWLKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTS 214 (973)
Q Consensus 135 ~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls 214 (973)
+|++|++++|.. ++...|..|.++++|++|++++|++++..|..|.++++|++|+++
T Consensus 81 ~L~~L~l~~n~~-----------------------l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 137 (285)
T 1ozn_A 81 LLEQLDLSDNAQ-----------------------LRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQ 137 (285)
T ss_dssp TCCEEECCSCTT-----------------------CCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEeCCCCCC-----------------------ccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECC
Confidence 555544444431 443334455555555555555555554445555555555555555
Q ss_pred CCCccccCCccccCCCCCcEEEccCCccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCccccc
Q 039720 215 ENDFSGMFPLSVCNISSLDEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQ 294 (973)
Q Consensus 215 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 294 (973)
+|++++..+..|.++++|++|+|++|+++ .+|...+.++++|++|+|++|.+++..|..|.++++|++|+|++|++++.
T Consensus 138 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 216 (285)
T 1ozn_A 138 DNALQALPDDTFRDLGNLTHLFLHGNRIS-SVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSAL 216 (285)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCcccccCHhHhccCCCccEEECCCCccc-ccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcC
Confidence 55555444444555555555555555555 34444344677777777777777777777888888888888888888877
Q ss_pred CcccccCcccccceecccccCCC
Q 039720 295 VRINFNSLPNLSKLYLGRNNLGT 317 (973)
Q Consensus 295 ~~~~~~~l~~L~~L~L~~N~l~~ 317 (973)
.+..|..+++|++|+|++|.+..
T Consensus 217 ~~~~~~~l~~L~~L~l~~N~~~c 239 (285)
T 1ozn_A 217 PTEALAPLRALQYLRLNDNPWVC 239 (285)
T ss_dssp CHHHHTTCTTCCEEECCSSCEEC
T ss_pred CHHHcccCcccCEEeccCCCccC
Confidence 77777888888888888887754
No 311
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=2.3e-29 Score=276.70 Aligned_cols=205 Identities=17% Similarity=0.171 Sum_probs=132.8
Q ss_pred ccccCCCCEEeeecccCCCCCCcccccCCCccceEeccccc-ccchhhhhc-------cccccceeeccCCcccccCCCC
Q 039720 106 VGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNL-VGEIQAIIG-------NWLKIERLSLYGNQLTGQLPPS 177 (973)
Q Consensus 106 ~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~-~~~~~~~~~-------~l~~L~~L~L~~n~l~~~~p~~ 177 (973)
++..++|++|++++|.+ .+|..+... |+.|++++|++ ...+|..+. ++++|++|+|++|.+++.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 44555666666666666 556555544 55666666665 334555544 6788888888888888888887
Q ss_pred C--CCCCcccEEEccCCcCCCCCCCcccCC-----CccceeccCCCCccccCCccccCCCCCcEEEccCCccccCC--Cc
Q 039720 178 I--GNLSALQTFDIAGNKLDGRIPDSLGQL-----RNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFKGSL--PV 248 (973)
Q Consensus 178 ~--~~l~~L~~L~L~~N~l~~~~p~~~~~L-----~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~i--p~ 248 (973)
+ +.+++|++|+|++|++++. |..++++ ++|++|+|++|++++..|..|+++++|++|+|++|++.+.+ |.
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 6 8888888888888888866 7777777 88888888888888777777877777777777777766442 22
Q ss_pred cc-ccCCCCCcEEEccCCcccc---cCCccccCCCCCCEEEccCCcccccCc-ccccCcccccceecccccC
Q 039720 249 CL-GFNLPKLTVLVVAQNNLTG---FLPQSLSNASKLEWLELNENHFSGQVR-INFNSLPNLSKLYLGRNNL 315 (973)
Q Consensus 249 ~~-~~~l~~L~~L~Ls~N~l~~---~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l 315 (973)
.+ +.++++|++|+|++|.|++ .....+.++++|++|+|++|++++..+ ..+..+++|++|+|++|+|
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l 265 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGL 265 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCC
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCcc
Confidence 22 2356666666666666662 112334455666666666666665442 2333344444444444443
No 312
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=1.1e-27 Score=276.84 Aligned_cols=248 Identities=23% Similarity=0.286 Sum_probs=187.7
Q ss_pred ccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEcc
Q 039720 159 KIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLF 238 (973)
Q Consensus 159 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 238 (973)
....++.+++.++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|+
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECC
Confidence 3456777777777 6777665 578888888888887777888888888888888888887777788888888888888
Q ss_pred CCccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccC-CcccccCcccccCcccccceecccccCCC
Q 039720 239 KNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNE-NHFSGQVRINFNSLPNLSKLYLGRNNLGT 317 (973)
Q Consensus 239 ~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 317 (973)
+|+++ .+|...+.++++|++|+|++|.|+...+..|.++++|++|+|++ |.++.+.+..|.++++|++|+|++|+++.
T Consensus 121 ~n~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 199 (440)
T 3zyj_A 121 DNRLT-TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE 199 (440)
T ss_dssp SSCCS-SCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS
T ss_pred CCcCC-eeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc
Confidence 88887 66665555788888888888888877777888888888888887 45555556677888888888888777653
Q ss_pred CCCCChhhhhhhcccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCccccCCCccccCCCCcCEEEcccccCCCC
Q 039720 318 RTSTDLDFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEIRNLFNLNGLGLEYNQLTGT 397 (973)
Q Consensus 318 ~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 397 (973)
++ .+..+++|+.|+|++|++++.
T Consensus 200 ~~---------------------------------------------------------~~~~l~~L~~L~Ls~N~l~~~ 222 (440)
T 3zyj_A 200 IP---------------------------------------------------------NLTPLIKLDELDLSGNHLSAI 222 (440)
T ss_dssp CC---------------------------------------------------------CCTTCSSCCEEECTTSCCCEE
T ss_pred cc---------------------------------------------------------ccCCCcccCEEECCCCccCcc
Confidence 21 245566777777777777777
Q ss_pred CCccccCCCCCCeEEccCcccCCCCCCccCCcCccceEEcCCCccccccccccccccccccccccCcccc
Q 039720 398 IPPAIGELRNLQYLGLVGNNIRGIIPDPIGNLTLLNVLQLGFNKLQGSIPSYLGKCQNLMQLSAPNNKLN 467 (973)
Q Consensus 398 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 467 (973)
.|..|.++++|+.|+|++|+|++..+..|.++++|++|+|++|++++..+..+..+++|+.|++++|.+.
T Consensus 223 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 223 RPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp CTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred ChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 7777777777777777777777777777777777777777777777666666777777777777777765
No 313
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=1.2e-27 Score=277.46 Aligned_cols=247 Identities=21% Similarity=0.254 Sum_probs=186.3
Q ss_pred cceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccC
Q 039720 160 IERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFK 239 (973)
Q Consensus 160 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 239 (973)
...++.+++.++ .+|..+. ++|++|+|++|+|++..|+.|.++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 455667777776 5676654 5788888888888877778888888888888888888877777888888888888888
Q ss_pred CccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccC-CcccccCcccccCcccccceecccccCCCC
Q 039720 240 NRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNE-NHFSGQVRINFNSLPNLSKLYLGRNNLGTR 318 (973)
Q Consensus 240 N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 318 (973)
|+++ .+|...+.++++|++|+|++|.|+...+..|.++++|++|+|++ |.++.+.+..|.++++|++|+|++|+++.+
T Consensus 133 n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~ 211 (452)
T 3zyi_A 133 NWLT-VIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM 211 (452)
T ss_dssp SCCS-BCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC
T ss_pred CcCC-ccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc
Confidence 8877 56666555788888888888888877777888888888888887 556656666788888888888887776532
Q ss_pred CCCChhhhhhhcccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCccccCCCccccCCCCcCEEEcccccCCCCC
Q 039720 319 TSTDLDFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEIRNLFNLNGLGLEYNQLTGTI 398 (973)
Q Consensus 319 ~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 398 (973)
+ .+..+++|+.|+|++|++++..
T Consensus 212 ~---------------------------------------------------------~~~~l~~L~~L~Ls~N~l~~~~ 234 (452)
T 3zyi_A 212 P---------------------------------------------------------NLTPLVGLEELEMSGNHFPEIR 234 (452)
T ss_dssp C---------------------------------------------------------CCTTCTTCCEEECTTSCCSEEC
T ss_pred c---------------------------------------------------------cccccccccEEECcCCcCcccC
Confidence 1 2445667777777777777777
Q ss_pred CccccCCCCCCeEEccCcccCCCCCCccCCcCccceEEcCCCccccccccccccccccccccccCcccc
Q 039720 399 PPAIGELRNLQYLGLVGNNIRGIIPDPIGNLTLLNVLQLGFNKLQGSIPSYLGKCQNLMQLSAPNNKLN 467 (973)
Q Consensus 399 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 467 (973)
|..|.++++|+.|+|++|++++..+..|..+++|++|+|++|++++..+..+..+++|+.|++++|.+.
T Consensus 235 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 235 PGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp GGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred cccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 777777777777777777777777777777777777777777777666666777777777777777765
No 314
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=3.4e-27 Score=272.71 Aligned_cols=242 Identities=23% Similarity=0.231 Sum_probs=137.7
Q ss_pred eeccCccccccCCCcCCCCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEeccccccc
Q 039720 69 LESQNIGGFLSPYIGNLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVG 148 (973)
Q Consensus 69 l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~ 148 (973)
.++.++. .+|..+. +.++.|+|++|++++..+..|.++++|++|+|++|.+++..|
T Consensus 50 c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~--------------------- 105 (440)
T 3zyj_A 50 CVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEI--------------------- 105 (440)
T ss_dssp CCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECG---------------------
T ss_pred eCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccCh---------------------
Confidence 3334443 3555443 567777777777776666667777777777777776664333
Q ss_pred chhhhhccccccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCC-CccccCCcccc
Q 039720 149 EIQAIIGNWLKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSEN-DFSGMFPLSVC 227 (973)
Q Consensus 149 ~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N-~l~~~~p~~~~ 227 (973)
..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++| .+....+..|.
T Consensus 106 ---~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~ 182 (440)
T 3zyj_A 106 ---GAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFE 182 (440)
T ss_dssp ---GGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTT
T ss_pred ---hhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhh
Confidence 33444455566666666665444445666666666666666666444455666666666666653 33322223344
Q ss_pred CCCCCcEEEccCCccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccc
Q 039720 228 NISSLDEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSK 307 (973)
Q Consensus 228 ~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 307 (973)
+++ +|++|+|++|.++. +| .+..+++|++|+|++|+|++..+..|.++++|++
T Consensus 183 ~l~-------------------------~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 235 (440)
T 3zyj_A 183 GLS-------------------------NLRYLNLAMCNLRE-IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQK 235 (440)
T ss_dssp TCS-------------------------SCCEEECTTSCCSS-CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred ccc-------------------------ccCeecCCCCcCcc-cc-ccCCCcccCEEECCCCccCccChhhhccCccCCE
Confidence 444 44444444444442 22 2445555555555555555555555555555555
Q ss_pred eecccccCCCCCCCChhhhhhhcccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCccccCCCccccCCCCcCEE
Q 039720 308 LYLGRNNLGTRTSTDLDFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEIRNLFNLNGL 387 (973)
Q Consensus 308 L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L 387 (973)
|+|++|+++. ..+..|..+++|+.|
T Consensus 236 L~L~~n~l~~-------------------------------------------------------~~~~~~~~l~~L~~L 260 (440)
T 3zyj_A 236 LWMIQSQIQV-------------------------------------------------------IERNAFDNLQSLVEI 260 (440)
T ss_dssp EECTTCCCCE-------------------------------------------------------ECTTSSTTCTTCCEE
T ss_pred EECCCCceeE-------------------------------------------------------EChhhhcCCCCCCEE
Confidence 5555554432 223445556667777
Q ss_pred EcccccCCCCCCccccCCCCCCeEEccCcccC
Q 039720 388 GLEYNQLTGTIPPAIGELRNLQYLGLVGNNIR 419 (973)
Q Consensus 388 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 419 (973)
+|++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 261 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 261 NLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp ECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred ECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 77777777777777777777777777777775
No 315
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=1.6e-29 Score=294.80 Aligned_cols=215 Identities=20% Similarity=0.185 Sum_probs=114.8
Q ss_pred hhhHhhhcCCccccCCCccccCCCCcCEEEcccccCCCCCCccccCCCCCCeEEccCcccCCCCCCccCCcCccceEEcC
Q 039720 359 TMTLIAMAGNQISGTIPPEIRNLFNLNGLGLEYNQLTGTIPPAIGELRNLQYLGLVGNNIRGIIPDPIGNLTLLNVLQLG 438 (973)
Q Consensus 359 ~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 438 (973)
.++.|++++|.+++..|..|..+++|++|+|++|.+++..| |..+++|++|+|++|.|++..+ .++|++|+++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECc
Confidence 44445555555555555555555566666666666554433 5555566666666665553221 2555566666
Q ss_pred CCccccccccccccccccccccccCcccccCCCccccccccccceeeccCCcccccCCcccc-cccccceeccccCcccc
Q 039720 439 FNKLQGSIPSYLGKCQNLMQLSAPNNKLNGTLPPQIFGITTLSKLLDLSENHLSGSIPLEVG-NLKSLVQLDISRNNFSN 517 (973)
Q Consensus 439 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~ls~N~l~~ 517 (973)
+|.+++..+. .+++|+.|++++|.+++..|..+..+..+ +.|+|++|.+++..|..+. .+++|+.|+|++|.+++
T Consensus 108 ~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~ 183 (487)
T 3oja_A 108 NNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRV-QYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD 183 (487)
T ss_dssp SSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSE-EEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE
T ss_pred CCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCC-CEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccc
Confidence 6665544433 23455555555555554444444444444 2555555555555555544 45556666666665554
Q ss_pred cccccccCccchhhhcccCcccccccccchhhhccCCeecCCCCccccccCCCCCCCCccceEeccCCcCc
Q 039720 518 EIPVTLSACTTLEYLLMQGNSFNGSIPQSLNALKSIKELDLSCNNLSGQIPIHLGNLPFLEYLNLSYNHFE 588 (973)
Q Consensus 518 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 588 (973)
..+ +..+++|+.|+|++|+|++ +|..+..+++|+.|+|++|+|+ .+|..+..+++|+.|++++|++.
T Consensus 184 ~~~--~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 184 VKG--QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFH 250 (487)
T ss_dssp EEC--CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCBC
T ss_pred ccc--cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCc-ccchhhccCCCCCEEEcCCCCCc
Confidence 321 2235555566666666553 3333555555666666666555 35555555555666666665555
No 316
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=2.8e-27 Score=256.61 Aligned_cols=256 Identities=21% Similarity=0.222 Sum_probs=152.5
Q ss_pred cEEEccCCccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceeccc
Q 039720 233 DEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGR 312 (973)
Q Consensus 233 ~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 312 (973)
+.++.+++.++ .+|..+ .++|++|++++|.+++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++
T Consensus 14 ~~~~c~~~~l~-~ip~~~---~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI---PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp CEEECCSSCCS-SCCTTC---CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred eEEEcCcCCcc-cCCcCC---CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 44555555555 566543 35777777777777776667777778888888888877777777777777777777777
Q ss_pred cc-CCCCCCCChhhhhhhcccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCccccCCCccccCCCCcCEEEccc
Q 039720 313 NN-LGTRTSTDLDFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEIRNLFNLNGLGLEY 391 (973)
Q Consensus 313 N~-l~~~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~ 391 (973)
|. ++. ..|..+..+++|++|+|++
T Consensus 90 n~~l~~-------------------------------------------------------~~~~~~~~l~~L~~L~l~~ 114 (285)
T 1ozn_A 90 NAQLRS-------------------------------------------------------VDPATFHGLGRLHTLHLDR 114 (285)
T ss_dssp CTTCCC-------------------------------------------------------CCTTTTTTCTTCCEEECTT
T ss_pred CCCccc-------------------------------------------------------cCHHHhcCCcCCCEEECCC
Confidence 65 432 2234455566677777777
Q ss_pred ccCCCCCCccccCCCCCCeEEccCcccCCCCCCccCCcCccceEEcCCCccccccccccccccccccccccCcccccCCC
Q 039720 392 NQLTGTIPPAIGELRNLQYLGLVGNNIRGIIPDPIGNLTLLNVLQLGFNKLQGSIPSYLGKCQNLMQLSAPNNKLNGTLP 471 (973)
Q Consensus 392 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 471 (973)
|++++..|..|..+++|++|++++|++++..+..|..+++|++|++++|++++..+..+..+++|+.|++++|++.+
T Consensus 115 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~--- 191 (285)
T 1ozn_A 115 CGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH--- 191 (285)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE---
T ss_pred CcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccc---
Confidence 77766666666667777777777777766555566666777777777776664444456666666555555555543
Q ss_pred ccccccccccceeeccCCcccccCCcccccccccceeccccCcccccccccccCccchhhhcccCcccccccccchhhhc
Q 039720 472 PQIFGITTLSKLLDLSENHLSGSIPLEVGNLKSLVQLDISRNNFSNEIPVTLSACTTLEYLLMQGNSFNGSIPQSLNALK 551 (973)
Q Consensus 472 ~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 551 (973)
..|..+..+++|+.|++++|++++..+..+..+++|+.|++++|++....+. ..-+.
T Consensus 192 ----------------------~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~-~~~~~ 248 (285)
T 1ozn_A 192 ----------------------VHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA-RPLWA 248 (285)
T ss_dssp ----------------------ECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGG-HHHHH
T ss_pred ----------------------cCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCc-HHHHH
Confidence 2333444444555555555555544444455555555555555555432221 11122
Q ss_pred cCCeecCCCCccccccCCCCCC
Q 039720 552 SIKELDLSCNNLSGQIPIHLGN 573 (973)
Q Consensus 552 ~L~~L~Ls~N~l~~~~p~~~~~ 573 (973)
.++.+..+.|.+....|..+..
T Consensus 249 ~l~~~~~~~~~~~c~~p~~l~g 270 (285)
T 1ozn_A 249 WLQKFRGSSSEVPCSLPQRLAG 270 (285)
T ss_dssp HHHHCCSEECCCBEEESGGGTT
T ss_pred HHHhcccccCccccCCchHhCC
Confidence 3344445555555555555433
No 317
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=1.3e-26 Score=275.47 Aligned_cols=269 Identities=25% Similarity=0.290 Sum_probs=220.7
Q ss_pred CCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccceeec
Q 039720 86 SFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSL 165 (973)
Q Consensus 86 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L 165 (973)
..++.|++++|+++ .+|..+. ++|++|+|++|.++ .+|. .+++|++|+|
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---------------------------~l~~L~~L~L 88 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---------------------------LPPELRTLEV 88 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---------------------------CCTTCCEEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---------------------------cCCCCCEEEc
Confidence 45899999999998 8888776 78999999999988 5554 1367888899
Q ss_pred cCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccCCccccC
Q 039720 166 YGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFKGS 245 (973)
Q Consensus 166 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 245 (973)
++|+++ .+|. .+++|++|+|++|++++ +|. .+++|++|++++|++++ +|.. +++|++|+|++|+++ .
T Consensus 89 s~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~-~ 155 (622)
T 3g06_A 89 SGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLA-S 155 (622)
T ss_dssp CSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-C
T ss_pred CCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCC-C
Confidence 999988 5676 67899999999999995 555 67899999999999996 4543 489999999999998 5
Q ss_pred CCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceecccccCCCCCCCChhh
Q 039720 246 LPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNLGTRTSTDLDF 325 (973)
Q Consensus 246 ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 325 (973)
+|. .+++|+.|++++|.|++ +| ..+++|++|+|++|+|+++.. .+++|+.|++++|.++.+
T Consensus 156 l~~----~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~l~~----~~~~L~~L~L~~N~l~~l------- 216 (622)
T 3g06_A 156 LPA----LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLASLPT----LPSELYKLWAYNNRLTSL------- 216 (622)
T ss_dssp CCC----CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSSC-------
T ss_pred cCC----ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCCCCC----ccchhhEEECcCCccccc-------
Confidence 664 35789999999999996 55 567899999999999986443 246788888887776431
Q ss_pred hhhhcccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCccccCCCccccCCCCcCEEEcccccCCCCCCccccCC
Q 039720 326 ITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEIRNLFNLNGLGLEYNQLTGTIPPAIGEL 405 (973)
Q Consensus 326 ~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 405 (973)
|. .+++|+.|+|++|+|++ +| ..+
T Consensus 217 -------------------------------------------------~~---~~~~L~~L~Ls~N~L~~-lp---~~l 240 (622)
T 3g06_A 217 -------------------------------------------------PA---LPSGLKELIVSGNRLTS-LP---VLP 240 (622)
T ss_dssp -------------------------------------------------CC---CCTTCCEEECCSSCCSC-CC---CCC
T ss_pred -------------------------------------------------CC---CCCCCCEEEccCCccCc-CC---CCC
Confidence 21 13679999999999996 55 456
Q ss_pred CCCCeEEccCcccCCCCCCccCCcCccceEEcCCCccccccccccccccccccccccCcccccCCCccccccc
Q 039720 406 RNLQYLGLVGNNIRGIIPDPIGNLTLLNVLQLGFNKLQGSIPSYLGKCQNLMQLSAPNNKLNGTLPPQIFGIT 478 (973)
Q Consensus 406 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~ 478 (973)
++|+.|+|++|+|+. +|. .+++|++|+|++|+|+ .+|..+..+++|+.|++++|.+++..|..+..+.
T Consensus 241 ~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 241 SELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp TTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 899999999999994 555 6789999999999999 7899999999999999999999987777655443
No 318
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=5.9e-29 Score=274.07 Aligned_cols=215 Identities=16% Similarity=0.115 Sum_probs=103.4
Q ss_pred eEEEEEeeccCccccccCCCcCCCCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEec
Q 039720 63 RVTKLDLESQNIGGFLSPYIGNLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVH 142 (973)
Q Consensus 63 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~ 142 (973)
+....+++.+++...+......+++|++|+|++|++++..|..|+++++|++|+|++|.+++..| +..+
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l--------- 79 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESL--------- 79 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTC---------
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhc---------
Confidence 34445555555544433334455666667777666665555666666666666666666654322 4444
Q ss_pred ccccccchhhhhccccccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccC
Q 039720 143 TNNLVGEIQAIIGNWLKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMF 222 (973)
Q Consensus 143 ~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~ 222 (973)
++|++|+|++|++++.. ..++|++|++++|++++..+. .+++|++|++++|++++..
T Consensus 80 ---------------~~L~~L~Ls~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~ 136 (317)
T 3o53_A 80 ---------------STLRTLDLNNNYVQELL-----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLR 136 (317)
T ss_dssp ---------------TTCCEEECCSSEEEEEE-----ECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGG
T ss_pred ---------------CCCCEEECcCCcccccc-----CCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCcc
Confidence 44444444444444211 124455555555555433222 2344555555555555444
Q ss_pred CccccCCCCCcEEEccCCccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCc
Q 039720 223 PLSVCNISSLDEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSL 302 (973)
Q Consensus 223 p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 302 (973)
+..+..+++|++|+|++|++++..|..++..+++|++|+|++|.|++. + ....+++|++|+|++|+|++..+. |..+
T Consensus 137 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l~~~-~~~l 213 (317)
T 3o53_A 137 DLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMGPE-FQSA 213 (317)
T ss_dssp GBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEECGG-GGGG
T ss_pred chhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCcchhh-hccc
Confidence 444444444444444444444333333322344555555555555433 1 122345555555555555433222 4444
Q ss_pred ccccceeccccc
Q 039720 303 PNLSKLYLGRNN 314 (973)
Q Consensus 303 ~~L~~L~L~~N~ 314 (973)
++|++|+|++|+
T Consensus 214 ~~L~~L~L~~N~ 225 (317)
T 3o53_A 214 AGVTWISLRNNK 225 (317)
T ss_dssp TTCSEEECTTSC
T ss_pred CcccEEECcCCc
Confidence 444444444443
No 319
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=2e-28 Score=269.88 Aligned_cols=260 Identities=18% Similarity=0.227 Sum_probs=164.3
Q ss_pred ccccccchhhhhccccccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccC
Q 039720 143 TNNLVGEIQAIIGNWLKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMF 222 (973)
Q Consensus 143 ~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~ 222 (973)
.+++...+...+..+++|++|+|++|.+++..|..|+++++|++|+|++|++++..+ |..+++|++|++++|++++..
T Consensus 19 ~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~ 96 (317)
T 3o53_A 19 DSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL 96 (317)
T ss_dssp TTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE
T ss_pred ccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc
Confidence 333333344444455566666666666665555556666666666666666654332 566666666666666655322
Q ss_pred CccccCCCCCcEEEccCCccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccc-cC
Q 039720 223 PLSVCNISSLDEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINF-NS 301 (973)
Q Consensus 223 p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~ 301 (973)
..++|++|++++|++++ ++.. .+++|++|++++|.+++..+..|..+++|++|+|++|++++..+..+ ..
T Consensus 97 -----~~~~L~~L~l~~n~l~~-~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 167 (317)
T 3o53_A 97 -----VGPSIETLHAANNNISR-VSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAAS 167 (317)
T ss_dssp -----ECTTCCEEECCSSCCSE-EEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGG
T ss_pred -----CCCCcCEEECCCCccCC-cCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhc
Confidence 12455555555555552 2211 23455555555555555555555555555555555555555444443 24
Q ss_pred cccccceecccccCCCCCCCChhhhhhhcccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCccccCCCccccCC
Q 039720 302 LPNLSKLYLGRNNLGTRTSTDLDFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEIRNL 381 (973)
Q Consensus 302 l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l 381 (973)
+++|++|+|++|.++. . + ....+
T Consensus 168 l~~L~~L~L~~N~l~~-------------------------------------------------------~-~-~~~~l 190 (317)
T 3o53_A 168 SDTLEHLNLQYNFIYD-------------------------------------------------------V-K-GQVVF 190 (317)
T ss_dssp TTTCCEEECTTSCCCE-------------------------------------------------------E-E-CCCCC
T ss_pred cCcCCEEECCCCcCcc-------------------------------------------------------c-c-ccccc
Confidence 5555555555554432 1 1 12247
Q ss_pred CCcCEEEcccccCCCCCCccccCCCCCCeEEccCcccCCCCCCccCCcCccceEEcCCCccc-ccccccccccccccccc
Q 039720 382 FNLNGLGLEYNQLTGTIPPAIGELRNLQYLGLVGNNIRGIIPDPIGNLTLLNVLQLGFNKLQ-GSIPSYLGKCQNLMQLS 460 (973)
Q Consensus 382 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~ 460 (973)
++|++|+|++|++++ +|..+..+++|++|+|++|+|+ .+|..+..+++|++|++++|+++ +.+|..+..+++|+.++
T Consensus 191 ~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~ 268 (317)
T 3o53_A 191 AKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVA 268 (317)
T ss_dssp TTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHH
T ss_pred ccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEE
Confidence 789999999999985 4555889999999999999998 56888899999999999999998 78888999999999999
Q ss_pred ccC-cccccCCCc
Q 039720 461 APN-NKLNGTLPP 472 (973)
Q Consensus 461 l~~-N~l~~~~p~ 472 (973)
+++ +.+.|..|.
T Consensus 269 l~~~~~l~~~~~~ 281 (317)
T 3o53_A 269 KQTVKKLTGQNEE 281 (317)
T ss_dssp HHHHHHHHSSSSC
T ss_pred CCCchhccCCchh
Confidence 984 456655443
No 320
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=2.5e-26 Score=246.91 Aligned_cols=219 Identities=21% Similarity=0.298 Sum_probs=156.8
Q ss_pred CCCCceeeeEeeCCCCeEEEEEeeccCccccccCCCcCCCCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCC
Q 039720 47 INLCQWTGVTCGHRHQRVTKLDLESQNIGGFLSPYIGNLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKI 126 (973)
Q Consensus 47 ~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~ 126 (973)
.++|.|.|+.|+-. ..++.+++++++++. +|..+. +.|++|+|++|++++..+..|+++++|++|+|++|.+++..
T Consensus 2 ~~~C~~~~~~C~c~-~~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~ 77 (270)
T 2o6q_A 2 EALCKKDGGVCSCN-NNKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLP 77 (270)
T ss_dssp CCCBGGGTCSBEEE-TTTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCC
T ss_pred CccCCCCCCCCEeC-CCCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeC
Confidence 47899999988632 245678888888874 666554 57888888888888666667888888888888888887333
Q ss_pred CcccccCCCccceEecccccccchhhhhccccccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCC
Q 039720 127 PTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLR 206 (973)
Q Consensus 127 p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~ 206 (973)
+..|.+ +++|++|+|++|++++..+..|.++++|++|++++|++++..+..|.+++
T Consensus 78 ~~~~~~------------------------l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 133 (270)
T 2o6q_A 78 AGIFKE------------------------LKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLT 133 (270)
T ss_dssp TTTTSS------------------------CTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCT
T ss_pred hhhhcC------------------------CCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCc
Confidence 333344 45566666666666655555566667777777777777666666667777
Q ss_pred ccceeccCCCCccccCCccccCCCCCcEEEccCCccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEc
Q 039720 207 NLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLEL 286 (973)
Q Consensus 207 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 286 (973)
+|++|+|++|++++..+..|..+++|++|+|++|+++ .+|...+.++++|++|+|++|.|++..+..|..+++|++|+|
T Consensus 134 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 212 (270)
T 2o6q_A 134 KLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLK-RVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQL 212 (270)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCHhHccCCcccceeEecCCcCc-EeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEe
Confidence 7777777777776655556677777777777777776 455555557888888888888888777777888999999999
Q ss_pred cCCccccc
Q 039720 287 NENHFSGQ 294 (973)
Q Consensus 287 s~N~l~~~ 294 (973)
++|.+...
T Consensus 213 ~~N~~~c~ 220 (270)
T 2o6q_A 213 QENPWDCT 220 (270)
T ss_dssp CSSCBCCS
T ss_pred cCCCeeCC
Confidence 99988743
No 321
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.93 E-value=9.7e-28 Score=283.46 Aligned_cols=186 Identities=15% Similarity=0.038 Sum_probs=132.4
Q ss_pred ccccccceeEEEEEECCCCcEEEEEEeeccc----------chhHHHHHHHHHHHHhc-CCCCceeEEeEeeecccCCCc
Q 039720 681 RIGKGSFGFVYKGNLGEDGMSVAVKVMNLDK----------KGATKSFVAECEALRNI-RHRNLIKIITICSSIDFKGAD 749 (973)
Q Consensus 681 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----------~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 749 (973)
..+.|+.|.+..++..-.|+.||+|++..+. ....+++.+|+++|+++ +|+||+++++++ +++.
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~-----ed~~ 315 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHG-----ENAQ 315 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEE-----ECSS
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEE-----EECC
Confidence 3667788888877777789999999997542 12235699999999999 699999999985 4468
Q ss_pred eEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhc
Q 039720 750 FKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 829 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~ 829 (973)
..|+||||++|++|.+++...+.... .+|+.||+.||+|+|++ |||||||||+|||++.+|.+||+|||+|+..
T Consensus 316 ~~yLVMEyv~G~~L~d~i~~~~~l~~---~~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~ 389 (569)
T 4azs_A 316 SGWLVMEKLPGRLLSDMLAAGEEIDR---EKILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTT 389 (569)
T ss_dssp EEEEEEECCCSEEHHHHHHTTCCCCH---HHHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESC
T ss_pred EEEEEEecCCCCcHHHHHHhCCCCCH---HHHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeC
Confidence 99999999999999999988776553 36899999999999999 9999999999999999999999999999865
Q ss_pred cCCCCccCCCCCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhCCCC
Q 039720 830 SHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTRRRP 886 (973)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg~~P 886 (973)
... .......+||+.|+|||++.+ .+..++|+||+|++++++.++..|
T Consensus 390 ~~~--------~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 390 PQD--------CSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp C-----------CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CCC--------CccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 432 233445789999999999875 456789999999998877655444
No 322
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=2.4e-26 Score=267.98 Aligned_cols=234 Identities=16% Similarity=0.156 Sum_probs=189.0
Q ss_pred EeeccCccccccCCCcCCCCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccc
Q 039720 68 DLESQNIGGFLSPYIGNLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLV 147 (973)
Q Consensus 68 ~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~ 147 (973)
++...++...+.......++|++|+|++|++++..|..|+.+++|++|+|++|.+++..| ++.+++|++|++++|.+.
T Consensus 16 ~~~~~~l~~~l~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~ 93 (487)
T 3oja_A 16 KVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQ 93 (487)
T ss_dssp SCCTTTHHHHHHTTSTTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEE
T ss_pred cCchhhhHHHHHHhcccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCC
Confidence 333344433333434455689999999999998888899999999999999999987655 889999999999999887
Q ss_pred cchhhhhccccccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCcccc
Q 039720 148 GEIQAIIGNWLKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVC 227 (973)
Q Consensus 148 ~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~ 227 (973)
+..+ .++|++|+|++|.+++..+.. +++|++|+|++|++++..|..|+++++|++|+|++|.+++..|..+.
T Consensus 94 ~l~~-----~~~L~~L~L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~ 165 (487)
T 3oja_A 94 ELLV-----GPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELA 165 (487)
T ss_dssp EEEE-----CTTCCEEECCSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGG
T ss_pred CCCC-----CCCcCEEECcCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHh
Confidence 5443 378999999999998766553 57789999999999988888899999999999999999988888876
Q ss_pred -CCCCCcEEEccCCccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCccccc
Q 039720 228 -NISSLDEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLS 306 (973)
Q Consensus 228 -~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 306 (973)
.+++|+.|+|++|.+++. |... .+++|++|+|++|.|++.. ..|..+++|++|+|++|+|++ +|..+..+++|+
T Consensus 166 ~~l~~L~~L~Ls~N~l~~~-~~~~--~l~~L~~L~Ls~N~l~~~~-~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~ 240 (487)
T 3oja_A 166 ASSDTLEHLNLQYNFIYDV-KGQV--VFAKLKTLDLSSNKLAFMG-PEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLE 240 (487)
T ss_dssp GGTTTCCEEECTTSCCCEE-ECCC--CCTTCCEEECCSSCCCEEC-GGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCC
T ss_pred hhCCcccEEecCCCccccc-cccc--cCCCCCEEECCCCCCCCCC-HhHcCCCCccEEEecCCcCcc-cchhhccCCCCC
Confidence 788999999999998844 4333 4888999999999998654 458888999999999999886 456688888888
Q ss_pred ceecccccCC
Q 039720 307 KLYLGRNNLG 316 (973)
Q Consensus 307 ~L~L~~N~l~ 316 (973)
.|++++|.+.
