BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039722
(196 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P74615|Y1483_SYNY3 Uncharacterized protein sll1483 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1483 PE=4 SV=1
Length = 180
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
Query: 65 MIEMLPEDLAFTIFVPSVKAFDRELKLQVNDSLVGDNVNNTYAILSRILGFSAVPRTLSS 124
++E L + FT+F P+ AF V L+ +N + L +IL + VP +++
Sbjct: 70 LVEALSAEGPFTVFAPTNDAFAALPAGTVESLLLPENKDK----LVKILTYHVVPGKITA 125
Query: 125 IMVPFGEEISYDSLSGLTLYISKSSDGKLLVNRVESERLDLKKGKIVIHIMDGVIM 180
V GE SL+G L K DGK+ VN+ D+ VIH++D VI+
Sbjct: 126 AQVQSGE---VASLAGEALTF-KVKDGKVKVNKATVISADVDASNGVIHVIDQVIL 177
>sp|Q8R4U0|STAB2_MOUSE Stabilin-2 OS=Mus musculus GN=Stab2 PE=1 SV=1
Length = 2559
Score = 40.0 bits (92), Expect = 0.010, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 16/138 (11%)
Query: 47 SIHGEVYRREEIGKFAEMMIEMLPEDLA----FTIFVPSVKAFDRELKLQVNDSLVGDNV 102
SIH E+ + ++ + E ++LA FT+FVPS +F+ E KL+V D
Sbjct: 1605 SIHSELPKNPSTSQYFFQLQEHAVQELAGPGPFTVFVPSSDSFNSESKLKVWDK------ 1658
Query: 103 NNTYAILSRILGFSAVPRTLSSIMVPFGEEI-SYDSLSGLTLYISKSSDGKLLVNRVESE 161
++S+IL + V +++ + I S +L G + IS S D L+ + +
Sbjct: 1659 ---QGLMSQILRYHVV--ACQQLLLENLKVITSATTLQGEPISISVSQDTVLINKKAKVL 1713
Query: 162 RLDLKKGKIVIHIMDGVI 179
D+ VIH++D ++
Sbjct: 1714 SSDIISTNGVIHVIDTLL 1731
>sp|Q84KJ6|AMT31_ORYSJ Ammonium transporter 3 member 1 OS=Oryza sativa subsp. japonica
GN=AMT3-1 PE=2 SV=1
Length = 498
Score = 32.3 bits (72), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 16 ICFVLVVVSVCCLSILIFSMLRLP--DISLGSTSIHGE 51
IC+ +VV S+ CL++ LR+P ++++G ++HGE
Sbjct: 419 ICWNVVVTSLVCLAVRAVVPLRMPEEELAIGDDAVHGE 456
>sp|Q15562|TEAD2_HUMAN Transcriptional enhancer factor TEF-4 OS=Homo sapiens GN=TEAD2 PE=1
SV=2
Length = 447
Score = 32.3 bits (72), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 129 FGEEISYDSLSGLTLYISKS--SDGKLLVNRVESERLDLKKGKIVIHIM 175
+G Y+SL +TL S S GK +V +VE+ER L+ G+ V ++
Sbjct: 327 YGVSSQYESLEHMTLTCSSKVCSFGKQVVEKVETERAQLEDGRFVYRLL 375
>sp|Q15063|POSTN_HUMAN Periostin OS=Homo sapiens GN=POSTN PE=1 SV=2
Length = 836
Score = 32.0 bits (71), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 61/126 (48%), Gaps = 10/126 (7%)
Query: 65 MIEMLPEDLAFTIFVPSVKAFDRELKLQVNDSLVGDNVNNTYAILSRILGFSAVPRTLSS 124
++E L D FT+F P+ +AF++ L V + ++GD V + + IL ++
Sbjct: 259 ILEALGRDGHFTLFAPTNEAFEK-LPRGVLERIMGDKVASEALMKYHILNTLQCSESIMG 317
Query: 125 IMVPFGEEISYDSLSGLTLYISKSSDGKLLVNRVES-ERLDLKKGKIVIHIMDGVIMDAE 183