T Consensus 241 ~L~l~~N~l~ 250 (487)
T 3oja_A 241 HFDLRGNGFH 250 (487)
T ss_dssp EEECTTCCBC
T ss_pred EEEcCCCCCc
Confidence 8888888875
No 323
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=5.6e-29 Score=299.86 Aligned_cols=455 Identities=14% Similarity=0.117 Sum_probs=292.9
Q ss_pred CCceeeeEeeCCCCeEEEEEeeccCccccccC-CCcCCCCCCEEEccCCCCC---CCCCcc------------ccccCCC
Q 039720 49 LCQWTGVTCGHRHQRVTKLDLESQNIGGFLSP-YIGNLSFLRVINLANNSFH---GQIPKE------------VGRLFRL 112 (973)
Q Consensus 49 ~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~-~l~~l~~L~~L~L~~n~l~---~~~p~~------------~~~l~~L 112 (973)
|++|.++... ....+++++.. +..|. .+..+++|++|+|+++... +..|.. ...+++|
T Consensus 34 ck~W~~~~~~----~~~~l~~~~~~--~~~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L 107 (594)
T 2p1m_B 34 CKSWYEIERW----CRRKVFIGNCY--AVSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWL 107 (594)
T ss_dssp CHHHHHHHHH----HCCEEEESSTT--SSCHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTC
T ss_pred HHHHHHhhhh----hceEEeecccc--ccCHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCC
Confidence 3479988322 23344554322 22232 3567899999999998532 122222 3468899
Q ss_pred CEEeeecccCCCCCCcccc-cCCCccceEecccccccc--hhhhhccccccceeeccCCcccccCCCCC----CCCCccc
Q 039720 113 ETIVLSNNSFSGKIPTNLS-RCFNLIDFWVHTNNLVGE--IQAIIGNWLKIERLSLYGNQLTGQLPPSI----GNLSALQ 185 (973)
Q Consensus 113 ~~L~Ls~n~l~~~~p~~~~-~l~~L~~L~l~~n~~~~~--~~~~~~~l~~L~~L~L~~n~l~~~~p~~~----~~l~~L~ 185 (973)
++|+|++|.+++..+..+. .+++|++|++++|...+. ++..+.++++|++|+|++|.+++..+..+ ..+++|+
T Consensus 108 ~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~ 187 (594)
T 2p1m_B 108 EEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLV 187 (594)
T ss_dssp CEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCC
T ss_pred CeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCc
Confidence 9999999999887777776 689999999999944333 66667789999999999999876544433 3677999
Q ss_pred EEEccCCcCCCCCC-Cc----ccCCCccceeccCCC-CccccCCccccCCCCCcEEEccCC-------ccccCCCccccc
Q 039720 186 TFDIAGNKLDGRIP-DS----LGQLRNLNYLGTSEN-DFSGMFPLSVCNISSLDEAYLFKN-------RFKGSLPVCLGF 252 (973)
Q Consensus 186 ~L~L~~N~l~~~~p-~~----~~~L~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~N-------~l~~~ip~~~~~ 252 (973)
+|++++|. . .++ .. +.++++|++|++++| .+.+ +|..+..+++|++|++..+ .+. .++..+ .
T Consensus 188 ~L~l~~~~-~-~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~-~l~~~l-~ 262 (594)
T 2p1m_B 188 SLNISCLA-S-EVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYS-GLSVAL-S 262 (594)
T ss_dssp EEECTTCC-S-CCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHH-HHHHHH-H
T ss_pred EEEecccC-C-cCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHH-HHHHHH-h
Confidence 99999997 2 232 22 345699999999998 4444 7778888999999996544 333 244444 3
Q ss_pred CCCCCcEE-EccCCcccccCCccccCCCCCCEEEccCCcccccCc-ccccCcccccceecccccCCCCCCCChhhhhhhc
Q 039720 253 NLPKLTVL-VVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVR-INFNSLPNLSKLYLGRNNLGTRTSTDLDFITLLT 330 (973)
Q Consensus 253 ~l~~L~~L-~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~ 330 (973)
++++|+.| .+.+... +.++..+..+++|++|+|++|.+++... ..+..+++|++|++++| ++. ........
T Consensus 263 ~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~-----~~l~~l~~ 335 (594)
T 2p1m_B 263 GCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IED-----AGLEVLAS 335 (594)
T ss_dssp TCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHH-----HHHHHHHH
T ss_pred cCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCH-----HHHHHHHH
Confidence 78888888 4444333 2455556678889999999988764332 23567888999998887 331 12223334
Q ss_pred ccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCccccCCCccc-cCCCCcCEEEcccccCCCCCCcccc-CCCCC
Q 039720 331 NCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEI-RNLFNLNGLGLEYNQLTGTIPPAIG-ELRNL 408 (973)
Q Consensus 331 ~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L 408 (973)
.+++|++|++..+.-.| ....+.+++.....+ ..+++|+.|.++.|.+++..+..+. .+++|
T Consensus 336 ~~~~L~~L~L~~~~~~g----------------~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L 399 (594)
T 2p1m_B 336 TCKDLRELRVFPSEPFV----------------MEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNM 399 (594)
T ss_dssp HCTTCCEEEEECSCTTC----------------SSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTC
T ss_pred hCCCCCEEEEecCcccc----------------cccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCc
Confidence 57788888874421000 001112211111112 2356788887777777765555554 47788
Q ss_pred CeEEcc--C----cccCCCC-----CCccCCcCccceEEcCCCcccccccccccc-ccccccccccCcccccCCCccc-c
Q 039720 409 QYLGLV--G----NNIRGII-----PDPIGNLTLLNVLQLGFNKLQGSIPSYLGK-CQNLMQLSAPNNKLNGTLPPQI-F 475 (973)
Q Consensus 409 ~~L~L~--~----N~l~~~~-----p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~l~~N~l~~~~p~~~-~ 475 (973)
+.|+|+ + |.++... +..+..+++|+.|++++ .+++..+..+.. +++|+.|++++|.+++..+..+ .
T Consensus 400 ~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~ 478 (594)
T 2p1m_B 400 TRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLS 478 (594)
T ss_dssp CEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHH
T ss_pred ceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHh
Confidence 888887 4 4554221 11245677888888876 666555555555 7788888888888764433333 2
Q ss_pred ccccccceeeccCCcccccCCc-ccccccccceeccccCcccccccccc-cCccchhhhcccCccc
Q 039720 476 GITTLSKLLDLSENHLSGSIPL-EVGNLKSLVQLDISRNNFSNEIPVTL-SACTTLEYLLMQGNSF 539 (973)
Q Consensus 476 ~~~~l~~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l 539 (973)
.+..+ +.|+|++|.+++.... .+..+++|+.|++++|+++......+ ..+++|+...+..+.-
T Consensus 479 ~~~~L-~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~ 543 (594)
T 2p1m_B 479 GCDSL-RKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGA 543 (594)
T ss_dssp HCTTC-CEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSSC
T ss_pred cCCCc-CEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCCc
Confidence 23344 5888888888644333 34568899999999998864433334 4456666666665543
No 324
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=7e-25 Score=236.52 Aligned_cols=215 Identities=17% Similarity=0.200 Sum_probs=138.5
Q ss_pred cccCCCcCCCCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhcc
Q 039720 77 FLSPYIGNLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGN 156 (973)
Q Consensus 77 ~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~ 156 (973)
.+|..+. +.|++|+|++|++++..+..|+++++|++|+|++|.+++..+..+..+++|++|++++|.+.+..+..+.+
T Consensus 21 ~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 98 (276)
T 2z62_A 21 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 98 (276)
T ss_dssp SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTT
T ss_pred ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcC
Confidence 3555443 57899999999998766668889999999999999988666667777777777777777776666666666
Q ss_pred ccccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCC-CCCcccCCCccceeccCCCCccccCCccccCCCCCcEE
Q 039720 157 WLKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGR-IPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEA 235 (973)
Q Consensus 157 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 235 (973)
+++|++|++++|.+++..+..++++++|++|++++|++++. +|..|.++++|++|++++|++++..+..+..+.+|+
T Consensus 99 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~-- 176 (276)
T 2z62_A 99 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMP-- 176 (276)
T ss_dssp CTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCT--
T ss_pred CccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhcc--
Confidence 67777777777776655555666666777777777766642 466666666666666666666655555554444443
Q ss_pred EccCCccccCCCcccccCCCCCc-EEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceeccccc
Q 039720 236 YLFKNRFKGSLPVCLGFNLPKLT-VLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNN 314 (973)
Q Consensus 236 ~L~~N~l~~~ip~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 314 (973)
.|. .|++++|.+++..+..+.. .+|++|+|++|++++..+..|..+++|++|+|++|+
T Consensus 177 --------------------~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 235 (276)
T 2z62_A 177 --------------------LLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNP 235 (276)
T ss_dssp --------------------TCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSC
T ss_pred --------------------ccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCc
Confidence 111 4555555555433333332 255555555555555555555555555555565555
Q ss_pred CC
Q 039720 315 LG 316 (973)
Q Consensus 315 l~ 316 (973)
+.
T Consensus 236 ~~ 237 (276)
T 2z62_A 236 WD 237 (276)
T ss_dssp BC
T ss_pred cc
Confidence 54
No 325
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=8.9e-25 Score=235.72 Aligned_cols=225 Identities=20% Similarity=0.247 Sum_probs=152.8
Q ss_pred EEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccceeeccCCcc
Q 039720 91 INLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLYGNQL 170 (973)
Q Consensus 91 L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l 170 (973)
.+.++.+++ .+|..+. ++|++|+|++|.+++..+..|.++++| ++|+|++|++
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L------------------------~~L~l~~n~l 64 (276)
T 2z62_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPEL------------------------QVLDLSRCEI 64 (276)
T ss_dssp EECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTC------------------------SEEECTTCCC
T ss_pred EEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCC------------------------cEEECCCCcC
Confidence 344555565 6776663 578888888888875555556555555 4555555555
Q ss_pred cccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccCCcccc-CCCcc
Q 039720 171 TGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFKG-SLPVC 249 (973)
Q Consensus 171 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~ip~~ 249 (973)
++..+..|.++++|++|+|++|++++..+..|.++++|++|++++|.+++..+..+.++++|++|++++|++++ .+|..
T Consensus 65 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~ 144 (276)
T 2z62_A 65 QTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEY 144 (276)
T ss_dssp CEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGG
T ss_pred CccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchh
Confidence 44444455555555555555555554444555555555555555555555444455555555566666665553 24555
Q ss_pred cccCCCCCcEEEccCCcccccCCccccCCCCCC----EEEccCCcccccCcccccCcccccceecccccCCCCCCCChhh
Q 039720 250 LGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLE----WLELNENHFSGQVRINFNSLPNLSKLYLGRNNLGTRTSTDLDF 325 (973)
Q Consensus 250 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 325 (973)
+. ++++|++|+|++|.+++..+..|..+.+|+ +|++++|++++..+..+... +|++|+|++|+++.++..
T Consensus 145 ~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~-~L~~L~L~~n~l~~~~~~---- 218 (276)
T 2z62_A 145 FS-NLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLKELALDTNQLKSVPDG---- 218 (276)
T ss_dssp GG-GCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSC-CEEEEECCSSCCSCCCTT----
T ss_pred hc-cCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCC-cccEEECCCCceeecCHh----
Confidence 54 678888888888888877777787777777 99999999998877776654 899999999999987653
Q ss_pred hhhhcccccceeeccccccccCCCC
Q 039720 326 ITLLTNCSKLVKLGLVFNRFGGALP 350 (973)
Q Consensus 326 ~~~l~~l~~L~~L~l~~N~l~~~~p 350 (973)
.+..+++|+.|++++|++.+..|
T Consensus 219 --~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 219 --IFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp --TTTTCCSCCEEECCSSCBCCCTT
T ss_pred --HhcccccccEEEccCCcccccCC
Confidence 35678999999999999998765
No 326
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.92 E-value=6.1e-28 Score=290.75 Aligned_cols=223 Identities=16% Similarity=0.151 Sum_probs=119.7
Q ss_pred CEEEccCCCCCCCCCccccccCCCCEEeeecccCCC---CCCcc------------cccCCCccceEecccccccchhhh
Q 039720 89 RVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSG---KIPTN------------LSRCFNLIDFWVHTNNLVGEIQAI 153 (973)
Q Consensus 89 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~---~~p~~------------~~~l~~L~~L~l~~n~~~~~~~~~ 153 (973)
+.+++++.... ..+..+.++++|++|+|+++.... ..|.. ...+++|++|++++|.+.+..+..
T Consensus 46 ~~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~ 124 (594)
T 2p1m_B 46 RKVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLEL 124 (594)
T ss_dssp CEEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHH
T ss_pred eEEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHH
Confidence 45666655432 222346778999999999976432 22221 235667777888877777766666
Q ss_pred hc-cccccceeeccCC-ccccc-CCCCCCCCCcccEEEccCCcCCCCCCCccc----CCCccceeccCCCC--cccc-CC
Q 039720 154 IG-NWLKIERLSLYGN-QLTGQ-LPPSIGNLSALQTFDIAGNKLDGRIPDSLG----QLRNLNYLGTSEND--FSGM-FP 223 (973)
Q Consensus 154 ~~-~l~~L~~L~L~~n-~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~----~L~~L~~L~Ls~N~--l~~~-~p 223 (973)
+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .+++|++|++++|. ++.. ++
T Consensus 125 l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~ 204 (594)
T 2p1m_B 125 IAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALE 204 (594)
T ss_dssp HHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHH
T ss_pred HHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHH
Confidence 65 5777777777777 44422 333344677777777777776654444333 45577777777765 2111 11
Q ss_pred ccccCCCCCcEEEccCCccccCCCcccccCCCCCcEEEccC-------CcccccCCccccCCCCCCEE-EccCCcccccC
Q 039720 224 LSVCNISSLDEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQ-------NNLTGFLPQSLSNASKLEWL-ELNENHFSGQV 295 (973)
Q Consensus 224 ~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~-------N~l~~~~p~~~~~l~~L~~L-~Ls~N~l~~~~ 295 (973)
..+.++++|+.|++++|...+.+|..+. .+++|+.|+++. |.+.+ ++..+.++++|+.| .+.+... ...
T Consensus 205 ~l~~~~~~L~~L~L~~~~~~~~l~~~~~-~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~~-~~l 281 (594)
T 2p1m_B 205 RLVTRCPNLKSLKLNRAVPLEKLATLLQ-RAPQLEELGTGGYTAEVRPDVYSG-LSVALSGCKELRCLSGFWDAVP-AYL 281 (594)
T ss_dssp HHHHHCTTCCEEECCTTSCHHHHHHHHH-HCTTCSEEECSBCCCCCCHHHHHH-HHHHHHTCTTCCEEECCBTCCG-GGG
T ss_pred HHHHhCCCCcEEecCCCCcHHHHHHHHh-cCCcceEcccccccCccchhhHHH-HHHHHhcCCCcccccCCcccch-hhH
Confidence 1123345666666665522212443333 455666665332 22332 23345555555555 2322221 122
Q ss_pred cccccCcccccceecccccC
Q 039720 296 RINFNSLPNLSKLYLGRNNL 315 (973)
Q Consensus 296 ~~~~~~l~~L~~L~L~~N~l 315 (973)
+..+..+++|++|+|++|.+
T Consensus 282 ~~~~~~~~~L~~L~L~~~~l 301 (594)
T 2p1m_B 282 PAVYSVCSRLTTLNLSYATV 301 (594)
T ss_dssp GGGHHHHTTCCEEECTTCCC
T ss_pred HHHHHhhCCCCEEEccCCCC
Confidence 22333445555555555543
No 327
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=1.2e-23 Score=225.98 Aligned_cols=204 Identities=22% Similarity=0.225 Sum_probs=174.9
Q ss_pred CCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccceeecc
Q 039720 87 FLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLY 166 (973)
Q Consensus 87 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~ 166 (973)
..+.+++++|+++ .+|..+. ++|++|+|++|.+++..+ ..|.++++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~------------------------~~~~~l~~L~~L~l~ 69 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPS------------------------KAFHRLTKLRLLYLN 69 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCT------------------------TSSSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCH------------------------HHhcCCCCCCEEECC
Confidence 4567777777777 5676553 567777777777764333 344556778888888
Q ss_pred CCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccCCccccCC
Q 039720 167 GNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFKGSL 246 (973)
Q Consensus 167 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~i 246 (973)
+|+++...+..|.++++|++|+|++|++++..+..|.++++|++|++++|.+++..+..|.++++|++|+|++|+++ .+
T Consensus 70 ~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~ 148 (270)
T 2o6q_A 70 DNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SL 148 (270)
T ss_dssp SSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CC
T ss_pred CCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCC-cc
Confidence 88888655666799999999999999999777788999999999999999999988889999999999999999999 67
Q ss_pred CcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceecccccCCCC
Q 039720 247 PVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNLGTR 318 (973)
Q Consensus 247 p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 318 (973)
|...+..+++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..|..+++|+.|+|++|.+...
T Consensus 149 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 149 PKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred CHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 777666899999999999999988888899999999999999999998888899999999999999998764
No 328
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=5.5e-24 Score=230.63 Aligned_cols=204 Identities=25% Similarity=0.267 Sum_probs=120.6
Q ss_pred CcCCCCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccc
Q 039720 82 IGNLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIE 161 (973)
Q Consensus 82 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~ 161 (973)
++++++++++++++|+++ .+|..+. ++|++|+|++|.+++..|..|..+ ++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l------------------------~~L~ 58 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPY------------------------TRLT 58 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTC------------------------TTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcC------------------------CCCC
Confidence 445666666666666666 4555553 466666666666654444444444 4455
Q ss_pred eeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccCCc
Q 039720 162 RLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNR 241 (973)
Q Consensus 162 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 241 (973)
+|+|++|.+++. +.. +.+++|++|+|++|+++ .+|..+.++++|++|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 59 ~L~L~~n~l~~~-~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~ 135 (290)
T 1p9a_G 59 QLNLDRAELTKL-QVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNE 135 (290)
T ss_dssp EEECTTSCCCEE-ECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSC
T ss_pred EEECCCCccCcc-cCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCC
Confidence 555555555432 221 45555555555555555 455555555556666666666555555555566666666666666
Q ss_pred cccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceecccccCCC
Q 039720 242 FKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNLGT 317 (973)
Q Consensus 242 l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 317 (973)
++ .+|...+..+++|+.|+|++|+|++..+..|.++++|++|+|++|+|+. +|..+..+++|+.|+|++|.+..
T Consensus 136 l~-~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~-ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 136 LK-TLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYT-IPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CC-CCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCCCSEEECCSCCBCC
T ss_pred CC-ccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCc-cChhhcccccCCeEEeCCCCccC
Confidence 65 4455544466667777777777765555566667777777777777763 44455556677777777777654
No 329
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=2.5e-24 Score=231.49 Aligned_cols=150 Identities=21% Similarity=0.319 Sum_probs=79.7
Q ss_pred ccccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEE
Q 039720 157 WLKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAY 236 (973)
Q Consensus 157 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 236 (973)
+.++..+++..+.+... ..+..+++|+.|++++|.++ .++ .+..+++|++|++++|.+++. ..+.++++|++|+
T Consensus 18 ~~~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~ 91 (272)
T 3rfs_A 18 FAETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLI 91 (272)
T ss_dssp HHHHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEE
T ss_pred HHHHHHHHhcCcccccc--cccccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEE
Confidence 34556667777766543 23556777888888888776 333 477777777777777777642 2444444444444
Q ss_pred ccCCccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceecccc
Q 039720 237 LFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRN 313 (973)
Q Consensus 237 L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 313 (973)
|++|+++ .+|...+.++++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 92 L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n 167 (272)
T 3rfs_A 92 LTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYN 167 (272)
T ss_dssp CTTSCCC-CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCCCccC-ccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCC
Confidence 4444444 222222224444444444444444444444444444555555444444444333444444444444433
No 330
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=1.9e-24 Score=232.41 Aligned_cols=229 Identities=21% Similarity=0.268 Sum_probs=140.9
Q ss_pred CCCCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhcccccccee
Q 039720 84 NLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERL 163 (973)
Q Consensus 84 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L 163 (973)
.+..+..+++..+.+... ..+..+++|+.|++++|.++ .++ .++.+++|++|
T Consensus 17 ~~~~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L------------------------ 68 (272)
T 3rfs_A 17 AFAETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYL------------------------ 68 (272)
T ss_dssp HHHHHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEE------------------------
T ss_pred hHHHHHHHHhcCcccccc--cccccccceeeeeeCCCCcc-ccc-ccccCCCCcEE------------------------
Confidence 345566677777777643 33567888888888888876 333 35555555444
Q ss_pred eccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccCCccc
Q 039720 164 SLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFK 243 (973)
Q Consensus 164 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 243 (973)
+|++|.+++ + +.++++++|++|+|++|++++..+..|+++++|++|++++|++++..+..|.++++|++|++++|+++
T Consensus 69 ~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 146 (272)
T 3rfs_A 69 ALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQ 146 (272)
T ss_dssp ECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccC
Confidence 444444443 1 24455555555555555555444444555555555555555555544445555555555555555555
Q ss_pred cCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceecccccCCCCCCCCh
Q 039720 244 GSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNLGTRTSTDL 323 (973)
Q Consensus 244 ~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 323 (973)
.+|...+.++++|++|++++|.+++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|.+..
T Consensus 147 -~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~------ 219 (272)
T 3rfs_A 147 -SLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC------ 219 (272)
T ss_dssp -CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC------
T ss_pred -ccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc------
Confidence 3444433466777777777777776666667777777777777777777777777777777777777776643
Q ss_pred hhhhhhcccccceeeccccccccCCCChhhhhh
Q 039720 324 DFITLLTNCSKLVKLGLVFNRFGGALPHSIANL 356 (973)
Q Consensus 324 ~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l 356 (973)
.+++|+.+++..|.+.|.+|.+++.+
T Consensus 220 -------~~~~l~~l~~~~n~~~g~ip~~~~~~ 245 (272)
T 3rfs_A 220 -------TCPGIRYLSEWINKHSGVVRNSAGSV 245 (272)
T ss_dssp -------CTTTTHHHHHHHHHTGGGBBCTTSCB
T ss_pred -------cCcHHHHHHHHHHhCCCcccCccccc
Confidence 34456666666666666666666554
No 331
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=5.2e-24 Score=226.12 Aligned_cols=190 Identities=18% Similarity=0.224 Sum_probs=130.5
Q ss_pred CCCceeeeEeeCCCCeEEEEEeeccCccccccCCCcCCCCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCC
Q 039720 48 NLCQWTGVTCGHRHQRVTKLDLESQNIGGFLSPYIGNLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIP 127 (973)
Q Consensus 48 ~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p 127 (973)
+||.|.|++|... ...++++++++. .+|..+. +.|+.|+|++|++++..|..|+++++|++|+|++|.+++..|
T Consensus 3 ~Cp~~~gC~C~~~---~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 76 (251)
T 3m19_A 3 TCETVTGCTCNEG---KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSA 76 (251)
T ss_dssp -CHHHHSSEEEGG---GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCT
T ss_pred cCCCCCceEcCCC---CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCH
Confidence 5889999999643 335788888886 5676655 688999999999998878889999999999999999987777
Q ss_pred cccccCCCccceEecccccccchhhhhccccccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCc
Q 039720 128 TNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRN 207 (973)
Q Consensus 128 ~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~ 207 (973)
..|..+++|++|++++|++.+..+..+..+++|++|+|++|++++..+..|.++++|++|+|++|+|++..+..|+++++
T Consensus 77 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 156 (251)
T 3m19_A 77 GVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTN 156 (251)
T ss_dssp TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred hHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcC
Confidence 76777777766666666666655566666666666666666666544444566666666666666666544455666666
Q ss_pred cceeccCCCCccccCCccccCCCCCcEEEccCCccc
Q 039720 208 LNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFK 243 (973)
Q Consensus 208 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 243 (973)
|++|+|++|++++..+..|..+++|+.|+|++|.+.
T Consensus 157 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 192 (251)
T 3m19_A 157 LQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFD 192 (251)
T ss_dssp CCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred CCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCcee
Confidence 666666666666555555555555555555555554
No 332
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=1.5e-23 Score=227.11 Aligned_cols=206 Identities=24% Similarity=0.201 Sum_probs=180.2
Q ss_pred cccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccceeeccCCcccccCCCCCCCCCcc
Q 039720 105 EVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLYGNQLTGQLPPSIGNLSAL 184 (973)
Q Consensus 105 ~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 184 (973)
+++++++|+++++++|.++ .+|..+. +++++|+|++|.+++..|..|.++++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--------------------------~~l~~L~L~~N~l~~~~~~~~~~l~~L 57 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--------------------------KDTTILHLSENLLYTFSLATLMPYTRL 57 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--------------------------TTCCEEECTTSCCSEEEGGGGTTCTTC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--------------------------CCCCEEEcCCCcCCccCHHHhhcCCCC
Confidence 3677888889999888887 5665442 467889999999998888899999999
Q ss_pred cEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccCCccccCCCcccccCCCCCcEEEccC
Q 039720 185 QTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQ 264 (973)
Q Consensus 185 ~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~ 264 (973)
++|+|++|++++. +.. +.+++|++|+|++|+++ .+|..+..+++|++|+|++|+++ .+|...+.++++|++|+|++
T Consensus 58 ~~L~L~~n~l~~~-~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~l~~L~~L~L~~ 133 (290)
T 1p9a_G 58 TQLNLDRAELTKL-QVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLKG 133 (290)
T ss_dssp CEEECTTSCCCEE-ECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCC-CCCSSTTTTCTTCCEEECTT
T ss_pred CEEECCCCccCcc-cCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCc-ccCHHHHcCCCCCCEEECCC
Confidence 9999999999854 433 88999999999999998 67888999999999999999999 66666666899999999999
Q ss_pred CcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceecccccCCCCCCCChhhhhhhcccccceeecccccc
Q 039720 265 NNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNLGTRTSTDLDFITLLTNCSKLVKLGLVFNR 344 (973)
Q Consensus 265 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~N~ 344 (973)
|+|++..+..|..+++|++|+|++|+|+++.+..|..+++|++|+|++|+|+.++... ..+.+|+.+++++|.
T Consensus 134 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~-------~~~~~L~~l~L~~Np 206 (290)
T 1p9a_G 134 NELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGF-------FGSHLLPFAFLHGNP 206 (290)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTT-------TTTCCCSEEECCSCC
T ss_pred CCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhh-------cccccCCeEEeCCCC
Confidence 9999888888999999999999999999988889999999999999999999877643 345689999999999
Q ss_pred ccCC
Q 039720 345 FGGA 348 (973)
Q Consensus 345 l~~~ 348 (973)
+...
T Consensus 207 ~~C~ 210 (290)
T 1p9a_G 207 WLCN 210 (290)
T ss_dssp BCCS
T ss_pred ccCc
Confidence 8743
No 333
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=1.9e-25 Score=250.97 Aligned_cols=270 Identities=16% Similarity=0.131 Sum_probs=155.4
Q ss_pred EEeeccCccccccCCCcCCCCCCEEEccCCCCCCCCC----ccccccC-CCCEEeeecccCCCCCCcccccC-----CCc
Q 039720 67 LDLESQNIGGFLSPYIGNLSFLRVINLANNSFHGQIP----KEVGRLF-RLETIVLSNNSFSGKIPTNLSRC-----FNL 136 (973)
Q Consensus 67 l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p----~~~~~l~-~L~~L~Ls~n~l~~~~p~~~~~l-----~~L 136 (973)
.+|+.+++.|.+|..+...+.|++|||++|++++..+ ..|.+++ +|++|+|++|.+++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4566667766666666666667777777777765444 4556666 67777777777665555555543 445
Q ss_pred cceEecccccccchhhhhccccccceeeccCCcccccCCCCCCCC-CcccEEEccCCcCCCCCCCcc----cCC-Cccce
Q 039720 137 IDFWVHTNNLVGEIQAIIGNWLKIERLSLYGNQLTGQLPPSIGNL-SALQTFDIAGNKLDGRIPDSL----GQL-RNLNY 210 (973)
Q Consensus 137 ~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~~----~~L-~~L~~ 210 (973)
++|++++|.+.+..+..+... +..+ ++|++|+|++|++++..+..+ ..+ ++|++
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~--------------------l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~ 142 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKT--------------------LAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITS 142 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHH--------------------HHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCE
T ss_pred cEEECcCCcCChHHHHHHHHH--------------------HHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeE
Confidence 555555554444443332222 1112 445555555555543333222 221 35555
Q ss_pred eccCCCCccccC----CccccCCC-CCcEEEccCCccccCCCcccc---cCC-CCCcEEEccCCccccc----CCccccC
Q 039720 211 LGTSENDFSGMF----PLSVCNIS-SLDEAYLFKNRFKGSLPVCLG---FNL-PKLTVLVVAQNNLTGF----LPQSLSN 277 (973)
Q Consensus 211 L~Ls~N~l~~~~----p~~~~~l~-~L~~L~L~~N~l~~~ip~~~~---~~l-~~L~~L~Ls~N~l~~~----~p~~~~~ 277 (973)
|+|++|.+++.. +..+..++ +|++|+|++|++++..+..+. ... ++|++|+|++|.|++. ++..+..
T Consensus 143 L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~ 222 (362)
T 3goz_A 143 LNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSS 222 (362)
T ss_dssp EECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHH
T ss_pred EEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhc
Confidence 555555555322 22223333 556666666655543332221 133 4777777777777752 3445555
Q ss_pred -CCCCCEEEccCCcccccCc----ccccCcccccceecccccCCCCCCCChh-hhhhhcccccceeeccccccccCCCCh
Q 039720 278 -ASKLEWLELNENHFSGQVR----INFNSLPNLSKLYLGRNNLGTRTSTDLD-FITLLTNCSKLVKLGLVFNRFGGALPH 351 (973)
Q Consensus 278 -l~~L~~L~Ls~N~l~~~~~----~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~~~~l~~l~~L~~L~l~~N~l~~~~p~ 351 (973)
.++|++|+|++|+|++..+ ..+..+++|++|+|++|.+..+...... ....+.++++|+.|++++|++.+..+.
T Consensus 223 ~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~ 302 (362)
T 3goz_A 223 IPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSI 302 (362)
T ss_dssp SCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCH
T ss_pred CCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchH
Confidence 3578888888888876544 3456778888888888886665544222 234567788888899999888877666
Q ss_pred hhhhh
Q 039720 352 SIANL 356 (973)
Q Consensus 352 ~~~~l 356 (973)
.+.+.
T Consensus 303 ~~~~~ 307 (362)
T 3goz_A 303 PISNL 307 (362)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65543
No 334
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=2.2e-23 Score=219.54 Aligned_cols=204 Identities=14% Similarity=0.148 Sum_probs=130.5
Q ss_pred cccCCCcCCCCCCEEEccCCCCCCCCCccccccCCCCEEeeeccc-CCCCCCcccccCCCccceEecc-cccccchhhhh
Q 039720 77 FLSPYIGNLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNS-FSGKIPTNLSRCFNLIDFWVHT-NNLVGEIQAII 154 (973)
Q Consensus 77 ~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~-l~~~~p~~~~~l~~L~~L~l~~-n~~~~~~~~~~ 154 (973)
.+|. +. +.|++|+|++|++++..+..|+++++|++|+|++|. +++..+..|.++++|++|++++ |++.+..+
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~--- 98 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDP--- 98 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECT---
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCH---
Confidence 4555 33 378999999999986666688899999999999997 7644444566665555555554 44444333
Q ss_pred ccccccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccc---eeccCCC-CccccCCccccCCC
Q 039720 155 GNWLKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLN---YLGTSEN-DFSGMFPLSVCNIS 230 (973)
Q Consensus 155 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~---~L~Ls~N-~l~~~~p~~~~~l~ 230 (973)
..|.++++|++|++++|++++ +|+ |..+++|+ +|++++| .+++..+..|.+++
T Consensus 99 ---------------------~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~ 155 (239)
T 2xwt_C 99 ---------------------DALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLC 155 (239)
T ss_dssp ---------------------TSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTB
T ss_pred ---------------------HHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchh
Confidence 444455555555555555542 443 44444444 5555555 55544445555555
Q ss_pred CCc-EEEccCCccccCCCcccccCCCCCcEEEccCCc-ccccCCccccCC-CCCCEEEccCCcccccCcccccCcccccc
Q 039720 231 SLD-EAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNN-LTGFLPQSLSNA-SKLEWLELNENHFSGQVRINFNSLPNLSK 307 (973)
Q Consensus 231 ~L~-~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 307 (973)
+|+ +|++++|+++ .+|...+.. ++|+.|+|++|. +++..+..|.++ ++|++|+|++|++++..+. .+++|+.
T Consensus 156 ~L~~~L~l~~n~l~-~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~ 230 (239)
T 2xwt_C 156 NETLTLKLYNNGFT-SVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKE 230 (239)
T ss_dssp SSEEEEECCSCCCC-EECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSE
T ss_pred cceeEEEcCCCCCc-ccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCce
Confidence 555 5555555555 566655533 678888888884 776667778888 8888888888888765544 5667777
Q ss_pred eeccccc
Q 039720 308 LYLGRNN 314 (973)
Q Consensus 308 L~L~~N~ 314 (973)
|+++++.
T Consensus 231 L~l~~~~ 237 (239)
T 2xwt_C 231 LIARNTW 237 (239)
T ss_dssp EECTTC-
T ss_pred eeccCcc
Confidence 7777653
No 335
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=1.7e-23 Score=220.37 Aligned_cols=203 Identities=22% Similarity=0.218 Sum_probs=168.4
Q ss_pred CCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccceeeccCCc-ccccCCCCCC
Q 039720 101 QIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLYGNQ-LTGQLPPSIG 179 (973)
Q Consensus 101 ~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~-l~~~~p~~~~ 179 (973)
.+|. +. ++|++|+|++|++++..+..| .++++|++|++++|. +++..+..|.
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~------------------------~~l~~L~~L~l~~n~~l~~i~~~~f~ 77 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAF------------------------SNLPNISRIYVSIDVTLQQLESHSFY 77 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTT------------------------TTCTTCCEEEEECCSSCCEECTTTEE
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHc------------------------cCCCCCcEEeCCCCCCcceeCHhHcC
Confidence 5666 43 378888888888874333344 445677888888886 7766666899
Q ss_pred CCCcccEEEccC-CcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCc---EEEccCC-ccccCCCcccccCC
Q 039720 180 NLSALQTFDIAG-NKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLD---EAYLFKN-RFKGSLPVCLGFNL 254 (973)
Q Consensus 180 ~l~~L~~L~L~~-N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~---~L~L~~N-~l~~~ip~~~~~~l 254 (973)
++++|++|++++ |++++..+..|.++++|++|++++|++++ +|. |..+++|+ +|++++| +++ .+|...+.++
T Consensus 78 ~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~-~i~~~~~~~l 154 (239)
T 2xwt_C 78 NLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMT-SIPVNAFQGL 154 (239)
T ss_dssp SCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCC-EECTTTTTTT
T ss_pred CCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchh-hcCcccccch
Confidence 999999999998 99997777899999999999999999997 665 88999998 9999999 888 6777766689
Q ss_pred CCCc-EEEccCCcccccCCccccCCCCCCEEEccCCc-ccccCcccccCc-ccccceecccccCCCCCCCChhhhhhhcc
Q 039720 255 PKLT-VLVVAQNNLTGFLPQSLSNASKLEWLELNENH-FSGQVRINFNSL-PNLSKLYLGRNNLGTRTSTDLDFITLLTN 331 (973)
Q Consensus 255 ~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~~~~l~~ 331 (973)
++|+ +|++++|.++.+.+..|.. ++|++|+|++|+ ++++.+..|.++ ++|++|+|++|+++.++.. .
T Consensus 155 ~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---------~ 224 (239)
T 2xwt_C 155 CNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---------G 224 (239)
T ss_dssp BSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---------T
T ss_pred hcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---------H
Confidence 9999 9999999999555555655 899999999995 998888999999 9999999999999987654 3
Q ss_pred cccceeeccccc
Q 039720 332 CSKLVKLGLVFN 343 (973)
Q Consensus 332 l~~L~~L~l~~N 343 (973)
+++|+.|+++++
T Consensus 225 ~~~L~~L~l~~~ 236 (239)
T 2xwt_C 225 LEHLKELIARNT 236 (239)
T ss_dssp CTTCSEEECTTC
T ss_pred hccCceeeccCc
Confidence 567888888765
No 336
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=1.8e-23 Score=229.41 Aligned_cols=226 Identities=15% Similarity=0.135 Sum_probs=170.1
Q ss_pred CCCEEEccCCCCCCCC-Cc--cccccCCCCEEeeecccCCCCCCccc--ccCCCccceEecccccccchh----hhhccc
Q 039720 87 FLRVINLANNSFHGQI-PK--EVGRLFRLETIVLSNNSFSGKIPTNL--SRCFNLIDFWVHTNNLVGEIQ----AIIGNW 157 (973)
Q Consensus 87 ~L~~L~L~~n~l~~~~-p~--~~~~l~~L~~L~Ls~n~l~~~~p~~~--~~l~~L~~L~l~~n~~~~~~~----~~~~~l 157 (973)
.++.|.+.++.++... .. .+..+++|++|+|++|.+++.+|..+ ..+++|++|++++|.+.+..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 4788888888775211 10 12346779999999999999999888 889999999999999887544 455678
Q ss_pred cccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCC--C--CCcccCCCccceeccCCCCccccCC--c-cccCCC
Q 039720 158 LKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGR--I--PDSLGQLRNLNYLGTSENDFSGMFP--L-SVCNIS 230 (973)
Q Consensus 158 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~--p~~~~~L~~L~~L~Ls~N~l~~~~p--~-~~~~l~ 230 (973)
++|++|+|++|++++..|..|+++++|++|+|++|++.+. + +..++++++|++|+|++|+++...+ . .+.+++
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~ 224 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGV 224 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTC
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCC
Confidence 8999999999999888888899999999999999987642 2 3345788899999999998863221 1 246778
Q ss_pred CCcEEEccCCccccCCCcccccC--CCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccce
Q 039720 231 SLDEAYLFKNRFKGSLPVCLGFN--LPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKL 308 (973)
Q Consensus 231 ~L~~L~L~~N~l~~~ip~~~~~~--l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 308 (973)
+|++|+|++|++.+.+|..++.- +++|++|+|++|.|+ .+|..+. ++|++|+|++|+|++. |. +..+++|+.|
T Consensus 225 ~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L 299 (310)
T 4glp_A 225 QPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNL 299 (310)
T ss_dssp CCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCE
T ss_pred CCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEE
Confidence 88888888888886667665521 268888888888888 4566654 6888888888888865 22 6777888888
Q ss_pred ecccccCCC
Q 039720 309 YLGRNNLGT 317 (973)
Q Consensus 309 ~L~~N~l~~ 317 (973)
+|++|+|+.
T Consensus 300 ~L~~N~l~~ 308 (310)
T 4glp_A 300 TLDGNPFLV 308 (310)
T ss_dssp ECSSTTTSC
T ss_pred ECcCCCCCC
Confidence 888887753
No 337
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=2.7e-25 Score=247.26 Aligned_cols=269 Identities=17% Similarity=0.223 Sum_probs=158.9
Q ss_pred CCceeeeEeeCCCCeEEEEEeeccCccccccCCCcCC--CCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCC-
Q 039720 49 LCQWTGVTCGHRHQRVTKLDLESQNIGGFLSPYIGNL--SFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGK- 125 (973)
Q Consensus 49 ~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l--~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~- 125 (973)
|.+|.++.|+.. .++.+|++++.+. +..++.+ +.++.|++++|.+++..|. +.++++|++|+|++|.+++.
T Consensus 36 c~~W~~~~~~~~--~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~ 109 (336)
T 2ast_B 36 CKRWYRLASDES--LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVST 109 (336)
T ss_dssp CHHHHHHHTCST--TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHH
T ss_pred HHHHHHHhcCch--hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHH
Confidence 447999988743 4667788777664 3445555 7778888888877765554 55677777777777777644
Q ss_pred CCcccccCCCccceEecccccccchhhhhccccccceeeccCC-cccc-cCCCCCCCCCcccEEEccCC-cCCCC-CCCc
Q 039720 126 IPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLYGN-QLTG-QLPPSIGNLSALQTFDIAGN-KLDGR-IPDS 201 (973)
Q Consensus 126 ~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n-~l~~-~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~ 201 (973)
+|..+..+++|++|++++|.+.+..+..+..+++|++|+|++| .+++ .++..+.++++|++|++++| ++++. ++..
T Consensus 110 ~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~ 189 (336)
T 2ast_B 110 LHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVA 189 (336)
T ss_dssp HHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHH
T ss_pred HHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHH
Confidence 5555666666666666666655555555555556666666555 3443 13444445555555555555 54422 3344
Q ss_pred ccCCC-ccceeccCCCCccccCCccccCCCCCcEEEccCCccc-cCCCcccccCCCCCcEEEccCCc-ccccCCccccCC
Q 039720 202 LGQLR-NLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFK-GSLPVCLGFNLPKLTVLVVAQNN-LTGFLPQSLSNA 278 (973)
Q Consensus 202 ~~~L~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~ip~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l 278 (973)
+..++ +|++|++++|.+ .++ +.+|..+. ++++|++|++++|. +++..+..+.++
T Consensus 190 ~~~l~~~L~~L~l~~~~~----------------------~~~~~~l~~~~~-~~~~L~~L~l~~~~~l~~~~~~~l~~l 246 (336)
T 2ast_B 190 VAHVSETITQLNLSGYRK----------------------NLQKSDLSTLVR-RCPNLVHLDLSDSVMLKNDCFQEFFQL 246 (336)
T ss_dssp HHHSCTTCCEEECCSCGG----------------------GSCHHHHHHHHH-HCTTCSEEECTTCTTCCGGGGGGGGGC
T ss_pred HHhcccCCCEEEeCCCcc----------------------cCCHHHHHHHHh-hCCCCCEEeCCCCCcCCHHHHHHHhCC
Confidence 44455 555555555521 222 23333332 56667777777776 555566667777
Q ss_pred CCCCEEEccCCc-ccccCcccccCcccccceecccccCCCCCCCChhhhhhhcccccceeeccccccccCCCChhhhh
Q 039720 279 SKLEWLELNENH-FSGQVRINFNSLPNLSKLYLGRNNLGTRTSTDLDFITLLTNCSKLVKLGLVFNRFGGALPHSIAN 355 (973)
Q Consensus 279 ~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~ 355 (973)
++|++|+|++|. +.......+..+++|++|+|++| ++ ...+.. +. ..+..|+++.|++++..|..++.
T Consensus 247 ~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~---~~~~~~---l~--~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 247 NYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VP---DGTLQL---LK--EALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp TTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SC---TTCHHH---HH--HHSTTSEESCCCSCCTTCSSCSS
T ss_pred CCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cC---HHHHHH---HH--hhCcceEEecccCccccCCcccc
Confidence 777777777774 33222235666777777777777 32 222221 11 23556667778888777776664
No 338
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.89 E-value=4e-24 Score=251.24 Aligned_cols=191 Identities=17% Similarity=0.146 Sum_probs=143.7
Q ss_pred CcCCccccccceeEEEEEECCCCcEEEEEEeecccc--------hhHHHHHHHHHHHHhcCCCCceeEEeEeeecccCCC
Q 039720 677 SSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKK--------GATKSFVAECEALRNIRHRNLIKIITICSSIDFKGA 748 (973)
Q Consensus 677 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 748 (973)
...+.||+|+||+||+|+. .+..+|+|+...... ...+++.+|++++++++||||+++..++.. .
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~-----~ 411 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVD-----L 411 (540)
T ss_dssp ---------CCEEEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEE-----T
T ss_pred CCCCEEeeCCCEEEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEe-----C
Confidence 4456899999999999965 688999998753221 123458999999999999999954444332 2
Q ss_pred ceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchh
Q 039720 749 DFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 828 (973)
Q Consensus 749 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~ 828 (973)
+..++||||+++++|.+++.. +..++.|+++||+|||++ +|+||||||+|||++. .+||+|||+|+.
T Consensus 412 ~~~~lVmE~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~ 478 (540)
T 3en9_A 412 DNKRIMMSYINGKLAKDVIED--------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKI 478 (540)
T ss_dssp TTTEEEEECCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEE
T ss_pred CccEEEEECCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEE
Confidence 456999999999999999876 468999999999999999 9999999999999998 999999999987
Q ss_pred ccCCCCccCCCCCcccccccccccccCcccccC--CCCCcccchHHHHHHHHHHHhCCCCCC
Q 039720 829 LSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMG--GDLSMTGDVYSFGILLLEMFTRRRPTD 888 (973)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlG~ll~elltg~~Pf~ 888 (973)
......... ..........||+.|+|||++.. ..|+..+|+|+..+-..+-+.++.+|.
T Consensus 479 ~~~~~~~~~-~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 479 SNLDEDKAV-DLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp CCCHHHHHH-HHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred CCCcccccc-chhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 643110000 00001235679999999999887 678888999999999888888887764
No 339
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=3e-23 Score=227.68 Aligned_cols=224 Identities=19% Similarity=0.166 Sum_probs=188.2
Q ss_pred eEEEEEeeccCccccccC---CCcCCCCCCEEEccCCCCCCCCCccc--cccCCCCEEeeecccCCCCCC----cccccC
Q 039720 63 RVTKLDLESQNIGGFLSP---YIGNLSFLRVINLANNSFHGQIPKEV--GRLFRLETIVLSNNSFSGKIP----TNLSRC 133 (973)
Q Consensus 63 ~v~~l~l~~~~l~g~~~~---~l~~l~~L~~L~L~~n~l~~~~p~~~--~~l~~L~~L~Ls~n~l~~~~p----~~~~~l 133 (973)
++..+.+.+..+...--. ....++.|++|+|++|++++.+|..+ +.+++|++|+|++|.+++..| ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 356666666655331111 12245679999999999999999998 999999999999999998766 445679
Q ss_pred CCccceEecccccccchhhhhccccccceeeccCCccccc--C--CCCCCCCCcccEEEccCCcCCCCCCC----cccCC
Q 039720 134 FNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLYGNQLTGQ--L--PPSIGNLSALQTFDIAGNKLDGRIPD----SLGQL 205 (973)
Q Consensus 134 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~--~--p~~~~~l~~L~~L~L~~N~l~~~~p~----~~~~L 205 (973)
++|++|++++|++.+..+..++.+++|++|+|++|++.+. + +..++++++|++|+|++|+++ .++. .++++
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcC
Confidence 9999999999999999999999999999999999998642 2 344578999999999999997 4444 35788
Q ss_pred CccceeccCCCCccccCCccccCC---CCCcEEEccCCccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCC
Q 039720 206 RNLNYLGTSENDFSGMFPLSVCNI---SSLDEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLE 282 (973)
Q Consensus 206 ~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 282 (973)
++|++|+|++|++++..|..+..+ ++|++|+|++|+++ .+|..++ ++|++|+|++|+|++. |. +..+++|+
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~---~~L~~L~Ls~N~l~~~-~~-~~~l~~L~ 297 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP---AKLRVLDLSSNRLNRA-PQ-PDELPEVD 297 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC---SCCSCEECCSCCCCSC-CC-TTSCCCCS
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc---CCCCEEECCCCcCCCC-ch-hhhCCCcc
Confidence 999999999999999888887777 69999999999999 8898775 7999999999999975 44 78899999
Q ss_pred EEEccCCcccc
Q 039720 283 WLELNENHFSG 293 (973)
Q Consensus 283 ~L~Ls~N~l~~ 293 (973)
+|+|++|+|+.
T Consensus 298 ~L~L~~N~l~~ 308 (310)
T 4glp_A 298 NLTLDGNPFLV 308 (310)
T ss_dssp CEECSSTTTSC
T ss_pred EEECcCCCCCC
Confidence 99999999974
No 340
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=1.1e-24 Score=244.56 Aligned_cols=236 Identities=17% Similarity=0.164 Sum_probs=152.7
Q ss_pred CeEEEEEeeccCcccccc----CCCcCCC-CCCEEEccCCCCCCCCCcccccc-----CCCCEEeeecccCCCCCCcccc
Q 039720 62 QRVTKLDLESQNIGGFLS----PYIGNLS-FLRVINLANNSFHGQIPKEVGRL-----FRLETIVLSNNSFSGKIPTNLS 131 (973)
Q Consensus 62 ~~v~~l~l~~~~l~g~~~----~~l~~l~-~L~~L~L~~n~l~~~~p~~~~~l-----~~L~~L~Ls~n~l~~~~p~~~~ 131 (973)
..++.|||+++.+++..+ ..+..++ +|++|+|++|++++..+..++.+ ++|++|+|++|.+++..+..+.
T Consensus 22 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 101 (362)
T 3goz_A 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELV 101 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHH
Confidence 358999999999987665 5677888 89999999999998888888886 9999999999999977776555
Q ss_pred cC-----CCccceEecccccccchhhhhccc-----cccceeeccCCcccccC----CCCCCCCC-cccEEEccCCcCCC
Q 039720 132 RC-----FNLIDFWVHTNNLVGEIQAIIGNW-----LKIERLSLYGNQLTGQL----PPSIGNLS-ALQTFDIAGNKLDG 196 (973)
Q Consensus 132 ~l-----~~L~~L~l~~n~~~~~~~~~~~~l-----~~L~~L~L~~n~l~~~~----p~~~~~l~-~L~~L~L~~N~l~~ 196 (973)
.. ++|++|++++|.+.+..+..+... ++|++|+|++|++++.. +..+..+. +|++|+|++|++++
T Consensus 102 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~ 181 (362)
T 3goz_A 102 KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLAS 181 (362)
T ss_dssp HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCch
Confidence 43 677777777777766655544332 46666666666666322 22223333 56666666666654
Q ss_pred CCCCccc----CC-CccceeccCCCCccccCCccccCCCCCcEEEccCCccccCCCcccccCCCCCcEEEccCCcccccC
Q 039720 197 RIPDSLG----QL-RNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFL 271 (973)
Q Consensus 197 ~~p~~~~----~L-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~ 271 (973)
..+..+. .+ ++|++|+|++|.|++.... .++..+....++|++|+|++|.|++..
T Consensus 182 ~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~--------------------~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 182 KNCAELAKFLASIPASVTSLDLSANLLGLKSYA--------------------ELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp SCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHH--------------------HHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred hhHHHHHHHHHhCCCCCCEEECCCCCCChhHHH--------------------HHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 4443332 22 3555555555555531110 133333322346666666666666543
Q ss_pred C----ccccCCCCCCEEEccCCcccccC-------cccccCcccccceecccccCCC
Q 039720 272 P----QSLSNASKLEWLELNENHFSGQV-------RINFNSLPNLSKLYLGRNNLGT 317 (973)
Q Consensus 272 p----~~~~~l~~L~~L~Ls~N~l~~~~-------~~~~~~l~~L~~L~L~~N~l~~ 317 (973)
+ ..+..+++|++|+|++|.+.+.. +..+..+++|+.|+|++|++..
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~ 298 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHP 298 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCG
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCC
Confidence 3 33456677777777777744332 2356677778888888887764
No 341
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=7.8e-24 Score=235.44 Aligned_cols=224 Identities=18% Similarity=0.244 Sum_probs=162.6
Q ss_pred CCCEEEccCCCCCCCCCcccccc--CCCCEEeeecccCCCCCCcccccCCCccceEecccccccc-hhhhhcccccccee
Q 039720 87 FLRVINLANNSFHGQIPKEVGRL--FRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGE-IQAIIGNWLKIERL 163 (973)
Q Consensus 87 ~L~~L~L~~n~l~~~~p~~~~~l--~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~-~~~~~~~l~~L~~L 163 (973)
.++.|++++|.+. |..++++ +++++|++++|.+.+..|. +..+++|++|++++|.+.+. ++..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 4788999999886 5667777 8999999999999866554 55677777777777777655 66677777777777
Q ss_pred eccCCcccccCCCCCCCCCcccEEEccCC-cCCCC-CCCcccCCCccceeccCCC-CccccCCccccCCCCCcEEEccCC
Q 039720 164 SLYGNQLTGQLPPSIGNLSALQTFDIAGN-KLDGR-IPDSLGQLRNLNYLGTSEN-DFSGMFPLSVCNISSLDEAYLFKN 240 (973)
Q Consensus 164 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~L~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~N 240 (973)
+|++|.+++..|..|+.+++|++|+|++| .+++. ++..+.++++|++|++++| .+++.
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~------------------- 184 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEK------------------- 184 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHH-------------------
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChH-------------------
Confidence 77777666656666666666666666666 45431 3444555555555555555 44421
Q ss_pred ccccCCCcccccCCC-CCcEEEccCC--ccc-ccCCccccCCCCCCEEEccCCc-ccccCcccccCcccccceecccccC
Q 039720 241 RFKGSLPVCLGFNLP-KLTVLVVAQN--NLT-GFLPQSLSNASKLEWLELNENH-FSGQVRINFNSLPNLSKLYLGRNNL 315 (973)
Q Consensus 241 ~l~~~ip~~~~~~l~-~L~~L~Ls~N--~l~-~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~L~~N~l 315 (973)
.++..+. .++ +|++|++++| .++ +.+|..+.++++|++|+|++|. +++..+..+..+++|++|+|++|.
T Consensus 185 ----~~~~~~~-~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~- 258 (336)
T 2ast_B 185 ----HVQVAVA-HVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY- 258 (336)
T ss_dssp ----HHHHHHH-HSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT-
T ss_pred ----HHHHHHH-hcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC-
Confidence 1333333 688 9999999999 555 4567788899999999999999 787778899999999999999996
Q ss_pred CCCCCCChhhhhhhcccccceeeccccc
Q 039720 316 GTRTSTDLDFITLLTNCSKLVKLGLVFN 343 (973)
Q Consensus 316 ~~~~~~~~~~~~~l~~l~~L~~L~l~~N 343 (973)
.+.. ..+..+.++++|+.|++++|
T Consensus 259 -~~~~---~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 259 -DIIP---ETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp -TCCG---GGGGGGGGCTTCCEEECTTS
T ss_pred -CCCH---HHHHHHhcCCCCCEEeccCc
Confidence 2221 22345678999999999988
No 342
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.88 E-value=2.3e-23 Score=244.40 Aligned_cols=214 Identities=20% Similarity=0.295 Sum_probs=142.5
Q ss_pred CCCCCCCCCCCC-----ceeee-EeeCCCCeEEEEEeeccCccccccCCCcCCCCCCEEEccCCCCCCCCCccccccCCC
Q 039720 39 VTKSWNNSINLC-----QWTGV-TCGHRHQRVTKLDLESQNIGGFLSPYIGNLSFLRVINLANNSFHGQIPKEVGRLFRL 112 (973)
Q Consensus 39 ~l~sw~~~~~~c-----~w~gv-~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 112 (973)
.+.+|..+.++| .|.|+ .|.. .+++.|+|+++++++ +|+.++ ++|++|+|++|+|+ .+| +.+++|
T Consensus 32 ~l~~W~~~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L 102 (571)
T 3cvr_A 32 AWDKWEKQALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASL 102 (571)
T ss_dssp HHHHHHTTCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTC
T ss_pred HHHHHhccCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCC
Confidence 466787667778 79999 7864 368899999999987 787664 88999999999998 788 457899
Q ss_pred CEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccceeeccCCcccccCCCCCCCCCcccEEEccCC
Q 039720 113 ETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGN 192 (973)
Q Consensus 113 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N 192 (973)
++|+|++|.|++ +|. +++ +|++|++++|++.+ +|. .+++|++|+|++|
T Consensus 103 ~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-------------------------lp~---~l~~L~~L~Ls~N 150 (571)
T 3cvr_A 103 EYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-------------------------LPE---LPALLEYINADNN 150 (571)
T ss_dssp CEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-------------------------CCC---CCTTCCEEECCSS
T ss_pred CEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-------------------------CCC---cCccccEEeCCCC
Confidence 999999999986 776 543 45555555554443 333 3445555555555
Q ss_pred cCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccCCccccCCCccccc----CCCCCcEEEccCCccc
Q 039720 193 KLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFKGSLPVCLGF----NLPKLTVLVVAQNNLT 268 (973)
Q Consensus 193 ~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~----~l~~L~~L~Ls~N~l~ 268 (973)
+|++ +|. .+++|++|+|++|+|++ +|. |. ++|+.|+|++|+|+ .+|. +.. ..+.|+.|+|++|.|+
T Consensus 151 ~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~~L~~~~~~L~~L~Ls~N~l~ 220 (571)
T 3cvr_A 151 QLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPVRNHHSEETEIFFRCRENRIT 220 (571)
T ss_dssp CCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC--------CCEEEECCSSCCC
T ss_pred ccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHHhhhcccccceEEecCCCcce
Confidence 5543 333 34455555555555554 333 33 55555555555555 5555 321 1122388888888888
Q ss_pred ccCCccccCCCCCCEEEccCCcccccCcccccCccc
Q 039720 269 GFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPN 304 (973)
Q Consensus 269 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 304 (973)
.+|..+..+++|++|+|++|.+++..|..|..++.
T Consensus 221 -~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 221 -HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp -CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred -ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 46777777888888888888888877777666544
No 343
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.88 E-value=1.3e-22 Score=226.57 Aligned_cols=204 Identities=15% Similarity=0.086 Sum_probs=129.7
Q ss_pred CceeeeEeeCCCCeEEEEEeeccCccccccCCCcCCCCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCc-
Q 039720 50 CQWTGVTCGHRHQRVTKLDLESQNIGGFLSPYIGNLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPT- 128 (973)
Q Consensus 50 c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~- 128 (973)
|.|..|.|++ ++++ .+|..+ .+++++|+|++|+|+...+..|+++++|++|+|++|.+.+.+|.
T Consensus 9 C~~~~v~C~~------------~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~ 73 (350)
T 4ay9_X 9 CSNRVFLCQE------------SKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEAD 73 (350)
T ss_dssp EETTEEEEES------------TTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTT
T ss_pred eeCCEEEecC------------CCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChh
Confidence 5677777764 3443 466655 36899999999999944445799999999999999999877765
Q ss_pred ccccCCCccc-eEecccccccchhhhhccccccceeeccCCcccccCCCCCCCCCcccEEEccC-CcCCCCCCCcccCCC
Q 039720 129 NLSRCFNLID-FWVHTNNLVGEIQAIIGNWLKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAG-NKLDGRIPDSLGQLR 206 (973)
Q Consensus 129 ~~~~l~~L~~-L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~L~ 206 (973)
.|.+++++++ +.+..|++.+..|..|..+++|++|++++|++++..+..+....++..|++.+ |++....+..|..+.
T Consensus 74 ~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~ 153 (350)
T 4ay9_X 74 VFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLS 153 (350)
T ss_dssp SBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSB
T ss_pred HhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcc
Confidence 4677777765 34445666666666677777777777777777655555555566666666654 455544444555553
Q ss_pred -ccceeccCCCCccccCCccccCCCCCcEEEccC-CccccCCCcccccCCCCCcEEEccCCccccc
Q 039720 207 -NLNYLGTSENDFSGMFPLSVCNISSLDEAYLFK-NRFKGSLPVCLGFNLPKLTVLVVAQNNLTGF 270 (973)
Q Consensus 207 -~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~ 270 (973)
.|+.|+|++|+|+.+.+..| ...+|+++++.+ |.++ .+|...|.++++|++|+|++|+|+.+
T Consensus 154 ~~l~~L~L~~N~i~~i~~~~f-~~~~L~~l~l~~~n~l~-~i~~~~f~~l~~L~~LdLs~N~l~~l 217 (350)
T 4ay9_X 154 FESVILWLNKNGIQEIHNSAF-NGTQLDELNLSDNNNLE-ELPNDVFHGASGPVILDISRTRIHSL 217 (350)
T ss_dssp SSCEEEECCSSCCCEECTTSS-TTEEEEEEECTTCTTCC-CCCTTTTTTEECCSEEECTTSCCCCC
T ss_pred hhhhhhccccccccCCChhhc-cccchhHHhhccCCccc-CCCHHHhccCcccchhhcCCCCcCcc
Confidence 46666666666664333333 334555555553 3333 55555555555555555555555543
No 344
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.87 E-value=1.5e-24 Score=246.03 Aligned_cols=265 Identities=16% Similarity=0.199 Sum_probs=182.9
Q ss_pred ccCCcccccCCccccCCCCCCEEEccCCcccccCc----ccccCcccccceecccccCCCCCCCChhhhhhhccccccee
Q 039720 262 VAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVR----INFNSLPNLSKLYLGRNNLGTRTSTDLDFITLLTNCSKLVK 337 (973)
Q Consensus 262 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~----~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~ 337 (973)
++...+. .++..+..+++|++|+|++|+|+...+ ..|..+++|++|+|++|.+..
T Consensus 16 l~~~~~~-~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~-------------------- 74 (386)
T 2ca6_A 16 ITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGR-------------------- 74 (386)
T ss_dssp CCSHHHH-TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTS--------------------
T ss_pred CCHHHHH-HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCc--------------------
Confidence 3333343 456677778888888888888876533 336677778888877776532
Q ss_pred eccccccccCCCChhhhhhhhhhhHhhhcCCccccCCCccccCCCCcCEEEcccccCCC----CCCccccCCCCCCeEEc
Q 039720 338 LGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEIRNLFNLNGLGLEYNQLTG----TIPPAIGELRNLQYLGL 413 (973)
Q Consensus 338 L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L 413 (973)
+.+.+|..+..+ ...+..+++|++|+|++|++++ .+|..+..+++|++|+|
T Consensus 75 -------l~~~~~~~~~~l------------------~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L 129 (386)
T 2ca6_A 75 -------VKDEIPEALRLL------------------LQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYL 129 (386)
T ss_dssp -------CGGGSHHHHHHH------------------HHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEEC
T ss_pred -------cccchhHHHHHH------------------HHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEEC
Confidence 333444443332 1345677888888998888886 36777888888888888
Q ss_pred cCcccCCCCCCccCC----c---------CccceEEcCCCccc-cccc---cccccccccccccccCcccccCCCccccc
Q 039720 414 VGNNIRGIIPDPIGN----L---------TLLNVLQLGFNKLQ-GSIP---SYLGKCQNLMQLSAPNNKLNGTLPPQIFG 476 (973)
Q Consensus 414 ~~N~l~~~~p~~~~~----l---------~~L~~L~Ls~N~l~-~~~p---~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 476 (973)
++|.+....+..+.. + ++|++|+|++|+++ +.+| ..+..+++|+.|++++|++... .
T Consensus 130 ~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~---g--- 203 (386)
T 2ca6_A 130 HNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPE---G--- 203 (386)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHH---H---
T ss_pred cCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHh---H---
Confidence 888886444433333 3 78888888888886 3444 3555666777777766666410 0
Q ss_pred cccccceeeccCCcccccCCcccccccccceeccccCccc----ccccccccCccchhhhcccCcccccc----cccchh
Q 039720 477 ITTLSKLLDLSENHLSGSIPLEVGNLKSLVQLDISRNNFS----NEIPVTLSACTTLEYLLMQGNSFNGS----IPQSLN 548 (973)
Q Consensus 477 ~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~----~~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~ 548 (973)
+....|..+..+++|+.|+|++|.++ +.+|..+..+++|+.|+|++|+|++. ++..+.
T Consensus 204 --------------~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~ 269 (386)
T 2ca6_A 204 --------------IEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFS 269 (386)
T ss_dssp --------------HHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHH
T ss_pred --------------HHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHh
Confidence 00023335667778888888888885 56777788888888888888888765 455663
Q ss_pred h--hccCCeecCCCCcccc----ccCCCC-CCCCccceEeccCCcCcCcCC
Q 039720 549 A--LKSIKELDLSCNNLSG----QIPIHL-GNLPFLEYLNLSYNHFEGKVP 592 (973)
Q Consensus 549 ~--l~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~L~ls~N~l~~~~p 592 (973)
. +++|+.|+|++|+|++ .+|..+ .++++|++|++++|++++..+
T Consensus 270 ~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 270 KLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp TCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred hccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 3 7888889999998886 477777 568889999999998887664
No 345
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.87 E-value=2e-24 Score=245.06 Aligned_cols=215 Identities=20% Similarity=0.252 Sum_probs=113.9
Q ss_pred ccCCCcCCCCCCEEEccCCCCCCCC----CccccccCCCCEEeeecc---cCCCCCCccc-------ccCCCccceEecc
Q 039720 78 LSPYIGNLSFLRVINLANNSFHGQI----PKEVGRLFRLETIVLSNN---SFSGKIPTNL-------SRCFNLIDFWVHT 143 (973)
Q Consensus 78 ~~~~l~~l~~L~~L~L~~n~l~~~~----p~~~~~l~~L~~L~Ls~n---~l~~~~p~~~-------~~l~~L~~L~l~~ 143 (973)
++..+..+++|++|+|++|++++.. +..+..+++|++|+|++| .+++.+|..+ ..+++|++|++++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 4445666777888888888777543 334667778888888775 4444555544 4556666666666
Q ss_pred ccccc----chhhhhccccccceeeccCCcccccCCCCCC----CC---------CcccEEEccCCcCC-CCCC---Ccc
Q 039720 144 NNLVG----EIQAIIGNWLKIERLSLYGNQLTGQLPPSIG----NL---------SALQTFDIAGNKLD-GRIP---DSL 202 (973)
Q Consensus 144 n~~~~----~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~----~l---------~~L~~L~L~~N~l~-~~~p---~~~ 202 (973)
|.+.+ .+|..+..+++|++|+|++|.++...+..+. .+ ++|++|+|++|+++ +.+| ..+
T Consensus 104 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l 183 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTF 183 (386)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHH
Confidence 66555 3555556666666666666665432222222 22 55666666666654 2233 244
Q ss_pred cCCCccceeccCCCCcc--c---cCCccccCCCCCcEEEccCCccc----cCCCcccccCCCCCcEEEccCCccccc---
Q 039720 203 GQLRNLNYLGTSENDFS--G---MFPLSVCNISSLDEAYLFKNRFK----GSLPVCLGFNLPKLTVLVVAQNNLTGF--- 270 (973)
Q Consensus 203 ~~L~~L~~L~Ls~N~l~--~---~~p~~~~~l~~L~~L~L~~N~l~----~~ip~~~~~~l~~L~~L~Ls~N~l~~~--- 270 (973)
..+++|++|+|++|+++ | ..|..+..+++|+.|+|++|+++ +.+|..+. .+++|++|+|++|.|++.
T Consensus 184 ~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~-~~~~L~~L~L~~n~i~~~~~~ 262 (386)
T 2ca6_A 184 QSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALK-SWPNLRELGLNDCLLSARGAA 262 (386)
T ss_dssp HHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGG-GCTTCCEEECTTCCCCHHHHH
T ss_pred HhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHc-cCCCcCEEECCCCCCchhhHH
Confidence 45555666666666554 1 22334444455555555555543 23333332 344455555555544433
Q ss_pred -CCcccc--CCCCCCEEEccCCcccc
Q 039720 271 -LPQSLS--NASKLEWLELNENHFSG 293 (973)
Q Consensus 271 -~p~~~~--~l~~L~~L~Ls~N~l~~ 293 (973)
++..+. .+++|++|+|++|.|++
T Consensus 263 ~l~~~l~~~~~~~L~~L~L~~n~i~~ 288 (386)
T 2ca6_A 263 AVVDAFSKLENIGLQTLRLQYNEIEL 288 (386)
T ss_dssp HHHHHHHTCSSCCCCEEECCSSCCBH
T ss_pred HHHHHHhhccCCCeEEEECcCCcCCH
Confidence 233332 24445555555544443
No 346
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=3.6e-22 Score=222.91 Aligned_cols=240 Identities=17% Similarity=0.125 Sum_probs=199.7
Q ss_pred CEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhh-hhccccccce-eecc
Q 039720 89 RVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQA-IIGNWLKIER-LSLY 166 (973)
Q Consensus 89 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~-~~~~l~~L~~-L~L~ 166 (973)
++++.++++++ .||..+ .+++++|+|++|+|+..-+..|.++++|++|++++|++.+.+|. .|.+++++.+ +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 56788999999 899877 47899999999999943345789999999999999999887764 6788988765 6777
Q ss_pred CCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCC-CCccccCCccccCCC-CCcEEEccCCcccc
Q 039720 167 GNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSE-NDFSGMFPLSVCNIS-SLDEAYLFKNRFKG 244 (973)
Q Consensus 167 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~-N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~ 244 (973)
+|+++...|..|.++++|++|++++|++++..+..+....++..|++++ |++....+..|..+. .++.|+|++|+|+
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~- 167 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ- 167 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc-
Confidence 8999988889999999999999999999977777788888899999965 678877777888775 6899999999998
Q ss_pred CCCcccccCCCCCcEEEccC-CcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceecccccCCCCCCCCh
Q 039720 245 SLPVCLGFNLPKLTVLVVAQ-NNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNLGTRTSTDL 323 (973)
Q Consensus 245 ~ip~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 323 (973)
.+|..++ ...+|+.|++++ |.++.+.++.|.++++|++|||++|+|+.+.+..|.++++|+.+++ ++++.++.
T Consensus 168 ~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l~~lP~--- 241 (350)
T 4ay9_X 168 EIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLKKLPT--- 241 (350)
T ss_dssp EECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC--TTCCCCCC---
T ss_pred CCChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccC--CCcCcCCC---
Confidence 7888887 678899999985 6777665668999999999999999999888888888888877765 34555442
Q ss_pred hhhhhhcccccceeeccccc
Q 039720 324 DFITLLTNCSKLVKLGLVFN 343 (973)
Q Consensus 324 ~~~~~l~~l~~L~~L~l~~N 343 (973)
+.++++|+.+++.++
T Consensus 242 -----l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 242 -----LEKLVALMEASLTYP 256 (350)
T ss_dssp -----TTTCCSCCEEECSCH
T ss_pred -----chhCcChhhCcCCCC
Confidence 556788888888654
No 347
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.87 E-value=1.1e-21 Score=208.00 Aligned_cols=157 Identities=24% Similarity=0.290 Sum_probs=91.1
Q ss_pred cceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccC
Q 039720 160 IERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFK 239 (973)
Q Consensus 160 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 239 (973)
|+.|+|++|.+++..+..|+++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++
T Consensus 37 l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 116 (251)
T 3m19_A 37 TEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGG 116 (251)
T ss_dssp CCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCC
Confidence 34444444444444444444444455555555555444444445555555555555555444444444555555555555
Q ss_pred CccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceecccccCCC
Q 039720 240 NRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNLGT 317 (973)
Q Consensus 240 N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 317 (973)
|+++ .+|...+.++++|++|+|++|.|++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|++..
T Consensus 117 N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 117 NQLK-SLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp SCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred CcCC-CcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 5554 4444444456677777777777776666667777777777777777777777677777777777777777654
No 348
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=5.5e-22 Score=217.05 Aligned_cols=193 Identities=23% Similarity=0.333 Sum_probs=107.4
Q ss_pred CCCCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhcccccccee
Q 039720 84 NLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERL 163 (973)
Q Consensus 84 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L 163 (973)
.+++|++|++++|+++ .+| .+..+++|++|+|++|.+++ +|. +. .+++|++|
T Consensus 39 ~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~------------------------~l~~L~~L 90 (308)
T 1h6u_A 39 DLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITD-LAP-LK------------------------NLTKITEL 90 (308)
T ss_dssp HHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GT------------------------TCCSCCEE
T ss_pred HcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCC-Chh-Hc------------------------cCCCCCEE
Confidence 4556666666666665 344 45566666666666666553 222 44 44555555
Q ss_pred eccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccCCccc
Q 039720 164 SLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFK 243 (973)
Q Consensus 164 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 243 (973)
+|++|.+++ ++ .+..+++|++|++++|++++ ++. +..+++|++|++++|.+++..+ +..+++|++|++++|+++
T Consensus 91 ~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~ 164 (308)
T 1h6u_A 91 ELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVS 164 (308)
T ss_dssp ECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCC
T ss_pred EccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCC
Confidence 555555543 22 35555555555555555553 222 5555555555555555554332 555555555555555555
Q ss_pred cCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceecccccCCC
Q 039720 244 GSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNLGT 317 (973)
Q Consensus 244 ~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 317 (973)
.++. +..+++|+.|++++|.+++..+ +..+++|++|+|++|++++..+ +..+++|+.|+|++|+++.
T Consensus 165 -~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 165 -DLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp -CCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred -CChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 2333 2356666666666666664432 6666666666666666665442 5666666666666666644
No 349
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.86 E-value=7.5e-22 Score=216.01 Aligned_cols=192 Identities=22% Similarity=0.344 Sum_probs=130.3
Q ss_pred eEEEEEeeccCccccccCCCcCCCCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEec
Q 039720 63 RVTKLDLESQNIGGFLSPYIGNLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVH 142 (973)
Q Consensus 63 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~ 142 (973)
+++.|+++++.+.. ++ .+..+++|++|+|++|++++ ++. ++.+++|++|+|++|.+++ +| .+..+++|
T Consensus 42 ~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L------ 109 (308)
T 1h6u_A 42 GITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKN-VS-AIAGLQSI------ 109 (308)
T ss_dssp TCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTC------
T ss_pred CcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCC------
Confidence 68899999999875 44 68999999999999999985 554 9999999999999999984 33 45555554
Q ss_pred ccccccchhhhhccccccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccC
Q 039720 143 TNNLVGEIQAIIGNWLKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMF 222 (973)
Q Consensus 143 ~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~ 222 (973)
++|+|++|++++ +|. +..+++|++|++++|++++..+ +..+++|++|++++|++++..