V +++L G T+ I D + VN ++ + D+ VIH++D V++
Sbjct: 318 GAV-------FETLEGNTIEIGCDGD-SITVNGIKMVNKKDIVTNNGVIHLIDQVLIPDS 369
Query: 184 FEQSVQ 189
+Q ++
Sbjct: 370 AKQVIE 375
>sp|Q2M2E5|CE064_HUMAN Uncharacterized protein C5orf64 OS=Homo sapiens GN=C5orf64 PE=2
SV=2
Length = 130
Score = 31.2 bits (69), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 19 VLVVVSVCCLSILIFSMLRLPDISLGSTSIHGEVYRREEIGKFAEMMIEMLPEDLAFTIF 78
+L + +CCL L ++ LG T++H R I + + P+DL ++
Sbjct: 1 MLAPLFLCCLRNLFRKLISFQPPQLGRTNMHYSKLPRTAIETEFKQNVGPPPKDLTAEVY 60
Query: 79 VPSVKA 84
PS+K+
Sbjct: 61 FPSIKS 66
>sp|Q8WWQ8|STAB2_HUMAN Stabilin-2 OS=Homo sapiens GN=STAB2 PE=1 SV=3
Length = 2551
Score = 30.4 bits (67), Expect = 7.7, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 62/138 (44%), Gaps = 16/138 (11%)
Query: 47 SIHGEVYRREEIGKFAEMMIEMLPEDLA----FTIFVPSVKAFDRELKLQVNDSLVGDNV 102
SI+ E+ + + ++ + E +DL FT+F P AFD E +++ D
Sbjct: 1598 SIYQELPKNPKTSQYFFQLQEHFVKDLVGPGPFTVFAPLSAAFDEEARVKDWDK------ 1651
Query: 103 NNTYAILSRILGFSAVPRTLSSIMVPFGEEIS-YDSLSGLTLYISKSSDGKLLVNRVESE 161
Y ++ ++L + V +++ + IS SL G + IS S + N+ +
Sbjct: 1652 ---YGLMPQVLRYHVV--ACHQLLLENLKLISNATSLQGEPIVISVSQSTVYINNKAKII 1706
Query: 162 RLDLKKGKIVIHIMDGVI 179
D+ ++HI+D ++
Sbjct: 1707 SSDIISTNGIVHIIDKLL 1724
>sp|Q62009|POSTN_MOUSE Periostin OS=Mus musculus GN=Postn PE=1 SV=2
Length = 838
Score = 30.4 bits (67), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 61/126 (48%), Gaps = 10/126 (7%)
Query: 65 MIEMLPEDLAFTIFVPSVKAFDRELKLQVNDSLVGDNVNNTYAILSRILGFSAVPRTLSS 124
++E L D FT+F P+ +AF++ L V + ++GD V + + IL ++
Sbjct: 261 LLESLGRDGHFTLFAPTNEAFEK-LPRGVLERIMGDKVASEALMKYHILNTLQCSEAITG 319
Query: 125 IMVPFGEEISYDSLSGLTLYISKSSDGKLLVNRVES-ERLDLKKGKIVIHIMDGVIMDAE 183
V ++++ G T+ I D + +N ++ + D+ VIH++D V++
Sbjct: 320 GAV-------FETMEGNTIEIGCEGD-SISINGIKMVNKKDIVTKNGVIHLIDEVLIPDS 371
Query: 184 FEQSVQ 189
+Q ++
Sbjct: 372 AKQVIE 377
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.139 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,667,440
Number of Sequences: 539616
Number of extensions: 2533941
Number of successful extensions: 6451
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 6445
Number of HSP's gapped (non-prelim): 15
length of query: 196
length of database: 191,569,459
effective HSP length: 111
effective length of query: 85
effective length of database: 131,672,083
effective search space: 11192127055
effective search space used: 11192127055
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)