T Consensus 110 ------------------~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~ 167 (308)
T 1h6u_A 110 ------------------KTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLT 167 (308)
T ss_dssp ------------------CEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCG
T ss_pred ------------------CEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCCh
Confidence 555555555543 222 5555555555555555553222 555556666666666555433
Q ss_pred CccccCCCCCcEEEccCCccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccC
Q 039720 223 PLSVCNISSLDEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQV 295 (973)
Q Consensus 223 p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 295 (973)
+ +..+++|++|++++|+++ .++. +..+++|++|+|++|.+++.. .+..+++|++|+|++|++++..
T Consensus 168 ~--l~~l~~L~~L~l~~n~l~-~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~~~ 233 (308)
T 1h6u_A 168 P--LANLSKLTTLKADDNKIS-DISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITNQP 233 (308)
T ss_dssp G--GTTCTTCCEEECCSSCCC-CCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEECCC
T ss_pred h--hcCCCCCCEEECCCCccC-cChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeecCC
Confidence 2 555666666666666665 3333 236778888888888887654 3788888888888888887543
No 350
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=5e-22 Score=213.71 Aligned_cols=138 Identities=19% Similarity=0.206 Sum_probs=112.3
Q ss_pred HHHHhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccc------------------hhHHHHHHHHHHHHhcCC
Q 039720 669 LSKATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKK------------------GATKSFVAECEALRNIRH 730 (973)
Q Consensus 669 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~e~~~l~~l~h 730 (973)
+......|.+.+.||+|+||.||+|++ .+|+.||||+++.... .....+.+|+.+++.++|
T Consensus 85 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~ 163 (282)
T 1zar_A 85 LVRSGKVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG 163 (282)
T ss_dssp HHHTTSCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHhCCeEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC
Confidence 334455677779999999999999999 7999999999964321 134568899999999984
Q ss_pred CCceeEEeEeeecccCCCceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcE
Q 039720 731 RNLIKIITICSSIDFKGADFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNV 810 (973)
Q Consensus 731 ~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NI 810 (973)
+++.+++.. ...++||||++||+|.+ +.. .....++.|++.|++|||+. +|+||||||+||
T Consensus 164 ---~~v~~~~~~------~~~~lvmE~~~g~~L~~-l~~------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NI 224 (282)
T 1zar_A 164 ---LAVPKVYAW------EGNAVLMELIDAKELYR-VRV------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNV 224 (282)
T ss_dssp ---SSSCCEEEE------ETTEEEEECCCCEEGGG-CCC------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSE
T ss_pred ---CCcCeEEec------cceEEEEEecCCCcHHH-cch------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHE
Confidence 444444322 45689999999999998 422 33567999999999999999 999999999999
Q ss_pred EecCCCcEEEeccccch
Q 039720 811 LLDHDMVAHVSDFGLAR 827 (973)
Q Consensus 811 Ll~~~~~~kl~Dfg~a~ 827 (973)
|++ ++.+||+|||+|+
T Consensus 225 Ll~-~~~vkl~DFG~a~ 240 (282)
T 1zar_A 225 LVS-EEGIWIIDFPQSV 240 (282)
T ss_dssp EEE-TTEEEECCCTTCE
T ss_pred EEE-CCcEEEEECCCCe
Confidence 999 9999999999986
No 351
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=2e-21 Score=199.88 Aligned_cols=185 Identities=18% Similarity=0.197 Sum_probs=127.8
Q ss_pred CCceeeeEeeCCCCeEEEEEeeccCccccccCCCcCCCCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCc
Q 039720 49 LCQWTGVTCGHRHQRVTKLDLESQNIGGFLSPYIGNLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPT 128 (973)
Q Consensus 49 ~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~ 128 (973)
.|.|.+|.|+... +. .+|..+ .++|++|+|++|++++..+..|+++++|++|+|++|.+++..+.
T Consensus 6 ~C~~~~v~c~~~~------------l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 70 (208)
T 2o6s_A 6 SCSGTTVECYSQG------------RT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNG 70 (208)
T ss_dssp EEETTEEECCSSC------------CS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTT
T ss_pred EECCCEEEecCCC------------cc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChh
Confidence 3789999997532 21 244333 45889999999999866666788899999999999988854343
Q ss_pred ccccCCCccceEecccccccchhhhhccccccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCcc
Q 039720 129 NLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNL 208 (973)
Q Consensus 129 ~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L 208 (973)
.|..+ ++|++|+|++|++++..+..|+++++|++|++++|++++..+..|.++++|
T Consensus 71 ~~~~l------------------------~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 126 (208)
T 2o6s_A 71 VFNKL------------------------TSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQL 126 (208)
T ss_dssp TTTTC------------------------TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred hcCCC------------------------CCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcC
Confidence 34444 555666666666664444556666667777777777665555556667777
Q ss_pred ceeccCCCCccccCCccccCCCCCcEEEccCCccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCC
Q 039720 209 NYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASK 280 (973)
Q Consensus 209 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 280 (973)
++|++++|++++..+..+..+++|+.|++++|.+.+ .+++|+.|+++.|.++|.+|..++.++.
T Consensus 127 ~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~--------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 127 KDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC--------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp CEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC--------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred CEEECCCCccceeCHHHhccCCCccEEEecCCCeec--------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 777777777766555556667777777777776653 4567788888888888888887777665
No 352
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=9.4e-21 Score=194.78 Aligned_cols=181 Identities=18% Similarity=0.231 Sum_probs=151.3
Q ss_pred CEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccceeeccCC
Q 039720 89 RVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLYGN 168 (973)
Q Consensus 89 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n 168 (973)
+.++++++.++ .+|..+ .++|++|+|++|.+++..+. .+..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~------------------------~~~~l~~L~~L~l~~n 62 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNG------------------------VFDELTSLTQLYLGGN 62 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTT------------------------TTTTCTTCSEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChh------------------------hhcccccCcEEECCCC
Confidence 45677777777 566555 45788888888887743333 3445677888888899
Q ss_pred cccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccCCccccCCCc
Q 039720 169 QLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFKGSLPV 248 (973)
Q Consensus 169 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~ 248 (973)
++++..+..|.++++|++|+|++|++++..+..|.++++|++|++++|++++..+..|.++++|++|+|++|+++ .+|.
T Consensus 63 ~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~ 141 (208)
T 2o6s_A 63 KLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLK-SVPD 141 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS-CCCT
T ss_pred ccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccc-eeCH
Confidence 888666677899999999999999999777778999999999999999999888888999999999999999999 5666
Q ss_pred ccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCccc
Q 039720 249 CLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPN 304 (973)
Q Consensus 249 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 304 (973)
..+..+++|++|++++|.+.+ .+++|++|+++.|+++|.+|..++.++.
T Consensus 142 ~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 142 GVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp TTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred HHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 666689999999999998774 4568999999999999999999888765
No 353
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.83 E-value=1.3e-20 Score=221.21 Aligned_cols=178 Identities=22% Similarity=0.340 Sum_probs=144.8
Q ss_pred CCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccceeecc
Q 039720 87 FLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLY 166 (973)
Q Consensus 87 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~ 166 (973)
+|+.|+|++|++++ +|..+. ++|++|+|++|.|+ .+| ..+++|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---------------------------~~l~~L~~L~Ls 108 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---------------------------ELPASLEYLDAC 108 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---------------------------CCCTTCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---------------------------cccCCCCEEEcc
Confidence 67777777777764 666553 66777777777776 455 124688999999
Q ss_pred CCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccCCccccCC
Q 039720 167 GNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFKGSL 246 (973)
Q Consensus 167 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~i 246 (973)
+|+|++ +|. |.+ +|++|+|++|+|++ +|. .+++|++|+|++|.|++ +|. .+++|++|+|++|++++ +
T Consensus 109 ~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-l 175 (571)
T 3cvr_A 109 DNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-L 175 (571)
T ss_dssp SSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-C
T ss_pred CCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-c
Confidence 999996 777 766 99999999999996 776 68999999999999997 555 67899999999999995 8
Q ss_pred CcccccCCCCCcEEEccCCcccccCCccccCCCCC-------CEEEccCCcccccCcccccCcccccceecccccCCC
Q 039720 247 PVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKL-------EWLELNENHFSGQVRINFNSLPNLSKLYLGRNNLGT 317 (973)
Q Consensus 247 p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 317 (973)
|. +. ++|+.|+|++|.|+ .+|. |.. +| ++|+|++|+|+. +|..+..+++|+.|+|++|+++.
T Consensus 176 p~-l~---~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~L~~N~l~~ 244 (571)
T 3cvr_A 176 PE-LP---ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRITH-IPENILSLDPTCTIILEDNPLSS 244 (571)
T ss_dssp CC-CC---TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCCC-CCGGGGGSCTTEEEECCSSSCCH
T ss_pred ch-hh---CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCccee-cCHHHhcCCCCCEEEeeCCcCCC
Confidence 88 43 89999999999999 5666 655 77 999999999996 56667779999999999999976
No 354
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.83 E-value=5.7e-22 Score=241.54 Aligned_cols=223 Identities=21% Similarity=0.172 Sum_probs=120.5
Q ss_pred cchhhHHHHHHHHhhccCCCcCCCCCCC-CCCCCCceeeeEeeCCCCeEEEEEeeccCccccccCCCcCCCCCCE-----
Q 039720 17 ATSHVKHATVTFNMQQLHDPLGVTKSWN-NSINLCQWTGVTCGHRHQRVTKLDLESQNIGGFLSPYIGNLSFLRV----- 90 (973)
Q Consensus 17 ~~~~~~~~ll~~~~~~~~d~~~~l~sw~-~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~----- 90 (973)
-+..+|++|+++..+...+....-..|. .++.++.|.+++++. .+++.|+|.++++.+ ++..+.....|+.
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~ 205 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST--PLTPKIELFANGKDE-ANQALLQHKKLSQYSIDE 205 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC--CccceEEeeCCCCCc-chhhHhhcCccCcccccC
Confidence 4566789999998776444444555774 444567899999975 579999999988876 3443333333333
Q ss_pred EEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccceeeccCCcc
Q 039720 91 INLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLYGNQL 170 (973)
Q Consensus 91 L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l 170 (973)
++++.|.+. ..|..+..+++|++|+|++|.+. .+|..++.+++|++|+|++|.+. .+|..|+++++|++|+|++|.|
T Consensus 206 ~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l 282 (727)
T 4b8c_D 206 DDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRL 282 (727)
T ss_dssp -----------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCC
T ss_pred cccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcC
Confidence 333444454 56778889999999999999998 78888888888888888888887 7777788888888888888888
Q ss_pred cccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCC-CcEEEccCCccccCCC
Q 039720 171 TGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISS-LDEAYLFKNRFKGSLP 247 (973)
Q Consensus 171 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~ip 247 (973)
+ .+|..|++|++|++|+|++|.|+ .+|..|++|++|++|+|++|.|++.+|..+..+.. +..++|++|.+++.+|
T Consensus 283 ~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p 358 (727)
T 4b8c_D 283 T-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLP 358 (727)
T ss_dssp S-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_pred C-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCc
Confidence 8 67888888888888888888886 67777888888888888888888777766644322 1235566666665554
No 355
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.83 E-value=1.1e-22 Score=240.32 Aligned_cols=203 Identities=17% Similarity=0.188 Sum_probs=122.1
Q ss_pred cCCCCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccce
Q 039720 83 GNLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIER 162 (973)
Q Consensus 83 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~ 162 (973)
...++|+.|+|++|+++ .+|.++++|++|+.|++++|.....+|. .+..++..+.+|..++.+++|+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~-----------ll~~~~~~~~~~~~l~~l~~L~~ 413 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIIL-----------LMRALDPLLYEKETLQYFSTLKA 413 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHH-----------HHHHHCTGGGHHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHH-----------HHHhcccccCCHHHHHHHHhccc
Confidence 44556666666666665 5666666666666666655431000000 00111244555666666666666
Q ss_pred ee-ccC-------------CcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccC
Q 039720 163 LS-LYG-------------NQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCN 228 (973)
Q Consensus 163 L~-L~~-------------n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~ 228 (973)
|+ ++. |.++...+ ..|+.|+|++|+|++ +|. |+++++|++|+|++|.|+ .+|..+++
T Consensus 414 L~~l~~n~~~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 414 VDPMRAAYLDDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp HCGGGHHHHHHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGG
T ss_pred CcchhhcccchhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhc
Confidence 65 444 44442211 247777888887774 565 777777888888777777 56777777
Q ss_pred CCCCcEEEccCCccccCCCcccccCCCCCcEEEccCCcccccC-CccccCCCCCCEEEccCCcccccCccc---ccCccc
Q 039720 229 ISSLDEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFL-PQSLSNASKLEWLELNENHFSGQVRIN---FNSLPN 304 (973)
Q Consensus 229 l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~~~~---~~~l~~ 304 (973)
+++|+.|+|++|++++ +| .+. ++++|++|+|++|.|++.. |..|.++++|++|+|++|++++.++.. +..+++
T Consensus 485 l~~L~~L~Ls~N~l~~-lp-~l~-~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~ 561 (567)
T 1dce_A 485 LRCLEVLQASDNALEN-VD-GVA-NLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPS 561 (567)
T ss_dssp CTTCCEEECCSSCCCC-CG-GGT-TCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTT
T ss_pred CCCCCEEECCCCCCCC-Cc-ccC-CCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcc
Confidence 7777777777777773 66 333 6777777777777777665 777777777777777777777654422 233555
Q ss_pred cccee
Q 039720 305 LSKLY 309 (973)
Q Consensus 305 L~~L~ 309 (973)
|+.|+
T Consensus 562 L~~L~ 566 (567)
T 1dce_A 562 VSSIL 566 (567)
T ss_dssp CSEEE
T ss_pred cCccC
Confidence 55554
No 356
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=5.3e-20 Score=191.98 Aligned_cols=162 Identities=23% Similarity=0.274 Sum_probs=105.2
Q ss_pred CCCCCCCCCceeeeEeeCCCCeEEEEEeeccCccccccCCCcCCCCCCEEEccCCCCCCCCCccccccCCCCEEeeeccc
Q 039720 42 SWNNSINLCQWTGVTCGHRHQRVTKLDLESQNIGGFLSPYIGNLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNS 121 (973)
Q Consensus 42 sw~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~ 121 (973)
-|..+++.|+|.+|.|+.. ++ +.+|..+. ++|++|+|++|++++..|..|+++++|++|+|++|.
T Consensus 11 ~~~~~~~~Cs~~~v~c~~~------------~l-~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~ 75 (229)
T 3e6j_A 11 AACPSQCSCSGTTVDCRSK------------RH-ASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQ 75 (229)
T ss_dssp CCCCTTCEEETTEEECTTS------------CC-SSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred ccCCCCCEEeCCEeEccCC------------Cc-CccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCC
Confidence 3444678899999999753 22 24565443 889999999999998888889999999999999999
Q ss_pred CCCCCCcccccCCCccceEecccccccchhhhhccccccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCc
Q 039720 122 FSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDS 201 (973)
Q Consensus 122 l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 201 (973)
+++..+..|..+++ |++|+|++|++++..+..|..+++|++|+|++|+|+ .+|..
T Consensus 76 l~~i~~~~~~~l~~------------------------L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~ 130 (229)
T 3e6j_A 76 LGALPVGVFDSLTQ------------------------LTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRG 130 (229)
T ss_dssp CCCCCTTTTTTCTT------------------------CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTT
T ss_pred CCCcChhhcccCCC------------------------cCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcc
Confidence 97433344555554 455555555555444444555555555555555555 45555
Q ss_pred ccCCCccceeccCCCCccccCCccccCCCCCcEEEccCCccc
Q 039720 202 LGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFK 243 (973)
Q Consensus 202 ~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 243 (973)
+.++++|++|+|++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 131 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 131 IERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp GGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBC
T ss_pred cccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCcc
Confidence 555555555555555555544455555555555666555555
No 357
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.79 E-value=2e-19 Score=194.93 Aligned_cols=172 Identities=20% Similarity=0.313 Sum_probs=87.3
Q ss_pred cccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccceeeccCCcccccCCCCCCCCCcccE
Q 039720 107 GRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLYGNQLTGQLPPSIGNLSALQT 186 (973)
Q Consensus 107 ~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 186 (973)
..+++|++|++++|.+. .+| .+..+++|++|++++|++.+..+ +.++++|++|+|++|.+++ +| .++.+++|++
T Consensus 43 ~~l~~L~~L~l~~~~i~-~~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~ 116 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKS 116 (291)
T ss_dssp HHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCE
T ss_pred hhcCcccEEEccCCCcc-cCh-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCE
Confidence 34455555555555544 222 24444444444444444433322 4455555555555555553 22 2555666666
Q ss_pred EEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccCCccccCCCcccccCCCCCcEEEccCCc
Q 039720 187 FDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNN 266 (973)
Q Consensus 187 L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~ 266 (973)
|++++|++++ + ..+..+++|++|++++|++++. ..+..+++|++|++++|++++ ++. +..+++|+.|+|++|.
T Consensus 117 L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~-~~~--l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 117 LSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD-IVP--LAGLTKLQNLYLSKNH 189 (291)
T ss_dssp EECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCC-CGG--GTTCTTCCEEECCSSC
T ss_pred EECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCcccc-chh--hcCCCccCEEECCCCc
Confidence 6666666653 2 3455566666666666666543 344555555555555555542 222 2245555555555555
Q ss_pred ccccCCccccCCCCCCEEEccCCcccc
Q 039720 267 LTGFLPQSLSNASKLEWLELNENHFSG 293 (973)
Q Consensus 267 l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 293 (973)
|++. + .+..+++|++|+|++|+++.
T Consensus 190 i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 190 ISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred CCCC-h-hhccCCCCCEEECcCCcccC
Confidence 5542 2 25556666666666665554
No 358
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=1.9e-19 Score=213.65 Aligned_cols=206 Identities=19% Similarity=0.272 Sum_probs=146.1
Q ss_pred CCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccceeec
Q 039720 86 SFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSL 165 (973)
Q Consensus 86 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L 165 (973)
..+..++|+.+.++..++ +..|++|++|+|++|.+. .+| .+..+++|+.|++++|.+.+..+ +..+++|+.|+|
T Consensus 21 ~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~L 94 (605)
T 1m9s_A 21 AETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFL 94 (605)
T ss_dssp HHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEEC
T ss_pred HHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEEC
Confidence 344555666666654333 456777777777777776 344 46667777777777777666554 777788888888
Q ss_pred cCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccCCccccC
Q 039720 166 YGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFKGS 245 (973)
Q Consensus 166 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 245 (973)
++|.+++ +| .|..+++|++|+|++|++++ + ..+..+++|+.|+|++|++++. ..++.+++|+.|+|++|++.+.
T Consensus 95 s~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~ 168 (605)
T 1m9s_A 95 DENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDI 168 (605)
T ss_dssp CSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCC
T ss_pred cCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCc
Confidence 8888874 33 68888888888888888874 3 4588888888888888888865 5677888888888888888754
Q ss_pred CCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccce
Q 039720 246 LPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKL 308 (973)
Q Consensus 246 ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 308 (973)
.| +..+++|+.|+|++|.|++. ..+..+++|+.|+|++|++++.....+..+..+..|
T Consensus 169 ~~---l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~~l~~~~~l 226 (605)
T 1m9s_A 169 VP---LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTV 226 (605)
T ss_dssp GG---GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCCCCSSCEEECCC
T ss_pred hh---hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCcccccccEEecccc
Confidence 44 34778888888888888764 357888888888888888876555545444444433
No 359
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=5.4e-19 Score=183.02 Aligned_cols=153 Identities=20% Similarity=0.331 Sum_probs=137.9
Q ss_pred ceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccCC
Q 039720 161 ERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKN 240 (973)
Q Consensus 161 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 240 (973)
+.+++++|.++ .+|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|+|++..|.+|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 57888888888 6777665 68999999999999777778999999999999999999888999999999999999999
Q ss_pred ccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceecccccCCC
Q 039720 241 RFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNLGT 317 (973)
Q Consensus 241 ~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 317 (973)
+++ .+|...+.++++|++|+|++|.|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|.+..
T Consensus 91 ~l~-~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 91 KIT-ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCC-ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 998 7888877789999999999999999889999999999999999999999988899999999999999998854
No 360
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=4.3e-19 Score=198.79 Aligned_cols=176 Identities=21% Similarity=0.293 Sum_probs=98.7
Q ss_pred CEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccceeeccCCcccccCCCCCC-CCCcccEEEccC
Q 039720 113 ETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLYGNQLTGQLPPSIG-NLSALQTFDIAG 191 (973)
Q Consensus 113 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~L~~ 191 (973)
+++++++|.++ .+|..+.. .++.|+|++|++++..+..|. ++++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~~--------------------------~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~ 73 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLPS--------------------------YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSH 73 (361)
T ss_dssp TEEECCSSCCS-SCCSSCCT--------------------------TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCCC--------------------------CCCEEECCCCCCCccChhhhhhcccccCEEECCC
Confidence 56777777776 46654432 244555555555544444444 555555555555
Q ss_pred CcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccCCccccCCCcccccCCCCCcEEEccCCcccccC
Q 039720 192 NKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFL 271 (973)
Q Consensus 192 N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~ 271 (973)
|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|++++ ++...+.++++|+.|+|++|.|++..
T Consensus 74 N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~-~~~~~~~~l~~L~~L~L~~N~l~~l~ 152 (361)
T 2xot_A 74 NHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVV-VDRNAFEDMAQLQKLYLSQNQISRFP 152 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE-ECTTTTTTCTTCCEEECCSSCCCSCC
T ss_pred CcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccE-ECHHHhCCcccCCEEECCCCcCCeeC
Confidence 55554444555555555555555555555444455555555555555555542 22222235556666666666665443
Q ss_pred Cccc---cCCCCCCEEEccCCcccccCcccccCccc--ccceecccccCC
Q 039720 272 PQSL---SNASKLEWLELNENHFSGQVRINFNSLPN--LSKLYLGRNNLG 316 (973)
Q Consensus 272 p~~~---~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~--L~~L~L~~N~l~ 316 (973)
+..| ..+++|++|+|++|+|+.+.+..|..+++ |+.|+|++|.+.
T Consensus 153 ~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 153 VELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp GGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred HHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 3334 45677777777777777666666666666 367777777764
No 361
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.78 E-value=1.1e-19 Score=188.14 Aligned_cols=110 Identities=19% Similarity=0.212 Sum_probs=78.9
Q ss_pred eeeccCCcccccCCcccccccccceeccccCcccccccccccCccchhhhcccCcccccccccchhhhccCCeecCCCCc
Q 039720 483 LLDLSENHLSGSIPLEVGNLKSLVQLDISRNNFSNEIPVTLSACTTLEYLLMQGNSFNGSIPQSLNALKSIKELDLSCNN 562 (973)
Q Consensus 483 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 562 (973)
.|+|++|+|++..+..|..+++|+.|+|++|++++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+
T Consensus 61 ~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 140 (220)
T 2v70_A 61 KINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQ 140 (220)
T ss_dssp EEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSC
T ss_pred EEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCc
Confidence 44444444444445566677777777777777776666677777777777777777777667777777777777777777
Q ss_pred cccccCCCCCCCCccceEeccCCcCcCcCC
Q 039720 563 LSGQIPIHLGNLPFLEYLNLSYNHFEGKVP 592 (973)
Q Consensus 563 l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 592 (973)
|++..|..|..+++|+.|+|++|++.+..+
T Consensus 141 l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 141 ITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp CCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 777667777777777777777777776554
No 362
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.78 E-value=3.4e-19 Score=193.06 Aligned_cols=174 Identities=21% Similarity=0.310 Sum_probs=147.0
Q ss_pred CcCCCCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccc
Q 039720 82 IGNLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIE 161 (973)
Q Consensus 82 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~ 161 (973)
+..+++|++|++++|.++ .+| .++.+++|++|+|++|.+++ ++. +..+++|++|++++|.+.+ ++ .+..+++|+
T Consensus 42 ~~~l~~L~~L~l~~~~i~-~~~-~~~~l~~L~~L~L~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~ 115 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTD-IKP-LANLKNLGWLFLDENKVKD-LS-SLKDLKKLK 115 (291)
T ss_dssp HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCC
T ss_pred hhhcCcccEEEccCCCcc-cCh-hHhcCCCCCEEEccCCccCC-Ccc-cccCCCCCEEECCCCcCCC-Ch-hhccCCCCC
Confidence 456788899999999887 445 48888999999999999885 444 8889999999999998876 33 488999999
Q ss_pred eeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccCCc
Q 039720 162 RLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNR 241 (973)
Q Consensus 162 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 241 (973)
+|+|++|++++. +.+..+++|++|++++|++++. ..+..+++|++|++++|++++..| +..+++|++|++++|+
T Consensus 116 ~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 116 SLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 189 (291)
T ss_dssp EEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCc
Confidence 999999999853 5688999999999999999854 679999999999999999997665 8899999999999999
Q ss_pred cccCCCcccccCCCCCcEEEccCCccccc
Q 039720 242 FKGSLPVCLGFNLPKLTVLVVAQNNLTGF 270 (973)
Q Consensus 242 l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~ 270 (973)
++ .+|. +..+++|+.|++++|.++..
T Consensus 190 i~-~l~~--l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 190 IS-DLRA--LAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp CC-BCGG--GTTCTTCSEEEEEEEEEECC
T ss_pred CC-CChh--hccCCCCCEEECcCCcccCC
Confidence 98 5664 34899999999999999853
No 363
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.78 E-value=4.6e-19 Score=210.46 Aligned_cols=78 Identities=15% Similarity=0.254 Sum_probs=36.7
Q ss_pred ccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEcc
Q 039720 159 KIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLF 238 (973)
Q Consensus 159 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 238 (973)
++..+.++.+.++...+ +..|.+|+.|++++|.+. .+| .|..+++|+.|+|++|+|++..| +..+++|+.|+|+
T Consensus 22 ~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls 95 (605)
T 1m9s_A 22 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLD 95 (605)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECC
T ss_pred HHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECc
Confidence 34444555555443222 344555555555555554 233 35555555555555555554332 3334444444444
Q ss_pred CCcc
Q 039720 239 KNRF 242 (973)
Q Consensus 239 ~N~l 242 (973)
+|++
T Consensus 96 ~N~l 99 (605)
T 1m9s_A 96 ENKI 99 (605)
T ss_dssp SSCC
T ss_pred CCCC
Confidence 4433
No 364
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.77 E-value=1.7e-18 Score=179.32 Aligned_cols=145 Identities=23% Similarity=0.288 Sum_probs=85.8
Q ss_pred cCccccccCCCcCCCCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchh
Q 039720 72 QNIGGFLSPYIGNLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQ 151 (973)
Q Consensus 72 ~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~ 151 (973)
++++ .+|..+. +.|+.|+|++|++++..+..|..+++|++|+|++|.+++..|..|.++
T Consensus 21 ~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l------------------ 79 (220)
T 2v9t_B 21 KGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGL------------------ 79 (220)
T ss_dssp SCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTC------------------
T ss_pred CCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCC------------------
Confidence 3443 3555443 578888888888876556677788888888888887775555555554
Q ss_pred hhhccccccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCC
Q 039720 152 AIIGNWLKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISS 231 (973)
Q Consensus 152 ~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~ 231 (973)
++|++|+|++|++++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++
T Consensus 80 ------~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 153 (220)
T 2v9t_B 80 ------RSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRA 153 (220)
T ss_dssp ------SSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTT
T ss_pred ------cCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCC
Confidence 44455555555555333334455555555555555555555555555555555555555555544444554555
Q ss_pred CcEEEccCCccc
Q 039720 232 LDEAYLFKNRFK 243 (973)
Q Consensus 232 L~~L~L~~N~l~ 243 (973)
|+.|+|++|.+.
T Consensus 154 L~~L~L~~N~~~ 165 (220)
T 2v9t_B 154 IQTMHLAQNPFI 165 (220)
T ss_dssp CCEEECCSSCEE
T ss_pred CCEEEeCCCCcC
Confidence 555555554443
No 365
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.77 E-value=2.1e-18 Score=178.61 Aligned_cols=153 Identities=20% Similarity=0.227 Sum_probs=132.9
Q ss_pred ceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCC-CcccCCCccceeccCCCCccccCCccccCCCCCcEEEccC
Q 039720 161 ERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIP-DSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFK 239 (973)
Q Consensus 161 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 239 (973)
+.+++++|.++ .+|..+. ..+++|+|++|+|++..| ..|.++++|++|+|++|+|++..+.+|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 57889999888 5787765 356899999999987654 5688999999999999999988888999999999999999
Q ss_pred CccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceecccccCCC
Q 039720 240 NRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNLGT 317 (973)
Q Consensus 240 N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 317 (973)
|+++ .+|...+.++++|++|+|++|.|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|.+..
T Consensus 91 N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 91 NRLE-NVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp SCCC-CCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred CccC-ccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 9998 5555555689999999999999998889999999999999999999999989999999999999999998864
No 366
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.76 E-value=9.4e-19 Score=196.01 Aligned_cols=115 Identities=23% Similarity=0.243 Sum_probs=60.4
Q ss_pred CCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccCCccccCCCcccc---cCC
Q 039720 178 IGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFKGSLPVCLG---FNL 254 (973)
Q Consensus 178 ~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~---~~l 254 (973)
|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+++ .+|..++ ..+
T Consensus 84 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~~~~l 162 (361)
T 2xot_A 84 FVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS-RFPVELIKDGNKL 162 (361)
T ss_dssp TTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-SCCGGGTC----C
T ss_pred ccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC-eeCHHHhcCcccC
Confidence 333333334444444433333333444444444444444444333444444444444444444444 3444443 257
Q ss_pred CCCcEEEccCCcccccCCccccCCCC--CCEEEccCCcccc
Q 039720 255 PKLTVLVVAQNNLTGFLPQSLSNASK--LEWLELNENHFSG 293 (973)
Q Consensus 255 ~~L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~Ls~N~l~~ 293 (973)
++|+.|+|++|.|+...+..|..++. |+.|+|++|.+..
T Consensus 163 ~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 163 PKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp TTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred CcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccC
Confidence 77778888888887665567777776 4788899888874
No 367
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.76 E-value=1e-20 Score=223.28 Aligned_cols=195 Identities=20% Similarity=0.203 Sum_probs=134.0
Q ss_pred cccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccceeeccCCcccccCCCCCCCCCcccE
Q 039720 107 GRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLYGNQLTGQLPPSIGNLSALQT 186 (973)
Q Consensus 107 ~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 186 (973)
..+++|+.|+|++|.++ .+|.++++|++|++|++++|.....+|..+. .+.+.+.+|..++++++|+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~-----------~~~~~~~~~~~l~~l~~L~~ 413 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMR-----------ALDPLLYEKETLQYFSTLKA 413 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-----------HHCTGGGHHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHH-----------hcccccCCHHHHHHHHhccc
Confidence 56777777788777776 6677777777777777655443322232111 11244567888888899998
Q ss_pred EE-ccCCcCCCCCCC------cccC--CCccceeccCCCCccccCCccccCCCCCcEEEccCCccccCCCcccccCCCCC
Q 039720 187 FD-IAGNKLDGRIPD------SLGQ--LRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFKGSLPVCLGFNLPKL 257 (973)
Q Consensus 187 L~-L~~N~l~~~~p~------~~~~--L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L 257 (973)
|+ ++.|.+. .++. .+.. ...|++|+|++|.|++ +|. ++++++|+.|+|++|+++ .+|..+. ++++|
T Consensus 414 L~~l~~n~~~-~L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~-~l~~L 488 (567)
T 1dce_A 414 VDPMRAAYLD-DLRSKFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALA-ALRCL 488 (567)
T ss_dssp HCGGGHHHHH-HHHHHHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGG-GCTTC
T ss_pred Ccchhhcccc-hhhhhhhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhh-cCCCC
Confidence 88 6666432 1111 0111 1247788888888875 454 778888888888888887 7777665 78888
Q ss_pred cEEEccCCcccccCCccccCCCCCCEEEccCCcccccC-cccccCcccccceecccccCCCCCC
Q 039720 258 TVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQV-RINFNSLPNLSKLYLGRNNLGTRTS 320 (973)
Q Consensus 258 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~ 320 (973)
+.|+|++|.|++ +| .|+++++|++|+|++|+|++.. |..|..+++|+.|+|++|+++..+.
T Consensus 489 ~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 489 EVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp CEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 888888888886 45 7888888888888888888776 7778888888888888888776654
No 368
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.76 E-value=5.5e-18 Score=176.62 Aligned_cols=154 Identities=19% Similarity=0.203 Sum_probs=129.4
Q ss_pred CEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccceeeccCC
Q 039720 89 RVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLYGN 168 (973)
Q Consensus 89 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n 168 (973)
+.++.++++++ .+|..+. ++|++|+|++|.+++..|..| ..+++|++|+|++|
T Consensus 22 ~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~------------------------~~l~~L~~L~L~~N 74 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVF------------------------DSLINLKELYLGSN 74 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTT------------------------TTCTTCCEEECCSS
T ss_pred CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHh------------------------hCccCCcEEECCCC
Confidence 45777788876 6776654 778888888888876555544 44567888888888
Q ss_pred cccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccCCccccCCCc
Q 039720 169 QLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFKGSLPV 248 (973)
Q Consensus 169 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~ 248 (973)
++++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+++ .+|.
T Consensus 75 ~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~~~~ 152 (229)
T 3e6j_A 75 QLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLK-SIPH 152 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCC-CCCT
T ss_pred CCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCC-ccCH
Confidence 887666677899999999999999999877788999999999999999999 67889999999999999999999 6776
Q ss_pred ccccCCCCCcEEEccCCcccccC
Q 039720 249 CLGFNLPKLTVLVVAQNNLTGFL 271 (973)
Q Consensus 249 ~~~~~l~~L~~L~Ls~N~l~~~~ 271 (973)
..+..+++|+.|+|++|.+....
T Consensus 153 ~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 153 GAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp TTTTTCTTCCEEECTTSCBCTTB
T ss_pred HHHhCCCCCCEEEeeCCCccCCc
Confidence 66668999999999999998543
No 369
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.74 E-value=8.8e-19 Score=213.46 Aligned_cols=182 Identities=24% Similarity=0.294 Sum_probs=95.8
Q ss_pred CCCccccCCCCcCEEEcccccCCCCCCccccCCCCCCeEEccCcccCCCCCCccCCcCccceEEcCCCcccccccccccc
Q 039720 373 TIPPEIRNLFNLNGLGLEYNQLTGTIPPAIGELRNLQYLGLVGNNIRGIIPDPIGNLTLLNVLQLGFNKLQGSIPSYLGK 452 (973)
Q Consensus 373 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 452 (973)
..+..+..+++|+.|+|++|++. .+|..+..+++|++|+|++|.|+ .+|..|+++++|++|+|++|+|+ .+|..|+.
T Consensus 215 ~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 291 (727)
T 4b8c_D 215 MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGS 291 (727)
T ss_dssp -------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGG
T ss_pred cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcC
Confidence 45666777777777777777777 56666667777777777777777 66777777777777777777777 56666666
Q ss_pred ccccccccccCcccccCCCccccccccccceeeccCCcccccCCcccccccccceeccccCcccccccccccCccc-hhh
Q 039720 453 CQNLMQLSAPNNKLNGTLPPQIFGITTLSKLLDLSENHLSGSIPLEVGNLKSLVQLDISRNNFSNEIPVTLSACTT-LEY 531 (973)
Q Consensus 453 l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~-L~~ 531 (973)
+++|+.|+|++|.|. .+|..|+.+++|+.|+|++|.|++.+|..+..+.. +..
T Consensus 292 l~~L~~L~L~~N~l~--------------------------~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~ 345 (727)
T 4b8c_D 292 CFQLKYFYFFDNMVT--------------------------TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLI 345 (727)
T ss_dssp GTTCSEEECCSSCCC--------------------------CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEECCCCCCC--------------------------ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhH
Confidence 666665555555554 34555666677777777777777776766655432 234
Q ss_pred hcccCcccccccccchhhhccCCeecCCCC--------ccccccCCCCCCCCccceEeccCCcCcC
Q 039720 532 LLMQGNSFNGSIPQSLNALKSIKELDLSCN--------NLSGQIPIHLGNLPFLEYLNLSYNHFEG 589 (973)
Q Consensus 532 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N--------~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 589 (973)
|+|++|.+++.+|.. |+.|++++| .|.+..+..+.++..++...+++|-+.+
T Consensus 346 l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 346 FYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLCQ 405 (727)
T ss_dssp HHHHHCCCCCCCCCC-----------------------------------------------CCCG
T ss_pred HhhccCcccCcCccc------cceeEeecccccccccCCccccccchhhcccccceeeeecccccc
Confidence 677777777766653 344555555 3333444445555566666666666653
No 370
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.74 E-value=3.1e-18 Score=181.93 Aligned_cols=138 Identities=18% Similarity=0.162 Sum_probs=109.1
Q ss_pred cCCcCCccccccceeEEEEEECCCCcE--EEEEEeecccch------------------------hHHHHHHHHHHHHhc
Q 039720 675 EFSSSNRIGKGSFGFVYKGNLGEDGMS--VAVKVMNLDKKG------------------------ATKSFVAECEALRNI 728 (973)
Q Consensus 675 ~y~~~~~lg~G~~g~V~~~~~~~~~~~--vavK~~~~~~~~------------------------~~~~~~~e~~~l~~l 728 (973)
-|.+.+.||+|+||.||+|.+..+|+. ||||+++..... ....+.+|+.+++.+
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 367889999999999999999778999 999998643211 123688999999999
Q ss_pred CCCCc--eeEEeEeeecccCCCceEEEEEeeccC-C----CHHHHhhhcCCCchhhHHHHHHHHHHHHHHHH-hcCCCCe
Q 039720 729 RHRNL--IKIITICSSIDFKGADFKAIVYEYMQY-G----SVDDWLHHTNDKLEVGKLNIVIEVASVIEYLH-NHCQPPI 800 (973)
Q Consensus 729 ~h~ni--v~~~~~~~~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH-~~~~~~i 800 (973)
.|+++ ..++++ ...++||||+.+ | +|.++... ..+..+..++.|++.|+.||| +. +|
T Consensus 128 ~~~~i~~p~~~~~---------~~~~lVmE~~g~~g~~~~~L~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~---gi 192 (258)
T 1zth_A 128 KEAGVSVPQPYTY---------MKNVLLMEFIGEDELPAPTLVELGRE---LKELDVEGIFNDVVENVKRLYQEA---EL 192 (258)
T ss_dssp HHTTCCCCCEEEE---------ETTEEEEECCEETTEECCBHHHHGGG---GGGSCHHHHHHHHHHHHHHHHHTS---CE
T ss_pred HhCCCCCCeEEEc---------CCCEEEEEecCCCCCccccHHHHhhc---cChHHHHHHHHHHHHHHHHHHHHC---CE
Confidence 88764 334432 356899999942 3 77776543 234567899999999999999 88 99
Q ss_pred EecCCCCCcEEecCCCcEEEeccccchhc
Q 039720 801 VHGDLKPSNVLLDHDMVAHVSDFGLARFL 829 (973)
Q Consensus 801 vHrDik~~NILl~~~~~~kl~Dfg~a~~~ 829 (973)
+||||||+|||++. .++|+|||+|...
T Consensus 193 vHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 193 VHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp ECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred EeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 99999999999998 9999999999754
No 371
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.73 E-value=2.3e-18 Score=183.52 Aligned_cols=171 Identities=22% Similarity=0.292 Sum_probs=99.1
Q ss_pred CCCCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhcccccccee
Q 039720 84 NLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERL 163 (973)
Q Consensus 84 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L 163 (973)
.+..+..+++++|.++ .++ .+.++++|++|++++|.++ .+| .+..+++|++|++++|++.+..+ +..+++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~-~~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVT-DLV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTT-SEE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCcc-ccc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 4666777788888887 344 5778888888888888877 455 56666666666666665554433 5555666666
Q ss_pred eccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccCCccc
Q 039720 164 SLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFK 243 (973)
Q Consensus 164 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 243 (973)
+|++|++++ +|... . ++|++|+|++|++++ ++ .+.++++|++|+|++|++++. + .+..
T Consensus 91 ~L~~N~l~~-l~~~~-~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~--------------- 148 (263)
T 1xeu_A 91 SVNRNRLKN-LNGIP-S-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-V-MLGF--------------- 148 (263)
T ss_dssp ECCSSCCSC-CTTCC-C-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-G-GGGG---------------
T ss_pred ECCCCccCC-cCccc-c-CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-h-HHcc---------------
Confidence 666666653 33222 2 556666666666553 22 355555555555555555532 1 3444
Q ss_pred cCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCccccc
Q 039720 244 GSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQ 294 (973)
Q Consensus 244 ~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 294 (973)
+++|++|+|++|.|++. ..+..+++|++|+|++|.++..
T Consensus 149 ----------l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 149 ----------LSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp ----------CTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred ----------CCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 45555555555555543 4455555555555555555543
No 372
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.73 E-value=8e-18 Score=171.11 Aligned_cols=153 Identities=17% Similarity=0.229 Sum_probs=106.1
Q ss_pred ccccccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcE
Q 039720 155 GNWLKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDE 234 (973)
Q Consensus 155 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 234 (973)
..+++|++|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|++++..|..++.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 45567777777777777 455 5777777888888877664 3346777777888888887777766777777777777
Q ss_pred EEccCCccccCCCcccccCCCCCcEEEccCCc-ccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceecccc
Q 039720 235 AYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNN-LTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRN 313 (973)
Q Consensus 235 L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 313 (973)
|++++|++++..|..+. .+++|++|++++|. ++ .+| .+..+++|++|++++|++++.. .+..+++|++|++++|
T Consensus 117 L~Ls~n~i~~~~~~~l~-~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~~--~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 117 LDISHSAHDDSILTKIN-TLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDYR--GIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp EECCSSBCBGGGHHHHT-TCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCCT--TGGGCSSCCEEEECBC
T ss_pred EEecCCccCcHhHHHHh-hCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcChH--HhccCCCCCEEEeeCc
Confidence 77777777755555554 67777777777776 55 334 5777777777777777777543 5677777777777777
Q ss_pred cCC
Q 039720 314 NLG 316 (973)
Q Consensus 314 ~l~ 316 (973)
++.
T Consensus 192 ~i~ 194 (197)
T 4ezg_A 192 TIG 194 (197)
T ss_dssp ---
T ss_pred ccC
Confidence 664
No 373
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.73 E-value=2.2e-18 Score=190.47 Aligned_cols=293 Identities=14% Similarity=0.092 Sum_probs=159.2
Q ss_pred cccccCCCcC--CCCCCEEEccCCCCCCCCCccccc-cCCCCEEeeecccCC--CCCCcccccCCCccceEecccccccc
Q 039720 75 GGFLSPYIGN--LSFLRVINLANNSFHGQIPKEVGR-LFRLETIVLSNNSFS--GKIPTNLSRCFNLIDFWVHTNNLVGE 149 (973)
Q Consensus 75 ~g~~~~~l~~--l~~L~~L~L~~n~l~~~~p~~~~~-l~~L~~L~Ls~n~l~--~~~p~~~~~l~~L~~L~l~~n~~~~~ 149 (973)
.|.++..+.. +..++.|.++++ +.+.--..+.. +++|++||||+|++. ...+..+ +.+..+.+..|. .
T Consensus 12 ~g~l~~~l~~~~~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~---I 84 (329)
T 3sb4_A 12 PGTLISMMTEEEANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANF---V 84 (329)
T ss_dssp TTCGGGGSCHHHHHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTE---E
T ss_pred CCcHHhhccchhhCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccc---cccccccccccc---c
Confidence 3445555553 778899998864 22111123444 788999999999987 2222222 223333443332 2
Q ss_pred hhhhhcc--------ccccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCc---
Q 039720 150 IQAIIGN--------WLKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDF--- 218 (973)
Q Consensus 150 ~~~~~~~--------l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l--- 218 (973)
.+..|.+ +++|+.|+|.+ .++..-+..|.+|++|+.|++++|.+....+.+|.+..++..+.+..+..
T Consensus 85 ~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~ 163 (329)
T 3sb4_A 85 PAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRF 163 (329)
T ss_dssp CTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHT
T ss_pred CHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhc
Confidence 2344555 77777777777 66655566677777777777777777656666777777776666655321
Q ss_pred -cccCCccccCCCCCc-EEEccCCccccCCCccccc---CCCCCcEEEccCCcccccCCccc-cCCCCCCEEEccCCccc
Q 039720 219 -SGMFPLSVCNISSLD-EAYLFKNRFKGSLPVCLGF---NLPKLTVLVVAQNNLTGFLPQSL-SNASKLEWLELNENHFS 292 (973)
Q Consensus 219 -~~~~p~~~~~l~~L~-~L~L~~N~l~~~ip~~~~~---~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~ 292 (973)
......+|.++.+|+ .+.+... +.++..++. ...+++.+.+.++-.. .....+ ..+++|++|+|++|+++
T Consensus 164 ~~~i~~~~f~~~~~L~~~i~~~~~---~~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~ 239 (329)
T 3sb4_A 164 KNRWEHFAFIEGEPLETTIQVGAM---GKLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNAT 239 (329)
T ss_dssp STTTTTSCEEESCCCEEEEEECTT---CCHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCC
T ss_pred cccccccccccccccceeEEecCC---CcHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcc
Confidence 222334455555555 3333221 122222221 2344555555444221 111111 12566666666666666
Q ss_pred ccCcccccCcccccceecccccCCCCCCCChhhhhhhcccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCcccc
Q 039720 293 GQVRINFNSLPNLSKLYLGRNNLGTRTSTDLDFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISG 372 (973)
Q Consensus 293 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~ 372 (973)
.+...+|.++++|+.|+|.+| ++.
T Consensus 240 ~I~~~aF~~~~~L~~l~l~~n-i~~------------------------------------------------------- 263 (329)
T 3sb4_A 240 TIPDFTFAQKKYLLKIKLPHN-LKT------------------------------------------------------- 263 (329)
T ss_dssp EECTTTTTTCTTCCEEECCTT-CCE-------------------------------------------------------
T ss_pred eecHhhhhCCCCCCEEECCcc-cce-------------------------------------------------------
Confidence 666666666666666666554 332
Q ss_pred CCCccccCCCCcC-EEEcccccCCCCCCccccCCCCCCeEEccCcccCCCCCCccCCcCccceEE
Q 039720 373 TIPPEIRNLFNLN-GLGLEYNQLTGTIPPAIGELRNLQYLGLVGNNIRGIIPDPIGNLTLLNVLQ 436 (973)
Q Consensus 373 ~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 436 (973)
+.+..|.++.+|+ .+++.+ +++.+.+.+|.++++|+.|++++|+++.+.+..|.++++|+.++
T Consensus 264 I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 264 IGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp ECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred ehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 2233455555555 555555 45545555566666666666655655555555555555555554
No 374
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.72 E-value=6.2e-18 Score=171.91 Aligned_cols=153 Identities=18% Similarity=0.274 Sum_probs=83.3
Q ss_pred cCCCCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccce
Q 039720 83 GNLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIER 162 (973)
Q Consensus 83 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~ 162 (973)
+.+++|++|++++|+++ .+| .+..+++|++|++++|.++ .+. .+..+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~------------------------~l~~l~~L~~ 92 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYN------------------------PISGLSNLER 92 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCG------------------------GGTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cch------------------------hhhcCCCCCE
Confidence 34455556666666555 444 4555556666666555443 122 3344455555
Q ss_pred eeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCC-ccccCCccccCCCCCcEEEccCCc
Q 039720 163 LSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSEND-FSGMFPLSVCNISSLDEAYLFKNR 241 (973)
Q Consensus 163 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~ 241 (973)
|++++|++++..|..|+.+++|++|++++|++++..|..++++++|++|++++|. ++ .+| .+..+++|++|++++|+
T Consensus 93 L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~ 170 (197)
T 4ezg_A 93 LRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDG 170 (197)
T ss_dssp EEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBC
T ss_pred EEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCC
Confidence 5555555555555555556666666666666655455555566666666666665 33 233 45556666666666666
Q ss_pred cccCCCcccccCCCCCcEEEccCCccc
Q 039720 242 FKGSLPVCLGFNLPKLTVLVVAQNNLT 268 (973)
Q Consensus 242 l~~~ip~~~~~~l~~L~~L~Ls~N~l~ 268 (973)
++ .++ .+ ..+++|++|++++|+|.
T Consensus 171 i~-~~~-~l-~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 171 VH-DYR-GI-EDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CC-CCT-TG-GGCSSCCEEEECBC---
T ss_pred Cc-ChH-Hh-ccCCCCCEEEeeCcccC
Confidence 65 333 22 25667777777777665
No 375
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.72 E-value=7.3e-18 Score=179.57 Aligned_cols=150 Identities=18% Similarity=0.264 Sum_probs=86.9
Q ss_pred hccccccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCc
Q 039720 154 IGNWLKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLD 233 (973)
Q Consensus 154 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 233 (973)
+..+++|++|++++|.++ .+| .++.+++|++|+|++|++++..+ +.++++|++|+|++|++++..+ +.. ++|+
T Consensus 37 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~l~~--~~~-~~L~ 109 (263)
T 1xeu_A 37 QKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKNLNG--IPS-ACLS 109 (263)
T ss_dssp HHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSCCTT--CCC-SSCC
T ss_pred hhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCCcCc--ccc-Cccc
Confidence 344555566666666655 334 45566666666666666653322 6666666666666666654222 111 5566
Q ss_pred EEEccCCccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceecccc
Q 039720 234 EAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRN 313 (973)
Q Consensus 234 ~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 313 (973)
+|+|++|+++ .+|. +..+++|++|+|++|+|++. + .+..+++|++|+|++|+|++. ..+..+++|+.|++++|
T Consensus 110 ~L~L~~N~l~-~~~~--l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N 182 (263)
T 1xeu_A 110 RLFLDNNELR-DTDS--LIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQ 182 (263)
T ss_dssp EEECCSSCCS-BSGG--GTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEE
T ss_pred EEEccCCccC-CChh--hcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCC
Confidence 6666666665 2332 22566666666666666643 2 566666666666666666655 45666666666666666
Q ss_pred cCCC
Q 039720 314 NLGT 317 (973)
Q Consensus 314 ~l~~ 317 (973)
++..
T Consensus 183 ~~~~ 186 (263)
T 1xeu_A 183 KCVN 186 (263)
T ss_dssp EEEC
T ss_pred cccC
Confidence 6554
No 376
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.71 E-value=5.4e-18 Score=171.43 Aligned_cols=156 Identities=23% Similarity=0.284 Sum_probs=116.3
Q ss_pred cccccCcccccCCCccccccccccceeeccCCcccccCCc-ccccccccceeccccCcccccccccccCccchhhhcccC
Q 039720 458 QLSAPNNKLNGTLPPQIFGITTLSKLLDLSENHLSGSIPL-EVGNLKSLVQLDISRNNFSNEIPVTLSACTTLEYLLMQG 536 (973)
Q Consensus 458 ~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~ 536 (973)
.+++++|.+. .+|..++. .++.|++++|++++..+. .|+.+++|+.|+|++|++++..|..|.++++|++|+|++
T Consensus 12 ~l~~s~~~l~-~ip~~~~~---~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 12 TVDCTGRGLK-EIPRDIPL---HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EEECTTSCCS-SCCSCCCT---TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred EEEcCCCCcC-cCccCCCC---CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 4444444443 44544332 224677777777755554 478889999999999999988888999999999999999
Q ss_pred cccccccccchhhhccCCeecCCCCccccccCCCCCCCCccceEeccCCcCcCcCCCCCCCCCccccccccCccccCCCC
Q 039720 537 NSFNGSIPQSLNALKSIKELDLSCNNLSGQIPIHLGNLPFLEYLNLSYNHFEGKVPKKGVFSNETRISLTGNEQFCGGLG 616 (973)
Q Consensus 537 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~l~~~~N~~~cg~~~ 616 (973)
|+|++..|..|..+++|++|+|++|+|++..|..+..+++|++|+|++|++++..+.......++...+.++...|+.|.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P~ 167 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPS 167 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSST
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCCh
Confidence 99998888888899999999999999998889999999999999999999988766432112233334556666777665
Q ss_pred C
Q 039720 617 E 617 (973)
Q Consensus 617 ~ 617 (973)
.
T Consensus 168 ~ 168 (192)
T 1w8a_A 168 K 168 (192)
T ss_dssp T
T ss_pred H
Confidence 4
No 377
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.69 E-value=5.6e-18 Score=187.26 Aligned_cols=289 Identities=16% Similarity=0.169 Sum_probs=146.3
Q ss_pred cchhhhhcc--ccccceeeccCCcccccCCCCCCC-CCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCc
Q 039720 148 GEIQAIIGN--WLKIERLSLYGNQLTGQLPPSIGN-LSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPL 224 (973)
Q Consensus 148 ~~~~~~~~~--l~~L~~L~L~~n~l~~~~p~~~~~-l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~ 224 (973)
|.++..+.. +.++++|.++++- ...--..+.. +++|++|||++|++. .....-+.++.++.+.+..|.| .+.
T Consensus 13 g~l~~~l~~~~~~~l~~L~l~g~i-~~~~~~~l~~~l~~L~~LdLs~n~i~-~~~~~~~~~~~~~~~~~~~~~I---~~~ 87 (329)
T 3sb4_A 13 GTLISMMTEEEANSITHLTLTGKL-NAEDFRHLRDEFPSLKVLDISNAEIK-MYSGKAGTYPNGKFYIYMANFV---PAY 87 (329)
T ss_dssp TCGGGGSCHHHHHHCSEEEEEEEE-CHHHHHHHHHSCTTCCEEEEEEEEEC-CEEESSSSSGGGCCEEECTTEE---CTT
T ss_pred CcHHhhccchhhCceeEEEEeccc-cHHHHHHHHHhhccCeEEecCcceeE-EecCcccccccccccccccccc---CHH
Confidence 344444443 6778888888652 1111112223 677888888888887 1111112233345555555532 234
Q ss_pred cccC--------CCCCcEEEccCCccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCc----cc
Q 039720 225 SVCN--------ISSLDEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENH----FS 292 (973)
Q Consensus 225 ~~~~--------l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~----l~ 292 (973)
+|.+ +++|++++|.. .++ .|+...|.++++|+.|++++|.++.+.+.+|.++.++.++.++.+. ..
T Consensus 88 aF~~~~~~~~~g~~~L~~l~L~~-~i~-~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~ 165 (329)
T 3sb4_A 88 AFSNVVNGVTKGKQTLEKVILSE-KIK-NIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKN 165 (329)
T ss_dssp TTEEEETTEEEECTTCCC-CBCT-TCC-EECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTST
T ss_pred HhcccccccccccCCCcEEECCc-ccc-chhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccc
Confidence 5555 66666666666 555 5666666666666666666666665666666666666555555432 12
Q ss_pred ccCcccccCccccc-ceecccccCCCCCCCChhhhhhhcccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCccc
Q 039720 293 GQVRINFNSLPNLS-KLYLGRNNLGTRTSTDLDFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQIS 371 (973)
Q Consensus 293 ~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~ 371 (973)
.....+|.++.+|+ .+.+.... .++. .....-....++..+.+.++-.. .-...+.
T Consensus 166 ~i~~~~f~~~~~L~~~i~~~~~~--~l~~---~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~----------------- 222 (329)
T 3sb4_A 166 RWEHFAFIEGEPLETTIQVGAMG--KLED---EIMKAGLQPRDINFLTIEGKLDN-ADFKLIR----------------- 222 (329)
T ss_dssp TTTTSCEEESCCCEEEEEECTTC--CHHH---HHHHTTCCGGGCSEEEEEECCCH-HHHHHHH-----------------
T ss_pred cccccccccccccceeEEecCCC--cHHH---HHhhcccCccccceEEEeeeecH-HHHHHHH-----------------
Confidence 22333444444444 23222111 0000 00000001122222222221000 0000000
Q ss_pred cCCCccccCCCCcCEEEcccccCCCCCCccccCCCCCCeEEccCcccCCCCCCccCCcCccc-eEEcCCCcccccccccc
Q 039720 372 GTIPPEIRNLFNLNGLGLEYNQLTGTIPPAIGELRNLQYLGLVGNNIRGIIPDPIGNLTLLN-VLQLGFNKLQGSIPSYL 450 (973)
Q Consensus 372 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~ 450 (973)
..+++|+.|+|++|+++.+.+.+|.++++|+.|+|.+| ++.+.+..|.++++|+ .+++.+ .++...+.+|
T Consensus 223 -------~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF 293 (329)
T 3sb4_A 223 -------DYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAF 293 (329)
T ss_dssp -------HHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTT
T ss_pred -------HhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhh
Confidence 12456666666666666555556666666666666665 5555555666666666 666666 5554445666
Q ss_pred ccccccccccccCcccccCCCccccc
Q 039720 451 GKCQNLMQLSAPNNKLNGTLPPQIFG 476 (973)
Q Consensus 451 ~~l~~L~~L~l~~N~l~~~~p~~~~~ 476 (973)
..+++|+.+++++|.+. .++...|.
T Consensus 294 ~~c~~L~~l~l~~n~i~-~I~~~aF~ 318 (329)
T 3sb4_A 294 MGCDNLRYVLATGDKIT-TLGDELFG 318 (329)
T ss_dssp TTCTTEEEEEECSSCCC-EECTTTTC
T ss_pred hCCccCCEEEeCCCccC-ccchhhhc
Confidence 66666666666666666 45544443
No 378
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.66 E-value=2.8e-16 Score=158.83 Aligned_cols=125 Identities=22% Similarity=0.283 Sum_probs=62.8
Q ss_pred EeeccCccccccCCCcCCCCCCEEEccCCCCCCCCCc-cccccCCCCEEeeecccCCCCCCcccccCCCccceEeccccc
Q 039720 68 DLESQNIGGFLSPYIGNLSFLRVINLANNSFHGQIPK-EVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNL 146 (973)
Q Consensus 68 ~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~-~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~ 146 (973)
+++++++ +.+|..+.. +|++|+|++|++++..+. .|+++++|++|+|++|.+++..|..|+.+
T Consensus 14 ~~s~~~l-~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l------------- 77 (192)
T 1w8a_A 14 DCTGRGL-KEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGA------------- 77 (192)
T ss_dssp ECTTSCC-SSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTC-------------
T ss_pred EcCCCCc-CcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCc-------------
Confidence 3444444 245554433 566666666666543332 25566666666666666654444444333
Q ss_pred ccchhhhhccccccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCcc
Q 039720 147 VGEIQAIIGNWLKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFS 219 (973)
Q Consensus 147 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~ 219 (973)
++|++|+|++|++++..|..|+++++|++|+|++|+|++..|..|..+++|++|+|++|.+.
T Consensus 78 -----------~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 139 (192)
T 1w8a_A 78 -----------SHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp -----------TTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred -----------ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCcc
Confidence 34444444444444444444444555555555555555444444444555555555444444
No 379
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.65 E-value=3.3e-16 Score=154.71 Aligned_cols=134 Identities=19% Similarity=0.270 Sum_probs=101.0
Q ss_pred CCCCCCEEEccCCCCC-CCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccce
Q 039720 84 NLSFLRVINLANNSFH-GQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIER 162 (973)
Q Consensus 84 ~l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~ 162 (973)
..++|++|+|++|+++ +.+|..+..+++|++|+|++|.+++. ..++.+++|++|++++|++.+.+|..+.++++|++
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 3477888999988887 78888888888899999998888754 67777777777777777777767777777777777
Q ss_pred eeccCCcccccC-CCCCCCCCcccEEEccCCcCCCCCC---CcccCCCccceeccCCCCcc
Q 039720 163 LSLYGNQLTGQL-PPSIGNLSALQTFDIAGNKLDGRIP---DSLGQLRNLNYLGTSENDFS 219 (973)
Q Consensus 163 L~L~~n~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~L~~L~~L~Ls~N~l~ 219 (973)
|+|++|.+++.. +..++.+++|++|++++|++++..+ ..+..+++|++|++++|.+.
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 777777777431 2567777777777777777774443 36777777777777777765
No 380
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.64 E-value=5.5e-16 Score=153.08 Aligned_cols=136 Identities=21% Similarity=0.206 Sum_probs=84.1
Q ss_pred cccceeeccCCccc-ccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEE
Q 039720 158 LKIERLSLYGNQLT-GQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAY 236 (973)
Q Consensus 158 ~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 236 (973)
++|++|+|++|.++ +.+|..+..+++|++|++++|++++. ..+..+++|++|+|++|++++.+|..+.
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~--------- 92 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAE--------- 92 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHH---------
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHh---------
Confidence 55666666666665 55566666666666666666666533 5555566666666666655543333333
Q ss_pred ccCCccccCCCcccccCCCCCcEEEccCCcccccC-CccccCCCCCCEEEccCCcccccCc---ccccCcccccceeccc
Q 039720 237 LFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFL-PQSLSNASKLEWLELNENHFSGQVR---INFNSLPNLSKLYLGR 312 (973)
Q Consensus 237 L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~~---~~~~~l~~L~~L~L~~ 312 (973)
++++|++|+|++|.|++.. +..+..+++|++|+|++|.+++..+ ..|..+++|++|++++
T Consensus 93 ----------------~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~ 156 (168)
T 2ell_A 93 ----------------KLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYD 156 (168)
T ss_dssp ----------------HCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEE
T ss_pred ----------------hCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCC
Confidence 4566666666666666432 2567777777777777777776555 4677777777777777
Q ss_pred ccCCCCCC
Q 039720 313 NNLGTRTS 320 (973)
Q Consensus 313 N~l~~~~~ 320 (973)
|.+..++.
T Consensus 157 n~~~~~~~ 164 (168)
T 2ell_A 157 REDQEAPD 164 (168)
T ss_dssp TTSCBCCS
T ss_pred CChhhccc
Confidence 77665543
No 381
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.62 E-value=3e-16 Score=151.59 Aligned_cols=130 Identities=18% Similarity=0.259 Sum_probs=99.1
Q ss_pred CCCCCCEEEccCCCCC-CCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccce
Q 039720 84 NLSFLRVINLANNSFH-GQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIER 162 (973)
Q Consensus 84 ~l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~ 162 (973)
..++|+.|++++|+++ +.+|..++.+++|++|+|++|.+++. ..++.+++|++|++++|.+.+.+|..+..+++|++
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 3467888888888887 77888888888888888888888754 66777777777777777777777777777788888
Q ss_pred eeccCCccccc-CCCCCCCCCcccEEEccCCcCCCCCC---CcccCCCccceeccCC
Q 039720 163 LSLYGNQLTGQ-LPPSIGNLSALQTFDIAGNKLDGRIP---DSLGQLRNLNYLGTSE 215 (973)
Q Consensus 163 L~L~~n~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~L~~L~~L~Ls~ 215 (973)
|++++|.+++. .+..++++++|++|++++|++++..+ ..+..+++|++|++++
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 88888887753 34667777888888888888775444 4677777777777753
No 382
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.61 E-value=2.3e-15 Score=151.99 Aligned_cols=109 Identities=25% Similarity=0.299 Sum_probs=57.3
Q ss_pred CCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccccceeec
Q 039720 86 SFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSL 165 (973)
Q Consensus 86 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L 165 (973)
+.|++|+|++|+|+ .+|..|.++++|++|+|++|.+++..|.. |..+++|++|+|
T Consensus 31 ~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~------------------------f~~l~~L~~L~L 85 (193)
T 2wfh_A 31 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQS------------------------FSNMTQLLTLIL 85 (193)
T ss_dssp TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTT------------------------TTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhH------------------------ccCCCCCCEEEC
Confidence 35555566655555 45555555555555555555555333332 333344555555
Q ss_pred cCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCcc
Q 039720 166 YGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFS 219 (973)
Q Consensus 166 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~ 219 (973)
++|++++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|.+.
T Consensus 86 s~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 86 SYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 555555444455555555555555555555433344555555555555555543
No 383
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.60 E-value=1.4e-14 Score=163.49 Aligned_cols=254 Identities=13% Similarity=0.113 Sum_probs=137.2
Q ss_pred CCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccCCccccCCCcccccCC
Q 039720 175 PPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFKGSLPVCLGFNL 254 (973)
Q Consensus 175 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l 254 (973)
...|.++ +|+.+.+..| ++.....+|.+ .+|+.+.+.. .++.+-+.+|.++.+|+.+++..|+++ .+|...|. .
T Consensus 129 ~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~-~ 202 (401)
T 4fdw_A 129 KDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKIT-KLPASTFV-Y 202 (401)
T ss_dssp TTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCS-EECTTTTT-T
T ss_pred HhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcce-EechhhEe-e
Confidence 3344443 4555555444 33233334444 2455555543 344444445555555555555555554 45555443 3
Q ss_pred CCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceecccccCCCCCCCChhhhhhhccccc
Q 039720 255 PKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNLGTRTSTDLDFITLLTNCSK 334 (973)
Q Consensus 255 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~ 334 (973)
.+|+.+.|.++ ++.+...+|.++++|+.++|..| ++.+...+|.+ .+|+.+.| .|.++.+... .+.+|++
T Consensus 203 ~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~------aF~~c~~ 272 (401)
T 4fdw_A 203 AGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASR------AFYYCPE 272 (401)
T ss_dssp CCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTT------TTTTCTT
T ss_pred cccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChh------HhhCCCC
Confidence 55555555532 44444555555555555555543 44444555555 45555555 2334333332 2234444
Q ss_pred ceeeccccccccCCCChhhhhhhhhhhHhhhcCCccccCCCccccCCCCcCEEEcccccCCCCCCccccCCCCCCeEEcc
Q 039720 335 LVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEIRNLFNLNGLGLEYNQLTGTIPPAIGELRNLQYLGLV 414 (973)
Q Consensus 335 L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 414 (973)
|+.+.+..|.+. .+.+....+..|..+++|+.++|. +.++.+...+|.++++|+.++|.
T Consensus 273 L~~l~l~~~~~~--------------------~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp 331 (401)
T 4fdw_A 273 LAEVTTYGSTFN--------------------DDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIP 331 (401)
T ss_dssp CCEEEEESSCCC--------------------CCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEEC
T ss_pred CCEEEeCCcccc--------------------CCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEEC
Confidence 444444433322 111122345567777788888887 44666667777778888888885
Q ss_pred CcccCCCCCCccCCcCccceEEcCCCcccccccccccccc-ccccccccCcccc
Q 039720 415 GNNIRGIIPDPIGNLTLLNVLQLGFNKLQGSIPSYLGKCQ-NLMQLSAPNNKLN 467 (973)
Q Consensus 415 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~l~~N~l~ 467 (973)
.| ++.+....|.++ +|+.+++++|.+....+..|..++ +++.|++..+.+.
T Consensus 332 ~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 332 AN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp TT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred cc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 44 665666777777 788888888777755556666664 5666666666544
No 384
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.59 E-value=5.9e-15 Score=148.99 Aligned_cols=127 Identities=26% Similarity=0.380 Sum_probs=80.9
Q ss_pred ceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccCC
Q 039720 161 ERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKN 240 (973)
Q Consensus 161 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 240 (973)
+.+++++|.++ .+|..+. ++|++|+|++|+|+ .+|..|.++++|++|+|++|.|++..+.+|.+++
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~---------- 78 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMT---------- 78 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCT----------
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCC----------
Confidence 46777777777 5666553 46777777777776 6667777777777777777777765555555444
Q ss_pred ccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceecccccCC
Q 039720 241 RFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNLG 316 (973)
Q Consensus 241 ~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 316 (973)
+|++|+|++|.|++..|..|.++++|++|+|++|+|+.+.+..|..+++|+.|+|++|.+.
T Consensus 79 ---------------~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 79 ---------------QLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp ---------------TCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ---------------CCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 4555555555555455555566666666666666666555555666666666666666654
No 385
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.59 E-value=1.6e-15 Score=146.38 Aligned_cols=128 Identities=22% Similarity=0.232 Sum_probs=79.4
Q ss_pred ccccceeeccCCccc-ccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEE
Q 039720 157 WLKIERLSLYGNQLT-GQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEA 235 (973)
Q Consensus 157 l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 235 (973)
.++|++|++++|.++ +.+|..++.+++|++|++++|++++. ..++++++|++|++++|.+++.+|..+.+
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~------- 86 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEK------- 86 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHH-------
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhh-------
Confidence 356777777777776 66777777777777777777777644 55666777777777777666544444444
Q ss_pred EccCCccccCCCcccccCCCCCcEEEccCCccccc-CCccccCCCCCCEEEccCCcccccCc---ccccCcccccceecc
Q 039720 236 YLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGF-LPQSLSNASKLEWLELNENHFSGQVR---INFNSLPNLSKLYLG 311 (973)
Q Consensus 236 ~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~~---~~~~~l~~L~~L~L~ 311 (973)
+++|++|++++|.+++. .+..+..+++|++|++++|++++..+ ..+..+++|++|+++
T Consensus 87 ------------------l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 87 ------------------CPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ------------------CTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ------------------CCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 44555555555555542 23555666666666666666665544 356666666666654
No 386
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.58 E-value=3.9e-14 Score=159.71 Aligned_cols=219 Identities=9% Similarity=0.059 Sum_probs=120.9
Q ss_pred cceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccC
Q 039720 160 IERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFK 239 (973)
Q Consensus 160 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 239 (973)
|+.+.+.. .++..-+..|.+|++|+.+++.+|+++.....+|. ..+|+.+.|..+ ++.+-..+|.++++|+.+.+..
T Consensus 159 L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~ 235 (401)
T 4fdw_A 159 VQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPE 235 (401)
T ss_dssp CCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCT
T ss_pred ceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCC
Confidence 44444443 33333334455555555555555555432223333 345555555422 4434444455555555555544
Q ss_pred CccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCccc-----ccCcccccCcccccceeccccc
Q 039720 240 NRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFS-----GQVRINFNSLPNLSKLYLGRNN 314 (973)
Q Consensus 240 N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-----~~~~~~~~~l~~L~~L~L~~N~ 314 (973)
| ++ .|+...|.+ .+|+.+.+ .+.++.+...+|.++++|+.+++.+|.+. .+...+|.++++|+.++|.+ .
T Consensus 236 ~-l~-~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~ 310 (401)
T 4fdw_A 236 N-VS-TIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-S 310 (401)
T ss_dssp T-CC-EECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-T
T ss_pred C-cc-Ccccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-c
Confidence 3 22 344444433 44555555 23344344445555555555555544443 23344444444444444431 1
Q ss_pred CCCCCCCChhhhhhhcccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCccccCCCccccCCCCcCEEEcccccC
Q 039720 315 LGTRTSTDLDFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEIRNLFNLNGLGLEYNQL 394 (973)
Q Consensus 315 l~~~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l 394 (973)
++ ......|.++++|+.+.|..| +
T Consensus 311 i~-------------------------------------------------------~I~~~aF~~c~~L~~l~lp~~-l 334 (401)
T 4fdw_A 311 IR-------------------------------------------------------ILGQGLLGGNRKVTQLTIPAN-V 334 (401)
T ss_dssp CC-------------------------------------------------------EECTTTTTTCCSCCEEEECTT-C
T ss_pred eE-------------------------------------------------------EEhhhhhcCCCCccEEEECcc-c
Confidence 22 233456778888888888654 7
Q ss_pred CCCCCccccCCCCCCeEEccCcccCCCCCCccCCcC-ccceEEcCCCccc
Q 039720 395 TGTIPPAIGELRNLQYLGLVGNNIRGIIPDPIGNLT-LLNVLQLGFNKLQ 443 (973)
Q Consensus 395 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~ 443 (973)
+.+.+.+|.++ +|+.+++++|.+....+..|.+++ .++.|++..+.+.
T Consensus 335 ~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 335 TQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp CEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred cEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 76777888888 899999999988877777788774 7888888887765
No 387
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.58 E-value=1.6e-15 Score=166.66 Aligned_cols=137 Identities=15% Similarity=0.210 Sum_probs=103.7
Q ss_pred cCCcCCccccccceeEEEEEECCCCcEEEEEEeecccch----------------------hHHHHHHHHHHHHhcCCCC
Q 039720 675 EFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKG----------------------ATKSFVAECEALRNIRHRN 732 (973)
Q Consensus 675 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~e~~~l~~l~h~n 732 (973)
-|.+.+.||+|+||.||+|.+. +|+.||||+++..... ......+|+..|.++.+.+
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4899999999999999999984 7999999998632100 0112345777788876554
Q ss_pred ce--eEEeEeeecccCCCceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcE
Q 039720 733 LI--KIITICSSIDFKGADFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNV 810 (973)
Q Consensus 733 iv--~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NI 810 (973)
+. ..+++ ...++||||++|+++..+.. ......++.|++.++.|||+. |||||||||.||
T Consensus 175 v~vp~p~~~---------~~~~LVME~i~G~~L~~l~~------~~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NI 236 (397)
T 4gyi_A 175 FPVPEPIAQ---------SRHTIVMSLVDALPMRQVSS------VPDPASLYADLIALILRLAKH---GLIHGDFNEFNI 236 (397)
T ss_dssp CSCCCEEEE---------ETTEEEEECCSCEEGGGCCC------CSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSE
T ss_pred CCCCeeeec---------cCceEEEEecCCccHhhhcc------cHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHE
Confidence 43 22322 23479999999988866532 233567899999999999998 999999999999
Q ss_pred EecCCC----------cEEEeccccchhcc
Q 039720 811 LLDHDM----------VAHVSDFGLARFLS 830 (973)
Q Consensus 811 Ll~~~~----------~~kl~Dfg~a~~~~ 830 (973)
|+++++ .+.|+||+-+....
T Consensus 237 Ll~~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 237 LIREEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp EEEEEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred EEeCCCCcccccccccceEEEEeCCcccCC
Confidence 998776 38999999876543
No 388
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.57 E-value=1.3e-14 Score=144.49 Aligned_cols=129 Identities=21% Similarity=0.294 Sum_probs=73.2
Q ss_pred cceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccC
Q 039720 160 IERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFK 239 (973)
Q Consensus 160 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 239 (973)
.+.+++++|+++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|++++..+..|.++++|++|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 356666777666 4554443 5677777777777755555666777777777777776654444455444444444444
Q ss_pred CccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceecccccCC
Q 039720 240 NRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNLG 316 (973)
Q Consensus 240 N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 316 (973)
|++ ++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|.+.
T Consensus 86 N~l-------------------------~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 137 (177)
T 2o6r_A 86 NKL-------------------------QSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 137 (177)
T ss_dssp SCC-------------------------CCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CCc-------------------------cccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCee
Confidence 444 4444444455555555555555555444444455555555555555544
No 389
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.57 E-value=7.6e-15 Score=146.20 Aligned_cols=132 Identities=18% Similarity=0.229 Sum_probs=81.1
Q ss_pred CceeeeEeeCCCCeEEEEEeeccCccccccCCCcCCCCCCEEEccCCCCCCCCCccccccCCCCEEeeecccCCCCCCcc
Q 039720 50 CQWTGVTCGHRHQRVTKLDLESQNIGGFLSPYIGNLSFLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNSFSGKIPTN 129 (973)
Q Consensus 50 c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~ 129 (973)
|.|.+|.|+.. ++. .+|..+ .++|++|+|++|++++..+..|+++++|++|+|++|.+++..+..
T Consensus 7 C~~~~l~~~~~------------~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 71 (177)
T 2o6r_A 7 CSGTEIRCNSK------------GLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGV 71 (177)
T ss_dssp EETTEEECCSS------------CCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTT
T ss_pred eCCCEEEecCC------------CCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhH
Confidence 67888888643 232 244333 367888888888888655566788888888888888887433333
Q ss_pred cccCCCccceEecccccccchhhhhccccccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccc
Q 039720 130 LSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLN 209 (973)
Q Consensus 130 ~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ 209 (973)
++. +++|++|+|++|++++..+..|.++++|++|++++|++++..+..|..+++|+
T Consensus 72 ~~~------------------------l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 127 (177)
T 2o6r_A 72 FDK------------------------LTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQ 127 (177)
T ss_dssp TTT------------------------CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCC
T ss_pred ccC------------------------CCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccC
Confidence 333 34555555555555544444455566666666666666544444455566666
Q ss_pred eeccCCCCccc
Q 039720 210 YLGTSENDFSG 220 (973)
Q Consensus 210 ~L~Ls~N~l~~ 220 (973)
+|+|++|.+.+
T Consensus 128 ~L~l~~N~~~~ 138 (177)
T 2o6r_A 128 KIWLHTNPWDC 138 (177)
T ss_dssp EEECCSSCBCC
T ss_pred EEEecCCCeec
Confidence 66666665553
No 390
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.52 E-value=1.2e-16 Score=162.54 Aligned_cols=133 Identities=23% Similarity=0.247 Sum_probs=67.2
Q ss_pred CCCCEEEccCCCCCCCCCc------cccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccc
Q 039720 86 SFLRVINLANNSFHGQIPK------EVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLK 159 (973)
Q Consensus 86 ~~L~~L~L~~n~l~~~~p~------~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~ 159 (973)
..++.++++.+.++|.+|. .++++++|++|+|++|.+++ +| .+..+++|+.|++++|.+. .+|..+..+++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCc
Confidence 3444444444444444443 45555555555555555553 44 4444555555555444444 33444444455
Q ss_pred cceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCC-CcccCCCccceeccCCCCccccCC
Q 039720 160 IERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIP-DSLGQLRNLNYLGTSENDFSGMFP 223 (973)
Q Consensus 160 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~L~~L~~L~Ls~N~l~~~~p 223 (973)
|++|+|++|++++ +| .++++++|++|++++|++++..+ ..+..+++|++|++++|.+.+..|
T Consensus 95 L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 157 (198)
T 1ds9_A 95 LEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp CSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHH
T ss_pred CCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccc
Confidence 5555555555553 33 35555555666666665552211 245555666666666665554433
No 391
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.52 E-value=2.5e-13 Score=153.82 Aligned_cols=331 Identities=11% Similarity=0.033 Sum_probs=156.0
Q ss_pred hhhhhccccccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCC
Q 039720 150 IQAIIGNWLKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNI 229 (973)
Q Consensus 150 ~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l 229 (973)
...+|.++.+|+.+.|..+ ++..-...|.++++|+.+++.++ ++..-..+|.++.+|+.+.+..+ +..+-..+|.+.
T Consensus 63 g~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~ 139 (394)
T 4fs7_A 63 GYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGC 139 (394)
T ss_dssp CTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTC
T ss_pred HHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeecc
Confidence 3445555566666666533 44344455666666666666544 44333455666666666655543 332334444444
Q ss_pred CCCcEEEccCCccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCccccccee
Q 039720 230 SSLDEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLY 309 (973)
Q Consensus 230 ~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 309 (973)
..++...... .. .+....|.++++|+.+.+.++. +.+....|.++.+|+.+++..| ++.+...+|.++..|+.+.
T Consensus 140 ~~~~~~~~~~--~~-~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~ 214 (394)
T 4fs7_A 140 DFKEITIPEG--VT-VIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENME 214 (394)
T ss_dssp CCSEEECCTT--CC-EECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCC
T ss_pred cccccccCcc--cc-ccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceee
Confidence 3222221111 11 2233333344444444444332 2133334444444444444433 3333333444444444443
Q ss_pred cccccCCCCCCCChhhhhhhcccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCccccCCCccccCCCCcCEEEc
Q 039720 310 LGRNNLGTRTSTDLDFITLLTNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEIRNLFNLNGLGL 389 (973)
Q Consensus 310 L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~L 389 (973)
+..+.. .+...+....+|+.+.+
T Consensus 215 ~~~~~~---------------------------------------------------------~i~~~~~~~~~l~~i~i 237 (394)
T 4fs7_A 215 FPNSLY---------------------------------------------------------YLGDFALSKTGVKNIII 237 (394)
T ss_dssp CCTTCC---------------------------------------------------------EECTTTTTTCCCCEEEE
T ss_pred cCCCce---------------------------------------------------------EeehhhcccCCCceEEE
Confidence 332211 01111222334455544
Q ss_pred ccccCCCCCCccccCCCCCCeEEccCcccCCCCCCccCCcCccceEEcCCCccccccccccccccccccccccCcccccC
Q 039720 390 EYNQLTGTIPPAIGELRNLQYLGLVGNNIRGIIPDPIGNLTLLNVLQLGFNKLQGSIPSYLGKCQNLMQLSAPNNKLNGT 469 (973)
Q Consensus 390 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 469 (973)
..+ ++.+....|..+.+|+.+.+..+... +....|..+..++.+....+.+. ...|..+.+|+.+.+.++
T Consensus 238 p~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~----- 307 (394)
T 4fs7_A 238 PDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS----- 307 (394)
T ss_dssp CTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-----
T ss_pred CCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccccc-----
Confidence 322 22233444555555555555544332 34445555555555554443321 223444444444433222
Q ss_pred CCccccccccccceeeccCCcccccCCcccccccccceeccccCcccccccccccCccchhhhcccCcccccccccchhh
Q 039720 470 LPPQIFGITTLSKLLDLSENHLSGSIPLEVGNLKSLVQLDISRNNFSNEIPVTLSACTTLEYLLMQGNSFNGSIPQSLNA 549 (973)
Q Consensus 470 ~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 549 (973)
++..-...|.++.+|+.++|.++ ++..-..+|.+|.+|+.+++..| ++..-..+|.+
T Consensus 308 ---------------------i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~ 364 (394)
T 4fs7_A 308 ---------------------VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQG 364 (394)
T ss_dssp ---------------------CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTT
T ss_pred ---------------------cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhC
Confidence 22222344556666666666543 54344556666667777666655 55444556677
Q ss_pred hccCCeecCCCCccccccCCCCCCCCccceE
Q 039720 550 LKSIKELDLSCNNLSGQIPIHLGNLPFLEYL 580 (973)
Q Consensus 550 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 580 (973)
+.+|+.+++..+ ++ .+...|.++++|+.+
T Consensus 365 C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 365 CINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp CTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred CCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 777777777654 22 334566677766654
No 392
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.51 E-value=3.4e-16 Score=159.15 Aligned_cols=154 Identities=26% Similarity=0.353 Sum_probs=88.7
Q ss_pred cCCCCcCEEEcccccCCCCCCc------cccCCCCCCeEEccCcccCCCCCCccCCcCccceEEcCCCcccccccccccc
Q 039720 379 RNLFNLNGLGLEYNQLTGTIPP------AIGELRNLQYLGLVGNNIRGIIPDPIGNLTLLNVLQLGFNKLQGSIPSYLGK 452 (973)
Q Consensus 379 ~~l~~L~~L~Ls~N~l~~~~p~------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 452 (973)
.....++.++++.|.+++.+|. .|..+++|++|+|++|++++ +| .+..+++|++|++++|+++ .+|..+..
T Consensus 15 ~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~ 91 (198)
T 1ds9_A 15 EERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAV 91 (198)
T ss_dssp HHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHH
T ss_pred HhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhc
Confidence 3444566666777777666665 67777777777777777765 44 6666677777777777666 45555555
Q ss_pred ccccccccccCcccccCCCccccccccccceeeccCCcccccCCcccccccccceeccccCccccccc-ccccCccchhh
Q 039720 453 CQNLMQLSAPNNKLNGTLPPQIFGITTLSKLLDLSENHLSGSIPLEVGNLKSLVQLDISRNNFSNEIP-VTLSACTTLEY 531 (973)
Q Consensus 453 l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p-~~~~~l~~L~~ 531 (973)
+++|+.|++++|+++ + +| .+..+++|+.|++++|++++..+ ..+..+++|++
T Consensus 92 ~~~L~~L~L~~N~l~-------------------------~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~ 144 (198)
T 1ds9_A 92 ADTLEELWISYNQIA-------------------------S-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLED 144 (198)
T ss_dssp HHHCSEEEEEEEECC-------------------------C-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSE
T ss_pred CCcCCEEECcCCcCC-------------------------c-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCE
Confidence 555555555444443 1 12 34455666666666666653221 24555555666
Q ss_pred hcccCcccccccccc----------hhhhccCCeecCCCCccc
Q 039720 532 LLMQGNSFNGSIPQS----------LNALKSIKELDLSCNNLS 564 (973)
Q Consensus 532 L~L~~N~l~~~~p~~----------~~~l~~L~~L~Ls~N~l~ 564 (973)
|++++|++++.+|.. +..+++|+.|| +|.++
T Consensus 145 L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 145 LLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp EEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred EEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 666666555444432 45555555554 44443
No 393
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.51 E-value=3e-13 Score=153.15 Aligned_cols=318 Identities=11% Similarity=0.036 Sum_probs=207.0
Q ss_pred ccccCCCCCCCCCcccEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccCCccccCCCcc
Q 039720 170 LTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFKGSLPVC 249 (973)
Q Consensus 170 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~ 249 (973)
++..-...|.++++|+.+.|..+ ++..-..+|.++++|+.+++.++ ++.+-..+|.++.+|+.+.+..+ +. .+...
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~-~i~~~ 134 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LK-SIGVE 134 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CC-EECTT
T ss_pred EeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-ee-eecce
Confidence 45445567889999999999754 76455678999999999999765 66566677888888887766544 33 45555
Q ss_pred cccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceecccccCCCCCCCChhhhhhh
Q 039720 250 LGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNLGTRTSTDLDFITLL 329 (973)
Q Consensus 250 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l 329 (973)
.|.+...+....... +......+|.++++|+.+.+.++. ..+...+|.++.+|+.+.+..| ++.
T Consensus 135 aF~~~~~~~~~~~~~--~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~------------ 198 (394)
T 4fs7_A 135 AFKGCDFKEITIPEG--VTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKI------------ 198 (394)
T ss_dssp TTTTCCCSEEECCTT--CCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCE------------
T ss_pred eeecccccccccCcc--ccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceE------------
Confidence 554544333322222 222345567777777777776543 3355566666666666665443 211
Q ss_pred cccccceeeccccccccCCCChhhhhhhhhhhHhhhcCCccccCCCccccCCCCcCEEEcccccCCCCCCccccCCCCCC
Q 039720 330 TNCSKLVKLGLVFNRFGGALPHSIANLSTTMTLIAMAGNQISGTIPPEIRNLFNLNGLGLEYNQLTGTIPPAIGELRNLQ 409 (973)
Q Consensus 330 ~~l~~L~~L~l~~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 409 (973)
.....|.++..|+.+.+..+... +.+.+....+|+
T Consensus 199 -------------------------------------------I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~ 233 (394)
T 4fs7_A 199 -------------------------------------------IRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVK 233 (394)
T ss_dssp -------------------------------------------ECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCC
T ss_pred -------------------------------------------eCchhhccccccceeecCCCceE--eehhhcccCCCc
Confidence 22334556666666666655432 233344456777
Q ss_pred eEEccCcccCCCCCCccCCcCccceEEcCCCccccccccccccccccccccccCcccccCCCccccccccccceeeccCC
Q 039720 410 YLGLVGNNIRGIIPDPIGNLTLLNVLQLGFNKLQGSIPSYLGKCQNLMQLSAPNNKLNGTLPPQIFGITTLSKLLDLSEN 489 (973)
Q Consensus 410 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N 489 (973)
.+.+..+ +..+....|.++..|+.+.+..+... .....|..+..++.+.... +
T Consensus 234 ~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~-------------------------~ 286 (394)
T 4fs7_A 234 NIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGS-------------------------V 286 (394)
T ss_dssp EEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECS-------------------------S
T ss_pred eEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCc-------------------------e
Confidence 7776543 33344456667777777777666443 4444555555554443322 2
Q ss_pred cccccCCcccccccccceeccccCcccccccccccCccchhhhcccCcccccccccchhhhccCCeecCCCCccccccCC
Q 039720 490 HLSGSIPLEVGNLKSLVQLDISRNNFSNEIPVTLSACTTLEYLLMQGNSFNGSIPQSLNALKSIKELDLSCNNLSGQIPI 569 (973)
Q Consensus 490 ~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 569 (973)
.+ ....|..+.+|+.+.+.++ ++..-..+|.++.+|+.++|.++ ++..-..+|.++.+|+.+++..| ++..-..
T Consensus 287 ~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~ 360 (394)
T 4fs7_A 287 IV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGAN 360 (394)
T ss_dssp EE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTT
T ss_pred ee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHH
Confidence 21 1235667788999988765 66566778999999999999755 77566788999999999999887 7756677
Q ss_pred CCCCCCccceEeccCC
Q 039720 570 HLGNLPFLEYLNLSYN 585 (973)
Q Consensus 570 ~~~~l~~L~~L~ls~N 585 (973)
.|.++++|+.+++..+
T Consensus 361 aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 361 AFQGCINLKKVELPKR 376 (394)
T ss_dssp TBTTCTTCCEEEEEGG
T ss_pred HhhCCCCCCEEEECCC
Confidence 8999999999999765
No 394
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.50 E-value=1.8e-14 Score=143.32 Aligned_cols=132 Identities=21% Similarity=0.296 Sum_probs=74.8
Q ss_pred CCCCCcccEEEccCCcCCCCCCCcccCCC-ccceeccCCCCccccCCccccCCCCCcEEEccCCccccCCCcccccCCCC
Q 039720 178 IGNLSALQTFDIAGNKLDGRIPDSLGQLR-NLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFKGSLPVCLGFNLPK 256 (973)
Q Consensus 178 ~~~l~~L~~L~L~~N~l~~~~p~~~~~L~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~ 256 (973)
+.++.+|++|++++|+++ .+|. +..+. +|++|++++|.+++. ..+..+++|++|+|++|+++ .+|..++..+++
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~ 89 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRIC-RIGEGLDQALPD 89 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCC-EECSCHHHHCTT
T ss_pred cCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCccc-ccCcchhhcCCC
Confidence 344555666666666665 3333 33333 666666666666543 34555555555555555555 344444335666
Q ss_pred CcEEEccCCcccccCCc--cccCCCCCCEEEccCCcccccCcc---cccCcccccceecccccC
Q 039720 257 LTVLVVAQNNLTGFLPQ--SLSNASKLEWLELNENHFSGQVRI---NFNSLPNLSKLYLGRNNL 315 (973)
Q Consensus 257 L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~~~---~~~~l~~L~~L~L~~N~l 315 (973)
|++|+|++|.|+. +|. .+..+++|++|+|++|.++..... .+..+++|+.|++++|.+
T Consensus 90 L~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 90 LTELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp CCEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCH
T ss_pred CCEEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCH
Confidence 6666666666653 343 566677777777777777643222 366666666666666654
No 395
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.49 E-value=1.3e-14 Score=144.39 Aligned_cols=133 Identities=16% Similarity=0.173 Sum_probs=87.6
Q ss_pred CCcCCCCCCEEEccCCCCCCCCCccccccC-CCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhccccc
Q 039720 81 YIGNLSFLRVINLANNSFHGQIPKEVGRLF-RLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLK 159 (973)
Q Consensus 81 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~ 159 (973)
.+.+++.|++|+|++|+++ .+|. +..+. +|++|+|++|.+++. ..++.+++|++|++++|.+.+..+..+..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 3556778888888888888 4554 55555 888888888888753 56666666666666666666544444566666
Q ss_pred cceeeccCCcccccCCC--CCCCCCcccEEEccCCcCCCCCCCc----ccCCCccceeccCCCCcc
Q 039720 160 IERLSLYGNQLTGQLPP--SIGNLSALQTFDIAGNKLDGRIPDS----LGQLRNLNYLGTSENDFS 219 (973)
Q Consensus 160 L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~----~~~L~~L~~L~Ls~N~l~ 219 (973)
|++|+|++|+++ .+|. .++.+++|++|++++|.++ .+|.. +..+++|++||+++|.+.
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 666666666664 3444 5666666666666666665 44543 666666666666666554
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.44 E-value=1.2e-13 Score=136.31 Aligned_cols=109 Identities=20% Similarity=0.208 Sum_probs=89.5
Q ss_pred ceeeccCCcccccCCcccccccccceeccccCcccccccccccCccchhhhcccCcccccccccchhhhccCCeecCCCC
Q 039720 482 KLLDLSENHLSGSIPLEVGNLKSLVQLDISRNNFSNEIPVTLSACTTLEYLLMQGNSFNGSIPQSLNALKSIKELDLSCN 561 (973)
Q Consensus 482 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 561 (973)
+.+++++|+++ .+|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 36778888887 4666553 78888899999998877888888889999999999998777777788999999999999
Q ss_pred ccccccCCCCCCCCccceEeccCCcCcCcCCC
Q 039720 562 NLSGQIPIHLGNLPFLEYLNLSYNHFEGKVPK 593 (973)
Q Consensus 562 ~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 593 (973)
+|++..|..|..+++|++|+|++|++++..+.
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~ 120 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACSD 120 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBGG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCchh
Confidence 99876666788899999999999998877653
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.41 E-value=2.3e-13 Score=134.74 Aligned_cols=108 Identities=19% Similarity=0.256 Sum_probs=88.8
Q ss_pred ceeeccCCcccccCCcccccccccceeccccCcccccccccccCccchhhhcccCcccccccccchhhhccCCeecCCCC
Q 039720 482 KLLDLSENHLSGSIPLEVGNLKSLVQLDISRNNFSNEIPVTLSACTTLEYLLMQGNSFNGSIPQSLNALKSIKELDLSCN 561 (973)
Q Consensus 482 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 561 (973)
+.+++++|+++ .+|..+. ++|+.|+|++|++++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 46788888886 5676654 78889999999998888888888999999999999998666666788999999999999
Q ss_pred ccccccCCCCCCCCccceEeccCCcCcCcCC
Q 039720 562 NLSGQIPIHLGNLPFLEYLNLSYNHFEGKVP 592 (973)
Q Consensus 562 ~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 592 (973)
+|++..+..|..+++|+.|+|++|++....+
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 9986555568889999999999998886654
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.39 E-value=1.3e-12 Score=128.85 Aligned_cols=105 Identities=22% Similarity=0.268 Sum_probs=50.1
Q ss_pred cEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccCCccccCCCcccccCCCCCcEEEccC
Q 039720 185 QTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQ 264 (973)
Q Consensus 185 ~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~ 264 (973)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|+ .+|...+.++++|++|+|++
T Consensus 12 ~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLT-VLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCCTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcC-ccChhhccCCCCCCEEECCC
Confidence 34444444444 2333332 44444444444444443444433333333333333333 33333333455555555555
Q ss_pred CcccccCCccccCCCCCCEEEccCCcccc
Q 039720 265 NNLTGFLPQSLSNASKLEWLELNENHFSG 293 (973)
Q Consensus 265 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 293 (973)
|+|++..+..|.++++|++|+|++|.++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 55555545556666666666666666553
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.37 E-value=1.9e-12 Score=128.04 Aligned_cols=104 Identities=18% Similarity=0.278 Sum_probs=50.1
Q ss_pred cEEEccCCcCCCCCCCcccCCCccceeccCCCCccccCCccccCCCCCcEEEccCCccccCCCcccccCCCCCcEEEccC
Q 039720 185 QTFDIAGNKLDGRIPDSLGQLRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQ 264 (973)
Q Consensus 185 ~~L~L~~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~ 264 (973)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|+ .+|...+.++++|++|+|++
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLT-AIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCC-ccChhHhCCcchhhEEECCC
Confidence 34455555443 3444332 44455555555554444444444444444444444443 33333333455555555555
Q ss_pred CcccccCCccccCCCCCCEEEccCCccc
Q 039720 265 NNLTGFLPQSLSNASKLEWLELNENHFS 292 (973)
Q Consensus 265 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 292 (973)
|+|++..+..|.++++|++|+|++|.+.
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcc
Confidence 5555444444555666666666666555
No 400
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.24 E-value=4.1e-12 Score=141.22 Aligned_cols=131 Identities=19% Similarity=0.194 Sum_probs=103.4
Q ss_pred eeeccCC-cccccCCcccccccccceecccc-CcccccccccccCccchhhhcccCcccccccccchhhhccCCeecCCC
Q 039720 483 LLDLSEN-HLSGSIPLEVGNLKSLVQLDISR-NNFSNEIPVTLSACTTLEYLLMQGNSFNGSIPQSLNALKSIKELDLSC 560 (973)
Q Consensus 483 ~L~Ls~N-~l~~~~p~~~~~l~~L~~L~ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 560 (973)
.++++++ +|+ .+|. +..+++|+.|+|++ |+|++..|..|.++++|+.|+|++|+|++..|..|..|++|+.|||++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 5788888 888 4787 99999999999996 999988888999999999999999999998888999999999999999
Q ss_pred CccccccCCCCCCCCccceEeccCCcCcCcCCCC--CCCCCccccccccCccccCCCC
Q 039720 561 NNLSGQIPIHLGNLPFLEYLNLSYNHFEGKVPKK--GVFSNETRISLTGNEQFCGGLG 616 (973)
Q Consensus 561 N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~--~~~~~~~~l~~~~N~~~cg~~~ 616 (973)
|+|++..|..+..++ |+.|+|++|+|....... ..+.......+..+...|..+.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 999965555666666 999999999998654321 0111122334455667777655
No 401
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.19 E-value=1.4e-11 Score=136.98 Aligned_cols=109 Identities=21% Similarity=0.227 Sum_probs=97.8
Q ss_pred ceeccccC-cccccccccccCccchhhhcccC-cccccccccchhhhccCCeecCCCCccccccCCCCCCCCccceEecc
Q 039720 506 VQLDISRN-NFSNEIPVTLSACTTLEYLLMQG-NSFNGSIPQSLNALKSIKELDLSCNNLSGQIPIHLGNLPFLEYLNLS 583 (973)
Q Consensus 506 ~~L~ls~N-~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls 583 (973)
..++++++ +|+ .+|. +..+++|+.|+|++ |+|++..+..|..|++|+.|+|++|+|++..|..|.+|++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35789998 898 5888 99999999999996 99998888899999999999999999999889999999999999999
Q ss_pred CCcCcCcCCCCCCCCCccccccccCccccCCCC
Q 039720 584 YNHFEGKVPKKGVFSNETRISLTGNEQFCGGLG 616 (973)
Q Consensus 584 ~N~l~~~~p~~~~~~~~~~l~~~~N~~~cg~~~ 616 (973)
+|+|++.++.......++.+++.+|++.|+|..
T Consensus 89 ~N~l~~~~~~~~~~~~L~~l~l~~N~~~c~c~l 121 (347)
T 2ifg_A 89 FNALESLSWKTVQGLSLQELVLSGNPLHCSCAL 121 (347)
T ss_dssp SSCCSCCCSTTTCSCCCCEEECCSSCCCCCGGG
T ss_pred CCccceeCHHHcccCCceEEEeeCCCccCCCcc
Confidence 999999888764444499999999999998753
No 402
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.19 E-value=3.6e-10 Score=127.73 Aligned_cols=133 Identities=11% Similarity=0.079 Sum_probs=66.7
Q ss_pred chhhhhcccc-ccceeeccCCcccccCCCCCCCCCcccEEEccCCc---CCCCCCCcccCCCccceeccCCCCccccCCc
Q 039720 149 EIQAIIGNWL-KIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNK---LDGRIPDSLGQLRNLNYLGTSENDFSGMFPL 224 (973)
Q Consensus 149 ~~~~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~---l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~ 224 (973)
....+|.+.. .|+.+.+..+ ++..-...|.++++|+.+.+..|. ++..-..+|.++.+|+.+.+..+ ++.+...
T Consensus 54 Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~ 131 (394)
T 4gt6_A 54 IGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSE 131 (394)
T ss_dssp ECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTT
T ss_pred cCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhh
Confidence 3344555553 4666666543 454445667777777777776653 44333455666666666655443 3334444
Q ss_pred cccCCCCCcEEEccCCccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcc
Q 039720 225 SVCNISSLDEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELN 287 (973)
Q Consensus 225 ~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 287 (973)
+|.++.+|+.+.+..+. . .++...|.+..+|+.+.+.++ ++.+...+|.+ .+|+.+.+.
T Consensus 132 aF~~c~~L~~i~lp~~~-~-~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip 190 (394)
T 4gt6_A 132 AFHHCEELDTVTIPEGV-T-SVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIP 190 (394)
T ss_dssp TTTTCTTCCEEECCTTC-C-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEEC
T ss_pred hhhhhccccccccccee-e-eecccceecccccccccccce-eeEeccccccc-cceeEEEEC
Confidence 55555555555554322 1 344444444555555555433 22233333332 344444444
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.18 E-value=5e-13 Score=149.21 Aligned_cols=164 Identities=17% Similarity=0.202 Sum_probs=95.9
Q ss_pred CCCCCeEEccCcccCCCCCCccCCc-----CccceEEcCCCccccccccccc-cccccccccccCcccccCCCccccccc
Q 039720 405 LRNLQYLGLVGNNIRGIIPDPIGNL-----TLLNVLQLGFNKLQGSIPSYLG-KCQNLMQLSAPNNKLNGTLPPQIFGIT 478 (973)
Q Consensus 405 l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~~~~~~ 478 (973)
+++|+.|+|++|.|+......+..+ ++|++|+|++|.++......+. .+++|+.|+|++|.+...-...+.
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~--- 147 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLR--- 147 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHH---
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHH---
Confidence 4678888888888875433333322 6788888888887644333332 345666666666666421111111
Q ss_pred cccceeeccCCcccccCCccc-ccccccceeccccCccccc----ccccccCccchhhhcccCcccccc----cccchhh
Q 039720 479 TLSKLLDLSENHLSGSIPLEV-GNLKSLVQLDISRNNFSNE----IPVTLSACTTLEYLLMQGNSFNGS----IPQSLNA 549 (973)
Q Consensus 479 ~l~~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~ 549 (973)
..+ ...++|+.|+|++|.++.. ++..+..+++|++|+|++|+|+.. ++..+..
T Consensus 148 ------------------~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~ 209 (372)
T 3un9_A 148 ------------------DLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDR 209 (372)
T ss_dssp ------------------HHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGG
T ss_pred ------------------HHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhc
Confidence 011 1234566667777766532 333445566677777777776642 2445556
Q ss_pred hccCCeecCCCCcccc----ccCCCCCCCCccceEeccCCcCcC
Q 039720 550 LKSIKELDLSCNNLSG----QIPIHLGNLPFLEYLNLSYNHFEG 589 (973)
Q Consensus 550 l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~ls~N~l~~ 589 (973)
.++|++|||++|.|+. .++..+...++|++|+|++|+++.
T Consensus 210 ~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 210 NRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp CSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred CCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 6677777777777764 233344455777777777777653
No 404
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.18 E-value=5.8e-10 Score=126.03 Aligned_cols=157 Identities=10% Similarity=0.052 Sum_probs=96.8
Q ss_pred ccccC-CCccceEecccccccchhhhhccccccceeeccCCc---ccccCCCCCCCCCcccEEEccCCcCCCCCCCcccC
Q 039720 129 NLSRC-FNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLYGNQ---LTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQ 204 (973)
Q Consensus 129 ~~~~l-~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~---l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 204 (973)
.|.++ ..|+.+.+..+ ++.....+|.++.+|+.+.+..|. ++..-...|.++.+|+.+.+..+ ++.....+|.+
T Consensus 58 aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~ 135 (394)
T 4gt6_A 58 VFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHH 135 (394)
T ss_dssp TTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTT
T ss_pred hccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhh
Confidence 34455 34667766543 555566677777777777777653 54444556777777777766554 44344556777
Q ss_pred CCccceeccCCCCccccCCccccCCCCCcEEEccCCccccCCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEE
Q 039720 205 LRNLNYLGTSENDFSGMFPLSVCNISSLDEAYLFKNRFKGSLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWL 284 (973)
Q Consensus 205 L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 284 (973)
+.+|+.+.+..+ +..+...+|..+.+|+.+.+..+ ++ .|....|. -.+|+.+.+..+-.. ....+|.++.+|+..
T Consensus 136 c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~-~I~~~aF~-~~~l~~i~ip~~~~~-i~~~af~~c~~l~~~ 210 (394)
T 4gt6_A 136 CEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VT-AIEERAFT-GTALTQIHIPAKVTR-IGTNAFSECFALSTI 210 (394)
T ss_dssp CTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTT-TCCCSEEEECTTCCE-ECTTTTTTCTTCCEE
T ss_pred hcccccccccce-eeeecccceecccccccccccce-ee-Eecccccc-ccceeEEEECCcccc-cccchhhhcccccee
Confidence 777777777644 33355566777777777777654 33 45555553 456777777655333 455666677777766
Q ss_pred EccCCccc
Q 039720 285 ELNENHFS 292 (973)
Q Consensus 285 ~Ls~N~l~ 292 (973)
....+...
T Consensus 211 ~~~~~~~~ 218 (394)
T 4gt6_A 211 TSDSESYP 218 (394)
T ss_dssp EECCSSSC
T ss_pred cccccccc
Confidence 66555443
No 405
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.18 E-value=3.6e-13 Score=150.33 Aligned_cols=38 Identities=13% Similarity=0.263 Sum_probs=22.1
Q ss_pred CcccEEEccCCcCCCCCCCcccCC-----CccceeccCCCCcc
Q 039720 182 SALQTFDIAGNKLDGRIPDSLGQL-----RNLNYLGTSENDFS 219 (973)
Q Consensus 182 ~~L~~L~L~~N~l~~~~p~~~~~L-----~~L~~L~Ls~N~l~ 219 (973)
+.|++|+|++|.++......+... ++|++|+|++|.++
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~ 114 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLD 114 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCC
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCC
Confidence 467777777777763333333222 56666666666664
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.13 E-value=2.9e-10 Score=120.84 Aligned_cols=145 Identities=17% Similarity=0.154 Sum_probs=112.0
Q ss_pred HHhhcCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcC-CCCceeEEeEeeecccCCCc
Q 039720 671 KATKEFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIR-HRNLIKIITICSSIDFKGAD 749 (973)
Q Consensus 671 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~ 749 (973)
.....|++....+.|+.+.||++.. .+..+++|+...........+.+|+.+++.+. +..+.++++++.. ..
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~--~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~-----~~ 83 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERH-----DG 83 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEEC--SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEE-----TT
T ss_pred HHhccceeEeeccCCCCCeEEEEEC--CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEec-----CC
Confidence 3445788888899999999999986 47899999987532223346888999999885 5667788887643 36
Q ss_pred eEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcC---------------------------------
Q 039720 750 FKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHC--------------------------------- 796 (973)
Q Consensus 750 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--------------------------------- 796 (973)
..++||||++|.++.+... .......++.++++++..||+..
T Consensus 84 ~~~lv~e~i~G~~l~~~~~-----~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (263)
T 3tm0_A 84 WSNLLMSEADGVLCSEEYE-----DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENW 158 (263)
T ss_dssp EEEEEEECCSSEEHHHHCC-----TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGG
T ss_pred ceEEEEEecCCeehhhccC-----CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccc
Confidence 7899999999999987632 12234578899999999999810
Q ss_pred -----------------------CCCeEecCCCCCcEEecCCCcEEEeccccch
Q 039720 797 -----------------------QPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 827 (973)
Q Consensus 797 -----------------------~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~ 827 (973)
.+.++|+|+++.||+++.+..+.|+||+.+.
T Consensus 159 ~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 159 EEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp STTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1359999999999999876566799999874
No 407
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.87 E-value=3.2e-09 Score=112.45 Aligned_cols=136 Identities=14% Similarity=0.112 Sum_probs=96.9
Q ss_pred cCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCC--ceeEEeEeeecccCCCceEE
Q 039720 675 EFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRN--LIKIITICSSIDFKGADFKA 752 (973)
Q Consensus 675 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~~~~~~~~~~ 752 (973)
.|.+....+.|..+.||++.. .+|..+++|+.... ....+..|+.+++.+.+.+ +.+++++... ....+
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~-----~~~~~ 91 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTE-----AGRDW 91 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEEC-----SSCEE
T ss_pred CCceEecccCCCCceEEEEec-CCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccC-----CCCCE
Confidence 444443344666799999975 46788999997643 2345778999998886544 4457776432 35689
Q ss_pred EEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcC------------------------------------
Q 039720 753 IVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHC------------------------------------ 796 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~------------------------------------ 796 (973)
+||||++|.++. ... .....++.++++++..||+..
T Consensus 92 ~v~e~i~G~~l~--~~~------~~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (264)
T 1nd4_A 92 LLLGEVPGQDLL--SSH------LAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ 163 (264)
T ss_dssp EEEECCSSEETT--TSC------CCHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGT
T ss_pred EEEEecCCcccC--cCc------CCHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhcc
Confidence 999999998874 211 123467788888888888751
Q ss_pred -------------------CCCeEecCCCCCcEEecCCCcEEEeccccch
Q 039720 797 -------------------QPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 827 (973)
Q Consensus 797 -------------------~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~ 827 (973)
...++|+|++|.||+++.++.+.++||+.+.
T Consensus 164 ~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 164 GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp TCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred CccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1139999999999999877667799999875
No 408
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.86 E-value=6.3e-08 Score=108.66 Aligned_cols=134 Identities=11% Similarity=0.144 Sum_probs=62.0
Q ss_pred CccccCCCCCCeEEccCcccCCCCCCccCCcCccceEEcCCCccccccccccccccccccccccCcccccCCCccccccc
Q 039720 399 PPAIGELRNLQYLGLVGNNIRGIIPDPIGNLTLLNVLQLGFNKLQGSIPSYLGKCQNLMQLSAPNNKLNGTLPPQIFGIT 478 (973)
Q Consensus 399 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~ 478 (973)
...+....+|+.+.+..+ +..+....|.++..|+.+.+..+ ++.....+|..+.+|+.+.+..+ +. .
T Consensus 210 ~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~-~--------- 276 (379)
T 4h09_A 210 AYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VK-T--------- 276 (379)
T ss_dssp TTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CS-E---------
T ss_pred ecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ce-e---------
Confidence 344445555555555433 23233444555555555555443 33233344444444544443221 11 1
Q ss_pred cccceeeccCCcccccCCcccccccccceeccccCcccccccccccCccchhhhcccCcccccccccchhhhccCCeecC
Q 039720 479 TLSKLLDLSENHLSGSIPLEVGNLKSLVQLDISRNNFSNEIPVTLSACTTLEYLLMQGNSFNGSIPQSLNALKSIKELDL 558 (973)
Q Consensus 479 ~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 558 (973)
.....|.++.+|+.+++.++.++..-..+|.++.+|+.+.|..+ ++..-..+|.++.+|+.+.+
T Consensus 277 ---------------i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~i 340 (379)
T 4h09_A 277 ---------------VPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISY 340 (379)
T ss_dssp ---------------ECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCC
T ss_pred ---------------ccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEE
Confidence 11223444555555555555554333445555555555555433 44333445555555665555
Q ss_pred CCC
Q 039720 559 SCN 561 (973)
Q Consensus 559 s~N 561 (973)
..+
T Consensus 341 p~~ 343 (379)
T 4h09_A 341 PKS 343 (379)
T ss_dssp CTT
T ss_pred CCc
Confidence 443
No 409
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.86 E-value=1.6e-11 Score=128.52 Aligned_cols=192 Identities=15% Similarity=0.147 Sum_probs=104.4
Q ss_pred hhhHHHHHHHHhhccCCCcCCCCCCC--------------CCCCCCceeeeEeeCCCCeEEEEEeec---cCccccccC-
Q 039720 19 SHVKHATVTFNMQQLHDPLGVTKSWN--------------NSINLCQWTGVTCGHRHQRVTKLDLES---QNIGGFLSP- 80 (973)
Q Consensus 19 ~~~~~~ll~~~~~~~~d~~~~l~sw~--------------~~~~~c~w~gv~C~~~~~~v~~l~l~~---~~l~g~~~~- 80 (973)
--+++-|++|-.+...-|.. .-.|. .+...|.|.|+.|+....+|..+..++ ..+.|.+++
T Consensus 34 ky~k~~ll~~i~~~~~~~f~-p~~~~~~~~~~~ffV~~~~~A~~l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~ 112 (267)
T 3rw6_A 34 KYDKAWLLSMIQSKCSVPFT-PIEFHYENTRAQFFVEDASTASALKAVNYKILDRENRRISIIINSSAPPHTILNELKPE 112 (267)
T ss_dssp GSCHHHHHHHHHHTCSSCCC-CEEEEEETTEEEEEESCHHHHHHHHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHH
T ss_pred ccCHHHHHHHHHHhCCCCcE-eEEEEEeCCEEEEEeCChHHHHHHHhcCcEEECCCCCEEEEEEecCCCcccccccCCHH
Confidence 44577777776655433321 11232 112358999999997766777766655 334444432
Q ss_pred CCcCCCCCCEEEccCCCCCCCCCc-cccccCCCCE--EeeecccCCCCCCcccccCCCccceEecccccccchhhhhccc
Q 039720 81 YIGNLSFLRVINLANNSFHGQIPK-EVGRLFRLET--IVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNW 157 (973)
Q Consensus 81 ~l~~l~~L~~L~L~~n~l~~~~p~-~~~~l~~L~~--L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l 157 (973)
.+..++. .|....|..++.++- .|...+.|+. ++++.|... .+.+.++-...++
T Consensus 113 ~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~~---------------------~~~~~l~i~~~~l 169 (267)
T 3rw6_A 113 QVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRS---------------------CMAATLRIIEENI 169 (267)
T ss_dssp HHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSHH---------------------HHHHHHHHHHHHC
T ss_pred HHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCHHH---------------------HHHHHHHHHHhhC
Confidence 1222221 122222222222111 1233333333 333433221 1112222233566
Q ss_pred cccceeeccCCcccc--cCCCCCCCCCcccEEEccCCcCCCCCCCcccCCC--ccceeccCCCCccccCCc-------cc
Q 039720 158 LKIERLSLYGNQLTG--QLPPSIGNLSALQTFDIAGNKLDGRIPDSLGQLR--NLNYLGTSENDFSGMFPL-------SV 226 (973)
Q Consensus 158 ~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~--~L~~L~Ls~N~l~~~~p~-------~~ 226 (973)
++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+.+|. .+
T Consensus 170 ~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il 247 (267)
T 3rw6_A 170 PELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIR 247 (267)
T ss_dssp TTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHH
T ss_pred CCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHHH
Confidence 778888888888876 4556666788888888888888754 3344444 788888888888766552 35
Q ss_pred cCCCCCcEEE
Q 039720 227 CNISSLDEAY 236 (973)
Q Consensus 227 ~~l~~L~~L~ 236 (973)
..+++|+.|+
T Consensus 248 ~~~P~L~~LD 257 (267)
T 3rw6_A 248 ERFPKLLRLD 257 (267)
T ss_dssp HHCTTCCEES
T ss_pred HHCcccCeEC
Confidence 6677777664
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.85 E-value=5.7e-10 Score=123.29 Aligned_cols=206 Identities=11% Similarity=0.138 Sum_probs=115.3
Q ss_pred CeEEEEEeeccCccc-c-------ccCCCcCCCCCCEEEccCCCCC---------CCCCccccccCCCCEEeeecccCCC
Q 039720 62 QRVTKLDLESQNIGG-F-------LSPYIGNLSFLRVINLANNSFH---------GQIPKEVGRLFRLETIVLSNNSFSG 124 (973)
Q Consensus 62 ~~v~~l~l~~~~l~g-~-------~~~~l~~l~~L~~L~L~~n~l~---------~~~p~~~~~l~~L~~L~Ls~n~l~~ 124 (973)
.+|+.|.+......| . +..++..+++|+.|.+.++.+. +.++..+..+++|+.|+|++|.-.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l- 185 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL- 185 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-
Confidence 357777776555542 2 2345667899999999776432 234455677889999999887322
Q ss_pred CCCcccccCCCccceEecccccccchhhhhc--cccccceeeccC--CcccccCCCCCCCCCcccEEEccCCcCCCCCCC
Q 039720 125 KIPTNLSRCFNLIDFWVHTNNLVGEIQAIIG--NWLKIERLSLYG--NQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPD 200 (973)
Q Consensus 125 ~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~--~l~~L~~L~L~~--n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 200 (973)
.+|. + .+++|++|++..|.+.......+. .+++|++|+|+. |...+.. .+..+..+ +.
T Consensus 186 ~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~--~~~~l~~~---------l~----- 247 (362)
T 2ra8_A 186 SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDG--DMNVFRPL---------FS----- 247 (362)
T ss_dssp BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCS--CGGGTGGG---------SC-----
T ss_pred eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccch--hHHHHHHH---------Hh-----
Confidence 3444 3 378888888888887665555554 677888888753 2211100 00000000 00
Q ss_pred cccCCCccceeccCCCCccccCCccc---cCCCCCcEEEccCCccccC----CCcccccCCCCCcEEEccCCcccccCCc
Q 039720 201 SLGQLRNLNYLGTSENDFSGMFPLSV---CNISSLDEAYLFKNRFKGS----LPVCLGFNLPKLTVLVVAQNNLTGFLPQ 273 (973)
Q Consensus 201 ~~~~L~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~L~~N~l~~~----ip~~~~~~l~~L~~L~Ls~N~l~~~~p~ 273 (973)
...+++|++|+|++|.+.+..+..+ ..+++|++|+|+.|.+.+. ++..+. .+++|+.|+|++|.|+...-.
T Consensus 248 -~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~-~l~~L~~L~L~~n~i~d~~~~ 325 (362)
T 2ra8_A 248 -KDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVD-KIKHLKFINMKYNYLSDEMKK 325 (362)
T ss_dssp -TTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHH-HHTTCSEEECCSBBCCHHHHH
T ss_pred -cCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcc-cCCcceEEECCCCcCCHHHHH
Confidence 0124455555555555442221111 1345556666665555532 222211 467888888888887754333
Q ss_pred cccC-CCCCCEEEccCCc
Q 039720 274 SLSN-ASKLEWLELNENH 290 (973)
Q Consensus 274 ~~~~-l~~L~~L~Ls~N~ 290 (973)
.+.. + ...++++.|+
T Consensus 326 ~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 326 ELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHHHHC--CSEEECCSBC
T ss_pred HHHHHc--CCEEEecCCc
Confidence 4443 2 4668888887
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.84 E-value=7.3e-10 Score=122.40 Aligned_cols=215 Identities=13% Similarity=0.215 Sum_probs=118.4
Q ss_pred CCCCCEEEccCCCCCC-CC-------CccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchhhhhcc
Q 039720 85 LSFLRVINLANNSFHG-QI-------PKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGN 156 (973)
Q Consensus 85 l~~L~~L~L~~n~l~~-~~-------p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~ 156 (973)
++.++.|.+....+.| .. ..++.++++|+.|.+..+..... .++ ++. .+.+...+..
T Consensus 106 ~~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~---~is--------~~~----~~~L~~ll~~ 170 (362)
T 2ra8_A 106 LPSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQ---EIS--------WIE----QVDLSPVLDA 170 (362)
T ss_dssp GGGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTC---CGG--------GCB----CCBCHHHHHT
T ss_pred chhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhc---ccc--------ccc----ccCHHHHHhc
Confidence 3467888888766553 21 33456788888888866432110 010 000 1235566677
Q ss_pred ccccceeeccCCcccccCCCCCCCCCcccEEEccCCcCCCCCCCccc--CCCccceeccCC--CCccccCCccccCCCCC
Q 039720 157 WLKIERLSLYGNQLTGQLPPSIGNLSALQTFDIAGNKLDGRIPDSLG--QLRNLNYLGTSE--NDFSGMFPLSVCNISSL 232 (973)
Q Consensus 157 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~--~L~~L~~L~Ls~--N~l~~~~p~~~~~l~~L 232 (973)
+++|+.|+|++|.-. .++. +. +++|++|+|..|.+.......+. .+++|++|+|+. |...+.. .+ ..
T Consensus 171 ~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~--~~---~~- 241 (362)
T 2ra8_A 171 MPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDG--DM---NV- 241 (362)
T ss_dssp CTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCS--CG---GG-
T ss_pred CCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccch--hH---HH-
Confidence 788888888887311 2333 43 77888888888876532222333 678888887753 2111100 00 00
Q ss_pred cEEEccCCccccCCCcccc-cCCCCCcEEEccCCcccccCCcccc---CCCCCCEEEccCCcccccC----cccccCccc
Q 039720 233 DEAYLFKNRFKGSLPVCLG-FNLPKLTVLVVAQNNLTGFLPQSLS---NASKLEWLELNENHFSGQV----RINFNSLPN 304 (973)
Q Consensus 233 ~~L~L~~N~l~~~ip~~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~ 304 (973)
+...+. ..+++|++|+|++|.+++..+..+. .+++|++|+|+.|.|++.. +..+..+++
T Consensus 242 -------------l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~ 308 (362)
T 2ra8_A 242 -------------FRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKH 308 (362)
T ss_dssp -------------TGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTT
T ss_pred -------------HHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCc
Confidence 000000 1356777777777776643333332 4667788888777777532 223345677
Q ss_pred ccceecccccCCCCCCCChhhhhhhcc-cccceeecccccc
Q 039720 305 LSKLYLGRNNLGTRTSTDLDFITLLTN-CSKLVKLGLVFNR 344 (973)
Q Consensus 305 L~~L~L~~N~l~~~~~~~~~~~~~l~~-l~~L~~L~l~~N~ 344 (973)
|+.|+|++|.|+. .....+.. + ..+++++.++
T Consensus 309 L~~L~L~~n~i~d------~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 309 LKFINMKYNYLSD------EMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp CSEEECCSBBCCH------HHHHHHHHHC--CSEEECCSBC
T ss_pred ceEEECCCCcCCH------HHHHHHHHHc--CCEEEecCCc
Confidence 8888888777653 11222222 1 3556777665
No 412
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.81 E-value=1.4e-07 Score=105.84 Aligned_cols=152 Identities=11% Similarity=0.082 Sum_probs=100.5
Q ss_pred CCCCCCeEEccCcccCCCCCCccCCcCccceEEcCCCccccccccccccccccccccccCcccccCCCccccccccccce
Q 039720 404 ELRNLQYLGLVGNNIRGIIPDPIGNLTLLNVLQLGFNKLQGSIPSYLGKCQNLMQLSAPNNKLNGTLPPQIFGITTLSKL 483 (973)
Q Consensus 404 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~ 483 (973)
....+..+.+..+.- ......+....+|+.+.+..+ ++.....++..+.+|+.+.+..
T Consensus 192 ~~~~~~~~~~~~~~~-~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~-------------------- 249 (379)
T 4h09_A 192 AAKTGTEFTIPSTVK-TVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPK-------------------- 249 (379)
T ss_dssp TTCCCSEEECCTTCC-EECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECT--------------------
T ss_pred cccccccccccccee-EEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCC--------------------
Confidence 334444444433222 233445555666666666544 2223344455555555544332
Q ss_pred eeccCCcccccCCcccccccccceeccccCcccccccccccCccchhhhcccCcccccccccchhhhccCCeecCCCCcc
Q 039720 484 LDLSENHLSGSIPLEVGNLKSLVQLDISRNNFSNEIPVTLSACTTLEYLLMQGNSFNGSIPQSLNALKSIKELDLSCNNL 563 (973)
Q Consensus 484 L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 563 (973)
+ ++..-...|.++.+|+.+.+..+ ++......|.++.+|+.+.+.++.++.....+|.++.+|+.++|..+ +
T Consensus 250 -----~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l 321 (379)
T 4h09_A 250 -----N-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-L 321 (379)
T ss_dssp -----T-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-C
T ss_pred -----C-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-c
Confidence 2 23233456777888888888755 65455678999999999999999998666788999999999999865 6
Q ss_pred ccccCCCCCCCCccceEeccCC
Q 039720 564 SGQIPIHLGNLPFLEYLNLSYN 585 (973)
Q Consensus 564 ~~~~p~~~~~l~~L~~L~ls~N 585 (973)
+..-...|.++++|+.+.+..+
T Consensus 322 ~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 322 KTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp CEECTTTTTTCTTCCCCCCCTT
T ss_pred cEEHHHHhhCCCCCCEEEECCc
Confidence 6455678999999999988654
No 413
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.73 E-value=2.4e-08 Score=111.26 Aligned_cols=145 Identities=17% Similarity=0.184 Sum_probs=103.7
Q ss_pred cCCccccccceeEEEEEECCCCcEEEEEEee--cccc-hhHHHHHHHHHHHHhcC--CCCceeEEeEeeecccCCCceEE
Q 039720 678 SSNRIGKGSFGFVYKGNLGEDGMSVAVKVMN--LDKK-GATKSFVAECEALRNIR--HRNLIKIITICSSIDFKGADFKA 752 (973)
Q Consensus 678 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~--~~~~-~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~~~~~~ 752 (973)
..+.++.|.++.||+++. .+..+++|+.. .... .....+.+|+.+++.+. +..+.+++.++.+. ......+
T Consensus 42 ~~~~l~~G~sn~~y~v~~--~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~--~~~g~~~ 117 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVT--PGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDE--SVIGRAF 117 (359)
T ss_dssp EEEECCC-CCSCEEEEEC--SSCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCT--TTTSSCE
T ss_pred eEEEcCCcccceEEEEEE--CCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCC--CccCCeE
Confidence 356789999999999987 45688889875 3221 12356788999999987 44577888876542 1124578
Q ss_pred EEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcC------------------------------------
Q 039720 753 IVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHC------------------------------------ 796 (973)
Q Consensus 753 lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~------------------------------------ 796 (973)
+||||++|..+.+... ......+...++.+++.+|..||+..
T Consensus 118 ~vme~v~G~~l~~~~~--~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 118 YIMEFVSGRVLWDQSL--PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp EEEECCCCBCCCCTTC--TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred EEEEecCCeecCCCcc--ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 9999999987754211 22345667788999999999999731
Q ss_pred -------------------CCCeEecCCCCCcEEecCCCc--EEEeccccchh
Q 039720 797 -------------------QPPIVHGDLKPSNVLLDHDMV--AHVSDFGLARF 828 (973)
Q Consensus 797 -------------------~~~ivHrDik~~NILl~~~~~--~kl~Dfg~a~~ 828 (973)
.+.++|||+++.||+++.++. +.++||+.+..
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247999999999999997753 68999998863
No 414
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.65 E-value=1.7e-08 Score=109.52 Aligned_cols=196 Identities=14% Similarity=0.143 Sum_probs=119.7
Q ss_pred CCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcC-CCC--ceeEEeEeeecccCCCceEEEEE
Q 039720 679 SNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIR-HRN--LIKIITICSSIDFKGADFKAIVY 755 (973)
Q Consensus 679 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~n--iv~~~~~~~~~~~~~~~~~~lv~ 755 (973)
.+.++.|.+..||++. ..+++|+.... .....+.+|..+++.+. +.. +.+++..... ...-...|+||
T Consensus 25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~--~~~~~~~~~vm 95 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN-----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMP--SETYQMSFAGF 95 (304)
T ss_dssp CCEEEECSSEEEEEST-----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCC--CSSCSCSCEEE
T ss_pred eEecCCCCcceEEEEC-----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCC--CCCCCcceEEE
Confidence 4568999999999863 46888986422 34567889999998884 332 3344443221 11112457899
Q ss_pred eeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcC---------------------------------------
Q 039720 756 EYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHC--------------------------------------- 796 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--------------------------------------- 796 (973)
++++|.++.+... ...+..++..++.+++..+..||+..
T Consensus 96 ~~i~G~~l~~~~~--~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 173 (304)
T 3sg8_A 96 TKIKGVPLTPLLL--NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKV 173 (304)
T ss_dssp ECCCCEECCHHHH--HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred cccCCeECCcccc--ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHH
Confidence 9999988765332 22345566778888888888888610
Q ss_pred ----------------CCCeEecCCCCCcEEecC--CCcEEEeccccchhccCCCCccCCC------CCccccccccccc
Q 039720 797 ----------------QPPIVHGDLKPSNVLLDH--DMVAHVSDFGLARFLSHHPFLVAPE------GQSSSIEMKGTIG 852 (973)
Q Consensus 797 ----------------~~~ivHrDik~~NILl~~--~~~~kl~Dfg~a~~~~~~~~~~~~~------~~~~~~~~~gt~~ 852 (973)
.+.++|+|+++.||+++. ...+.++||+.+..-.......... ...........++
T Consensus 174 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~ 253 (304)
T 3sg8_A 174 DDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYK 253 (304)
T ss_dssp HHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHT
T ss_pred HHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcC
Confidence 135899999999999998 4567899999886432210000000 0000000111111
Q ss_pred ccC-cccccCCCCCcccchHHHHHHHHHHHhCCCCC
Q 039720 853 YIG-PEYGMGGDLSMTGDVYSFGILLLEMFTRRRPT 887 (973)
Q Consensus 853 y~a-PE~~~~~~~~~~sDvwSlG~ll~elltg~~Pf 887 (973)
+.. |+..... ....+.|++|.++|.+.+|+.+|
T Consensus 254 ~~~~~~~~~r~--~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 254 HKDIPTVLEKY--RMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp CSCHHHHHHHH--HHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCCcHHHHHHH--HHHHHHHHHHHHHHHHHcCCHHH
Confidence 122 2221111 12268999999999999998875
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.34 E-value=2.6e-08 Score=99.24 Aligned_cols=123 Identities=14% Similarity=0.134 Sum_probs=77.7
Q ss_pred cccCCCcCCCCCCEEEccCC-CCCCC----CCccccccCCCCEEeeecccCCCCCCcccccCCCccceEecccccccchh
Q 039720 77 FLSPYIGNLSFLRVINLANN-SFHGQ----IPKEVGRLFRLETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQ 151 (973)
Q Consensus 77 ~~~~~l~~l~~L~~L~L~~n-~l~~~----~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~ 151 (973)
.+...+...+.|++|+|++| .+... +...+...++|++|+|++|.+...-.. .+.
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~--------------------~l~ 86 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAF--------------------ALA 86 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHH--------------------HHH
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHH--------------------HHH
Confidence 34445667788888888888 77532 334455667788888888877532111 223
Q ss_pred hhhccccccceeeccCCccccc----CCCCCCCCCcccEEEc--cCCcCCCC----CCCcccCCCccceeccCCCCcc
Q 039720 152 AIIGNWLKIERLSLYGNQLTGQ----LPPSIGNLSALQTFDI--AGNKLDGR----IPDSLGQLRNLNYLGTSENDFS 219 (973)
Q Consensus 152 ~~~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L--~~N~l~~~----~p~~~~~L~~L~~L~Ls~N~l~ 219 (973)
..+...++|++|+|++|.++.. +...+...++|++|+| ++|.|... +...+...++|++|+|++|.+.
T Consensus 87 ~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 87 EMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 3444455677777777766532 3445566677888888 77777633 2334555678888888888875
No 416
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.30 E-value=1.1e-07 Score=99.49 Aligned_cols=80 Identities=24% Similarity=0.333 Sum_probs=59.8
Q ss_pred cCCCCcCEEEcccccCCC--CCCccccCCCCCCeEEccCcccCCCCCCccCCcC--ccceEEcCCCcccccccc------
Q 039720 379 RNLFNLNGLGLEYNQLTG--TIPPAIGELRNLQYLGLVGNNIRGIIPDPIGNLT--LLNVLQLGFNKLQGSIPS------ 448 (973)
Q Consensus 379 ~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~------ 448 (973)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 567789999999999987 3457777889999999999998865 3344444 888888888888876652
Q ss_pred -cccccccccccc
Q 039720 449 -YLGKCQNLMQLS 460 (973)
Q Consensus 449 -~~~~l~~L~~L~ 460 (973)
.+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 355677776665
No 417
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.29 E-value=3.2e-06 Score=92.17 Aligned_cols=136 Identities=17% Similarity=0.170 Sum_probs=98.0
Q ss_pred cCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCC--C--CceeEEeEeeecccCCCce
Q 039720 675 EFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRH--R--NLIKIITICSSIDFKGADF 750 (973)
Q Consensus 675 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~--niv~~~~~~~~~~~~~~~~ 750 (973)
.+...+.++.|..+.||++ |..+++|+... ......+.+|..+++.+.+ . .+.+++++ ..
T Consensus 38 ~i~~v~~l~~G~~n~vy~v-----g~~~vlR~~~~--~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~---------~~ 101 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC-----NEQYVVKVPKR--DSVRISQKRELELYRFLENCKLSYQIPAVVYQ---------SD 101 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE-----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE---------CS
T ss_pred ceEEEEeCCCCCCceEEEE-----CCEEEEEeCCc--HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec---------CC
Confidence 4556678999999999998 56788898742 2234568899999988876 1 23444443 34
Q ss_pred EEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCC---------------------------------
Q 039720 751 KAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQ--------------------------------- 797 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~--------------------------------- 797 (973)
.++||||++|.++.+... ......+...++.+++..+..||+...
T Consensus 102 ~~lvme~i~G~~l~~~~~--~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (320)
T 3r70_A 102 RFNIMKYIKGERITYEQY--HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQ 179 (320)
T ss_dssp SCEEEECCCCBCCCHHHH--TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTT
T ss_pred cEEEEeecCCcccccccc--ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcc
Confidence 679999999988864321 223445566777888888888885421
Q ss_pred ---------------------------CCeEecCCCCCcEEecCCCcEEEeccccchh
Q 039720 798 ---------------------------PPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 828 (973)
Q Consensus 798 ---------------------------~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~ 828 (973)
+.++|+|++|.||+++.+..+.++||+.+..
T Consensus 180 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 180 LLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp CCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred cccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2359999999999999866679999998864
No 418
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.16 E-value=5.5e-06 Score=88.49 Aligned_cols=76 Identities=17% Similarity=0.181 Sum_probs=59.1
Q ss_pred cCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCC---CceeEEeEeeecccCCCceEEEE
Q 039720 678 SSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHR---NLIKIITICSSIDFKGADFKAIV 754 (973)
Q Consensus 678 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~lv 754 (973)
..+.++.|.++.||+++. .+|+.+++|+...........+..|++.|+.+.+. .+.+++++. ..++|
T Consensus 19 ~~~~l~gG~~n~vy~v~~-~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~---------~~~lv 88 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---------DRTLA 88 (288)
T ss_dssp EEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---------TTEEE
T ss_pred ceeeeCCcchhheEEEEe-CCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec---------CcEEE
Confidence 356799999999999987 47889999997543333346789999999999865 467777652 36899
Q ss_pred EeeccCCCH
Q 039720 755 YEYMQYGSV 763 (973)
Q Consensus 755 ~e~~~~gsL 763 (973)
|||++++++
T Consensus 89 me~l~g~~~ 97 (288)
T 3d1u_A 89 MEWVDERPP 97 (288)
T ss_dssp EECCCCCCC
T ss_pred EEecccCCC
Confidence 999998864
No 419
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.15 E-value=1.7e-07 Score=93.30 Aligned_cols=121 Identities=12% Similarity=0.089 Sum_probs=87.0
Q ss_pred CccccccCCCCEEeeecc-cCCCCCCcccccCCCccceEecccccccchhhhhccccccceeeccCCccccc----CCCC
Q 039720 103 PKEVGRLFRLETIVLSNN-SFSGKIPTNLSRCFNLIDFWVHTNNLVGEIQAIIGNWLKIERLSLYGNQLTGQ----LPPS 177 (973)
Q Consensus 103 p~~~~~l~~L~~L~Ls~n-~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~----~p~~ 177 (973)
...+...++|++|+|++| .+...-. ..+...+...++|++|+|++|.+... +...
T Consensus 29 ~~~l~~~~~L~~L~L~~n~~i~~~g~--------------------~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~ 88 (185)
T 1io0_A 29 KRIQNNDPDLEEVNLNNIMNIPVPTL--------------------KACAEALKTNTYVKKFSIVGTRSNDPVAFALAEM 88 (185)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHH--------------------HHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHH
T ss_pred HHHHhcCCCCCEEEecCCCCCCHHHH--------------------HHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHH
Confidence 344566777788888777 6652110 12345556667888888888887632 3344
Q ss_pred CCCCCcccEEEccCCcCCCC----CCCcccCCCccceecc--CCCCcccc----CCccccCCCCCcEEEccCCccc
Q 039720 178 IGNLSALQTFDIAGNKLDGR----IPDSLGQLRNLNYLGT--SENDFSGM----FPLSVCNISSLDEAYLFKNRFK 243 (973)
Q Consensus 178 ~~~l~~L~~L~L~~N~l~~~----~p~~~~~L~~L~~L~L--s~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 243 (973)
+...++|++|+|++|.|... +...+...++|++|+| ++|.|... +...+...++|++|+|++|.+.
T Consensus 89 L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 89 LKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 55568899999999999743 3566788889999999 88999754 3345566789999999999986
No 420
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.05 E-value=3.7e-05 Score=81.44 Aligned_cols=135 Identities=18% Similarity=0.142 Sum_probs=97.4
Q ss_pred ccccccce-eEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcC-CCCceeEEeEeeecccCCCceEEEEEeec
Q 039720 681 RIGKGSFG-FVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIR-HRNLIKIITICSSIDFKGADFKAIVYEYM 758 (973)
Q Consensus 681 ~lg~G~~g-~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 758 (973)
.+..|..| .||+......+..+++|+-.. .....+.+|...|+.+. +--+.+++.++.+ .+..++|||++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~-----~~~~~lvme~l 102 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRT-----PDDAWLLTTAI 102 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEE-----TTEEEEEEECC
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEE-----CCeEEEEEEee
Confidence 34556555 699988876778899998653 34556788999998875 2235667776654 36789999999
Q ss_pred cCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcC------------------------------------------
Q 039720 759 QYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHC------------------------------------------ 796 (973)
Q Consensus 759 ~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~------------------------------------------ 796 (973)
+|.++.+..... ......++.+++..+..||...
T Consensus 103 ~G~~~~~~~~~~----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (272)
T 4gkh_A 103 PGKTAFQVLEEY----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQ 178 (272)
T ss_dssp CSEEHHHHHHHC----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHH
T ss_pred CCccccccccCC----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHH
Confidence 998887765432 2234456777777777777531
Q ss_pred -------------CCCeEecCCCCCcEEecCCCcEEEeccccch
Q 039720 797 -------------QPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 827 (973)
Q Consensus 797 -------------~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~ 827 (973)
.+.++|+|+.+.||+++.++.+-|+||+.+.
T Consensus 179 ~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 179 VWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1137999999999999987777799999875
No 421
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=97.98 E-value=2.4e-05 Score=84.52 Aligned_cols=136 Identities=16% Similarity=0.191 Sum_probs=91.4
Q ss_pred CCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCC---CceeEEeEeeecccCCCceEEEEE
Q 039720 679 SNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHR---NLIKIITICSSIDFKGADFKAIVY 755 (973)
Q Consensus 679 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~lv~ 755 (973)
.+.++.|....||+. |..+++|+.. .......+..|.++++.+.+. .+.+++.++.. .....++||
T Consensus 24 v~~l~~G~~n~v~~v-----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~----~~g~~~~v~ 92 (306)
T 3tdw_A 24 VESLGEGFRNYAILV-----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKR----SDGNPFVGY 92 (306)
T ss_dssp EEEEEECSSEEEEEE-----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEEC----TTSCEEEEE
T ss_pred eeecCCCcceeEEEE-----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeeccc----CCCceEEEE
Confidence 346788888999988 4678888853 233456789999999999753 24555555431 235578999
Q ss_pred eeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhc----------------------------------------
Q 039720 756 EYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNH---------------------------------------- 795 (973)
Q Consensus 756 e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---------------------------------------- 795 (973)
||++|.++.+..- ......+...++.+++..+..||+.
T Consensus 93 e~i~G~~l~~~~~--~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~ 170 (306)
T 3tdw_A 93 RKVQGQILGEDGM--AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRD 170 (306)
T ss_dssp ECCCSEECHHHHH--TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHH
T ss_pred eccCCeECchhhh--hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHH
Confidence 9999988765321 1122333444555555555555542
Q ss_pred -----------------CCCCeEecCCCCCcEEecC---CCc-EEEeccccch
Q 039720 796 -----------------CQPPIVHGDLKPSNVLLDH---DMV-AHVSDFGLAR 827 (973)
Q Consensus 796 -----------------~~~~ivHrDik~~NILl~~---~~~-~kl~Dfg~a~ 827 (973)
..+.++|+|+++.||+++. ++. +.|+||+.+.
T Consensus 171 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~ 223 (306)
T 3tdw_A 171 YLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAA 223 (306)
T ss_dssp HHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCE
T ss_pred HHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcC
Confidence 1235799999999999987 455 4799999875
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.91 E-value=4.1e-05 Score=84.70 Aligned_cols=77 Identities=10% Similarity=0.132 Sum_probs=55.7
Q ss_pred CcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCC--ceeEEeEeeecccCCCceEEEE
Q 039720 677 SSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRN--LIKIITICSSIDFKGADFKAIV 754 (973)
Q Consensus 677 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~~~~~~~~~~lv 754 (973)
...+.++.|....+|+.+. ++..+++|+.... ..+..|..+++.+.... +.+++.++... ....++|
T Consensus 44 ~~i~~l~gG~~n~~y~v~~--~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~----~g~~~lv 112 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDV--GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFS----ESLTYCI 112 (362)
T ss_dssp EEEEEEEECSSEEEEEEEE--TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESS----SSCEEEE
T ss_pred ceEEECCCCCcceEEEEEE--CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCC----CCCeEEE
Confidence 3456789999999999986 6889999987432 25788899998886543 45566554331 2568899
Q ss_pred EeeccCCCHH
Q 039720 755 YEYMQYGSVD 764 (973)
Q Consensus 755 ~e~~~~gsL~ 764 (973)
|||++|.++.
T Consensus 113 ~e~l~G~~l~ 122 (362)
T 3ovc_A 113 SRRAQGVTLQ 122 (362)
T ss_dssp EECCCSEETT
T ss_pred EEecCCCCcc
Confidence 9999986654
No 423
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.68 E-value=6.4e-05 Score=84.54 Aligned_cols=76 Identities=16% Similarity=0.133 Sum_probs=48.7
Q ss_pred CCccccccceeEEEEEECCCCcEEEEEEeecccc-------hhHHHHHHHHHHHHhcCC--CC-ceeEEeEeeecccCCC
Q 039720 679 SNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKK-------GATKSFVAECEALRNIRH--RN-LIKIITICSSIDFKGA 748 (973)
Q Consensus 679 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~e~~~l~~l~h--~n-iv~~~~~~~~~~~~~~ 748 (973)
.+.+|.|.++.||+++...+++.|+||....... ...+++..|.++++.+.. |. +.+++.+. .
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d-------~ 107 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD-------T 107 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE-------T
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc-------C
Confidence 4679999999999997755678999998653211 123456778888887742 33 34455431 1
Q ss_pred ceEEEEEeeccCC
Q 039720 749 DFKAIVYEYMQYG 761 (973)
Q Consensus 749 ~~~~lv~e~~~~g 761 (973)
+..++||||+++.
T Consensus 108 ~~~~lvmE~l~g~ 120 (397)
T 2olc_A 108 EMAVTVMEDLSHL 120 (397)
T ss_dssp TTTEEEECCCTTS
T ss_pred CccEEEEEeCCCc
Confidence 3457999999763
No 424
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.65 E-value=5e-05 Score=84.03 Aligned_cols=84 Identities=10% Similarity=-0.014 Sum_probs=53.6
Q ss_pred CCcc-ccccceeEEEEEEC--C----CCcEEEEEEeeccc---chhHHHHHHHHHHHHhcCC---CCceeEEeEeeeccc
Q 039720 679 SNRI-GKGSFGFVYKGNLG--E----DGMSVAVKVMNLDK---KGATKSFVAECEALRNIRH---RNLIKIITICSSIDF 745 (973)
Q Consensus 679 ~~~l-g~G~~g~V~~~~~~--~----~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h---~niv~~~~~~~~~~~ 745 (973)
.+.| +.|....+|+.... . ++..+++|+..... ......+..|+.+++.+.. -.+.+++.++....
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~- 103 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD- 103 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST-
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC-
Confidence 3567 88999999998752 0 16788899875432 1012456778888877742 34666777654321
Q ss_pred CCCceEEEEEeeccCCCHH
Q 039720 746 KGADFKAIVYEYMQYGSVD 764 (973)
Q Consensus 746 ~~~~~~~lv~e~~~~gsL~ 764 (973)
.....++||||++|.++.
T Consensus 104 -~~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 104 -VLGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp -TTSSCEEEEECCCCBCCC
T ss_pred -ccCCceEEEEecCCCChh
Confidence 113467899999986654
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.55 E-value=2.8e-05 Score=75.14 Aligned_cols=82 Identities=4% Similarity=-0.005 Sum_probs=36.2
Q ss_pred CCEEeeecccCCCCCCcccccCCCccceEecccc-cccchhhhhccc----cccceeeccCCc-ccccCCCCCCCCCccc
Q 039720 112 LETIVLSNNSFSGKIPTNLSRCFNLIDFWVHTNN-LVGEIQAIIGNW----LKIERLSLYGNQ-LTGQLPPSIGNLSALQ 185 (973)
Q Consensus 112 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~-~~~~~~~~~~~l----~~L~~L~L~~n~-l~~~~p~~~~~l~~L~ 185 (973)
|++||||++.++..--..+..+++|++|++++|. ++..--..+..+ ++|++|+|++|. +|..--..+.++++|+
T Consensus 63 L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~ 142 (176)
T 3e4g_A 63 IQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNLK 142 (176)
T ss_dssp EEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTCC
T ss_pred EeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCCC
Confidence 4444444444433222233344444444444442 333333334432 246666666653 4422222344555666
Q ss_pred EEEccCCc
Q 039720 186 TFDIAGNK 193 (973)
Q Consensus 186 ~L~L~~N~ 193 (973)
+|+|++|.
T Consensus 143 ~L~L~~c~ 150 (176)
T 3e4g_A 143 YLFLSDLP 150 (176)
T ss_dssp EEEEESCT
T ss_pred EEECCCCC
Confidence 66666553
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.40 E-value=7e-05 Score=72.38 Aligned_cols=83 Identities=11% Similarity=0.083 Sum_probs=56.3
Q ss_pred CCCEEEccCCCCCCCCCccccccCCCCEEeeeccc-CCCCCCcccccC----CCccceEecccc-cccchhhhhcccccc
Q 039720 87 FLRVINLANNSFHGQIPKEVGRLFRLETIVLSNNS-FSGKIPTNLSRC----FNLIDFWVHTNN-LVGEIQAIIGNWLKI 160 (973)
Q Consensus 87 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~-l~~~~p~~~~~l----~~L~~L~l~~n~-~~~~~~~~~~~l~~L 160 (973)
.|++|||+++.++..--..+.++++|++|+|++|. ++..--..++.+ ++|++|++++|. ++...-..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 57777777777764434456777778888888774 554333344443 367788888774 666666677788888
Q ss_pred ceeeccCCc
Q 039720 161 ERLSLYGNQ 169 (973)
Q Consensus 161 ~~L~L~~n~ 169 (973)
++|+|+++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 888888875
No 427
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.39 E-value=0.00026 Score=77.66 Aligned_cols=43 Identities=21% Similarity=0.258 Sum_probs=33.8
Q ss_pred HHHHHHHHHh----------cCCCCeEecCCCCCcEEecCCCcEEEeccccch
Q 039720 785 VASVIEYLHN----------HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 827 (973)
Q Consensus 785 i~~aL~~LH~----------~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~ 827 (973)
+..++++|++ .....++|+|+++.||+++.++.+.++||+.+.
T Consensus 199 ~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 199 GLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 4446666763 023489999999999999888899999999875
No 428
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.10 E-value=0.003 Score=67.73 Aligned_cols=75 Identities=17% Similarity=0.164 Sum_probs=56.7
Q ss_pred CCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcC---CCCceeEEeEeeecccCCCceEEEEE
Q 039720 679 SNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIR---HRNLIKIITICSSIDFKGADFKAIVY 755 (973)
Q Consensus 679 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~~~~~~lv~ 755 (973)
.+.++.|....+|+... ++..+++|+.... ....+..|...|+.+. ...+.+++.++.. ....++||
T Consensus 41 ~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~-----~g~~~lvm 110 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND--EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNS-----QGHSFLLL 110 (312)
T ss_dssp EEEECCSSSSEEEEEES--SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEEC-----SSEEEEEE
T ss_pred eEEeCCccceeeeEEEE--CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeec-----CCceEEEE
Confidence 45689999999999986 5778889987633 3566788988888774 3557777776543 36789999
Q ss_pred eeccCCCH
Q 039720 756 EYMQYGSV 763 (973)
Q Consensus 756 e~~~~gsL 763 (973)
||+++..+
T Consensus 111 e~l~G~~~ 118 (312)
T 3jr1_A 111 EALNKSKN 118 (312)
T ss_dssp ECCCCCCC
T ss_pred EeccCCCC
Confidence 99998754
No 429
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.04 E-value=0.0015 Score=69.65 Aligned_cols=78 Identities=19% Similarity=0.238 Sum_probs=55.8
Q ss_pred cCCcCCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCC---CceeEEeEeeecccCCCceE
Q 039720 675 EFSSSNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHR---NLIKIITICSSIDFKGADFK 751 (973)
Q Consensus 675 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~ 751 (973)
+....+.+|.|..+.||+.+. .+|+.|++|+...........+..|...|+.+.-. -+.+++++ +..
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l-~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~---------~~~ 85 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW---------DDR 85 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE---------ETT
T ss_pred CeEEEEecCCCCCeEEEEEEE-CCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec---------cCc
Confidence 344567799999999999998 58999999987654443445678899999888422 34455543 234
Q ss_pred EEEEeeccCCC
Q 039720 752 AIVYEYMQYGS 762 (973)
Q Consensus 752 ~lv~e~~~~gs 762 (973)
++||||++++.
T Consensus 86 ~lv~e~l~~~~ 96 (288)
T 3f7w_A 86 TLAMEWVDERP 96 (288)
T ss_dssp EEEEECCCCCC
T ss_pred eEEEEeecccC
Confidence 68999987764
No 430
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.95 E-value=0.00083 Score=61.83 Aligned_cols=60 Identities=17% Similarity=0.110 Sum_probs=31.1
Q ss_pred eecCCCCccc-cccCCCCCCCCccceEeccCCcCcCcCCCC-CCCCCccccccccCccccCCCC
Q 039720 555 ELDLSCNNLS-GQIPIHLGNLPFLEYLNLSYNHFEGKVPKK-GVFSNETRISLTGNEQFCGGLG 616 (973)
Q Consensus 555 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~l~~~~N~~~cg~~~ 616 (973)
.++.+++.++ ..+|..+. ++|+.|+|++|+|+...+.. ..+++++.+++.+|||.|++-.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~l 73 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCRL 73 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGGG
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCcc
Confidence 4455555554 23443321 24555555555555544433 2345556666777777777643
No 431
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=96.86 E-value=0.0023 Score=72.25 Aligned_cols=78 Identities=14% Similarity=0.199 Sum_probs=46.6
Q ss_pred CCCeEecCCCCCcEEecCCCcEEEeccccchhccCCCCccCCCCCcccccccc--cccccCcccccCCC---CCcccchH
Q 039720 797 QPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKG--TIGYIGPEYGMGGD---LSMTGDVY 871 (973)
Q Consensus 797 ~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~---~~~~sDvw 871 (973)
.+.++|+|+++.|||++.++ ++++||+.+..-.. ......... ...|++|+...... -....++.
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p---------~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPM---------GFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWIL 300 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECH---------HHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCch---------HHHHHHHHHHHHHHHHhcccccccccchHHHHHHHH
Confidence 34899999999999998876 99999998864211 000000011 12356665543211 11234555
Q ss_pred HHHHHHHHHHhCC
Q 039720 872 SFGILLLEMFTRR 884 (973)
Q Consensus 872 SlG~ll~elltg~ 884 (973)
.....+|+.+++.
T Consensus 301 ~~~~~~~~~y~~~ 313 (420)
T 2pyw_A 301 RTIEQTWNLFNKR 313 (420)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 7777778777653
No 432
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.79 E-value=0.0022 Score=69.51 Aligned_cols=161 Identities=13% Similarity=0.103 Sum_probs=86.0
Q ss_pred cccHHHHHHHhhcCCc-----CCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCC--cee
Q 039720 663 IVSYAELSKATKEFSS-----SNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRN--LIK 735 (973)
Q Consensus 663 ~~~~~~~~~~~~~y~~-----~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~ 735 (973)
.++.+++.....+|.+ .+.|+.|....+|+.... +| .+++|+.... .....+..|+.+++.+...+ +.+
T Consensus 6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~-~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~ 81 (322)
T 2ppq_A 6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTT-KD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPL 81 (322)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEES-SC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCC
T ss_pred cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeC-Cc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCc
Confidence 3455555555556654 235677888999999873 33 6889998642 12234556777776664222 222
Q ss_pred EEeEeeecc-cCCCceEEEEEeeccCCCHHH--------------HhhhcC-CC--c-----hhhHHH------------
Q 039720 736 IITICSSID-FKGADFKAIVYEYMQYGSVDD--------------WLHHTN-DK--L-----EVGKLN------------ 780 (973)
Q Consensus 736 ~~~~~~~~~-~~~~~~~~lv~e~~~~gsL~~--------------~l~~~~-~~--~-----~~~~~~------------ 780 (973)
++....... ....+..+++++|++|..+.. .+|... .+ + ....+.
T Consensus 82 ~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 161 (322)
T 2ppq_A 82 PLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADE 161 (322)
T ss_dssp BCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGG
T ss_pred ccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHh
Confidence 222100000 001245789999998764311 122110 00 0 000000
Q ss_pred ----HHHHHHHHHHHHHhc----CCCCeEecCCCCCcEEecCCCcEEEeccccch
Q 039720 781 ----IVIEVASVIEYLHNH----CQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 827 (973)
Q Consensus 781 ----i~~qi~~aL~~LH~~----~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~ 827 (973)
+...+...++++++. ...+++|+|+.+.||+++.++.+.++||+.+.
T Consensus 162 ~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 162 VEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp TSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011244556666532 13379999999999999887666899999875
No 433
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.71 E-value=0.00041 Score=68.35 Aligned_cols=117 Identities=12% Similarity=0.192 Sum_probs=53.7
Q ss_pred cCCCCCcEEEccCC-ccccC----CCcccccCCCCCcEEEccCCccccc----CCccccCCCCCCEEEccCCcccccC--
Q 039720 227 CNISSLDEAYLFKN-RFKGS----LPVCLGFNLPKLTVLVVAQNNLTGF----LPQSLSNASKLEWLELNENHFSGQV-- 295 (973)
Q Consensus 227 ~~l~~L~~L~L~~N-~l~~~----ip~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~-- 295 (973)
.+-++|++|+|++| +|... +-..+. .-+.|+.|+|++|.|... +.+.+..-+.|++|+|++|+|+...
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~-~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAAC-NSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHT-TCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHh-hCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 34456666777664 55311 111121 234566666666666532 2233344556666666666665322
Q ss_pred --cccccCcccccceecccccCCCCC-CCChhhhhhhcccccceeecccccc
Q 039720 296 --RINFNSLPNLSKLYLGRNNLGTRT-STDLDFITLLTNCSKLVKLGLVFNR 344 (973)
Q Consensus 296 --~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~~~~l~~l~~L~~L~l~~N~ 344 (973)
..++..-+.|++|+|++|....+. .........+...+.|+.|++++|.
T Consensus 117 ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCC
Confidence 123344445666666543221111 1111233344444555555555443
No 434
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.67 E-value=0.00053 Score=67.56 Aligned_cols=113 Identities=16% Similarity=0.150 Sum_probs=75.6
Q ss_pred ccCCCccceeccCCC-Ccccc----CCccccCCCCCcEEEccCCccccC----CCcccccCCCCCcEEEccCCccccc--
Q 039720 202 LGQLRNLNYLGTSEN-DFSGM----FPLSVCNISSLDEAYLFKNRFKGS----LPVCLGFNLPKLTVLVVAQNNLTGF-- 270 (973)
Q Consensus 202 ~~~L~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----ip~~~~~~l~~L~~L~Ls~N~l~~~-- 270 (973)
+.+-+.|++|+|++| .|... +-.++..-+.|+.|+|++|++... |-..+. .-+.|++|+|++|.|+..
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~-~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIE-TSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHH-HCSSCCEEECCSSBCCHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHh-cCCccCeEecCCCcCCHHHH
Confidence 345577888999885 77532 344566678899999999988732 222222 346789999999988743
Q ss_pred --CCccccCCCCCCEEEccCC---cccc----cCcccccCcccccceecccccC
Q 039720 271 --LPQSLSNASKLEWLELNEN---HFSG----QVRINFNSLPNLSKLYLGRNNL 315 (973)
Q Consensus 271 --~p~~~~~l~~L~~L~Ls~N---~l~~----~~~~~~~~l~~L~~L~L~~N~l 315 (973)
+.+.+..-+.|++|+|++| .+.. .+...+..-+.|+.|+++.|.+
T Consensus 116 ~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 116 ARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 3445666778999999865 3342 1334556667888888887764
No 435
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.51 E-value=0.0084 Score=65.01 Aligned_cols=143 Identities=15% Similarity=0.139 Sum_probs=78.3
Q ss_pred CccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCC--ceeEEeEeeecccCCCceEEEEEee
Q 039720 680 NRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRN--LIKIITICSSIDFKGADFKAIVYEY 757 (973)
Q Consensus 680 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~~~~~~~~~~lv~e~ 757 (973)
..++ |....||++.. .+|+.+++|+.+.... ....+..|..+++.+.... +.+++..-........+..+++|+|
T Consensus 32 ~~l~-g~~n~~y~v~~-~~g~~~vlK~~~~~~~-~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~ 108 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQD-EDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPS 108 (328)
T ss_dssp EEEC-CSSSEEEEECC-TTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEEC
T ss_pred Eeec-CcccceEEEEc-CCCCEEEEEEcCCCCC-CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEe
Confidence 3466 88889998865 3566899999863321 3455667888877774222 3333332000000113466789999
Q ss_pred ccCCCHH-----HH---------hhhc---CC------Cchhh----HHH---------------HHHHHHHHHHHHHhc
Q 039720 758 MQYGSVD-----DW---------LHHT---ND------KLEVG----KLN---------------IVIEVASVIEYLHNH 795 (973)
Q Consensus 758 ~~~gsL~-----~~---------l~~~---~~------~~~~~----~~~---------------i~~qi~~aL~~LH~~ 795 (973)
++|.++. .. +|.. .. ..... ... +...+...++.+.+.
T Consensus 109 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (328)
T 1zyl_A 109 VGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAH 188 (328)
T ss_dssp CCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9875321 11 1110 00 00000 000 011112223333321
Q ss_pred ----CCCCeEecCCCCCcEEecCCCcEEEeccccch
Q 039720 796 ----CQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 827 (973)
Q Consensus 796 ----~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~ 827 (973)
....++|+|+++.||+++ + .+.++||+.+.
T Consensus 189 ~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~ 222 (328)
T 1zyl_A 189 WREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR 222 (328)
T ss_dssp CCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred hhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence 233689999999999999 4 89999999875
No 436
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.32 E-value=0.011 Score=66.98 Aligned_cols=74 Identities=12% Similarity=0.048 Sum_probs=46.8
Q ss_pred CCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCc-eeEEeEeeecccCCCceEEEEEee
Q 039720 679 SNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNL-IKIITICSSIDFKGADFKAIVYEY 757 (973)
Q Consensus 679 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~~~lv~e~ 757 (973)
.+.|+.|-...+|++.....+..+++|+....... ......|..+++.+...++ .++++++ . . .+||||
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~-----~--~--G~v~e~ 182 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFF-----T--N--GRIEEF 182 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEE-----T--T--EEEEEC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEe-----C--C--eEEEEe
Confidence 45688899999999988543588999988532211 1123578888988875555 4455543 1 1 249999
Q ss_pred ccCCC
Q 039720 758 MQYGS 762 (973)
Q Consensus 758 ~~~gs 762 (973)
++|.+
T Consensus 183 I~G~~ 187 (458)
T 2qg7_A 183 MDGYA 187 (458)
T ss_dssp CCSEE
T ss_pred eCCcc
Confidence 98744
No 437
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.26 E-value=0.0059 Score=56.05 Aligned_cols=37 Identities=24% Similarity=0.237 Sum_probs=20.8
Q ss_pred CCCEEEccCCcccccCcccccCcccccceecccccCC
Q 039720 280 KLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNNLG 316 (973)
Q Consensus 280 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 316 (973)
+|++|+|++|+|+.+.+..|..+++|+.|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 3555555555555555555555555555666665553
No 438
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.25 E-value=0.0028 Score=67.99 Aligned_cols=71 Identities=10% Similarity=0.131 Sum_probs=43.2
Q ss_pred CCccccccceeEEEEEECCCCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCc-eeEEeEeeecccCCCceEEEEEee
Q 039720 679 SNRIGKGSFGFVYKGNLGEDGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNL-IKIITICSSIDFKGADFKAIVYEY 757 (973)
Q Consensus 679 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~~~lv~e~ 757 (973)
.+.|+.|....+|++ ..+++|+....... .....+|+.+++.+...++ .+++++. .+.-++++||
T Consensus 23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~-------~~~~~~v~e~ 88 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA------GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVD-------PATGVMVTRY 88 (301)
T ss_dssp CEEEESCSSEEEEEE------TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC-------TTTCCEEEEC
T ss_pred eeEcCCcccccccee------eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEE-------CCCCEEEEee
Confidence 677999999999998 46888988643211 1123457777776643233 3455432 1335689999
Q ss_pred c-cCCCH
Q 039720 758 M-QYGSV 763 (973)
Q Consensus 758 ~-~~gsL 763 (973)
+ +|.++
T Consensus 89 i~~g~~l 95 (301)
T 3dxq_A 89 IAGAQTM 95 (301)
T ss_dssp CTTCEEC
T ss_pred cCCCccC
Confidence 9 55443
No 439
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.17 E-value=0.02 Score=56.61 Aligned_cols=99 Identities=13% Similarity=0.122 Sum_probs=64.1
Q ss_pred CCHHHHhhhc-CCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEecCCCcEEEeccccchhccCCCCccCCC
Q 039720 761 GSVDDWLHHT-NDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLSHHPFLVAPE 839 (973)
Q Consensus 761 gsL~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 839 (973)
.+|.+.++.. ..+.++++|.++.|.+.+|.-.-....+ ..+=+.|..|++..+|.|.+.+ +.+.
T Consensus 33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~------------ 97 (229)
T 2yle_A 33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD------------ 97 (229)
T ss_dssp EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc------------
Confidence 4799998854 4677899999999999998776321111 1223456899999999988764 2110
Q ss_pred CCcccccccccccccCcccccCCCCCcccchHHHHHHHHHHHhC
Q 039720 840 GQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVYSFGILLLEMFTR 883 (973)
Q Consensus 840 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~ll~elltg 883 (973)
.....+.|||... ...+.+.=|||+|+++|.-+-=
T Consensus 98 --------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDy 132 (229)
T 2yle_A 98 --------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDY 132 (229)
T ss_dssp -----------------CCSS-SSSCHHHHHHHHHHHHHHHHTT
T ss_pred --------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhc
Confidence 0122466888753 4557888999999999998863
No 440
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.16 E-value=0.0084 Score=67.60 Aligned_cols=73 Identities=22% Similarity=0.261 Sum_probs=48.4
Q ss_pred CCccccccceeEEEEEECC-------CCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCc-eeEEeEeeecccCCCce
Q 039720 679 SNRIGKGSFGFVYKGNLGE-------DGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNL-IKIITICSSIDFKGADF 750 (973)
Q Consensus 679 ~~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~ 750 (973)
.+.|+.|....||++.... ++..+++|+.... ...+.+..|..+++.+...++ .++++.+ . +
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~-----~--~- 147 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIF-----S--G- 147 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEE-----T--T-
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEe-----C--C-
Confidence 4568889999999998742 2578999998432 112456679888888753344 4555542 1 1
Q ss_pred EEEEEeeccCCC
Q 039720 751 KAIVYEYMQYGS 762 (973)
Q Consensus 751 ~~lv~e~~~~gs 762 (973)
.+|+||++|.+
T Consensus 148 -g~v~e~l~G~~ 158 (429)
T 1nw1_A 148 -GRLEEYIPSRP 158 (429)
T ss_dssp -EEEECCCCEEE
T ss_pred -CEEEEEeCCcc
Confidence 27899998643
No 441
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.01 E-value=0.029 Score=60.80 Aligned_cols=31 Identities=29% Similarity=0.334 Sum_probs=27.1
Q ss_pred CCeEecCCCCCcEEecCC----CcEEEeccccchh
Q 039720 798 PPIVHGDLKPSNVLLDHD----MVAHVSDFGLARF 828 (973)
Q Consensus 798 ~~ivHrDik~~NILl~~~----~~~kl~Dfg~a~~ 828 (973)
+.++|||+.+.||+++.+ +.+.++||+.+..
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 479999999999999875 6899999998863
No 442
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=95.94 E-value=0.021 Score=62.96 Aligned_cols=139 Identities=14% Similarity=0.208 Sum_probs=79.4
Q ss_pred CCccccccceeEEEEEECC-------CCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCCc-eeEEeEeeecccCCCce
Q 039720 679 SNRIGKGSFGFVYKGNLGE-------DGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRNL-IKIITICSSIDFKGADF 750 (973)
Q Consensus 679 ~~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~ 750 (973)
.+.+..|-...+|++.... ++..|++|+.... ........+|..+++.+.-.++ .++++++. +
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~-------~- 125 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFP-------E- 125 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEET-------T-
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcC-------C-
Confidence 4567778899999998742 3578999986322 1234556689988887753233 44555421 1
Q ss_pred EEEEEeeccCCCHHHH-----------------hhhcC----C-C--chhhHHHHHHHHH-------------------H
Q 039720 751 KAIVYEYMQYGSVDDW-----------------LHHTN----D-K--LEVGKLNIVIEVA-------------------S 787 (973)
Q Consensus 751 ~~lv~e~~~~gsL~~~-----------------l~~~~----~-~--~~~~~~~i~~qi~-------------------~ 787 (973)
.+||||++|.++..- +|... . . ...++.++..++. .
T Consensus 126 -g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~ 204 (379)
T 3feg_A 126 -GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKD 204 (379)
T ss_dssp -EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHH
T ss_pred -ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHH
Confidence 289999987554310 11111 0 0 1123334443332 1
Q ss_pred HHHHHHh----c-CCCCeEecCCCCCcEEecCC----CcEEEeccccch
Q 039720 788 VIEYLHN----H-CQPPIVHGDLKPSNVLLDHD----MVAHVSDFGLAR 827 (973)
Q Consensus 788 aL~~LH~----~-~~~~ivHrDik~~NILl~~~----~~~kl~Dfg~a~ 827 (973)
.++.|.+ . ....++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 205 ~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 205 EMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 2333322 1 12379999999999999876 789999999875
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=95.70 E-value=0.014 Score=64.58 Aligned_cols=74 Identities=11% Similarity=0.114 Sum_probs=43.0
Q ss_pred CCccccccceeEEEEEECC--------CCcEEEEEEeecccchhHHHHHHHHHHHHhcCCCC-ceeEEeEeeecccCCCc
Q 039720 679 SNRIGKGSFGFVYKGNLGE--------DGMSVAVKVMNLDKKGATKSFVAECEALRNIRHRN-LIKIITICSSIDFKGAD 749 (973)
Q Consensus 679 ~~~lg~G~~g~V~~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~~~ 749 (973)
.+.++.|....+|++.... .+..+++|+....... ......|..+++.+...+ +.++++..
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--------- 107 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF--------- 107 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE---------
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec---------
Confidence 3567888889999998742 1368889987543221 112356777777775333 33555431
Q ss_pred eEEEEEeeccCCC
Q 039720 750 FKAIVYEYMQYGS 762 (973)
Q Consensus 750 ~~~lv~e~~~~gs 762 (973)
.-++||||++|.+
T Consensus 108 ~~~~v~e~i~G~~ 120 (369)
T 3c5i_A 108 NGGRIEEWLYGDP 120 (369)
T ss_dssp TTEEEEECCCSEE
T ss_pred CCcEEEEEecCCc
Confidence 1257999998753
No 444
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=94.97 E-value=0.067 Score=58.11 Aligned_cols=31 Identities=19% Similarity=0.341 Sum_probs=27.6
Q ss_pred CCeEecCCCCCcEEecCCCcEEEeccccchh
Q 039720 798 PPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 828 (973)
Q Consensus 798 ~~ivHrDik~~NILl~~~~~~kl~Dfg~a~~ 828 (973)
..++|+|+.+.||+++.++.+.++||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 3799999999999999888899999987753
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=93.78 E-value=0.16 Score=56.03 Aligned_cols=29 Identities=24% Similarity=0.325 Sum_probs=26.3
Q ss_pred CeEecCCCCCcEEecCC------CcEEEeccccch
Q 039720 799 PIVHGDLKPSNVLLDHD------MVAHVSDFGLAR 827 (973)
Q Consensus 799 ~ivHrDik~~NILl~~~------~~~kl~Dfg~a~ 827 (973)
.++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 245 v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred eEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 68999999999999877 789999999875
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=92.21 E-value=0.19 Score=56.09 Aligned_cols=74 Identities=11% Similarity=0.079 Sum_probs=46.6
Q ss_pred CCccccccceeEEEEEECCC-------CcEEEEEEeecccchhHHHHHHHHHHHHhcCCCC-ceeEEeEeeecccCCCce
Q 039720 679 SNRIGKGSFGFVYKGNLGED-------GMSVAVKVMNLDKKGATKSFVAECEALRNIRHRN-LIKIITICSSIDFKGADF 750 (973)
Q Consensus 679 ~~~lg~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~~~~ 750 (973)
.+.+..|-...+|++..... +..|++|+...... ......+|..+++.+.-.+ ..++++.+ .
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~-~~idR~~E~~~l~~L~~~gi~P~l~~~~---------~ 144 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVG-KFYDSKVELDVFRYLSNINIAPNIIADF---------P 144 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE---------T
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcc-hhcCHHHHHHHHHHHHhcCCCCCEEEEc---------C
Confidence 45677788999999987421 67899998743221 1223456777777775323 34444421 1
Q ss_pred EEEEEeeccCCC
Q 039720 751 KAIVYEYMQYGS 762 (973)
Q Consensus 751 ~~lv~e~~~~gs 762 (973)
-+.|+||++|.+
T Consensus 145 ~~~I~efI~G~~ 156 (424)
T 3mes_A 145 EGRIEEFIDGEP 156 (424)
T ss_dssp TEEEEECCCSEE
T ss_pred CCEEEEEeCCcc
Confidence 268899999865
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=87.79 E-value=1 Score=49.97 Aligned_cols=30 Identities=23% Similarity=0.425 Sum_probs=25.0
Q ss_pred CeEecCCCCCcEEe------cCCCcEEEeccccchh
Q 039720 799 PIVHGDLKPSNVLL------DHDMVAHVSDFGLARF 828 (973)
Q Consensus 799 ~ivHrDik~~NILl------~~~~~~kl~Dfg~a~~ 828 (973)
.++|+|+.+.||++ +++..++++||-.|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 36799999999999 4567899999988753
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=68.55 E-value=9.2 Score=37.64 Aligned_cols=117 Identities=15% Similarity=0.216 Sum_probs=75.3
Q ss_pred CCCCceeEEeEeeecccCCCceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCCeEecCCCCC
Q 039720 729 RHRNLIKIITICSSIDFKGADFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIEYLHNHCQPPIVHGDLKPS 808 (973)
Q Consensus 729 ~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik~~ 808 (973)
.||+.++. .+- .+.+.+.+.++.-+.+--+.-+. ......+++++.+|+....++++. +|--+.|+
T Consensus 43 ~~~~Fl~~-~I~-----e~eD~v~~~y~~~~~~~~f~~ik---~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~ 108 (215)
T 4ann_A 43 HSPYFIDA-ELT-----ELRDSFQIHYDINDNHTPFDNIK---SFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPD 108 (215)
T ss_dssp CCTTBCCE-EEE-----ECSSEEEEEECCCTTSEEGGGGG---GSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGG
T ss_pred cCCcccce-EEE-----EcccEEEEEEEcCcccCCHHHHH---hcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecc
Confidence 58888865 231 22356666666544222222232 234567889999999988766654 78889999
Q ss_pred cEEecCCCcEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchH-HHHHHHHHHHhCCCCC
Q 039720 809 NVLLDHDMVAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVY-SFGILLLEMFTRRRPT 887 (973)
Q Consensus 809 NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvw-SlG~ll~elltg~~Pf 887 (973)
||+++.++.+++.-.|+-..+ +|. .++ ..|.| ..=|++..+++++..|
T Consensus 109 NL~f~~~~~p~i~~RGik~~l-------------------------~P~-----~~~-ee~fL~qyKAliiall~~K~~F 157 (215)
T 4ann_A 109 ELFFTRDGLPIAKTRGLQNVV-------------------------DPL-----PVS-EAEFLTRYKALVICAFNEKQSF 157 (215)
T ss_dssp GEEECTTSCEEESCCEETTTB-------------------------SCC-----CCC-HHHHHHHHHHHHHHHHCTTCCH
T ss_pred eEEEcCCCCEEEEEccCccCC-------------------------CCC-----CCC-HHHHHHHHHHHHHHHHcCCCCH
Confidence 999999999999877764322 221 111 22333 3667888899999998
Q ss_pred CCC
Q 039720 888 DNM 890 (973)
Q Consensus 888 ~~~ 890 (973)
...
T Consensus 158 e~l 160 (215)
T 4ann_A 158 DAL 160 (215)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 449
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=66.86 E-value=0.71 Score=52.18 Aligned_cols=63 Identities=14% Similarity=0.087 Sum_probs=18.9
Q ss_pred CcCCccccccceeEEEEEECCCCcEEEE------EEeeccc--chhHHHHHHHHHHHHhcCCCCceeEEeEeee
Q 039720 677 SSSNRIGKGSFGFVYKGNLGEDGMSVAV------KVMNLDK--KGATKSFVAECEALRNIRHRNLIKIITICSS 742 (973)
Q Consensus 677 ~~~~~lg~G~~g~V~~~~~~~~~~~vav------K~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 742 (973)
.+.+++| ||+||+|.+.....+||| |..+... ......+.+|..+++...|||+++..++...
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 4456776 999999999765678898 6654322 2223467888888999999999998876543
No 450
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=53.00 E-value=13 Score=36.75 Aligned_cols=115 Identities=10% Similarity=0.039 Sum_probs=73.6
Q ss_pred CCCCceeEEeEeeecccCCCceEEEEEeeccCCCHHHHhhhcCCCchhhHHHHHHHHHHHHH-HHHhcCCCCeEecCCCC
Q 039720 729 RHRNLIKIITICSSIDFKGADFKAIVYEYMQYGSVDDWLHHTNDKLEVGKLNIVIEVASVIE-YLHNHCQPPIVHGDLKP 807 (973)
Q Consensus 729 ~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~i~~qi~~aL~-~LH~~~~~~ivHrDik~ 807 (973)
.||+. + ..+- .+.+.+.+.++.-+++.-+..++ ......+++++..|+.... ++++ -+|--+.|
T Consensus 48 ~~~~f-~-~~I~-----~~eD~~~i~y~~~~~~~~f~~i~---~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P 112 (219)
T 4ano_A 48 VDPCI-V-RDID-----VSEDEVKVVIKPPSSFLTFAAIR---KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCP 112 (219)
T ss_dssp SCSSS-E-EEEE-----ECSSEEEEEEECCTTCEEHHHHH---TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCG
T ss_pred cCCCC-C-eEEE-----EeCCEEEEEEEcCcccCcHHHHH---hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeC
Confidence 57887 3 2221 23467777777654443333332 3455778888998888776 5654 47888999
Q ss_pred CcEEecCCCcEEEeccccchhccCCCCccCCCCCcccccccccccccCcccccCCCCCcccchH-HHHHHHHHHHhCCCC
Q 039720 808 SNVLLDHDMVAHVSDFGLARFLSHHPFLVAPEGQSSSIEMKGTIGYIGPEYGMGGDLSMTGDVY-SFGILLLEMFTRRRP 886 (973)
Q Consensus 808 ~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvw-SlG~ll~elltg~~P 886 (973)
+||+++.++.+++.-.|+-.. ++|.-+ + ..|.| ..=|++..++.++..
T Consensus 113 ~NL~f~~~~~p~i~hRGi~~~-------------------------lpP~e~-----~-ee~fl~qyKali~all~~K~~ 161 (219)
T 4ano_A 113 ENLMFNRALEPFFLHVGVKES-------------------------LPPDEW-----D-DERLLREVKATVLALTEGEYR 161 (219)
T ss_dssp GGEEECTTCCEEESCCEETTT-------------------------BSSCSC-----C-HHHHHHHHHHHHHHHTTCSSC
T ss_pred ceEEEeCCCcEEEEEcCCccc-------------------------CCCCCC-----C-HHHHHHHHHHHHHHHHcCCCC
Confidence 999999999999987776432 223211 1 22333 356778888888888
Q ss_pred CCC
Q 039720 887 TDN 889 (973)
Q Consensus 887 f~~ 889 (973)
|..
T Consensus 162 Fe~ 164 (219)
T 4ano_A 162 FDE 164 (219)
T ss_dssp HHH
T ss_pred HHH
Confidence 753
No 451
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=38.42 E-value=61 Score=27.33 Aligned_cols=44 Identities=18% Similarity=0.123 Sum_probs=22.1
Q ss_pred CCCcccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEccCC
Q 039720 245 SLPVCLGFNLPKLTVLVVAQNNLTGFLPQSLSNASKLEWLELNEN 289 (973)
Q Consensus 245 ~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 289 (973)
.|....|.++++|+.+.+..+ ++.+-..+|.++.+|+.+.+...
T Consensus 10 ~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 10 GMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp SSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred EecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 344444445555555555443 33344455666666666655543
No 452
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=37.89 E-value=34 Score=28.96 Aligned_cols=49 Identities=14% Similarity=0.162 Sum_probs=39.6
Q ss_pred CcccccCCccccCCCCCCEEEccCCcccccCcccccCcccccceeccccc
Q 039720 265 NNLTGFLPQSLSNASKLEWLELNENHFSGQVRINFNSLPNLSKLYLGRNN 314 (973)
Q Consensus 265 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 314 (973)
..++.+-..+|.++++|+.+.|-.+ ++.+...+|.++.+|+.+.+....
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~~ 54 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGED 54 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCSC
T ss_pred CccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCCC
Confidence 3456666788999999999999865 666778899999999999987653
No 453
>3ox7_P MH027; urokinase-type plasminogen activator, peptidyl inhibitor, pharmacophore, hydrolase, hydrolase-hydrolase inhibitor COM; HET: PG4; 1.58A {Homo sapiens} PDB: 3oy5_P 3oy6_P
Probab=24.34 E-value=21 Score=20.05 Aligned_cols=9 Identities=33% Similarity=1.228 Sum_probs=7.1
Q ss_pred CCCceeeeE
Q 039720 48 NLCQWTGVT 56 (973)
Q Consensus 48 ~~c~w~gv~ 56 (973)
..|+|+|..
T Consensus 6 gacswrgle 14 (23)
T 3ox7_P 6 GACSWRGLE 14 (26)
T ss_pred cccccccch
Confidence 479999874
Done!